Experiment summary for ENCSR000DQM
doi:10.17989/ENCSR000DQM
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me3
- Biosample summary
- Homo sapiens Caco-2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- H3K4me3 ChIP-seq on human Caco-2
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- February 11, 2011
- Date released
- February 11, 2011
- Reference Epigenome
- ENCSR838VOB
- Annotation (physical modeling)
- Submitter comment
- Replicate 1,1 of this experiment was previously attributed to biosample ENCBS391ENC and replicate 2,1 of this experiment was previously attributed to biosample ENCBS391ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens Caco-2 cell line | ENCBS700RKG | ENCAB000ARB | ENCLB197WRI |
2 | 1 | Homo sapiens Caco-2 cell line | ENCBS530YXL | ENCAB000ARB | ENCLB418KRV |