Experiment summary for ENCSR000DXP
doi:10.17989/ENCSR000DXP
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K27me3
- Biosample summary
- Homo sapiens SK-N-SH treated with 6 μM all-trans-retinoic acid for 48 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- H3K27me3 ChIP-seq on human SK-N-SH treated with 6uM retinoic acid for 48 hours
- Treatments
- 6 μM all-trans-retinoic acid (CHEBI:15367) for 48 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- February 11, 2011
- Date released
- February 11, 2011
- Reference Epigenome
- ENCSR192FFL
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS404ENC and replicate 1,1 of this experiment was previously attributed to biosample ENCBS404ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens SK-N-SH cell line treated with 6 μM all-trans-retinoic acid for 48 hours | ENCBS606NNZ | ENCAB000ANB | ENCLB023YVU |
1 | 1 | Homo sapiens SK-N-SH cell line treated with 6 μM all-trans-retinoic acid for 48 hours | ENCBS172JMM | ENCAB000ANB | ENCLB620VEG |