Accession Description ?Coverage ?# Proteins ?# Unique Peptides ?# Peptides ?# PSMs Score A2 Coverage A2 # Peptides A2 # PSM A2 Score B2 Coverage B2 # Peptides B2 # PSM B2 Score C2 Coverage C2 # Peptides C2 # PSM C2 # AAs MW [kDa] calc. pI IPI00000690.1 "Isoform 1 of Apoptosis-inducing factor 1, mitochondrial" 30.51 5 14 14 20 65.40 30.51 14 20 613 66.9 8.95 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDNSVLVLIVGLSTVGAGAYAYK Unambiguous 2 1 IPI00000690.1 CID 1.0000 0.0000 1 1 124 5.28 0.00 0 17 25 3 775.10413 2323.29782 2.99 55.01 6518 6518 MS2 40/88 Linfeng_091311_rIgG_4.raw High SITIIGGGFLGSELAcALGR Unambiguous 3 1 IPI00000690.1 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 304 5.22 0.00 0 16 25 2 996.53326 1992.05925 0.43 49.94 5973 5973 MS2 27/38 Linfeng_091311_rIgG_4.raw High IDNSVLVLIVGLSTVGAGAYAYK Unambiguous 2 1 IPI00000690.1 CID 1.0000 0.0000 1 1 125 5.10 0.00 0 4 25 3 775.10468 2323.29947 3.70 55.01 6523 6523 MS2 40/88 Linfeng_091311_rIgG_5.raw High APSHVPFLLIGGGTAAFAAAR Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 284 4.02 0.00 0 5 25 3 675.37231 2024.10239 -2.63 40.62 4798 4798 MS2 36/80 Linfeng_091311_rIgG_4.raw High KAALSASEGEEVPQDK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 359 3.67 0.00 1 9 25 3 553.61169 1658.82053 -1.65 20.16 2071 2071 MS2 29/60 Linfeng_091311_rIgG_4.raw High RVEHHDHAVVSGR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 383 3.67 0.00 1 58 25 4 375.44656 1498.76442 1.46 2.39 202 202 MS2 32/72 Linfeng_091311_rIgG_4.raw High SITIIGGGFLGSELAcALGR Unambiguous 3 1 IPI00000690.1 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 360 3.30 0.00 0 18 25 3 664.69116 1992.05893 0.27 49.91 5969 5969 MS2 38/76 Linfeng_091311_rIgG_4.raw High KVETDHIVAAVGLEPNVELAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 265 3.28 0.00 1 35 25 3 744.74445 2232.21878 -2.13 33.05 3829 3829 MS2 37/80 Linfeng_091311_rIgG_4.raw High TGGLEIDSDFGGFR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 150 3.19 0.00 0 6 25 2 735.84546 1470.68364 -1.63 38.05 4472 4472 MS2 21/26 Linfeng_091311_rIgG_4.raw High DGEQHEDLNEVAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 101 3.15 0.00 0 21 25 3 495.22644 1483.66477 -0.84 20.32 2094 2094 MS2 25/48 Linfeng_091311_rIgG_4.raw High AALSASEGEEVPQDK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 193 3.00 0.00 0 1 25 2 765.86530 1530.72331 -3.25 22.79 2437 2437 MS2 23/28 Linfeng_091311_rIgG_4.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 219 2.94 0.00 0 4 25 2 634.30981 1267.61235 -3.28 22.34 2374 2374 MS2 17/20 Linfeng_091311_rIgG_4.raw High ISGLGLTPEQK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 510 2.74 0.00 0 6 22 2 571.82281 1142.63835 -2.86 27.99 3156 3156 MS2 16/20 Linfeng_091311_rIgG_4.raw High ALGTEVIQLFPEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 382 2.73 0.00 0 10 20 2 722.90521 1444.80315 -1.06 40.57 4792 4792 MS2 19/24 Linfeng_091311_rIgG_4.raw High SATEQSGTGIR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 375 2.72 0.00 0 45 25 2 553.77509 1106.54289 -0.72 14.86 1319 1319 MS2 17/20 Linfeng_091311_rIgG_4.raw High VETDHIVAAVGLEPNVELAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 356 2.62 0.00 0 10 25 3 702.04474 2104.11966 -4.23 35.51 4147 4147 MS2 27/76 Linfeng_091311_rIgG_4.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 221 2.41 0.00 0 35 25 2 634.30981 1267.61235 -3.28 22.44 2344 2344 MS2 16/20 Linfeng_091311_rIgG_5.raw High SATEQSGTGIR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 383 2.16 0.00 0 44 25 2 553.77521 1106.54314 -0.50 15.25 1347 1347 MS2 15/20 Linfeng_091311_rIgG_5.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 219 2.15 0.00 0 9 25 2 634.31024 1267.61321 -2.61 22.60 2414 2414 MS2 14/20 Linfeng_091311_rIgG_6.raw High DGEQHEDLNEVAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 97 2.04 0.00 0 24 25 2 742.33551 1483.66374 -1.53 20.43 2110 2110 MS2 16/24 Linfeng_091311_rIgG_4.raw IPI00000733.4 U3 small nucleolar RNA-associated protein 18 homolog 25.31 1 10 10 14 14.59 13.26 6 6 13.35 10.65 4 4 10.52 8.20 3 4 573 64.0 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FVDEGSLYGLSIATSR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 357 4.09 0.00 0 22 25 2 857.93707 1714.86687 1.26 37.67 3896 3896 MS2 24/30 Linfeng_122411_rIgG_4.raw High TGNFISTSTSLPR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 374 3.53 0.00 0 2 25 2 690.86060 1380.71391 1.52 29.13 2802 2802 MS2 18/24 Linfeng_122411_rIgG_4.raw High AGAGPGGPPQKPAPSSQR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 397 3.23 0.00 0 24 25 3 553.95581 1659.85288 -2.03 15.58 1422 1422 MS2 25/68 Linfeng_091311_rIgG_4.raw High KPPARPSAAAAAIAVAAAEEER Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 293 3.03 0.00 0 37 25 4 537.54547 2147.16005 1.48 30.87 3029 3029 MS2 37/126 Linfeng_122411_rIgG_4.raw High VYASSGDGEVYVWDVNSR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 128 2.93 0.00 0 27 100 2 1001.96869 2002.93010 7.95 41.04 5126 5126 MS2 21/34 Linfeng_20120125_PCAF_4.raw High TGNFISTSTSLPR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 373 2.91 0.00 0 15 100 2 690.86389 1380.72051 6.29 34.58 3639 3639 MS2 17/24 Linfeng_20120125_PCAF_4.raw High SGYFALGNEK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 221 2.69 0.00 0 24 25 2 543.26825 1085.52922 2.75 27.67 2606 2606 MS2 15/18 Linfeng_122411_rIgG_4.raw Medium LRLEEDKPAVER Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 357 2.66 0.00 1 23 25 4 364.45380 1454.79336 -1.99 21.37 2238 2238 MS2 32/66 Linfeng_091311_rIgG_4.raw High LVHLPScTVFSNFPVIK Unambiguous 1 1 IPI00000733.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 357 2.51 0.00 0 19 25 3 653.35583 1958.05295 -2.01 40.45 4775 4775 MS2 24/64 Linfeng_091311_rIgG_4.raw High FVDEGSLYGLSIATSR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 332 2.43 0.00 0 29 100 2 857.94324 1714.87920 8.45 46.83 6511 6511 MS2 20/30 Linfeng_20120125_PCAF_4.raw High TGNFISTSTSLPR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 363 2.25 0.00 0 12 100 2 690.86438 1380.72148 7.00 34.13 3536 3536 MS2 16/24 Linfeng_20120125_PCAF_4.raw High VAASTFSSDSK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 155 2.14 0.00 0 45 25 2 550.26556 1099.52385 -2.54 19.01 1906 1906 MS2 16/20 Linfeng_091311_rIgG_4.raw High SGYFALGNEK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 208 2.06 0.00 0 23 25 2 543.26556 1085.52385 -2.20 29.64 3379 3379 MS2 15/18 Linfeng_091311_rIgG_4.raw High IQSIYLER Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 314 2.00 0.00 0 23 25 2 511.28653 1021.56578 -1.88 28.40 3212 3212 MS2 11/14 Linfeng_091311_rIgG_4.raw IPI00002902.5 Nucleolar protein 9 9.54 1 3 3 3 10.66 9.54 3 3 702 79.3 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALLLLPVEQGFTFSGIcR Unambiguous 1 1 IPI00002902.5 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 311 4.18 0.00 0 16 25 3 674.36774 2021.08866 -0.14 48.75 5822 5822 MS2 30/68 Linfeng_091311_rIgG_4.raw High LAAFADALEFADEEKESPVEFTGHK Unambiguous 1 1 IPI00002902.5 CID 1.0000 0.0000 1 1 219 3.31 0.00 1 7 25 4 688.58167 2751.30483 -3.68 40.29 4756 4756 MS2 39/144 Linfeng_091311_rIgG_4.raw High ITHSDVAPTHILYAVNASWVGLcK Unambiguous 1 1 IPI00002902.5 C23(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 3.17 0.00 0 17 25 4 663.84418 2652.35488 -2.07 39.73 4685 4685 MS2 39/138 Linfeng_091311_rIgG_4.raw IPI00003362.2 HSPA5 protein 22.44 1 8 10 17 11.83 9.31 4 4 17.58 12.98 6 6 17.69 11.30 5 7 655 72.4 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 229 3.79 0.00 0 7 25 2 839.40637 1677.80547 -1.46 30.04 3432 3432 MS2 22/28 Linfeng_091311_rIgG_4.raw High VTHAVVTVPAYFNDAQR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 452 3.63 0.00 0 21 25 3 629.99640 1887.97464 1.80 30.45 2974 2974 MS2 26/64 Linfeng_122411_rIgG_4.raw High SQIFSTASDNQPTVTIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 356 3.55 0.00 0 9 100 2 918.97754 1836.94780 7.59 34.81 3443 3443 MS2 21/32 Linfeng_20120125_PCAF_3.raw High VTHAVVTVPAYFNDAQR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 447 3.45 0.00 0 11 25 3 629.99396 1887.96732 -2.08 31.73 3655 3655 MS2 27/64 Linfeng_091311_rIgG_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 295 3.13 0.00 0 10 25 2 839.41052 1677.81377 3.48 28.51 2719 2719 MS2 21/28 Linfeng_122411_rIgG_4.raw High TWNDPSVQQDIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 276 2.88 0.00 0 44 25 2 715.85114 1430.69499 2.73 25.49 2317 2317 MS2 18/22 Linfeng_122411_rIgG_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 290 2.79 0.00 0 19 100 2 839.41290 1677.81853 6.32 32.46 2925 2925 MS2 16/28 Linfeng_20120125_PCAF_3.raw High KSDIDEIVLVGGSTR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 457 2.77 0.00 1 12 25 3 530.29077 1588.85776 2.27 31.14 3065 3065 MS2 21/56 Linfeng_122411_rIgG_4.raw High ELEEIVQPIISK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 280 2.63 0.00 0 23 25 2 699.39972 1397.79216 2.48 35.04 3564 3564 MS2 16/22 Linfeng_122411_rIgG_4.raw High ITPSYVAFTPEGER Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 314 2.53 0.00 0 7 25 2 783.89496 1566.78264 1.74 31.64 3130 3130 MS2 19/26 Linfeng_122411_rIgG_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 314 2.44 0.00 0 11 100 2 839.41394 1677.82060 7.56 32.44 3141 3141 MS2 14/28 Linfeng_20120125_PCAF_4.raw High IINEPTAAAIAYGLDK Unambiguous 13 2 IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 1 334 2.34 0.00 0 14 100 2 830.45703 1659.90679 6.92 44.78 6019 6019 MS2 18/30 Linfeng_20120125_PCAF_4.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw High ITPSYVAFTPEGER Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 361 2.31 0.00 0 10 100 2 783.89948 1566.79167 7.51 37.39 4017 4017 MS2 15/26 Linfeng_20120125_PCAF_3.raw Medium DNHLLGTFDLTGIPPAPR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 414 2.27 0.00 0 23 25 3 645.33978 1934.00479 -4.31 40.33 4761 4761 MS2 21/68 Linfeng_091311_rIgG_4.raw High TWNDPSVQQDIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 338 2.14 0.00 0 30 100 2 715.85303 1430.69878 5.37 27.64 2074 2074 MS2 15/22 Linfeng_20120125_PCAF_3.raw High TWNDPSVQQDIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 300 2.11 0.00 0 60 100 2 715.85254 1430.69780 4.69 27.48 2045 2045 MS2 13/22 Linfeng_20120125_PCAF_3.raw IPI00003865.1 Isoform 1 of Heat shock cognate 71 kDa protein 33.13 7 14 17 35 35.92 24.30 11 12 34.31 16.41 8 11 30.93 17.03 9 12 646 70.9 5.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SINPDEAVAYGAAVQAAILSGDK Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 411 4.91 0.00 0 8 25 3 754.05603 2260.15354 3.48 45.55 4888 4888 MS2 35/88 Linfeng_122411_rIgG_4.raw High QTQTFTTYSDNQPGVLIQVYEGER Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 228 4.88 0.00 0 8 25 3 925.44598 2774.32340 -1.25 39.70 4682 4682 MS2 30/92 Linfeng_091311_rIgG_4.raw High SINPDEAVAYGAAVQAAILSGDK Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 400 4.87 0.00 0 6 25 3 754.05212 2260.14182 -1.71 46.76 5569 5569 MS2 38/88 Linfeng_091311_rIgG_4.raw High ARFEELNADLFR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 347 3.52 0.00 1 39 25 3 494.25620 1480.75403 -0.24 34.19 3457 3457 MS2 27/44 Linfeng_122411_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 368 3.48 0.00 0 5 25 3 661.33881 1982.00187 2.03 34.77 3531 3531 MS2 32/68 Linfeng_122411_rIgG_4.raw High SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 361 3.37 0.00 0 22 25 3 494.60815 1481.80991 1.87 26.45 2445 2445 MS2 24/52 Linfeng_122411_rIgG_4.raw High ARFEELNADLFR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 428 3.33 0.00 1 8 100 3 494.25983 1480.76493 7.12 48.11 6814 6814 MS2 24/44 Linfeng_20120125_PCAF_4.raw High DAGTIAGLNVLR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 380 3.33 0.00 0 6 25 3 400.56384 1199.67698 2.20 35.54 3626 3626 MS2 24/44 Linfeng_122411_rIgG_4.raw High ARFEELNADLFR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 356 3.24 0.00 1 0 25 3 494.25281 1480.74387 -7.10 35.14 4098 4098 MS2 26/44 Linfeng_091311_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 294 3.22 0.00 0 11 25 2 991.50037 1981.99346 -2.22 35.91 4200 4200 MS2 16/34 Linfeng_091311_rIgG_4.raw High SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 332 3.14 0.00 0 11 100 2 741.40912 1481.81096 2.58 33.00 3279 3279 MS2 22/26 Linfeng_20120125_PCAF_4.raw High LDKSQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 273 3.03 0.00 1 21 25 3 613.34241 1838.01267 -0.25 28.90 2771 2771 MS2 23/64 Linfeng_122411_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 366 2.97 0.00 0 15 25 3 661.33551 1981.99198 -2.96 35.83 4189 4189 MS2 30/68 Linfeng_091311_rIgG_4.raw High NQTAEKEEFEHQQK Unambiguous 1 1 IPI00003865.1 CID 1.0000 0.0000 1 1 212 2.91 0.00 1 14 25 3 582.60687 1745.80606 -1.67 15.50 1410 1410 MS2 26/52 Linfeng_091311_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 359 2.90 0.00 0 12 25 2 600.34229 1199.67729 2.47 35.48 3619 3619 MS2 20/22 Linfeng_122411_rIgG_4.raw High MKEIAEAYLGK Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 386 2.86 0.00 1 26 25 3 418.22607 1252.66367 2.41 24.76 2218 2218 MS2 23/40 Linfeng_122411_rIgG_4.raw High NQVAMNPTNTVFDAK Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 311 2.85 0.00 0 35 100 2 825.40698 1649.80669 6.93 33.94 3493 3493 MS2 18/28 Linfeng_20120125_PCAF_4.raw High SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 321 2.73 0.00 0 18 100 3 494.60989 1481.81513 5.40 33.04 3289 3289 MS2 22/52 Linfeng_20120125_PCAF_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 386 2.69 0.00 0 8 100 3 661.34192 1982.01120 6.74 42.57 5484 5484 MS2 24/68 Linfeng_20120125_PCAF_4.raw High MKEIAEAYLGK Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 342 2.67 0.00 1 16 100 3 418.22809 1252.66971 7.23 31.47 2929 2929 MS2 21/40 Linfeng_20120125_PCAF_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 223 2.64 0.00 0 47 25 2 744.35620 1487.70513 2.56 27.93 2361 2361 MS2 17/24 Linfeng_122411_rIgG_10.raw High IINEPTAAAIAYGLDKK Unambiguous 6 1 IPI00003865.1 CID 1.0000 0.0000 1 1 186 2.61 0.00 1 20 100 2 894.50610 1788.00493 8.20 42.74 5525 5525 MS2 20/32 Linfeng_20120125_PCAF_4.raw Medium STAGDTHLGGEDFDNR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 45 2.49 0.00 0 59 19 3 564.57800 1691.71946 -3.67 23.45 2529 2529 MS2 23/60 Linfeng_091311_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 431 2.44 0.00 0 30 25 2 600.33795 1199.66863 -4.76 36.69 4299 4299 MS2 20/22 Linfeng_091311_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 342 2.34 0.00 0 7 100 2 991.51007 1982.01286 7.57 42.38 5438 5438 MS2 16/34 Linfeng_20120125_PCAF_4.raw High IINEPTAAAIAYGLDK Unambiguous 13 2 IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 1 334 2.34 0.00 0 14 100 2 830.45703 1659.90679 6.92 44.78 6019 6019 MS2 18/30 Linfeng_20120125_PCAF_4.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw Medium SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 392 2.26 0.00 0 48 25 3 494.60504 1481.80057 -4.43 28.51 3227 3227 MS2 20/52 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 222 2.22 0.00 0 14 25 2 744.35614 1487.70500 2.48 29.24 2817 2817 MS2 19/24 Linfeng_122411_rIgG_4.raw High FEELNADLFR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 337 2.20 0.00 0 16 25 2 627.30981 1253.61235 -3.02 37.85 4447 4447 MS2 15/18 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 183 2.13 0.00 0 21 25 2 744.35291 1487.69853 -1.87 30.71 3523 3523 MS2 18/24 Linfeng_091311_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 417 2.10 0.00 0 38 100 2 600.34497 1199.68266 6.95 42.63 5499 5499 MS2 19/22 Linfeng_20120125_PCAF_4.raw High NSLESYAFNMK Unambiguous 1 1 IPI00003865.1 CID 1.0000 0.0000 1 1 187 2.09 0.00 0 20 100 2 652.30786 1303.60845 7.43 40.60 5022 5022 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 229 2.04 0.00 0 39 25 2 744.35632 1487.70537 2.73 27.90 2277 2277 MS2 17/24 Linfeng_122411_rIgG_9.raw High NSLESYAFNMK Unambiguous 1 1 IPI00003865.1 CID 1.0000 0.0000 1 1 180 2.03 0.00 0 28 100 2 652.30780 1303.60832 7.34 40.78 5063 5063 MS2 15/20 Linfeng_20120125_PCAF_4.raw IPI00003881.5 Heterogeneous nuclear ribonucleoprotein F 12.05 1 2 3 5 16.90 12.05 3 5 0.00 415 45.6 5.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 297 4.22 0.00 0 29 25 2 998.99023 1996.97319 -1.60 46.37 5483 5483 MS2 21/32 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 345 3.65 0.00 0 18 25 3 666.32959 1996.97422 -1.09 46.30 5486 5486 MS2 27/64 Linfeng_091311_rIgG_6.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 328 3.26 0.00 0 13 25 3 666.32922 1996.97312 -1.64 46.36 5481 5481 MS2 29/64 Linfeng_091311_rIgG_5.raw High ITGEAFVQFASQELAEK Unambiguous 1 1 IPI00003881.5 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 28 25 3 623.31757 1867.93814 -2.98 44.50 5247 5247 MS2 29/64 Linfeng_091311_rIgG_5.raw High HSGPNSADSANDGFVR Unambiguous 1 1 IPI00003881.5 CID 1.0000 0.0000 1 1 80 2.81 0.00 0 35 25 3 544.24408 1630.71769 -1.73 20.22 2044 2044 MS2 24/60 Linfeng_091311_rIgG_5.raw IPI00003886.3 Isoform 2 of Guanine nucleotide-binding protein-like 3 16.76 2 6 6 8 13.45 11.36 4 4 13.82 10.24 4 4 537 60.5 8.79 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QITIIDSPSFIVSPLNSSSALALR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 155 4.99 0.00 0 17 25 3 843.80127 2529.38926 -1.24 46.92 5590 5590 MS2 36/92 Linfeng_091311_rIgG_4.raw High VIEASDVVLEVLDAR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 333 4.07 0.00 0 15 25 3 543.30304 1627.89457 2.67 46.55 5013 5013 MS2 29/56 Linfeng_122411_rIgG_4.raw High SGFNLEELEKNNAQSIR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 360 3.88 0.00 1 37 25 3 650.32977 1948.97477 1.22 32.87 3288 3288 MS2 33/64 Linfeng_122411_rIgG_4.raw High VIEASDVVLEVLDAR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 361 3.58 0.00 0 4 25 3 543.30109 1627.88871 -0.93 47.91 5715 5715 MS2 25/56 Linfeng_091311_rIgG_4.raw High NSLEFFTVLAQR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 357 3.50 0.00 0 12 25 3 475.59048 1424.75690 2.53 42.44 4494 4494 MS2 22/44 Linfeng_122411_rIgG_4.raw High ENLESWLNYLK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 354 2.69 0.00 0 35 25 2 704.85822 1408.70915 -1.13 45.97 5471 5471 MS2 17/20 Linfeng_091311_rIgG_4.raw High VGVIGFPNVGK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 511 2.36 0.00 0 12 25 2 543.82013 1086.63298 2.13 33.23 3335 3335 MS2 17/20 Linfeng_122411_rIgG_4.raw High VGVIGFPNVGK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 427 2.20 0.00 0 31 25 2 543.81799 1086.62871 -1.81 34.64 4034 4034 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00003935.6 Histone H2B type 2-E 57.94 6 2 10 30 26.88 47.62 7 9 58.96 52.38 7 21 0.00 126 13.9 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 219 4.32 0.00 0 3 25 3 581.94611 1743.82376 2.51 47.13 4850 4850 MS2 31/56 Linfeng_122411_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 220 4.11 0.00 0 1 25 3 581.94641 1743.82468 3.03 47.15 4735 4735 MS2 31/56 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 202 4.03 0.00 0 0 25 3 581.94354 1743.81607 -1.90 48.36 5903 5903 MS2 31/56 Linfeng_091311_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 196 4.02 0.00 0 10 25 2 872.41638 1743.82549 3.50 47.09 4727 4727 MS2 23/28 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 189 3.92 0.00 0 11 25 2 872.41315 1743.81902 -0.21 48.33 5900 5900 MS2 23/28 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTKYTSSK Unambiguous 14 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 406 3.86 0.00 2 54 25 4 449.23911 1793.93459 -2.60 18.28 1886 1886 MS2 30/96 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.85 0.00 1 3 15 3 409.89600 1227.67344 3.42 2.95 239 239 MS2 27/44 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 190 3.83 0.00 0 4 25 2 872.41644 1743.82561 3.57 47.04 4839 4839 MS2 22/28 Linfeng_122411_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 209 3.63 0.00 0 15 25 2 872.41547 1743.82366 2.45 47.22 4895 4895 MS2 23/28 Linfeng_122411_rIgG_8.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 358 3.60 0.00 1 38 25 3 409.89291 1227.66419 -4.11 2.70 259 259 MS2 27/44 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.02 0.00 1 4 22 3 409.89587 1227.67307 3.13 2.88 242 242 MS2 25/44 Linfeng_122411_rIgG_10.raw High SRKESYSIYVYK Unambiguous 4 1 IPI00003935.6 CID 1.0000 0.0000 1 1 400 2.76 0.00 2 27 25 3 508.26654 1522.78507 -3.27 26.98 3113 3113 MS2 22/44 Linfeng_091311_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 367 2.71 0.00 1 22 25 3 427.22406 1279.65763 0.57 25.64 2059 2059 MS2 23/36 Linfeng_122411_rIgG_10.raw Medium STITSREIQTAVRLLLPGELAK Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.65 0.00 2 25 25 4 599.85388 2396.39370 2.69 43.55 4393 4393 MS2 32/126 Linfeng_122411_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 325 2.42 0.00 1 3 2 2 640.33154 1279.65581 -0.85 3.36 319 319 MS2 15/18 Linfeng_122411_rIgG_10.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 61 2.42 0.00 1 7 25 3 584.35382 1751.04691 2.44 38.48 3742 3742 MS2 24/60 Linfeng_122411_rIgG_10.raw Medium KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 375 2.41 0.00 1 14 25 3 427.22433 1279.65845 1.22 25.38 2360 2360 MS2 21/36 Linfeng_122411_rIgG_6.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 61 2.36 0.00 1 6 25 3 584.35364 1751.04636 2.12 38.40 3625 3625 MS2 25/60 Linfeng_122411_rIgG_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 351 2.36 0.00 1 53 25 2 640.33203 1279.65679 -0.08 25.66 2062 2062 MS2 13/18 Linfeng_122411_rIgG_10.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 73 2.36 0.00 1 4 22 3 584.35107 1751.03867 -2.27 39.36 4763 4763 MS2 24/60 Linfeng_091311_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 325 2.36 0.00 1 2 4 2 640.33160 1279.65593 -0.75 3.34 302 302 MS2 15/18 Linfeng_122411_rIgG_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 296 2.20 0.00 1 9 3 2 640.32831 1279.64934 -5.90 26.65 3067 3067 MS2 15/18 Linfeng_091311_rIgG_10.raw High IAGEASR Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 515 2.13 0.00 0 3 25 2 352.19202 703.37676 4.81 2.96 244 244 MS2 11/12 Linfeng_122411_rIgG_8.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 75 2.11 0.00 0 3 18 2 477.30609 953.60491 1.94 31.83 2792 2792 MS2 14/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 30 2.10 0.00 0 3 13 2 477.30441 953.60155 -1.58 32.11 3324 3324 MS2 13/16 Linfeng_122411_rIgG_5.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 39 2.09 0.00 0 8 25 2 477.30557 953.60387 0.86 31.84 2887 2887 MS2 13/16 Linfeng_122411_rIgG_10.raw High HAVSEGTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 199 2.08 0.00 0 32 25 2 414.71359 828.41991 -1.37 0.15 22 22 MS2 12/14 Linfeng_091311_rIgG_10.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 7 25 2 477.30594 953.60460 1.62 34.03 3076 3076 MS2 12/16 Linfeng_122411_rIgG_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 338 2.06 0.00 1 16 25 2 640.33020 1279.65312 -2.94 30.42 3592 3592 MS2 15/18 Linfeng_091311_rIgG_10.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 37 2.01 0.00 0 11 25 2 477.30457 953.60185 -1.26 44.35 4495 4495 MS2 10/16 Linfeng_122411_rIgG_10.raw IPI00004273.6 Isoform 1 of RNA-binding protein 25 11.63 2 8 8 8 21.65 11.63 8 8 843 100.1 6.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIEYIGEEEATLVDFVcSK Unambiguous 2 1 IPI00004273.6 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 3.81 0.00 0 25 25 3 739.03229 2215.08231 -0.75 48.37 5848 5848 MS2 27/72 Linfeng_091311_rIgG_2.raw High DREEDEEDAYER Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 10 2.99 0.00 1 45 25 3 519.20807 1555.60965 -3.03 19.58 2025 2025 MS2 19/44 Linfeng_091311_rIgG_2.raw High LLHDLQIGEK Unambiguous 1 1 IPI00004273.6 CID 1.0000 0.0000 1 1 298 2.91 0.00 0 26 25 3 389.22256 1165.65314 -3.83 27.09 3076 3076 MS2 22/36 Linfeng_091311_rIgG_2.raw High DREEDEEDAYERR Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 51 2.78 0.00 2 23 25 3 571.24158 1711.71018 -3.10 19.08 1955 1955 MS2 18/48 Linfeng_091311_rIgG_2.raw High LLAEGHPDPDAELQR Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 356 2.52 0.00 0 25 25 3 554.27795 1660.81931 -5.84 25.86 2906 2906 MS2 22/56 Linfeng_091311_rIgG_2.raw Medium EYSSELNAPSQESDSHPR Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 64 2.25 0.00 0 0 25 3 678.29657 2032.87516 -4.51 21.91 2351 2351 MS2 26/68 Linfeng_091311_rIgG_2.raw High LGASNSPGQPNSVK Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 326 2.21 0.00 0 11 25 2 678.34753 1355.68779 -2.68 18.19 1829 1829 MS2 15/26 Linfeng_091311_rIgG_2.raw High LLIYETEAK Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 196 2.18 0.00 0 53 25 2 540.30127 1079.59526 -2.85 29.35 3384 3384 MS2 12/16 Linfeng_091311_rIgG_2.raw IPI00005024.3 Isoform 1 of Myb-binding protein 1A 7.23 3 7 7 8 21.41 7.23 7 8 1328 148.8 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EFLDFFWDIAKPEQETR Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 268 3.22 0.00 0 22 25 3 724.35315 2171.04489 0.18 49.48 5987 5987 MS2 20/64 Linfeng_091311_rIgG_2.raw High VLDLVEVLVTK Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 159 3.10 0.00 0 41 25 2 614.38000 1227.75273 -2.60 45.09 5430 5430 MS2 17/20 Linfeng_091311_rIgG_2.raw High FLSPPALQGYVAWLR Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 358 2.79 0.00 0 0 25 3 573.31696 1717.93631 -3.61 47.53 5743 5743 MS2 30/56 Linfeng_091311_rIgG_2.raw High ALVDILSEVSK Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 394 2.77 0.00 0 14 25 2 587.33820 1173.66911 -2.96 42.12 5056 5056 MS2 18/20 Linfeng_091311_rIgG_2.raw High HPFSFPLENQAR Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 310 2.57 0.00 0 18 25 3 481.57553 1442.71204 -3.84 31.77 3709 3709 MS2 21/44 Linfeng_091311_rIgG_2.raw Medium AQHQQALSSLELLNVLFR Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 227 2.45 0.00 0 17 25 3 689.71594 2067.13327 -0.66 47.41 5728 5728 MS2 27/68 Linfeng_091311_rIgG_2.raw High ATLQEILPEVLK Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 201 2.36 0.00 0 33 25 2 677.40222 1353.79717 -1.25 43.30 5204 5204 MS2 17/22 Linfeng_091311_rIgG_2.raw High VLDLVEVLVTK Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 170 2.16 0.00 0 34 25 2 614.38068 1227.75408 -1.51 45.32 5388 5388 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00005154.1 FACT complex subunit SSRP1 14.67 1 7 7 12 24.48 13.96 6 7 16.01 10.44 5 5 709 81.0 6.87 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 310 5.56 0.00 0 8 25 3 884.10541 2650.30167 -0.74 48.35 5772 5772 MS2 35/92 Linfeng_091311_rIgG_3.raw High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 325 4.84 0.00 0 20 25 3 884.10651 2650.30497 0.50 48.65 5810 5810 MS2 35/92 Linfeng_091311_rIgG_4.raw High FGGQLLSFDIGDQPVFEIPLSNVSQcTTGK Unambiguous 1 1 IPI00005154.1 C26(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 4.77 0.00 0 33 25 3 1085.53809 3254.59970 -1.31 50.91 6093 6093 MS2 41/116 Linfeng_091311_rIgG_4.raw High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 288 4.60 0.00 0 7 25 3 884.11035 2650.31650 4.85 47.13 5086 5086 MS2 36/92 Linfeng_122411_rIgG_4.raw High ADVIQATGDAIcIFR Unambiguous 1 1 IPI00005154.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 3.55 0.00 0 12 25 3 550.61670 1649.83554 2.36 40.26 4219 4219 MS2 33/56 Linfeng_122411_rIgG_4.raw High ASSGLLYPLER Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 413 2.73 0.00 0 23 25 2 603.33087 1205.65447 1.62 33.13 3322 3322 MS2 16/20 Linfeng_122411_rIgG_4.raw High FDEISFVNFAR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 331 2.71 0.00 0 22 25 2 672.83484 1344.66240 3.02 40.35 4231 4231 MS2 18/20 Linfeng_122411_rIgG_4.raw High ASSGLLYPLER Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 408 2.54 0.00 0 15 25 2 603.32727 1205.64726 -4.35 34.46 4018 4018 MS2 16/20 Linfeng_091311_rIgG_3.raw High FDEISFVNFAR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 280 2.51 0.00 0 37 25 2 672.83167 1344.65605 -1.70 41.48 4911 4911 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium TFDYKIPYTTVLR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 440 2.42 0.00 1 20 25 3 539.62909 1616.87271 2.72 35.22 3586 3586 MS2 23/48 Linfeng_122411_rIgG_4.raw High ADVIQATGDAIcIFR Unambiguous 1 1 IPI00005154.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.26 0.00 0 50 25 2 825.41766 1649.82805 -2.18 41.31 4890 4890 MS2 22/28 Linfeng_091311_rIgG_3.raw High IPYTTVLR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 190 2.01 0.00 0 50 25 2 481.78558 962.56389 -3.20 29.42 3356 3356 MS2 10/14 Linfeng_091311_rIgG_3.raw IPI00005198.2 Interleukin enhancer-binding factor 2 25.90 3 7 7 18 30.00 18.46 5 11 24.53 22.82 6 7 390 43.0 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 388 4.48 0.00 0 5 7 3 700.37048 2099.09690 -0.52 40.28 4448 4448 MS2 33/76 Linfeng_122411_rIgG_5.raw High ILGQEGDASYLASEISTWDGVIVTPSEK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 265 4.00 0.00 0 7 25 3 989.16193 2965.47123 1.15 47.25 5368 5368 MS2 31/108 Linfeng_122411_rIgG_5.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 377 3.91 0.00 0 10 25 3 700.36877 2099.09177 -2.96 41.52 4867 4867 MS2 32/76 Linfeng_091311_rIgG_5.raw High ILGQEGDASYLASEISTWDGVIVTPSEK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 266 3.81 0.00 0 19 25 4 742.12347 2965.47207 1.43 47.28 5372 5372 MS2 38/162 Linfeng_122411_rIgG_5.raw High VKPAPDETSFSEALLK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 415 3.65 0.00 0 12 12 3 577.97565 1731.91239 -2.33 31.11 3189 3189 MS2 31/60 Linfeng_122411_rIgG_5.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 20 25 3 700.36914 2099.09287 -2.44 41.56 4893 4893 MS2 32/76 Linfeng_091311_rIgG_6.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 412 3.41 0.00 0 11 25 3 700.36938 2099.09360 -2.09 41.63 4892 4892 MS2 28/76 Linfeng_091311_rIgG_7.raw High VKPAPDETSFSEALLK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 413 3.29 0.00 0 39 25 3 577.97455 1731.90909 -4.24 32.61 3708 3708 MS2 28/60 Linfeng_091311_rIgG_5.raw High VKPAPDETSFSEALLKR Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 393 3.27 0.00 1 40 25 4 472.75955 1888.01638 -0.62 28.84 2874 2874 MS2 37/96 Linfeng_122411_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 149 2.88 0.00 0 15 17 3 470.61609 1409.83371 -1.85 39.91 4398 4398 MS2 25/52 Linfeng_122411_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 130 2.70 0.00 0 31 25 2 705.41919 1409.83110 -3.70 41.18 4823 4823 MS2 21/26 Linfeng_091311_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 135 2.57 0.00 0 10 25 3 470.61526 1409.83124 -3.60 41.30 4838 4838 MS2 24/52 Linfeng_091311_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 205 2.44 0.00 0 23 25 2 521.32361 1041.63994 -1.56 29.18 2920 2920 MS2 17/18 Linfeng_122411_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 251 2.31 0.00 0 21 25 2 521.32214 1041.63701 -4.37 31.28 3534 3534 MS2 17/18 Linfeng_091311_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 125 2.23 0.00 0 27 25 2 705.41974 1409.83220 -2.92 41.32 4863 4863 MS2 19/26 Linfeng_091311_rIgG_6.raw High WFEENASQSTVK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 185 2.10 0.00 0 3 25 2 713.33405 1425.66081 -2.61 27.72 3058 3058 MS2 19/22 Linfeng_091311_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 257 2.05 0.00 0 26 25 2 521.32245 1041.63762 -3.78 31.46 3605 3605 MS2 17/18 Linfeng_091311_rIgG_6.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 213 2.01 0.00 0 16 25 2 521.32300 1041.63872 -2.73 31.55 3605 3605 MS2 17/18 Linfeng_091311_rIgG_7.raw IPI00005648.1 Scaffold attachment factor B2 18.05 3 5 13 49 33.75 13.64 9 10 28.23 11.23 6 7 129.95 12.07 8 32 953 107.4 6.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 7.74 0.00 1 1 25 4 889.91260 3556.62856 2.42 31.92 3021 3021 MS2 64/192 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 7.49 0.00 0 0 100 3 1143.52234 3428.55246 8.02 41.99 4901 4901 MS2 43/124 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 6.66 0.00 1 10 25 4 889.90790 3556.60976 -2.86 32.78 3843 3843 MS2 55/192 Linfeng_091311_rIgG_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 117 5.90 0.00 1 1 100 4 889.91663 3556.64467 6.95 42.14 4930 4930 MS2 52/192 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 5.87 0.00 0 0 100 3 1143.52209 3428.55173 7.80 41.79 4864 4864 MS2 38/124 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 193 5.75 0.00 1 1 100 3 950.11597 2848.33335 7.48 35.16 3596 3596 MS2 41/100 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 157 5.57 0.00 1 1 12 3 950.10638 2848.30460 -2.62 30.75 3573 3573 MS2 42/100 Linfeng_091311_rIgG_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 5.23 0.00 0 0 100 3 1143.52271 3428.55356 8.34 41.81 4867 4867 MS2 40/124 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 114 5.10 0.00 1 6 100 4 889.91626 3556.64321 6.54 42.08 4919 4919 MS2 48/192 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 175 5.04 0.00 2 2 100 3 992.81439 2976.42862 7.26 33.97 3362 3362 MS2 38/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 180 4.99 0.00 2 4 100 3 992.81421 2976.42807 7.07 33.87 3344 3344 MS2 39/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 170 4.76 0.00 2 6 100 3 992.81342 2976.42569 6.27 34.05 3378 3378 MS2 34/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 181 4.58 0.00 2 6 100 3 992.81476 2976.42972 7.63 33.92 3353 3353 MS2 31/104 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 124 4.52 0.00 1 10 100 4 889.91724 3556.64712 7.64 42.29 4960 4960 MS2 42/192 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 188 4.31 0.00 1 0 100 3 950.11560 2848.33225 7.09 34.76 3520 3520 MS2 39/100 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 107 4.27 0.00 1 5 100 4 889.91504 3556.63833 5.17 42.47 5001 5001 MS2 43/192 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 4.26 0.00 0 0 17 4 857.88892 3428.53383 2.58 33.39 3212 3212 MS2 48/186 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 62 4.18 0.00 0 2 25 4 857.88373 3428.51308 -3.47 34.27 3994 3994 MS2 47/186 Linfeng_091311_rIgG_3.raw High AVKEEGQDPDEIGIELEATSK Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 355 4.15 0.00 1 4 25 3 753.37396 2258.10733 1.68 30.84 2880 2880 MS2 35/80 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 4.15 0.00 0 5 100 4 857.89313 3428.55068 7.50 42.01 4906 4906 MS2 37/186 Linfeng_20120125_PCAF_2.raw High AVKEEGQDPDEIGIELEATSK Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 383 4.11 0.00 1 10 100 3 753.37787 2258.11905 6.86 37.37 4024 4024 MS2 32/80 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 179 4.00 0.00 2 6 100 3 992.81409 2976.42771 6.95 33.71 3315 3315 MS2 34/104 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 3.91 0.00 0 8 100 4 857.89307 3428.55044 7.42 41.76 4857 4857 MS2 41/186 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 3.81 0.00 1 0 100 4 889.91693 3556.64589 7.29 42.00 4904 4904 MS2 47/192 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 3.71 0.00 1 20 100 2 867.91797 1734.82866 7.49 34.32 3435 3435 MS2 18/28 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 195 3.57 0.00 1 7 100 3 950.11646 2848.33481 7.99 35.05 4326 4326 MS2 32/100 Linfeng_20120125_PCAF_1.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.50 0.00 0 9 100 4 857.89276 3428.54922 7.07 41.81 4866 4866 MS2 43/186 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.41 0.00 1 4 25 3 578.94489 1734.82010 2.55 28.32 2549 2549 MS2 29/56 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 3.39 0.00 0 8 100 4 857.89301 3428.55019 7.35 42.25 4953 4953 MS2 41/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 96 3.37 0.00 0 7 100 4 857.89331 3428.55141 7.71 42.13 4929 4929 MS2 38/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.34 0.00 0 10 100 4 857.89246 3428.54799 6.71 41.90 4885 4885 MS2 43/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.31 0.00 0 81 100 4 857.89270 3428.54897 7.00 41.71 4847 4847 MS2 38/186 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 3.27 0.00 1 18 25 3 578.94171 1734.81058 -2.94 29.69 3430 3430 MS2 27/56 Linfeng_091311_rIgG_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 129 3.11 0.00 1 6 100 4 889.91748 3556.64809 7.91 42.26 4955 4955 MS2 37/192 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.06 0.00 1 3 25 5 712.13104 3556.62611 1.73 32.02 3034 3034 MS2 51/256 Linfeng_122411_rIgG_3.raw Medium SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 162 2.99 0.00 2 14 25 4 744.85962 2976.41665 3.23 27.45 2436 2436 MS2 32/156 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 270 2.93 0.00 1 31 100 2 867.91931 1734.83135 9.03 34.46 3462 3462 MS2 17/28 Linfeng_20120125_PCAF_2.raw Medium LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 2.91 0.00 0 4 100 4 857.89355 3428.55239 7.99 42.17 4935 4935 MS2 40/186 Linfeng_20120125_PCAF_2.raw High NLWVSGLSSTTR Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 401 2.63 0.00 0 10 25 2 660.84998 1320.69267 1.50 33.10 3174 3174 MS2 17/22 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 2.55 0.00 1 13 100 3 578.94745 1734.82779 6.98 34.11 3391 3391 MS2 25/56 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 219 2.53 0.00 1 10 25 3 578.94226 1734.81223 -1.99 29.73 3398 3398 MS2 21/56 Linfeng_091311_rIgG_3.raw Medium KEEKDQDELKPGPTNR Unambiguous 1 1 IPI00005648.1 CID 1.0000 0.0000 1 1 359 2.50 0.00 2 3 25 4 471.74066 1883.94082 -2.67 14.87 1361 1361 MS2 27/90 Linfeng_091311_rIgG_2.raw High NTLETSSLNFK Unambiguous 2 1 IPI00005648.1 CID 1.0000 0.0000 1 1 295 2.39 0.00 0 16 25 2 627.32068 1253.63408 -2.53 29.80 3445 3445 MS2 17/20 Linfeng_091311_rIgG_2.raw Medium KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 2.30 0.00 1 32 100 3 578.94702 1734.82651 6.25 34.71 3512 3512 MS2 22/56 Linfeng_20120125_PCAF_2.raw High ILDILGETcK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 434 2.26 0.00 0 11 14 2 581.31024 1161.61321 -4.51 35.31 4175 4175 MS2 16/18 Linfeng_091311_rIgG_2.raw High REPAEQPGDGER Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 2.21 0.00 1 16 25 2 670.81232 1340.61736 -1.23 13.33 1143 1143 MS2 16/22 Linfeng_091311_rIgG_2.raw High LQLEcQR Unambiguous 1 1 IPI00005648.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 2.18 0.00 0 23 25 2 473.74100 946.47472 -2.96 21.53 2297 2297 MS2 11/12 Linfeng_091311_rIgG_2.raw High NTLETSSLNFK Unambiguous 2 1 IPI00005648.1 CID 1.0000 0.0000 1 1 324 2.14 0.00 0 37 100 2 627.32666 1253.64604 7.01 32.06 2993 2993 MS2 14/20 Linfeng_20120125_PCAF_2.raw High ADSLLAVVK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 563 2.04 0.00 0 19 100 2 458.28210 915.55693 6.47 36.78 3904 3904 MS2 15/16 Linfeng_20120125_PCAF_2.raw IPI00005675.3 NF-kappa-B-repressing factor 5.07 2 3 3 3 7.97 5.07 3 3 690 77.6 8.79 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SESHTDLTFSR Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 143 3.14 0.00 0 11 25 3 427.20056 1279.58713 -3.31 22.82 2446 2446 MS2 23/40 Linfeng_091311_rIgG_3.raw High DASGQPIFNASAK Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 280 2.47 0.00 0 10 25 2 653.32233 1305.63738 -4.63 26.62 2975 2975 MS2 17/24 Linfeng_091311_rIgG_3.raw High TNPEYIYAPLK Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 350 2.36 0.00 0 60 25 2 654.84344 1308.67961 -2.94 31.76 3669 3669 MS2 17/20 Linfeng_091311_rIgG_3.raw IPI00005859.5 "Keratin, type II cytoskeletal 75" 20.33 3 2 14 153 178.15 12.16 8 74 124.91 18.69 11 46 84.24 9.98 5 33 551 59.5 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 260 3.80 0.00 1 30 100 3 787.05029 2359.13633 6.85 42.78 5068 5068 MS2 33/76 Linfeng_20120125_PCAF_2.raw High QcSSLQTAIADAEQR Unambiguous 2 1 IPI00005859.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 3.70 0.00 0 17 25 3 559.93311 1677.78476 -0.82 32.18 2841 2841 MS2 29/56 Linfeng_122411_rIgG_9.raw High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 257 3.43 0.00 1 31 100 3 787.05023 2359.13614 6.77 42.73 5058 5058 MS2 31/76 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High TAAENEFVALK Unambiguous 2 1 IPI00005859.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 12 25 2 596.81549 1192.62370 2.36 25.13 1929 1929 MS2 17/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 368 2.51 0.00 0 19 100 2 583.29999 1165.59270 6.76 25.58 1922 1922 MS2 17/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00006379.1 Nucleolar protein 58 28.36 2 12 12 34 42.79 19.85 8 14 29.10 17.20 7 10 27.64 10.59 4 10 529 59.5 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 243 4.54 0.00 0 42 25 2 957.47040 1913.93352 1.08 52.13 6230 6230 MS2 25/34 Linfeng_091311_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 295 4.33 0.00 0 11 25 3 638.65063 1913.93735 3.08 50.66 5802 5802 MS2 33/68 Linfeng_122411_rIgG_5.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 311 4.27 0.00 0 18 25 3 638.64880 1913.93186 0.21 52.30 6223 6223 MS2 31/68 Linfeng_091311_rIgG_5.raw High YDAFGEDSSSAMGVENR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 29 4.11 0.00 0 5 100 2 917.88654 1834.76579 5.93 31.34 3422 3422 MS2 26/32 Linfeng_20120125_PCAF_1.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 392 3.89 0.00 0 8 25 3 578.64410 1733.91776 -2.53 30.61 3509 3509 MS2 33/60 Linfeng_091311_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 306 3.77 0.00 0 15 25 3 638.64886 1913.93204 0.31 52.11 6227 6227 MS2 33/68 Linfeng_091311_rIgG_4.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 367 3.72 0.00 0 9 25 3 578.64642 1733.92472 1.49 29.47 2846 2846 MS2 31/60 Linfeng_122411_rIgG_4.raw High KIEQVDKEDEITEK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 425 3.55 0.00 2 8 25 3 568.62646 1703.86484 -2.95 19.51 1978 1978 MS2 26/52 Linfeng_091311_rIgG_4.raw High TYDPSGDSTLPTcSK Unambiguous 1 1 IPI00006379.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.29 0.00 0 6 25 2 814.85760 1628.70793 -1.82 24.37 2658 2658 MS2 23/28 Linfeng_091311_rIgG_4.raw High YDAFGEDSSSAMGVENR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 35 3.23 0.00 0 0 100 2 917.88733 1834.76738 6.79 31.31 2899 2899 MS2 21/32 Linfeng_20120125_PCAF_4.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 386 3.13 0.00 0 16 100 3 578.64886 1733.93204 5.71 41.56 5870 5870 MS2 28/60 Linfeng_20120125_PCAF_1.raw High LSELLPEEVEAEVK Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 367 3.07 0.00 0 6 25 2 792.92456 1584.84184 3.19 36.62 3763 3763 MS2 21/26 Linfeng_122411_rIgG_4.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 414 3.05 0.00 0 27 25 3 578.64374 1733.91666 -3.16 30.83 3473 3473 MS2 27/60 Linfeng_091311_rIgG_5.raw High YDAFGEDSSSAMGVENR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 27 2.98 0.00 0 9 100 2 917.88666 1834.76604 6.06 31.76 3523 3523 MS2 17/32 Linfeng_20120125_PCAF_1.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 373 2.96 0.00 0 20 100 3 578.64935 1733.93351 6.55 41.47 5850 5850 MS2 27/60 Linfeng_20120125_PCAF_1.raw High LSELLPEEVEAEVK Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 424 2.86 0.00 0 23 25 3 528.95203 1584.84153 2.99 36.72 3776 3776 MS2 31/52 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 346 2.84 0.00 0 5 25 3 443.22702 1327.66651 1.80 31.62 3127 3127 MS2 22/36 Linfeng_122411_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 299 2.82 0.00 0 35 25 3 638.65033 1913.93644 2.60 50.61 5499 5499 MS2 24/68 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 335 2.72 0.00 0 11 25 2 664.33643 1327.66557 1.10 31.63 3128 3128 MS2 14/18 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 313 2.61 0.00 0 15 25 3 443.22519 1327.66101 -2.33 32.79 3796 3796 MS2 19/36 Linfeng_091311_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 293 2.52 0.00 0 32 25 2 664.33411 1327.66094 -2.39 32.69 3782 3782 MS2 15/18 Linfeng_091311_rIgG_4.raw High SQMDGLIPGVEPR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 347 2.49 0.00 0 15 100 2 699.86084 1398.71440 6.96 40.06 5518 5518 MS2 16/24 Linfeng_20120125_PCAF_1.raw Medium LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 84 2.46 0.00 0 2 25 3 440.93716 1320.79694 -2.21 31.80 3664 3664 MS2 26/48 Linfeng_091311_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 364 2.33 0.00 0 7 100 2 664.33978 1327.67229 6.16 37.42 4897 4897 MS2 15/18 Linfeng_20120125_PCAF_1.raw Medium KLQEVDSLWK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 517 2.32 0.00 1 25 25 3 415.90002 1245.68552 1.36 29.04 2790 2790 MS2 21/36 Linfeng_122411_rIgG_4.raw Medium LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 55 2.32 0.00 0 9 25 3 440.93896 1320.80234 1.88 30.66 3001 3001 MS2 27/48 Linfeng_122411_rIgG_4.raw Medium LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 84 2.31 0.00 0 12 25 3 440.93704 1320.79657 -2.49 31.99 3628 3628 MS2 21/48 Linfeng_091311_rIgG_5.raw High IISDNLTYcK Unambiguous 2 1 IPI00006379.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.27 0.00 0 23 25 2 613.80621 1226.60515 -2.80 26.95 3013 3013 MS2 14/18 Linfeng_091311_rIgG_4.raw High SQMDGLIPGVEPR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 298 2.23 0.00 0 33 100 2 699.86047 1398.71367 6.44 39.84 5470 5470 MS2 14/24 Linfeng_20120125_PCAF_1.raw High LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 83 2.17 0.00 0 33 25 2 660.90216 1320.79704 -2.13 31.87 3673 3673 MS2 20/24 Linfeng_091311_rIgG_4.raw High SQMDGLIPGVEPR Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 355 2.16 0.00 0 27 100 2 699.86072 1398.71416 6.79 40.51 5003 5003 MS2 12/24 Linfeng_20120125_PCAF_4.raw High IISDNLTYcK Unambiguous 2 1 IPI00006379.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.10 0.00 0 39 25 2 613.80945 1226.61162 2.47 22.17 1886 1886 MS2 13/18 Linfeng_122411_rIgG_4.raw High LQEVDSLWK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 503 2.09 0.00 0 16 25 2 559.29688 1117.58647 -2.13 33.80 3925 3925 MS2 13/16 Linfeng_091311_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 355 2.01 0.00 0 9 100 2 664.34052 1327.67375 7.26 37.31 4869 4869 MS2 14/18 Linfeng_20120125_PCAF_1.raw IPI00006900.1 Something about silencing protein 10 9.39 1 4 4 4 12.87 9.39 4 4 479 54.5 5.62 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QSQQEAEEEEREEEEEAQIIQR Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 76 4.61 0.00 1 19 25 3 906.40869 2717.21152 -0.69 29.41 3347 3347 MS2 31/84 Linfeng_091311_rIgG_4.raw High ESPELLELIEDLK Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 371 3.07 0.00 0 21 25 2 764.41113 1527.81499 -0.21 49.97 5976 5976 MS2 18/24 Linfeng_091311_rIgG_4.raw High KESPELLELIEDLK Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 353 2.92 0.00 1 17 25 3 552.64081 1655.90787 -1.46 44.72 5312 5312 MS2 22/52 Linfeng_091311_rIgG_4.raw High YSGELSGIR Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 341 2.27 0.00 0 27 25 2 491.25244 981.49761 -2.46 24.96 2739 2739 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00007047.1 Protein S100-A8 24.73 1 3 3 15 42.12 24.73 3 15 93 10.8 7.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 3.38 0.00 0 32 25 3 474.57266 1421.70343 -4.18 29.44 3456 3456 MS2 26/40 Linfeng_091311_rIgG_10.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 3.24 0.00 0 3 7 2 711.35632 1421.70537 -2.82 29.40 3450 3450 MS2 16/20 Linfeng_091311_rIgG_10.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.24 0.00 0 32 25 3 474.57239 1421.70261 -4.76 29.64 3348 3348 MS2 23/40 Linfeng_091311_rIgG_9.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 3.16 0.00 0 2 25 2 711.35651 1421.70574 -2.56 29.59 3358 3358 MS2 18/20 Linfeng_091311_rIgG_6.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 3.05 0.00 0 3 21 2 711.35614 1421.70500 -3.07 29.60 3343 3343 MS2 17/20 Linfeng_091311_rIgG_7.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 3.03 0.00 0 9 25 2 711.35553 1421.70378 -3.93 29.57 3403 3403 MS2 17/20 Linfeng_091311_rIgG_8.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 392 3.01 0.00 0 20 15 2 711.35608 1421.70488 -3.16 29.57 3338 3338 MS2 16/20 Linfeng_091311_rIgG_9.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 361 2.86 0.00 0 9 25 2 711.35706 1421.70683 -1.79 29.32 3343 3343 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 346 2.65 0.00 0 5 25 2 711.35657 1421.70586 -2.47 29.44 3351 3351 MS2 16/20 Linfeng_091311_rIgG_4.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 347 2.58 0.00 0 9 25 2 711.35620 1421.70513 -2.99 29.58 3305 3305 MS2 15/20 Linfeng_091311_rIgG_5.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 373 2.50 0.00 0 28 25 2 711.35480 1421.70232 -4.96 29.54 3100 3100 MS2 15/20 Linfeng_091311_rIgG_1.raw High LLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 381 2.46 0.00 0 18 25 2 711.35590 1421.70452 -3.42 29.43 3395 3395 MS2 15/20 Linfeng_091311_rIgG_2.raw Medium KLLETEcPQYIR Unambiguous 1 1 IPI00007047.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 2.39 0.00 1 28 25 3 517.27136 1549.79953 -3.10 27.09 3128 3128 MS2 23/44 Linfeng_091311_rIgG_10.raw High ALNSIIDVYHK Unambiguous 1 1 IPI00007047.1 CID 1.0000 0.0000 1 1 529 2.36 0.00 0 27 25 2 636.84943 1272.69158 -2.46 31.53 3740 3740 MS2 17/20 Linfeng_091311_rIgG_10.raw High ALNSIIDVYHK Unambiguous 1 1 IPI00007047.1 CID 1.0000 0.0000 1 1 463 2.23 0.00 0 14 25 2 636.84973 1272.69219 -1.98 31.75 3627 3627 MS2 16/20 Linfeng_091311_rIgG_9.raw IPI00007144.1 60S ribosomal protein L26-like 1 16.55 1 1 4 4 9.08 16.55 4 4 145 17.2 10.