Experiment summary for ENCSR000BZR
doi:10.17989/ENCSR000BZR
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Mus musculus strain C57BL/6J cortical plate tissue adult (2 months)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from adult 8 week cortical brain tissue from mixed sex littermates in mouse strain C57BL/6J. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.
- Nucleic acid type
- polyadenylated mRNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR402QNO
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- GEO:GSE90205
- GEO-obsolete:GSM1000563
- UCSC-ENCODE-mm9:wgEncodeEM003063
- Date submitted
- July 30, 2012
- Date released
- September 5, 2012
- Reference Epigenome
- ENCSR899EVA
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Mus musculus strain C57BL/6J mixed sex adult (2 months) cortical plate tissue | ENCBS258ENC | ENCLB555AYF |
2 | 1 | Mus musculus strain C57BL/6J mixed sex adult (2 months) cortical plate tissue | ENCBS259ENC | ENCLB555AYE |