Experiment summary for ENCSR000CLR

doi:10.17989/ENCSR000CLR

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Mus musculus strain C57BL/6J brain tissue male embryo (14.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
RNA-seq on 14.5 day embryonic mouse whole brain
Nucleic acid type
polyadenylated mRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (forward)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE Mouse Project
Lab
John Stamatoyannopoulos, UW
Award
RC2HG005654 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
March 21, 2012
Date released
July 10, 2012
Submitter comment
The preferred default files of this dataset were selected based on the read counts of the fastq files because no uniform processing pipeline is available for datasets sequenced using the Applied Biosystems SOLiD platform.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain C57BL/6J male embryo (14.5 days) brain tissueENCBS227ENCENCLB175LDM
21Mus musculus strain C57BL/6J male embryo (14.5 days) brain tissueENCBS227ENCENCLB530GBS