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YVIYIER Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 204 2.40 0.00 0 11 25 2 478.26471 955.52214 -2.74 30.87 3512 3512 MS2 11/12 Linfeng_091311_rIgG_9.raw High KDDEVQVVR Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 464 2.34 0.00 1 41 25 2 544.28949 1087.57170 -2.36 18.13 1748 1748 MS2 14/16 Linfeng_091311_rIgG_9.raw Medium YKEELIEK Unambiguous 1 1 IPI00007144.1 CID 1.0000 0.0000 1 1 347 2.28 0.00 1 72 25 3 351.19354 1051.56607 -0.92 20.74 2118 2118 MS2 17/28 Linfeng_091311_rIgG_9.raw High DDEVQVVR Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 263 2.07 0.00 0 29 25 2 480.24133 959.47539 -4.08 22.10 2312 2312 MS2 13/14 Linfeng_091311_rIgG_9.raw IPI00007765.5 "Stress-70 protein, mitochondrial" 40.50 4 24 24 71 59.42 26.95 15 20 72.67 23.71 12 21 93.76 24.89 12 30 679 73.6 6.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 184 5.68 0.00 0 3 25 2 1028.48767 2055.96807 3.00 40.56 4257 4257 MS2 25/36 Linfeng_122411_rIgG_4.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 201 5.46 0.00 0 3 23 3 685.99402 2055.96750 2.73 40.55 4256 4256 MS2 42/72 Linfeng_122411_rIgG_4.raw High ERVEAVNMAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 368 5.42 0.00 1 7 100 3 714.69312 2142.06479 7.06 47.97 6779 6779 MS2 39/72 Linfeng_20120125_PCAF_4.raw High GAVVGIDLGTTNScVAVMEGK Unambiguous 1 1 IPI00007765.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 5.05 0.00 0 0 100 2 1039.52405 2078.04082 7.24 45.26 6136 6136 MS2 25/40 Linfeng_20120125_PCAF_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 396 4.66 0.00 0 18 25 3 603.63977 1808.90476 1.21 28.19 2676 2676 MS2 36/64 Linfeng_122411_rIgG_4.raw High GAVVGIDLGTTNScVAVMEGK Unambiguous 1 1 IPI00007765.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 4.51 0.00 0 0 100 2 1039.52283 2078.03838 6.06 45.35 6157 6157 MS2 24/40 Linfeng_20120125_PCAF_4.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 135 4.48 0.00 0 10 25 2 1028.48291 2055.95854 -1.63 41.65 4928 4928 MS2 25/36 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 404 4.20 0.00 0 16 25 3 549.29956 1645.88413 2.73 35.24 3589 3589 MS2 37/60 Linfeng_122411_rIgG_4.raw High VEAVNMAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 339 4.18 0.00 0 7 100 2 928.96283 1856.91838 6.69 48.17 6828 6828 MS2 23/32 Linfeng_20120125_PCAF_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 353 4.13 0.00 0 0 25 2 904.95776 1808.90825 3.15 27.81 2625 2625 MS2 23/32 Linfeng_122411_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 439 4.12 0.00 0 5 17 3 549.29669 1645.87552 -2.50 36.38 4260 4260 MS2 37/60 Linfeng_091311_rIgG_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 410 4.09 0.00 0 5 25 3 454.58432 1361.73841 -2.94 41.98 4969 4969 MS2 29/44 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 337 4.08 0.00 0 4 25 2 823.44543 1645.88359 2.40 35.30 3596 3596 MS2 26/30 Linfeng_122411_rIgG_4.raw High MEEFKDQLPADEcNK Unambiguous 2 1 IPI00007765.5 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 3.94 0.00 1 1 100 2 927.41241 1853.81755 7.03 26.37 1974 1974 MS2 24/28 Linfeng_20120125_PCAF_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 366 3.92 0.00 0 1 25 3 454.58698 1361.74637 2.91 40.66 4270 4270 MS2 30/44 Linfeng_122411_rIgG_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 359 3.92 0.00 0 11 100 2 904.96057 1808.91387 6.25 30.56 2557 2557 MS2 22/32 Linfeng_20120125_PCAF_3.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 160 3.85 0.00 0 26 25 3 685.99042 2055.95670 -2.53 41.61 4923 4923 MS2 40/72 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 369 3.81 0.00 0 5 100 2 823.44525 1645.88323 2.18 43.56 5722 5722 MS2 24/30 Linfeng_20120125_PCAF_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 335 3.79 0.00 0 4 25 2 681.37701 1361.74675 3.19 40.65 4269 4269 MS2 19/22 Linfeng_122411_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 458 3.71 0.00 0 3 25 3 414.89893 1242.68222 1.68 33.38 3354 3354 MS2 30/44 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 330 3.63 0.00 0 5 25 3 565.62250 1694.85294 1.90 34.76 3530 3530 MS2 31/56 Linfeng_122411_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 346 3.61 0.00 0 7 100 2 823.44745 1645.88762 4.85 43.65 5431 5431 MS2 23/30 Linfeng_20120125_PCAF_3.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 377 3.57 0.00 0 13 25 2 681.37329 1361.73931 -2.28 41.90 4959 4959 MS2 19/22 Linfeng_091311_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 421 3.53 0.00 0 16 25 2 621.84161 1242.67595 -3.37 34.51 4017 4017 MS2 20/22 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDKSEDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 289 3.48 0.00 1 0 100 2 1053.04968 2105.09209 7.55 42.46 5457 5457 MS2 19/38 Linfeng_20120125_PCAF_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 17 16 2 823.44067 1645.87407 -3.38 36.37 4258 4258 MS2 25/30 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 373 3.40 0.00 0 4 100 2 823.44556 1645.88384 2.55 43.58 5727 5727 MS2 24/30 Linfeng_20120125_PCAF_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 436 3.39 0.00 0 5 16 2 621.84485 1242.68242 1.83 33.22 3333 3333 MS2 20/22 Linfeng_122411_rIgG_4.raw High GAVVGIDLGTTNScVAVMEGK Unambiguous 1 1 IPI00007765.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 286 3.27 0.00 0 7 100 2 1039.52344 2078.03960 6.65 45.92 6295 6295 MS2 22/40 Linfeng_20120125_PCAF_4.raw High EQQIVIQSSGGLSKDDIENMVK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 342 3.19 0.00 1 0 100 2 1209.62195 2418.23662 7.62 41.62 5262 5262 MS2 20/42 Linfeng_20120125_PCAF_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 409 3.19 0.00 0 8 100 2 621.84796 1242.68865 6.84 38.87 4623 4623 MS2 18/22 Linfeng_20120125_PCAF_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 350 3.17 0.00 0 14 25 3 565.61969 1694.84452 -3.07 35.91 4199 4199 MS2 33/56 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 407 3.17 0.00 0 13 100 3 549.30072 1645.88761 4.84 44.07 5849 5849 MS2 32/60 Linfeng_20120125_PCAF_4.raw High ERVEAVNMAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 385 3.14 0.00 1 13 100 4 536.27234 2142.06753 8.34 47.99 6784 6784 MS2 34/108 Linfeng_20120125_PCAF_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 547 3.12 0.00 0 18 25 3 430.89868 1290.68149 1.05 32.08 3187 3187 MS2 22/40 Linfeng_122411_rIgG_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 336 3.05 0.00 0 26 100 2 725.86737 1450.72746 6.99 31.87 3014 3014 MS2 18/26 Linfeng_20120125_PCAF_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 45 2.96 0.00 0 8 25 3 531.65723 1592.95713 2.99 42.22 4467 4467 MS2 29/56 Linfeng_122411_rIgG_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 327 2.94 0.00 0 11 25 2 725.86102 1450.71477 -1.76 30.76 3529 3529 MS2 20/26 Linfeng_091311_rIgG_4.raw High QAVTNPNNTFYATK Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 254 2.89 0.00 0 1 25 2 784.88739 1568.76750 -1.84 25.15 2767 2767 MS2 19/26 Linfeng_091311_rIgG_4.raw High QATKDAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 383 2.85 0.00 1 19 25 3 557.64563 1670.92234 2.30 27.70 2611 2611 MS2 29/60 Linfeng_122411_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 449 2.79 0.00 0 2 16 2 645.84406 1290.68083 0.54 32.01 3177 3177 MS2 17/20 Linfeng_122411_rIgG_4.raw High SDIGEVILVGGMTR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 411 2.78 0.00 0 40 100 2 723.88916 1446.77104 6.13 48.33 6866 6866 MS2 22/26 Linfeng_20120125_PCAF_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 357 2.71 0.00 0 14 100 2 904.96094 1808.91460 6.65 30.17 2670 2670 MS2 19/32 Linfeng_20120125_PCAF_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 438 2.66 0.00 0 35 25 2 645.84222 1290.67717 -2.29 33.33 3864 3864 MS2 17/20 Linfeng_091311_rIgG_4.raw High MEEFKDQLPADEcNK Unambiguous 2 1 IPI00007765.5 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.66 0.00 1 37 100 3 618.61029 1853.81632 6.36 27.08 2103 2103 MS2 26/56 Linfeng_20120125_PCAF_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 41 2.62 0.00 0 10 25 2 796.98236 1592.95745 3.19 42.23 4468 4468 MS2 20/28 Linfeng_122411_rIgG_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 45 2.62 0.00 0 9 25 2 796.97852 1592.94975 -1.64 43.71 5188 5188 MS2 21/28 Linfeng_091311_rIgG_4.raw High VEAVNMAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 362 2.60 0.00 0 9 27 3 619.64423 1856.91812 6.56 48.19 6830 6830 MS2 30/64 Linfeng_20120125_PCAF_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 361 2.59 0.00 0 3 100 2 904.96112 1808.91496 6.86 31.62 2960 2960 MS2 21/32 Linfeng_20120125_PCAF_4.raw High EQQIVIQSSGGLSK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 348 2.56 0.00 0 22 25 2 737.39673 1473.78618 -3.14 26.77 2989 2989 MS2 23/26 Linfeng_091311_rIgG_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 52 2.52 0.00 0 42 25 3 531.65753 1592.95804 3.57 43.51 4629 4629 MS2 20/56 Linfeng_122411_rIgG_4.raw High MEEFKDQLPADEcNK Unambiguous 2 1 IPI00007765.5 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.51 0.00 1 21 100 3 618.61011 1853.81577 6.07 27.03 2093 2093 MS2 26/56 Linfeng_20120125_PCAF_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 345 2.46 0.00 0 20 25 2 725.86389 1450.72051 2.20 29.25 2818 2818 MS2 18/26 Linfeng_122411_rIgG_4.raw Medium LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 60 2.36 0.00 0 7 25 3 531.65472 1592.94962 -1.72 43.63 5177 5177 MS2 23/56 Linfeng_091311_rIgG_4.raw High DSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 134 2.36 0.00 0 30 25 2 510.73230 1020.45732 -1.93 16.25 1518 1518 MS2 13/16 Linfeng_091311_rIgG_4.raw High QAASSLQQASLK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 492 2.36 0.00 0 5 20 2 616.33600 1231.66472 0.47 3.30 335 335 MS2 18/22 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 288 2.35 0.00 0 4 100 2 847.93549 1694.86370 8.24 43.08 5604 5604 MS2 19/28 Linfeng_20120125_PCAF_4.raw Medium EQQIVIQSSGGLSKDDIENMVK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 407 2.34 0.00 1 16 100 3 806.75043 2418.23673 7.66 41.89 5324 5324 MS2 25/84 Linfeng_20120125_PCAF_4.raw High QAASSLQQASLK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 509 2.32 0.00 0 8 19 2 616.33295 1231.65862 -4.49 21.90 2313 2313 MS2 19/22 Linfeng_091311_rIgG_4.raw Medium EQQIVIQSSGGLSKDDIENMVK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 410 2.30 0.00 1 32 100 3 806.74988 2418.23508 6.98 41.26 5177 5177 MS2 24/84 Linfeng_20120125_PCAF_4.raw Medium MEEFKDQLPADEcNK Unambiguous 2 1 IPI00007765.5 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 99 2.28 0.00 1 8 92 3 618.61023 1853.81614 6.26 26.85 2060 2060 MS2 26/56 Linfeng_20120125_PCAF_4.raw High VLENAEGAR Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 341 2.24 0.00 0 37 25 2 479.75024 958.49321 -2.17 16.84 1601 1601 MS2 14/16 Linfeng_091311_rIgG_4.raw High QAVTNPNNTFYATK Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 292 2.24 0.00 0 2 4 2 784.88843 1568.76958 -0.52 4.10 462 462 MS2 15/26 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 325 2.17 0.00 0 19 100 2 847.93451 1694.86174 7.09 42.59 5173 5173 MS2 13/28 Linfeng_20120125_PCAF_3.raw High KDSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 319 2.12 0.00 1 16 25 2 574.78021 1148.55315 -0.97 11.27 902 902 MS2 13/18 Linfeng_091311_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 503 2.10 0.00 0 14 25 2 645.84375 1290.68022 0.07 32.15 3051 3051 MS2 16/20 Linfeng_122411_rIgG_3.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 344 2.08 0.00 0 8 100 2 725.86731 1450.72734 6.91 34.38 3596 3596 MS2 19/26 Linfeng_20120125_PCAF_4.raw High DQLPADEcNK Unambiguous 2 1 IPI00007765.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 2.06 0.00 0 22 25 2 595.25964 1189.51201 -2.88 18.27 1803 1803 MS2 13/18 Linfeng_091311_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 411 2.04 0.00 0 21 100 2 621.84814 1242.68901 7.14 38.96 4357 4357 MS2 16/22 Linfeng_20120125_PCAF_3.raw High KDSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 326 2.03 0.00 1 14 25 2 574.77972 1148.55217 -1.82 10.25 822 822 MS2 13/18 Linfeng_091311_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 345 2.03 0.00 0 38 100 2 847.93481 1694.86235 7.45 41.67 5274 5274 MS2 14/28 Linfeng_20120125_PCAF_4.raw IPI00007928.4 Pre-mRNA-processing-splicing factor 8 14.35 1 24 24 34 30.01 3.51 6 10 57.80 10.41 18 19 14.45 3.47 5 5 2335 273.4 8.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TNHIYVSSDDIKETGYTYILPK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 327 4.60 0.00 1 46 25 4 640.07642 2557.28383 0.67 32.78 3162 3162 MS2 41/126 Linfeng_122411_rIgG_2.raw High SQEPLPDDDEEFELPEFVEPFLK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 205 4.47 0.00 0 2 25 3 917.10138 2749.28958 4.64 50.10 5354 5354 MS2 28/88 Linfeng_122411_rIgG_2.raw High YIQPWESEFIDSQR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 226 4.12 0.00 0 13 25 3 599.95441 1797.84867 2.43 38.03 3826 3826 MS2 30/52 Linfeng_122411_rIgG_2.raw High SQEPLPDDDEEFELPEFVEPFLK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 199 3.97 0.00 0 52 25 3 917.09790 2749.27915 0.84 51.29 6214 6214 MS2 32/88 Linfeng_091311_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 257 3.95 0.00 0 25 25 3 561.99091 1683.95816 3.18 48.19 5115 5115 MS2 26/56 Linfeng_122411_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 281 3.85 0.00 0 10 25 2 842.48285 1683.95842 3.33 48.14 5109 5109 MS2 22/28 Linfeng_122411_rIgG_2.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 222 3.67 0.00 0 66 25 2 880.91840 1760.82952 -1.38 48.11 5815 5815 MS2 21/26 Linfeng_091311_rIgG_2.raw High TAEEVAALIR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 571 3.62 0.00 0 16 25 2 536.80408 1072.60088 1.04 30.52 2870 2870 MS2 17/18 Linfeng_122411_rIgG_2.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 218 3.57 0.00 0 43 25 2 880.91833 1760.82939 -1.45 47.87 5539 5539 MS2 20/26 Linfeng_091311_rIgG_1.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 229 3.32 0.00 0 5 25 2 880.92303 1760.83879 3.89 47.11 4978 4978 MS2 19/26 Linfeng_122411_rIgG_2.raw High NNVNVASLTQSEIR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 456 3.25 0.00 0 20 100 2 772.90948 1544.81169 5.78 34.66 4230 4230 MS2 20/26 Linfeng_20120125_PCAF_1.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 287 3.19 0.00 0 38 25 2 842.47937 1683.95146 -0.80 49.37 5972 5972 MS2 20/28 Linfeng_091311_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 312 3.12 0.00 0 33 25 3 561.98859 1683.95121 -0.95 49.16 5704 5704 MS2 26/56 Linfeng_091311_rIgG_1.raw High DINLQDEDWNEFNDINK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 78 2.99 0.00 0 7 100 2 1061.47827 2121.94927 6.22 46.40 7037 7037 MS2 21/32 Linfeng_20120125_PCAF_1.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 281 2.95 0.00 0 65 25 2 842.47980 1683.95232 -0.29 49.12 5699 5699 MS2 19/28 Linfeng_091311_rIgG_1.raw High LTLEDLEDSWDR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 242 2.90 0.00 0 23 25 2 746.35443 1491.70159 3.58 43.05 4460 4460 MS2 19/22 Linfeng_122411_rIgG_2.raw High EELGLIEQAYDNPHEALSR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 303 2.82 0.00 0 17 100 3 728.69440 2184.06864 5.40 43.69 6384 6384 MS2 23/72 Linfeng_20120125_PCAF_1.raw High AQIAGYLYGVSPPDNPQVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 329 2.78 0.00 0 16 100 2 1009.03021 2017.05315 7.02 41.40 5833 5833 MS2 19/36 Linfeng_20120125_PCAF_1.raw High TDMIQALGGVEGILEHTLFK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 342 2.78 0.00 0 17 25 3 724.72070 2172.14756 4.85 55.00 5918 5918 MS2 28/76 Linfeng_122411_rIgG_2.raw High HGDEIITSTTSNYETQTFSSK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 159 2.72 0.00 0 4 25 3 782.69775 2346.07871 2.33 27.99 2536 2536 MS2 28/80 Linfeng_122411_rIgG_2.raw Medium TEDPDLPAFYFDPLINPISHR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 334 2.64 0.00 0 15 25 4 615.05908 2457.21450 2.40 45.69 4798 4798 MS2 33/120 Linfeng_122411_rIgG_2.raw High DGVWNLQNEVTK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 423 2.61 0.00 0 43 100 2 701.85565 1402.70403 5.59 39.18 5317 5317 MS2 17/22 Linfeng_20120125_PCAF_1.raw High LLILALER Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 49 2.61 0.00 0 15 25 2 470.81314 940.61901 -0.03 37.47 3755 3755 MS2 13/14 Linfeng_122411_rIgG_2.raw High TAEEVAALIR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 541 2.55 0.00 0 21 25 2 536.80151 1072.59575 -3.74 32.16 3448 3448 MS2 17/18 Linfeng_091311_rIgG_1.raw High VESHFDLELR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 463 2.55 0.00 0 19 25 3 415.54807 1244.62964 2.10 29.23 2701 2701 MS2 20/36 Linfeng_122411_rIgG_2.raw High EQSQLTATQTR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 398 2.50 0.00 0 20 25 2 631.81921 1262.63115 -1.91 17.71 1734 1734 MS2 12/20 Linfeng_091311_rIgG_3.raw High IDLTLLNR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 294 2.48 0.00 0 34 25 2 479.29071 957.57414 1.40 34.78 3416 3416 MS2 13/14 Linfeng_122411_rIgG_2.raw Medium EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 304 2.47 0.00 0 34 25 3 561.98816 1683.94992 -1.71 49.42 5979 5979 MS2 24/56 Linfeng_091311_rIgG_2.raw High ISLIQIFR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 78 2.40 0.00 0 3 25 2 495.31213 989.61699 2.75 41.45 4258 4258 MS2 13/14 Linfeng_122411_rIgG_2.raw High ANPALYVLR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 495 2.35 0.00 0 17 25 2 508.79892 1016.59056 1.75 31.01 2934 2934 MS2 14/16 Linfeng_122411_rIgG_2.raw High FIcISDLR Unambiguous 1 1 IPI00007928.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 387 2.32 0.00 0 30 25 2 512.26892 1023.53057 1.31 33.55 3259 3259 MS2 13/14 Linfeng_122411_rIgG_2.raw High YYVLNALK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 303 2.06 0.00 0 14 25 2 492.28238 983.55748 1.44 31.83 3040 3040 MS2 12/14 Linfeng_122411_rIgG_2.raw High FSPIPFPPLSYK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 382 2.05 0.00 0 25 25 2 696.88330 1392.75932 2.21 41.43 4255 4255 MS2 14/22 Linfeng_122411_rIgG_2.raw High ANPALYVLR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 602 2.02 0.00 0 10 25 2 508.79517 1016.58306 -5.63 32.73 3524 3524 MS2 11/16 Linfeng_091311_rIgG_1.raw IPI00008359.1 "Keratin, type II cytoskeletal 2 oral" 16.93 2 2 14 99 112.90 10.66 8 50 70.55 11.76 10 27 56.35 6.43 4 22 638 65.8 8.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 187 2.47 0.00 0 3 18 2 570.27686 1139.54643 5.49 32.80 3776 3776 MS2 13/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw Medium cLDLGSIIAEVRTQYEEIAQRSK Unambiguous 1 1 IPI00008359.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 334 2.37 0.00 2 9 25 3 893.79083 2679.35794 -7.17 42.86 5149 5149 MS2 16/88 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High SMQDLVEDFK Unambiguous 1 1 IPI00008359.1 CID 1.0000 0.0000 1 1 148 2.33 0.00 0 0 25 2 606.28308 1211.55889 -2.02 32.05 2823 2823 MS2 13/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 414 2.26 0.00 2 6 100 2 597.81274 1194.61821 5.73 14.55 918 918 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00008557.6 Insulin-like growth factor 2 mRNA-binding protein 1 34.14 2 13 15 38 43.66 29.12 13 15 30.91 15.60 6 10 33.54 15.60 6 13 577 63.4 9.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 345 4.33 0.00 0 8 25 2 938.48688 1875.96648 -1.83 37.23 4368 4368 MS2 24/32 Linfeng_091311_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 271 4.30 0.00 0 3 22 3 618.34399 1853.01743 2.50 37.23 3841 3841 MS2 38/64 Linfeng_122411_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 335 4.12 0.00 0 75 25 3 621.66803 1862.98954 1.96 41.05 4319 4319 MS2 32/60 Linfeng_122411_rIgG_4.raw High LLVPTQYVGAIIGK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 108 3.86 0.00 0 7 25 3 491.29971 1471.88459 -2.55 42.75 5066 5066 MS2 28/52 Linfeng_091311_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 336 3.78 0.00 0 9 100 2 938.49451 1875.98174 6.30 44.41 5931 5931 MS2 24/32 Linfeng_20120125_PCAF_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 353 3.71 0.00 0 2 25 3 621.66583 1862.98294 -1.58 42.18 4994 4994 MS2 32/60 Linfeng_091311_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 307 3.69 0.00 0 22 25 3 618.34076 1853.00772 -2.73 38.40 4516 4516 MS2 35/64 Linfeng_091311_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 319 3.63 0.00 0 14 25 2 931.99512 1862.98296 -1.57 42.17 4993 4993 MS2 19/30 Linfeng_091311_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 332 3.54 0.00 0 24 25 2 931.99890 1862.99053 2.49 41.09 4324 4324 MS2 20/30 Linfeng_122411_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 366 3.50 0.00 0 4 25 2 938.49133 1875.97539 2.92 36.36 3730 3730 MS2 19/32 Linfeng_122411_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 248 3.44 0.00 0 2 25 2 927.01288 1853.01848 3.07 37.30 3849 3849 MS2 22/32 Linfeng_122411_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 232 3.30 0.00 0 14 100 2 927.01703 1853.02678 7.55 46.89 6524 6524 MS2 21/32 Linfeng_20120125_PCAF_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 286 3.29 0.00 0 10 25 2 927.00787 1853.00847 -2.33 38.46 4524 4524 MS2 22/32 Linfeng_091311_rIgG_4.raw High AISVHSTPEGcSSAcK Unambiguous 1 1 IPI00008557.6 C11(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 2.92 0.00 0 2 25 3 564.25439 1690.74863 -2.23 18.42 1824 1824 MS2 31/60 Linfeng_091311_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 368 2.85 0.00 0 8 25 3 625.99603 1875.97354 1.94 36.35 3729 3729 MS2 26/64 Linfeng_122411_rIgG_4.raw High SGYAFVDcPDEHWAMK Unambiguous 2 1 IPI00008557.6 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 47 2.74 0.00 0 0 100 2 956.91022 1912.81316 7.21 41.62 5263 5263 MS2 17/30 Linfeng_20120125_PCAF_4.raw High LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 298 2.72 0.00 1 40 100 3 403.55136 1208.63953 7.01 30.90 2813 2813 MS2 23/36 Linfeng_20120125_PCAF_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 234 2.62 0.00 0 26 100 3 618.34790 1853.02915 8.83 46.94 6536 6536 MS2 27/64 Linfeng_20120125_PCAF_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00940014.1;IPI00922068.1 CID 1.0000 0.0000 1 1 439 2.60 0.00 0 7 100 2 715.89459 1430.78191 7.43 41.55 5246 5246 MS2 15/24 Linfeng_20120125_PCAF_4.raw High RLEIEHSVPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 334 2.59 0.00 1 17 25 3 403.23035 1207.67649 -2.41 20.50 2119 2119 MS2 20/36 Linfeng_091311_rIgG_4.raw High VSYIPDEQIAQGPENGR Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 233 2.57 0.00 0 6 100 2 936.96094 1872.91460 3.14 32.84 3238 3238 MS2 19/32 Linfeng_20120125_PCAF_4.raw High DQTPDENDQVIVK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 169 2.49 0.00 0 7 25 2 750.86041 1500.71355 -2.77 24.30 2648 2648 MS2 19/24 Linfeng_091311_rIgG_4.raw High DQTPDENDQVIVK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 194 2.38 0.00 0 28 9 2 750.86218 1500.71709 -0.41 4.03 451 451 MS2 19/24 Linfeng_122411_rIgG_4.raw Medium LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 403 2.37 0.00 1 15 25 3 403.54724 1208.62717 -3.22 27.43 3079 3079 MS2 21/36 Linfeng_091311_rIgG_4.raw Medium LLVPTQYVGAIIGK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 74 2.37 0.00 0 10 25 3 491.30197 1471.89136 2.05 41.52 4378 4378 MS2 25/52 Linfeng_122411_rIgG_4.raw High LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 293 2.35 0.00 1 23 100 2 604.82324 1208.63921 6.74 31.33 2901 2901 MS2 14/18 Linfeng_20120125_PCAF_4.raw Medium ILAHNNFVGR Unambiguous 4 2 IPI00008557.6;IPI00940014.1 CID 1.0000 0.0000 1 1 290 2.31 0.00 0 8 25 3 380.87949 1140.62390 -2.98 22.53 2400 2400 MS2 17/36 Linfeng_091311_rIgG_4.raw Medium LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 296 2.31 0.00 1 33 100 3 403.55127 1208.63926 6.78 30.78 2791 2791 MS2 19/36 Linfeng_20120125_PCAF_4.raw Medium LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 297 2.26 0.00 1 44 100 3 403.55124 1208.63916 6.70 30.69 2774 2774 MS2 18/36 Linfeng_20120125_PCAF_4.raw High LLVPTQYVGAIIGK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 60 2.24 0.00 0 9 25 2 736.45001 1471.89275 2.99 41.30 4350 4350 MS2 21/26 Linfeng_122411_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 331 2.21 0.00 0 27 100 2 938.49573 1875.98418 7.61 45.04 6084 6084 MS2 18/32 Linfeng_20120125_PCAF_4.raw High TADEVPLK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 279 2.18 0.00 0 37 25 2 436.73862 872.46996 -2.82 21.26 2223 2223 MS2 12/14 Linfeng_091311_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00940014.1;IPI00922068.1 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw High VSYIPDEQIAQGPENGR Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 249 2.17 0.00 0 5 25 2 936.95483 1872.90239 -3.37 30.97 3556 3556 MS2 14/32 Linfeng_091311_rIgG_4.raw High VPASAAGR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 224 2.06 0.00 0 53 25 2 364.70566 728.40404 -1.33 2.80 255 255 MS2 13/14 Linfeng_091311_rIgG_4.raw High QGSPVAAGAPAK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 265 2.06 0.00 0 29 25 2 527.28699 1053.56670 -2.00 17.01 1624 1624 MS2 12/22 Linfeng_091311_rIgG_4.raw High LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 318 2.04 0.00 1 49 100 2 604.82428 1208.64128 8.46 31.04 2842 2842 MS2 13/18 Linfeng_20120125_PCAF_4.raw High LKEENFFGPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 293 2.04 0.00 1 27 100 2 604.82324 1208.63921 6.74 31.38 2911 2911 MS2 13/18 Linfeng_20120125_PCAF_4.raw IPI00009328.4 Eukaryotic initiation factor 4A-III 11.92 1 3 4 5 12.99 11.92 4 5 0.00 0.00 411 46.8 6.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLDVPQVSLIINYDLPNNR Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 322 2.97 0.00 0 32 25 3 714.05151 2140.13999 0.10 45.10 5322 5322 MS2 29/72 Linfeng_091311_rIgG_5.raw High DVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 363 2.88 0.00 0 9 25 2 595.80206 1190.59685 -3.66 18.37 1782 1782 MS2 19/22 Linfeng_091311_rIgG_5.raw High GRDVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 496 2.71 0.00 1 43 25 3 468.57947 1403.72385 0.03 15.79 1424 1424 MS2 24/52 Linfeng_091311_rIgG_5.raw Medium GIYAYGFEKPSAIQQR Unambiguous 2 2 IPI00025491.1;IPI00009328.4 CID 1.0000 0.0000 1 1 373 2.30 0.00 0 39 25 3 609.98218 1827.93198 -3.77 30.62 3498 3498 MS2 19/60 Linfeng_091311_rIgG_6.raw High DVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 351 2.13 0.00 0 41 25 2 595.80255 1190.59783 -2.84 18.58 1862 1862 MS2 13/22 Linfeng_091311_rIgG_6.raw IPI00009471.1 WD repeat-containing protein 3 24.71 1 14 14 26 40.89 15.80 8 12 34.95 15.80 9 10 12.27 4.98 3 4 943 106.0 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 403 5.08 0.00 0 39 25 3 670.00757 2008.00815 2.92 50.91 5456 5456 MS2 33/64 Linfeng_122411_rIgG_3.raw High AVFLLQNNLVELYSLNPSLPTPQPVR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 121 4.82 0.00 0 15 25 3 974.87537 2922.61155 0.91 49.96 5975 5975 MS2 31/100 Linfeng_091311_rIgG_4.raw High TLQLDEDVLcVSYSPNQK Unambiguous 1 1 IPI00009471.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 301 4.80 0.00 0 9 25 3 703.67761 2109.01828 0.64 37.18 3692 3692 MS2 33/68 Linfeng_122411_rIgG_3.raw High VWDIAYLQEIEDPEEPDPK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 275 4.75 0.00 0 14 25 3 762.70007 2286.08567 1.89 43.12 4460 4460 MS2 36/72 Linfeng_122411_rIgG_3.raw High VWDIAYLQEIEDPEEPDPK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 247 4.45 0.00 0 19 25 3 762.69769 2286.07853 -1.23 44.09 5237 5237 MS2 32/72 Linfeng_091311_rIgG_3.raw High AVFLLQNNLVELYSLNPSLPTPQPVR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 126 4.18 0.00 0 13 25 3 974.87433 2922.60843 -0.15 49.83 5960 5960 MS2 31/100 Linfeng_091311_rIgG_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 348 4.06 0.00 0 59 25 2 1004.50745 2008.00762 2.66 52.13 6220 6220 MS2 25/32 Linfeng_091311_rIgG_3.raw High EAEYEESVAKEDQPAVPGETQGDSYFTGK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 95 3.83 0.00 1 25 100 3 1054.48376 3161.43674 9.38 34.28 3326 3326 MS2 34/112 Linfeng_20120125_PCAF_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 386 3.83 0.00 0 27 25 3 670.00659 2008.00522 1.46 52.04 6212 6212 MS2 29/64 Linfeng_091311_rIgG_3.raw High TLQLDEDVLcVSYSPNQK Unambiguous 1 1 IPI00009471.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 261 3.45 0.00 0 0 100 2 1055.02014 2109.03301 7.62 45.94 5989 5989 MS2 24/34 Linfeng_20120125_PCAF_3.raw High TEVWGLVLLSEEK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 467 3.38 0.00 0 27 25 2 751.90906 1502.81084 0.45 43.76 4544 4544 MS2 19/24 Linfeng_122411_rIgG_3.raw High LASGSKDTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 308 3.34 0.00 1 10 25 3 851.10876 2551.31174 3.05 45.92 4824 4824 MS2 29/88 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 300 3.11 0.00 0 17 25 2 574.32813 1147.64897 1.68 41.00 4186 4186 MS2 17/18 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 246 3.07 0.00 0 15 25 2 574.32593 1147.64458 -2.15 42.08 4986 4986 MS2 16/18 Linfeng_091311_rIgG_3.raw High ILAcHGTDSVLELFcILSK Unambiguous 1 1 IPI00009471.1 C4(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 375 3.05 0.00 0 11 25 3 726.04382 2176.11692 1.26 49.04 5859 5859 MS2 25/72 Linfeng_091311_rIgG_3.raw High GSSPGIQDTLEAEDGAFETDEAPEDR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 48 3.03 0.00 0 23 25 3 912.73224 2736.18216 2.39 35.27 3450 3450 MS2 23/100 Linfeng_122411_rIgG_3.raw High TLSFSSDNIAVLSAAADSIK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 323 2.99 0.00 0 38 25 3 670.68384 2010.03696 -1.05 43.98 5221 5221 MS2 26/76 Linfeng_091311_rIgG_4.raw High EAEYEESVAKEDQPAVPGETQGDSYFTGK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 98 2.91 0.00 1 0 100 3 1054.48242 3161.43271 8.11 34.18 3303 3303 MS2 34/112 Linfeng_20120125_PCAF_3.raw High TLSFSSDNIAVLSAAADSIK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 323 2.85 0.00 0 33 25 3 670.68390 2010.03714 -0.96 43.90 5213 5213 MS2 27/76 Linfeng_091311_rIgG_3.raw High EAEYEESVAKEDQPAVPGETQGDSYFTGK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 46 2.84 0.00 1 1 25 3 1054.47180 3161.40085 -1.97 31.31 3607 3607 MS2 23/112 Linfeng_091311_rIgG_3.raw High ILAcHGTDSVLELFcILSK Unambiguous 1 1 IPI00009471.1 C4(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 369 2.54 0.00 0 24 25 3 726.04504 2176.12058 2.95 48.08 5099 5099 MS2 23/72 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 254 2.53 0.00 0 29 25 2 574.32605 1147.64482 -1.93 42.34 4981 4981 MS2 16/18 Linfeng_091311_rIgG_9.raw High SSELEESLLVLPFSYVPDILK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 204 2.48 0.00 0 19 25 2 1189.64563 2378.28398 4.10 55.20 5952 5952 MS2 13/40 Linfeng_122411_rIgG_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 380 2.45 0.00 0 18 25 2 1004.50903 2008.01079 4.24 51.03 5471 5471 MS2 12/32 Linfeng_122411_rIgG_3.raw High GNIVFVTLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 183 2.23 0.00 0 10 25 2 509.80420 1018.60112 -3.26 35.81 4194 4194 MS2 14/16 Linfeng_091311_rIgG_3.raw High EDQPAVPGETQGDSYFTGK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 97 2.08 0.00 0 0 100 2 1013.46277 2025.91826 7.19 31.90 2812 2812 MS2 16/36 Linfeng_20120125_PCAF_3.raw IPI00009865.4 "Keratin, type I cytoskeletal 10" 60.79 2 29 33 1050 1308.99 57.88 29 367 1014.77 55.82 31 275 1203.69 41.95 23 408 584 58.8 5.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 147 6.71 0.00 1 3 25 3 1018.21655 3052.63510 2.51 50.81 5822 5822 MS2 36/104 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 145 6.67 0.00 1 24 25 3 1018.21661 3052.63529 2.57 51.66 6014 6014 MS2 37/104 Linfeng_091311_rIgG_1.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 6.65 0.00 0 2 25 4 687.36237 2746.42763 3.02 52.37 6017 6017 MS2 50/132 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 6.55 0.00 1 1 25 3 1018.21796 3052.63932 3.89 52.87 5690 5690 MS2 36/104 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 6.39 0.00 0 4 25 3 789.76117 2367.26896 2.62 43.78 4547 4547 MS2 41/80 Linfeng_122411_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 269 6.33 0.00 0 7 25 3 789.75781 2367.25888 -1.64 44.85 5330 5330 MS2 39/80 Linfeng_091311_rIgG_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 6.31 0.00 0 3 21 3 789.75836 2367.26053 -0.94 43.87 4565 4565 MS2 38/80 Linfeng_122411_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 6.31 0.00 1 18 25 3 1018.21387 3052.62705 -0.13 51.92 6292 6292 MS2 35/104 Linfeng_091311_rIgG_8.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 274 6.27 0.00 0 21 21 3 789.75714 2367.25687 -2.49 44.54 5114 5114 MS2 41/80 Linfeng_091311_rIgG_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 6.25 0.00 0 25 25 3 789.75830 2367.26035 -1.02 44.70 5381 5381 MS2 38/80 Linfeng_091311_rIgG_2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 6.24 0.00 0 5 25 3 916.14764 2746.42838 3.29 52.36 6016 6016 MS2 40/88 Linfeng_122411_rIgG_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 6.19 0.00 0 48 25 3 789.75763 2367.25833 -1.87 45.03 5320 5320 MS2 37/80 Linfeng_091311_rIgG_7.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 146 6.18 0.00 1 0 25 3 1018.21692 3052.63620 2.87 51.86 5571 5571 MS2 35/104 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 6.17 0.00 0 44 25 3 789.75677 2367.25577 -2.95 44.70 5314 5314 MS2 39/80 Linfeng_091311_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 6.16 0.00 1 1 25 3 1018.21869 3052.64151 4.61 50.86 5450 5450 MS2 35/104 Linfeng_122411_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 6.12 0.00 1 2 25 3 1018.21863 3052.64133 4.55 54.02 5815 5815 MS2 32/104 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 279 6.12 0.00 0 4 15 3 789.75739 2367.25760 -2.18 45.04 5327 5327 MS2 39/80 Linfeng_091311_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 6.10 0.00 1 1 25 3 1018.21814 3052.63987 4.07 50.69 5428 5428 MS2 36/104 Linfeng_122411_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 278 5.98 0.00 0 43 25 3 789.75983 2367.26493 0.91 43.69 4907 4907 MS2 39/80 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 5.96 0.00 1 24 25 3 1018.21191 3052.62119 -2.05 51.73 6267 6267 MS2 33/104 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 147 5.93 0.00 1 22 25 3 1018.21594 3052.63327 1.91 51.98 6160 6160 MS2 35/104 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.92 0.00 1 13 25 3 1018.21527 3052.63126 1.25 51.82 6188 6188 MS2 33/104 Linfeng_091311_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 5.90 0.00 0 13 25 3 789.75824 2367.26017 -1.10 44.96 5473 5473 MS2 40/80 Linfeng_091311_rIgG_10.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 5.89 0.00 0 15 25 4 687.36285 2746.42959 3.73 52.49 5651 5651 MS2 45/132 Linfeng_122411_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 5.84 0.00 0 31 13 3 789.75787 2367.25907 -1.56 45.07 5425 5425 MS2 38/80 Linfeng_091311_rIgG_8.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 5.82 0.00 0 5 25 3 916.14880 2746.43186 4.56 52.40 5640 5640 MS2 38/88 Linfeng_122411_rIgG_3.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 287 5.82 0.00 0 20 25 4 687.36212 2746.42666 2.67 54.08 6424 6424 MS2 49/132 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 5.78 0.00 0 0 25 2 1171.99915 2342.99101 2.80 35.08 3454 3454 MS2 28/52 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 5.76 0.00 0 0 25 2 1171.99878 2342.99028 2.48 35.13 3432 3432 MS2 26/52 Linfeng_122411_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 5.76 0.00 1 8 25 3 1018.21796 3052.63932 3.89 51.86 5953 5953 MS2 38/104 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 5.75 0.00 1 33 25 3 1018.21552 3052.63199 1.49 51.83 6197 6197 MS2 37/104 Linfeng_091311_rIgG_4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 277 5.73 0.00 0 1 25 3 958.13940 2872.40366 3.74 47.08 4974 4974 MS2 36/104 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.73 0.00 0 20 9 3 599.67499 1797.01041 -0.73 42.41 4741 4741 MS2 35/60 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.73 0.00 0 2 25 3 599.67712 1797.01682 2.84 42.58 4401 4401 MS2 35/60 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 5.71 0.00 0 9 18 2 1184.13171 2367.25615 -2.79 44.61 5123 5123 MS2 28/40 Linfeng_091311_rIgG_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 282 5.71 0.00 0 16 25 3 789.76178 2367.27079 3.39 45.13 4727 4727 MS2 37/80 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 5.69 0.00 0 20 25 3 694.99408 2082.96769 1.34 35.29 3647 3647 MS2 35/64 Linfeng_122411_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 5.68 0.00 1 2 25 3 1018.21832 3052.64042 4.25 51.72 5556 5556 MS2 35/104 Linfeng_122411_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.66 0.00 1 26 25 3 1018.21613 3052.63382 2.09 52.06 6135 6135 MS2 35/104 Linfeng_091311_rIgG_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 22 5.64 0.00 0 3 13 2 1171.99207 2342.97685 -3.25 36.06 3980 3980 MS2 28/52 Linfeng_091311_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 5.64 0.00 1 11 25 3 1018.21356 3052.62613 -0.43 51.89 6176 6176 MS2 36/104 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 5.63 0.00 1 4 25 3 1018.21936 3052.64353 5.27 50.78 5516 5516 MS2 32/104 Linfeng_122411_rIgG_4.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 292 5.62 0.00 0 20 25 3 916.14667 2746.42545 2.23 53.75 6500 6500 MS2 39/88 Linfeng_091311_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 276 5.61 0.00 0 3 25 3 958.13776 2872.39872 2.02 47.00 4962 4962 MS2 39/104 Linfeng_122411_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 134 5.60 0.00 1 8 25 3 1018.21924 3052.64316 5.15 50.99 5363 5363 MS2 38/104 Linfeng_122411_rIgG_8.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 22 5.58 0.00 0 0 25 2 1171.99231 2342.97734 -3.04 36.01 4267 4267 MS2 28/52 Linfeng_091311_rIgG_2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 5.58 0.00 0 13 25 3 916.14722 2746.42710 2.83 54.05 6420 6420 MS2 41/88 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 5.55 0.00 0 3 14 3 694.99457 2082.96915 2.04 34.96 3439 3439 MS2 35/64 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 5.55 0.00 0 1 20 3 599.67383 1797.00693 -2.67 43.31 4956 4956 MS2 35/60 Linfeng_091311_rIgG_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 5.54 0.00 0 0 25 2 1041.98853 2082.96977 2.34 35.20 3323 3323 MS2 22/32 Linfeng_122411_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 197 5.53 0.00 0 32 100 3 599.67841 1797.02066 4.98 55.15 8153 8153 MS2 33/60 Linfeng_20120125_PCAF_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 5.50 0.00 0 1 25 2 1041.98767 2082.96807 1.52 35.36 3656 3656 MS2 21/32 Linfeng_122411_rIgG_6.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 214 5.50 0.00 0 7 25 2 1184.13232 2367.25737 -2.28 45.18 5338 5338 MS2 26/40 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 5.49 0.00 0 4 10 3 694.99139 2082.95963 -2.53 35.94 4211 4211 MS2 35/64 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 152 5.49 0.00 0 1 20 2 1041.98401 2082.96074 -1.99 35.96 4214 4214 MS2 22/32 Linfeng_091311_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 5.48 0.00 0 6 25 3 789.76105 2367.26859 2.46 43.57 4636 4636 MS2 40/80 Linfeng_122411_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 5.47 0.00 1 24 25 3 1018.21552 3052.63199 1.49 61.08 7081 7081 MS2 31/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 314 5.47 0.00 0 6 15 2 998.99066 1996.97405 1.51 38.16 3819 3819 MS2 23/32 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 5.46 0.00 0 0 8 2 1041.98572 2082.96416 -0.35 35.10 3735 3735 MS2 22/32 Linfeng_122411_rIgG_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.43 0.00 0 2 25 2 1184.13171 2367.25615 -2.79 44.78 5391 5391 MS2 27/40 Linfeng_091311_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 5.43 0.00 0 7 11 3 789.75769 2367.25852 -1.79 44.99 5308 5308 MS2 37/80 Linfeng_091311_rIgG_5.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 289 5.42 0.00 0 32 25 3 916.14691 2746.42618 2.49 54.18 6561 6561 MS2 39/88 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 192 5.42 0.00 0 4 25 3 599.67676 1797.01572 2.23 42.30 4477 4477 MS2 33/60 Linfeng_122411_rIgG_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 5.41 0.00 0 27 25 3 789.75775 2367.25870 -1.72 45.00 5316 5316 MS2 40/80 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.40 0.00 1 24 25 3 1018.21545 3052.63181 1.43 53.02 6310 6310 MS2 33/104 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 144 5.39 0.00 0 1 12 2 1041.98291 2082.95854 -3.05 35.97 4261 4261 MS2 22/32 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 20 5.39 0.00 0 7 25 2 1171.99023 2342.97319 -4.81 36.16 4174 4174 MS2 26/52 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 35 5.37 0.00 0 23 25 3 781.66754 2342.98807 1.54 35.04 3448 3448 MS2 45/104 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 5.36 0.00 0 5 10 2 998.99146 1996.97563 2.31 38.14 3841 3841 MS2 24/32 Linfeng_122411_rIgG_2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 294 5.36 0.00 0 18 25 4 687.36108 2746.42251 1.15 54.19 6562 6562 MS2 52/132 Linfeng_091311_rIgG_8.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 5.35 0.00 0 9 14 3 958.13495 2872.39029 -0.92 47.09 5349 5349 MS2 37/104 Linfeng_122411_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 5.34 0.00 0 5 7 3 781.66864 2342.99137 2.95 35.10 3428 3428 MS2 43/104 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 5.34 0.00 0 9 25 3 599.67456 1797.00913 -1.44 43.58 5170 5170 MS2 34/60 Linfeng_091311_rIgG_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 5.33 0.00 0 1 22 2 1041.98914 2082.97099 2.93 35.12 3430 3430 MS2 22/32 Linfeng_122411_rIgG_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 5.33 0.00 1 100 100 2 1106.55823 2212.10918 5.04 36.74 3893 3893 MS2 22/36 Linfeng_20120125_PCAF_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.33 0.00 0 4 25 3 599.67700 1797.01645 2.63 43.67 4538 4538 MS2 35/60 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 5.32 0.00 0 0 25 2 1171.99329 2342.97930 -2.21 36.14 4228 4228 MS2 25/52 Linfeng_091311_rIgG_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 5.32 0.00 0 43 25 3 694.99506 2082.97062 2.75 35.08 3426 3426 MS2 35/64 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 5.30 0.00 0 4 12 3 694.99457 2082.96915 2.04 35.18 3320 3320 MS2 34/64 Linfeng_122411_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 5.28 0.00 0 2 23 3 599.67340 1797.00565 -3.38 43.43 5221 5221 MS2 35/60 Linfeng_091311_rIgG_2.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 349 5.26 0.00 0 28 25 3 699.35669 2096.05552 4.13 53.12 6111 6111 MS2 34/68 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 146 5.26 0.00 1 13 25 3 1018.21692 3052.63620 2.87 53.77 5799 5799 MS2 37/104 Linfeng_122411_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 5.25 0.00 0 35 25 3 789.75891 2367.26218 -0.25 45.69 5439 5439 MS2 42/80 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 170 5.25 0.00 0 1 25 2 1041.98877 2082.97026 2.58 34.99 3442 3442 MS2 21/32 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 191 5.24 0.00 0 3 10 3 599.67676 1797.01572 2.23 42.58 4390 4390 MS2 34/60 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 5.23 0.00 0 6 25 3 599.67383 1797.00693 -2.67 43.88 5273 5273 MS2 34/60 Linfeng_091311_rIgG_8.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 5.23 0.00 0 9 25 2 1184.13208 2367.25688 -2.48 45.03 5352 5352 MS2 27/40 Linfeng_091311_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 5.23 0.00 0 18 25 3 666.32996 1996.97531 2.15 38.11 3837 3837 MS2 35/64 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 150 5.22 0.00 0 0 25 2 1041.98438 2082.96147 -1.64 35.99 4210 4210 MS2 22/32 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 5.21 0.00 1 3 25 4 763.91516 3052.63881 3.72 50.88 5453 5453 MS2 47/156 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 318 5.21 0.00 0 0 84 2 998.99640 1996.98552 7.26 47.26 7241 7241 MS2 24/32 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.21 0.00 0 16 25 3 599.67712 1797.01682 2.84 42.50 4547 4547 MS2 34/60 Linfeng_122411_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 5.21 0.00 0 0 25 2 1171.99951 2342.99175 3.11 33.11 2807 2807 MS2 25/52 Linfeng_122411_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 5.21 0.00 0 5 25 3 694.99463 2082.96933 2.13 34.97 3556 3556 MS2 34/64 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.20 0.00 0 1 25 3 599.67517 1797.01096 -0.42 43.48 5161 5161 MS2 35/60 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.19 0.00 0 4 6 3 694.99103 2082.95853 -3.06 35.96 4260 4260 MS2 34/64 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 5.16 0.00 0 9 19 3 781.66431 2342.97837 -2.60 36.16 4202 4202 MS2 46/104 Linfeng_091311_rIgG_7.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 5.16 0.00 0 46 25 3 916.14734 2746.42746 2.96 54.18 6361 6361 MS2 39/88 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 145 5.13 0.00 1 5 25 4 763.91431 3052.63540 2.60 50.80 5821 5821 MS2 46/156 Linfeng_122411_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 5.12 0.00 0 13 12 2 998.98602 1996.96477 -3.13 38.71 4343 4343 MS2 22/32 Linfeng_091311_rIgG_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 152 5.12 0.00 0 7 24 3 694.99146 2082.95981 -2.44 35.98 4208 4208 MS2 32/64 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 5.09 0.00 0 27 25 3 781.66779 2342.98880 1.85 35.19 3322 3322 MS2 45/104 Linfeng_122411_rIgG_10.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.08 0.00 0 5 25 2 1184.13306 2367.25884 -1.66 44.80 5327 5327 MS2 26/40 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 5.08 0.00 0 0 100 2 1172.00378 2343.00029 6.75 42.78 6160 6160 MS2 29/52 Linfeng_20120125_PCAF_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 5.06 0.00 0 29 25 3 789.75751 2367.25797 -2.02 45.70 5510 5510 MS2 38/80 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 338 5.06 0.00 0 1 13 2 998.99152 1996.97576 2.37 38.23 3711 3711 MS2 23/32 Linfeng_122411_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 5.06 0.00 0 2 16 2 899.01416 1797.02104 5.19 55.14 8151 8151 MS2 24/30 Linfeng_20120125_PCAF_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 5.04 0.00 1 79 100 3 738.04266 2212.11344 6.97 36.80 4148 4148 MS2 35/72 Linfeng_20120125_PCAF_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.04 0.00 0 5 13 3 694.99103 2082.95853 -3.06 36.22 4221 4221 MS2 34/64 Linfeng_091311_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.04 0.00 0 1 25 2 1041.98389 2082.96050 -2.11 36.20 4206 4206 MS2 22/32 Linfeng_091311_rIgG_7.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 5.03 0.00 0 54 25 3 916.14740 2746.42765 3.03 53.96 6392 6392 MS2 37/88 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 35 5.03 0.00 0 4 19 3 781.66730 2342.98734 1.23 35.33 3652 3652 MS2 46/104 Linfeng_122411_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.02 0.00 1 38 25 4 763.91400 3052.63418 2.20 51.96 6347 6347 MS2 44/156 Linfeng_091311_rIgG_10.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 5.01 0.00 1 4 25 3 738.03882 2212.10190 1.75 31.30 2971 2971 MS2 38/72 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 5.01 0.00 0 7 13 2 1184.13513 2367.26299 0.10 45.04 5315 5315 MS2 27/40 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 5.01 0.00 1 0 25 3 1018.21777 3052.63877 3.71 52.74 5679 5679 MS2 27/104 Linfeng_122411_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.99 0.00 0 0 25 2 1171.99329 2342.97930 -2.21 36.10 4231 4231 MS2 24/52 Linfeng_091311_rIgG_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 4.98 0.00 1 6 25 3 738.03870 2212.10154 1.59 31.32 2943 2943 MS2 39/72 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 4.98 0.00 0 14 25 2 899.01263 1797.01799 3.49 42.63 4408 4408 MS2 23/30 Linfeng_122411_rIgG_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 4.97 0.00 1 81 100 3 738.04285 2212.11399 7.22 37.03 3959 3959 MS2 36/72 Linfeng_20120125_PCAF_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 4.96 0.00 0 9 2 3 694.99121 2082.95908 -2.79 36.00 3971 3971 MS2 34/64 Linfeng_091311_rIgG_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 193 4.96 0.00 0 0 100 2 1041.99365 2082.98003 7.26 42.51 5010 5010 MS2 22/32 Linfeng_20120125_PCAF_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 257 4.94 0.00 0 6 14 2 998.98608 1996.96489 -3.07 38.82 4570 4570 MS2 23/32 Linfeng_091311_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 314 4.94 0.00 0 0 100 2 998.99713 1996.98699 7.99 39.35 4444 4444 MS2 22/32 Linfeng_20120125_PCAF_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 131 4.92 0.00 0 12 25 2 854.39178 1707.77629 2.38 32.66 3318 3318 MS2 24/36 Linfeng_122411_rIgG_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 4.92 0.00 0 20 25 3 958.13495 2872.39029 -0.92 48.30 5766 5766 MS2 34/104 Linfeng_091311_rIgG_4.