Experiment summary for ENCSR000BZG
doi:10.17989/ENCSR000BZG
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Mus musculus strain C57BL/6J central nervous system tissue embryo (11.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from embryonic day 11.5 (E11.5) central nervous system tissue from mixed sex littermates in mouse strain C57BL/6J. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size.
- Nucleic acid type
- polyadenylated mRNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR402QNO
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- GEO:GSE90194
- GEO-obsolete:GSM1000573
- UCSC-ENCODE-mm9:wgEncodeEM003052
- Date submitted
- July 30, 2012
- Date released
- September 5, 2012
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Mus musculus strain C57BL/6J mixed sex embryo (11.5 days) central nervous system tissue | ENCBS250ENC | ENCLB555AYM |
2 | 1 | Mus musculus strain C57BL/6J mixed sex embryo (11.5 days) central nervous system tissue | ENCBS251ENC | ENCLB555AYN |