1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. MCF 10A

Experiment summary for ENCSR000DOM

doi:10.17989/ENCSR000DOM

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
MYC
Biosample summary
Homo sapiens MCF 10A stably expressing SRC treated with 1 μM afimoxifene for 4 hours
Biosample Type
cell line
Replication type
isogenic
Description
MYC ChIP-seq on human MCF10A-Er-Src treated with 4-hydroxy-tamoxifen at 1uM for 4 hours
Treatments
1 μM afimoxifene (CHEBI:44616) for 4 hours
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Kevin Struhl, HMS
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 20, 2010
Date released
May 14, 2012
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens MCF 10A cell line stably expressing SRC treated with 1 μM afimoxifene for 4 hoursENCBS622ENCENCGM980FIGENCAB000AETENCLB119JWQ
21Homo sapiens MCF 10A cell line stably expressing SRC treated with 1 μM afimoxifene for 4 hoursENCBS622ENCENCGM980FIGENCAB000AETENCLB119JWP

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