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 4.92 0.00 0 41 25 3 916.14667 2746.42545 2.23 53.95 6414 6414 MS2 38/88 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 4.92 0.00 0 29 25 3 781.66846 2342.99082 2.71 35.22 3225 3225 MS2 42/104 Linfeng_122411_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 115 4.91 0.00 0 2 15 2 854.38757 1707.76787 -2.55 33.71 3898 3898 MS2 24/36 Linfeng_091311_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 4.90 0.00 0 0 100 2 1172.00330 2342.99932 6.34 43.13 5806 5806 MS2 29/52 Linfeng_20120125_PCAF_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.89 0.00 0 15 25 3 958.13568 2872.39249 -0.15 48.54 5759 5759 MS2 36/104 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 4.89 0.00 0 6 98 3 694.99762 2082.97831 6.44 42.67 6134 6134 MS2 32/64 Linfeng_20120125_PCAF_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.88 0.00 0 9 19 3 781.66406 2342.97763 -2.92 35.97 4215 4215 MS2 43/104 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 4.86 0.00 0 6 23 2 998.98621 1996.96514 -2.95 39.01 4575 4575 MS2 22/32 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 226 4.85 0.00 0 15 25 3 599.67462 1797.00931 -1.34 43.74 5164 5164 MS2 34/60 Linfeng_091311_rIgG_6.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.85 0.00 1 7 2 3 738.03687 2212.09604 -0.89 35.38 3772 3772 MS2 34/72 Linfeng_122411_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 139 4.83 0.00 0 0 23 2 1041.98303 2082.95879 -2.93 36.15 4172 4172 MS2 22/32 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 4.83 0.00 0 3 6 2 998.98499 1996.96269 -4.17 38.70 4618 4618 MS2 23/32 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.83 0.00 1 10 25 4 763.91602 3052.64223 4.84 51.07 5373 5373 MS2 43/156 Linfeng_122411_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 209 4.83 0.00 0 21 57 3 599.67780 1797.01883 3.96 55.15 7274 7274 MS2 32/60 Linfeng_20120125_PCAF_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 139 4.82 0.00 1 6 25 4 763.91498 3052.63808 3.48 51.90 5574 5574 MS2 43/156 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 143 4.81 0.00 0 1 3 2 1041.98315 2082.95903 -2.81 36.01 3973 3973 MS2 22/32 Linfeng_091311_rIgG_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 42 4.81 0.00 0 0 100 2 1172.00488 2343.00249 7.69 42.97 5262 5262 MS2 27/52 Linfeng_20120125_PCAF_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 250 4.81 0.00 0 0 25 2 998.98627 1996.96526 -2.89 35.25 4167 4167 MS2 24/32 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 4.81 0.00 0 13 25 3 599.67419 1797.00803 -2.05 43.78 5163 5163 MS2 35/60 Linfeng_091311_rIgG_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 339 4.81 0.00 1 17 25 3 738.03363 2212.08634 -5.28 32.29 3777 3777 MS2 40/72 Linfeng_091311_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.79 0.00 0 6 25 3 694.99475 2082.96970 2.31 32.88 2778 2778 MS2 34/64 Linfeng_122411_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 4.79 0.00 0 2 25 3 599.67657 1797.01517 1.92 42.73 4333 4333 MS2 36/60 Linfeng_122411_rIgG_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.78 0.00 0 22 8 3 694.99304 2082.96457 -0.15 35.00 3721 3721 MS2 32/64 Linfeng_122411_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 121 4.77 0.00 0 5 25 2 854.38824 1707.76921 -1.77 33.50 3886 3886 MS2 25/36 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.77 0.00 1 2 25 4 763.91534 3052.63955 3.96 50.69 5429 5429 MS2 47/156 Linfeng_122411_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.77 0.00 0 9 25 2 998.98590 1996.96453 -3.25 38.96 4556 4556 MS2 22/32 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 4.77 0.00 0 15 25 2 899.00824 1797.00920 -1.40 43.64 5178 5178 MS2 23/30 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 4.76 0.00 0 0 70 2 1171.99890 2342.99053 2.59 42.28 6288 6288 MS2 26/52 Linfeng_20120125_PCAF_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 4.75 0.00 0 1 25 3 599.67444 1797.00876 -1.65 43.81 5166 5166 MS2 34/60 Linfeng_091311_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 108 4.75 0.00 0 4 6 2 854.38641 1707.76555 -3.91 33.55 3633 3633 MS2 23/36 Linfeng_091311_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.74 0.00 1 0 25 4 763.91541 3052.63979 4.04 53.94 5805 5805 MS2 42/156 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 317 4.74 0.00 0 1 100 2 998.99628 1996.98528 7.14 39.34 4396 4396 MS2 23/32 Linfeng_20120125_PCAF_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 121 4.74 0.00 0 4 25 2 854.38824 1707.76921 -1.77 33.34 3875 3875 MS2 25/36 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 23 4.73 0.00 0 19 13 3 781.66302 2342.97452 -4.24 35.99 4264 4264 MS2 44/104 Linfeng_091311_rIgG_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 4.73 0.00 1 81 100 3 738.04315 2212.11490 7.63 36.70 3845 3845 MS2 35/72 Linfeng_20120125_PCAF_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 4.72 0.00 0 3 11 3 694.99133 2082.95945 -2.62 36.15 4200 4200 MS2 35/64 Linfeng_091311_rIgG_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 4.72 0.00 1 78 100 3 738.04181 2212.11087 5.81 36.92 3934 3934 MS2 33/72 Linfeng_20120125_PCAF_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 120 4.71 0.00 0 3 25 2 854.38733 1707.76738 -2.84 33.72 3889 3889 MS2 25/36 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 195 4.70 0.00 0 7 100 2 1041.99268 2082.97807 6.33 42.41 6284 6284 MS2 22/32 Linfeng_20120125_PCAF_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 177 4.69 0.00 0 0 25 2 1041.98987 2082.97246 3.63 35.12 3574 3574 MS2 21/32 Linfeng_122411_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.69 0.00 0 10 25 3 781.66852 2342.99100 2.79 35.06 3567 3567 MS2 42/104 Linfeng_122411_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 4.69 0.00 1 13 25 3 738.03943 2212.10373 2.58 31.59 3180 3180 MS2 40/72 Linfeng_122411_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.69 0.00 0 0 100 2 1172.00403 2343.00078 6.96 42.96 5764 5764 MS2 27/52 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 4.68 0.00 0 10 25 2 899.01294 1797.01860 3.83 42.42 4492 4492 MS2 22/30 Linfeng_122411_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 122 4.68 0.00 0 7 4 2 854.38885 1707.77043 -1.05 3.84 382 382 MS2 24/36 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 134 4.68 0.00 0 10 25 2 854.39252 1707.77776 3.24 32.40 3229 3229 MS2 24/36 Linfeng_122411_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 112 4.68 0.00 0 6 25 2 854.38770 1707.76811 -2.41 33.41 3927 3927 MS2 24/36 Linfeng_091311_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 116 4.68 0.00 0 9 8 2 854.39142 1707.77556 1.95 32.60 3140 3140 MS2 25/36 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.67 0.00 0 2 5 3 781.66510 2342.98075 -1.59 35.09 3734 3734 MS2 43/104 Linfeng_122411_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 115 4.66 0.00 0 7 25 2 854.38763 1707.76799 -2.48 33.57 4010 4010 MS2 26/36 Linfeng_091311_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 198 4.66 0.00 0 17 25 2 899.01184 1797.01641 2.61 42.61 4394 4394 MS2 23/30 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 152 4.63 0.00 0 1 83 2 854.39417 1707.78105 5.17 40.77 5282 5282 MS2 23/36 Linfeng_20120125_PCAF_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.63 0.00 0 25 25 3 781.66394 2342.97727 -3.07 36.02 4213 4213 MS2 43/104 Linfeng_091311_rIgG_4.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 4.62 0.00 0 4 25 3 916.14783 2746.42893 3.49 52.54 5650 5650 MS2 36/88 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 163 4.62 0.00 0 0 56 2 1041.98633 2082.96538 0.23 43.34 6298 6298 MS2 22/32 Linfeng_20120125_PCAF_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.61 0.00 0 0 100 2 1171.99951 2342.99175 3.11 43.33 5197 5197 MS2 30/52 Linfeng_20120125_PCAF_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 114 4.60 0.00 0 5 7 2 854.39142 1707.77556 1.95 32.37 2958 2958 MS2 24/36 Linfeng_122411_rIgG_10.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 315 4.60 0.00 0 22 59 2 998.99573 1996.98418 6.59 39.02 5440 5440 MS2 24/32 Linfeng_20120125_PCAF_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 4.60 0.00 0 33 25 3 599.67694 1797.01627 2.53 43.63 4526 4526 MS2 33/60 Linfeng_122411_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 281 4.58 0.00 0 16 14 2 998.98810 1996.96892 -1.05 38.09 4148 4148 MS2 23/32 Linfeng_122411_rIgG_5.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 4.57 0.00 1 5 25 3 738.03717 2212.09696 -0.48 31.26 3209 3209 MS2 37/72 Linfeng_122411_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 318 4.57 0.00 0 1 100 2 998.99591 1996.98454 6.77 39.35 4737 4737 MS2 25/32 Linfeng_20120125_PCAF_4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 4.57 0.00 0 2 25 3 958.13867 2872.40146 2.97 48.11 5105 5105 MS2 36/104 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.56 0.00 0 18 75 3 781.66901 2342.99247 3.41 42.33 6300 6300 MS2 40/104 Linfeng_20120125_PCAF_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.56 0.00 0 3 8 3 666.33026 1996.97623 2.61 38.22 3710 3710 MS2 33/64 Linfeng_122411_rIgG_10.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 207 4.56 0.00 0 4 25 2 1373.71741 2746.42754 2.99 52.48 6031 6031 MS2 28/44 Linfeng_122411_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 117 4.55 0.00 0 11 8 2 854.38660 1707.76592 -3.70 33.75 3858 3858 MS2 25/36 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 4.55 0.00 0 77 100 2 1041.98889 2082.97051 2.69 43.84 6420 6420 MS2 23/32 Linfeng_20120125_PCAF_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.55 0.00 0 48 18 3 781.66382 2342.97690 -3.23 36.13 4170 4170 MS2 44/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 4.55 0.00 0 7 18 3 666.32678 1996.96579 -2.62 39.00 4574 4574 MS2 33/64 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 4.54 0.00 0 2 8 2 899.01306 1797.01885 3.96 55.15 7273 7273 MS2 24/30 Linfeng_20120125_PCAF_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 318 4.54 0.00 0 4 25 2 998.99207 1996.97685 2.92 38.27 4019 4019 MS2 23/32 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 204 4.54 0.00 0 37 25 2 899.01202 1797.01677 2.81 44.21 4608 4608 MS2 22/30 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.54 0.00 0 24 25 3 599.67700 1797.01645 2.63 45.82 4814 4814 MS2 33/60 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 152 4.54 0.00 0 2 67 2 854.39587 1707.78447 7.17 39.43 4921 4921 MS2 24/36 Linfeng_20120125_PCAF_6.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 370 4.54 0.00 1 64 100 3 738.04236 2212.11252 6.56 36.84 3917 3917 MS2 34/72 Linfeng_20120125_PCAF_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 4.53 0.00 1 19 100 2 1106.55579 2212.10430 2.84 36.63 4107 4107 MS2 25/36 Linfeng_20120125_PCAF_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 4.53 0.00 1 9 25 4 763.91266 3052.62880 0.44 51.75 6270 6270 MS2 39/156 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 285 4.52 0.00 0 1 30 2 998.99658 1996.98589 7.44 39.25 5333 5333 MS2 23/32 Linfeng_20120125_PCAF_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 4.49 0.00 0 0 25 2 998.98981 1996.97234 0.66 34.53 3239 3239 MS2 20/32 Linfeng_122411_rIgG_10.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 132 4.47 0.00 0 4 25 2 854.39246 1707.77764 3.16 32.43 2874 2874 MS2 25/36 Linfeng_122411_rIgG_9.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 371 4.47 0.00 1 67 100 3 738.04236 2212.11252 6.56 36.84 4755 4755 MS2 38/72 Linfeng_20120125_PCAF_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 132 4.46 0.00 0 11 25 2 854.39215 1707.77703 2.81 32.68 2752 2752 MS2 24/36 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.45 0.00 0 3 25 3 666.33026 1996.97623 2.61 38.25 4016 4016 MS2 37/64 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 4.45 0.00 0 27 25 3 599.67639 1797.01462 1.61 42.59 3994 3994 MS2 32/60 Linfeng_122411_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 193 4.45 0.00 0 4 100 2 1041.99390 2082.98052 7.50 42.62 5191 5191 MS2 24/32 Linfeng_20120125_PCAF_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 4.44 0.00 0 4 100 2 854.39606 1707.78484 7.38 39.54 4689 4689 MS2 23/36 Linfeng_20120125_PCAF_9.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.43 0.00 0 0 25 2 1041.98938 2082.97148 3.16 32.99 2791 2791 MS2 21/32 Linfeng_122411_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 4.42 0.00 0 0 100 2 1041.99438 2082.98149 7.97 42.53 5159 5159 MS2 22/32 Linfeng_20120125_PCAF_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 324 4.41 0.00 0 15 100 2 998.99768 1996.98808 8.54 48.21 7023 7023 MS2 22/32 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 4.39 0.00 0 7 25 3 599.67438 1797.00858 -1.75 44.51 5356 5356 MS2 31/60 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.39 0.00 0 13 25 3 781.66876 2342.99173 3.10 32.60 2741 2741 MS2 40/104 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 123 4.39 0.00 0 12 8 2 854.38989 1707.77251 0.16 32.43 3368 3368 MS2 24/36 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 4.37 0.00 1 16 25 4 763.91327 3052.63125 1.24 52.04 6133 6133 MS2 43/156 Linfeng_091311_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 116 4.37 0.00 0 5 3 2 854.39136 1707.77544 1.88 32.47 3093 3093 MS2 25/36 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 4.37 0.00 0 13 25 3 599.67297 1797.00437 -4.09 44.89 5295 5295 MS2 33/60 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 4.36 0.00 0 14 25 2 899.00732 1797.00737 -2.42 59.23 6987 6987 MS2 22/30 Linfeng_091311_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 192 4.36 0.00 0 9 100 2 1041.99353 2082.97978 7.15 42.32 6051 6051 MS2 21/32 Linfeng_20120125_PCAF_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.36 0.00 1 9 25 4 763.91541 3052.63979 4.04 51.85 5952 5952 MS2 44/156 Linfeng_122411_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 4.35 0.00 0 29 25 3 694.99011 2082.95578 -4.37 36.09 4165 4165 MS2 36/64 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 4.34 0.00 1 9 25 4 763.91516 3052.63881 3.72 51.72 5557 5557 MS2 49/156 Linfeng_122411_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.34 0.00 0 0 100 2 1172.00256 2342.99785 5.71 42.99 5280 5280 MS2 26/52 Linfeng_20120125_PCAF_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 4.34 0.00 0 7 100 2 998.99774 1996.98821 8.61 39.27 4884 4884 MS2 22/32 Linfeng_20120125_PCAF_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 4.34 0.00 0 12 25 3 666.33038 1996.97660 2.79 38.08 3809 3809 MS2 32/64 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 140 4.34 0.00 0 2 25 2 1041.98303 2082.95879 -2.93 36.26 4226 4226 MS2 22/32 Linfeng_091311_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 4.33 0.00 1 15 25 4 763.91394 3052.63393 2.12 51.67 6015 6015 MS2 44/156 Linfeng_091311_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.33 0.00 0 18 25 3 958.13318 2872.38498 -2.76 48.18 5824 5824 MS2 33/104 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 4.33 0.00 0 6 25 3 666.32623 1996.96415 -3.44 38.97 4557 4557 MS2 33/64 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 4.33 0.00 0 5 25 3 599.67413 1797.00785 -2.16 44.58 5295 5295 MS2 34/60 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 4.33 0.00 0 1 12 2 854.39545 1707.78362 6.67 39.00 5272 5272 MS2 23/36 Linfeng_20120125_PCAF_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 4.32 0.00 0 0 100 2 1172.00415 2343.00102 7.07 43.04 5291 5291 MS2 28/52 Linfeng_20120125_PCAF_7.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.32 0.00 1 5 25 4 763.91571 3052.64101 4.44 52.92 5696 5696 MS2 46/156 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 42 4.31 0.00 0 0 100 2 1172.00330 2342.99932 6.34 42.87 5089 5089 MS2 27/52 Linfeng_20120125_PCAF_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 4.30 0.00 0 40 25 3 781.66785 2342.98899 1.93 35.30 3081 3081 MS2 42/104 Linfeng_122411_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 4.30 0.00 0 0 71 2 1041.98901 2082.97075 2.81 42.09 6232 6232 MS2 22/32 Linfeng_20120125_PCAF_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 4.30 0.00 0 0 100 2 1172.00464 2343.00200 7.48 42.97 5579 5579 MS2 26/52 Linfeng_20120125_PCAF_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 153 4.29 0.00 0 5 100 2 854.39636 1707.78545 7.74 39.55 4484 4484 MS2 23/36 Linfeng_20120125_PCAF_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 4.28 0.00 0 9 25 3 666.32690 1996.96616 -2.43 38.77 4570 4570 MS2 34/64 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 4.28 0.00 0 11 15 2 899.01373 1797.02019 4.71 55.16 7265 7265 MS2 23/30 Linfeng_20120125_PCAF_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 4.28 0.00 0 10 25 3 599.67505 1797.01059 -0.63 44.57 5297 5297 MS2 32/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 4.27 0.00 0 16 25 3 599.67560 1797.01224 0.29 45.65 5433 5433 MS2 32/60 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.27 0.00 0 4 100 2 1172.00049 2342.99370 3.94 43.30 5343 5343 MS2 25/52 Linfeng_20120125_PCAF_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.27 0.00 1 19 25 4 763.91278 3052.62929 0.60 51.93 6293 6293 MS2 47/156 Linfeng_091311_rIgG_8.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 4.27 0.00 0 53 100 2 998.99750 1996.98772 8.36 10.94 755 755 MS2 22/32 Linfeng_20120125_PCAF_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 4.26 0.00 1 40 25 3 1018.21350 3052.62595 -0.49 59.29 6914 6914 MS2 27/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 4.26 0.00 0 12 25 3 666.32959 1996.97422 1.60 37.98 3418 3418 MS2 35/64 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 318 4.26 0.00 0 0 100 2 998.99670 1996.98613 7.57 39.32 4640 4640 MS2 25/32 Linfeng_20120125_PCAF_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 4.26 0.00 0 9 25 2 998.99170 1996.97612 2.55 38.09 3949 3949 MS2 22/32 Linfeng_122411_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 4.26 0.00 1 1 100 2 1106.56079 2212.11431 7.36 46.38 7032 7032 MS2 20/36 Linfeng_20120125_PCAF_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 4.25 0.00 0 13 100 2 998.99786 1996.98845 8.73 46.47 6315 6315 MS2 23/32 Linfeng_20120125_PCAF_9.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 4.25 0.00 0 11 25 3 699.35632 2096.05442 3.60 54.44 6461 6461 MS2 29/68 Linfeng_091311_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 151 4.25 0.00 0 2 52 2 854.39569 1707.78411 6.95 39.27 4383 4383 MS2 24/36 Linfeng_20120125_PCAF_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.25 0.00 1 7 25 4 763.91272 3052.62905 0.52 51.92 6180 6180 MS2 48/156 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 4.24 0.00 0 11 100 2 1041.99536 2082.98345 8.91 42.64 5415 5415 MS2 22/32 Linfeng_20120125_PCAF_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 341 4.24 0.00 0 0 100 2 998.99573 1996.98418 6.59 47.40 6146 6146 MS2 23/32 Linfeng_20120125_PCAF_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 4.22 0.00 0 71 25 2 899.01068 1797.01409 1.32 58.17 6896 6896 MS2 22/30 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 4.22 0.00 0 14 25 3 599.67413 1797.00785 -2.16 43.68 5311 5311 MS2 34/60 Linfeng_091311_rIgG_10.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 4.20 0.00 0 69 100 2 998.99573 1996.98418 6.59 46.40 5916 5916 MS2 21/32 Linfeng_20120125_PCAF_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 265 4.19 0.00 0 8 25 2 998.98608 1996.96489 -3.07 38.92 4529 4529 MS2 22/32 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.19 0.00 0 1 25 2 1171.99841 2342.98955 2.17 35.41 3662 3662 MS2 21/52 Linfeng_122411_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.18 0.00 0 9 95 3 781.66882 2342.99192 3.18 43.03 6222 6222 MS2 36/104 Linfeng_20120125_PCAF_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 4.17 0.00 0 17 25 2 998.98639 1996.96550 -2.76 38.73 4565 4565 MS2 22/32 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 4.16 0.00 0 35 100 2 998.99609 1996.98491 6.96 11.10 783 783 MS2 22/32 Linfeng_20120125_PCAF_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 4.16 0.00 0 7 23 3 666.32690 1996.96616 -2.43 38.85 4574 4574 MS2 35/64 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 4.16 0.00 0 0 100 2 1172.00305 2342.99883 6.13 43.19 5820 5820 MS2 27/52 Linfeng_20120125_PCAF_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 117 4.15 0.00 0 7 25 2 854.38794 1707.76860 -2.13 33.80 3892 3892 MS2 23/36 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 4.13 0.00 0 19 25 3 599.67413 1797.00785 -2.16 44.84 5301 5301 MS2 32/60 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 4.13 0.00 0 0 89 2 998.99115 1996.97502 2.00 45.97 7347 7347 MS2 22/32 Linfeng_20120125_PCAF_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 4.12 0.00 0 4 25 4 718.85583 2872.40151 2.99 47.19 4989 4989 MS2 41/156 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.10 0.00 0 18 25 3 781.66376 2342.97672 -3.31 36.27 4227 4227 MS2 42/104 Linfeng_091311_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 4.09 0.00 1 14 25 4 763.91266 3052.62880 0.44 51.83 6189 6189 MS2 41/156 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.09 0.00 0 14 25 3 666.32983 1996.97495 1.97 38.08 3947 3947 MS2 32/64 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 207 4.09 0.00 0 54 25 2 899.00793 1797.00859 -1.74 57.96 6713 6713 MS2 19/30 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 320 4.09 0.00 0 74 11 3 666.32825 1996.97019 -0.42 38.09 4147 4147 MS2 36/64 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 185 4.09 0.00 0 21 76 2 899.01373 1797.02019 4.71 55.14 7770 7770 MS2 24/30 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 4.08 0.00 0 11 25 3 599.67682 1797.01590 2.33 48.15 5110 5110 MS2 29/60 Linfeng_122411_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 132 4.06 0.00 1 0 100 3 1018.21930 3052.64334 5.21 2.30 273 273 MS2 30/104 Linfeng_20120125_PCAF_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 4.06 0.00 0 27 25 3 599.67487 1797.01004 -0.93 58.20 6899 6899 MS2 32/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.04 0.00 0 34 25 3 599.67712 1797.01682 2.84 44.75 4678 4678 MS2 30/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.04 0.00 0 24 25 3 599.67596 1797.01334 0.90 43.44 4875 4875 MS2 34/60 Linfeng_122411_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 4.04 0.00 0 20 25 2 998.98694 1996.96660 -2.21 38.96 4557 4557 MS2 23/32 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 4.04 0.00 0 36 25 2 899.00653 1797.00578 -3.30 59.27 6860 6860 MS2 20/30 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.03 0.00 1 19 25 4 763.91278 3052.62929 0.60 51.85 6200 6200 MS2 42/156 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 150 4.03 0.00 0 22 100 2 854.39618 1707.78508 7.52 38.41 4683 4683 MS2 19/36 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 4.02 0.00 0 5 25 3 599.67432 1797.00840 -1.85 46.46 5494 5494 MS2 34/60 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 4.01 0.00 0 7 25 3 599.67682 1797.01590 2.33 53.36 6339 6339 MS2 26/60 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 4.01 0.00 0 31 100 2 998.99646 1996.98564 7.32 39.24 4876 4876 MS2 23/32 Linfeng_20120125_PCAF_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.01 0.00 0 6 25 2 854.39362 1707.77995 4.52 32.48 2340 2340 MS2 21/36 Linfeng_122411_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.00 0.00 0 5 13 3 569.92969 1707.77451 1.33 32.48 3094 3094 MS2 37/72 Linfeng_122411_rIgG_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 385 4.00 0.00 1 6 29 3 738.04285 2212.11399 7.22 46.57 7076 7076 MS2 29/72 Linfeng_20120125_PCAF_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 4.00 0.00 0 7 100 2 854.39587 1707.78447 7.17 39.52 4774 4774 MS2 23/36 Linfeng_20120125_PCAF_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 3.99 0.00 1 35 25 4 763.91357 3052.63247 1.64 51.94 6155 6155 MS2 44/156 Linfeng_091311_rIgG_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 3.99 0.00 0 3 3 3 666.32672 1996.96561 -2.71 38.76 4350 4350 MS2 34/64 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 153 3.99 0.00 0 9 100 2 854.39655 1707.78581 7.95 39.53 4472 4472 MS2 23/36 Linfeng_20120125_PCAF_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 3.98 0.00 0 5 10 3 666.32611 1996.96378 -3.63 38.72 4620 4620 MS2 35/64 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 3.98 0.00 1 10 38 3 1018.21906 3052.64261 4.97 55.29 7761 7761 MS2 32/104 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.97 0.00 0 65 25 2 899.00940 1797.01152 -0.11 57.98 6756 6756 MS2 20/30 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 212 3.97 0.00 0 10 25 2 899.00830 1797.00932 -1.33 43.60 5177 5177 MS2 24/30 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.96 0.00 0 7 25 3 599.67432 1797.00840 -1.85 43.72 5147 5147 MS2 32/60 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 155 3.96 0.00 0 15 25 3 694.99158 2082.96018 -2.26 36.22 4204 4204 MS2 33/64 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 3.95 0.00 0 24 25 2 899.00793 1797.00859 -1.74 58.97 6789 6789 MS2 20/30 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 3.95 0.00 0 77 100 2 998.99701 1996.98674 7.87 41.89 5949 5949 MS2 20/32 Linfeng_20120125_PCAF_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 3.95 0.00 0 3 100 2 998.99615 1996.98503 7.02 39.07 5434 5434 MS2 22/32 Linfeng_20120125_PCAF_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 3.93 0.00 0 11 18 2 899.00745 1797.00762 -2.28 43.43 4971 4971 MS2 24/30 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 3.91 0.00 0 42 25 3 599.67816 1797.01993 4.57 49.20 5243 5243 MS2 32/60 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 169 3.91 0.00 0 14 100 2 854.39618 1707.78508 7.52 38.24 4187 4187 MS2 18/36 Linfeng_20120125_PCAF_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 3.91 0.00 0 28 25 3 599.67572 1797.01261 0.49 51.26 6127 6127 MS2 29/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.90 0.00 0 38 25 3 599.67419 1797.00803 -2.05 45.49 5482 5482 MS2 30/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.90 0.00 0 23 25 3 599.67584 1797.01297 0.70 57.57 6722 6722 MS2 29/60 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 3.90 0.00 0 6 100 2 854.39337 1707.77947 4.24 38.27 5256 5256 MS2 22/36 Linfeng_20120125_PCAF_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 3.89 0.00 0 22 100 2 998.99518 1996.98308 6.04 46.27 7259 7259 MS2 24/32 Linfeng_20120125_PCAF_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.88 0.00 0 73 25 3 599.67200 1797.00144 -5.72 47.61 5639 5639 MS2 31/60 Linfeng_091311_rIgG_5.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 365 3.88 0.00 1 30 100 3 738.04266 2212.11344 6.97 36.59 4262 4262 MS2 36/72 Linfeng_20120125_PCAF_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 194 3.87 0.00 0 0 100 2 1041.99512 2082.98296 8.67 42.51 5656 5656 MS2 20/32 Linfeng_20120125_PCAF_6.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 274 3.87 0.00 0 44 25 3 789.75848 2367.26090 -0.79 45.99 5473 5473 MS2 32/80 Linfeng_091311_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 377 3.87 0.00 1 77 100 3 738.04260 2212.11325 6.89 36.77 3861 3861 MS2 33/72 Linfeng_20120125_PCAF_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.86 0.00 0 14 25 3 599.67432 1797.00840 -1.85 44.47 5105 5105 MS2 32/60 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 3.86 0.00 0 12 100 2 854.39587 1707.78447 7.17 38.94 4870 4870 MS2 20/36 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 3.86 0.00 0 17 25 3 599.67529 1797.01133 -0.22 58.24 6817 6817 MS2 29/60 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.86 0.00 0 13 25 3 599.67725 1797.01719 3.04 47.16 4985 4985 MS2 24/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.86 0.00 0 33 25 2 899.00684 1797.00640 -2.96 43.48 5226 5226 MS2 24/30 Linfeng_091311_rIgG_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 3.83 0.00 1 26 25 3 738.03528 2212.09128 -3.05 32.36 3474 3474 MS2 38/72 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.82 0.00 0 16 25 3 599.67566 1797.01242 0.39 48.10 5741 5741 MS2 30/60 Linfeng_091311_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 3.79 0.00 0 29 25 3 789.75757 2367.25815 -1.95 46.05 5443 5443 MS2 28/80 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.79 0.00 0 7 25 3 599.67621 1797.01407 1.31 54.23 6543 6543 MS2 29/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 196 3.79 0.00 0 97 72 2 899.01306 1797.01885 3.96 55.15 7717 7717 MS2 21/30 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 3.78 0.00 0 46 25 2 899.00482 1797.00237 -5.21 60.44 7111 7111 MS2 19/30 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.78 0.00 0 52 25 3 599.67566 1797.01242 0.39 50.06 6060 6060 MS2 29/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 3.77 0.00 0 28 100 2 899.01270 1797.01811 3.56 48.73 7155 7155 MS2 22/30 Linfeng_20120125_PCAF_10.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.76 0.00 0 17 25 3 699.35669 2096.05552 4.13 53.24 5731 5731 MS2 27/68 Linfeng_122411_rIgG_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 302 3.75 0.00 1 0 58 2 1106.55835 2212.10942 5.15 47.22 7230 7230 MS2 21/36 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.74 0.00 0 13 25 3 599.67401 1797.00748 -2.36 46.86 5657 5657 MS2 30/60 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 3.73 0.00 1 14 25 4 763.91504 3052.63833 3.56 52.76 5682 5682 MS2 38/156 Linfeng_122411_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 205 3.72 0.00 0 3 11 2 683.32404 1365.64079 1.04 4.52 501 501 MS2 17/20 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.71 0.00 0 9 25 3 599.67596 1797.01334 0.90 56.83 6787 6787 MS2 27/60 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 323 3.71 0.00 0 0 100 2 998.99689 1996.98650 7.75 46.41 6609 6609 MS2 21/32 Linfeng_20120125_PCAF_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 3.71 0.00 0 5 100 3 694.99823 2082.98014 7.32 42.98 5113 5113 MS2 30/64 Linfeng_20120125_PCAF_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 157 3.69 0.00 0 14 100 2 854.39630 1707.78533 7.67 42.17 5600 5600 MS2 21/36 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.68 0.00 0 11 25 3 599.67432 1797.00840 -1.85 45.58 5247 5247 MS2 28/60 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.68 0.00 0 46 25 3 599.67389 1797.00711 -2.56 59.11 6974 6974 MS2 27/60 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 176 3.67 0.00 0 4 15 2 683.32159 1365.63591 -2.53 22.97 2467 2467 MS2 17/20 Linfeng_091311_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.67 0.00 0 7 18 3 455.88498 1365.64038 0.74 4.52 502 502 MS2 24/40 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.67 0.00 0 26 25 3 599.67419 1797.00803 -2.05 46.61 5378 5378 MS2 27/60 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 119 3.67 0.00 0 30 25 2 854.39142 1707.77556 1.95 32.77 3064 3064 MS2 19/36 Linfeng_122411_rIgG_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 3.65 0.00 0 0 100 2 1041.99426 2082.98125 7.85 42.50 5467 5467 MS2 18/32 Linfeng_20120125_PCAF_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.64 0.00 0 13 25 3 599.67554 1797.01206 0.19 46.69 5563 5563 MS2 30/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 167 3.64 0.00 0 32 27 2 899.01355 1797.01982 4.51 55.18 8707 8707 MS2 21/30 Linfeng_20120125_PCAF_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 3.64 0.00 0 24 7 3 781.66412 2342.97782 -2.84 36.03 3976 3976 MS2 38/104 Linfeng_091311_rIgG_1.raw High ELTTEIDNNIEQISSYKSEITELR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 3.63 0.00 1 8 25 3 942.47552 2825.41202 2.42 41.74 4294 4294 MS2 18/92 Linfeng_122411_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 202 3.62 0.00 0 0 25 2 1436.70728 2872.40727 5.00 47.15 4981 4981 MS2 22/52 Linfeng_122411_rIgG_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 70 3.61 0.00 0 0 25 2 775.34119 1549.67510 -1.43 19.21 1946 1946 MS2 23/38 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 3.61 0.00 0 23 25 3 599.67712 1797.01682 2.84 51.22 5495 5495 MS2 27/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 207 3.60 0.00 0 25 25 3 599.67792 1797.01920 4.16 52.12 6064 6064 MS2 24/60 Linfeng_091311_rIgG_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 3.60 0.00 0 70 100 2 998.99634 1996.98540 7.20 1.27 102 102 MS2 19/32 Linfeng_20120125_PCAF_2.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 70 3.59 0.00 0 1 25 2 775.34137 1549.67546 -1.19 19.23 1938 1938 MS2 25/38 Linfeng_091311_rIgG_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 175 3.58 0.00 0 3 25 2 683.32184 1365.63640 -2.18 23.29 2509 2509 MS2 17/20 Linfeng_091311_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 3.58 0.00 0 18 15 3 694.99097 2082.95835 -3.14 36.27 4290 4290 MS2 34/64 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.58 0.00 0 7 25 3 599.67719 1797.01700 2.94 42.67 4162 4162 MS2 29/60 Linfeng_122411_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 129 3.57 0.00 0 22 25 3 569.92981 1707.77488 1.55 32.61 3142 3142 MS2 33/72 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.57 0.00 0 25 25 3 599.67480 1797.00986 -1.04 47.00 5573 5573 MS2 23/60 Linfeng_091311_rIgG_6.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 3.56 0.00 0 3 25 2 775.34119 1549.67510 -1.43 19.28 1983 1983 MS2 24/38 Linfeng_091311_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 157 3.56 0.00 0 7 100 2 854.39624 1707.78520 7.60 41.79 5513 5513 MS2 21/36 Linfeng_20120125_PCAF_10.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 365 3.55 0.00 1 71 100 3 738.04346 2212.11582 8.05 36.74 4296 4296 MS2 33/72 Linfeng_20120125_PCAF_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 3.55 0.00 1 9 25 3 412.23218 1234.68198 2.36 23.82 1986 1986 MS2 21/36 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.54 0.00 0 17 25 3 599.67389 1797.00711 -2.56 44.94 5308 5308 MS2 29/60 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 225 3.53 0.00 0 27 25 3 599.67468 1797.00949 -1.24 48.42 5751 5751 MS2 23/60 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 3.53 0.00 0 26 25 2 998.98730 1996.96733 -1.85 39.06 4657 4657 MS2 22/32 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 3.53 0.00 0 2 10 2 899.01373 1797.02019 4.71 55.16 7016 7016 MS2 22/30 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 448 3.52 0.00 1 3 0 3 412.23099 1234.67841 -0.53 3.65 369 369 MS2 22/36 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 3.52 0.00 0 26 100 2 854.39624 1707.78520 7.60 38.92 4865 4865 MS2 20/36 Linfeng_20120125_PCAF_10.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 3.52 0.00 0 0 25 2 775.34113 1549.67497 -1.50 19.50 1960 1960 MS2 24/38 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 178 3.50 0.00 0 0 100 2 899.01294 1797.01860 3.83 49.10 7235 7235 MS2 18/30 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 3.50 0.00 0 24 25 3 599.67688 1797.01609 2.43 50.22 5370 5370 MS2 28/60 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 3.50 0.00 0 12 100 3 781.67236 2343.00254 7.71 43.05 5598 5598 MS2 38/104 Linfeng_20120125_PCAF_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 170 3.50 0.00 0 18 100 2 854.39612 1707.78496 7.45 38.54 4265 4265 MS2 19/36 Linfeng_20120125_PCAF_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.50 0.00 0 7 15 2 683.32416 1365.64104 1.22 3.11 290 290 MS2 17/20 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 3.49 0.00 0 79 25 3 599.67719 1797.01700 2.94 54.12 6406 6406 MS2 28/60 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 341 3.48 0.00 0 6 100 2 998.99579 1996.98430 6.65 39.59 4446 4446 MS2 22/32 Linfeng_20120125_PCAF_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 11 100 3 666.33362 1996.98630 7.65 46.90 7154 7154 MS2 31/64 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.47 0.00 0 25 25 3 599.67389 1797.00711 -2.56 60.51 6929 6929 MS2 30/60 Linfeng_091311_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 3.46 0.00 0 5 10 3 455.88324 1365.63517 -3.08 22.94 2496 2496 MS2 24/40 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.46 0.00 0 6 25 3 599.67523 1797.01114 -0.32 53.62 6386 6386 MS2 29/60 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 170 3.46 0.00 0 19 100 2 899.01715 1797.02703 8.52 55.83 8324 8324 MS2 19/30 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 3.46 0.00 1 20 25 3 412.22986 1234.67502 -3.27 24.84 2721 2721 MS2 22/36 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 3.46 0.00 0 39 25 3 599.67542 1797.01169 -0.02 57.84 6868 6868 MS2 27/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.46 0.00 0 11 25 3 599.67413 1797.00785 -2.16 44.92 5405 5405 MS2 31/60 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 406 3.46 0.00 1 3 6 3 412.22964 1234.67438 -3.79 24.48 2415 2415 MS2 22/36 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 406 3.45 0.00 1 6 6 3 412.22971 1234.67456 -3.64 24.51 2719 2719 MS2 22/36 Linfeng_091311_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 130 3.45 0.00 0 37 25 3 569.93011 1707.77579 2.08 32.44 3233 3233 MS2 30/72 Linfeng_122411_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 3.45 0.00 0 0 100 2 998.99670 1996.98613 7.57 46.51 6438 6438 MS2 24/32 Linfeng_20120125_PCAF_4.raw High SQYEQLAEQNRKDAEAWFNEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.44 0.00 2 1 25 3 862.07483 2584.20993 1.38 33.67 3275 3275 MS2 31/80 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.44 0.00 0 65 25 3 599.67377 1797.00675 -2.77 59.80 6907 6907 MS2 28/60 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 163 3.42 0.00 0 19 100 2 854.39673 1707.78618 8.17 39.77 5055 5055 MS2 19/36 Linfeng_20120125_PCAF_10.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 3.42 0.00 0 4 25 2 683.32074 1365.63420 -3.78 22.85 2484 2484 MS2 16/20 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 381 3.42 0.00 1 15 84 3 412.23416 1234.68793 7.18 24.96 2003 2003 MS2 20/36 Linfeng_20120125_PCAF_8.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 187 3.42 0.00 0 5 25 3 455.88342 1365.63572 -2.68 22.99 2471 2471 MS2 24/40 Linfeng_091311_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 161 3.42 0.00 0 43 100 2 854.39636 1707.78545 7.74 38.52 4251 4251 MS2 21/36 Linfeng_20120125_PCAF_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 45 3.42 0.00 0 16 100 3 781.67145 2342.99979 6.54 42.88 5090 5090 MS2 35/104 Linfeng_20120125_PCAF_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.41 0.00 0 12 25 3 455.88351 1365.63599 -2.48 23.31 2511 2511 MS2 23/40 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 3.41 0.00 1 14 80 3 412.23434 1234.68848 7.63 24.89 1987 1987 MS2 20/36 Linfeng_20120125_PCAF_8.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 205 3.40 0.00 0 4 6 2 683.32404 1365.64079 1.04 3.11 306 306 MS2 16/20 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 3.39 0.00 0 14 25 3 599.67456 1797.00913 -1.44 49.54 5922 5922 MS2 28/60 Linfeng_091311_rIgG_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 3.39 0.00 0 4 25 2 695.84546 1390.68364 1.95 28.40 2560 2560 MS2 22/24 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 143 3.39 0.00 0 4 100 2 854.39581 1707.78435 7.10 40.46 5163 5163 MS2 21/36 Linfeng_20120125_PCAF_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 3.38 0.00 0 2 25 2 695.84241 1390.67754 -2.44 29.81 3408 3408 MS2 22/24 Linfeng_091311_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 421 3.38 0.00 1 11 17 3 412.22992 1234.67521 -3.12 24.53 2687 2687 MS2 20/36 Linfeng_091311_rIgG_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.38 0.00 0 3 25 2 775.33997 1549.67266 -3.00 2.01 259 259 MS2 24/38 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 151 3.38 0.00 0 8 100 2 854.39545 1707.78362 6.67 39.93 4866 4866 MS2 21/36 Linfeng_20120125_PCAF_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 325 3.38 0.00 0 12 6 2 695.84387 1390.68047 -0.33 27.79 2728 2728 MS2 22/24 Linfeng_122411_rIgG_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 3.37 0.00 0 8 25 3 789.76111 2367.26877 2.54 44.00 4174 4174 MS2 23/80 Linfeng_122411_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 319 3.37 0.00 0 6 25 2 695.84607 1390.68486 2.83 29.09 2305 2305 MS2 19/24 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 165 3.36 0.00 0 26 100 2 854.39618 1707.78508 7.52 38.99 4881 4881 MS2 20/36 Linfeng_20120125_PCAF_10.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 193 3.36 0.00 0 3 14 3 455.88287 1365.63407 -3.88 22.68 2167 2167 MS2 25/40 Linfeng_091311_rIgG_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.36 0.00 0 7 5 2 683.32062 1365.63396 -3.96 22.67 2165 2165 MS2 17/20 Linfeng_091311_rIgG_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 3.36 0.00 1 0 70 2 1106.55188 2212.09648 -0.70 45.34 7169 7169 MS2 19/36 Linfeng_20120125_PCAF_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 143 3.35 0.00 1 24 25 4 763.91467 3052.63686 3.08 53.78 5800 5800 MS2 37/156 Linfeng_122411_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 42 3.35 0.00 0 0 100 2 1172.00488 2343.00249 7.69 42.99 5770 5770 MS2 28/52 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.35 0.00 0 19 25 3 599.67480 1797.00986 -1.04 58.22 6732 6732 MS2 27/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.34 0.00 0 68 25 3 599.67377 1797.00675 -2.77 47.59 5639 5639 MS2 27/60 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 3.34 0.00 0 35 25 3 694.99506 2082.97062 2.75 35.15 3217 3217 MS2 31/64 Linfeng_122411_rIgG_9.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.34 0.00 0 23 25 3 455.88361 1365.63626 -2.27 23.04 2471 2471 MS2 23/40 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 134 3.34 0.00 1 11 100 3 1018.22034 3052.64646 6.23 55.51 7821 7821 MS2 28/104 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.34 0.00 0 27 25 3 599.67389 1797.00711 -2.56 45.64 5430 5430 MS2 29/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 451 3.33 0.00 1 3 2 3 412.23126 1234.67923 0.14 3.39 333 333 MS2 20/36 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 3.33 0.00 0 16 25 3 455.88333 1365.63544 -2.88 23.27 2480 2480 MS2 23/40 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 414 3.33 0.00 1 41 25 3 412.22980 1234.67484 -3.42 24.84 2696 2696 MS2 22/36 Linfeng_091311_rIgG_7.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 3.33 0.00 0 9 13 2 691.32623 1381.64519 -2.19 3.32 313 313 MS2 18/22 Linfeng_122411_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 3.32 0.00 0 13 25 2 695.84247 1390.67766 -2.35 29.97 3157 3157 MS2 21/24 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 3.31 0.00 1 15 100 3 412.23468 1234.68949 8.44 23.77 1760 1760 MS2 21/36 Linfeng_20120125_PCAF_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 3.30 0.00 1 4 13 3 412.22986 1234.67502 -3.27 24.55 2682 2682 MS2 22/36 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 3.30 0.00 0 27 25 3 599.67413 1797.00785 -2.16 45.98 5445 5445 MS2 24/60 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 3.30 0.00 1 8 42 3 412.23419 1234.68802 7.26 25.18 1709 1709 MS2 20/36 Linfeng_20120125_PCAF_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.29 0.00 0 21 25 3 599.67389 1797.00711 -2.56 60.12 7073 7073 MS2 24/60 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 447 3.29 0.00 1 3 1 3 412.23099 1234.67841 -0.53 3.84 420 420 MS2 21/36 Linfeng_122411_rIgG_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.29 0.00 0 2 25 2 683.32068 1365.63408 -3.87 23.15 2440 2440 MS2 17/20 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.28 0.00 0 35 25 3 599.67487 1797.01004 -0.93 58.08 6627 6627 MS2 28/60 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 425 3.28 0.00 1 8 25 3 412.22995 1234.67530 -3.05 24.73 2798 2798 MS2 22/36 Linfeng_091311_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 321 3.27 0.00 0 7 25 2 695.84381 1390.68035 -0.42 28.88 2880 2880 MS2 22/24 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 3.27 0.00 0 0 25 3 599.67426 1797.00821 -1.95 60.90 7008 7008 MS2 26/60 Linfeng_091311_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 3.27 0.00 0 3 7 2 691.32635 1381.64543 -2.02 3.91 414 414 MS2 18/22 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.27 0.00 0 52 25 3 599.67401 1797.00748 -2.36 59.48 6833 6833 MS2 27/60 Linfeng_091311_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 3.27 0.00 1 16 100 3 412.23428 1234.68830 7.48 23.10 1619 1619 MS2 19/36 Linfeng_20120125_PCAF_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.26 0.00 0 8 25 2 695.84570 1390.68413 2.30 28.44 2709 2709 MS2 22/24 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 3.26 0.00 1 6 25 3 412.22971 1234.67456 -3.64 24.77 2686 2686 MS2 21/36 Linfeng_091311_rIgG_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 326 3.25 0.00 0 14 25 2 695.84192 1390.67656 -3.14 30.22 3490 3490 MS2 22/24 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 3.24 0.00 1 16 100 3 412.23471 1234.68958 8.52 23.73 1753 1753 MS2 21/36 Linfeng_20120125_PCAF_8.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 151 3.24 0.00 0 17 100 2 854.39514 1707.78301 6.31 40.03 5511 5511 MS2 20/36 Linfeng_20120125_PCAF_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 137 3.23 0.00 0 20 25 3 569.92957 1707.77414 1.12 32.37 2959 2959 MS2 34/72 Linfeng_122411_rIgG_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 343 3.23 0.00 1 4 13 3 412.23447 1234.68885 7.93 24.55 1852 1852 MS2 22/36 Linfeng_20120125_PCAF_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 209 3.23 0.00 0 5 100 2 1041.99463 2082.98198 8.20 43.71 5949 5949 MS2 20/32 Linfeng_20120125_PCAF_10.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 182 3.22 0.00 0 29 25 3 694.99561 2082.97226 3.54 35.10 2571 2571 MS2 27/64 Linfeng_122411_rIgG_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 3.22 0.00 0 15 100 2 683.32788 1365.64849 6.67 20.84 1472 1472 MS2 16/20 Linfeng_20120125_PCAF_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 370 3.22 0.00 0 12 100 2 695.84863 1390.68999 6.51 31.61 3484 3484 MS2 20/24 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 230 3.22 0.00 0 5 25 3 599.67474 1797.00968 -1.14 46.91 5588 5588 MS2 31/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 407 3.21 0.00 1 5 22 3 412.22977 1234.67475 -3.49 24.84 2758 2758 MS2 21/36 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 3.21 0.00 0 0 25 3 599.67633 1797.01444 1.51 52.60 6278 6278 MS2 21/60 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 3.20 0.00 0 51 100 2 854.39709 1707.78691 8.60 38.37 5265 5265 MS2 20/36 Linfeng_20120125_PCAF_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 237 3.20 0.00 0 55 25 3 599.67352 1797.00602 -3.18 59.13 6703 6703 MS2 25/60 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.20 0.00 0 45 25 3 599.67566 1797.01242 0.39 51.11 6081 6081 MS2 26/60 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 377 3.20 0.00 1 19 100 3 412.23413 1234.68784 7.11 25.05 2022 2022 MS2 22/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 3.20 0.00 1 14 100 3 412.23419 1234.68802 7.26 25.21 2093 2093 MS2 20/36 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 3.19 0.00 1 16 100 3 412.23376 1234.68674 6.22 25.18 2038 2038 MS2 20/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 3.19 0.00 1 15 100 3 412.23404 1234.68756 6.89 23.65 1780 1780 MS2 21/36 Linfeng_20120125_PCAF_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 3.19 0.00 1 26 100 3 478.93137 1434.77954 6.65 34.54 3379 3379 MS2 22/40 Linfeng_20120125_PCAF_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 3.19 0.00 0 24 25 3 599.67590 1797.01316 0.80 52.95 6227 6227 MS2 22/60 Linfeng_091311_rIgG_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 3.19 0.00 0 5 25 2 683.32196 1365.63664 -2.00 22.98 2463 2463 MS2 16/20 Linfeng_091311_rIgG_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 3.19 0.00 0 8 25 2 695.84137 1390.67546 -3.93 30.13 3552 3552 MS2 21/24 Linfeng_091311_rIgG_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 3.19 0.00 0 33 100 3 781.67261 2343.00327 8.03 43.10 5292 5292 MS2 31/104 Linfeng_20120125_PCAF_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 163 3.18 0.00 0 1 37 2 899.01349 1797.01970 4.44 55.18 7559 7559 MS2 22/30 Linfeng_20120125_PCAF_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 3.18 0.00 0 33 100 2 854.39581 1707.78435 7.10 39.49 5536 5536 MS2 24/36 Linfeng_20120125_PCAF_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 431 3.18 0.00 1 12 13 2 617.84326 1234.67925 0.15 3.40 335 335 MS2 17/18 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.18 0.00 0 21 25 2 683.32141 1365.63555 -2.80 23.18 2531 2531 MS2 17/20 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 3.18 0.00 0 18 25 3 599.67493 1797.01023 -0.83 59.25 6910 6910 MS2 27/60 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 3.18 0.00 1 13 75 3 412.23410 1234.68775 7.04 25.32 1731 1731 MS2 22/36 Linfeng_20120125_PCAF_9.