Experiment summary for ENCSR000BYI

doi:10.17989/ENCSR000BYI

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Homo sapiens A549 treated with 0.5 nM dexamethasone for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on A549 greater than 200bp polyA+ treated with dexamethasone at 500pM
Treatments
0.5 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
polyadenylated mRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
unstranded
Spike-ins datasets
ENCSR466YMU

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
January 21, 2012
Date released
February 23, 2012
Submitter comment
Fastq file ENCFF000MPU contains reads of mixed lengths. Read lengths followed by respective number of reads: (36, 24141096), (76, 23107239)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens A549 cell line treated with 0.5 nM dexamethasone for 1 hourENCBS168AAAENCLB896BPX
11Homo sapiens A549 cell line treated with 0.5 nM dexamethasone for 1 hourENCBS168AAAENCLB241KOT