Experiment summary for ENCSR000EFI
doi:10.17989/ENCSR000EFI
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens IMR-90
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human IMR90 produced by the Snyder lab
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- May 14, 2012
- Date released
- May 14, 2012
- Annotation (gkmsvm-model)
- Annotation (physical modeling)
- Annotation (BPNet-model)
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens IMR-90 cell line | ENCBS379ENC | ENCAB000AFQ | ENCLB209AFD |
2 | 1 | Homo sapiens IMR-90 cell line | ENCBS379ENC | ENCAB000AFQ | ENCLB209AFC |