1. Experiments
  2. DNase-seq
  3. Homo sapiens
  4. Caki2

Experiment summary for ENCSR515EWI

doi:10.17989/ENCSR515EWI

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens Caki2
Biosample Type
cell line
Replication type
isogenic
Description
DNase-seq on cell line Caki-2 (epithelial cell from 69 year old male human kidney, clear cell carcinoma)
Nucleic acid type
DNA

Attribution

ENCODE3 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG007010 (John Stamatoyannopoulos, UW)
Project
ENCODE
External resources
Date submitted
July 22, 2014
Date released
August 18, 2015
Annotation (gkmsvm-model)
Annotation (ChromBPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11,2Homo sapiens Caki2 cell lineENCBS768KGZENCLB384WEU
21,2Homo sapiens Caki2 cell lineENCBS461KDAENCLB538RFP

Files

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Output type
Replicates

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