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 316 3.17 0.00 1 0 100 2 1106.55811 2212.10893 4.93 46.62 6658 6658 MS2 18/36 Linfeng_20120125_PCAF_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 176 3.16 0.00 0 6 25 2 683.32159 1365.63591 -2.53 23.24 2476 2476 MS2 17/20 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 229 3.16 0.00 0 0 25 3 599.67474 1797.00968 -1.14 49.03 5930 5930 MS2 24/60 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 3.16 0.00 1 7 37 3 412.23431 1234.68839 7.55 25.56 2060 2060 MS2 22/36 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.16 0.00 0 32 25 3 599.67560 1797.01224 0.29 50.25 6011 6011 MS2 24/60 Linfeng_091311_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 3.15 0.00 0 4 25 2 695.84564 1390.68401 2.21 28.97 2837 2837 MS2 22/24 Linfeng_122411_rIgG_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 173 3.15 0.00 0 10 25 2 683.32178 1365.63628 -2.27 23.21 2468 2468 MS2 16/20 Linfeng_091311_rIgG_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 3.15 0.00 1 15 91 3 412.23431 1234.68839 7.55 25.14 1812 1812 MS2 19/36 Linfeng_20120125_PCAF_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 3.15 0.00 0 56 100 2 854.39441 1707.78154 5.45 37.97 5028 5028 MS2 17/36 Linfeng_20120125_PCAF_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 3.15 0.00 0 29 25 2 695.84259 1390.67790 -2.18 30.16 3420 3420 MS2 20/24 Linfeng_091311_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 3.15 0.00 0 3 100 2 695.84705 1390.68682 4.23 32.68 3356 3356 MS2 21/24 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 237 3.14 0.00 0 81 25 3 599.67242 1797.00272 -5.01 60.58 6821 6821 MS2 23/60 Linfeng_091311_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.14 0.00 0 7 25 2 695.84583 1390.68437 2.48 28.33 2581 2581 MS2 22/24 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 3.14 0.00 0 4 16 2 695.84277 1390.67827 -1.91 29.92 3416 3416 MS2 22/24 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 153 3.13 0.00 0 0 100 2 854.39606 1707.78484 7.38 40.51 5177 5177 MS2 22/36 Linfeng_20120125_PCAF_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 358 3.13 0.00 1 49 100 3 478.93124 1434.77918 6.40 36.57 4691 4691 MS2 20/40 Linfeng_20120125_PCAF_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 3.13 0.00 0 8 100 2 683.32813 1365.64897 7.03 18.93 1409 1409 MS2 17/20 Linfeng_20120125_PCAF_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.13 0.00 0 20 25 3 599.67749 1797.01792 3.45 55.38 5961 5961 MS2 24/60 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 3.13 0.00 0 8 25 3 464.23264 1390.68335 1.74 28.42 2563 2563 MS2 21/48 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 3.13 0.00 1 13 100 3 412.23425 1234.68821 7.41 23.87 1776 1776 MS2 19/36 Linfeng_20120125_PCAF_8.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 3.12 0.00 0 4 14 2 695.84210 1390.67693 -2.88 29.87 3455 3455 MS2 22/24 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.11 0.00 0 19 25 3 599.67438 1797.00858 -1.75 45.04 5320 5320 MS2 26/60 Linfeng_091311_rIgG_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 381 3.11 0.00 1 18 49 3 412.23459 1234.68921 8.22 23.53 1683 1683 MS2 19/36 Linfeng_20120125_PCAF_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 3.10 0.00 0 1 1 2 691.32599 1381.64470 -2.55 4.31 496 496 MS2 18/22 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.10 0.00 0 21 25 3 599.67444 1797.00876 -1.65 48.03 5806 5806 MS2 26/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.10 0.00 0 40 25 3 599.67267 1797.00345 -4.60 60.46 7029 7029 MS2 25/60 Linfeng_091311_rIgG_5.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 193 3.10 0.00 0 25 25 3 455.88275 1365.63370 -4.15 23.21 2448 2448 MS2 23/40 Linfeng_091311_rIgG_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 3.09 0.00 0 5 13 2 691.32605 1381.64482 -2.46 3.30 296 296 MS2 18/22 Linfeng_122411_rIgG_9.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 208 3.09 0.00 0 14 100 2 683.32721 1365.64714 5.69 18.97 1227 1227 MS2 16/20 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 377 3.08 0.00 1 18 100 3 412.23413 1234.68784 7.11 23.98 1728 1728 MS2 21/36 Linfeng_20120125_PCAF_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 3.08 0.00 0 25 25 2 695.84448 1390.68169 0.54 25.69 2066 2066 MS2 22/24 Linfeng_122411_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 3.08 0.00 0 9 25 2 695.84338 1390.67949 -1.04 29.02 2509 2509 MS2 21/24 Linfeng_122411_rIgG_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 346 3.08 0.00 1 16 100 3 412.23447 1234.68885 7.93 25.37 2062 2062 MS2 20/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 3.07 0.00 1 18 98 3 412.23395 1234.68729 6.66 25.15 2035 2035 MS2 22/36 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 307 3.07 0.00 0 16 25 2 695.84241 1390.67754 -2.44 30.05 3369 3369 MS2 21/24 Linfeng_091311_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.07 0.00 1 0 25 2 717.89130 1434.77532 3.70 20.84 1638 1638 MS2 16/20 Linfeng_122411_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 3.06 0.00 0 18 100 2 683.32770 1365.64812 6.41 20.68 1372 1372 MS2 16/20 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.06 0.00 0 17 25 3 599.67535 1797.01151 -0.12 52.12 6319 6319 MS2 28/60 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 277 3.06 0.00 0 2 25 2 695.84253 1390.67778 -2.26 30.15 3435 3435 MS2 22/24 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYKSEITELRR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 305 3.06 0.00 2 2 25 5 597.10828 2981.51228 2.00 39.49 4010 4010 MS2 50/192 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 446 3.05 0.00 1 3 1 3 412.23111 1234.67878 -0.23 3.38 352 352 MS2 19/36 Linfeng_122411_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 381 3.05 0.00 1 14 100 3 412.23419 1234.68802 7.26 25.45 1756 1756 MS2 19/36 Linfeng_20120125_PCAF_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 3.05 0.00 1 32 100 3 412.23383 1234.68692 6.37 27.99 2471 2471 MS2 19/36 Linfeng_20120125_PCAF_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 3.05 0.00 0 25 100 2 1041.99377 2082.98027 7.38 44.54 6146 6146 MS2 18/32 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 3.04 0.00 0 3 100 2 695.84894 1390.69060 6.95 32.10 3277 3277 MS2 22/24 Linfeng_20120125_PCAF_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 43 3.04 0.00 0 0 25 3 781.66968 2342.99448 4.27 35.09 2569 2569 MS2 30/104 Linfeng_122411_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 372 3.04 0.00 1 18 100 3 412.23428 1234.68830 7.48 22.80 1571 1571 MS2 20/36 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 3.03 0.00 0 81 25 3 599.67682 1797.01590 2.33 42.65 4278 4278 MS2 21/60 Linfeng_122411_rIgG_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 172 3.02 0.00 0 13 25 2 691.32391 1381.64055 -5.55 25.79 2897 2897 MS2 18/22 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.02 0.00 0 48 25 3 599.67755 1797.01810 3.55 52.95 5700 5700 MS2 24/60 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 385 3.02 0.00 1 12 72 3 412.23392 1234.68720 6.59 23.65 1841 1841 MS2 19/36 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 3.02 0.00 1 15 77 3 412.23392 1234.68720 6.59 23.62 1837 1837 MS2 20/36 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 3.02 0.00 1 17 87 3 412.23438 1234.68857 7.70 23.16 1627 1627 MS2 19/36 Linfeng_20120125_PCAF_1.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 310 3.01 0.00 1 0 100 2 747.37579 1493.74431 6.67 18.43 1175 1175 MS2 14/22 Linfeng_20120125_PCAF_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 387 3.01 0.00 0 11 100 2 695.84680 1390.68633 3.88 32.92 3259 3259 MS2 19/24 Linfeng_20120125_PCAF_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 3.00 0.00 0 5 100 2 695.84680 1390.68633 3.88 32.78 2997 2997 MS2 20/24 Linfeng_20120125_PCAF_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 3.00 0.00 0 4 1 2 631.80219 1262.59709 -0.09 3.49 343 343 MS2 21/26 Linfeng_122411_rIgG_3.raw Medium TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 3.00 0.00 1 15 25 4 763.91553 3052.64028 4.20 50.75 5512 5512 MS2 32/156 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 3.00 0.00 1 16 100 3 412.23434 1234.68848 7.63 22.84 1579 1579 MS2 20/36 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 2.99 0.00 1 6 25 3 412.23169 1234.68052 1.18 22.18 1931 1931 MS2 19/36 Linfeng_122411_rIgG_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 2.99 0.00 0 21 3 2 631.80231 1262.59734 0.10 3.66 392 392 MS2 21/26 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 2.99 0.00 1 24 25 3 412.23163 1234.68033 1.03 23.56 2155 2155 MS2 19/36 Linfeng_122411_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.98 0.00 0 34 100 2 998.99536 1996.98345 6.22 47.51 6672 6672 MS2 20/32 Linfeng_20120125_PCAF_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 157 2.98 0.00 0 2 0 2 691.32587 1381.64446 -2.72 4.04 433 433 MS2 18/22 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 2.97 0.00 1 6 32 3 412.23425 1234.68821 7.41 24.66 1989 1989 MS2 20/36 Linfeng_20120125_PCAF_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.97 0.00 0 21 25 3 599.67548 1797.01187 0.09 51.08 6187 6187 MS2 26/60 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 371 2.96 0.00 1 6 26 3 412.23438 1234.68857 7.70 24.65 1896 1896 MS2 20/36 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 2.96 0.00 0 87 25 3 599.67651 1797.01499 1.82 58.50 6279 6279 MS2 21/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.96 0.00 0 20 25 3 599.67578 1797.01279 0.59 49.24 5884 5884 MS2 26/60 Linfeng_091311_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 303 2.96 0.00 0 5 25 2 695.84247 1390.67766 -2.35 30.15 3418 3418 MS2 22/24 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.96 0.00 0 64 25 3 599.67621 1797.01407 1.31 53.17 6435 6435 MS2 30/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.95 0.00 0 80 25 3 599.67566 1797.01242 0.39 51.70 6120 6120 MS2 26/60 Linfeng_091311_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 2.95 0.00 0 13 25 3 694.99121 2082.95908 -2.79 36.20 4356 4356 MS2 26/64 Linfeng_091311_rIgG_10.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 2.95 0.00 0 5 25 3 455.88330 1365.63535 -2.95 23.26 2542 2542 MS2 24/40 Linfeng_091311_rIgG_8.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 347 2.95 0.00 0 47 100 2 695.84888 1390.69048 6.86 32.80 3445 3445 MS2 20/24 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 2.95 0.00 0 17 100 2 695.84985 1390.69243 8.27 31.91 2973 2973 MS2 18/24 Linfeng_20120125_PCAF_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 2.95 0.00 1 11 90 3 412.23459 1234.68921 8.22 25.07 1703 1703 MS2 20/36 Linfeng_20120125_PCAF_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 228 2.95 0.00 0 50 25 3 599.67450 1797.00895 -1.54 49.39 5734 5734 MS2 25/60 Linfeng_091311_rIgG_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.94 0.00 0 11 100 2 695.84711 1390.68694 4.32 32.78 3222 3222 MS2 20/24 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 2.94 0.00 1 66 100 3 412.23389 1234.68711 6.52 27.52 2512 2512 MS2 19/36 Linfeng_20120125_PCAF_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.93 0.00 0 10 100 2 683.32770 1365.64812 6.41 20.55 1548 1548 MS2 17/20 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 2.93 0.00 1 14 81 3 412.23380 1234.68683 6.29 25.43 1845 1845 MS2 20/36 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 2.93 0.00 1 16 85 3 412.23392 1234.68720 6.59 25.11 1807 1807 MS2 20/36 Linfeng_20120125_PCAF_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 366 2.93 0.00 1 23 25 3 738.03876 2212.10172 1.67 31.37 3095 3095 MS2 26/72 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.92 0.00 0 10 25 3 599.67487 1797.01004 -0.93 58.32 6648 6648 MS2 22/60 Linfeng_091311_rIgG_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 2.92 0.00 0 17 25 3 455.88287 1365.63407 -3.88 23.10 2570 2570 MS2 19/40 Linfeng_091311_rIgG_10.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 151 2.92 0.00 0 0 100 2 854.39417 1707.78105 5.17 40.35 4588 4588 MS2 18/36 Linfeng_20120125_PCAF_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.92 0.00 0 27 25 3 599.67621 1797.01407 1.31 53.01 6308 6308 MS2 22/60 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.92 0.00 1 25 100 3 412.23419 1234.68802 7.26 24.17 1595 1595 MS2 20/36 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.91 0.00 1 13 72 3 412.23401 1234.68747 6.81 25.21 1819 1819 MS2 19/36 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 2.91 0.00 1 7 45 3 412.23416 1234.68793 7.18 25.67 2060 2060 MS2 19/36 Linfeng_20120125_PCAF_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.91 0.00 0 33 25 3 599.67450 1797.00895 -1.54 58.62 6805 6805 MS2 25/60 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 324 2.91 0.00 1 2 20 2 717.89313 1434.77898 6.26 34.69 4237 4237 MS2 17/20 Linfeng_20120125_PCAF_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 433 2.90 0.00 1 1 25 2 717.88934 1434.77141 0.98 4.56 512 512 MS2 17/20 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 391 2.90 0.00 0 19 25 3 464.23270 1390.68354 1.87 28.33 2582 2582 MS2 21/48 Linfeng_122411_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 2.90 0.00 0 0 10 2 691.32611 1381.64495 -2.37 3.56 336 336 MS2 18/22 Linfeng_122411_rIgG_8.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 347 2.90 0.00 0 3 100 2 998.99554 1996.98381 6.41 46.53 6145 6145 MS2 23/32 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 2.90 0.00 1 11 75 3 412.23395 1234.68729 6.66 25.17 1815 1815 MS2 20/36 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 385 2.89 0.00 1 20 100 3 412.23361 1234.68628 5.85 24.08 1675 1675 MS2 20/36 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 419 2.89 0.00 1 5 25 3 412.23007 1234.67566 -2.75 24.80 2661 2661 MS2 19/36 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 323 2.88 0.00 0 0 100 2 998.99750 1996.98772 8.36 46.49 6119 6119 MS2 19/32 Linfeng_20120125_PCAF_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 2.88 0.00 0 35 25 3 599.67487 1797.01004 -0.93 53.15 6234 6234 MS2 23/60 Linfeng_091311_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 2.88 0.00 0 29 100 2 854.39624 1707.78520 7.60 40.30 4952 4952 MS2 17/36 Linfeng_20120125_PCAF_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 2.88 0.00 0 18 25 3 599.67682 1797.01590 2.33 57.20 6655 6655 MS2 27/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 2.88 0.00 0 78 25 3 599.67383 1797.00693 -2.67 59.17 7099 7099 MS2 21/60 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.87 0.00 0 21 25 3 599.67487 1797.01004 -0.93 50.68 6019 6019 MS2 26/60 Linfeng_091311_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 367 2.87 0.00 1 11 25 2 717.89026 1434.77324 2.26 26.83 2553 2553 MS2 17/20 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 2.87 0.00 0 45 25 3 599.67749 1797.01792 3.45 54.24 5839 5839 MS2 23/60 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 359 2.87 0.00 0 5 100 2 695.84851 1390.68974 6.34 32.66 3108 3108 MS2 20/24 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 381 2.87 0.00 1 18 100 3 412.23416 1234.68793 7.18 24.96 2013 2013 MS2 20/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 381 2.87 0.00 1 9 50 3 412.23425 1234.68821 7.41 25.10 1786 1786 MS2 19/36 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.86 0.00 1 25 25 3 412.23221 1234.68207 2.44 23.88 1927 1927 MS2 18/36 Linfeng_122411_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 2.86 0.00 1 14 100 3 412.23383 1234.68692 6.37 25.12 2030 2030 MS2 22/36 Linfeng_20120125_PCAF_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.86 0.00 1 4 7 2 717.88702 1434.76677 -2.25 27.83 2866 2866 MS2 17/20 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.86 0.00 1 17 100 3 412.23438 1234.68857 7.70 25.46 2076 2076 MS2 20/36 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.86 0.00 0 19 25 3 599.67560 1797.01224 0.29 49.95 5928 5928 MS2 20/60 Linfeng_091311_rIgG_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 317 2.86 0.00 1 2 92 2 717.89392 1434.78057 7.36 35.08 3500 3500 MS2 17/20 Linfeng_20120125_PCAF_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 393 2.86 0.00 1 5 8 3 478.92923 1434.77314 2.18 26.82 2551 2551 MS2 25/40 Linfeng_122411_rIgG_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 187 2.86 0.00 0 19 25 2 683.32202 1365.63677 -1.91 23.02 2558 2558 MS2 16/20 Linfeng_091311_rIgG_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 168 2.86 0.00 0 20 25 2 691.32434 1381.64141 -4.93 26.07 2860 2860 MS2 17/22 Linfeng_091311_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 2.85 0.00 0 0 35 2 695.84387 1390.68047 -0.33 31.85 3634 3634 MS2 21/24 Linfeng_20120125_PCAF_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 2.85 0.00 0 10 100 3 666.33307 1996.98465 6.83 46.83 7139 7139 MS2 29/64 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 385 2.85 0.00 1 24 100 3 412.23389 1234.68711 6.52 23.00 1773 1773 MS2 20/36 Linfeng_20120125_PCAF_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.85 0.00 0 4 12 2 631.80005 1262.59282 -3.48 22.32 2408 2408 MS2 21/26 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 2.84 0.00 0 34 25 3 599.67407 1797.00766 -2.26 59.14 6695 6695 MS2 23/60 Linfeng_091311_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 340 2.84 0.00 0 12 33 2 695.84790 1390.68852 5.46 32.64 3736 3736 MS2 21/24 Linfeng_20120125_PCAF_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 2.83 0.00 1 17 100 2 619.29987 1237.59245 6.15 26.44 2026 2026 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 383 2.82 0.00 1 19 100 3 412.23380 1234.68683 6.29 25.97 2101 2101 MS2 19/36 Linfeng_20120125_PCAF_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 430 2.82 0.00 0 8 25 3 401.21097 1201.61835 0.96 4.63 518 518 MS2 27/40 Linfeng_122411_rIgG_10.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 2.82 0.00 0 34 100 2 854.39594 1707.78459 7.24 39.14 4916 4916 MS2 19/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 377 2.82 0.00 1 14 100 3 412.23410 1234.68775 7.04 24.88 2004 2004 MS2 21/36 Linfeng_20120125_PCAF_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.82 0.00 0 30 25 3 599.67560 1797.01224 0.29 49.65 5902 5902 MS2 21/60 Linfeng_091311_rIgG_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.82 0.00 0 23 16 2 583.29584 1165.58440 -0.35 3.50 350 350 MS2 15/16 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.81 0.00 0 4 100 2 998.99554 1996.98381 6.41 46.26 7003 7003 MS2 21/32 Linfeng_20120125_PCAF_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 267 2.81 0.00 0 2 13 2 631.80273 1262.59819 0.78 4.61 514 514 MS2 21/26 Linfeng_122411_rIgG_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 2.80 0.00 0 23 100 2 854.39563 1707.78398 6.88 38.52 4543 4543 MS2 16/36 Linfeng_20120125_PCAF_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 2.79 0.00 0 20 100 3 781.67297 2343.00437 8.49 42.97 5261 5261 MS2 29/104 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.79 0.00 1 16 92 3 412.23422 1234.68811 7.33 25.02 1697 1697 MS2 22/36 Linfeng_20120125_PCAF_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.79 0.00 0 21 100 2 695.84814 1390.68901 5.81 33.39 3919 3919 MS2 19/24 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.78 0.00 1 9 39 3 412.23419 1234.68802 7.26 24.98 1835 1835 MS2 20/36 Linfeng_20120125_PCAF_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 164 2.78 0.00 0 4 25 2 691.32477 1381.64226 -4.32 26.05 2923 2923 MS2 17/22 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 409 2.78 0.00 1 19 25 3 412.23193 1234.68125 1.77 23.78 2138 2138 MS2 19/36 Linfeng_122411_rIgG_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 170 2.78 0.00 0 1 7 2 691.32379 1381.64031 -5.73 25.82 2591 2591 MS2 18/22 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 180 2.78 0.00 0 37 100 2 899.01703 1797.02678 8.38 55.56 8263 8263 MS2 20/30 Linfeng_20120125_PCAF_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.77 0.00 0 3 13 2 631.80054 1262.59380 -2.70 22.32 2376 2376 MS2 21/26 Linfeng_091311_rIgG_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 2.77 0.00 0 4 73 2 691.33240 1381.65752 6.73 25.71 2090 2090 MS2 18/22 Linfeng_20120125_PCAF_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 201 2.77 0.00 0 41 25 2 899.00897 1797.01067 -0.59 60.46 6974 6974 MS2 19/30 Linfeng_091311_rIgG_4.raw High SQYEQLAEQNRKDAEAWFNEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 256 2.77 0.00 2 17 100 3 862.08032 2584.22641 7.76 46.22 6368 6368 MS2 23/80 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 2.76 0.00 1 15 95 3 412.23395 1234.68729 6.66 25.23 2043 2043 MS2 20/36 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 340 2.76 0.00 1 16 100 3 412.23450 1234.68894 8.00 25.42 2069 2069 MS2 18/36 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 370 2.76 0.00 0 9 13 3 464.23138 1390.67960 -0.96 27.80 2730 2730 MS2 21/48 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.76 0.00 0 8 25 3 599.67548 1797.01187 0.09 56.89 6499 6499 MS2 23/60 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.75 0.00 0 11 25 3 599.67566 1797.01242 0.39 52.27 6236 6236 MS2 23/60 Linfeng_091311_rIgG_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 165 2.75 0.00 0 1 25 2 691.32477 1381.64226 -4.32 26.00 2853 2853 MS2 18/22 Linfeng_091311_rIgG_9.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 2.75 0.00 1 3 3 2 747.37054 1493.73381 -0.35 3.56 359 359 MS2 16/22 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.75 0.00 0 37 25 3 599.67590 1797.01316 0.80 57.20 6175 6175 MS2 24/60 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.75 0.00 1 19 100 3 412.23425 1234.68821 7.41 24.03 1671 1671 MS2 19/36 Linfeng_20120125_PCAF_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 398 2.75 0.00 0 21 100 2 695.84961 1390.69194 7.92 31.77 2787 2787 MS2 19/24 Linfeng_20120125_PCAF_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.75 0.00 0 3 73 2 691.33258 1381.65788 6.99 25.68 2084 2084 MS2 18/22 Linfeng_20120125_PCAF_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 141 2.74 0.00 0 34 25 3 569.93066 1707.77744 3.05 32.57 2348 2348 MS2 33/72 Linfeng_122411_rIgG_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.74 0.00 0 2 6 2 691.32452 1381.64177 -4.67 26.10 2892 2892 MS2 18/22 Linfeng_091311_rIgG_6.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 302 2.73 0.00 1 0 100 2 1106.56042 2212.11357 7.03 46.68 6163 6163 MS2 18/36 Linfeng_20120125_PCAF_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 163 2.72 0.00 0 1 25 2 691.32477 1381.64226 -4.32 25.91 2964 2964 MS2 17/22 Linfeng_091311_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.72 0.00 0 0 25 3 599.67621 1797.01407 1.31 57.18 6721 6721 MS2 27/60 Linfeng_091311_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 315 2.72 0.00 0 5 25 2 516.30347 1031.59966 1.27 30.01 2917 2917 MS2 15/16 Linfeng_122411_rIgG_4.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 205 2.72 0.00 1 29 100 2 619.30023 1237.59319 6.74 26.50 2191 2191 MS2 15/18 Linfeng_20120125_PCAF_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.71 0.00 1 4 25 3 478.92975 1434.77469 3.27 22.89 1851 1851 MS2 24/40 Linfeng_122411_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 389 2.71 0.00 0 18 25 3 464.23242 1390.68271 1.28 29.01 2842 2842 MS2 21/48 Linfeng_122411_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.71 0.00 1 22 100 3 412.23404 1234.68756 6.89 23.90 1717 1717 MS2 19/36 Linfeng_20120125_PCAF_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.70 0.00 0 6 25 2 691.32538 1381.64348 -3.43 26.01 2826 2826 MS2 18/22 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 181 2.70 0.00 0 24 80 3 599.67810 1797.01975 4.47 55.17 7019 7019 MS2 19/60 Linfeng_20120125_PCAF_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 281 2.69 0.00 0 14 2 2 583.29529 1165.58330 -1.30 3.47 367 367 MS2 15/16 Linfeng_122411_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.69 0.00 1 3 70 2 717.89368 1434.78008 7.02 34.96 3880 3880 MS2 17/20 Linfeng_20120125_PCAF_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 398 2.69 0.00 1 17 25 3 478.92935 1434.77350 2.44 22.54 1844 1844 MS2 21/40 Linfeng_122411_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.69 0.00 0 1 25 2 691.32471 1381.64214 -4.40 25.75 2855 2855 MS2 18/22 Linfeng_091311_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 414 2.69 0.00 1 5 25 2 717.88947 1434.77165 1.15 4.71 535 535 MS2 16/20 Linfeng_122411_rIgG_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.68 0.00 0 7 25 2 631.80084 1262.59441 -2.22 22.56 2409 2409 MS2 21/26 Linfeng_091311_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 353 2.68 0.00 1 12 25 2 717.89020 1434.77312 2.17 25.70 2345 2345 MS2 17/20 Linfeng_122411_rIgG_4.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 2.68 0.00 0 4 23 2 631.79999 1262.59270 -3.57 22.58 2451 2451 MS2 21/26 Linfeng_091311_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.68 0.00 1 3 16 2 717.88654 1434.76579 -2.93 27.74 3165 3165 MS2 17/20 Linfeng_091311_rIgG_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 200 2.67 0.00 1 8 18 3 413.19846 1237.58081 -3.25 27.28 2791 2791 MS2 21/36 Linfeng_091311_rIgG_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 180 2.67 0.00 1 20 25 2 619.29382 1237.58037 -3.61 27.23 3095 3095 MS2 16/18 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.67 0.00 0 24 25 3 599.67548 1797.01187 0.09 57.72 6589 6589 MS2 27/60 Linfeng_091311_rIgG_7.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.66 0.00 0 17 25 2 601.31378 1201.62029 2.57 28.38 2759 2759 MS2 17/20 Linfeng_122411_rIgG_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.66 0.00 0 8 25 2 583.29419 1165.58110 -3.18 24.11 2363 2363 MS2 15/16 Linfeng_091311_rIgG_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 400 2.66 0.00 1 8 25 2 717.88800 1434.76872 -0.89 27.74 3121 3121 MS2 17/20 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 403 2.65 0.00 1 16 25 2 617.84106 1234.67485 -3.41 24.56 2726 2726 MS2 17/18 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 2.65 0.00 0 31 100 2 695.84912 1390.69097 7.22 31.64 2921 2921 MS2 17/24 Linfeng_20120125_PCAF_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.65 0.00 1 11 100 2 619.29913 1237.59099 4.97 27.06 2402 2402 MS2 16/18 Linfeng_20120125_PCAF_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 310 2.65 0.00 0 7 6 2 583.29443 1165.58159 -2.76 24.55 2627 2627 MS2 15/16 Linfeng_091311_rIgG_5.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 312 2.64 0.00 0 4 8 2 583.29468 1165.58208 -2.34 24.60 2688 2688 MS2 15/16 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.64 0.00 1 36 25 3 412.23221 1234.68207 2.44 23.68 2071 2071 MS2 20/36 Linfeng_122411_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 377 2.64 0.00 1 8 27 3 738.04187 2212.11106 5.89 46.84 6013 6013 MS2 21/72 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 385 2.64 0.00 1 24 100 3 412.23392 1234.68720 6.59 25.91 2132 2132 MS2 20/36 Linfeng_20120125_PCAF_1.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.63 0.00 1 13 100 2 747.37592 1493.74455 6.84 18.31 1375 1375 MS2 14/22 Linfeng_20120125_PCAF_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 2.63 0.00 0 23 25 2 691.32977 1381.65227 2.93 24.98 1912 1912 MS2 15/22 Linfeng_122411_rIgG_9.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.63 0.00 0 2 7 2 691.32452 1381.64177 -4.67 25.83 2858 2858 MS2 18/22 Linfeng_091311_rIgG_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 309 2.63 0.00 0 5 9 2 583.29370 1165.58013 -4.02 24.56 2718 2718 MS2 15/16 Linfeng_091311_rIgG_8.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 297 2.63 0.00 1 0 100 2 1106.55945 2212.11162 6.15 46.70 5981 5981 MS2 15/36 Linfeng_20120125_PCAF_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 313 2.63 0.00 0 6 13 2 583.29407 1165.58086 -3.39 24.26 2643 2643 MS2 15/16 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.62 0.00 1 3 63 2 617.84729 1234.68730 6.68 25.66 2082 2082 MS2 17/18 Linfeng_20120125_PCAF_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.62 0.00 0 39 25 3 464.23050 1390.67694 -2.87 29.93 3463 3463 MS2 22/48 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 2.62 0.00 0 19 28 2 899.01385 1797.02043 4.85 55.17 7458 7458 MS2 19/30 Linfeng_20120125_PCAF_9.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 185 2.62 0.00 0 22 25 3 455.88330 1365.63535 -2.95 23.25 2473 2473 MS2 20/40 Linfeng_091311_rIgG_9.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 2.62 0.00 1 1 100 2 717.89362 1434.77995 6.94 35.18 3774 3774 MS2 17/20 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 2.62 0.00 1 2 64 2 617.84692 1234.68657 6.08 25.66 1934 1934 MS2 17/18 Linfeng_20120125_PCAF_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 350 2.62 0.00 1 8 25 2 717.89166 1434.77605 4.21 21.85 1737 1737 MS2 17/20 Linfeng_122411_rIgG_3.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.62 0.00 0 6 6 2 583.29388 1165.58049 -3.71 24.23 2678 2678 MS2 15/16 Linfeng_091311_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.61 0.00 1 19 97 3 478.93140 1434.77964 6.72 35.07 3906 3906 MS2 21/40 Linfeng_20120125_PCAF_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 2.61 0.00 0 8 25 2 691.33063 1381.65398 4.17 25.05 1792 1792 MS2 16/22 Linfeng_122411_rIgG_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 2.61 0.00 1 15 100 2 619.30042 1237.59355 7.04 26.02 2155 2155 MS2 16/18 Linfeng_20120125_PCAF_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 164 2.61 0.00 0 3 0 2 691.32690 1381.64653 -1.22 3.84 428 428 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 2.61 0.00 0 31 25 2 691.32941 1381.65154 2.40 24.86 2232 2232 MS2 17/22 Linfeng_122411_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.60 0.00 0 21 25 2 691.32831 1381.64934 0.81 24.84 2331 2331 MS2 17/22 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 2.60 0.00 0 18 25 3 599.67633 1797.01444 1.51 55.55 6668 6668 MS2 22/60 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.60 0.00 0 20 100 2 695.84906 1390.69084 7.13 31.68 3144 3144 MS2 16/24 Linfeng_20120125_PCAF_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 2.60 0.00 0 19 100 3 666.33344 1996.98575 7.38 48.39 7056 7056 MS2 21/64 Linfeng_20120125_PCAF_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.60 0.00 1 17 100 3 478.93118 1434.77900 6.27 36.12 4583 4583 MS2 19/40 Linfeng_20120125_PCAF_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 229 2.60 0.00 1 30 100 2 619.30011 1237.59294 6.55 26.42 2177 2177 MS2 15/18 Linfeng_20120125_PCAF_6.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 2.59 0.00 1 14 100 2 619.30017 1237.59307 6.65 26.59 2209 2209 MS2 15/18 Linfeng_20120125_PCAF_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 321 2.59 0.00 0 19 25 2 583.29761 1165.58794 2.68 21.33 1821 1821 MS2 15/16 Linfeng_122411_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.59 0.00 1 3 16 2 617.84784 1234.68840 7.57 24.66 1871 1871 MS2 17/18 Linfeng_20120125_PCAF_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 175 2.59 0.00 0 18 25 2 691.32806 1381.64885 0.46 24.27 2207 2207 MS2 18/22 Linfeng_122411_rIgG_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 388 2.59 0.00 0 31 25 3 464.23242 1390.68271 1.28 28.45 2711 2711 MS2 19/48 Linfeng_122411_rIgG_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 492 2.59 0.00 0 7 81 2 601.31653 1201.62578 7.14 31.79 3635 3635 MS2 17/20 Linfeng_20120125_PCAF_8.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 2.58 0.00 1 19 25 3 413.20056 1237.58713 1.85 4.66 527 527 MS2 24/36 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 164 2.58 0.00 0 36 100 2 899.01233 1797.01738 3.15 48.88 7192 7192 MS2 18/30 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 121 2.58 0.00 0 57 100 2 555.25165 1109.49602 5.54 36.41 4651 4651 MS2 14/16 Linfeng_20120125_PCAF_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 2.58 0.00 0 0 25 2 691.32886 1381.65044 1.60 24.93 1867 1867 MS2 17/22 Linfeng_122411_rIgG_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.57 0.00 0 10 13 2 555.24963 1109.49199 1.91 31.59 3010 3010 MS2 13/16 Linfeng_122411_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 1 1 25 2 717.88727 1434.76726 -1.91 28.02 3128 3128 MS2 17/20 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.57 0.00 1 2 100 2 617.84784 1234.68840 7.57 23.70 1747 1747 MS2 16/18 Linfeng_20120125_PCAF_8.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 157 2.56 0.00 0 24 100 2 854.39600 1707.78472 7.31 40.90 5270 5270 MS2 19/36 Linfeng_20120125_PCAF_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 359 2.56 0.00 1 23 100 2 617.84668 1234.68608 5.69 26.58 1998 1998 MS2 14/18 Linfeng_20120125_PCAF_9.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.55 0.00 0 9 25 3 401.20950 1201.61396 -2.70 29.45 3397 3397 MS2 26/40 Linfeng_091311_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 6 9 2 516.30341 1031.59953 1.15 29.90 2789 2789 MS2 15/16 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 86 2.55 0.00 0 11 16 2 555.25000 1109.49272 2.57 31.47 2963 2963 MS2 13/16 Linfeng_122411_rIgG_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 261 2.55 0.00 0 10 25 2 631.80273 1262.59819 0.78 3.27 315 315 MS2 20/26 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.55 0.00 0 27 100 2 695.84937 1390.69145 7.57 31.77 2992 2992 MS2 19/24 Linfeng_20120125_PCAF_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.55 0.00 0 15 100 2 695.84851 1390.68974 6.34 31.42 3526 3526 MS2 21/24 Linfeng_20120125_PCAF_5.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 262 2.55 0.00 1 14 25 3 396.57211 1187.70179 1.95 28.70 2801 2801 MS2 23/36 Linfeng_122411_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 2.55 0.00 1 28 25 2 717.89166 1434.77605 4.21 21.34 1718 1718 MS2 17/20 Linfeng_122411_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 2.55 0.00 1 4 25 2 717.88757 1434.76787 -1.49 27.73 3126 3126 MS2 17/20 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 2.54 0.00 0 40 25 3 599.67426 1797.00821 -1.95 59.32 6741 6741 MS2 23/60 Linfeng_091311_rIgG_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 197 2.54 0.00 0 27 25 2 691.32922 1381.65117 2.13 24.96 2103 2103 MS2 17/22 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 139 2.54 0.00 0 21 100 2 854.39752 1707.78777 9.10 42.01 5535 5535 MS2 14/36 Linfeng_20120125_PCAF_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.53 0.00 1 3 25 3 478.92984 1434.77497 3.46 21.83 1735 1735 MS2 24/40 Linfeng_122411_rIgG_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 185 2.53 0.00 0 12 100 2 691.33191 1381.65654 6.02 25.49 1843 1843 MS2 16/22 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.53 0.00 0 41 100 2 555.25256 1109.49785 7.19 38.01 4663 4663 MS2 14/16 Linfeng_20120125_PCAF_10.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 295 2.52 0.00 1 4 13 2 747.36829 1493.72930 -3.38 2.11 274 274 MS2 15/22 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 162 2.52 0.00 0 42 100 2 854.39685 1707.78642 8.31 38.53 4454 4454 MS2 17/36 Linfeng_20120125_PCAF_9.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 204 2.52 0.00 1 20 25 3 413.19855 1237.58109 -3.03 27.54 3084 3084 MS2 17/36 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 371 2.52 0.00 1 5 100 2 617.84705 1234.68682 6.28 25.96 1909 1909 MS2 15/18 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 359 2.52 0.00 1 1 100 2 617.84631 1234.68535 5.09 25.87 1848 1848 MS2 15/18 Linfeng_20120125_PCAF_9.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 2.52 0.00 0 4 3 2 583.29547 1165.58367 -0.98 3.72 382 382 MS2 15/16 Linfeng_122411_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.51 0.00 0 3 3 2 516.30286 1031.59844 0.08 3.52 337 337 MS2 15/16 Linfeng_122411_rIgG_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 90 2.51 0.00 0 12 25 2 555.24683 1109.48638 -3.15 33.12 3823 3823 MS2 13/16 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.51 0.00 1 2 47 2 617.84827 1234.68926 8.26 23.63 1699 1699 MS2 17/18 Linfeng_20120125_PCAF_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 418 2.50 0.00 1 6 25 3 478.92654 1434.76508 -3.43 28.02 3130 3130 MS2 21/40 Linfeng_091311_rIgG_9.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 2.50 0.00 1 18 100 2 619.29962 1237.59197 5.76 26.78 2076 2076 MS2 15/18 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 86 2.50 0.00 0 9 23 2 555.24951 1109.49175 1.69 31.61 3126 3126 MS2 13/16 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 2.49 0.00 1 1 100 2 617.84711 1234.68694 6.38 25.50 2083 2083 MS2 17/18 Linfeng_20120125_PCAF_10.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.48 0.00 0 38 25 3 599.67505 1797.01059 -0.63 56.36 6631 6631 MS2 20/60 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 90 2.48 0.00 0 8 4 2 555.24835 1109.48943 -0.40 31.48 3238 3238 MS2 13/16 Linfeng_122411_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 2.48 0.00 0 32 100 2 601.31586 1201.62444 6.02 32.09 3276 3276 MS2 15/20 Linfeng_20120125_PCAF_10.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 2.48 0.00 0 2 25 2 631.80017 1262.59307 -3.28 22.33 2372 2372 MS2 21/26 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 82 2.47 0.00 0 16 25 2 555.24988 1109.49248 2.35 31.23 2714 2714 MS2 13/16 Linfeng_122411_rIgG_9.raw Medium RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 330 2.47 0.00 1 17 25 3 396.57196 1187.70133 1.56 27.94 2499 2499 MS2 25/36 Linfeng_122411_rIgG_3.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.47 0.00 1 11 25 3 478.92978 1434.77478 3.33 23.89 1967 1967 MS2 21/40 Linfeng_122411_rIgG_3.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 203 2.47 0.00 1 14 25 3 413.20016 1237.58594 0.89 25.89 2427 2427 MS2 21/36 Linfeng_122411_rIgG_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 2.47 0.00 0 28 25 2 601.31360 1201.61992 2.26 27.87 2633 2633 MS2 17/20 Linfeng_122411_rIgG_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 482 2.47 0.00 0 8 100 2 601.31641 1201.62554 6.94 32.07 2995 2995 MS2 17/20 Linfeng_20120125_PCAF_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 209 2.46 0.00 0 20 25 2 691.33124 1381.65520 5.05 19.26 1519 1519 MS2 17/22 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.46 0.00 0 64 100 2 695.84784 1390.68840 5.37 33.10 3303 3303 MS2 14/24 Linfeng_20120125_PCAF_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 191 2.46 0.00 0 10 25 2 691.33014 1381.65300 3.46 21.81 1767 1767 MS2 16/22 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 2.46 0.00 1 7 100 2 747.37561 1493.74394 6.43 16.09 1221 1221 MS2 13/22 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.46 0.00 0 29 100 2 555.25269 1109.49809 7.41 36.78 4307 4307 MS2 14/16 Linfeng_20120125_PCAF_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.46 0.00 1 66 100 2 617.84521 1234.68315 3.31 27.06 2498 2498 MS2 15/18 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 2.46 0.00 1 2 56 2 617.84711 1234.68694 6.38 25.61 1767 1767 MS2 17/18 Linfeng_20120125_PCAF_3.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 2.45 0.00 0 11 25 2 583.29437 1165.58147 -2.87 24.25 2647 2647 MS2 15/16 Linfeng_091311_rIgG_3.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 312 2.45 0.00 0 10 25 2 583.29431 1165.58135 -2.97 24.51 2651 2651 MS2 15/16 Linfeng_091311_rIgG_7.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.45 0.00 0 29 25 3 599.67450 1797.00895 -1.54 48.96 5809 5809 MS2 24/60 Linfeng_091311_rIgG_7.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.44 0.00 1 34 100 3 478.93146 1434.77982 6.84 34.39 3349 3349 MS2 19/40 Linfeng_20120125_PCAF_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 2.44 0.00 0 17 100 2 691.33124 1381.65520 5.05 25.83 1840 1840 MS2 17/22 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 88 2.43 0.00 0 4 4 2 555.24835 1109.48943 -0.40 32.06 3240 3240 MS2 14/16 Linfeng_122411_rIgG_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.43 0.00 0 3 44 2 555.25250 1109.49773 7.08 33.96 3497 3497 MS2 13/16 Linfeng_20120125_PCAF_4.raw Medium QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 2.43 0.00 0 12 25 3 464.23074 1390.67768 -2.34 30.16 3436 3436 MS2 21/48 Linfeng_091311_rIgG_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.43 0.00 0 3 25 2 631.80035 1262.59343 -2.99 22.54 2373 2373 MS2 21/26 Linfeng_091311_rIgG_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 362 2.43 0.00 1 3 61 2 617.84741 1234.68755 6.87 24.95 1766 1766 MS2 16/18 Linfeng_20120125_PCAF_4.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.43 0.00 0 40 25 3 599.67560 1797.01224 0.29 50.56 6051 6051 MS2 18/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 2.43 0.00 1 3 55 2 617.84784 1234.68840 7.57 25.13 1852 1852 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.43 0.00 0 9 100 2 583.30011 1165.59294 6.98 23.84 1568 1568 MS2 14/16 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 362 2.43 0.00 1 4 48 2 617.84772 1234.68816 7.37 24.97 2045 2045 MS2 16/18 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.43 0.00 1 1 100 2 617.84717 1234.68706 6.48 25.50 1766 1766 MS2 17/18 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 85 2.43 0.00 0 13 5 2 555.24652 1109.48577 -3.70 32.96 3554 3554 MS2 13/16 Linfeng_091311_rIgG_1.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 424 2.42 0.00 1 5 1 3 478.92694 1434.76627 -2.60 27.82 2865 2865 MS2 23/40 Linfeng_091311_rIgG_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 192 2.42 0.00 0 18 100 2 691.33191 1381.65654 6.02 23.04 1636 1636 MS2 14/22 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 84 2.42 0.00 0 10 5 2 555.24640 1109.48552 -3.92 32.90 3858 3858 MS2 13/16 Linfeng_091311_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.42 0.00 0 13 25 2 691.33075 1381.65422 4.34 26.45 2020 2020 MS2 12/22 Linfeng_122411_rIgG_7.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 252 2.42 0.00 0 31 25 2 631.80365 1262.60002 2.23 21.36 1619 1619 MS2 16/26 Linfeng_122411_rIgG_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 362 2.42 0.00 1 4 100 2 617.84711 1234.68694 6.38 23.64 1779 1779 MS2 17/18 Linfeng_20120125_PCAF_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 336 2.42 0.00 0 13 25 2 583.29254 1165.57781 -6.01 24.40 2749 2749 MS2 15/16 Linfeng_091311_rIgG_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 358 2.41 0.00 1 3 100 2 617.84686 1234.68645 5.98 23.78 1704 1704 MS2 17/18 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.41 0.00 0 46 100 2 555.25250 1109.49773 7.08 38.18 4702 4702 MS2 14/16 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.41 0.00 0 77 100 2 695.84833 1390.68938 6.07 33.26 3339 3339 MS2 16/24 Linfeng_20120125_PCAF_4.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.41 0.00 0 0 25 3 599.67639 1797.01462 1.61 56.15 6631 6631 MS2 21/60 Linfeng_091311_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 481 2.41 0.00 0 29 100 2 601.31647 1201.62566 7.04 31.59 2953 2953 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.41 0.00 1 12 25 3 738.03656 2212.09513 -1.31 36.12 3184 3184 MS2 19/72 Linfeng_122411_rIgG_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.41 0.00 0 19 25 2 555.24890 1109.49053 0.59 31.21 2804 2804 MS2 13/16 Linfeng_122411_rIgG_10.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.41 0.00 0 11 25 2 601.31348 1201.61968 2.06 27.82 2484 2484 MS2 18/20 Linfeng_122411_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 401 2.41 0.00 1 20 25 2 717.88739 1434.76750 -1.74 27.92 3084 3084 MS2 17/20 Linfeng_091311_rIgG_5.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 2.41 0.00 0 26 25 2 583.29437 1165.58147 -2.87 24.46 2642 2642 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 320 2.41 0.00 0 5 9 2 516.30383 1031.60039 1.98 29.88 2755 2755 MS2 15/16 Linfeng_122411_rIgG_3.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 284 2.41 0.00 1 9 22 2 498.26385 995.52043 0.75 3.24 310 310 MS2 11/12 Linfeng_122411_rIgG_2.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.40 0.00 1 26 25 3 413.20123 1237.58915 3.48 18.77 1477 1477 MS2 21/36 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 2.40 0.00 1 7 100 2 747.37555 1493.74382 6.35 16.05 1017 1017 MS2 14/22 Linfeng_20120125_PCAF_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.40 0.00 0 0 100 2 691.33234 1381.65740 6.64 23.06 1666 1666 MS2 17/22 Linfeng_20120125_PCAF_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.40 0.00 0 4 100 2 691.33203 1381.65679 6.20 26.22 2196 2196 MS2 17/22 Linfeng_20120125_PCAF_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.40 0.00 1 25 100 2 617.84747 1234.68767 6.97 27.46 2373 2373 MS2 15/18 Linfeng_20120125_PCAF_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.40 0.00 0 13 25 2 691.32953 1381.65178 2.58 24.90 1969 1969 MS2 17/22 Linfeng_122411_rIgG_10.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.40 0.00 1 3 20 3 478.93103 1434.77854 5.95 34.72 4244 4244 MS2 25/40 Linfeng_20120125_PCAF_1.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 454 2.40 0.00 1 5 13 3 478.92828 1434.77030 0.21 4.64 524 524 MS2 25/40 Linfeng_122411_rIgG_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 250 2.39 0.00 0 17 25 2 631.79962 1262.59197 -4.15 22.43 2343 2343 MS2 21/26 Linfeng_091311_rIgG_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.39 0.00 0 33 100 2 695.84943 1390.69158 7.65 31.73 2778 2778 MS2 16/24 Linfeng_20120125_PCAF_3.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 452 2.39 0.00 1 16 1 3 478.92749 1434.76792 -1.45 4.23 493 493 MS2 22/40 Linfeng_122411_rIgG_5.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.38 0.00 0 38 25 3 599.67596 1797.01334 0.90 51.04 5939 5939 MS2 24/60 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 2.38 0.00 1 6 100 2 617.84674 1234.68620 5.79 23.93 1659 1659 MS2 16/18 Linfeng_20120125_PCAF_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 359 2.38 0.00 1 2 82 2 617.84692 1234.68657 6.08 25.76 1948 1948 MS2 17/18 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.38 0.00 0 38 100 2 555.25250 1109.49773 7.08 37.81 4990 4990 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 347 2.38 0.00 1 5 100 2 617.84723 1234.68718 6.58 26.10 1830 1830 MS2 14/18 Linfeng_20120125_PCAF_3.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 2.38 0.00 0 6 100 2 583.29956 1165.59184 6.03 21.01 1399 1399 MS2 15/16 Linfeng_20120125_PCAF_1.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.38 0.00 0 46 25 3 599.67609 1797.01371 1.10 51.10 6052 6052 MS2 20/60 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 369 2.38 0.00 1 29 100 2 617.84686 1234.68645 5.98 27.52 2511 2511 MS2 16/18 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.38 0.00 0 4 22 2 555.25269 1109.49809 7.41 33.88 3634 3634 MS2 14/16 Linfeng_20120125_PCAF_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 2.38 0.00 1 1 85 2 617.84772 1234.68816 7.37 24.53 1638 1638 MS2 17/18 Linfeng_20120125_PCAF_3.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 2.37 0.00 0 7 25 2 601.31311 1201.61894 1.45 4.63 493 493 MS2 17/20 Linfeng_122411_rIgG_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.37 0.00 0 37 88 2 555.25043 1109.49358 3.34 33.51 4068 4068 MS2 13/16 Linfeng_20120125_PCAF_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.37 0.00 1 36 100 2 617.84698 1234.68669 6.18 27.41 2365 2365 MS2 17/18 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 113 2.37 0.00 0 3 6 2 555.25220 1109.49712 6.53 33.90 4042 4042 MS2 13/16 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.37 0.00 1 2 68 2 617.84741 1234.68755 6.87 25.52 1914 1914 MS2 17/18 Linfeng_20120125_PCAF_2.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 394 2.37 0.00 1 21 25 3 478.92957 1434.77414 2.89 20.53 1639 1639 MS2 20/40 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 2.37 0.00 1 2 100 2 617.84723 1234.68718 6.58 25.48 1851 1851 MS2 17/18 Linfeng_20120125_PCAF_7.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 230 2.36 0.00 1 21 100 2 619.29932 1237.59136 5.26 27.04 2054 2054 MS2 14/18 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.36 0.00 0 16 21 2 555.24707 1109.48686 -2.71 32.81 3807 3807 MS2 13/16 Linfeng_091311_rIgG_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.36 0.00 0 3 100 2 691.33215 1381.65703 6.38 23.07 1782 1782 MS2 16/22 Linfeng_20120125_PCAF_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 408 2.36 0.00 0 36 25 2 601.31293 1201.61858 1.15 26.15 2212 2212 MS2 12/20 Linfeng_122411_rIgG_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.36 0.00 0 21 25 2 516.30408 1031.60088 2.45 29.16 2445 2445 MS2 15/16 Linfeng_122411_rIgG_9.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 200 2.36 0.00 1 15 25 3 413.19873 1237.58164 -2.59 27.26 3055 3055 MS2 19/36 Linfeng_091311_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.36 0.00 0 6 100 2 691.33246 1381.65764 6.82 23.04 1522 1522 MS2 16/22 Linfeng_20120125_PCAF_9.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 319 2.36 0.00 0 31 25 2 583.29761 1165.58794 2.68 23.40 1936 1936 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 2.36 0.00 0 46 91 3 781.66705 2342.98661 0.91 43.16 6254 6254 MS2 27/104 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 365 2.36 0.00 1 3 45 2 617.84729 1234.68730 6.68 25.67 2059 2059 MS2 17/18 Linfeng_20120125_PCAF_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 495 2.36 0.00 0 7 100 2 601.31622 1201.62517 6.63 31.92 2816 2816 MS2 16/20 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 91 2.36 0.00 0 19 25 2 555.24927 1109.49126 1.25 31.50 2901 2901 MS2 14/16 Linfeng_122411_rIgG_8.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 2.35 0.00 1 16 25 3 413.19806 1237.57962 -4.22 27.52 3059 3059 MS2 18/36 Linfeng_091311_rIgG_7.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 303 2.35 0.00 0 8 3 2 497.25391 993.50054 0.52 3.30 319 319 MS2 13/14 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 350 2.35 0.00 1 2 66 2 617.84735 1234.68743 6.77 25.70 1779 1779 MS2 16/18 Linfeng_20120125_PCAF_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 408 2.35 0.00 0 22 100 2 695.84888 1390.69048 6.86 31.91 2808 2808 MS2 18/24 Linfeng_20120125_PCAF_7.