Experiment summary for ENCSR000CRU
doi:10.17989/ENCSR000CRU
Summary
- Status
- released
- Assay
- small RNA-seq
- Biosample summary
- Homo sapiens keratinocyte nuclear fraction female
- Biosample Type
- primary cell
- Replication type
- isogenic
- Description
- RNA-seq on human NHEK nucleus TAP treated small total RNA
- Treatments
- Tobacco Acid Pyrophosphatase for 1 hour
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- <200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina Genome Analyzer IIx
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- Date submitted
- January 19, 2011
- Date released
- February 22, 2012
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
3 | 1 | Homo sapiens female keratinocyte primary cell nuclear fraction | ENCBS566ENC | ENCLB555AMW |
4 | 1 | Homo sapiens female keratinocyte primary cell nuclear fraction | ENCBS568ENC | ENCLB555AMV |