Experiment summary for ENCSR000BYJ
doi:10.17989/ENCSR000BYJ
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens A549 treated with 5 nM dexamethasone for 1 hour
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on A549 greater than 200bp polyA+ treated with dexamethasone at 5nM
- Treatments
- 5 nM dexamethasone (CHEBI:41879) for 1 hour
- Nucleic acid type
- polyadenylated mRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR466YMU
- Platform
- Illumina Genome Analyzer IIx
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM923435
- UCSC-ENCODE-hg19:wgEncodeEH001248
- GEO:GSE93447
- Date submitted
- January 21, 2012
- Date released
- February 23, 2012
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
2 | 1 | Homo sapiens A549 cell line treated with 5 nM dexamethasone for 1 hour | ENCBS170AAA | ENCLB457MEV |
1 | 1 | Homo sapiens A549 cell line treated with 5 nM dexamethasone for 1 hour | ENCBS170AAA | ENCLB557HDM |