Experiment summary for ENCSR000CQG

doi:10.17989/ENCSR000CQG

Summary

Status
released
Assay
polyA minus RNA-seq
Biosample summary
Homo sapiens endothelial cell of umbilical vein male newborn and newborn
Biosample Type
primary cell
Replication type
anisogenic
Description
RNA-seq on human HUVEC whole cell long polyA- RNA
Treatments
duplex-specific nuclease (DSN) normalization
Nucleic acid type
RNA
Depleted in
polyadenylated mRNA, rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR402QNO

Attribution

ENCODE2 project
Lab
Thomas Gingeras, CSHL
Award
U54HG004557 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
July 13, 2011
Date released
October 17, 2011
Submitter comment
As of August 2022, the donors associated with the biosamples in this dataset were changed from ENCDO341AAA to ENCDO466MPW and ENCDO560UMK. See PMID:32728101.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Anisogenic replicates

Anisogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens newborn endothelial of umbilical vein primary cellENCBS529ENCENCLB555AKJ
11Homo sapiens male newborn endothelial of umbilical vein primary cellENCBS528ENCENCLB555ALG