Experiment summary for ENCSR000DSD
doi:10.17989/ENCSR000DSD
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me3
- Biosample summary
- Homo sapiens cardiac myoblast originated from H7 treated with 10 ng/mL Bone morphogenetic protein 4 for 9 days, 5 ng/mL Fibroblast growth factor 2 for 9 days, 6 ng/mL Activin A for 9 days
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Description
- H3K4me3 ChIP-seq on human H7-hESC differentiated 9 days
- Treatments
- 10 ng/mL Bone morphogenetic protein 4 (UniProtKB:P12644) for 9 days, 5 ng/mL Fibroblast growth factor 2 (UniProtKB:P09038) for 9 days, 6 ng/mL Activin A (CHEBI:81351) for 9 days
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- June 25, 2011
- Date released
- February 16, 2012
- Treatment Time Series
- ENCSR831IZS
- Reference Epigenome
- ENCSR472YCH
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS297AAA and replicate 1,1 of this experiment was previously attributed to biosample ENCBS297AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Tags
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens female embryo cardiac myoblast in vitro differentiated cells originated from H7 treated with 10 ng/mL Bone morphogenetic protein 4 for 9 days, 5 ng/mL Fibroblast growth factor 2 for 9 days, 6 ng/mL Activin A for 9 days | ENCBS152EVQ | ENCAB000ARB | ENCLB068NBV |
| 1 | 1 | Homo sapiens female embryo cardiac myoblast in vitro differentiated cells originated from H7 treated with 10 ng/mL Bone morphogenetic protein 4 for 9 days, 5 ng/mL Fibroblast growth factor 2 for 9 days, 6 ng/mL Activin A for 9 days | ENCBS303BHK | ENCAB000ARB | ENCLB105UQY |