Experiment summary for ENCSR000DPP
doi:10.17989/ENCSR000DPP
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens AG09309
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human AG09309
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Annotation (gkmsvm-model)
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS005ENC and replicate 1,1 of this experiment was previously attributed to biosample ENCBS005ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens AG09309 cell line | ENCBS394ULN | ENCAB000AFP | ENCLB395MEO |
1 | 1 | Homo sapiens AG09309 cell line | ENCBS112TMK | ENCAB000AFP | ENCLB126GDH |