Experiment summary for ENCSR000DXY

doi:10.17989/ENCSR000DXY

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K4me3
Biosample summary
Homo sapiens WI38 stably expressing RAF1 treated with 20 nM afimoxifene for 72 hours
Biosample Type
cell line
Replication type
isogenic
Description
H3K4me3 ChIP-seq on human WI-38 treated with 4-hydroxy-tamoxifen at 20nM for 72 hours
Treatments
20 nM afimoxifene (CHEBI:44616) for 72 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
November 17, 2011
Submitter comment
Replicate 2,1 of this experiment was previously attributed to biosample ENCBS607ENC and replicate 1,1 of this experiment was previously attributed to biosample ENCBS607ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Homo sapiens WI38 cell line stably expressing RAF1 treated with 20 nM afimoxifene for 72 hoursENCBS601ENJENCGM611PKVENCAB000ARBENCLB799XHI
11Homo sapiens WI38 cell line stably expressing RAF1 treated with 20 nM afimoxifene for 72 hoursENCBS715PYAENCGM611PKVENCAB000ARBENCLB200KHO