Experiment summary for ENCSR000DRP
doi:10.17989/ENCSR000DRP
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens GM12873
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human GM12873
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- June 25, 2011
- Date released
- January 17, 2012
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS217AAA and replicate 3,1 of this experiment was previously attributed to biosample ENCBS217AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens GM12873 cell line | ENCBS800BFZ | ENCAB000AFP | ENCLB045FXH |
1 | 1 | Homo sapiens GM12873 cell line | ENCBS217AAA | ENCAB000AFP | ENCLB241QDX |
3 | 1 | Homo sapiens GM12873 cell line | ENCBS502JSQ | ENCAB000AFP | ENCLB915VMM |