Experiment summary for ENCSR000CUC
doi:10.17989/ENCSR000CUC
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens CD14-positive monocyte female
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- The libraries contained in this experiment come from the whole cell fraction of independent isolates of mobilized CD14+ monocytes. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.
- Nucleic acid type
- polyadenylated mRNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR402QNO
- Platform
- Illumina Genome Analyzer IIx
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM984609
- UCSC-ENCODE-hg19:wgEncodeEH002672
- GEO:GSE90272
- References
- Date submitted
- July 13, 2011
- Date released
- June 21, 2012
- Reference Epigenome
- ENCSR518BPP
- Tags
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens female CD14-positive monocyte primary cell | ENCBS627ENC | ENCLB555AWV |
| 2 | 1 | Homo sapiens female CD14-positive monocyte primary cell | ENCBS626ENC | ENCLB555AWY |