Experiment summary for ENCSR000BYE
doi:10.17989/ENCSR000BYE
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens T47D treated with 0.02% dimethyl sulfoxide for 4 hours
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on T-47D greater than 200bp polyA+ treated with dimethylsulfoxide for 4 hours
- Treatments
- 0.02 percent dimethyl sulfoxide (CHEBI:28262) for 4 hours
- Nucleic acid type
- polyadenylated mRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR466YMU
- Platform
- Illumina Genome Analyzer IIx
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- GEO-obsolete:GSM923428
- UCSC-ENCODE-hg19:wgEncodeEH001243
- GEO:GSE93442
- Date submitted
- January 21, 2012
- Date released
- February 23, 2012
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens T47D cell line treated with 0.02% dimethyl sulfoxide for 4 hours | ENCBS624AAA | ENCLB671LPW |
| 1 | 1 | Homo sapiens T47D cell line treated with 0.02% dimethyl sulfoxide for 4 hours | ENCBS624AAA | ENCLB209HAD |