Experiment summary for ENCSR000EAQ
doi:10.17989/ENCSR000EAQ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- RELA
- Biosample summary
- Homo sapiens GM15510 treated with 25 ng/mL tumor necrosis factor for 6 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RELA ChIP-seq on human GM15510 treated with TNFa
- Treatments
- 25 ng/mL tumor necrosis factor (UniProtKB:P01375) for 6 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- October 29, 2011
- Date released
- October 29, 2011
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 4 | 1 | Homo sapiens GM15510 cell line treated with 25 ng/mL tumor necrosis factor for 6 hours | ENCBS497ENC | ENCAB000AJG | ENCLB209AFB |
| 5 | 1 | Homo sapiens GM15510 cell line treated with 25 ng/mL tumor necrosis factor for 6 hours | ENCBS497ENC | ENCAB000AJG | ENCLB209AVN |
| 3 | 1 | Homo sapiens GM15510 cell line treated with 25 ng/mL tumor necrosis factor for 6 hours | ENCBS497ENC | ENCAB000AJG | ENCLB209AVO |