Experiment summary for ENCSR000DXY
doi:10.17989/ENCSR000DXY
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me3
- Biosample summary
- Homo sapiens WI38 stably expressing RAF1 treated with 20 nM afimoxifene for 72 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- H3K4me3 ChIP-seq on human WI-38 treated with 4-hydroxy-tamoxifen at 20nM for 72 hours
- Treatments
- 20 nM afimoxifene (CHEBI:44616) for 72 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- June 25, 2011
- Date released
- November 17, 2011
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS607ENC and replicate 1,1 of this experiment was previously attributed to biosample ENCBS607ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
2 | 1 | Homo sapiens WI38 cell line stably expressing RAF1 treated with 20 nM afimoxifene for 72 hours | ENCBS601ENJ | ENCGM611PKV | ENCAB000ARB | ENCLB799XHI |
1 | 1 | Homo sapiens WI38 cell line stably expressing RAF1 treated with 20 nM afimoxifene for 72 hours | ENCBS715PYA | ENCGM611PKV | ENCAB000ARB | ENCLB200KHO |