Experiment summary for ENCSR000AEA
doi:10.17989/ENCSR000AEA
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me3
- Biosample summary
- Mus musculus strain MEL MEL treated with 2% dimethyl sulfoxide for 5 days
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- H3K4me3 Histone Modification by ChIP-seq on mouse MEL treated with 2% DMSO produced by the Snyder lab
- Treatments
- 2 percent dimethyl sulfoxide (CHEBI:28262) for 5 days
- Nucleic acid type
- DNA
- Size range
- 150-350
- Fragmentation methods
- sonication (generic)
- Size selection method
- gel
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE Mouse Project
- Lab
- Michael Snyder, Stanford
- Award
- RC2HG005602 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- UCSC-ENCODE-mm9:wgEncodeEM003326
- GEO:GSE94233
- GEO-obsolete:GSE32218
- GEO-obsolete:GSM1003754
- Date submitted
- August 15, 2012
- Date released
- August 20, 2012
- Tags
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 days | ENCBS047ENC | ENCAB000AUU | ENCLB092ZZZ |
| 1 | 1 | Mus musculus strain MEL MEL cell line treated with 2% dimethyl sulfoxide for 5 days | ENCBS047ENC | ENCAB000AUU | ENCLB091ZZZ |