Experiment summary for ENCSR000AUE

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human A549 CTCF treated with dexamethasone at 100nM
Treatments
100 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Date submitted
November 16, 2010
Date released
August 6, 2012
Related datasets
ENCSR568MFY 
Reference epigenome for human A549 cell line (treated with dexamethasone)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11A549 cell line treated with 100 nM dexamethasone for 1 hourENCBS160AAAENCAB000AXYENCLB695AKO
21A549 cell line treated with 100 nM dexamethasone for 1 hourENCBS160AAAENCAB000AXYENCLB695AKP