Experiment summary for ENCSR000BJR

Summary

Status
released
Assay
ChIP-seq
Target
NR3C1
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
NR3C1 ChIP-seq (protocol PCR2x) on A549 treated with dexamethasone at 100nM
Treatments
100 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
July 18, 2011
Date released
July 18, 2011
Submitter comment
Fastq file ENCFF000NCS contains reads of mixed lengths. Read lengths followed by respective number of reads: (32, 15252554), (36, 46296954).
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21A549 cell line treated with 100 nM dexamethasone for 1 hourENCBS165AAAENCAB000AHBENCLB559JHI
11A549 cell line treated with 100 nM dexamethasone for 1 hourENCBS165AAAENCAB000AHBENCLB559JHJ