Experiment summary for ENCSR000AER
doi:10.17989/ENCSR000AER
Summary
- Status
- released
- Assay
- RAMPAGE
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- The libraries contained in this experiment come from independent growths of cell line K562. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (forward)
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG007004 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- Date submitted
- June 13, 2013
- Date released
- June 30, 2014
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 1 | Homo sapiens K562 cell line | ENCBS088RNA | ENCLB066ZZZ |
| 1 | 1 | Homo sapiens K562 cell line | ENCBS087RNA | ENCLB065ZZZ |