Experiment summary for ENCSR000DPF

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A549
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human A549
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Submitter comment
Cross-correlation metrics are too poor to permit further analysis in GRCh38.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21A549 cell lineENCBS858LULENCAB000AFPENCLB796WHT
11A549 cell lineENCBS163AAAENCAB000AFPENCLB457BBX