Experiment summary for ENCSR000CTK
doi:10.17989/ENCSR000CTK
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens IMR-90
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on human IMR90 whole cell long total RNA
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR402QNO
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM981243
- UCSC-ENCODE-hg19:wgEncodeEH002623
- GEO:GSE90257
- Date submitted
- July 13, 2011
- Date released
- June 21, 2012
- Annotation (physical modeling)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens IMR-90 cell line | ENCBS370ENC | ENCLB555AMY |
| 2 | 1 | Homo sapiens IMR-90 cell line | ENCBS373ENC | ENCLB555AMX |