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 256 2.35 0.00 1 21 25 2 594.35443 1187.70159 1.78 27.92 2497 2497 MS2 15/18 Linfeng_122411_rIgG_3.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.35 0.00 1 66 25 3 413.19992 1237.58521 0.30 23.92 2105 2105 MS2 16/36 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 2.34 0.00 1 77 100 2 617.84583 1234.68437 4.30 26.99 2480 2480 MS2 16/18 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.34 0.00 0 3 42 2 555.25226 1109.49724 6.64 34.21 3768 3768 MS2 13/16 Linfeng_20120125_PCAF_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 451 2.34 0.00 0 24 100 2 695.85046 1390.69365 9.15 11.24 815 815 MS2 14/24 Linfeng_20120125_PCAF_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 2.34 0.00 0 15 100 2 691.33197 1381.65666 6.11 23.14 1499 1499 MS2 17/22 Linfeng_20120125_PCAF_3.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 2.34 0.00 1 10 25 2 747.36823 1493.72917 -3.46 20.58 2095 2095 MS2 14/22 Linfeng_091311_rIgG_9.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.34 0.00 1 23 25 3 413.20099 1237.58841 2.89 20.22 1581 1581 MS2 17/36 Linfeng_122411_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.34 0.00 0 0 25 2 695.84717 1390.68706 4.41 29.05 2074 2074 MS2 16/24 Linfeng_122411_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 411 2.34 0.00 1 4 20 2 617.84155 1234.67583 -2.62 24.62 2699 2699 MS2 17/18 Linfeng_091311_rIgG_3.raw Medium LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.34 0.00 1 23 25 3 412.23224 1234.68216 2.51 23.87 1772 1772 MS2 19/36 Linfeng_122411_rIgG_7.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 316 2.33 0.00 1 3 100 2 747.37537 1493.74346 6.10 18.31 1303 1303 MS2 13/22 Linfeng_20120125_PCAF_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.33 0.00 1 16 100 2 619.30005 1237.59282 6.45 26.89 2094 2094 MS2 15/18 Linfeng_20120125_PCAF_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 2.33 0.00 1 2 25 2 619.29712 1237.58696 1.71 4.90 558 558 MS2 13/18 Linfeng_122411_rIgG_2.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 456 2.33 0.00 1 6 6 3 478.92825 1434.77021 0.14 4.54 509 509 MS2 24/40 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 2.33 0.00 1 2 100 2 617.84668 1234.68608 5.69 25.99 1972 1972 MS2 14/18 Linfeng_20120125_PCAF_2.raw Medium SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 370 2.33 0.00 1 9 31 3 738.04205 2212.11161 6.14 46.75 5992 5992 MS2 20/72 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.33 0.00 1 2 100 2 617.84698 1234.68669 6.18 24.03 1583 1583 MS2 16/18 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 405 2.33 0.00 1 12 25 2 617.84106 1234.67485 -3.41 24.50 2418 2418 MS2 17/18 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.32 0.00 1 2 100 2 617.84753 1234.68779 7.07 24.73 1953 1953 MS2 16/18 Linfeng_20120125_PCAF_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 322 2.32 0.00 1 2 100 2 717.89349 1434.77971 6.77 35.10 3583 3583 MS2 17/20 Linfeng_20120125_PCAF_2.raw Medium QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 2.32 0.00 0 30 25 3 464.23087 1390.67804 -2.08 29.95 3421 3421 MS2 18/48 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.32 0.00 0 50 100 2 555.25275 1109.49822 7.52 38.10 4684 4684 MS2 14/16 Linfeng_20120125_PCAF_10.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.32 0.00 1 1 25 2 747.37006 1493.73284 -1.01 20.33 2095 2095 MS2 14/22 Linfeng_091311_rIgG_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.31 0.00 0 41 25 2 583.29791 1165.58855 3.21 23.36 1798 1798 MS2 14/16 Linfeng_122411_rIgG_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 120 2.31 0.00 0 3 40 2 555.25250 1109.49773 7.08 34.01 3262 3262 MS2 13/16 Linfeng_20120125_PCAF_3.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 452 2.31 0.00 1 0 6 3 478.92715 1434.76691 -2.15 3.96 399 399 MS2 19/40 Linfeng_122411_rIgG_8.raw Medium QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.31 0.00 0 8 25 3 464.23053 1390.67704 -2.80 30.13 3380 3380 MS2 22/48 Linfeng_091311_rIgG_5.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.31 0.00 1 10 25 2 594.35162 1187.69597 -2.95 29.74 3126 3126 MS2 15/18 Linfeng_091311_rIgG_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 203 2.31 0.00 1 24 25 2 619.29858 1237.58989 4.08 16.80 1324 1324 MS2 13/18 Linfeng_122411_rIgG_2.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.31 0.00 0 39 25 3 599.67456 1797.00913 -1.44 46.56 5511 5511 MS2 26/60 Linfeng_091311_rIgG_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 2.31 0.00 1 4 25 2 717.89160 1434.77593 4.13 22.87 1849 1849 MS2 15/20 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 417 2.30 0.00 1 4 25 2 617.84125 1234.67522 -3.11 24.90 2704 2704 MS2 17/18 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.30 0.00 1 27 25 2 617.84430 1234.68132 1.83 22.24 1939 1939 MS2 13/18 Linfeng_122411_rIgG_6.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.30 0.00 0 0 25 3 599.67633 1797.01444 1.51 56.77 6528 6528 MS2 26/60 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 2.30 0.00 1 3 59 2 617.84784 1234.68840 7.57 25.25 1720 1720 MS2 17/18 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.29 0.00 1 19 100 2 617.84741 1234.68755 6.87 27.79 2099 2099 MS2 13/18 Linfeng_20120125_PCAF_3.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 317 2.29 0.00 1 3 25 2 747.36902 1493.73076 -2.40 20.26 2120 2120 MS2 15/22 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.29 0.00 1 4 100 2 617.84729 1234.68730 6.68 24.50 1642 1642 MS2 15/18 Linfeng_20120125_PCAF_9.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.29 0.00 1 3 25 2 747.36951 1493.73174 -1.74 20.54 2107 2107 MS2 16/22 Linfeng_091311_rIgG_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 13 25 2 516.30334 1031.59941 1.03 29.77 2679 2679 MS2 15/16 Linfeng_122411_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.29 0.00 1 0 25 2 717.89081 1434.77434 3.02 23.88 1965 1965 MS2 14/20 Linfeng_122411_rIgG_3.raw Medium RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 2.29 0.00 1 3 25 3 396.57111 1187.69876 -0.59 27.47 2683 2683 MS2 21/36 Linfeng_122411_rIgG_5.raw Medium LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 393 2.29 0.00 1 8 25 3 412.23233 1234.68244 2.73 23.92 1713 1713 MS2 18/36 Linfeng_122411_rIgG_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 2.28 0.00 1 35 100 3 478.92987 1434.77506 3.52 34.85 3921 3921 MS2 22/40 Linfeng_20120125_PCAF_10.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.28 0.00 1 21 25 3 413.20111 1237.58878 3.18 16.73 1319 1319 MS2 15/36 Linfeng_122411_rIgG_2.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 266 2.28 0.00 0 17 25 2 631.80420 1262.60112 3.10 21.46 1577 1577 MS2 20/26 Linfeng_122411_rIgG_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 364 2.28 0.00 1 4 100 2 717.89453 1434.78179 8.21 35.31 3714 3714 MS2 14/20 Linfeng_20120125_PCAF_9.raw Medium SQYEQLAEQNRKDAEAWFNEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 256 2.27 0.00 2 34 100 3 862.08038 2584.22660 7.83 46.04 6325 6325 MS2 20/80 Linfeng_20120125_PCAF_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 2.27 0.00 1 0 100 2 1106.55762 2212.10796 4.49 46.44 6615 6615 MS2 12/36 Linfeng_20120125_PCAF_6.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.27 0.00 1 37 100 3 478.93134 1434.77945 6.59 34.44 3357 3357 MS2 19/40 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.27 0.00 0 32 100 2 555.25220 1109.49712 6.53 37.88 5006 5006 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.27 0.00 1 7 25 2 617.84192 1234.67656 -2.02 24.90 2730 2730 MS2 17/18 Linfeng_091311_rIgG_6.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 294 2.27 0.00 1 5 25 2 747.36975 1493.73223 -1.42 20.57 2141 2141 MS2 14/22 Linfeng_091311_rIgG_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 372 2.26 0.00 0 30 100 2 695.84979 1390.69231 8.18 31.88 2804 2804 MS2 18/24 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.26 0.00 1 1 100 2 617.84680 1234.68633 5.88 24.47 1740 1740 MS2 16/18 Linfeng_20120125_PCAF_7.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.26 0.00 0 7 25 2 601.31293 1201.61858 1.15 4.52 502 502 MS2 19/20 Linfeng_122411_rIgG_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.26 0.00 0 6 58 2 555.25226 1109.49724 6.64 34.92 3870 3870 MS2 14/16 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.26 0.00 1 5 100 2 717.89172 1434.77617 4.30 33.66 4109 4109 MS2 17/20 Linfeng_20120125_PCAF_8.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 244 2.26 0.00 0 44 25 2 631.80029 1262.59331 -3.09 22.60 2387 2387 MS2 20/26 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.26 0.00 1 8 100 2 617.84747 1234.68767 6.97 26.01 1917 1917 MS2 15/18 Linfeng_20120125_PCAF_4.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.25 0.00 1 49 100 2 619.29987 1237.59245 6.15 26.20 2290 2290 MS2 14/18 Linfeng_20120125_PCAF_5.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.25 0.00 1 1 25 2 747.36969 1493.73210 -1.50 20.27 2096 2096 MS2 14/22 Linfeng_091311_rIgG_3.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 491 2.25 0.00 0 24 100 2 601.31635 1201.62541 6.83 31.72 2775 2775 MS2 15/20 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.25 0.00 0 36 100 2 555.25232 1109.49736 6.75 33.38 3125 3125 MS2 14/16 Linfeng_20120125_PCAF_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.25 0.00 0 23 25 2 516.30109 1031.59490 -3.35 31.73 3690 3690 MS2 14/16 Linfeng_091311_rIgG_8.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 310 2.24 0.00 1 0 100 2 1106.55981 2212.11235 6.48 46.81 6195 6195 MS2 11/36 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 369 2.24 0.00 1 42 100 2 617.84735 1234.68743 6.77 27.57 2397 2397 MS2 14/18 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 89 2.24 0.00 0 13 10 2 555.24988 1109.49248 2.35 33.76 4152 4152 MS2 13/16 Linfeng_20120125_PCAF_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.23 0.00 1 15 100 2 532.81219 1064.61711 6.76 23.08 1526 1526 MS2 14/16 Linfeng_20120125_PCAF_9.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.23 0.00 0 16 11 2 601.31000 1201.61272 -3.73 29.45 3087 3087 MS2 16/20 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.23 0.00 0 4 27 2 555.25269 1109.49809 7.41 34.50 4317 4317 MS2 13/16 Linfeng_20120125_PCAF_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 2.22 0.00 0 0 100 2 691.33173 1381.65618 5.76 25.89 1854 1854 MS2 16/22 Linfeng_20120125_PCAF_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 365 2.22 0.00 0 33 100 2 695.84857 1390.68987 6.43 1.51 141 141 MS2 15/24 Linfeng_20120125_PCAF_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.22 0.00 0 13 13 2 601.31073 1201.61418 -2.51 29.64 3313 3313 MS2 17/20 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.22 0.00 1 31 100 2 617.84637 1234.68547 5.19 28.18 2668 2668 MS2 13/18 Linfeng_20120125_PCAF_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 349 2.22 0.00 1 3 100 2 617.84753 1234.68779 7.07 26.04 1979 1979 MS2 14/18 Linfeng_20120125_PCAF_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 402 2.21 0.00 0 30 25 2 601.31067 1201.61406 -2.61 29.34 3338 3338 MS2 16/20 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 253 2.21 0.00 1 5 100 2 532.81219 1064.61711 6.76 24.65 1757 1757 MS2 14/16 Linfeng_20120125_PCAF_7.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 2.21 0.00 1 34 100 2 619.29938 1237.59148 5.36 26.20 2298 2298 MS2 14/18 Linfeng_20120125_PCAF_8.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 295 2.21 0.00 1 8 100 2 747.37561 1493.74394 6.43 18.19 1169 1169 MS2 14/22 Linfeng_20120125_PCAF_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.20 0.00 0 4 25 2 631.79993 1262.59258 -3.67 22.45 2477 2477 MS2 20/26 Linfeng_091311_rIgG_10.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 307 2.20 0.00 0 37 6 2 516.30121 1031.59514 -3.11 29.16 2529 2529 MS2 15/16 Linfeng_122411_rIgG_10.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 491 2.20 0.00 0 8 100 2 601.31647 1201.62566 7.04 31.98 2825 2825 MS2 15/20 Linfeng_20120125_PCAF_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 437 2.19 0.00 1 5 25 2 717.88727 1434.76726 -1.91 28.08 3157 3157 MS2 17/20 Linfeng_091311_rIgG_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.19 0.00 0 32 100 2 555.25220 1109.49712 6.53 35.20 3603 3603 MS2 13/16 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.19 0.00 1 2 49 2 617.84747 1234.68767 6.97 24.53 1783 1783 MS2 16/18 Linfeng_20120125_PCAF_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 2.19 0.00 0 46 25 2 516.30389 1031.60051 2.09 30.47 2475 2475 MS2 14/16 Linfeng_122411_rIgG_7.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.19 0.00 0 7 6 2 497.25204 993.49681 -3.23 23.13 2522 2522 MS2 13/14 Linfeng_091311_rIgG_2.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 247 2.19 0.00 1 13 25 2 498.26141 995.51555 -4.16 22.30 2115 2115 MS2 11/12 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 340 2.18 0.00 1 2 53 2 617.84674 1234.68620 5.79 25.60 1925 1925 MS2 16/18 Linfeng_20120125_PCAF_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 399 2.18 0.00 0 6 25 2 601.31354 1201.61980 2.16 27.75 2503 2503 MS2 19/20 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 2.18 0.00 0 3 12 2 516.30157 1031.59587 -2.40 31.44 3625 3625 MS2 15/16 Linfeng_091311_rIgG_3.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 2.18 0.00 0 12 25 2 497.25186 993.49645 -3.60 23.36 2556 2556 MS2 13/14 Linfeng_091311_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 316 2.17 0.00 1 14 100 2 717.89386 1434.78044 7.28 34.29 3325 3325 MS2 16/20 Linfeng_20120125_PCAF_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 322 2.17 0.00 1 6 100 2 717.89368 1434.78008 7.02 34.23 3312 3312 MS2 13/20 Linfeng_20120125_PCAF_7.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 260 2.17 0.00 1 4 98 2 532.81287 1064.61846 8.03 24.50 1780 1780 MS2 14/16 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 2.17 0.00 1 3 30 2 617.84760 1234.68791 7.17 24.65 1895 1895 MS2 17/18 Linfeng_20120125_PCAF_6.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 2.17 0.00 1 16 100 2 619.29974 1237.59221 5.95 26.95 2301 2301 MS2 13/18 Linfeng_20120125_PCAF_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.17 0.00 0 30 100 2 691.33295 1381.65862 7.52 25.51 1755 1755 MS2 15/22 Linfeng_20120125_PCAF_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 397 2.17 0.00 1 27 25 2 617.84143 1234.67558 -2.82 24.63 2693 2693 MS2 17/18 Linfeng_091311_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 2.17 0.00 0 7 100 2 691.33234 1381.65740 6.64 25.97 2145 2145 MS2 17/22 Linfeng_20120125_PCAF_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.17 0.00 0 19 100 2 583.29932 1165.59136 5.62 23.69 1639 1639 MS2 14/16 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.16 0.00 0 6 19 2 555.24683 1109.48638 -3.15 33.03 3764 3764 MS2 13/16 Linfeng_091311_rIgG_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 170 2.16 0.00 0 0 100 2 691.33203 1381.65679 6.20 23.17 1633 1633 MS2 15/22 Linfeng_20120125_PCAF_7.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.16 0.00 1 16 100 2 594.35663 1187.70598 5.48 38.00 5033 5033 MS2 13/18 Linfeng_20120125_PCAF_1.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.16 0.00 1 33 25 2 594.35162 1187.69597 -2.95 29.60 3418 3418 MS2 14/18 Linfeng_091311_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 297 2.16 0.00 0 4 6 2 516.30127 1031.59526 -2.99 31.80 3638 3638 MS2 15/16 Linfeng_091311_rIgG_7.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 225 2.16 0.00 0 19 25 2 631.79944 1262.59160 -4.44 21.31 1981 1981 MS2 20/26 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.16 0.00 0 32 100 2 555.25256 1109.49785 7.19 33.20 3249 3249 MS2 13/16 Linfeng_20120125_PCAF_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 358 2.15 0.00 1 53 100 2 617.84583 1234.68437 4.30 27.15 2521 2521 MS2 15/18 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 128 2.15 0.00 0 37 100 2 555.25244 1109.49761 6.97 35.38 3566 3566 MS2 13/16 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 255 2.15 0.00 1 3 100 2 532.81250 1064.61772 7.34 24.73 1765 1765 MS2 14/16 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 90 2.14 0.00 0 24 25 2 555.24707 1109.48686 -2.71 33.08 3807 3807 MS2 13/16 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 419 2.14 0.00 1 11 25 2 617.84131 1234.67534 -3.01 24.92 2770 2770 MS2 15/18 Linfeng_091311_rIgG_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 178 2.14 0.00 0 46 25 2 691.33014 1381.65300 3.46 23.02 1894 1894 MS2 14/22 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 371 2.14 0.00 1 4 58 2 617.84766 1234.68804 7.27 23.97 1881 1881 MS2 16/18 Linfeng_20120125_PCAF_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 2.14 0.00 0 60 100 2 691.33112 1381.65495 4.87 26.00 1881 1881 MS2 15/22 Linfeng_20120125_PCAF_9.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 393 2.13 0.00 0 5 1 2 516.30090 1031.59453 -3.70 31.69 3385 3385 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 2.13 0.00 0 20 25 2 516.30109 1031.59490 -3.35 31.59 3575 3575 MS2 14/16 Linfeng_091311_rIgG_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 83 2.13 0.00 0 40 25 2 555.24725 1109.48723 -2.38 32.91 3811 3811 MS2 14/16 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.13 0.00 1 4 100 2 532.81171 1064.61614 5.85 24.51 1743 1743 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 2.13 0.00 0 17 100 2 691.33173 1381.65618 5.76 23.14 1812 1812 MS2 17/22 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.12 0.00 0 44 100 2 555.25293 1109.49858 7.85 37.66 4955 4955 MS2 13/16 Linfeng_20120125_PCAF_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.12 0.00 0 31 25 2 601.31024 1201.61321 -3.32 29.61 3361 3361 MS2 18/20 Linfeng_091311_rIgG_6.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 324 2.12 0.00 1 12 25 2 594.35425 1187.70122 1.47 27.88 2520 2520 MS2 15/18 Linfeng_122411_rIgG_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 230 2.12 0.00 1 19 100 2 619.29993 1237.59258 6.25 26.99 1958 1958 MS2 15/18 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.12 0.00 0 5 23 2 555.25232 1109.49736 6.75 34.94 4297 4297 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 134 2.12 0.00 0 36 100 2 555.25238 1109.49748 6.86 33.17 3207 3207 MS2 13/16 Linfeng_20120125_PCAF_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 346 2.12 0.00 0 22 100 2 695.84784 1390.68840 5.37 33.01 3282 3282 MS2 14/24 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.11 0.00 0 24 100 2 555.25262 1109.49797 7.30 35.25 3950 3950 MS2 14/16 Linfeng_20120125_PCAF_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 2.11 0.00 0 38 25 2 631.80457 1262.60185 3.68 21.39 1724 1724 MS2 16/26 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 346 2.11 0.00 1 4 100 2 617.84741 1234.68755 6.87 22.95 1768 1768 MS2 15/18 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 124 2.11 0.00 0 11 100 2 555.25250 1109.49773 7.08 35.03 3489 3489 MS2 14/16 Linfeng_20120125_PCAF_3.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 195 2.11 0.00 1 14 25 2 619.29779 1237.58830 2.80 18.89 1487 1487 MS2 10/18 Linfeng_122411_rIgG_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.11 0.00 0 12 25 2 601.31055 1201.61382 -2.82 29.67 3352 3352 MS2 17/20 Linfeng_091311_rIgG_9.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 2.11 0.00 0 64 25 2 691.33063 1381.65398 4.17 24.08 2017 2017 MS2 16/22 Linfeng_122411_rIgG_2.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.11 0.00 1 27 25 2 594.35187 1187.69646 -2.54 29.87 3396 3396 MS2 15/18 Linfeng_091311_rIgG_6.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 2.10 0.00 1 27 100 2 619.30103 1237.59477 8.03 26.61 2397 2397 MS2 14/18 Linfeng_20120125_PCAF_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 353 2.10 0.00 1 16 100 2 617.84778 1234.68828 7.47 27.62 2635 2635 MS2 15/18 Linfeng_20120125_PCAF_8.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 259 2.10 0.00 1 21 100 2 532.81287 1064.61846 8.03 24.23 1795 1795 MS2 14/16 Linfeng_20120125_PCAF_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 350 2.10 0.00 0 80 100 2 695.84705 1390.68682 4.23 31.69 3613 3613 MS2 16/24 Linfeng_20120125_PCAF_8.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 2.10 0.00 0 21 25 2 497.25208 993.49687 -3.17 23.39 2522 2522 MS2 13/14 Linfeng_091311_rIgG_6.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 316 2.10 0.00 0 4 6 2 516.30579 1031.60430 5.76 34.12 4097 4097 MS2 15/16 Linfeng_20120125_PCAF_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.10 0.00 0 11 100 2 583.29987 1165.59245 6.56 21.02 1589 1589 MS2 15/16 Linfeng_20120125_PCAF_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 366 2.10 0.00 1 10 100 2 617.84686 1234.68645 5.98 23.02 1490 1490 MS2 13/18 Linfeng_20120125_PCAF_3.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.10 0.00 0 9 25 2 497.25217 993.49706 -2.98 23.41 2500 2500 MS2 13/14 Linfeng_091311_rIgG_7.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.09 0.00 0 23 100 2 583.29993 1165.59258 6.66 23.70 1697 1697 MS2 13/16 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 358 2.09 0.00 1 6 100 2 617.84680 1234.68633 5.88 22.61 1541 1541 MS2 13/18 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.08 0.00 0 4 100 2 691.33270 1381.65813 7.17 26.03 2156 2156 MS2 17/22 Linfeng_20120125_PCAF_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 501 2.08 0.00 0 11 100 2 601.31628 1201.62529 6.73 31.88 2808 2808 MS2 18/20 Linfeng_20120125_PCAF_3.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 297 2.08 0.00 0 9 25 2 516.30157 1031.59587 -2.40 31.74 3625 3625 MS2 14/16 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 345 2.08 0.00 0 8 100 2 545.77240 1090.53752 5.96 21.28 1421 1421 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.08 0.00 0 22 100 2 555.25165 1109.49602 5.54 32.96 3268 3268 MS2 14/16 Linfeng_20120125_PCAF_4.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.08 0.00 0 7 9 2 497.25186 993.49645 -3.60 22.68 2166 2166 MS2 13/14 Linfeng_091311_rIgG_1.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.08 0.00 0 14 25 2 497.25223 993.49718 -2.86 23.07 2481 2481 MS2 13/14 Linfeng_091311_rIgG_3.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 470 2.08 0.00 0 3 100 2 601.31665 1201.62602 7.34 32.05 2839 2839 MS2 15/20 Linfeng_20120125_PCAF_3.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 294 2.08 0.00 1 3 25 2 747.36975 1493.73223 -1.42 20.45 2077 2077 MS2 15/22 Linfeng_091311_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.08 0.00 0 9 25 2 601.31006 1201.61284 -3.63 29.61 3344 3344 MS2 17/20 Linfeng_091311_rIgG_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 322 2.08 0.00 1 2 100 2 1106.55725 2212.10723 4.16 47.50 6359 6359 MS2 13/36 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 127 2.07 0.00 0 29 100 2 555.25226 1109.49724 6.64 36.72 3865 3865 MS2 14/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.07 0.00 0 16 100 2 555.25226 1109.49724 6.64 34.78 4405 4405 MS2 13/16 Linfeng_20120125_PCAF_5.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 7 14 2 497.25217 993.49706 -2.98 23.17 2489 2489 MS2 13/14 Linfeng_091311_rIgG_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 362 2.07 0.00 0 25 100 2 695.84949 1390.69170 7.74 31.82 2792 2792 MS2 13/24 Linfeng_20120125_PCAF_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 294 2.07 0.00 0 4 100 2 516.30719 1031.60710 8.48 10.92 750 750 MS2 14/16 Linfeng_20120125_PCAF_2.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 229 2.07 0.00 1 45 100 2 619.30017 1237.59307 6.65 26.16 2282 2282 MS2 14/18 Linfeng_20120125_PCAF_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 2.07 0.00 0 38 25 2 631.80432 1262.60137 3.29 21.33 1790 1790 MS2 16/26 Linfeng_122411_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 117 2.06 0.00 0 24 100 2 555.25275 1109.49822 7.52 35.32 3965 3965 MS2 14/16 Linfeng_20120125_PCAF_6.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 2.06 0.00 1 36 100 2 619.29785 1237.58843 2.90 26.89 2456 2456 MS2 14/18 Linfeng_20120125_PCAF_5.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 2.06 0.00 1 17 25 2 594.35242 1187.69756 -1.61 29.63 3377 3377 MS2 14/18 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.06 0.00 0 43 100 2 555.25269 1109.49809 7.41 35.34 3721 3721 MS2 14/16 Linfeng_20120125_PCAF_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.06 0.00 1 4 100 2 617.84729 1234.68730 6.68 23.48 1860 1860 MS2 13/18 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 104 2.06 0.00 0 6 100 2 555.25220 1109.49712 6.53 1.52 142 142 MS2 10/16 Linfeng_20120125_PCAF_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.06 0.00 1 12 100 2 617.84747 1234.68767 6.97 23.49 1562 1562 MS2 13/18 Linfeng_20120125_PCAF_9.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.06 0.00 0 29 100 2 631.80591 1262.60454 5.80 21.32 1425 1425 MS2 16/26 Linfeng_20120125_PCAF_1.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 2.06 0.00 0 3 13 2 497.25381 993.50035 0.33 4.87 552 552 MS2 13/14 Linfeng_122411_rIgG_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 114 2.06 0.00 0 2 56 2 555.25287 1109.49846 7.74 34.19 3471 3471 MS2 14/16 Linfeng_20120125_PCAF_9.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.05 0.00 1 24 100 2 532.81268 1064.61809 7.68 23.42 1525 1525 MS2 14/16 Linfeng_20120125_PCAF_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 185 2.05 0.00 0 21 100 2 691.33173 1381.65618 5.76 25.44 1900 1900 MS2 16/22 Linfeng_20120125_PCAF_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 453 2.05 0.00 0 16 100 2 601.31702 1201.62676 7.95 31.72 2935 2935 MS2 16/20 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.05 0.00 0 38 100 2 555.25226 1109.49724 6.64 36.56 3828 3828 MS2 12/16 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.05 0.00 1 4 32 2 532.81201 1064.61675 6.42 24.00 1820 1820 MS2 15/16 Linfeng_20120125_PCAF_6.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 2.05 0.00 1 4 25 2 498.26205 995.51683 -2.87 22.86 2485 2485 MS2 11/12 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 266 2.05 0.00 1 9 100 2 532.81177 1064.61626 5.96 23.83 1864 1864 MS2 14/16 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 88 2.04 0.00 0 14 25 2 555.24677 1109.48625 -3.26 33.14 3878 3878 MS2 13/16 Linfeng_091311_rIgG_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 202 2.04 0.00 0 0 100 2 691.33228 1381.65727 6.55 23.02 1726 1726 MS2 14/22 Linfeng_20120125_PCAF_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.04 0.00 0 23 25 2 691.32983 1381.65239 3.02 20.32 1618 1618 MS2 16/22 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.03 0.00 0 2 48 2 555.25226 1109.49724 6.64 34.40 3348 3348 MS2 13/16 Linfeng_20120125_PCAF_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 369 2.03 0.00 1 9 100 2 617.84729 1234.68730 6.68 26.48 2188 2188 MS2 14/18 Linfeng_20120125_PCAF_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 372 2.03 0.00 1 33 100 2 617.84631 1234.68535 5.09 28.29 2692 2692 MS2 14/18 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 131 2.03 0.00 0 16 100 2 555.25250 1109.49773 7.08 34.98 3731 3731 MS2 13/16 Linfeng_20120125_PCAF_4.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 394 2.03 0.00 0 8 14 2 497.25113 993.49498 -5.07 23.33 2464 2464 MS2 13/14 Linfeng_091311_rIgG_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 2.02 0.00 1 15 25 2 594.35211 1187.69695 -2.13 29.60 3380 3380 MS2 15/18 Linfeng_091311_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 308 2.02 0.00 0 4 1 2 516.30194 1031.59661 -1.69 29.83 3010 3010 MS2 15/16 Linfeng_122411_rIgG_5.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 2.02 0.00 1 34 100 2 619.29932 1237.59136 5.26 26.29 2321 2321 MS2 13/18 Linfeng_20120125_PCAF_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 2.02 0.00 0 2 52 2 516.30609 1031.60491 6.35 34.46 3361 3361 MS2 15/16 Linfeng_20120125_PCAF_7.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 2.02 0.00 0 9 100 2 583.30042 1165.59355 7.50 23.56 1689 1689 MS2 15/16 Linfeng_20120125_PCAF_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 2.01 0.00 0 5 12 2 516.30139 1031.59551 -2.76 31.50 3624 3624 MS2 14/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.01 0.00 0 0 100 2 545.77197 1090.53667 5.18 20.83 1549 1549 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 122 2.01 0.00 0 43 100 2 555.25281 1109.49834 7.63 35.48 4076 4076 MS2 13/16 Linfeng_20120125_PCAF_10.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 343 2.01 0.00 1 7 25 2 498.26242 995.51756 -2.14 22.99 2465 2465 MS2 11/12 Linfeng_091311_rIgG_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 2.01 0.00 0 4 3 2 516.30157 1031.59587 -2.40 31.53 3676 3676 MS2 15/16 Linfeng_091311_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.00 0.00 0 8 100 2 691.33209 1381.65691 6.29 25.45 2018 2018 MS2 16/22 Linfeng_20120125_PCAF_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.00 0.00 0 11 25 2 601.31085 1201.61443 -2.31 29.31 3341 3341 MS2 16/20 Linfeng_091311_rIgG_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.00 0.00 0 30 100 2 555.25177 1109.49626 5.76 32.90 3799 3799 MS2 13/16 Linfeng_20120125_PCAF_1.raw IPI00009867.3 "Keratin, type II cytoskeletal 5" 39.83 6 18 30 333 375.75 30.85 20 146 276.06 31.36 20 94 222.70 21.36 11 93 590 62.3 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 184 7.04 0.00 1 9 25 3 806.71362 2418.12632 2.25 33.58 3263 3263 MS2 44/76 Linfeng_122411_rIgG_2.raw High TEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 188 6.08 0.00 1 5 25 3 806.71375 2418.12668 2.40 33.50 3226 3226 MS2 40/76 Linfeng_122411_rIgG_3.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 211 4.19 0.00 2 14 25 4 666.07025 2661.25918 1.93 31.91 3221 3221 MS2 41/126 Linfeng_122411_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 476 4.05 0.00 1 4 25 3 462.59335 1385.76551 1.42 33.22 3218 3218 MS2 25/44 Linfeng_122411_rIgG_2.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 214 4.02 0.00 2 13 25 4 666.07013 2661.25869 1.75 31.64 2985 2985 MS2 39/126 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 482 3.99 0.00 1 12 25 3 462.59344 1385.76578 1.62 33.54 3428 3428 MS2 27/44 Linfeng_122411_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.85 0.00 0 7 25 2 705.84491 1410.68254 2.16 26.46 2503 2503 MS2 22/28 Linfeng_122411_rIgG_6.raw High QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 3.80 0.00 0 25 25 3 567.93799 1701.79941 1.19 31.15 2952 2952 MS2 31/56 Linfeng_122411_rIgG_2.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 213 3.80 0.00 2 6 25 4 666.07019 2661.25893 1.84 31.82 3039 3039 MS2 39/126 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 488 3.61 0.00 1 19 25 3 462.59390 1385.76715 2.61 33.31 2985 2985 MS2 25/44 Linfeng_122411_rIgG_9.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 374 3.60 0.00 0 34 25 2 705.86298 1410.71868 -2.63 28.45 3219 3219 MS2 18/26 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.55 0.00 0 19 25 2 705.84491 1410.68254 2.16 25.05 2258 2258 MS2 21/28 Linfeng_122411_rIgG_4.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 197 3.55 0.00 0 25 25 2 705.84125 1410.67522 -3.03 27.76 2857 2857 MS2 22/28 Linfeng_091311_rIgG_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 3.53 0.00 0 20 25 2 705.84149 1410.67571 -2.69 27.69 3158 3158 MS2 23/28 Linfeng_091311_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 3.52 0.00 0 8 25 2 705.84174 1410.67620 -2.34 27.92 3114 3114 MS2 21/28 Linfeng_091311_rIgG_7.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 488 3.52 0.00 1 4 25 3 462.59360 1385.76624 1.95 33.32 3202 3202 MS2 25/44 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 530 3.40 0.00 1 9 8 3 462.59229 1385.76230 -0.89 3.95 398 398 MS2 26/44 Linfeng_122411_rIgG_7.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 484 3.37 0.00 1 64 100 3 462.59576 1385.77274 6.64 47.91 6971 6971 MS2 25/44 Linfeng_20120125_PCAF_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 3.35 0.00 0 11 25 2 705.84448 1410.68169 1.55 4.75 540 540 MS2 21/28 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 610 3.28 0.00 0 25 25 2 572.31708 1143.62688 1.08 29.44 2727 2727 MS2 16/18 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 3.27 0.00 0 8 25 2 705.84479 1410.68230 1.99 4.66 526 526 MS2 20/28 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 3.24 0.00 0 14 25 2 705.84222 1410.67717 -1.65 27.63 3113 3113 MS2 21/28 Linfeng_091311_rIgG_3.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 388 3.20 0.00 0 28 25 2 705.86633 1410.72539 2.13 25.22 2138 2138 MS2 20/26 Linfeng_122411_rIgG_3.raw High SRTEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 238 3.19 0.00 1 30 25 3 495.90411 1485.69779 0.60 4.66 521 521 MS2 24/44 Linfeng_122411_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 3.15 0.00 0 24 25 2 705.84204 1410.67681 -1.91 27.84 3073 3073 MS2 20/28 Linfeng_091311_rIgG_5.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 42 25 2 572.31775 1143.62822 2.26 28.35 2417 2417 MS2 16/18 Linfeng_122411_rIgG_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 532 3.10 0.00 0 23 25 2 572.31726 1143.62724 1.40 29.52 2707 2707 MS2 16/18 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 377 3.08 0.00 0 7 25 2 705.86646 1410.72563 2.30 24.94 2127 2127 MS2 18/26 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 217 3.07 0.00 0 40 25 2 705.84131 1410.67534 -2.95 27.80 3101 3101 MS2 22/28 Linfeng_091311_rIgG_9.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 3.07 0.00 0 22 100 2 705.84814 1410.68901 6.75 26.24 2201 2201 MS2 22/28 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 371 3.06 0.00 0 12 25 2 705.86243 1410.71758 -3.41 28.40 3255 3255 MS2 21/26 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 181 3.04 0.00 0 6 25 2 851.40442 1701.80156 2.45 31.24 2964 2964 MS2 18/28 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 3.04 0.00 0 49 25 2 705.84607 1410.68486 3.80 20.36 1594 1594 MS2 20/28 Linfeng_122411_rIgG_3.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 336 3.03 0.00 0 6 100 2 720.36469 1439.72209 6.61 26.21 1997 1997 MS2 20/32 Linfeng_20120125_PCAF_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 563 3.03 0.00 0 25 25 2 572.31512 1143.62297 -2.33 30.95 3561 3561 MS2 16/18 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 236 3.01 0.00 0 14 25 2 597.78949 1194.57170 -2.74 20.99 2197 2197 MS2 17/18 Linfeng_091311_rIgG_6.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 529 3.01 0.00 0 39 25 2 572.31421 1143.62114 -3.93 31.20 3522 3522 MS2 16/18 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 508 2.99 0.00 0 17 12 2 572.31445 1143.62163 -3.51 31.04 3612 3612 MS2 16/18 Linfeng_091311_rIgG_2.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 237 2.97 0.00 0 4 12 2 597.78967 1194.57207 -2.44 20.74 2188 2188 MS2 17/18 Linfeng_091311_rIgG_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 226 2.96 0.00 0 26 25 2 597.78857 1194.56987 -4.28 20.87 2135 2135 MS2 17/18 Linfeng_091311_rIgG_5.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 351 2.96 0.00 0 31 25 2 705.86279 1410.71831 -2.89 28.67 3217 3217 MS2 20/26 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 541 2.94 0.00 0 26 98 2 572.31915 1143.63103 4.71 34.17 4109 4109 MS2 16/18 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 2.91 0.00 0 46 25 2 705.84558 1410.68389 3.11 19.34 1502 1502 MS2 18/28 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 244 2.88 0.00 0 11 25 2 597.78973 1194.57219 -2.34 20.72 2159 2159 MS2 17/18 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 241 2.87 0.00 0 24 25 2 597.78961 1194.57195 -2.54 20.76 2155 2155 MS2 17/18 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 370 2.86 0.00 0 34 25 2 705.86591 1410.72453 1.52 27.25 2609 2609 MS2 18/26 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 2.85 0.00 0 19 100 2 705.84625 1410.68523 4.06 26.90 2459 2459 MS2 21/28 Linfeng_20120125_PCAF_5.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 514 2.85 0.00 0 30 25 2 572.31476 1143.62224 -2.97 31.22 3574 3574 MS2 16/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 430 2.81 0.00 0 19 7 2 572.31616 1143.62505 -0.52 3.34 312 312 MS2 16/18 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 266 2.80 0.00 0 17 25 2 597.79083 1194.57439 -0.50 16.99 1428 1428 MS2 17/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 531 2.80 0.00 0 25 100 2 572.31995 1143.63262 6.10 34.32 3581 3581 MS2 16/18 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVKAQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 325 2.77 0.00 1 22 25 3 802.08575 2404.24271 2.98 52.98 5709 5709 MS2 29/80 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 512 2.75 0.00 0 31 25 2 572.31787 1143.62847 2.47 28.32 2331 2331 MS2 16/18 Linfeng_122411_rIgG_9.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 2.75 0.00 0 38 25 2 705.84235 1410.67742 -1.47 27.68 3113 3113 MS2 22/28 Linfeng_091311_rIgG_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 537 2.74 0.00 0 40 80 2 572.31775 1143.62822 2.26 33.81 4165 4165 MS2 16/18 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 521 2.74 0.00 0 47 15 2 572.31451 1143.62175 -3.40 31.10 3307 3307 MS2 16/18 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 2.72 0.00 0 3 100 2 705.84760 1410.68791 5.97 26.36 2015 2015 MS2 19/28 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 238 2.72 0.00 0 13 25 2 597.78931 1194.57134 -3.05 20.99 2168 2168 MS2 16/18 Linfeng_091311_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 252 2.72 0.00 0 58 25 2 705.84546 1410.68364 2.94 21.38 1689 1689 MS2 20/28 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 350 2.69 0.00 0 34 25 2 705.86261 1410.71794 -3.15 28.64 3233 3233 MS2 16/26 Linfeng_091311_rIgG_6.raw High QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 194 2.68 0.00 0 22 100 2 851.40753 1701.80779 6.11 36.22 4606 4606 MS2 15/28 Linfeng_20120125_PCAF_1.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 539 2.68 0.00 0 30 100 2 572.31989 1143.63249 5.99 34.24 3417 3417 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 517 2.67 0.00 0 13 100 2 572.32001 1143.63274 6.21 34.38 3595 3595 MS2 16/18 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 507 2.66 0.00 0 25 25 2 572.31494 1143.62261 -2.65 31.26 3563 3563 MS2 16/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 232 2.65 0.00 0 4 100 2 705.84833 1410.68938 7.01 26.67 2028 2028 MS2 18/28 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.64 0.00 0 32 25 2 705.84613 1410.68498 3.89 26.63 2038 2038 MS2 18/28 Linfeng_122411_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 215 2.64 0.00 0 31 25 2 705.84082 1410.67436 -3.64 27.76 3222 3222 MS2 18/28 Linfeng_091311_rIgG_10.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 261 2.63 0.00 0 12 25 2 547.26581 1093.52434 -2.71 21.54 2298 2298 MS2 14/16 Linfeng_091311_rIgG_2.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 105 2.63 0.00 0 5 25 2 621.78534 1242.56340 -0.27 24.05 2177 2177 MS2 15/18 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 251 2.62 0.00 0 16 25 2 547.26593 1093.52458 -2.49 21.82 2309 2309 MS2 15/16 Linfeng_091311_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 230 2.62 0.00 0 11 100 2 705.84650 1410.68572 4.41 26.62 2388 2388 MS2 19/28 Linfeng_20120125_PCAF_5.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 256 2.61 0.00 0 36 25 2 547.26605 1093.52483 -2.26 21.74 2251 2251 MS2 15/16 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 257 2.60 0.00 0 11 25 2 547.26630 1093.52532 -1.82 21.63 2275 2275 MS2 14/16 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 2.60 0.00 0 19 100 2 705.84833 1410.68938 7.01 26.63 1905 1905 MS2 18/28 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 264 2.59 0.00 0 12 25 2 547.26617 1093.52507 -2.04 21.60 2278 2278 MS2 14/16 Linfeng_091311_rIgG_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 531 2.59 0.00 0 23 100 2 572.32043 1143.63359 6.95 34.36 3509 3509 MS2 16/18 Linfeng_20120125_PCAF_9.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 245 2.59 0.00 0 19 25 2 597.78888 1194.57048 -3.77 21.03 2237 2237 MS2 17/18 Linfeng_091311_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.57 0.00 2 15 100 3 436.89230 1308.66236 6.16 17.30 1300 1300 MS2 19/36 Linfeng_20120125_PCAF_6.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 509 2.55 0.00 0 29 25 2 572.31476 1143.62224 -2.97 31.29 3633 3633 MS2 16/18 Linfeng_091311_rIgG_8.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 333 2.55 0.00 0 4 25 2 720.36133 1439.71538 1.94 26.22 2470 2470 MS2 20/32 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 269 2.54 0.00 0 7 25 2 547.26575 1093.52422 -2.82 21.91 2292 2292 MS2 15/16 Linfeng_091311_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.52 0.00 2 15 100 3 436.89246 1308.66281 6.51 14.25 898 898 MS2 15/36 Linfeng_20120125_PCAF_1.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 271 2.52 0.00 0 31 25 2 597.79077 1194.57427 -0.60 15.98 1334 1334 MS2 16/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 534 2.50 0.00 0 25 100 2 572.32019 1143.63310 6.53 34.30 3330 3330 MS2 16/18 Linfeng_20120125_PCAF_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 197 2.50 0.00 0 55 25 2 597.79022 1194.57317 -1.52 18.05 1542 1542 MS2 17/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 233 2.48 0.00 0 29 25 2 547.26575 1093.52422 -2.82 20.22 1830 1830 MS2 14/16 Linfeng_091311_rIgG_1.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 524 2.48 0.00 0 34 25 2 572.31445 1143.62163 -3.51 31.33 3577 3577 MS2 16/18 Linfeng_091311_rIgG_7.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 384 2.44 0.00 0 11 25 2 705.86298 1410.71868 -2.63 28.41 3219 3219 MS2 17/26 Linfeng_091311_rIgG_3.raw Medium NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 533 2.44 0.00 1 15 25 3 462.59247 1385.76285 -0.50 33.17 3466 3466 MS2 21/44 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 576 2.43 0.00 0 9 30 2 602.32538 1203.64348 5.50 36.11 3772 3772 MS2 16/18 Linfeng_20120125_PCAF_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 201 2.43 0.00 0 7 25 2 597.79022 1194.57317 -1.52 20.92 2145 2145 MS2 17/18 Linfeng_091311_rIgG_9.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 376 2.43 0.00 0 13 100 2 705.87012 1410.73296 7.49 28.89 2640 2640 MS2 18/26 Linfeng_20120125_PCAF_10.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 87 2.43 0.00 0 6 25 2 621.78235 1242.55742 -5.09 25.74 2890 2890 MS2 16/18 Linfeng_091311_rIgG_2.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 277 2.43 0.00 0 21 25 2 547.26459 1093.52190 -4.94 21.85 2351 2351 MS2 13/16 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 342 2.41 0.00 0 31 100 2 705.87000 1410.73271 7.32 29.29 2468 2468 MS2 17/26 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.41 0.00 0 10 100 2 602.32587 1203.64446 6.31 35.41 3646 3646 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 370 2.39 0.00 0 13 100 2 705.86987 1410.73247 7.14 28.62 2581 2581 MS2 15/26 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.39 0.00 0 9 74 2 602.32617 1203.64507 6.82 35.49 3663 3663 MS2 16/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.38 0.00 0 7 63 2 602.32635 1203.64543 7.12 35.74 3710 3710 MS2 16/18 Linfeng_20120125_PCAF_2.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 96 2.38 0.00 0 14 25 2 621.78271 1242.55815 -4.50 26.12 2895 2895 MS2 16/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 91 2.36 0.00 0 7 25 2 621.78271 1242.55815 -4.50 25.78 2858 2858 MS2 16/18 Linfeng_091311_rIgG_3.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 207 2.36 0.00 0 53 25 2 705.84698 1410.68669 5.10 18.32 1420 1420 MS2 16/28 Linfeng_122411_rIgG_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 536 2.35 0.00 0 29 100 2 572.32031 1143.63335 6.74 34.27 3724 3724 MS2 16/18 Linfeng_20120125_PCAF_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 363 2.35 0.00 0 6 100 2 705.87006 1410.73284 7.40 28.95 2650 2650 MS2 13/26 Linfeng_20120125_PCAF_10.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 350 2.34 0.00 0 18 100 2 705.86896 1410.73064 5.85 28.81 2906 2906 MS2 17/26 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 490 2.32 0.00 0 16 100 2 602.32642 1203.64556 7.22 36.25 3926 3926 MS2 16/18 Linfeng_20120125_PCAF_9.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 256 2.32 0.00 0 19 25 2 547.26581 1093.52434 -2.71 21.79 2385 2385 MS2 14/16 Linfeng_091311_rIgG_10.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.32 0.00 0 10 100 2 705.84711 1410.68694 5.28 26.94 2274 2274 MS2 14/28 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.32 0.00 0 10 54 2 602.32581 1203.64433 6.21 36.17 3786 3786 MS2 15/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 93 2.31 0.00 0 8 25 2 621.78278 1242.55828 -4.40 25.85 2861 2861 MS2 16/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 366 2.31 0.00 2 5 8 3 436.88864 1308.65137 -2.24 18.37 1829 1829 MS2 21/36 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 363 2.31 0.00 2 4 3 3 436.88809 1308.64972 -3.50 18.40 1859 1859 MS2 21/36 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 591 2.30 0.00 0 15 100 2 602.32593 1203.64458 6.41 35.32 3627 3627 MS2 16/18 Linfeng_20120125_PCAF_2.raw High SGGGGGGGFGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 156 2.30 0.00 0 48 25 2 433.19818 865.38909 -2.41 14.15 1259 1259 MS2 14/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.28 0.00 0 23 100 2 602.32629 1203.64531 7.02 35.77 4074 4074 MS2 15/18 Linfeng_20120125_PCAF_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 361 2.27 0.00 2 6 17 3 436.88849 1308.65091 -2.59 18.41 1822 1822 MS2 21/36 Linfeng_091311_rIgG_4.raw Medium LRAEIDNVKK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 420 2.27 0.00 2 29 25 3 395.90201 1185.69147 -3.03 17.43 1720 1720 MS2 18/36 Linfeng_091311_rIgG_2.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 268 2.27 0.00 0 21 25 2 547.26508 1093.52287 -4.05 21.84 2275 2275 MS2 13/16 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.26 0.00 0 9 100 2 602.32574 1203.64421 6.11 35.36 4397 4397 MS2 17/18 Linfeng_20120125_PCAF_1.raw Medium QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 2.26 0.00 0 20 25 3 567.93762 1701.79831 0.55 31.21 2929 2929 MS2 24/56 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 509 2.25 0.00 0 27 98 2 602.32623 1203.64519 6.92 35.70 4056 4056 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.25 0.00 2 5 16 3 436.88831 1308.65036 -3.01 18.60 1866 1866 MS2 21/36 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 249 2.24 0.00 0 25 100 2 705.84869 1410.69011 7.53 26.03 2157 2157 MS2 20/28 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 360 2.23 0.00 0 20 100 2 705.86969 1410.73210 6.88 28.67 2414 2414 MS2 19/26 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.22 0.00 0 8 44 2 602.32581 1203.64433 6.21 35.99 3756 3756 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.21 0.00 0 7 88 2 602.32623 1203.64519 6.92 35.44 3653 3653 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 527 2.21 0.00 0 30 100 2 572.31976 1143.63225 5.78 34.20 4244 4244 MS2 16/18 Linfeng_20120125_PCAF_8.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 95 2.21 0.00 0 7 25 2 621.78241 1242.55754 -4.99 25.61 2562 2562 MS2 16/18 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High TEEREQIK Unambiguous 4 1 IPI00009867.3 CID 1.0000 0.0000 1 1 548 2.20 0.00 1 29 25 2 516.77020 1032.53313 1.03 3.12 282 282 MS2 8/14 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.18 0.00 0 14 100 2 602.32562 1203.64397 5.90 35.45 4419 4419 MS2 15/18 Linfeng_20120125_PCAF_1.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 324 2.18 0.00 0 21 25 2 720.36322 1439.71916 4.57 26.59 2105 2105 MS2 15/32 Linfeng_122411_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.18 0.00 0 13 100 2 602.32605 1203.64482 6.61 35.36 3636 3636 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.17 0.00 0 11 73 2 602.32593 1203.64458 6.41 36.29 3807 3807 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 2.17 0.00 0 25 100 2 602.32654 1203.64580 7.43 35.70 3638 3638 MS2 13/18 Linfeng_20120125_PCAF_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 322 2.17 0.00 0 7 25 2 556.29205 1111.57683 2.31 23.24 1919 1919 MS2 17/20 Linfeng_122411_rIgG_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 287 2.16 0.00 0 17 25 2 556.28943 1111.57158 -2.41 27.76 3130 3130 MS2 17/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 515 2.14 0.00 0 19 100 2 602.32623 1203.64519 6.92 35.15 3593 3593 MS2 17/18 Linfeng_20120125_PCAF_2.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 355 2.14 0.00 0 33 100 2 705.86920 1410.73113 6.19 28.59 2857 2857 MS2 12/26 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.14 0.00 0 13 96 2 602.32574 1203.64421 6.11 36.36 3821 3821 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 593 2.14 0.00 0 13 100 2 602.32593 1203.64458 6.41 35.18 4354 4354 MS2 17/18 Linfeng_20120125_PCAF_1.