Experiment summary for ENCSR000DLW
doi:10.17989/ENCSR000DLW
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens endothelial cell of umbilical vein newborn
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human HUVEC
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Vishwanath Iyer, UTA
- Award
- U54HG004563 (Gregory Crawford, Duke)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Reference Epigenome
- ENCSR194DQD
- Annotation (gkmsvm-model)
- Annotation (physical modeling)
- Annotation (BPNet-model)
- Submitter comment
- As of August 2022, the donors associated with the biosamples in this dataset were changed from ENCDO000AAS to ENCDO466MPW and ENCDO560UMK. See PMID:32728101.
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens newborn endothelial of umbilical vein primary cell | ENCBS669AAA | ENCAB000AXY | ENCLB429LRR |
| 2 | 1 | Homo sapiens newborn endothelial of umbilical vein primary cell | ENCBS669AAA | ENCAB000AXY | ENCLB634FVR |