1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. A549

Experiment summary for ENCSR000BHV

doi:10.17989/ENCSR000BHV

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq (protocol PCR2x) on A549 treated with dexamethasone at 100nM
Treatments
100 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
July 18, 2011
Date released
July 18, 2011
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 1 hourENCBS165AAAENCAB000AFRENCLB559JNK
21Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 1 hourENCBS165AAAENCAB000AFRENCLB559JNL

Files

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Replicates

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