1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. LNCaP clone FGC

Experiment summary for ENCSR000DMF

doi:10.17989/ENCSR000DMF

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens LNCaP clone FGC
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human LNCaP
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Vishwanath Iyer, UTA
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
July 26, 2012
Date released
August 27, 2012
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens LNCaP clone FGC cell lineENCBS386ENCENCAB000AXYENCLB889CJU
21Homo sapiens LNCaP clone FGC cell lineENCBS386ENCENCAB000AXYENCLB842YXB

Files

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Output type
Replicates

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