Experiment summary for ENCSR000CHQ
doi:10.17989/ENCSR000CHQ
Summary
- Status
- released
- Assay
- DNase-seq
- Biosample summary
- Mus musculus G1E-ER4 treated with 10 nM 17β-estradiol for 24 hours
- Biosample Type
- cell line
- Replication type
- unreplicated
- Description
- DNase-seq on mouse G1E-ER4 differentiated for 24 hours
- Treatments
- 10 nM 17β-estradiol (CHEBI:16469) for 24 hours
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
Attribution
ENCODE Mouse Project
- Lab
- Ross Hardison, PennState
- Award
- RC2HG005573 (Ross Hardison, PennState)
- Project
- ENCODE
- External resources
- Date submitted
- July 25, 2012
- Date released
- August 16, 2012
- Annotation (gkmsvm-model)
- Submitter comment
- A dispersion model could not be successfully generated for this dataset, so the DNase-seq pipeline's footprinting step was skipped for this analysis.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Mus musculus G1E-ER4 cell line treated with 10 nM 17β-estradiol for 24 hours | ENCBS327ENC | ENCLB519LJI |
1 | 2 | Mus musculus G1E-ER4 cell line treated with 10 nM 17β-estradiol for 24 hours | ENCBS327ENC | ENCLB500PZZ |