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 307 2.13 0.00 0 33 25 2 556.29205 1111.57683 2.31 26.78 2055 2055 MS2 15/20 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 524 2.13 0.00 0 23 100 2 572.32025 1143.63323 6.63 34.39 3812 3812 MS2 16/18 Linfeng_20120125_PCAF_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 317 2.12 0.00 0 20 100 2 705.86896 1410.73064 5.85 28.76 2263 2263 MS2 15/26 Linfeng_20120125_PCAF_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 589 2.12 0.00 0 10 64 2 602.32581 1203.64433 6.21 36.23 3797 3797 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 372 2.12 0.00 0 21 100 2 705.86945 1410.73161 6.54 28.77 2427 2427 MS2 13/26 Linfeng_20120125_PCAF_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 588 2.11 0.00 0 16 100 2 602.32599 1203.64470 6.51 35.22 3607 3607 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 315 2.10 0.00 0 11 25 2 556.29169 1111.57610 1.65 26.48 2505 2505 MS2 17/20 Linfeng_122411_rIgG_6.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 312 2.10 0.00 0 11 25 2 556.29236 1111.57744 2.86 24.12 1996 1996 MS2 18/20 Linfeng_122411_rIgG_3.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 342 2.10 0.00 0 17 100 2 705.87024 1410.73320 7.66 28.64 2409 2409 MS2 15/26 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 249 2.09 0.00 0 33 100 2 705.84802 1410.68877 6.57 27.05 2310 2310 MS2 15/28 Linfeng_20120125_PCAF_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 540 2.07 0.00 0 20 100 2 572.32037 1143.63347 6.85 34.58 3387 3387 MS2 15/18 Linfeng_20120125_PCAF_7.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 313 2.07 0.00 0 42 25 2 556.29187 1111.57646 1.98 23.10 1875 1875 MS2 16/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 574 2.06 0.00 0 22 100 2 602.32587 1203.64446 6.31 36.09 3890 3890 MS2 14/18 Linfeng_20120125_PCAF_9.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 90 2.05 0.00 0 33 25 2 621.78247 1242.55766 -4.89 26.17 2874 2874 MS2 15/18 Linfeng_091311_rIgG_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.05 0.00 0 30 100 2 602.32581 1203.64433 6.21 35.02 3567 3567 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 315 2.03 0.00 0 7 25 2 556.28925 1111.57121 -2.74 28.04 3132 3132 MS2 17/20 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.02 0.00 0 32 100 2 602.32587 1203.64446 6.31 35.92 3855 3855 MS2 15/18 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 495 2.02 0.00 0 29 100 2 602.32623 1203.64519 6.92 35.99 3868 3868 MS2 16/18 Linfeng_20120125_PCAF_9.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 505 2.02 0.00 0 23 100 2 602.32617 1203.64507 6.82 36.39 3791 3791 MS2 14/18 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High NMQDLVEDFK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 175 2.00 0.00 0 35 100 2 619.79431 1238.58135 7.36 46.18 6359 6359 MS2 16/18 Linfeng_20120125_PCAF_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 304 2.00 0.00 0 15 25 2 556.29163 1111.57598 1.54 25.09 2263 2263 MS2 16/20 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 580 2.00 0.00 0 28 100 2 602.32593 1203.64458 6.41 35.60 4032 4032 MS2 14/18 Linfeng_20120125_PCAF_6.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 358 2.00 0.00 0 14 100 2 705.86993 1410.73259 7.23 29.28 2388 2388 MS2 15/26 Linfeng_20120125_PCAF_7.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00010105.1 Eukaryotic translation initiation factor 6 31.02 1 3 3 3 13.23 31.02 3 3 245 26.6 4.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LSALGNVTTcNDYVALVHPDLDRETEEILADVLK Unambiguous 1 1 IPI00010105.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 185 4.89 0.00 1 56 25 4 946.73096 3783.90200 -2.41 50.58 6126 6126 MS2 45/198 Linfeng_091311_rIgG_8.raw High TSIEDQDELSSLLQVPLVAGTVNR Unambiguous 1 1 IPI00010105.1 CID 1.0000 0.0000 1 1 263 4.17 0.00 0 24 25 3 862.11853 2584.34104 -2.14 48.34 5840 5840 MS2 36/92 Linfeng_091311_rIgG_8.raw High HGLLVPNNTTDQELQHIR Unambiguous 1 1 IPI00010105.1 CID 1.0000 0.0000 1 1 384 4.16 0.00 0 22 25 3 695.69714 2085.07688 -3.25 29.20 3353 3353 MS2 32/68 Linfeng_091311_rIgG_8.raw IPI00011268.2 "cDNA FLJ77422, highly similar to Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (Fragment)" 59.93 6 15 15 48 47.24 37.79 11 19 33.13 48.21 11 11 42.88 20.52 6 18 307 32.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SNIDALLSRLEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 327 3.92 0.00 1 42 25 3 667.03363 1999.08634 2.20 46.36 5038 5038 MS2 29/68 Linfeng_122411_rIgG_6.raw High SSELQAIKTELTQIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 225 3.90 0.00 1 37 25 3 563.65338 1688.94559 1.56 36.22 3763 3763 MS2 32/56 Linfeng_122411_rIgG_6.raw High KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR Unambiguous 1 1 IPI00011268.2 CID 1.0000 0.0000 1 1 32 3.85 0.00 1 0 25 4 1067.48218 4266.90688 2.13 20.31 1700 1700 MS2 46/306 Linfeng_122411_rIgG_6.raw High VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 280 3.63 0.00 0 18 25 4 563.30383 2250.19350 1.02 28.18 2733 2733 MS2 43/120 Linfeng_122411_rIgG_6.raw High VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 240 3.57 0.00 0 18 100 4 563.30737 2250.20766 7.31 36.28 4192 4192 MS2 43/120 Linfeng_20120125_PCAF_6.raw High AASAIYSGYIFDYDYYR Unambiguous 2 1 IPI00011268.2 CID 1.0000 0.0000 1 1 74 3.30 0.00 0 13 25 2 1019.46295 2037.91863 -2.10 42.38 4987 4987 MS2 21/32 Linfeng_091311_rIgG_7.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 360 2.95 0.00 1 48 25 2 577.30963 1153.61199 1.74 25.54 2380 2380 MS2 16/18 Linfeng_122411_rIgG_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 719 2.82 0.00 0 16 25 2 494.77353 988.53978 -2.48 32.11 3691 3691 MS2 15/16 Linfeng_091311_rIgG_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 182 2.80 0.00 0 7 25 2 667.31360 1333.61992 2.06 28.48 2772 2772 MS2 15/20 Linfeng_122411_rIgG_6.raw Medium VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 292 2.80 0.00 0 7 25 4 563.30170 2250.18496 -2.78 29.37 3313 3313 MS2 44/120 Linfeng_091311_rIgG_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 694 2.79 0.00 0 32 25 2 494.77548 988.54369 1.47 30.76 3072 3072 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 261 2.73 0.00 0 75 100 3 750.74017 2250.20597 6.56 35.83 4088 4088 MS2 24/80 Linfeng_20120125_PCAF_6.raw High SSELQAIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 589 2.70 0.00 0 16 25 2 438.24429 875.48131 -2.29 21.88 2316 2316 MS2 13/14 Linfeng_091311_rIgG_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 646 2.67 0.00 0 11 25 2 494.77335 988.53942 -2.85 32.18 3690 3690 MS2 15/16 Linfeng_091311_rIgG_7.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 329 2.66 0.00 1 38 25 2 577.30676 1153.60625 -3.24 27.25 3044 3044 MS2 14/18 Linfeng_091311_rIgG_6.raw High SSELQAIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 590 2.65 0.00 0 24 25 2 438.24387 875.48046 -3.26 21.90 2291 2291 MS2 13/14 Linfeng_091311_rIgG_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 669 2.63 0.00 0 12 100 2 494.77829 988.54930 7.15 35.78 4075 4075 MS2 14/16 Linfeng_20120125_PCAF_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 169 2.60 0.00 0 15 25 2 667.31091 1333.61455 -1.97 29.70 3373 3373 MS2 15/20 Linfeng_091311_rIgG_6.raw Medium VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 246 2.55 0.00 0 16 100 4 563.30707 2250.20644 6.77 36.22 4179 4179 MS2 41/120 Linfeng_20120125_PCAF_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 151 2.51 0.00 0 12 25 2 644.88568 1288.76409 1.30 35.24 3641 3641 MS2 18/22 Linfeng_122411_rIgG_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 358 2.51 0.00 1 16 100 2 577.31293 1153.61858 7.45 25.56 2037 2037 MS2 15/18 Linfeng_20120125_PCAF_6.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 337 2.49 0.00 0 14 25 2 513.25903 1025.51079 -4.12 31.31 3586 3586 MS2 14/16 Linfeng_091311_rIgG_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 148 2.47 0.00 0 10 25 2 667.31055 1333.61382 -2.52 29.70 3357 3357 MS2 15/20 Linfeng_091311_rIgG_7.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 338 2.40 0.00 0 21 25 2 513.25916 1025.51103 -3.88 31.36 3581 3581 MS2 15/16 Linfeng_091311_rIgG_7.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 372 2.39 0.00 1 16 100 2 577.31268 1153.61809 7.03 25.48 2023 2023 MS2 15/18 Linfeng_20120125_PCAF_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 334 2.37 0.00 1 15 25 2 577.30688 1153.60649 -3.02 27.25 3022 3022 MS2 15/18 Linfeng_091311_rIgG_7.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 366 2.37 0.00 0 6 9 2 515.28241 1029.55754 -0.01 3.64 371 371 MS2 15/16 Linfeng_122411_rIgG_6.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 320 2.36 0.00 0 6 25 2 513.26172 1025.51616 1.12 29.86 2954 2954 MS2 15/16 Linfeng_122411_rIgG_6.raw High LQASNVTNK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 1 527 2.36 0.00 0 12 25 2 487.76642 974.52556 -1.04 16.00 1505 1505 MS2 15/16 Linfeng_091311_rIgG_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 384 2.33 0.00 1 18 100 2 577.31201 1153.61675 5.86 26.83 2255 2255 MS2 14/18 Linfeng_20120125_PCAF_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 355 2.32 0.00 1 7 100 2 577.31244 1153.61760 6.61 26.60 2210 2210 MS2 14/18 Linfeng_20120125_PCAF_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 354 2.32 0.00 1 14 100 2 577.31268 1153.61809 7.03 26.34 2164 2164 MS2 15/18 Linfeng_20120125_PCAF_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 213 2.28 0.00 0 12 100 2 667.31702 1333.62676 7.19 30.18 2848 2848 MS2 15/20 Linfeng_20120125_PCAF_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 201 2.28 0.00 0 15 100 2 667.31708 1333.62688 7.28 31.21 3046 3046 MS2 15/20 Linfeng_20120125_PCAF_6.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 341 2.22 0.00 0 8 25 2 515.28113 1029.55498 -2.50 19.86 2012 2012 MS2 15/16 Linfeng_091311_rIgG_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 677 2.21 0.00 0 47 100 2 494.77805 988.54881 6.66 34.74 3832 3832 MS2 13/16 Linfeng_20120125_PCAF_6.raw High STAVTTSSAK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 271 2.21 0.00 0 16 25 2 476.75067 952.49407 -0.56 5.36 460 460 MS2 13/18 Linfeng_091311_rIgG_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 345 2.20 0.00 1 15 100 2 577.31158 1153.61589 5.12 26.38 2168 2168 MS2 15/18 Linfeng_20120125_PCAF_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 367 2.18 0.00 1 21 100 2 577.31256 1153.61785 6.82 25.43 2016 2016 MS2 14/18 Linfeng_20120125_PCAF_6.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 4 25 2 515.28125 1029.55522 -2.26 19.89 2045 2045 MS2 15/16 Linfeng_091311_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 180 2.16 0.00 0 24 25 2 644.88348 1288.75969 -2.11 36.32 4234 4234 MS2 17/22 Linfeng_091311_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 131 2.15 0.00 0 16 92 2 644.88934 1288.77141 6.98 45.30 6339 6339 MS2 18/22 Linfeng_20120125_PCAF_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 178 2.14 0.00 0 5 22 2 644.88306 1288.75884 -2.77 36.36 4227 4227 MS2 18/22 Linfeng_091311_rIgG_7.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 205 2.13 0.00 0 25 100 2 667.31708 1333.62688 7.28 31.39 3084 3084 MS2 14/20 Linfeng_20120125_PCAF_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 354 2.09 0.00 1 14 100 2 577.31250 1153.61772 6.71 25.51 2029 2029 MS2 15/18 Linfeng_20120125_PCAF_6.raw High AAVLGENGR Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 291 2.05 0.00 0 9 9 2 443.74124 886.47521 1.18 3.38 332 332 MS2 15/16 Linfeng_122411_rIgG_6.raw High STAVTTSSAK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 228 2.03 0.00 0 5 25 2 476.74985 952.49242 -2.29 2.63 241 241 MS2 14/18 Linfeng_091311_rIgG_7.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 323 2.02 0.00 0 32 100 2 513.26471 1025.52214 6.95 31.22 3050 3050 MS2 14/16 Linfeng_20120125_PCAF_6.raw IPI00011913.1 Heterogeneous nuclear ribonucleoprotein A0 20.98 1 4 4 4 12.38 20.98 4 4 305 30.8 9.29 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LFIGGLNVQTSESGLR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 336 4.01 0.00 0 5 25 2 845.95776 1690.90825 -2.42 38.43 4488 4488 MS2 26/30 Linfeng_091311_rIgG_7.raw High GDVAEGDLIEHFSQFGTVEK Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 244 3.47 0.00 0 9 25 3 726.68231 2178.03238 -1.23 39.82 4664 4664 MS2 35/76 Linfeng_091311_rIgG_7.raw High SGGGGGGGGSSWGGR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 58 2.80 0.00 0 15 25 2 596.75751 1192.50774 -1.12 17.06 1618 1618 MS2 22/28 Linfeng_091311_rIgG_7.raw High EDIYSGGGGGGSR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 66 2.10 0.00 0 36 25 2 606.26733 1211.52739 -1.15 19.29 1930 1930 MS2 21/24 Linfeng_091311_rIgG_7.raw IPI00012074.3 Isoform 1 of Heterogeneous nuclear ribonucleoprotein R 38.55 4 2 24 72 86.64 31.44 18 32 75.16 30.33 17 25 40.41 12.80 7 15 633 70.9 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 333 4.48 0.00 1 0 25 3 879.11920 2635.34305 1.02 33.88 3418 3418 MS2 42/100 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 321 4.43 0.00 1 5 21 3 879.11639 2635.33463 -2.18 34.89 4066 4066 MS2 38/100 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 477 4.41 0.00 0 2 25 3 487.59863 1460.78135 -2.04 42.64 5052 5052 MS2 30/48 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 487 4.21 0.00 0 3 25 3 487.60062 1460.78730 2.03 41.48 4373 4373 MS2 28/48 Linfeng_122411_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 434 3.92 0.00 0 5 25 2 730.89764 1460.78801 2.52 41.60 4434 4434 MS2 21/24 Linfeng_122411_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 442 3.88 0.00 0 3 19 2 730.89813 1460.78899 3.19 41.38 4360 4360 MS2 21/24 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 3.70 0.00 0 16 100 3 836.42529 2507.26133 6.36 45.58 6212 6212 MS2 34/96 Linfeng_20120125_PCAF_4.raw High AIDALREFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 320 3.62 0.00 1 13 25 3 793.41888 2378.24210 2.91 45.13 4835 4835 MS2 28/80 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 330 3.60 0.00 0 18 100 3 836.42572 2507.26261 6.87 45.44 6178 6178 MS2 33/96 Linfeng_20120125_PCAF_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 262 3.52 0.00 0 6 25 2 805.40656 1609.80583 3.84 45.06 4873 4873 MS2 20/24 Linfeng_122411_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 298 3.51 0.00 0 21 25 3 836.42126 2507.24924 1.54 37.04 3817 3817 MS2 34/96 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 325 3.48 0.00 0 7 100 3 836.42548 2507.26187 6.57 45.83 6273 6273 MS2 33/96 Linfeng_20120125_PCAF_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 344 3.40 0.00 0 32 25 2 869.93854 1738.86980 2.92 43.10 4576 4576 MS2 20/28 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 350 3.34 0.00 0 18 25 3 580.29474 1738.86966 2.84 43.06 4572 4572 MS2 31/56 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 316 3.17 0.00 0 23 100 3 836.42517 2507.26096 6.21 45.86 5969 5969 MS2 26/96 Linfeng_20120125_PCAF_3.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 482 3.16 0.00 0 6 25 2 730.89484 1460.78240 -1.32 42.76 5043 5043 MS2 21/24 Linfeng_091311_rIgG_6.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 229 3.15 0.00 0 21 25 2 805.40265 1609.79802 -1.01 46.11 5462 5462 MS2 20/24 Linfeng_091311_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 432 3.11 0.00 0 11 25 2 730.89441 1460.78154 -1.91 42.52 5036 5036 MS2 21/24 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 260 3.10 0.00 0 3 25 2 805.40582 1609.80437 2.93 44.81 4794 4794 MS2 20/24 Linfeng_122411_rIgG_4.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 349 3.07 0.00 1 16 25 3 513.92316 1539.75492 -2.72 30.41 3483 3483 MS2 26/44 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 3.02 0.00 0 6 21 2 582.28241 1163.55754 1.81 35.39 3607 3607 MS2 15/18 Linfeng_122411_rIgG_4.raw Medium VTEGLVDVILYHQPDDKKK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 281 3.00 0.00 2 4 25 5 440.24393 2197.19053 1.88 33.16 3326 3326 MS2 42/144 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 3.00 0.00 0 32 25 2 869.93451 1738.86174 -1.71 44.33 5264 5264 MS2 19/28 Linfeng_091311_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 2.94 0.00 0 25 100 3 836.42560 2507.26224 6.72 45.72 5935 5935 MS2 29/96 Linfeng_20120125_PCAF_3.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 23 25 2 535.31720 1069.62712 1.76 26.39 2438 2438 MS2 16/18 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 13 15 2 805.40234 1609.79741 -1.39 46.04 5479 5479 MS2 20/24 Linfeng_091311_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 334 2.91 0.00 0 19 25 3 580.29218 1738.86197 -1.58 44.35 5266 5266 MS2 32/56 Linfeng_091311_rIgG_4.raw High VTEGLVDVILYHQPDDK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 408 2.85 0.00 0 1 25 3 647.67145 1940.99979 1.71 38.40 3988 3988 MS2 27/64 Linfeng_122411_rIgG_4.raw High VTEGLVDVILYHQPDDK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 400 2.84 0.00 0 6 22 3 647.66791 1940.98917 -3.76 39.31 4631 4631 MS2 33/64 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 88 2.78 0.00 0 8 100 2 879.89703 1758.78679 6.23 29.02 2309 2309 MS2 15/26 Linfeng_20120125_PCAF_3.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.75 0.00 1 9 14 4 385.69418 1539.75490 -2.73 30.39 3481 3481 MS2 29/66 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 431 2.71 0.00 1 8 25 3 430.21945 1288.64380 4.50 2.91 277 277 MS2 23/44 Linfeng_122411_rIgG_4.raw High ESDLSHVQNK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.70 0.00 0 21 25 2 578.78235 1156.55742 -1.65 14.89 1324 1324 MS2 13/18 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 456 2.68 0.00 0 10 25 2 730.89496 1460.78264 -1.16 42.56 5046 5046 MS2 19/24 Linfeng_091311_rIgG_3.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.68 0.00 0 6 24 2 582.28015 1163.55303 -2.07 36.47 4271 4271 MS2 15/18 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 313 2.65 0.00 0 11 25 3 580.29211 1738.86179 -1.69 44.44 5252 5252 MS2 25/56 Linfeng_091311_rIgG_6.raw Medium VTEGLVDVILYHQPDDKKK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 281 2.64 0.00 2 23 25 4 550.05316 2197.19082 2.01 33.14 3323 3323 MS2 34/108 Linfeng_122411_rIgG_4.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 220 2.60 0.00 1 32 25 3 408.19482 1222.56992 0.01 11.94 976 976 MS2 19/40 Linfeng_091311_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 2.59 0.00 0 33 25 3 836.41833 2507.24045 -1.97 38.14 4484 4484 MS2 27/96 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 309 2.57 0.00 0 7 25 3 537.27313 1609.80484 3.23 44.89 4805 4805 MS2 32/48 Linfeng_122411_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 422 2.56 0.00 1 7 25 3 446.56873 1337.69162 -2.36 31.81 3665 3665 MS2 22/40 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 250 2.43 0.00 0 48 25 2 805.40332 1609.79936 -0.18 45.94 5470 5470 MS2 18/24 Linfeng_091311_rIgG_3.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 2.41 0.00 1 36 100 2 770.38861 1539.76995 7.04 42.60 5490 5490 MS2 16/22 Linfeng_20120125_PCAF_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.40 0.00 0 11 25 2 805.40601 1609.80474 3.16 44.94 4697 4697 MS2 16/24 Linfeng_122411_rIgG_3.raw High GFcFLEYEDHK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.39 0.00 0 30 100 2 722.81793 1444.62859 5.79 44.07 5848 5848 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 481 2.39 0.00 1 16 25 3 446.57065 1337.69739 1.95 30.41 2969 2969 MS2 21/40 Linfeng_122411_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 106 2.39 0.00 0 10 100 2 879.89746 1758.78765 6.71 28.67 2413 2413 MS2 15/26 Linfeng_20120125_PCAF_4.raw Medium HLGVcISVANNR Unambiguous 13 4 IPI00402182.2;IPI00402184.4;IPI00012074.3;IPI00644055.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 2 356 2.38 0.00 0 30 9 3 447.23425 1339.68821 -1.33 4.18 475 475 MS2 23/44 Linfeng_122411_rIgG_4.raw High ADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 68 2.38 0.00 0 16 25 2 547.74078 1094.47429 -0.59 13.98 1197 1197 MS2 14/18 Linfeng_091311_rIgG_4.raw High DYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 119 2.36 0.00 0 14 100 2 649.79834 1298.58940 7.19 40.49 4996 4996 MS2 13/18 Linfeng_20120125_PCAF_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 162 2.36 0.00 0 35 25 2 535.31470 1069.62212 -2.92 28.59 3238 3238 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 175 2.35 0.00 0 36 25 2 535.31482 1069.62236 -2.69 28.83 3258 3258 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 324 2.34 0.00 1 23 100 3 513.92853 1539.77103 7.74 42.33 5110 5110 MS2 21/44 Linfeng_20120125_PCAF_3.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 420 2.33 0.00 1 9 100 2 669.35663 1337.70598 8.37 41.88 5006 5006 MS2 15/20 Linfeng_20120125_PCAF_3.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.31 0.00 1 24 100 3 513.92810 1539.76975 6.91 42.43 5451 5451 MS2 22/44 Linfeng_20120125_PCAF_4.raw Medium KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 228 2.29 0.00 1 14 25 3 408.19653 1222.57505 4.21 3.06 298 298 MS2 17/40 Linfeng_122411_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High DYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 117 2.15 0.00 0 11 100 2 649.79846 1298.58965 7.37 40.43 4983 4983 MS2 14/18 Linfeng_20120125_PCAF_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 315 2.14 0.00 1 12 25 2 644.82178 1288.63628 -1.34 2.91 271 271 MS2 12/22 Linfeng_091311_rIgG_4.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.09 0.00 1 15 25 2 611.78748 1222.56767 -1.82 2.85 262 262 MS2 15/20 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 251 2.04 0.00 0 26 100 2 464.25940 927.51152 7.32 43.12 5615 5615 MS2 12/14 Linfeng_20120125_PCAF_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 83 2.04 0.00 0 7 25 2 879.89374 1758.78020 2.48 25.15 2271 2271 MS2 14/26 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 266 2.03 0.00 0 34 25 2 805.40240 1609.79753 -1.32 46.19 5465 5465 MS2 17/24 Linfeng_091311_rIgG_7.raw High LcDSYEIRPGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.02 0.00 0 27 25 2 669.32794 1337.64861 -2.44 23.40 2522 2522 MS2 15/20 Linfeng_091311_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 458 2.01 0.00 1 18 25 2 669.35229 1337.69731 1.89 30.55 2987 2987 MS2 15/20 Linfeng_122411_rIgG_4.raw High LFVGSIPK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00012149.1 U3 small nucleolar ribonucleoprotein protein MPP10 13.51 2 6 6 6 19.89 13.51 6 6 681 78.8 4.86 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RPENSLLEETLHFDHAVR Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 349 4.34 0.00 0 24 25 4 541.52740 2163.08779 -2.98 33.59 3906 3906 MS2 36/102 Linfeng_091311_rIgG_3.raw High KPWQLQGEVTAQK Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 425 3.51 0.00 0 22 25 3 504.94144 1512.80976 -4.77 25.77 2857 2857 MS2 28/48 Linfeng_091311_rIgG_3.raw High IRDQAWDDVVR Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 353 3.35 0.00 1 48 25 3 458.23575 1372.69269 -3.04 28.13 3180 3180 MS2 24/40 Linfeng_091311_rIgG_3.raw High ATGRPEcFLTIQEGLASK Unambiguous 1 1 IPI00012149.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 3.21 0.00 0 8 25 3 660.00507 1978.00064 -2.88 33.48 3892 3892 MS2 31/68 Linfeng_091311_rIgG_3.raw High LSLAEIYEQEYIK Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 322 2.98 0.00 0 9 25 2 799.91724 1598.82720 -2.54 40.93 4841 4841 MS2 19/24 Linfeng_091311_rIgG_3.raw Medium LDALSNFHFIPKPPVPEIK Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 193 2.51 0.00 0 2 23 4 541.30463 2162.19668 -1.97 39.02 4602 4602 MS2 34/108 Linfeng_091311_rIgG_3.raw IPI00013174.2 Isoform 1 of RNA-binding protein 14 17.64 2 10 10 17 23.95 13.15 7 8 28.08 14.05 7 9 0.00 669 69.4 9.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 244 4.58 0.00 0 4 25 3 822.39612 2465.17380 -2.70 27.02 3023 3023 MS2 34/92 Linfeng_091311_rIgG_4.raw High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 254 4.41 0.00 0 6 13 3 822.39691 2465.17618 -1.74 4.35 502 502 MS2 33/92 Linfeng_122411_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 4.24 0.00 0 8 25 2 876.43921 1751.87114 -1.96 31.48 3621 3621 MS2 27/30 Linfeng_091311_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 351 4.24 0.00 0 5 25 2 876.44257 1751.87786 1.87 30.24 2947 2947 MS2 25/30 Linfeng_122411_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.97 0.00 0 12 25 3 584.63055 1751.87711 1.45 30.19 2941 2941 MS2 34/60 Linfeng_122411_rIgG_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 445 3.56 0.00 0 19 25 3 536.95203 1608.84153 2.14 28.55 2724 2724 MS2 36/56 Linfeng_122411_rIgG_4.raw High KGPGLAVQSGDK Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 320 3.33 0.00 1 52 25 3 386.21494 1156.63025 -1.62 16.83 1599 1599 MS2 23/44 Linfeng_091311_rIgG_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 371 2.80 0.00 0 6 25 2 804.92487 1608.84245 2.72 28.54 2723 2723 MS2 21/28 Linfeng_122411_rIgG_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 294 2.54 0.00 0 27 25 2 533.77881 1066.55034 -2.30 29.01 3294 3294 MS2 15/16 Linfeng_091311_rIgG_4.raw Medium ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 469 2.42 0.00 0 22 25 3 536.94855 1608.83109 -4.35 30.25 3461 3461 MS2 28/56 Linfeng_091311_rIgG_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 353 2.40 0.00 0 54 25 2 533.78131 1066.55535 2.39 27.02 2520 2520 MS2 15/16 Linfeng_122411_rIgG_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 419 2.38 0.00 0 17 25 2 804.92139 1608.83550 -1.61 30.17 3450 3450 MS2 20/28 Linfeng_091311_rIgG_4.raw High YSGSYNDYLR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 128 2.37 0.00 0 12 25 2 619.27954 1237.55181 2.75 26.50 2451 2451 MS2 17/18 Linfeng_122411_rIgG_4.raw High GPGLAVQSGDK Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 308 2.36 0.00 0 26 25 2 514.77075 1028.53423 -2.85 19.75 2011 2011 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQPSASLGVGYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 463 2.30 0.00 0 22 7 2 603.31665 1205.62602 -1.11 4.17 474 474 MS2 18/22 Linfeng_122411_rIgG_4.raw High AQPSVSLGAAYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 471 2.10 0.00 0 34 25 2 610.32300 1219.63872 -3.52 27.25 3054 3054 MS2 15/22 Linfeng_091311_rIgG_4.raw High LAELSDYR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 380 2.03 0.00 0 44 25 2 483.74927 966.49126 2.21 21.76 1842 1842 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00013296.3 40S ribosomal protein S18 31.58 3 5 5 8 19.83 31.58 5 8 152 17.7 10.99 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YSQVLANGLDNK Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 352 3.21 0.00 0 51 25 2 661.33899 1321.67070 -3.03 27.08 3127 3127 MS2 18/22 Linfeng_091311_rIgG_10.raw High YSQVLANGLDNK Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 349 2.71 0.00 0 26 25 2 661.33929 1321.67131 -2.56 27.03 3120 3120 MS2 18/22 Linfeng_091311_rIgG_10.raw High AGELTEDEVER Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 153 2.66 0.00 0 30 25 2 624.28772 1247.56816 -5.54 22.66 2508 2508 MS2 16/20 Linfeng_091311_rIgG_10.raw High KADIDLTK Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 522 2.56 0.00 1 10 25 2 452.26013 903.51299 -1.81 18.80 1959 1959 MS2 13/14 Linfeng_091311_rIgG_10.raw High AGELTEDEVER Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 156 2.38 0.00 0 58 25 2 624.28949 1247.57170 -2.70 22.87 2420 2420 MS2 16/20 Linfeng_091311_rIgG_9.raw High VLNTNIDGR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 536 2.22 0.00 0 45 25 2 501.26971 1001.53215 -5.32 22.61 2501 2501 MS2 14/16 Linfeng_091311_rIgG_10.raw High IPDWFLNR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 603 2.06 0.00 0 5 25 2 530.78113 1060.55498 -2.37 39.17 4738 4738 MS2 13/14 Linfeng_091311_rIgG_10.raw High VLNTNIDGR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 537 2.02 0.00 0 35 25 2 501.27094 1001.53459 -2.88 22.84 2415 2415 MS2 14/16 Linfeng_091311_rIgG_9.raw IPI00013415.1 40S ribosomal protein S7 23.20 1 3 3 3 7.83 23.20 3 3 194 22.1 10.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLTAVHDAILEDLVFPSEIVGK Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 264 3.30 0.00 0 37 25 3 789.76526 2367.28122 0.21 47.34 5608 5608 MS2 30/84 Linfeng_091311_rIgG_9.raw High AIIIFVPVPQLK Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 29 2.32 0.00 0 38 25 2 669.43097 1337.85466 -0.69 45.35 5359 5359 MS2 15/22 Linfeng_091311_rIgG_9.raw High DVNFEFPEFQL Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 165 2.22 0.00 0 46 25 2 692.82623 1384.64519 2.29 53.33 6288 6288 MS2 12/20 Linfeng_091311_rIgG_9.raw IPI00013830.1 SNW domain-containing protein 1 6.72 2 3 3 3 6.48 6.72 3 3 0.00 0.00 536 61.5 9.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YTPSQQGVAFNSGAK Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 257 2.38 0.00 0 6 25 2 777.87921 1554.75115 -2.32 24.50 2676 2676 MS2 22/28 Linfeng_091311_rIgG_4.raw High YTDLVPK Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 277 2.08 0.00 0 30 25 2 418.22974 835.45220 -4.58 24.71 2705 2705 MS2 10/12 Linfeng_091311_rIgG_4.raw High DISEVIALGVPNPR Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 338 2.02 0.00 0 17 25 2 740.41028 1479.81328 -2.28 41.61 4922 4922 MS2 17/26 Linfeng_091311_rIgG_4.raw IPI00013881.6 Heterogeneous nuclear ribonucleoprotein H 19.15 3 4 5 15 17.13 10.47 3 5 35.19 16.26 4 10 449 49.2 6.30 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 319 4.76 0.00 0 8 16 2 998.99146 1996.97563 -0.38 45.11 5092 5092 MS2 22/32 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 357 4.25 0.00 0 2 21 3 666.32965 1996.97440 -1.00 45.05 5084 5084 MS2 31/64 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 297 4.22 0.00 0 29 25 2 998.99023 1996.97319 -1.60 46.37 5483 5483 MS2 21/32 Linfeng_091311_rIgG_5.raw High STGEAFVQFASQEIAEK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 274 3.81 0.00 0 10 13 3 614.63593 1841.89322 0.84 39.33 4318 4318 MS2 38/64 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 345 3.65 0.00 0 18 25 3 666.32959 1996.97422 -1.09 46.30 5486 5486 MS2 27/64 Linfeng_091311_rIgG_6.raw High STGEAFVQFASQEIAEK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 237 3.63 0.00 0 28 25 2 921.44617 1841.88506 -3.59 40.32 4712 4712 MS2 21/32 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 369 3.58 0.00 0 35 25 3 666.33215 1996.98191 2.76 45.23 4330 4330 MS2 25/64 Linfeng_122411_rIgG_7.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 381 3.49 0.00 0 22 25 3 666.33228 1996.98227 2.95 45.17 4483 4483 MS2 24/64 Linfeng_122411_rIgG_9.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 364 3.26 0.00 0 16 25 3 666.33215 1996.98191 2.76 45.20 4890 4890 MS2 28/64 Linfeng_122411_rIgG_6.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 328 3.26 0.00 0 13 25 3 666.32922 1996.97312 -1.64 46.36 5481 5481 MS2 29/64 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 344 3.15 0.00 0 11 25 2 998.99548 1996.98369 3.65 45.17 4886 4886 MS2 20/32 Linfeng_122411_rIgG_6.raw High EGRPSGEAFVELESEDEVK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 221 3.09 0.00 0 21 25 3 702.99854 2106.98105 -0.78 30.52 3104 3104 MS2 27/72 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 360 2.91 0.00 0 16 25 2 998.99481 1996.98235 2.98 45.21 4488 4488 MS2 15/32 Linfeng_122411_rIgG_9.raw High YVELFLNSTAGASGGAYEHR Unambiguous 2 1 IPI00013881.6 CID 1.0000 0.0000 1 1 274 2.87 0.00 0 25 18 3 714.67932 2142.02341 -0.80 33.26 3478 3478 MS2 25/76 Linfeng_122411_rIgG_5.raw High GLPWScSADEVQR Unambiguous 3 1 IPI00013881.6 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 111 2.37 0.00 0 17 25 2 752.84387 1504.68047 -3.00 31.79 3601 3601 MS2 19/24 Linfeng_091311_rIgG_5.raw IPI00013933.2 Isoform DPI of Desmoplakin 5.50 3 11 11 22 0.00 35.69 5.09 10 12 25.30 1.67 3 10 2871 331.6 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLELQGLINDLQR Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 321 4.13 0.00 0 30 25 3 504.95221 1512.84208 2.63 42.80 4429 4429 MS2 26/48 Linfeng_122411_rIgG_2.raw High AQQIHSQTSQQYPLYDLDLGK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 348 3.81 0.00 0 13 25 3 811.74170 2433.21054 2.47 33.09 3201 3201 MS2 30/80 Linfeng_122411_rIgG_2.raw High SAIYQLEEEYENLLK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 369 3.71 0.00 0 23 25 3 614.64557 1841.92215 2.91 45.98 4835 4835 MS2 27/56 Linfeng_122411_rIgG_2.raw High GFFDPNTEENLTYLQLK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 315 3.52 0.00 0 21 25 3 677.00403 2028.99753 3.04 42.34 4371 4371 MS2 23/64 Linfeng_122411_rIgG_2.raw High LLEAQIASGGVVDPVNSVFLPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 166 3.21 0.00 0 18 25 3 751.75684 2253.25595 3.07 42.56 4148 4148 MS2 33/84 Linfeng_122411_rIgG_9.raw High LNDSILQATEQR Unambiguous 2 1 IPI00013933.2 CID 1.0000 0.0000 1 1 469 3.14 0.00 0 5 100 2 694.36737 1387.72746 7.08 33.35 3243 3243 MS2 19/22 Linfeng_20120125_PCAF_2.raw High LNDSILQATEQR Unambiguous 2 1 IPI00013933.2 CID 1.0000 0.0000 1 1 478 3.04 0.00 0 15 100 2 694.36621 1387.72515 5.41 33.54 3279 3279 MS2 17/22 Linfeng_20120125_PCAF_2.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 177 2.86 0.00 0 30 100 2 769.94836 1538.88945 6.84 42.93 5756 5756 MS2 20/28 Linfeng_20120125_PCAF_6.raw High AQQIHSQTSQQYPLYDLDLGK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 317 2.81 0.00 0 21 100 3 811.74463 2433.21933 6.08 42.86 6179 6179 MS2 26/80 Linfeng_20120125_PCAF_1.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 175 2.72 0.00 0 16 25 2 769.94409 1538.88091 1.29 34.73 3409 3409 MS2 20/28 Linfeng_122411_rIgG_2.raw High SVEEVASEIQPFLR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 409 2.67 0.00 0 42 25 2 802.42450 1603.84172 5.63 41.17 3972 3972 MS2 17/26 Linfeng_122411_rIgG_9.raw High QLQNIIQATSR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 463 2.64 0.00 0 10 25 2 636.35828 1271.70928 2.05 27.19 2428 2428 MS2 17/20 Linfeng_122411_rIgG_2.raw High TLELQGLINDLQR Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 309 2.62 0.00 0 38 25 2 756.92419 1512.84111 1.99 42.77 4018 4018 MS2 17/24 Linfeng_122411_rIgG_7.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 163 2.52 0.00 0 34 100 2 769.94989 1538.89250 8.83 43.09 5519 5519 MS2 16/28 Linfeng_20120125_PCAF_9.raw Medium AQQIHSQTSQQYPLYDLDLGK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 323 2.37 0.00 0 21 100 3 811.74438 2433.21860 5.78 42.56 6108 6108 MS2 25/80 Linfeng_20120125_PCAF_1.raw High QLQNIIQATSR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 469 2.28 0.00 0 17 25 2 636.35785 1271.70842 1.38 28.13 2726 2726 MS2 15/20 Linfeng_122411_rIgG_6.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 198 2.27 0.00 0 27 100 2 769.94867 1538.89006 7.24 42.93 5266 5266 MS2 18/28 Linfeng_20120125_PCAF_7.raw High YGDGIQLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 286 2.21 0.00 0 26 25 2 511.76721 1022.52715 0.56 25.10 2321 2321 MS2 15/16 Linfeng_122411_rIgG_6.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 519 2.15 0.00 0 19 25 2 565.31006 1129.61284 2.52 31.36 2730 2730 MS2 15/16 Linfeng_122411_rIgG_9.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 199 2.14 0.00 0 38 100 2 769.94873 1538.89018 7.32 43.02 5275 5275 MS2 16/28 Linfeng_20120125_PCAF_3.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 188 2.12 0.00 0 50 100 2 769.94922 1538.89116 7.95 43.06 5601 5601 MS2 16/28 Linfeng_20120125_PCAF_4.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 182 2.04 0.00 0 34 100 2 769.94574 1538.88420 3.43 43.15 5154 5154 MS2 16/28 Linfeng_20120125_PCAF_2.raw IPI00015953.3 Isoform 1 of Nucleolar RNA helicase 2 37.42 2 21 23 64 97.99 35.50 22 32 51.60 17.88 10 17 41.87 16.99 9 15 783 87.3 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 308 5.94 0.00 0 14 25 2 1054.55981 2108.11235 1.32 48.08 5738 5738 MS2 31/42 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 354 4.92 0.00 0 16 25 3 703.37756 2108.11814 4.06 47.12 4977 4977 MS2 44/84 Linfeng_122411_rIgG_3.raw High LGVcFDVPTASVTEIQEK Unambiguous 2 1 IPI00015953.3 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 280 4.68 0.00 0 3 24 2 996.99725 1992.98723 -3.78 38.43 4527 4527 MS2 25/34 Linfeng_091311_rIgG_3.raw High LSVAcFYGGTPYGGQFER Unambiguous 2 1 IPI00015953.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 136 4.43 0.00 0 12 25 2 1004.96161 2008.91594 -3.14 37.93 4464 4464 MS2 21/34 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 350 4.11 0.00 0 0 68 3 703.37897 2108.12235 6.06 55.35 7779 7779 MS2 41/84 Linfeng_20120125_PCAF_6.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 366 4.10 0.00 0 8 25 3 703.37469 2108.10953 -0.02 47.94 5720 5720 MS2 45/84 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 365 4.01 0.00 0 17 25 3 703.37677 2108.11576 2.93 47.07 5078 5078 MS2 38/84 Linfeng_122411_rIgG_4.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 301 3.99 0.00 0 2 17 2 920.46271 1839.91814 -2.99 36.26 4252 4252 MS2 21/30 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 209 3.98 0.00 1 9 25 3 660.97949 1980.92392 -2.32 32.24 3732 3732 MS2 33/64 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 217 3.86 0.00 1 0 100 2 990.97546 1980.94365 7.64 38.06 4165 4165 MS2 21/32 Linfeng_20120125_PCAF_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 225 3.84 0.00 1 12 25 3 660.98212 1980.93180 1.65 31.43 2958 2958 MS2 32/64 Linfeng_122411_rIgG_3.raw High GLDIPEVDLVIQSSPPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 248 3.70 0.00 0 22 25 2 903.99622 1806.98516 0.17 42.50 5038 5038 MS2 25/32 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 242 3.68 0.00 1 3 100 3 660.98615 1980.94388 7.75 38.25 4204 4204 MS2 33/64 Linfeng_20120125_PCAF_3.raw High DSEDNPQTLLFSATcPHWVFNVAK Unambiguous 2 1 IPI00015953.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 3.65 0.00 0 4 25 3 926.10870 2776.31156 2.85 44.72 4668 4668 MS2 33/92 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 255 3.55 0.00 0 5 25 2 834.90900 1668.81072 -0.54 36.17 3565 3565 MS2 20/28 Linfeng_122411_rIgG_3.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 88 3.26 0.00 1 5 25 3 459.94803 1377.82953 -2.21 28.36 3212 3212 MS2 22/48 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 304 3.25 0.00 0 4 100 2 834.91437 1668.82146 5.89 44.80 5713 5713 MS2 19/28 Linfeng_20120125_PCAF_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 243 3.21 0.00 1 8 100 3 660.98572 1980.94260 7.11 38.06 4164 4164 MS2 29/64 Linfeng_20120125_PCAF_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 364 3.19 0.00 0 9 25 2 626.82635 1252.64543 2.74 28.31 2548 2548 MS2 17/20 Linfeng_122411_rIgG_3.raw High DSEDNPQTLLFSATcPHWVFNVAK Unambiguous 2 1 IPI00015953.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 3.18 0.00 0 19 25 3 926.10645 2776.30478 0.41 45.60 5428 5428 MS2 37/92 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 379 3.15 0.00 0 28 25 3 703.37427 2108.10825 -0.63 48.22 5756 5756 MS2 41/84 Linfeng_091311_rIgG_4.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 70 3.14 0.00 0 8 25 2 582.86005 1164.71282 2.43 30.08 2783 2783 MS2 19/20 Linfeng_122411_rIgG_3.raw High LGVcFDVPTASVTEIQEK Unambiguous 2 1 IPI00015953.3 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 341 3.14 0.00 0 2 21 3 665.00079 1992.98783 -3.48 38.52 4539 4539 MS2 27/68 Linfeng_091311_rIgG_3.raw High GLDIPEVDLVIQSSPPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 319 3.14 0.00 0 7 25 3 602.99927 1806.98325 -0.89 42.47 5035 5035 MS2 30/64 Linfeng_091311_rIgG_3.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 95 3.10 0.00 0 6 8 2 582.85699 1164.70671 -2.81 31.82 3677 3677 MS2 18/20 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 385 3.05 0.00 0 16 25 3 464.90375 1392.69669 -2.79 28.55 3239 3239 MS2 26/40 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 361 3.02 0.00 0 23 25 2 696.85211 1392.69695 -2.61 28.50 3231 3231 MS2 18/20 Linfeng_091311_rIgG_3.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 3.01 0.00 1 34 25 3 459.94998 1377.83539 2.05 25.08 2119 2119 MS2 20/48 Linfeng_122411_rIgG_3.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 68 3.00 0.00 0 50 100 2 582.86285 1164.71843 7.26 36.24 3758 3758 MS2 16/20 Linfeng_20120125_PCAF_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 369 2.99 0.00 0 21 25 2 626.82617 1252.64507 2.45 28.47 2713 2713 MS2 17/20 Linfeng_122411_rIgG_4.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 385 2.98 0.00 0 5 25 2 626.82281 1252.63835 -2.91 29.99 3433 3433 MS2 17/20 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 304 2.88 0.00 0 14 100 2 834.91589 1668.82451 7.72 45.00 6074 6074 MS2 16/28 Linfeng_20120125_PCAF_4.raw High KEAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 463 2.76 0.00 1 12 25 2 723.38245 1445.75762 -1.31 18.36 1827 1827 MS2 17/24 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 290 2.73 0.00 0 29 25 2 834.91187 1668.81645 2.90 36.25 3717 3717 MS2 17/28 Linfeng_122411_rIgG_4.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 103 2.73 0.00 0 46 25 2 582.85663 1164.70598 -3.44 31.85 3671 3671 MS2 16/20 Linfeng_091311_rIgG_4.raw High TFHHVYSGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 450 2.70 0.00 0 22 25 3 359.18256 1075.53312 1.06 11.65 941 941 MS2 16/32 Linfeng_091311_rIgG_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 374 2.64 0.00 0 25 25 2 626.82269 1252.63811 -3.11 30.16 3448 3448 MS2 17/20 Linfeng_091311_rIgG_4.raw High ELKEQLGEEIDSK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 422 2.63 0.00 1 24 25 3 506.59256 1517.76313 -4.15 26.22 2921 2921 MS2 20/48 Linfeng_091311_rIgG_3.raw High NEEPSEEEIDAPKPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 221 2.62 0.00 0 9 25 3 571.27075 1711.79770 -2.62 21.42 2253 2253 MS2 29/56 Linfeng_091311_rIgG_3.raw High KLSVAcFYGGTPYGGQFER Unambiguous 2 1 IPI00015953.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.57 0.00 1 11 24 3 713.00854 2137.01108 -2.87 34.44 4015 4015 MS2 29/72 Linfeng_091311_rIgG_3.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 364 2.54 0.00 0 54 100 2 920.47278 1839.93828 7.96 43.09 5291 5291 MS2 17/30 Linfeng_20120125_PCAF_3.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 2.50 0.00 1 55 25 3 459.95010 1377.83576 2.31 26.00 2386 2386 MS2 19/48 Linfeng_122411_rIgG_4.raw High EAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 405 2.50 0.00 0 3 25 2 659.33435 1317.66142 -2.37 20.93 2187 2187 MS2 17/22 Linfeng_091311_rIgG_3.raw Medium APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 2.49 0.00 0 24 25 3 388.90863 1164.71134 1.16 30.20 2798 2798 MS2 21/40 Linfeng_122411_rIgG_3.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 311 2.47 0.00 0 22 25 2 606.33905 1211.67082 -2.89 34.77 4058 4058 MS2 17/22 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 364 2.43 0.00 0 5 25 2 696.85217 1392.69707 -2.52 28.69 3252 3252 MS2 17/20 Linfeng_091311_rIgG_4.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 246 2.43 0.00 0 18 25 2 610.85657 1220.70586 1.66 40.15 4205 4205 MS2 15/20 Linfeng_122411_rIgG_4.raw Medium KKEEPSQNDISPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 392 2.41 0.00 2 41 25 3 500.59442 1499.76871 -0.91 13.94 1201 1201 MS2 18/48 Linfeng_091311_rIgG_3.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 234 2.39 0.00 0 2 25 2 633.36200 1265.71672 2.10 42.89 4431 4431 MS2 18/20 Linfeng_122411_rIgG_3.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 239 2.34 0.00 0 7 24 2 610.85699 1220.70671 2.36 40.27 4091 4091 MS2 16/20 Linfeng_122411_rIgG_3.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 226 2.33 0.00 0 7 25 2 633.36249 1265.71770 2.87 42.80 4539 4539 MS2 15/20 Linfeng_122411_rIgG_4.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 460 2.32 0.00 0 62 100 2 696.85876 1392.71025 6.94 27.00 1959 1959 MS2 14/20 Linfeng_20120125_PCAF_3.raw Medium SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 244 2.30 0.00 1 14 100 3 660.98608 1980.94370 7.66 38.01 4154 4154 MS2 23/64 Linfeng_20120125_PCAF_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 335 2.27 0.00 0 26 100 2 834.91467 1668.82207 6.26 44.98 5594 5594 MS2 13/28 Linfeng_20120125_PCAF_2.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 258 2.23 0.00 0 17 25 2 610.85449 1220.70171 -1.74 41.49 4907 4907 MS2 13/20 Linfeng_091311_rIgG_4.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 330 2.18 0.00 0 16 100 2 626.82874 1252.65019 6.54 31.11 2659 2659 MS2 16/20 Linfeng_20120125_PCAF_3.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 267 2.18 0.00 0 4 13 2 610.85419 1220.70110 -2.24 41.37 4898 4898 MS2 16/20 Linfeng_091311_rIgG_3.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 246 2.16 0.00 0 36 25 2 633.35999 1265.71269 -1.08 44.06 5233 5233 MS2 16/20 Linfeng_091311_rIgG_3.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 289 2.11 0.00 0 35 100 2 606.34558 1211.68389 7.89 40.84 4767 4767 MS2 14/22 Linfeng_20120125_PCAF_3.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 358 2.10 0.00 0 11 25 2 920.46631 1839.92534 0.92 35.36 3461 3461 MS2 9/30 Linfeng_122411_rIgG_3.raw High EAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 410 2.09 0.00 0 17 25 2 659.33459 1317.66191 -1.99 21.11 2202 2202 MS2 17/22 Linfeng_091311_rIgG_4.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 319 2.08 0.00 0 43 100 2 834.91473 1668.82219 6.33 44.94 5584 5584 MS2 12/28 Linfeng_20120125_PCAF_2.raw High LSVAcFYGGTPYGGQFER Unambiguous 2 1 IPI00015953.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.08 0.00 0 81 100 2 1004.97272 2008.93816 7.92 46.59 6142 6142 MS2 13/34 Linfeng_20120125_PCAF_3.raw High QDAQSLHGDIPQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 313 2.04 0.00 0 8 25 2 718.85895 1436.71062 -1.58 20.61 2143 2143 MS2 12/24 Linfeng_091311_rIgG_3.raw IPI00016494.2 Isoform 2 of Nucleolar protein 10 13.01 2 5 5 6 8.49 8.15 3 3 9.92 7.52 3 3 638 74.5 8.38 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLENLGLTHLIGSPFLR Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 259 3.82 0.00 0 11 25 3 632.35278 1895.04380 2.74 45.00 4819 4819 MS2 24/64 Linfeng_122411_rIgG_4.raw High VGLLDcALNSVTADSEINSLPTISALK Unambiguous 2 1 IPI00016494.2 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 306 3.41 0.00 0 24 25 3 934.49280 2801.46384 1.29 49.35 5898 5898 MS2 32/104 Linfeng_091311_rIgG_3.raw High LKEDQQTVLKPQFYEIK Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 260 3.11 0.00 1 7 25 4 527.54248 2107.14809 2.20 29.34 2830 2830 MS2 33/96 Linfeng_122411_rIgG_4.raw High DGQYILATGTYKPR Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 349 2.99 0.00 0 13 25 3 528.28009 1582.82572 2.08 27.08 2529 2529 MS2 25/52 Linfeng_122411_rIgG_4.raw High LLEQQELR Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 376 2.56 0.00 0 18 25 2 514.78888 1028.57048 -2.96 24.55 2690 2690 MS2 13/14 Linfeng_091311_rIgG_3.raw Medium LKEDQQTVLKPQFYEIK Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 277 2.51 0.00 1 8 25 4 527.53998 2107.13808 -2.55 30.35 3483 3483 MS2 27/96 Linfeng_091311_rIgG_3.raw IPI00016610.2 Poly(rC)-binding protein 1 16.01 1 3 4 6 17.73 16.01 4 6 356 37.5 7.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QVTITGSAASISLAQYLINAR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 237 4.59 0.00 0 28 25 3 726.40070 2177.18753 -2.30 45.78 5421 5421 MS2 27/80 Linfeng_091311_rIgG_6.raw High QVTITGSAASISLAQYLINAR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 234 3.76 0.00 0 24 25 3 726.40173 2177.19065 -0.87 45.92 5431 5431 MS2 25/80 Linfeng_091311_rIgG_7.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 123 2.57 0.00 0 9 25 2 644.79742 1288.58757 -5.83 22.37 2382 2382 MS2 17/20 Linfeng_091311_rIgG_6.raw High LVVPATQcGSLIGK Unambiguous 1 1 IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 330 2.33 0.00 0 22 25 2 721.90375 1442.80022 -2.37 31.66 3631 3631 MS2 21/26 Linfeng_091311_rIgG_6.raw High IANPVEGSSGR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 318 2.32 0.00 0 14 25 2 543.77930 1086.55132 -2.35 20.79 2170 2170 MS2 18/20 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 2.15 0.00 0 6 25 2 644.79883 1288.59038 -3.65 22.53 2377 2377 MS2 15/20 Linfeng_091311_rIgG_7.raw IPI00017297.1 Matrin-3 32.59 12 20 20 65 119.43 26.45 17 40 50.83 17.00 8 14 28.24 8.50 5 11 847 94.6 6.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLSAAGIGLLAAATQSLSMPASLGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 286 5.77 0.00 0 14 25 3 791.09686 2371.27604 4.61 54.66 5893 5893 MS2 34/96 Linfeng_122411_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 278 5.01 0.00 0 8 25 3 657.03308 1969.08469 2.69 39.70 4018 4018 MS2 39/68 Linfeng_122411_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 273 4.72 0.00 0 22 25 3 657.02985 1969.07499 -2.24 40.71 4814 4814 MS2 35/68 Linfeng_091311_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 69 4.68 0.00 0 21 25 2 1219.69568 2438.38408 1.39 49.70 6014 6014 MS2 19/40 Linfeng_091311_rIgG_2.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 280 4.56 0.00 0 16 25 3 657.03015 1969.07590 -1.78 40.70 4875 4875 MS2 35/68 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 77 4.25 0.00 0 2 25 3 813.46808 2438.38968 3.69 48.49 5151 5151 MS2 33/80 Linfeng_122411_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 388 3.86 0.00 0 20 25 3 598.30103 1792.88852 3.35 44.12 4591 4591 MS2 35/68 Linfeng_122411_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 334 3.86 0.00 0 4 5 4 510.02304 2037.07033 -2.99 29.59 3416 3416 MS2 40/108 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 98 3.85 0.00 0 5 25 3 813.46460 2438.37925 -0.59 49.61 6003 6003 MS2 31/80 Linfeng_091311_rIgG_2.