Experiment summary for ENCSR000DRP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens GM12873
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human GM12873
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Submitter comment
Replicate 2,1 of this experiment was previously attributed to biosample ENCBS217AAA and replicate 3,1 of this experiment was previously attributed to biosample ENCBS217AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21GM12873 cell lineENCBS800BFZENCAB000AFPENCLB045FXH
11GM12873 cell lineENCBS217AAAENCAB000AFPENCLB241QDX
31GM12873 cell lineENCBS502JSQENCAB000AFPENCLB915VMM