Experiment summary for ENCSR000CTW
doi:10.17989/ENCSR000CTW
Summary
- Status
- released
- Assay
- polyA minus RNA-seq
- Biosample summary
- Homo sapiens B cell female adult (27 years) and female adult (43 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- The libraries contained in this experiment come from the whole cell fraction of independent isolates of CD20+ B cells. They are stranded PE76 Illumina GAIIx RNA-Seq libraries from rRNA-depleted Poly-A- RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- polyadenylated mRNA, rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR402QNO
- Platform
- Illumina Genome Analyzer IIx
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM981254
- UCSC-ENCODE-hg19:wgEncodeEH002666
- GEO:GSE90269
- Date submitted
- July 13, 2011
- Date released
- June 21, 2012
- Tags
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens female adult (43 years) B primary cell | ENCBS483ENC | ENCLB555AKS |
| 1 | 1 | Homo sapiens female adult (27 years) B primary cell | ENCBS484ENC | ENCLB555AKT |