Experiment summary for ENCSR000DYM

doi:10.17989/ENCSR000DYM

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
RELA
Biosample summary
Homo sapiens GM10847 treated with 25 ng/mL tumor necrosis factor for 6 hours
Biosample Type
cell line
Replication type
isogenic
Description
RELA ChIP-seq on human GM10847 treated with TNFa
Treatments
25 ng/mL tumor necrosis factor (UniProtKB:P01375) for 6 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 29, 2011
Date released
October 29, 2011
Submitter comment
ENCODE4 pipeline run failed at chip.align step.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
51Homo sapiens GM10847 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS186AAAENCAB000AJGENCLB209AMG
31Homo sapiens GM10847 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS186AAAENCAB000AJGENCLB209AMJ
41Homo sapiens GM10847 cell line treated with 25 ng/mL tumor necrosis factor for 6 hoursENCBS186AAAENCAB000AJGENCLB209AMF