Experiment summary for ENCSR000BHH
doi:10.17989/ENCSR000BHH
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- POLR2A
- Biosample summary
- Homo sapiens A549 treated with 0.02% ethanol for 1 hour
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- POLR2A ChIP-seq (protocol PCR2x) on A549 treated with ethanol at 0.02%
- Treatments
- 0.02 percent ethanol (CHEBI:16236) for 1 hour
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- References
- Date submitted
- July 18, 2011
- Date released
- July 18, 2011
- Reference Epigenome
- ENCSR797CXN
- Annotation (gkmsvm-model)
- Submitter comment
- Fastq file ENCFF000NEZ contains reads of mixed lengths. Read lengths followed by respective number of reads: (32, 6399419), (36, 9115662).
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens A549 cell line treated with 0.02% ethanol for 1 hour | ENCBS423ENC | ENCAB000AOC | ENCLB559JMU |
2 | 1 | Homo sapiens A549 cell line treated with 0.02% ethanol for 1 hour | ENCBS423ENC | ENCAB000AOC | ENCLB559JMT |