Experiment summary for ENCSR000DPY
doi:10.17989/ENCSR000DPY
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens fibroblast of the aortic adventitia female
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human AoAF
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- Replicate 1,1 of this experiment was previously attributed to biosample ENCBS273AAA and replicate 2,1 of this experiment was previously attributed to biosample ENCBS273AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens female fibroblast of the aortic adventitia primary cell | ENCBS098SOQ | ENCAB000AFP | ENCLB433FSJ |
2 | 1 | Homo sapiens female fibroblast of the aortic adventitia primary cell | ENCBS403VCX | ENCAB000AFP | ENCLB155QDW |