Experiment summary for ENCSR000DRE
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens GM12865
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human GM12865
- Nucleic acid type
- DNA
- Lysis method
- see document
- Extraction method
- see document
- Fragmentation methods
- see document
- Size selection method
- see document
- Strand specificity
- Non-strand-specific
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS209AAA and replicate 3,1 of this experiment was previously attributed to biosample ENCBS209AAA and replicate 1,1 of this experiment was previously attributed to biosample ENCBS209AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | GM12865 cell line | ENCBS159QLB | ENCAB000AFP | ENCLB731XKT |
| 3 | 1 | GM12865 cell line | ENCBS239KGS | ENCAB000AFP | ENCLB590VKG |
| 1 | 1 | GM12865 cell line | ENCBS356ARP | ENCAB000AFP | ENCLB644SKD |