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 64 3.81 0.00 0 3 25 3 540.66174 1619.97068 -1.52 47.21 5701 5701 MS2 29/52 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 349 3.70 0.00 0 6 25 2 896.94757 1792.88786 2.99 44.18 4598 4598 MS2 24/34 Linfeng_122411_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 320 3.65 0.00 0 15 24 2 896.94403 1792.88078 -0.96 45.21 5447 5447 MS2 23/34 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 93 3.55 0.00 0 16 25 3 813.46552 2438.38199 0.54 49.62 5933 5933 MS2 30/80 Linfeng_091311_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 318 3.51 0.00 0 8 25 4 510.02435 2037.07558 -0.42 28.68 2742 2742 MS2 41/108 Linfeng_122411_rIgG_4.raw High VVHIMDFQR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 496 3.48 0.00 0 40 25 3 382.20367 1144.59647 2.83 27.42 2432 2432 MS2 23/32 Linfeng_122411_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 92 3.47 0.00 0 13 25 3 813.46545 2438.38181 0.46 49.76 5950 5950 MS2 29/80 Linfeng_091311_rIgG_4.raw High GYPHLcSIcDLPVHSNK Unambiguous 5 1 IPI00017297.1 C6(Carbamidomethyl); C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.46 0.00 0 44 100 3 666.32184 1996.95096 7.07 38.30 4200 4200 MS2 28/64 Linfeng_20120125_PCAF_2.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 341 3.42 0.00 0 14 8 4 510.02341 2037.07180 -2.27 28.60 2587 2587 MS2 43/108 Linfeng_122411_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 233 3.39 0.00 0 33 25 2 985.04144 1969.07561 -1.93 40.69 4874 4874 MS2 19/34 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 361 3.38 0.00 0 2 25 3 598.29871 1792.88156 -0.53 45.13 5369 5369 MS2 35/68 Linfeng_091311_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 314 3.37 0.00 0 27 25 2 896.94482 1792.88237 -0.08 45.14 5370 5370 MS2 24/34 Linfeng_091311_rIgG_3.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 63 3.37 0.00 0 8 25 3 540.66211 1619.97177 -0.84 47.24 5632 5632 MS2 31/52 Linfeng_091311_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 348 3.35 0.00 0 21 25 4 510.02322 2037.07107 -2.63 29.61 3374 3374 MS2 38/108 Linfeng_091311_rIgG_4.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 344 3.33 0.00 0 5 13 4 510.02344 2037.07192 -2.21 29.51 3368 3368 MS2 41/108 Linfeng_091311_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 337 3.25 0.00 0 9 25 2 896.94879 1792.89031 4.35 44.21 4718 4718 MS2 22/34 Linfeng_122411_rIgG_4.raw High DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 106 3.25 0.00 1 4 14 4 591.27393 2362.07387 1.83 32.19 3056 3056 MS2 35/120 Linfeng_122411_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 11 1 IPI00017297.1 CID 1.0000 0.0000 1 1 94 3.24 0.00 0 35 25 3 813.46558 2438.38218 0.61 49.96 5936 5936 MS2 27/80 Linfeng_091311_rIgG_5.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 244 3.21 0.00 0 28 25 2 985.04578 1969.08428 2.48 39.74 4023 4023 MS2 22/34 Linfeng_122411_rIgG_3.raw High GPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 242 3.07 0.00 0 7 100 2 813.90228 1626.79729 6.25 35.00 3565 3565 MS2 15/28 Linfeng_20120125_PCAF_2.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 3.06 0.00 0 4 25 2 787.38391 1573.76055 2.43 32.57 3106 3106 MS2 18/24 Linfeng_122411_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 359 3.05 0.00 0 8 25 3 598.29816 1792.87992 -1.45 45.14 5437 5437 MS2 36/68 Linfeng_091311_rIgG_2.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.97 0.00 0 11 25 2 787.38013 1573.75298 -2.38 33.72 3967 3967 MS2 18/24 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 25 25 3 598.29755 1792.87809 -2.47 45.37 5369 5369 MS2 27/68 Linfeng_091311_rIgG_6.raw Medium DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 90 2.91 0.00 1 13 25 4 591.27142 2362.06386 -2.40 33.15 3850 3850 MS2 33/120 Linfeng_091311_rIgG_3.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 2.88 0.00 0 28 25 2 787.38068 1573.75408 -1.68 33.67 3917 3917 MS2 17/24 Linfeng_091311_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 344 2.74 0.00 0 17 25 3 679.69556 2037.07212 -2.12 29.61 3382 3382 MS2 26/72 Linfeng_091311_rIgG_3.raw High GYPHLcSIcDLPVHSNK Unambiguous 5 1 IPI00017297.1 C6(Carbamidomethyl); C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 2.69 0.00 0 29 25 3 666.31567 1996.93247 -2.19 29.78 3404 3404 MS2 22/64 Linfeng_091311_rIgG_3.raw High DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 106 2.62 0.00 1 3 25 3 788.02954 2362.07407 1.92 32.25 3064 3064 MS2 19/80 Linfeng_122411_rIgG_3.raw High SQAFIEMETR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 233 2.61 0.00 0 17 100 2 606.29401 1211.58074 6.75 29.07 2483 2483 MS2 16/18 Linfeng_20120125_PCAF_2.raw High SQAFIEMETR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 231 2.59 0.00 0 28 100 2 606.29419 1211.58110 7.05 29.52 2557 2557 MS2 15/18 Linfeng_20120125_PCAF_2.raw High GPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 326 2.56 0.00 0 6 100 3 542.93750 1626.79795 6.65 35.34 3631 3631 MS2 24/56 Linfeng_20120125_PCAF_2.raw High GNLGAGNGNLQGPR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 326 2.55 0.00 0 15 25 2 662.83789 1324.66850 -2.42 21.68 2318 2318 MS2 18/26 Linfeng_091311_rIgG_2.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 23 2.53 0.00 0 12 25 2 552.73193 1104.45659 -2.42 18.23 1835 1835 MS2 14/16 Linfeng_091311_rIgG_2.raw High VVHIMDFQR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 423 2.52 0.00 0 51 25 3 382.20139 1144.58960 -3.17 29.36 3385 3385 MS2 19/32 Linfeng_091311_rIgG_2.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 179 2.50 0.00 0 4 24 2 605.28888 1209.57048 -3.45 24.78 2756 2756 MS2 16/20 Linfeng_091311_rIgG_2.raw Medium DLDELSRYPEDK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 181 2.50 0.00 1 17 25 3 493.90237 1479.69257 -2.48 28.69 3295 3295 MS2 20/44 Linfeng_091311_rIgG_2.raw High SQAFIEMETR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 206 2.47 0.00 0 15 100 2 606.29309 1211.57891 5.24 28.97 2464 2464 MS2 15/18 Linfeng_20120125_PCAF_2.raw High SFQQSSLSR Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 356 2.46 0.00 0 17 25 2 520.26056 1039.51384 -2.78 20.84 2202 2202 MS2 14/16 Linfeng_091311_rIgG_2.raw Medium GPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 272 2.45 0.00 0 46 25 3 542.93213 1626.78183 -3.25 29.75 3438 3438 MS2 19/56 Linfeng_091311_rIgG_2.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 183 2.42 0.00 0 30 25 2 605.28979 1209.57231 -1.93 24.88 2728 2728 MS2 14/20 Linfeng_091311_rIgG_4.raw High SQAFIEMETR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 213 2.41 0.00 0 20 100 2 606.29437 1211.58147 7.35 29.25 2511 2511 MS2 16/18 Linfeng_20120125_PCAF_2.raw Medium VIHLSNLPHSGYSDSAVLK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 345 2.41 0.00 0 4 25 3 679.69641 2037.07468 -0.86 28.71 2601 2601 MS2 28/72 Linfeng_122411_rIgG_3.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 161 2.40 0.00 0 10 25 2 605.29022 1209.57317 -1.23 24.81 2726 2726 MS2 16/20 Linfeng_091311_rIgG_3.raw High SQAFIEMETR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 216 2.36 0.00 0 39 100 2 606.29431 1211.58135 7.25 29.81 2598 2598 MS2 16/18 Linfeng_20120125_PCAF_2.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 54 2.33 0.00 0 55 25 2 810.48956 1619.97185 -0.80 47.16 5623 5623 MS2 18/26 Linfeng_091311_rIgG_3.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 24 2.30 0.00 0 31 25 2 552.73199 1104.45671 -2.31 18.08 1786 1786 MS2 13/16 Linfeng_091311_rIgG_3.raw Medium IKKPEGKPDQK Unambiguous 7 1 IPI00017297.1 CID 1.0000 0.0000 1 1 209 2.29 0.00 1 17 25 3 423.25092 1267.73819 1.00 2.36 195 195 MS2 22/40 Linfeng_091311_rIgG_3.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 287 2.27 0.00 0 11 100 2 787.38702 1573.76677 6.38 39.80 4486 4486 MS2 16/24 Linfeng_20120125_PCAF_2.raw High GAPPSSNIEDFHGLLPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 341 2.22 0.00 0 30 100 2 889.96210 1778.91692 5.43 43.07 5135 5135 MS2 17/32 Linfeng_20120125_PCAF_2.raw High GAPPSSNIEDFHGLLPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 336 2.20 0.00 0 13 100 2 889.95917 1778.91106 2.13 43.28 5184 5184 MS2 17/32 Linfeng_20120125_PCAF_2.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 19 2.17 0.00 0 32 25 2 552.73169 1104.45610 -2.86 18.20 1792 1792 MS2 14/16 Linfeng_091311_rIgG_4.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 54 2.10 0.00 0 29 25 2 810.48883 1619.97038 -1.70 47.15 5694 5694 MS2 19/26 Linfeng_091311_rIgG_2.raw High GPGPLQER Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 209 2.07 0.00 0 17 25 2 427.22894 853.45061 -2.44 19.36 1995 1995 MS2 12/14 Linfeng_091311_rIgG_2.raw High GPGPLQER Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 203 2.02 0.00 0 39 25 2 427.22900 853.45073 -2.30 19.21 1947 1947 MS2 10/14 Linfeng_091311_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 229 2.02 0.00 0 35 25 2 985.04108 1969.07488 -2.30 40.80 4826 4826 MS2 17/34 Linfeng_091311_rIgG_3.raw IPI00017451.1 Splicing factor 3A subunit 1 12.11 2 6 6 13 21.84 12.11 6 8 14.47 10.34 5 5 0.00 793 88.8 5.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 316 4.01 0.00 0 30 25 3 887.10962 2659.31430 -1.36 50.51 6116 6116 MS2 36/92 Linfeng_091311_rIgG_2.raw High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 328 4.01 0.00 0 22 25 3 887.11249 2659.32291 1.88 50.52 6041 6041 MS2 33/92 Linfeng_091311_rIgG_3.raw High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 330 3.92 0.00 0 21 25 3 887.11334 2659.32547 2.84 49.02 5219 5219 MS2 30/92 Linfeng_122411_rIgG_3.raw High FNFLNPNDPYHAYYR Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 165 3.22 0.00 0 8 25 3 644.30127 1930.88926 1.09 35.67 3501 3501 MS2 21/56 Linfeng_122411_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 152 2.71 0.00 0 3 25 2 726.92322 1452.83916 -2.04 30.77 3537 3537 MS2 20/24 Linfeng_091311_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 155 2.69 0.00 0 23 25 2 726.92578 1452.84429 1.49 29.41 2693 2693 MS2 20/24 Linfeng_122411_rIgG_3.raw High DSNSLAYYNMANGAVIHLALK Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 352 2.54 0.00 0 9 25 3 755.71198 2265.12137 -5.27 40.90 3938 3938 MS2 17/80 Linfeng_122411_rIgG_9.raw Medium RTDIFGVEETAIGK Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 379 2.45 0.00 1 36 25 3 512.60547 1535.80185 -3.01 33.41 3883 3883 MS2 24/52 Linfeng_091311_rIgG_3.raw Medium DSNSLAYYNMANGAVIHLALK Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 336 2.30 0.00 0 3 1 3 755.70850 2265.11094 -9.88 42.77 5036 5036 MS2 16/80 Linfeng_091311_rIgG_9.raw Medium FNFLNPNDPYHAYYR Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 137 2.27 0.00 0 37 25 3 644.29803 1930.87955 -3.93 36.54 4335 4335 MS2 19/56 Linfeng_091311_rIgG_2.raw High EVLDQVcYR Unambiguous 2 1 IPI00017451.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 249 2.11 0.00 0 36 25 2 591.28632 1181.56536 2.86 22.34 1792 1792 MS2 12/16 Linfeng_122411_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 155 2.05 0.00 0 25 25 2 726.92267 1452.83806 -2.80 30.89 3592 3592 MS2 18/24 Linfeng_091311_rIgG_2.raw High EVLDQVcYR Unambiguous 2 1 IPI00017451.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 2.04 0.00 0 26 25 2 591.28363 1181.55998 -1.69 27.53 3099 3099 MS2 13/16 Linfeng_091311_rIgG_3.raw IPI00017617.1 Probable ATP-dependent RNA helicase DDX5 20.85 3 6 11 19 18.73 12.70 7 7 12.49 8.96 5 5 15.95 10.10 5 7 614 69.1 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELAQQVQQVAAEYcR Unambiguous 3 1 IPI00017617.1 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 299 4.05 0.00 0 18 25 3 598.29126 1792.85923 -3.07 35.81 4187 4187 MS2 32/56 Linfeng_091311_rIgG_4.raw High STcIYGGAPK Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 2.80 0.00 0 10 25 2 527.25403 1053.50078 -2.48 21.34 2235 2235 MS2 16/18 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 186 2.74 0.00 0 6 25 2 613.85974 1226.71221 1.49 30.62 2996 2996 MS2 19/22 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 2.72 0.00 0 25 25 2 684.86682 1368.72637 -3.00 37.48 4399 4399 MS2 18/24 Linfeng_091311_rIgG_4.raw High TTYLVLDEADR Unambiguous 3 1 IPI00017617.1 CID 1.0000 0.0000 1 1 343 2.63 0.00 0 7 100 2 648.33246 1295.65764 7.58 36.36 4053 4053 MS2 16/20 Linfeng_20120125_PCAF_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 154 2.51 0.00 0 8 67 2 613.86279 1226.71831 6.46 36.66 4114 4114 MS2 18/22 Linfeng_20120125_PCAF_4.raw High TTYLVLDEADR Unambiguous 3 1 IPI00017617.1 CID 1.0000 0.0000 1 1 304 2.51 0.00 0 33 25 2 648.32794 1295.64861 0.61 31.35 3093 3093 MS2 17/20 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.51 0.00 0 31 25 2 684.86975 1368.73223 1.28 36.28 3721 3721 MS2 18/24 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 167 2.50 0.00 0 9 22 2 613.85651 1226.70574 -3.79 32.24 3723 3723 MS2 18/22 Linfeng_091311_rIgG_4.raw Medium FVINYDYPNSSEDYIHR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 195 2.44 0.00 0 22 100 3 711.33392 2131.98722 7.14 41.13 5147 5147 MS2 22/64 Linfeng_20120125_PCAF_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.40 0.00 0 24 25 2 586.80963 1172.61199 2.30 28.86 2766 2766 MS2 16/20 Linfeng_122411_rIgG_4.raw High LLQLVEDR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 496 2.34 0.00 0 11 25 2 493.28818 985.56908 1.38 29.14 2803 2803 MS2 13/14 Linfeng_122411_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.33 0.00 0 38 25 2 586.80688 1172.60649 -2.38 30.52 3497 3497 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLQLVEDR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 319 2.24 0.00 0 24 25 2 493.28629 985.56529 -2.46 30.85 3541 3541 MS2 13/14 Linfeng_091311_rIgG_4.raw High MLDMGFEPQIR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 288 2.23 0.00 0 13 100 2 668.82739 1336.64751 6.45 45.53 6201 6201 MS2 17/20 Linfeng_20120125_PCAF_4.raw High NFYQEHPDLAR Unambiguous 3 1 IPI00017617.1 CID 1.0000 0.0000 1 1 243 2.13 0.00 0 38 100 2 695.33533 1389.66338 6.29 25.72 1876 1876 MS2 13/20 Linfeng_20120125_PCAF_4.raw High TAQEVETYR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 218 2.09 0.00 0 22 25 2 548.76617 1096.52507 -1.72 19.35 1954 1954 MS2 15/16 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 176 2.00 0.00 0 15 81 2 613.86298 1226.71868 6.76 36.84 4156 4156 MS2 19/22 Linfeng_20120125_PCAF_4.raw High MLDMGFEPQIR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 290 2.00 0.00 0 9 100 2 668.82819 1336.64910 7.63 45.64 6228 6228 MS2 16/20 Linfeng_20120125_PCAF_4.raw IPI00018278.3 Histone H2A.V 53.91 9 4 6 66 41.99 20.31 3 19 82.62 20.31 4 35 28.31 53.91 5 12 128 13.5 10.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 175 3.77 0.00 0 17 100 3 965.85645 2895.55478 6.79 55.50 7107 7107 MS2 32/112 Linfeng_20120125_PCAF_2.raw High HLQLAIRGDEELDSLIK Unambiguous 8 1 IPI00018278.3 CID 1.0000 0.0000 1 1 262 3.56 0.00 1 3 23 3 650.69330 1950.06534 -0.11 36.04 3430 3430 MS2 29/64 Linfeng_122411_rIgG_10.raw High HLQLAIRGDEELDSLIK Unambiguous 8 1 IPI00018278.3 CID 1.0000 0.0000 1 1 254 3.55 0.00 1 16 25 4 488.27234 1950.06753 1.01 35.95 3419 3419 MS2 38/96 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.76 0.00 0 30 87 2 472.77234 944.53740 6.48 34.57 4207 4207 MS2 14/16 Linfeng_20120125_PCAF_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 402 2.55 0.00 0 2 6 2 559.78162 1118.55596 -1.49 31.90 2895 2895 MS2 15/18 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 499 2.45 0.00 0 6 54 2 559.78638 1118.56548 7.02 38.06 4673 4673 MS2 15/18 Linfeng_20120125_PCAF_10.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 474 2.44 0.00 0 10 5 2 559.78101 1118.55474 -2.58 33.43 3991 3991 MS2 15/18 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 843 2.40 0.00 0 36 96 2 472.77194 944.53661 5.64 34.48 4185 4185 MS2 14/16 Linfeng_20120125_PCAF_1.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 470 2.38 0.00 0 13 25 2 559.78302 1118.55876 1.02 32.20 2992 2992 MS2 15/18 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 256 2.27 0.00 0 38 100 2 685.90277 1370.79827 5.77 31.81 3208 3208 MS2 17/26 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.23 0.00 0 12 100 2 425.76959 850.53191 7.20 23.92 1924 1924 MS2 11/12 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 233 2.15 0.00 0 35 100 2 685.90369 1370.80010 7.10 32.39 3347 3347 MS2 16/26 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 569 2.09 0.00 0 40 100 2 472.77246 944.53765 6.74 36.29 4266 4266 MS2 13/16 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 580 2.07 0.00 0 41 100 2 472.77252 944.53777 6.87 34.47 3769 3769 MS2 13/16 Linfeng_20120125_PCAF_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 608 2.05 0.00 0 20 22 2 472.77252 944.53777 6.87 34.82 4394 4394 MS2 14/16 Linfeng_20120125_PCAF_8.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.05 0.00 0 25 100 2 425.76959 850.53191 7.20 24.93 2010 2010 MS2 11/12 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 591 2.02 0.00 0 14 40 2 472.77216 944.53703 6.09 46.61 6648 6648 MS2 14/16 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00018288.1 DNA-directed RNA polymerase II subunit RPB3 17.09 1 3 3 3 9.29 17.09 3 3 275 31.4 4.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEYSELDEDESQAPYDPNGKPER Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 43 4.12 0.00 0 5 25 3 885.71503 2655.13053 -0.93 27.79 3096 3096 MS2 32/88 Linfeng_091311_rIgG_7.raw High LGLIPLISDDIVDK Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 156 2.66 0.00 0 35 25 2 755.93927 1510.87126 -1.00 46.91 5554 5554 MS2 17/26 Linfeng_091311_rIgG_7.raw High ITELTDENVK Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 458 2.51 0.00 0 15 25 2 581.30164 1161.59599 -3.29 23.92 2570 2570 MS2 13/18 Linfeng_091311_rIgG_7.raw IPI00019038.1 Lysozyme C 33.11 1 3 3 6 18.04 33.11 3 6 148 16.5 9.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPGAVNAcHLScSALLQDNIADAVAcAK Unambiguous 1 1 IPI00019038.1 C8(Carbamidomethyl); C12(Carbamidomethyl); C26(Carbamidomethyl) CID 1.0000 0.0000 1 1 171 4.07 0.00 0 6 23 3 976.46259 2927.37320 -2.65 37.79 4561 4561 MS2 28/108 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 279 3.55 0.00 0 21 25 3 467.56323 1400.67514 -3.83 35.57 4273 4273 MS2 28/44 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 240 3.30 0.00 0 6 19 2 700.84131 1400.67534 -3.69 35.53 4268 4268 MS2 18/22 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 248 2.64 0.00 0 24 25 2 700.84204 1400.67681 -2.65 35.75 4144 4144 MS2 17/22 Linfeng_091311_rIgG_9.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 259 2.29 0.00 0 38 25 2 700.84143 1400.67558 -3.52 35.79 4165 4165 MS2 13/22 Linfeng_091311_rIgG_6.raw High ATNYNAGDR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 96 2.19 0.00 0 21 25 2 491.22275 981.43822 -0.27 12.86 1118 1118 MS2 14/16 Linfeng_091311_rIgG_10.raw IPI00019359.4 "Keratin, type I cytoskeletal 9" 84.11 1 39 39 918 829.81 72.23 29 205 908.66 54.90 30 211 2026.93 67.58 27 502 623 62.0 5.24 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 8.31 0.00 0 0 100 3 1075.10596 3223.30332 6.69 19.32 1362 1362 MS2 52/156 Linfeng_20120125_PCAF_8.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 4 8.24 0.00 0 3 25 4 1243.98645 4972.92397 -2.55 18.97 1917 1917 MS2 63/390 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 8.16 0.00 0 2 8 3 1075.09985 3223.28501 1.01 3.83 400 400 MS2 53/156 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 8.09 0.00 0 1 17 3 1075.09473 3223.26963 -3.76 21.87 2345 2345 MS2 51/156 Linfeng_091311_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.93 0.00 0 2 25 3 1075.10388 3223.29709 4.76 21.17 1671 1671 MS2 48/156 Linfeng_122411_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.92 0.00 0 0 100 3 1075.10486 3223.30002 5.67 20.18 1338 1338 MS2 54/156 Linfeng_20120125_PCAF_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.90 0.00 0 1 100 3 1075.10608 3223.30368 6.80 20.43 1346 1346 MS2 53/156 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 7.90 0.00 0 1 10 3 1075.09399 3223.26743 -4.44 22.17 2357 2357 MS2 50/156 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.83 0.00 0 1 100 3 1075.10571 3223.30259 6.46 20.42 1357 1357 MS2 53/156 Linfeng_20120125_PCAF_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.79 0.00 0 0 25 3 1075.10217 3223.29197 3.17 21.04 1686 1686 MS2 51/156 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.78 0.00 0 2 100 3 1075.10596 3223.30332 6.69 20.28 1435 1435 MS2 49/156 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.75 0.00 0 2 100 3 1075.10645 3223.30478 7.15 20.22 1430 1430 MS2 51/156 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.69 0.00 0 1 25 3 1075.10217 3223.29197 3.17 21.03 1783 1783 MS2 50/156 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 3 7.68 0.00 0 2 25 3 1075.09705 3223.27658 -1.60 21.82 2301 2301 MS2 52/156 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 7.60 0.00 0 0 25 3 1075.09326 3223.26523 -5.13 21.29 1979 1979 MS2 56/156 Linfeng_091311_rIgG_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.56 0.00 0 23 100 3 1075.10352 3223.29599 4.42 20.62 1449 1449 MS2 50/156 Linfeng_20120125_PCAF_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.53 0.00 0 0 25 3 1075.10156 3223.29013 2.60 20.84 1738 1738 MS2 54/156 Linfeng_122411_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.52 0.00 0 1 100 3 1075.10559 3223.30222 6.35 20.75 1328 1328 MS2 51/156 Linfeng_20120125_PCAF_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.51 0.00 0 0 100 3 1075.10547 3223.30185 6.24 20.51 1365 1365 MS2 52/156 Linfeng_20120125_PCAF_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.46 0.00 0 0 100 3 1075.10522 3223.30112 6.01 20.35 1300 1300 MS2 50/156 Linfeng_20120125_PCAF_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.44 0.00 0 0 100 3 1075.10461 3223.29929 5.44 20.18 1421 1421 MS2 55/156 Linfeng_20120125_PCAF_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.44 0.00 0 4 100 3 1075.10632 3223.30442 7.03 20.47 1362 1362 MS2 53/156 Linfeng_20120125_PCAF_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.40 0.00 0 0 100 3 1075.10510 3223.30075 5.90 20.25 1328 1328 MS2 45/156 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.33 0.00 0 1 100 3 1075.10718 3223.30698 7.83 19.68 1390 1390 MS2 49/156 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.26 0.00 0 3 100 3 1075.10486 3223.30002 5.67 20.56 1528 1528 MS2 49/156 Linfeng_20120125_PCAF_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.24 0.00 0 2 100 3 1075.10535 3223.30149 6.12 19.38 1366 1366 MS2 49/156 Linfeng_20120125_PCAF_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.21 0.00 0 1 100 3 1075.10571 3223.30259 6.46 22.76 1753 1753 MS2 54/156 Linfeng_20120125_PCAF_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.20 0.00 0 0 25 3 1075.10120 3223.28904 2.26 21.17 1634 1634 MS2 47/156 Linfeng_122411_rIgG_8.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 188 7.18 0.00 1 9 100 3 1131.54553 3392.62204 3.86 48.17 7464 7464 MS2 44/116 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.17 0.00 0 0 100 3 1075.10571 3223.30259 6.46 23.03 1792 1792 MS2 46/156 Linfeng_20120125_PCAF_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.16 0.00 0 0 100 3 1075.10522 3223.30112 6.01 21.67 1653 1653 MS2 50/156 Linfeng_20120125_PCAF_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 7.13 0.00 0 0 21 3 1088.84424 3264.51816 1.28 42.01 4242 4242 MS2 40/112 Linfeng_122411_rIgG_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 7.08 0.00 1 14 25 3 656.02600 1966.06345 1.52 35.02 3446 3446 MS2 38/64 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.06 0.00 0 0 25 3 1075.10144 3223.28977 2.49 21.20 1554 1554 MS2 48/156 Linfeng_122411_rIgG_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 7.04 0.00 0 0 100 3 1075.10645 3223.30478 7.15 22.70 1742 1742 MS2 52/156 Linfeng_20120125_PCAF_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.01 0.00 0 0 100 3 1075.10437 3223.29856 5.21 20.76 1384 1384 MS2 48/156 Linfeng_20120125_PCAF_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 147 7.00 0.00 0 0 25 3 1088.84497 3264.52036 1.96 41.70 4402 4402 MS2 38/112 Linfeng_122411_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 153 6.99 0.00 0 1 25 3 1088.84607 3264.52365 2.97 41.89 4314 4314 MS2 39/112 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.94 0.00 0 0 100 3 1075.10571 3223.30259 6.46 21.77 1551 1551 MS2 47/156 Linfeng_20120125_PCAF_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 116 6.94 0.00 0 0 21 3 837.38403 2510.13755 2.26 33.35 3350 3350 MS2 42/88 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 6.93 0.00 0 8 25 3 837.38434 2510.13846 2.63 33.39 3239 3239 MS2 43/88 Linfeng_122411_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 132 6.91 0.00 0 11 25 3 1088.84143 3264.50974 -1.30 42.50 5034 5034 MS2 38/112 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.90 0.00 0 2 100 3 1075.10608 3223.30368 6.80 21.40 1521 1521 MS2 45/156 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 45 6.89 0.00 0 3 5 3 902.39459 2705.16922 2.95 36.09 3581 3581 MS2 45/124 Linfeng_122411_rIgG_2.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 3 6.89 0.00 0 0 100 4 1243.99622 4972.96303 5.31 14.40 1037 1037 MS2 62/390 Linfeng_20120125_PCAF_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 157 6.88 0.00 0 0 22 3 1088.84619 3264.52402 3.08 42.03 3923 3923 MS2 37/112 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 4 6.87 0.00 0 0 25 4 1243.98840 4972.93178 -0.98 18.12 1747 1747 MS2 67/390 Linfeng_091311_rIgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.85 0.00 0 3 100 3 1075.10657 3223.30515 7.26 22.65 1734 1734 MS2 47/156 Linfeng_20120125_PCAF_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.82 0.00 0 0 100 3 1075.10547 3223.30185 6.24 20.39 1431 1431 MS2 45/156 Linfeng_20120125_PCAF_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.81 0.00 0 2 100 3 1075.10217 3223.29197 3.17 20.65 1452 1452 MS2 44/156 Linfeng_20120125_PCAF_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.80 0.00 0 0 100 3 1075.10559 3223.30222 6.35 21.82 1555 1555 MS2 47/156 Linfeng_20120125_PCAF_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 6.80 0.00 0 1 25 3 1088.84692 3264.52622 3.75 41.88 4469 4469 MS2 40/112 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.79 0.00 0 0 100 3 1075.10571 3223.30259 6.46 19.33 1365 1365 MS2 48/156 Linfeng_20120125_PCAF_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 112 6.78 0.00 0 4 25 3 837.38354 2510.13608 1.68 33.65 3443 3443 MS2 43/88 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.77 0.00 0 2 100 3 1075.10437 3223.29856 5.21 19.17 1428 1428 MS2 45/156 Linfeng_20120125_PCAF_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.76 0.00 0 3 100 3 1075.10657 3223.30515 7.26 20.55 1360 1360 MS2 47/156 Linfeng_20120125_PCAF_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 106 6.76 0.00 0 1 4 3 837.38147 2510.12986 -0.80 33.33 3488 3488 MS2 42/88 Linfeng_122411_rIgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.75 0.00 0 0 100 3 1075.10486 3223.30002 5.67 19.30 1255 1255 MS2 46/156 Linfeng_20120125_PCAF_9.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.72 0.00 0 0 100 3 1075.10364 3223.29636 4.53 20.31 1529 1529 MS2 44/156 Linfeng_20120125_PCAF_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.72 0.00 0 0 100 3 1075.10559 3223.30222 6.35 20.14 1319 1319 MS2 50/156 Linfeng_20120125_PCAF_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 6.72 0.00 0 26 25 3 902.39374 2705.16666 2.00 36.19 3348 3348 MS2 45/124 Linfeng_122411_rIgG_9.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.71 0.00 0 1 100 3 1075.10547 3223.30185 6.24 20.48 1352 1352 MS2 49/156 Linfeng_20120125_PCAF_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 6.71 0.00 0 2 4 3 1088.84167 3264.51047 -1.07 41.81 4657 4657 MS2 38/112 Linfeng_122411_rIgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.71 0.00 0 0 100 3 1075.10498 3223.30039 5.78 19.35 1446 1446 MS2 47/156 Linfeng_20120125_PCAF_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.70 0.00 0 4 100 3 1075.10620 3223.30405 6.92 23.19 1682 1682 MS2 42/156 Linfeng_20120125_PCAF_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 150 6.69 0.00 0 1 1 3 1088.84534 3264.52146 2.29 48.53 7572 7572 MS2 37/112 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.69 0.00 0 1 100 3 1075.10535 3223.30149 6.12 20.25 1426 1426 MS2 47/156 Linfeng_20120125_PCAF_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 6.60 0.00 0 2 5 3 1088.84326 3264.51523 0.39 41.90 4301 4301 MS2 39/112 Linfeng_122411_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.57 0.00 0 0 100 3 1075.10583 3223.30295 6.58 19.55 1273 1273 MS2 51/156 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.53 0.00 0 1 100 3 1075.10522 3223.30112 6.01 20.38 1514 1514 MS2 49/156 Linfeng_20120125_PCAF_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.53 0.00 0 0 100 3 1075.10583 3223.30295 6.58 19.08 1346 1346 MS2 45/156 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 33 6.51 0.00 0 2 25 3 902.39227 2705.16227 0.37 36.02 3546 3546 MS2 46/124 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 6.51 0.00 0 1 25 3 902.39404 2705.16758 2.34 36.28 3771 3771 MS2 47/124 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.44 0.00 0 28 25 3 1075.10645 3223.30478 7.15 22.56 1846 1846 MS2 42/156 Linfeng_122411_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.44 0.00 0 2 2 3 1088.84644 3264.52475 3.30 48.53 6807 6807 MS2 38/112 Linfeng_20120125_PCAF_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 6.40 0.00 0 7 25 3 1088.83984 3264.50498 -2.75 42.66 5183 5183 MS2 39/112 Linfeng_091311_rIgG_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.39 0.00 0 30 100 3 1075.10669 3223.30552 7.37 23.08 1801 1801 MS2 46/156 Linfeng_20120125_PCAF_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 32 6.37 0.00 0 3 3 3 902.39191 2705.16117 -0.03 36.01 3860 3860 MS2 45/124 Linfeng_122411_rIgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.36 0.00 0 2 100 3 1075.10400 3223.29746 4.87 20.61 1372 1372 MS2 50/156 Linfeng_20120125_PCAF_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 125 6.36 0.00 0 6 7 3 1088.83887 3264.50205 -3.65 42.70 5016 5016 MS2 40/112 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 6.36 0.00 1 8 25 3 656.02661 1966.06528 2.45 35.14 3433 3433 MS2 38/64 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 6.35 0.00 0 8 9 3 902.38812 2705.14981 -4.23 36.87 4379 4379 MS2 45/124 Linfeng_091311_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 109 6.34 0.00 0 2 15 3 837.38232 2510.13242 0.22 33.58 3168 3168 MS2 41/88 Linfeng_122411_rIgG_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.31 0.00 0 0 100 3 1075.10583 3223.30295 6.58 20.65 1369 1369 MS2 49/156 Linfeng_20120125_PCAF_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 6.27 0.00 0 1 25 3 902.39423 2705.16812 2.54 35.28 3079 3079 MS2 45/124 Linfeng_122411_rIgG_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.26 0.00 0 3 100 3 1075.10474 3223.29966 5.55 19.35 1256 1256 MS2 45/156 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.26 0.00 0 1 100 3 1075.10657 3223.30515 7.26 20.69 1379 1379 MS2 46/156 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 118 6.26 0.00 0 4 5 3 837.38440 2510.13864 2.70 33.28 3197 3197 MS2 42/88 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 6.24 0.00 0 1 25 3 902.39337 2705.16556 1.59 35.99 3684 3684 MS2 46/124 Linfeng_122411_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.24 0.00 0 0 100 3 1075.10522 3223.30112 6.01 21.88 1471 1471 MS2 43/156 Linfeng_20120125_PCAF_4.raw High GFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTANEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 10 6.23 0.00 0 3 25 4 1216.27783 4862.08950 1.91 45.28 5383 5383 MS2 49/348 Linfeng_091311_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.20 0.00 0 0 25 3 1088.84644 3264.52475 3.30 41.97 4073 4073 MS2 41/112 Linfeng_122411_rIgG_9.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.17 0.00 0 0 100 3 1075.10498 3223.30039 5.78 20.83 1466 1466 MS2 45/156 Linfeng_20120125_PCAF_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 6.16 0.00 0 3 3 4 816.88458 3264.51650 0.77 41.88 4299 4299 MS2 44/168 Linfeng_122411_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.15 0.00 0 3 100 3 1075.10510 3223.30075 5.90 21.51 1531 1531 MS2 49/156 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.15 0.00 0 0 100 3 1075.10608 3223.30368 6.80 21.43 1637 1637 MS2 44/156 Linfeng_20120125_PCAF_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 6.14 0.00 0 5 9 3 902.38892 2705.15219 -3.35 37.01 4283 4283 MS2 45/124 Linfeng_091311_rIgG_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.14 0.00 0 2 25 4 816.88666 3264.52480 3.32 41.88 4313 4313 MS2 43/168 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 117 6.13 0.00 0 0 25 3 837.38446 2510.13883 2.77 33.47 3006 3006 MS2 41/88 Linfeng_122411_rIgG_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 6.13 0.00 0 4 0 3 837.38214 2510.13187 0.00 3.89 389 389 MS2 42/88 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 136 6.13 0.00 0 3 100 3 837.38831 2510.15036 7.37 41.08 5311 5311 MS2 40/88 Linfeng_20120125_PCAF_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 131 6.11 0.00 0 6 5 3 1088.84143 3264.50974 -1.30 42.31 4825 4825 MS2 40/112 Linfeng_091311_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 6.10 0.00 0 21 42 3 902.39398 2705.16739 2.27 43.15 6476 6476 MS2 45/124 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.09 0.00 0 0 100 3 1075.10291 3223.29416 3.85 18.03 1191 1191 MS2 42/156 Linfeng_20120125_PCAF_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 334 6.09 0.00 0 2 16 2 919.48962 1837.97197 3.53 48.41 7528 7528 MS2 25/30 Linfeng_20120125_PCAF_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.07 0.00 0 0 100 3 1075.10571 3223.30259 6.46 20.21 1519 1519 MS2 47/156 Linfeng_20120125_PCAF_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 6.06 0.00 0 2 8 3 1088.84204 3264.51157 -0.74 42.66 5030 5030 MS2 40/112 Linfeng_091311_rIgG_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 137 6.04 0.00 0 1 3 3 1088.84375 3264.51670 0.83 48.53 6614 6614 MS2 39/112 Linfeng_20120125_PCAF_3.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 6.03 0.00 1 4 23 3 656.02655 1966.06510 2.36 35.17 3580 3580 MS2 39/64 Linfeng_122411_rIgG_4.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 6.02 0.00 1 3 25 3 697.96515 2091.88089 -0.73 15.32 1385 1385 MS2 45/100 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.01 0.00 0 0 25 3 1075.10193 3223.29123 2.94 21.15 1855 1855 MS2 44/156 Linfeng_122411_rIgG_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.98 0.00 0 16 1 3 837.37952 2510.12400 -3.14 34.18 4027 4027 MS2 43/88 Linfeng_091311_rIgG_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.98 0.00 0 11 25 3 902.38788 2705.14908 -4.50 36.80 4313 4313 MS2 45/124 Linfeng_091311_rIgG_4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 295 5.98 0.00 1 12 8 3 656.02515 1966.06089 0.22 35.01 3723 3723 MS2 39/64 Linfeng_122411_rIgG_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 5.97 0.00 0 17 25 3 837.38416 2510.13791 2.41 33.60 2868 2868 MS2 41/88 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 105 5.97 0.00 0 6 1 3 837.38104 2510.12857 -1.31 34.29 3988 3988 MS2 44/88 Linfeng_091311_rIgG_4.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 207 5.95 0.00 2 4 100 4 916.44946 3662.77602 6.29 47.96 6982 6982 MS2 50/186 Linfeng_20120125_PCAF_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 5.91 0.00 0 4 100 3 1075.10596 3223.30332 6.69 21.29 1422 1422 MS2 47/156 Linfeng_20120125_PCAF_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 5.90 0.00 0 12 25 3 1088.84229 3264.51230 -0.51 42.44 5031 5031 MS2 40/112 Linfeng_091311_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.89 0.00 0 4 100 3 1075.10449 3223.29892 5.33 19.18 1271 1271 MS2 42/156 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 5.89 0.00 0 21 100 3 837.38770 2510.14853 6.64 40.94 5724 5724 MS2 40/88 Linfeng_20120125_PCAF_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 47 5.88 0.00 0 13 100 3 902.39618 2705.17398 4.71 43.31 5661 5661 MS2 41/124 Linfeng_20120125_PCAF_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 5.87 0.00 0 4 25 4 816.88702 3264.52627 3.77 41.84 4464 4464 MS2 39/168 Linfeng_122411_rIgG_6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 5.87 0.00 1 14 35 3 793.07202 2377.20151 5.57 46.20 7409 7409 MS2 31/80 Linfeng_20120125_PCAF_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 5.85 0.00 0 6 6 3 902.38867 2705.15146 -3.62 36.88 4092 4092 MS2 44/124 Linfeng_091311_rIgG_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.84 0.00 0 5 100 3 1075.10522 3223.30112 6.01 20.38 1327 1327 MS2 42/156 Linfeng_20120125_PCAF_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.84 0.00 0 6 18 3 902.38849 2705.15091 -3.82 37.07 4318 4318 MS2 45/124 Linfeng_091311_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 5.83 0.00 0 2 33 3 837.38843 2510.15073 7.51 41.93 5332 5332 MS2 41/88 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 5.83 0.00 0 10 10 3 902.38910 2705.15274 -3.14 37.14 4340 4340 MS2 48/124 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 5.83 0.00 0 6 25 3 902.39429 2705.16831 2.61 36.35 3213 3213 MS2 45/124 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 137 5.82 0.00 0 1 65 3 837.38831 2510.15036 7.37 41.23 4864 4864 MS2 40/88 Linfeng_20120125_PCAF_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 3 5.81 0.00 1 6 25 4 906.11145 3621.42397 -3.53 20.57 2093 2093 MS2 58/258 Linfeng_091311_rIgG_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 259 5.81 0.00 2 4 100 3 1118.22644 3352.66477 6.21 38.01 4592 4592 MS2 45/120 Linfeng_20120125_PCAF_6.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 5.78 0.00 1 3 17 3 656.02362 1966.05631 -2.11 36.02 4195 4195 MS2 39/64 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 5.77 0.00 0 15 25 3 902.39398 2705.16739 2.27 36.22 3454 3454 MS2 42/124 Linfeng_122411_rIgG_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 156 5.76 0.00 0 0 25 3 1088.84631 3264.52439 3.19 41.92 4184 4184 MS2 35/112 Linfeng_122411_rIgG_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 5.76 0.00 0 0 100 3 1075.10608 3223.30368 6.80 22.80 1760 1760 MS2 43/156 Linfeng_20120125_PCAF_10.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 310 5.75 0.00 0 23 25 2 919.48462 1837.96196 -1.92 38.29 4484 4484 MS2 25/30 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 5.73 0.00 0 0 100 3 902.39423 2705.16812 2.54 43.75 5456 5456 MS2 42/124 Linfeng_20120125_PCAF_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 125 5.73 0.00 0 3 7 3 1088.83948 3264.50388 -3.09 42.41 5092 5092 MS2 41/112 Linfeng_091311_rIgG_2.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 196 5.70 0.00 1 0 25 3 960.79211 2880.36179 2.87 34.23 3345 3345 MS2 37/100 Linfeng_122411_rIgG_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 5.69 0.00 0 73 100 3 902.39307 2705.16465 1.25 43.91 5808 5808 MS2 41/124 Linfeng_20120125_PCAF_4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 5.67 0.00 1 18 25 3 656.02625 1966.06418 1.89 35.50 3106 3106 MS2 38/64 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 139 5.66 0.00 0 3 100 3 837.38861 2510.15128 7.73 41.94 4891 4891 MS2 40/88 Linfeng_20120125_PCAF_2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 30 5.62 0.00 1 2 25 3 697.96539 2091.88163 -0.38 15.74 1469 1469 MS2 43/100 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.62 0.00 0 1 25 3 1075.10193 3223.29123 2.94 21.19 1566 1566 MS2 46/156 Linfeng_122411_rIgG_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.61 0.00 0 9 16 3 902.38855 2705.15110 -3.75 36.77 4318 4318 MS2 41/124 Linfeng_091311_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.61 0.00 0 7 1 3 837.38055 2510.12711 -1.90 34.41 3988 3988 MS2 39/88 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.60 0.00 0 0 100 3 1075.10547 3223.30185 6.24 19.34 1232 1232 MS2 44/156 Linfeng_20120125_PCAF_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 5.59 0.00 0 6 100 3 1075.10583 3223.30295 6.58 21.31 1514 1514 MS2 45/156 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.59 0.00 0 23 10 3 902.38855 2705.15110 -3.75 37.07 4314 4314 MS2 43/124 Linfeng_091311_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 142 5.58 0.00 0 3 25 4 816.88507 3264.51845 1.37 41.85 3900 3900 MS2 47/168 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 5.57 0.00 1 18 25 3 656.02667 1966.06546 2.54 32.37 2712 2712 MS2 36/64 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 137 5.57 0.00 0 6 86 3 837.38818 2510.15000 7.22 41.36 4897 4897 MS2 38/88 Linfeng_20120125_PCAF_7.raw High LASYLDKVQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 240 5.56 0.00 2 13 25 4 832.16406 3325.63442 3.61 44.04 4588 4588 MS2 44/162 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.55 0.00 0 29 11 3 837.37885 2510.12198 -3.94 34.36 4036 4036 MS2 43/88 Linfeng_091311_rIgG_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 295 5.55 0.00 1 18 25 3 656.02509 1966.06070 0.12 35.39 3660 3660 MS2 38/64 Linfeng_122411_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 102 5.54 0.00 0 7 4 3 837.38013 2510.12583 -2.41 34.33 3933 3933 MS2 40/88 Linfeng_091311_rIgG_5.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 5.53 0.00 2 8 100 4 838.92273 3352.66909 7.50 37.98 4147 4147 MS2 52/180 Linfeng_20120125_PCAF_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 146 5.52 0.00 0 5 15 4 816.88550 3264.52016 1.90 42.00 4241 4241 MS2 45/168 Linfeng_122411_rIgG_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 321 5.52 0.00 0 4 55 2 919.49084 1837.97441 4.85 48.42 6579 6579 MS2 25/30 Linfeng_20120125_PCAF_3.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 5.51 0.00 1 4 14 3 793.06616 2377.18393 -1.82 36.13 3560 3560 MS2 35/80 Linfeng_122411_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.50 0.00 0 13 5 3 837.37988 2510.12510 -2.70 34.23 3989 3989 MS2 40/88 Linfeng_091311_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.50 0.00 0 4 100 3 1075.10547 3223.30185 6.24 21.55 1444 1444 MS2 45/156 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 5.49 0.00 0 7 100 3 902.39362 2705.16629 1.86 43.64 5932 5932 MS2 42/124 Linfeng_20120125_PCAF_6.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 5.44 0.00 1 3 100 3 656.02899 1966.07242 6.08 48.12 6317 6317 MS2 35/64 Linfeng_20120125_PCAF_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 5.44 0.00 0 10 98 2 919.49231 1837.97734 6.45 48.42 6773 6773 MS2 26/30 Linfeng_20120125_PCAF_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 5.44 0.00 0 6 5 4 816.88336 3264.51162 -0.72 42.57 5043 5043 MS2 40/168 Linfeng_091311_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 383 5.43 0.00 1 2 25 3 793.07031 2377.19638 3.42 36.12 3701 3701 MS2 35/80 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 53 5.43 0.00 0 31 100 3 902.39709 2705.17673 5.72 43.15 5318 5318 MS2 39/124 Linfeng_20120125_PCAF_7.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 5.42 0.00 1 5 25 3 793.06879 2377.19181 1.49 36.11 3583 3583 MS2 35/80 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.41 0.00 0 24 25 4 806.57703 3223.28628 1.40 20.85 1820 1820 MS2 53/234 Linfeng_122411_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 285 5.39 0.00 0 8 38 2 919.49091 1837.97453 4.92 48.39 7089 7089 MS2 25/30 Linfeng_20120125_PCAF_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.37 0.00 0 16 5 3 837.37964 2510.12436 -2.99 34.21 3723 3723 MS2 41/88 Linfeng_091311_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 5.37 0.00 0 35 80 3 902.39417 2705.16794 2.47 42.97 6431 6431 MS2 41/124 Linfeng_20120125_PCAF_8.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 361 5.37 0.00 0 1 25 3 699.01874 2095.04166 1.91 39.15 3968 3968 MS2 33/64 Linfeng_122411_rIgG_2.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 187 5.35 0.00 1 6 100 4 848.91339 3392.63173 6.72 48.11 6505 6505 MS2 41/174 Linfeng_20120125_PCAF_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 5.35 0.00 0 36 100 2 919.48749 1837.96770 1.20 48.41 6391 6391 MS2 23/30 Linfeng_20120125_PCAF_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 377 5.34 0.00 1 2 25 3 793.06952 2377.19400 2.42 36.41 3787 3787 MS2 37/80 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 5.33 0.00 0 7 100 3 902.39307 2705.16465 1.25 43.73 5466 5466 MS2 40/124 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 5.28 0.00 0 3 56 2 919.49182 1837.97637 5.92 48.42 6887 6887 MS2 25/30 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 5.28 0.00 1 11 100 3 965.80640 2895.40464 4.96 35.45 3838 3838 MS2 35/104 Linfeng_20120125_PCAF_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.28 0.00 0 0 25 3 1075.10071 3223.28757 1.81 22.12 1880 1880 MS2 40/156 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 56 5.26 0.00 0 43 100 3 902.39764 2705.17838 6.33 43.12 5801 5801 MS2 43/124 Linfeng_20120125_PCAF_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.25 0.00 0 5 4 4 816.88312 3264.51064 -1.02 42.40 4837 4837 MS2 43/168 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 5.23 0.00 1 4 100 3 656.02960 1966.07425 7.01 48.11 6503 6503 MS2 38/64 Linfeng_20120125_PCAF_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 5.21 0.00 0 5 100 3 902.39313 2705.16483 1.32 43.13 6247 6247 MS2 42/124 Linfeng_20120125_PCAF_1.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 5.20 0.00 1 2 100 4 848.91376 3392.63320 7.15 48.10 6811 6811 MS2 45/174 Linfeng_20120125_PCAF_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 5.17 0.00 1 7 100 3 793.07257 2377.20316 6.27 47.31 7253 7253 MS2 32/80 Linfeng_20120125_PCAF_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 359 5.16 0.00 0 7 25 3 699.01868 2095.04148 1.82 39.16 3564 3564 MS2 34/64 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 5.15 0.00 1 11 25 3 656.02338 1966.05558 -2.48 35.90 4198 4198 MS2 37/64 Linfeng_091311_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 296 5.15 0.00 1 5 100 3 965.80908 2895.41269 7.75 34.44 4302 4302 MS2 37/104 Linfeng_20120125_PCAF_8.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 5.14 0.00 0 2 22 3 699.01605 2095.03360 -1.94 40.20 4745 4745 MS2 32/64 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.13 0.00 0 1 25 4 806.57843 3223.29189 3.15 20.87 1741 1741 MS2 56/234 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 5.13 0.00 0 0 100 2 1353.08936 2705.17143 3.76 43.52 5902 5902 MS2 27/62 Linfeng_20120125_PCAF_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 5.13 0.00 0 7 100 3 837.38562 2510.14231 4.16 40.44 5786 5786 MS2 38/88 Linfeng_20120125_PCAF_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 386 5.11 0.00 1 16 100 3 793.07269 2377.20353 6.42 47.50 6358 6358 MS2 35/80 Linfeng_20120125_PCAF_3.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 5.10 0.00 1 83 25 3 656.02307 1966.05466 -2.95 36.00 4153 4153 MS2 39/64 Linfeng_091311_rIgG_5.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 5.10 0.00 1 6 25 4 720.84570 2880.36098 2.59 33.97 3429 3429 MS2 48/150 Linfeng_122411_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 148 5.09 0.00 0 4 25 4 816.88611 3264.52260 2.64 41.69 4401 4401 MS2 45/168 Linfeng_122411_rIgG_4.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 5.09 0.00 1 2 25 4 720.84546 2880.36001 2.25 33.99 3288 3288 MS2 47/150 Linfeng_122411_rIgG_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 5.08 0.00 0 2 34 3 613.32904 1837.97257 3.85 48.35 7078 7078 MS2 30/60 Linfeng_20120125_PCAF_6.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 190 5.08 0.00 1 3 15 4 848.91058 3392.62050 3.41 37.94 3815 3815 MS2 46/174 Linfeng_122411_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 5.08 0.00 2 4 100 4 838.92316 3352.67080 8.01 37.86 4555 4555 MS2 56/180 Linfeng_20120125_PCAF_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.07 0.00 0 4 5 4 816.88312 3264.51064 -1.02 42.49 5103 5103 MS2 46/168 Linfeng_091311_rIgG_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 5.07 0.00 1 14 100 3 793.07214 2377.20188 5.73 47.71 6218 6218 MS2 36/80 Linfeng_20120125_PCAF_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 5.06 0.00 0 11 17 3 613.32471 1837.95957 -3.22 38.03 4477 4477 MS2 30/60 Linfeng_091311_rIgG_3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 28 5.06 0.00 1 13 25 3 697.96515 2091.88089 -0.73 15.23 1384 1384 MS2 42/100 Linfeng_091311_rIgG_3.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 186 5.05 0.00 1 4 100 4 848.91290 3392.62978 6.14 48.12 6316 6316 MS2 43/174 Linfeng_20120125_PCAF_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 5.05 0.00 2 4 100 4 838.92242 3352.66787 7.14 37.86 4121 4121 MS2 50/180 Linfeng_20120125_PCAF_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 296 5.05 0.00 1 4 100 3 965.80878 2895.41178 7.43 35.11 3506 3506 MS2 36/104 Linfeng_20120125_PCAF_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 255 5.04 0.00 2 39 100 4 838.92352 3352.67226 8.45 37.58 4489 4489 MS2 44/180 Linfeng_20120125_PCAF_6.raw High LASYLDKVQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 244 5.04 0.00 2 7 25 4 832.16315 3325.63076 2.51 43.83 4553 4553 MS2 51/162 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 5.04 0.00 0 5 25 2 793.88831 1586.76933 2.27 19.58 1608 1608 MS2 23/26 Linfeng_122411_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 388 5.03 0.00 1 11 52 3 793.07043 2377.19675 3.57 47.00 7442 7442 MS2 33/80 Linfeng_20120125_PCAF_8.