1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR000EHK

doi:10.17989/ENCSR000EHK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
STAT1
Biosample summary
Homo sapiens K562 treated with Interferon gamma for 30 minutes
Biosample Type
cell line
Replication type
isogenic
Description
STAT1 ChIP-seq on human K562 treated with IFNg30
Treatments
Interferon gamma (UniProtKB:P01579) for 30 minutes
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 29, 2011
Date released
October 29, 2011
Annotation (gkmsvm-model)
Submitter comment
Cross-correlation metrics are too poor to permit further analysis for GRCh38.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell line treated with Interferon gamma for 30 minutesENCBS788AAAENCAB000ALFENCLB209AUJ
21Homo sapiens K562 cell line treated with Interferon gamma for 30 minutesENCBS788AAAENCAB000ALFENCLB209AUI

Files

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