1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. A549

Experiment summary for ENCSR000DPF

doi:10.17989/ENCSR000DPF

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A549
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human A549
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
Cross-correlation metrics are too poor to permit further analysis in GRCh38.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens A549 cell lineENCBS858LULENCAB000AFPENCLB796WHT
11Homo sapiens A549 cell lineENCBS163AAAENCAB000AFPENCLB457BBX

Files

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Replicates

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