1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. fibroblast of mammary gland

Experiment summary for ENCSR000DUU

doi:10.17989/ENCSR000DUU

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens fibroblast of mammary gland female
Biosample Type
primary cell
Replication type
isogenic
Description
CTCF ChIP-seq on human HMF
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
March 17, 2011
Date released
March 17, 2011
Reference Epigenome
ENCSR201EOI 
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens female fibroblast of mammary gland primary cellENCBS399FWJENCAB000AFPENCLB027LHT
21Homo sapiens female fibroblast of mammary gland primary cellENCBS311AAAENCAB000AFPENCLB906ZLW

Files

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Output type
Replicates

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