Experiment summary for ENCSR000AEQ
doi:10.17989/ENCSR000AEQ
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA Evaluation K562 Long Poly-A+ RNA-seq from Wold
- Nucleic acid type
- polyadenylated mRNA
- Library starting quantity
- 100ng
- Size range
- >200
- Extraction method
- Ambion mirVana
- Fragmentation methods
- chemical (Nextera tagmentation)
- Size selection method
- SPRI beads
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR013YHQ, ENCSR156CIL
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Barbara Wold, Caltech
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Aliases
- encode:evaluation_set_K562_polyA_Wold_02
- Date submitted
- July 22, 2013
- Date released
- July 7, 2014
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line | ENCBS087RNA | ENCLB063ZZZ |
| 2 | 1 | Homo sapiens K562 cell line | ENCBS088RNA | ENCLB064ZZZ |