Experiment summary for ENCSR000BYB

doi:10.17989/ENCSR000BYB

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Homo sapiens Ishikawa treated with 10 nM estradiol for 4 hours
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on ECC-1 greater than 200bp polyA+ treated with estradiol at 10nM for 4 hours. Note- This experiment previously referred to its biosample as ECC-1, however it has been found that all currently available ECC-1 are actually Ishikawa cells.
Treatments
10 nM estradiol (CHEBI:23965) for 4 hours
Nucleic acid type
polyadenylated mRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
unstranded
Spike-ins datasets
ENCSR466YMU

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
January 21, 2012
Date released
February 23, 2012
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens Ishikawa cell line treated with 10 nM estradiol for 4 hoursENCBS222DWGENCLB723FZR
21Homo sapiens Ishikawa cell line treated with 10 nM estradiol for 4 hoursENCBS222DWGENCLB990TKY