Experiment summary for ENCSR000AUA

doi:10.17989/ENCSR000AUA

Alternate accession: ENCSR040LIO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
RNF2
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human K562 RNF2
Nucleic acid type
DNA
Library starting quantity
59.2ng
Size range
200-600
Fragmentation methods
see document [1-1]sonication (generic) [2-1]
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 41
Date submitted
August 6, 2012
Date released
August 6, 2012
Annotation (gkmsvm-model)
Submitter comment
As of February 28, 2017, new mapping and peak calling is required due to duplicated files.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS674MPNENCAB790JUWENCLB695ATL
21Homo sapiens K562 cell lineENCBS979ZKWENCAB790JUWENCLB119TYK