Experiment summary for ENCSR000CVM
doi:10.17989/ENCSR000CVM
Summary
- Status
- released
- Assay
- small RNA-seq
- Biosample summary
- Homo sapiens melanocyte of skin female adult (52 years) and male adult (55 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- RNA-seq on skin melanocytes primary whole cells (NHEM-M2) from rRNA-depleted Total RNA less than 200 nucleotides in size that was pre-treated with TAP prior to cloning.
- Treatments
- Tobacco Acid Pyrophosphatase for 1 hour
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- <200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- Date submitted
- January 19, 2011
- Date released
- July 9, 2012
- Organism Development Series
- ENCSR492APZ
- Tags
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens female adult (52 years) melanocyte of skin primary cell | ENCBS478ENC | ENCLB555AMP |
| 2 | 1 | Homo sapiens male adult (55 years) melanocyte of skin primary cell | ENCBS477ENC | ENCLB555ATU |