Experiment summary for ENCSR000DXP

doi:10.17989/ENCSR000DXP

Summary

Status
released
Assay
ChIP-seq (Histone ChIP-seq)
Target
H3K27me3
Biosample summary
Homo sapiens SK-N-SH treated with 6 μM all-trans-retinoic acid for 48 hours
Biosample Type
cell line
Replication type
isogenic
Description
H3K27me3 ChIP-seq on human SK-N-SH treated with 6uM retinoic acid for 48 hours
Treatments
6 μM all-trans-retinoic acid (CHEBI:15367) for 48 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
February 11, 2011
Date released
February 11, 2011
Reference Epigenome
ENCSR192FFL 
Submitter comment
Replicate 2,1 of this experiment was previously attributed to biosample ENCBS404ENC and replicate 1,1 of this experiment was previously attributed to biosample ENCBS404ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens SK-N-SH cell line treated with 6 μM all-trans-retinoic acid for 48 hoursENCBS606NNZENCAB000ANBENCLB023YVU
11Homo sapiens SK-N-SH cell line treated with 6 μM all-trans-retinoic acid for 48 hoursENCBS172JMMENCAB000ANBENCLB620VEG