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 5.03 0.00 0 30 25 3 699.01910 2095.04276 2.43 39.07 4072 4072 MS2 35/64 Linfeng_122411_rIgG_4.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 203 5.02 0.00 2 7 100 4 916.44983 3662.77749 6.69 47.97 6471 6471 MS2 42/186 Linfeng_20120125_PCAF_3.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 179 5.02 0.00 1 5 4 4 720.84314 2880.35073 -0.97 3.91 392 392 MS2 41/150 Linfeng_122411_rIgG_7.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 5.01 0.00 1 15 100 3 965.80688 2895.40610 5.47 35.24 3534 3534 MS2 35/104 Linfeng_20120125_PCAF_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 136 5.01 0.00 0 22 100 3 837.38843 2510.15073 7.51 41.05 4816 4816 MS2 38/88 Linfeng_20120125_PCAF_3.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 5.00 0.00 0 9 25 2 1048.01978 2095.03227 -2.57 40.25 4818 4818 MS2 25/32 Linfeng_091311_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 5.00 0.00 0 1 25 4 806.57312 3223.27065 -3.44 22.23 2364 2364 MS2 52/234 Linfeng_091311_rIgG_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 166 5.00 0.00 0 2 4 3 1088.84729 3264.52732 4.09 48.52 7133 7133 MS2 33/112 Linfeng_20120125_PCAF_6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 5.00 0.00 1 4 4 3 793.06769 2377.18851 0.10 36.10 3872 3872 MS2 37/80 Linfeng_122411_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 20 4.98 0.00 0 0 25 2 1353.07959 2705.15190 -3.46 36.95 4332 4332 MS2 26/62 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 4.97 0.00 0 77 100 3 902.39337 2705.16556 1.59 43.27 5182 5182 MS2 40/124 Linfeng_20120125_PCAF_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 116 4.97 0.00 0 7 84 3 837.38434 2510.13846 2.63 40.47 5796 5796 MS2 38/88 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.97 0.00 0 0 25 4 806.57849 3223.29213 3.22 21.05 1687 1687 MS2 58/234 Linfeng_122411_rIgG_2.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 359 4.96 0.00 0 9 25 3 699.01904 2095.04258 2.34 39.29 3965 3965 MS2 33/64 Linfeng_122411_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 4.95 0.00 0 5 100 3 837.38873 2510.15165 7.88 42.08 5054 5054 MS2 40/88 Linfeng_20120125_PCAF_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 4.95 0.00 0 22 31 3 902.39417 2705.16794 2.47 43.06 6453 6453 MS2 44/124 Linfeng_20120125_PCAF_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 138 4.95 0.00 0 21 100 3 837.38879 2510.15183 7.95 40.93 4788 4788 MS2 38/88 Linfeng_20120125_PCAF_3.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 4.94 0.00 1 7 18 4 848.90857 3392.61245 1.03 37.86 3403 3403 MS2 42/174 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 136 4.93 0.00 0 20 100 3 837.38818 2510.15000 7.22 40.90 5006 5006 MS2 38/88 Linfeng_20120125_PCAF_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 4.91 0.00 0 0 100 2 1255.57935 2510.15141 7.79 41.57 5168 5168 MS2 23/44 Linfeng_20120125_PCAF_9.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 273 4.91 0.00 1 12 100 3 656.02954 1966.07407 6.92 48.09 6521 6521 MS2 35/64 Linfeng_20120125_PCAF_7.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 4.90 0.00 1 4 60 3 793.07214 2377.20188 5.73 46.39 7288 7288 MS2 35/80 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 320 4.88 0.00 0 37 25 2 919.48480 1837.96233 -1.72 38.31 4450 4450 MS2 23/30 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 15 4.88 0.00 0 0 25 2 896.36707 1791.72685 -0.53 17.36 1637 1637 MS2 27/44 Linfeng_091311_rIgG_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 114 4.87 0.00 0 0 100 2 1255.57935 2510.15141 7.79 41.58 5433 5433 MS2 23/44 Linfeng_20120125_PCAF_6.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 191 4.87 0.00 1 9 25 4 848.91028 3392.61928 3.05 37.99 3797 3797 MS2 47/174 Linfeng_122411_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 122 4.87 0.00 0 24 36 3 837.38599 2510.14341 4.60 40.79 5881 5881 MS2 41/88 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 4.87 0.00 0 40 100 3 613.32935 1837.97348 4.35 48.38 6570 6570 MS2 29/60 Linfeng_20120125_PCAF_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 4.86 0.00 0 22 100 3 837.38904 2510.15256 8.24 40.75 5058 5058 MS2 33/88 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.84 0.00 0 0 12 2 1353.07935 2705.15141 -3.64 37.01 4110 4110 MS2 27/62 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 275 4.84 0.00 1 29 100 3 656.02972 1966.07462 7.20 48.10 7729 7729 MS2 37/64 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 20 4.84 0.00 0 0 25 2 1353.07874 2705.15019 -4.09 36.97 4392 4392 MS2 25/62 Linfeng_091311_rIgG_2.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.84 0.00 1 11 100 3 656.02942 1966.07370 6.74 48.05 7005 7005 MS2 35/64 Linfeng_20120125_PCAF_6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 4.83 0.00 0 6 25 3 597.91589 1791.73313 2.97 16.45 1216 1216 MS2 43/88 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 364 4.83 0.00 0 4 100 3 613.32953 1837.97403 4.65 48.38 6765 6765 MS2 31/60 Linfeng_20120125_PCAF_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 4.83 0.00 0 8 8 3 613.32379 1837.95682 -4.72 37.99 4524 4524 MS2 32/60 Linfeng_091311_rIgG_2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 4.83 0.00 1 11 25 3 697.96558 2091.88218 -0.12 15.56 1390 1390 MS2 43/100 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 387 4.82 0.00 0 4 3 3 613.32947 1837.97385 4.55 48.40 7527 7527 MS2 32/60 Linfeng_20120125_PCAF_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 4.82 0.00 0 16 25 3 613.32483 1837.95993 -3.02 38.21 4474 4474 MS2 30/60 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 4.81 0.00 0 0 25 2 1353.08069 2705.15410 -2.64 37.05 4327 4327 MS2 27/62 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 4.81 0.00 0 25 86 3 902.39368 2705.16648 1.93 43.32 6521 6521 MS2 42/124 Linfeng_20120125_PCAF_8.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 202 4.81 0.00 2 9 100 4 916.44989 3662.77773 6.75 48.06 7008 7008 MS2 44/186 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 4.80 0.00 0 50 100 2 793.89063 1586.77397 5.19 27.29 2145 2145 MS2 23/26 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 136 4.77 0.00 0 16 100 3 837.38831 2510.15036 7.37 40.90 5269 5269 MS2 34/88 Linfeng_20120125_PCAF_6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 4.77 0.00 1 30 100 3 793.07294 2377.20426 6.73 47.31 6827 6827 MS2 32/80 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 263 4.76 0.00 0 5 12 3 529.59082 1586.75791 -4.93 26.68 3020 3020 MS2 29/52 Linfeng_091311_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 4.75 0.00 0 9 8 3 613.32471 1837.95957 -3.22 38.04 4251 4251 MS2 30/60 Linfeng_091311_rIgG_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 245 4.75 0.00 2 22 100 4 838.91895 3352.65395 2.99 37.37 4442 4442 MS2 58/180 Linfeng_20120125_PCAF_6.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 4.75 0.00 1 9 100 3 656.02832 1966.07041 5.06 48.14 7456 7456 MS2 33/64 Linfeng_20120125_PCAF_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 140 4.74 0.00 0 5 100 3 837.38757 2510.14817 6.49 40.94 4695 4695 MS2 40/88 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 4.74 0.00 0 12 25 3 529.59058 1586.75718 -5.39 27.01 2989 2989 MS2 30/52 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 4.73 0.00 0 4 25 3 529.59076 1586.75772 -5.05 26.95 3005 3005 MS2 29/52 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 294 4.73 0.00 2 40 100 3 888.44495 2663.32029 9.55 48.10 6313 6313 MS2 31/84 Linfeng_20120125_PCAF_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 354 4.73 0.00 0 0 13 3 613.32935 1837.97348 4.35 48.39 7806 7806 MS2 31/60 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 4.72 0.00 0 2 32 3 613.32880 1837.97184 3.45 48.39 6594 6594 MS2 31/60 Linfeng_20120125_PCAF_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 74 4.72 0.00 0 0 16 2 1255.56445 2510.12163 -4.08 34.36 3743 3743 MS2 25/44 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 318 4.72 0.00 0 22 25 2 919.48279 1837.95830 -3.91 38.12 4541 4541 MS2 24/30 Linfeng_091311_rIgG_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 364 4.71 0.00 1 4 15 3 793.06409 2377.17771 -4.44 36.91 4327 4327 MS2 36/80 Linfeng_091311_rIgG_4.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 194 4.71 0.00 1 2 14 4 720.84583 2880.36147 2.76 34.15 3335 3335 MS2 44/150 Linfeng_122411_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 4.71 0.00 2 2 100 4 838.92230 3352.66738 6.99 38.52 4709 4709 MS2 54/180 Linfeng_20120125_PCAF_6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 4.71 0.00 0 22 25 3 597.91644 1791.73478 3.89 16.30 1327 1327 MS2 40/88 Linfeng_122411_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 5 25 2 896.36633 1791.72539 -1.35 17.20 1688 1688 MS2 23/44 Linfeng_091311_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 130 4.70 0.00 0 5 9 4 816.88275 3264.50918 -1.47 42.86 5055 5055 MS2 41/168 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.70 0.00 0 1 25 4 806.57843 3223.29189 3.15 21.12 1548 1548 MS2 50/234 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 32 4.70 0.00 0 9 100 3 902.39215 2705.16190 0.24 43.74 5297 5297 MS2 39/124 Linfeng_20120125_PCAF_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 4.69 0.00 0 4 100 2 1353.08679 2705.16631 1.87 43.43 5390 5390 MS2 25/62 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 4.68 0.00 1 6 100 3 656.02960 1966.07425 7.01 48.17 6713 6713 MS2 33/64 Linfeng_20120125_PCAF_9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 4.68 0.00 1 2 91 3 793.07300 2377.20444 6.81 46.13 7225 7225 MS2 33/80 Linfeng_20120125_PCAF_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 4.68 0.00 0 2 25 2 896.37085 1791.73442 3.70 16.28 1325 1325 MS2 23/44 Linfeng_122411_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 4.67 0.00 1 15 25 3 793.06909 2377.19272 1.88 35.49 3105 3105 MS2 33/80 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.66 0.00 0 1 25 2 896.36609 1791.72490 -1.62 17.16 1646 1646 MS2 25/44 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 4.63 0.00 0 0 25 2 1353.08691 2705.16655 1.96 36.12 3584 3584 MS2 26/62 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 4.63 0.00 0 31 100 3 837.38892 2510.15219 8.10 40.97 5286 5286 MS2 36/88 Linfeng_20120125_PCAF_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 4.61 0.00 0 0 25 2 1353.08801 2705.16875 2.77 35.45 3100 3100 MS2 23/62 Linfeng_122411_rIgG_7.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 186 4.61 0.00 1 1 39 4 848.91296 3392.63003 6.21 48.12 7021 7021 MS2 43/174 Linfeng_20120125_PCAF_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 4.60 0.00 0 2 19 2 1353.08313 2705.15898 -0.84 36.14 3561 3561 MS2 26/62 Linfeng_122411_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 4.59 0.00 0 16 25 3 597.91553 1791.73203 2.36 16.49 1325 1325 MS2 40/88 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 4.58 0.00 0 4 10 3 529.59094 1586.75827 -4.70 26.83 2729 2729 MS2 28/52 Linfeng_091311_rIgG_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 4.57 0.00 0 11 16 3 699.01538 2095.03159 -2.90 40.22 4814 4814 MS2 31/64 Linfeng_091311_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 4.57 0.00 2 10 100 4 838.92206 3352.66640 6.70 36.74 4881 4881 MS2 51/180 Linfeng_20120125_PCAF_5.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 4.57 0.00 1 33 100 3 793.07178 2377.20078 5.27 47.53 6880 6880 MS2 31/80 Linfeng_20120125_PCAF_6.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 186 4.57 0.00 1 2 100 4 848.91296 3392.63003 6.21 48.13 6704 6704 MS2 46/174 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 327 4.57 0.00 0 45 100 2 793.89063 1586.77397 5.19 27.33 2468 2468 MS2 23/26 Linfeng_20120125_PCAF_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 105 4.57 0.00 0 2 100 2 1255.57861 2510.14995 7.20 41.09 5761 5761 MS2 23/44 Linfeng_20120125_PCAF_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 124 4.56 0.00 0 8 25 3 1088.84045 3264.50681 -2.19 42.88 5049 5049 MS2 34/112 Linfeng_091311_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 4.56 0.00 1 23 25 3 968.14142 2902.40970 -0.31 47.61 5651 5651 MS2 29/96 Linfeng_091311_rIgG_6.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 4.56 0.00 1 19 25 4 720.84570 2880.36098 2.59 34.28 3521 3521 MS2 41/150 Linfeng_122411_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 4.55 0.00 0 1 25 3 837.38257 2510.13315 0.51 33.54 3111 3111 MS2 38/88 Linfeng_122411_rIgG_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 4.55 0.00 0 19 25 3 597.91650 1791.73496 3.99 16.45 1237 1237 MS2 35/88 Linfeng_122411_rIgG_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 4.54 0.00 0 10 100 3 837.38770 2510.14853 6.64 41.96 5966 5966 MS2 40/88 Linfeng_20120125_PCAF_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 142 4.54 0.00 0 23 100 3 837.38885 2510.15201 8.02 47.51 6867 6867 MS2 36/88 Linfeng_20120125_PCAF_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 58 4.53 0.00 0 37 100 3 902.39832 2705.18039 7.08 43.21 5546 5546 MS2 39/124 Linfeng_20120125_PCAF_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 140 4.53 0.00 0 39 100 3 837.38794 2510.14927 6.93 40.22 4935 4935 MS2 34/88 Linfeng_20120125_PCAF_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 329 4.52 0.00 0 26 25 2 919.48407 1837.96086 -2.52 38.26 4498 4498 MS2 23/30 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 54 4.52 0.00 0 38 100 3 902.39685 2705.17600 5.45 45.57 6396 6396 MS2 32/124 Linfeng_20120125_PCAF_10.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 85 4.52 0.00 0 1 25 2 1255.56628 2510.12529 -2.62 34.33 3993 3993 MS2 24/44 Linfeng_091311_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 4.52 0.00 0 6 100 3 613.32935 1837.97348 4.35 48.37 6876 6876 MS2 30/60 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.51 0.00 0 23 25 3 529.59442 1586.76871 1.88 25.69 2400 2400 MS2 29/52 Linfeng_122411_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 4.51 0.00 2 4 100 4 838.92212 3352.66665 6.78 37.83 4293 4293 MS2 49/180 Linfeng_20120125_PCAF_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 4.51 0.00 0 0 100 2 1353.08728 2705.16728 2.23 43.47 5400 5400 MS2 26/62 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 4.51 0.00 0 3 10 3 613.32770 1837.96854 1.66 37.36 3716 3716 MS2 33/60 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 271 4.50 0.00 0 3 1 2 616.80200 1232.59673 -0.94 3.55 358 358 MS2 25/30 Linfeng_122411_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 213 4.50 0.00 1 30 100 3 965.79669 2895.37552 -5.09 34.80 4263 4263 MS2 32/104 Linfeng_20120125_PCAF_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 4.50 0.00 1 21 25 3 968.14014 2902.40586 -1.63 47.12 5443 5443 MS2 31/96 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 374 4.50 0.00 0 15 25 3 613.32526 1837.96122 -2.33 38.06 4474 4474 MS2 31/60 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 4.49 0.00 0 0 100 2 1353.09229 2705.17729 5.93 45.35 6341 6341 MS2 29/62 Linfeng_20120125_PCAF_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.49 0.00 0 0 25 2 896.36578 1791.72429 -1.96 17.39 1723 1723 MS2 25/44 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 284 4.49 0.00 0 2 25 2 793.88837 1586.76946 2.35 25.70 2401 2401 MS2 23/26 Linfeng_122411_rIgG_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 357 4.49 0.00 0 2 10 3 613.32794 1837.96927 2.06 37.35 3740 3740 MS2 31/60 Linfeng_122411_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 338 4.48 0.00 0 13 100 3 529.59698 1586.77640 6.72 25.18 1797 1797 MS2 25/52 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 200 4.47 0.00 1 15 100 3 965.79199 2895.36142 -9.96 35.26 3794 3794 MS2 31/104 Linfeng_20120125_PCAF_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 4.47 0.00 1 2 7 3 968.14270 2902.41355 1.02 46.50 4897 4897 MS2 36/96 Linfeng_122411_rIgG_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 295 4.47 0.00 1 6 100 3 965.80957 2895.41416 8.25 35.35 3723 3723 MS2 30/104 Linfeng_20120125_PCAF_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 156 4.46 0.00 0 3 25 4 816.88641 3264.52382 3.02 41.90 4181 4181 MS2 46/168 Linfeng_122411_rIgG_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.46 0.00 0 7 25 2 793.88226 1586.75725 -5.35 26.68 2976 2976 MS2 23/26 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 4.46 0.00 0 0 100 2 1353.09229 2705.17729 5.93 43.32 5664 5664 MS2 28/62 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 259 4.46 0.00 2 14 100 4 838.92188 3352.66567 6.48 38.43 4689 4689 MS2 51/180 Linfeng_20120125_PCAF_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 4.46 0.00 0 0 100 2 1255.58008 2510.15288 8.37 41.09 5139 5139 MS2 22/44 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 104 4.45 0.00 0 0 100 2 1255.57886 2510.15044 7.40 41.20 5164 5164 MS2 25/44 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.45 0.00 0 0 25 2 793.88470 1586.76213 -2.27 4.77 564 564 MS2 23/26 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 321 4.45 0.00 0 53 100 2 793.89240 1586.77751 7.43 27.34 2130 2130 MS2 23/26 Linfeng_20120125_PCAF_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 4.44 0.00 2 33 100 4 838.92029 3352.65932 4.59 37.98 5031 5031 MS2 44/180 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 276 4.44 0.00 0 4 25 2 793.88953 1586.77178 3.81 20.62 1718 1718 MS2 22/26 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 138 4.43 0.00 0 11 100 3 837.38812 2510.14981 7.15 41.89 5241 5241 MS2 39/88 Linfeng_20120125_PCAF_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 4.43 0.00 2 12 100 4 838.92139 3352.66372 5.90 38.06 4439 4439 MS2 50/180 Linfeng_20120125_PCAF_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.43 0.00 0 14 25 3 597.91357 1791.72617 -0.91 17.36 1638 1638 MS2 42/88 Linfeng_091311_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 60 4.43 0.00 0 21 100 3 902.39880 2705.18186 7.62 43.17 5627 5627 MS2 37/124 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 116 4.43 0.00 0 28 77 3 837.38403 2510.13755 2.26 40.12 5720 5720 MS2 34/88 Linfeng_20120125_PCAF_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 356 4.43 0.00 0 3 25 3 613.32776 1837.96872 1.76 37.21 3320 3320 MS2 30/60 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 241 4.43 0.00 0 13 25 2 793.88196 1586.75664 -5.73 26.90 2977 2977 MS2 23/26 Linfeng_091311_rIgG_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 332 4.42 0.00 0 24 25 2 919.48517 1837.96306 -1.32 38.13 4490 4490 MS2 22/30 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 4.42 0.00 1 4 24 3 968.14246 2902.41281 0.77 46.73 4833 4833 MS2 32/96 Linfeng_122411_rIgG_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 4.41 0.00 0 5 8 3 613.33014 1837.97586 5.64 48.39 7991 7991 MS2 32/60 Linfeng_20120125_PCAF_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.40 0.00 0 5 25 2 896.36700 1791.72673 -0.60 17.42 1669 1669 MS2 26/44 Linfeng_091311_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.40 0.00 1 1 25 3 968.14575 2902.42270 4.17 46.56 4908 4908 MS2 36/96 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 80 4.40 0.00 0 3 7 2 1255.56873 2510.13017 -0.68 3.93 395 395 MS2 25/44 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 104 4.40 0.00 0 0 100 2 1255.57849 2510.14971 7.10 41.00 5741 5741 MS2 24/44 Linfeng_20120125_PCAF_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 4.40 0.00 0 2 100 2 896.37347 1791.73967 6.63 13.78 889 889 MS2 22/44 Linfeng_20120125_PCAF_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.40 0.00 0 0 25 2 896.36768 1791.72807 0.15 17.42 1648 1648 MS2 23/44 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 306 4.39 0.00 0 42 100 2 793.89001 1586.77275 4.42 26.47 2258 2258 MS2 23/26 Linfeng_20120125_PCAF_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 4.39 0.00 0 4 25 2 1048.02051 2095.03374 -1.87 40.23 4753 4753 MS2 26/32 Linfeng_091311_rIgG_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 4.39 0.00 2 9 100 4 838.92236 3352.66762 7.07 38.40 4224 4224 MS2 47/180 Linfeng_20120125_PCAF_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 15 4.38 0.00 0 6 25 2 896.36664 1791.72600 -1.01 17.51 1479 1479 MS2 23/44 Linfeng_091311_rIgG_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 4.37 0.00 2 21 100 4 838.92303 3352.67031 7.87 38.45 4247 4247 MS2 46/180 Linfeng_20120125_PCAF_3.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 348 4.36 0.00 0 3 25 3 699.01587 2095.03305 -2.20 40.18 4747 4747 MS2 33/64 Linfeng_091311_rIgG_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 4.35 0.00 0 7 3 3 613.32629 1837.96433 -0.63 37.29 4037 4037 MS2 30/60 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 4.35 0.00 0 51 100 2 793.89075 1586.77422 5.35 27.26 2161 2161 MS2 23/26 Linfeng_20120125_PCAF_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 4.34 0.00 0 5 8 3 613.32495 1837.96030 -2.82 38.29 4470 4470 MS2 29/60 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 318 4.33 0.00 0 9 100 2 793.89081 1586.77434 5.43 24.37 1701 1701 MS2 22/26 Linfeng_20120125_PCAF_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 4.33 0.00 1 8 100 3 793.07275 2377.20371 6.50 46.26 7255 7255 MS2 35/80 Linfeng_20120125_PCAF_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 4.32 0.00 2 13 100 4 838.92200 3352.66616 6.63 37.17 4986 4986 MS2 51/180 Linfeng_20120125_PCAF_5.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 379 4.32 0.00 1 36 100 3 793.07330 2377.20536 7.19 47.82 6630 6630 MS2 31/80 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 4.31 0.00 0 9 23 3 529.59088 1586.75809 -4.82 26.84 3031 3031 MS2 28/52 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.31 0.00 0 3 21 2 793.88251 1586.75774 -5.04 26.83 3030 3030 MS2 23/26 Linfeng_091311_rIgG_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 4.31 0.00 0 5 100 3 902.39331 2705.16538 1.53 43.86 5796 5796 MS2 39/124 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 4.30 0.00 2 81 100 4 838.92267 3352.66884 7.43 37.66 4077 4077 MS2 46/180 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 4.29 0.00 0 0 25 2 793.88324 1586.75920 -4.11 26.79 3087 3087 MS2 23/26 Linfeng_091311_rIgG_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 4.29 0.00 1 6 25 3 968.14484 2902.41996 3.23 46.68 5075 5075 MS2 27/96 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 4.29 0.00 0 11 25 3 529.59277 1586.76377 -1.24 4.86 577 577 MS2 29/52 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 133 4.29 0.00 0 39 100 3 837.38733 2510.14743 6.20 42.17 6015 6015 MS2 38/88 Linfeng_20120125_PCAF_1.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 4.29 0.00 1 6 100 4 848.91138 3392.62368 4.34 48.12 7452 7452 MS2 42/174 Linfeng_20120125_PCAF_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 4.29 0.00 1 4 25 3 617.98163 1851.93033 1.80 36.24 3600 3600 MS2 31/56 Linfeng_122411_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 4.29 0.00 0 3 100 2 896.37305 1791.73882 6.15 13.42 888 888 MS2 25/44 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 4.29 0.00 0 0 88 2 1353.09070 2705.17412 4.76 43.63 5425 5425 MS2 27/62 Linfeng_20120125_PCAF_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 256 4.28 0.00 1 18 25 3 968.13989 2902.40512 -1.88 47.71 5763 5763 MS2 29/96 Linfeng_091311_rIgG_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 4.28 0.00 2 11 100 4 838.92230 3352.66738 6.99 37.67 4071 4071 MS2 45/180 Linfeng_20120125_PCAF_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 4.28 0.00 0 0 25 2 896.37061 1791.73393 3.42 16.30 1342 1342 MS2 23/44 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 284 4.27 0.00 0 4 19 3 529.59204 1586.76157 -2.62 26.74 2992 2992 MS2 28/52 Linfeng_091311_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.27 0.00 0 5 25 3 529.59003 1586.75553 -6.43 26.91 2978 2978 MS2 27/52 Linfeng_091311_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 147 4.27 0.00 0 1 5 3 1088.84497 3264.52036 1.96 48.53 6641 6641 MS2 29/112 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 4.27 0.00 0 15 18 3 613.32495 1837.96030 -2.82 38.25 4466 4466 MS2 29/60 Linfeng_091311_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.27 0.00 0 11 25 2 896.36633 1791.72539 -1.35 17.09 1648 1648 MS2 24/44 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 4.27 0.00 1 7 11 3 968.14142 2902.40970 -0.31 46.47 5268 5268 MS2 33/96 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 241 4.27 0.00 0 6 25 2 793.88232 1586.75737 -5.27 26.98 2985 2985 MS2 23/26 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 323 4.26 0.00 0 59 100 2 793.89197 1586.77666 6.89 26.56 2385 2385 MS2 22/26 Linfeng_20120125_PCAF_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 110 4.24 0.00 0 0 100 2 1255.57837 2510.14946 7.01 41.29 5100 5100 MS2 25/44 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.24 0.00 0 54 100 2 793.89117 1586.77507 5.89 26.68 1911 1911 MS2 22/26 Linfeng_20120125_PCAF_3.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 4.24 0.00 1 27 100 3 793.07306 2377.20462 6.88 47.72 6722 6722 MS2 31/80 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 250 4.24 0.00 0 22 25 2 793.88330 1586.75932 -4.04 26.87 2943 2943 MS2 23/26 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 4.24 0.00 0 21 25 3 597.91602 1791.73349 3.18 16.33 1345 1345 MS2 41/88 Linfeng_122411_rIgG_5.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 4.23 0.00 1 34 100 3 793.07281 2377.20389 6.58 47.15 7215 7215 MS2 30/80 Linfeng_20120125_PCAF_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.23 0.00 0 17 25 3 597.91345 1791.72580 -1.12 17.46 1654 1654 MS2 35/88 Linfeng_091311_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.22 0.00 0 6 18 3 597.91309 1791.72470 -1.73 17.24 1658 1658 MS2 43/88 Linfeng_091311_rIgG_4.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 4.22 0.00 0 10 25 2 1048.02063 2095.03398 -1.76 40.23 4748 4748 MS2 25/32 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 278 4.22 0.00 0 4 25 3 529.59106 1586.75864 -4.47 26.81 3090 3090 MS2 29/52 Linfeng_091311_rIgG_10.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 353 4.22 0.00 0 35 48 3 613.32782 1837.96891 1.86 48.40 6388 6388 MS2 31/60 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 322 4.20 0.00 0 49 100 2 793.89197 1586.77666 6.89 27.20 2536 2536 MS2 22/26 Linfeng_20120125_PCAF_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.20 0.00 0 4 25 3 597.91321 1791.72507 -1.52 17.48 1711 1711 MS2 45/88 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 314 4.20 0.00 0 70 100 2 793.89087 1586.77446 5.50 26.57 2282 2282 MS2 23/26 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 236 4.20 0.00 0 7 25 2 793.88269 1586.75810 -4.81 26.78 2723 2723 MS2 23/26 Linfeng_091311_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 4.20 0.00 0 3 32 2 793.89270 1586.77812 7.81 25.49 1751 1751 MS2 23/26 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 321 4.19 0.00 0 16 100 2 793.89282 1586.77837 7.96 24.42 1947 1947 MS2 21/26 Linfeng_20120125_PCAF_5.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 4.18 0.00 2 7 100 4 838.92267 3352.66884 7.43 37.44 4457 4457 MS2 58/180 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 4.17 0.00 0 4 15 2 793.89227 1586.77727 7.27 25.45 2037 2037 MS2 23/26 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 319 4.17 0.00 0 43 100 2 793.89099 1586.77471 5.66 26.53 2039 2039 MS2 22/26 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 4.17 0.00 0 3 20 2 793.89185 1586.77641 6.73 25.38 1828 1828 MS2 23/26 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 4.16 0.00 2 19 100 4 838.92316 3352.67080 8.01 38.55 4267 4267 MS2 47/180 Linfeng_20120125_PCAF_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 4.15 0.00 0 0 100 2 1353.08813 2705.16899 2.86 43.78 5463 5463 MS2 27/62 Linfeng_20120125_PCAF_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.15 0.00 0 7 25 2 896.36713 1791.72698 -0.46 17.37 1696 1696 MS2 24/44 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 4.15 0.00 0 13 100 3 902.39288 2705.16410 1.05 43.95 5505 5505 MS2 35/124 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 341 4.14 0.00 0 26 100 3 529.59613 1586.77384 5.11 25.74 1820 1820 MS2 28/52 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 4.14 0.00 0 1 100 2 793.89185 1586.77641 6.73 25.79 1894 1894 MS2 23/26 Linfeng_20120125_PCAF_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.14 0.00 0 0 25 2 896.36639 1791.72551 -1.28 17.35 1753 1753 MS2 26/44 Linfeng_091311_rIgG_10.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 4.14 0.00 0 3 12 3 613.32806 1837.96964 2.26 37.33 3853 3853 MS2 29/60 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 4.13 0.00 0 0 100 2 1353.08887 2705.17046 3.40 43.37 5206 5206 MS2 27/62 Linfeng_20120125_PCAF_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 379 4.13 0.00 1 20 25 4 595.05383 2377.19350 2.20 35.62 3121 3121 MS2 41/120 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 4.13 0.00 0 2 72 2 793.89197 1586.77666 6.89 25.74 2070 2070 MS2 23/26 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 321 4.13 0.00 0 4 37 2 793.89246 1586.77764 7.50 25.38 1742 1742 MS2 23/26 Linfeng_20120125_PCAF_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 4.13 0.00 2 15 100 4 838.92139 3352.66372 5.90 37.63 4070 4070 MS2 44/180 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 4.13 0.00 0 3 33 2 793.89252 1586.77776 7.58 25.37 2094 2094 MS2 23/26 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 4.12 0.00 0 0 100 2 1353.08899 2705.17070 3.49 43.23 6271 6271 MS2 29/62 Linfeng_20120125_PCAF_1.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 293 4.12 0.00 1 38 25 3 656.02667 1966.06546 2.54 31.27 2573 2573 MS2 29/64 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 313 4.12 0.00 0 4 55 2 793.89258 1586.77788 7.66 25.40 1894 1894 MS2 23/26 Linfeng_20120125_PCAF_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 4.12 0.00 0 4 3 2 616.80029 1232.59331 -3.72 2.16 282 282 MS2 26/30 Linfeng_091311_rIgG_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 4.11 0.00 2 8 100 4 838.92255 3352.66836 7.29 37.59 4053 4053 MS2 49/180 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 4.11 0.00 0 13 19 3 613.32446 1837.95884 -3.62 38.22 4547 4547 MS2 29/60 Linfeng_091311_rIgG_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 4.11 0.00 2 12 100 4 838.92224 3352.66713 6.92 37.01 4947 4947 MS2 48/180 Linfeng_20120125_PCAF_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 276 4.11 0.00 0 20 25 3 529.59027 1586.75626 -5.97 26.69 2977 2977 MS2 26/52 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 320 4.11 0.00 0 33 100 2 793.89221 1586.77715 7.19 27.60 2209 2209 MS2 23/26 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 229 4.10 0.00 0 20 25 2 793.88263 1586.75798 -4.88 26.91 3000 3000 MS2 23/26 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 294 4.10 0.00 2 3 100 3 888.44250 2663.31296 6.80 48.11 7018 7018 MS2 25/84 Linfeng_20120125_PCAF_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 4.10 0.00 0 20 100 3 902.39319 2705.16501 1.39 43.96 5821 5821 MS2 35/124 Linfeng_20120125_PCAF_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 356 4.08 0.00 0 2 25 3 613.32782 1837.96891 1.86 37.64 3940 3940 MS2 30/60 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 270 4.08 0.00 0 22 15 3 529.59167 1586.76047 -3.32 26.93 2950 2950 MS2 25/52 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.08 0.00 0 4 18 3 597.91278 1791.72379 -2.24 17.29 1701 1701 MS2 41/88 Linfeng_091311_rIgG_2.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 179 4.07 0.00 1 15 40 4 848.91241 3392.62783 5.57 48.15 7929 7929 MS2 42/174 Linfeng_20120125_PCAF_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 66 4.07 0.00 0 47 100 3 902.39948 2705.18387 8.36 45.26 6320 6320 MS2 31/124 Linfeng_20120125_PCAF_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 4.07 0.00 0 0 66 2 1353.08813 2705.16899 2.86 42.93 6458 6458 MS2 25/62 Linfeng_20120125_PCAF_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.06 0.00 0 12 25 2 793.88245 1586.75762 -5.11 26.62 2976 2976 MS2 23/26 Linfeng_091311_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.05 0.00 0 2 25 4 806.57861 3223.29262 3.37 21.13 1665 1665 MS2 47/234 Linfeng_122411_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 4.05 0.00 0 3 100 2 896.37292 1791.73857 6.01 13.70 1006 1006 MS2 25/44 Linfeng_20120125_PCAF_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 4.04 0.00 0 0 100 2 1353.08777 2705.16826 2.59 43.34 5368 5368 MS2 27/62 Linfeng_20120125_PCAF_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 238 4.04 0.00 0 3 25 2 793.88226 1586.75725 -5.35 26.64 3014 3014 MS2 23/26 Linfeng_091311_rIgG_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 4.04 0.00 0 23 25 2 616.80090 1232.59453 -2.73 19.42 2003 2003 MS2 26/30 Linfeng_091311_rIgG_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.04 0.00 1 0 25 3 968.14496 2902.42032 3.35 46.47 5003 5003 MS2 35/96 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.04 0.00 2 19 20 4 666.57666 2663.28481 -3.77 37.90 4512 4512 MS2 34/126 Linfeng_091311_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 313 4.03 0.00 0 2 35 2 793.89227 1586.77727 7.27 25.44 2141 2141 MS2 23/26 Linfeng_20120125_PCAF_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 38 4.02 0.00 0 0 100 2 1353.08838 2705.16948 3.04 43.57 5914 5914 MS2 26/62 Linfeng_20120125_PCAF_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 110 4.02 0.00 0 0 100 2 1255.57886 2510.15044 7.40 41.25 5799 5799 MS2 25/44 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 319 4.02 0.00 0 49 100 2 793.89178 1586.77629 6.66 27.35 2026 2026 MS2 23/26 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 4.00 0.00 0 7 100 3 529.59662 1586.77530 6.03 26.15 1939 1939 MS2 27/52 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 4.00 0.00 0 0 100 2 1353.09241 2705.17754 6.02 42.78 6416 6416 MS2 26/62 Linfeng_20120125_PCAF_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 139 4.00 0.00 0 24 100 3 837.38788 2510.14908 6.86 47.35 6829 6829 MS2 34/88 Linfeng_20120125_PCAF_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 272 4.00 0.00 0 12 25 2 616.80133 1232.59538 -2.03 19.53 2065 2065 MS2 27/30 Linfeng_091311_rIgG_10.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.99 0.00 2 11 100 4 838.92242 3352.66787 7.14 38.17 4188 4188 MS2 53/180 Linfeng_20120125_PCAF_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 137 3.99 0.00 0 37 100 3 837.38824 2510.15018 7.29 40.25 4941 4941 MS2 34/88 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.98 0.00 2 7 100 4 838.92291 3352.66982 7.72 38.44 4234 4234 MS2 50/180 Linfeng_20120125_PCAF_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 327 3.98 0.00 0 30 100 3 529.59589 1586.77311 4.65 25.83 1838 1838 MS2 28/52 Linfeng_20120125_PCAF_9.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 344 3.98 0.00 0 13 22 3 699.01593 2095.03324 -2.11 40.39 4721 4721 MS2 34/64 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 3.97 0.00 0 13 27 2 919.48956 1837.97185 3.46 48.44 7821 7821 MS2 23/30 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 3.97 0.00 0 0 100 2 1353.08716 2705.16704 2.14 43.37 5359 5359 MS2 26/62 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 3.97 0.00 0 6 100 2 793.89203 1586.77678 6.96 26.39 1976 1976 MS2 23/26 Linfeng_20120125_PCAF_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 271 3.97 0.00 0 16 25 2 616.80151 1232.59575 -1.74 19.62 1978 1978 MS2 24/30 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 328 3.96 0.00 0 24 100 2 793.89233 1586.77739 7.35 26.50 1882 1882 MS2 23/26 Linfeng_20120125_PCAF_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 110 3.96 0.00 0 0 100 2 1255.57983 2510.15239 8.17 41.25 4862 4862 MS2 25/44 Linfeng_20120125_PCAF_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 122 3.95 0.00 0 0 100 2 1255.58130 2510.15532 9.34 41.99 5346 5346 MS2 23/44 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 209 3.95 0.00 1 17 100 3 845.74207 2535.21164 4.64 48.32 7070 7070 MS2 25/80 Linfeng_20120125_PCAF_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 3.95 0.00 0 0 100 2 1353.08655 2705.16582 1.69 43.01 6480 6480 MS2 25/62 Linfeng_20120125_PCAF_5.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 3.95 0.00 2 27 100 4 838.92395 3352.67397 8.96 38.45 4526 4526 MS2 47/180 Linfeng_20120125_PCAF_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 30 3.95 0.00 0 6 100 2 896.37390 1791.74053 7.10 13.75 988 988 MS2 22/44 Linfeng_20120125_PCAF_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 109 3.94 0.00 0 0 100 2 1255.57886 2510.15044 7.40 41.21 4752 4752 MS2 23/44 Linfeng_20120125_PCAF_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 56 3.94 0.00 0 32 100 3 902.39734 2705.17746 5.99 43.20 5319 5319 MS2 36/124 Linfeng_20120125_PCAF_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 3.93 0.00 0 13 81 2 1353.08850 2705.16973 3.13 43.07 6455 6455 MS2 25/62 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 273 3.93 0.00 1 9 100 3 656.02948 1966.07389 6.83 48.14 6820 6820 MS2 37/64 Linfeng_20120125_PCAF_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 104 3.93 0.00 0 0 100 2 1255.57898 2510.15068 7.49 41.82 5225 5225 MS2 22/44 Linfeng_20120125_PCAF_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 371 3.93 0.00 0 6 100 3 613.32861 1837.97129 3.15 43.50 5707 5707 MS2 25/60 Linfeng_20120125_PCAF_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 258 3.93 0.00 1 26 25 3 968.13995 2902.40531 -1.82 47.72 5655 5655 MS2 32/96 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.93 0.00 0 2 81 2 793.89142 1586.77556 6.19 25.65 2107 2107 MS2 23/26 Linfeng_20120125_PCAF_10.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.92 0.00 2 10 100 4 838.92242 3352.66787 7.14 38.08 4168 4168 MS2 51/180 Linfeng_20120125_PCAF_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.91 0.00 2 10 100 4 838.92267 3352.66884 7.43 37.39 4446 4446 MS2 47/180 Linfeng_20120125_PCAF_6.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 44 3.91 0.00 1 0 25 3 733.65125 2198.93918 -2.50 20.98 2196 2196 MS2 39/96 Linfeng_091311_rIgG_6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 3.89 0.00 1 27 100 3 793.07294 2377.20426 6.73 47.48 6164 6164 MS2 27/80 Linfeng_20120125_PCAF_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 272 3.88 0.00 0 5 25 2 616.80127 1232.59526 -2.13 19.33 1951 1951 MS2 27/30 Linfeng_091311_rIgG_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 322 3.88 0.00 0 24 25 2 616.80481 1232.60234 3.61 18.49 1505 1505 MS2 21/30 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 3.87 0.00 0 0 100 2 1353.08948 2705.17168 3.85 43.67 5750 5750 MS2 27/62 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 3.87 0.00 0 0 25 2 1353.08911 2705.17095 3.58 36.16 3706 3706 MS2 23/62 Linfeng_122411_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 3.87 0.00 0 18 25 3 597.91278 1791.72379 -2.24 17.42 1727 1727 MS2 42/88 Linfeng_091311_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 3.85 0.00 0 4 25 2 896.37048 1791.73369 3.29 16.40 1212 1212 MS2 25/44 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 38 3.85 0.00 0 0 100 2 1353.09033 2705.17339 4.49 43.48 5610 5610 MS2 25/62 Linfeng_20120125_PCAF_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 117 3.84 0.00 0 0 100 2 1255.57959 2510.15190 7.98 41.49 5412 5412 MS2 23/44 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 3.83 0.00 0 44 25 2 793.89032 1586.77336 4.81 21.66 1829 1829 MS2 18/26 Linfeng_122411_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 3.82 0.00 0 5 25 3 613.32764 1837.96836 1.56 37.60 3629 3629 MS2 27/60 Linfeng_122411_rIgG_10.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 3.81 0.00 0 72 23 3 699.01581 2095.03287 -2.29 40.33 4560 4560 MS2 30/64 Linfeng_091311_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.81 0.00 0 20 100 2 793.89130 1586.77532 6.04 24.37 1632 1632 MS2 22/26 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 3.81 0.00 0 8 100 2 793.89038 1586.77349 4.89 26.39 1963 1963 MS2 23/26 Linfeng_20120125_PCAF_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 3.81 0.00 0 3 100 3 837.38794 2510.14927 6.93 40.92 5097 5097 MS2 34/88 Linfeng_20120125_PCAF_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 240 3.80 0.00 0 17 25 2 616.80005 1232.59282 -4.11 19.50 1943 1943 MS2 26/30 Linfeng_091311_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 314 3.80 0.00 0 41 100 2 793.89130 1586.77532 6.04 24.74 1909 1909 MS2 21/26 Linfeng_20120125_PCAF_6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 3.80 0.00 0 0 100 2 896.37299 1791.73870 6.08 14.02 1153 1153 MS2 23/44 Linfeng_20120125_PCAF_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 250 3.80 0.00 1 9 18 3 968.13892 2902.40219 -2.89 47.68 5648 5648 MS2 30/96 Linfeng_091311_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.79 0.00 0 0 25 2 793.88934 1586.77141 3.58 25.84 1961 1961 MS2 20/26 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 28 3.79 0.00 0 0 100 2 1353.08508 2705.16289 0.61 43.79 5778 5778 MS2 28/62 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 3.78 0.00 0 32 100 2 793.89124 1586.77519 5.96 27.41 2188 2188 MS2 22/26 Linfeng_20120125_PCAF_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNKTLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 205 3.78 0.00 2 17 25 4 986.74823 3943.97109 3.80 48.82 5193 5193 MS2 36/198 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 3.78 0.00 0 0 100 2 1353.09167 2705.17607 5.48 43.21 5824 5824 MS2 27/62 Linfeng_20120125_PCAF_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 3.78 0.00 0 0 25 4 806.57831 3223.29140 2.99 20.97 1776 1776 MS2 47/234 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 296 3.77 0.00 0 46 100 2 793.89154 1586.77580 6.35 27.71 2231 2231 MS2 22/26 Linfeng_20120125_PCAF_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 52 3.77 0.00 0 0 100 2 1353.09412 2705.18096 7.28 45.62 6408 6408 MS2 26/62 Linfeng_20120125_PCAF_10.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.76 0.00 2 11 100 4 838.92230 3352.66738 6.99 38.29 4202 4202 MS2 48/180 Linfeng_20120125_PCAF_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 3.75 0.00 0 12 25 2 616.80103 1232.59477 -2.53 19.28 1957 1957 MS2 25/30 Linfeng_091311_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 298 3.75 0.00 0 12 100 2 793.89166 1586.77605 6.50 24.76 1768 1768 MS2 22/26 Linfeng_20120125_PCAF_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 113 3.75 0.00 0 0 25 3 837.38544 2510.14176 3.94 33.46 2419 2419 MS2 29/88 Linfeng_122411_rIgG_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 113 3.75 0.00 0 0 100 2 1255.58032 2510.15337 8.56 41.26 5356 5356 MS2 24/44 Linfeng_20120125_PCAF_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 255 3.73 0.00 1 17 22 3 968.13965 2902.40439 -2.14 47.37 5723 5723 MS2 30/96 Linfeng_091311_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 299 3.73 0.00 0 52 100 2 793.89172 1586.77617 6.58 27.17 2527 2527 MS2 21/26 Linfeng_20120125_PCAF_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.72 0.00 0 12 25 3 529.59424 1586.76816 1.53 20.74 1729 1729 MS2 28/52 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 3.71 0.00 0 21 100 2 793.89191 1586.77654 6.81 26.41 2022 2022 MS2 21/26 Linfeng_20120125_PCAF_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 3.71 0.00 1 22 25 3 968.13879 2902.40183 -3.02 47.46 5659 5659 MS2 29/96 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 314 3.71 0.00 0 54 100 2 793.89142 1586.77556 6.19 24.44 1830 1830 MS2 23/26 Linfeng_20120125_PCAF_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.71 0.00 0 7 25 2 896.37067 1791.73406 3.49 16.58 1305 1305 MS2 20/44 Linfeng_122411_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 340 3.70 0.00 0 8 100 3 529.59619 1586.77402 5.22 25.62 1928 1928 MS2 24/52 Linfeng_20120125_PCAF_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 3.70 0.00 0 5 100 2 1353.08936 2705.17143 3.76 43.54 5624 5624 MS2 25/62 Linfeng_20120125_PCAF_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 258 3.69 0.00 2 21 100 4 838.92407 3352.67446 9.11 37.67 4259 4259 MS2 39/180 Linfeng_20120125_PCAF_9.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 206 3.68 0.00 2 4 25 5 733.35797 3662.76075 2.12 36.94 3688 3688 MS2 51/248 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 3.68 0.00 1 23 25 3 656.02368 1966.05649 -2.02 35.92 4208 4208 MS2 29/64 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.67 0.00 1 5 25 4 726.35742 2902.40786 -0.94 47.79 5664 5664 MS2 33/144 Linfeng_091311_rIgG_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 273 3.67 0.00 0 27 25 2 616.80054 1232.59380 -3.32 19.57 2032 2032 MS2 27/30 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 3.67 0.00 0 28 100 2 793.89288 1586.77849 8.04 24.48 1632 1632 MS2 21/26 Linfeng_20120125_PCAF_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 35 3.66 0.00 0 0 100 2 1353.08862 2705.16997 3.22 43.67 5280 5280 MS2 25/62 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.66 0.00 0 15 25 3 529.59448 1586.76889 1.99 19.72 1620 1620 MS2 26/52 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 323 3.64 0.00 0 25 100 2 793.89203 1586.77678 6.96 24.39 1767 1767 MS2 19/26 Linfeng_20120125_PCAF_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 3.64 0.00 0 10 16 3 613.32452 1837.95902 -3.52 38.17 4431 4431 MS2 28/60 Linfeng_091311_rIgG_5.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.64 0.00 2 18 100 4 838.92242 3352.66787 7.14 37.85 4999 4999 MS2 41/180 Linfeng_20120125_PCAF_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 269 3.64 0.00 1 1 17 4 726.35748 2902.40810 -0.86 47.54 5669 5669 MS2 34/144 Linfeng_091311_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.63 0.00 2 14 100 4 838.92291 3352.66982 7.72 38.27 4209 4209 MS2 44/180 Linfeng_20120125_PCAF_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.63 0.00 0 43 25 2 616.80023 1232.59319 -3.82 19.62 1961 1961 MS2 26/30 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 3.63 0.00 0 0 25 2 793.88922 1586.77117 3.42 18.54 1512 1512 MS2 20/26 Linfeng_122411_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 258 3.62 0.00 2 7 100 4 838.92157 3352.66445 6.12 37.75 4097 4097 MS2 48/180 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.62 0.00 0 9 100 2 793.89172 1586.77617 6.58 24.64 1986 1986 MS2 21/26 Linfeng_20120125_PCAF_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.60 0.00 0 21 25 3 529.59473 1586.76963 2.45 16.61 1352 1352 MS2 25/52 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.60 0.00 0 2 25 2 793.88574 1586.76421 -0.96 4.17 454 454 MS2 22/26 Linfeng_122411_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 299 3.59 0.00 1 31 100 4 724.60748 2895.40810 6.16 35.12 3672 3672 MS2 36/156 Linfeng_20120125_PCAF_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 3.59 0.00 0 6 25 2 896.37109 1791.73491 3.97 16.45 1322 1322 MS2 19/44 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 42 3.59 0.00 0 23 100 3 902.39526 2705.17124 3.69 43.80 6411 6411 MS2 32/124 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.58 0.00 0 0 19 2 793.88562 1586.76396 -1.11 4.23 463 463 MS2 23/26 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 338 3.58 0.00 0 27 100 3 529.59729 1586.77732 7.30 25.17 1974 1974 MS2 28/52 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 327 3.57 0.00 0 39 100 2 793.89221 1586.77715 7.19 27.41 2585 2585 MS2 19/26 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 3.56 0.00 0 26 100 2 1353.08936 2705.17143 3.76 43.30 6515 6515 MS2 21/62 Linfeng_20120125_PCAF_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 3.56 0.00 1 11 25 3 968.14081 2902.40787 -0.94 47.36 5648 5648 MS2 32/96 Linfeng_091311_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 3.55 0.00 0 0 100 2 896.37299 1791.73870 6.08 13.76 863 863 MS2 24/44 Linfeng_20120125_PCAF_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 142 3.55 0.00 0 24 100 3 837.38757 2510.14817 6.49 42.00 5533 5533 MS2 34/88 Linfeng_20120125_PCAF_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 3.55 0.00 2 16 100 4 838.92249 3352.66811 7.21 37.91 4403 4403 MS2 47/180 Linfeng_20120125_PCAF_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 3.55 0.00 0 17 25 3 597.91339 1791.72562 -1.22 17.14 1654 1654 MS2 40/88 Linfeng_091311_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 3.55 0.00 0 18 100 3 902.39374 2705.16666 2.00 44.05 5844 5844 MS2 31/124 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 3.55 0.00 0 41 100 3 529.59686 1586.77604 6.49 25.51 1768 1768 MS2 25/52 Linfeng_20120125_PCAF_9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 3.54 0.00 1 13 25 3 793.06409 2377.17771 -4.44 37.05 4288 4288 MS2 33/80 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 3.54 0.00 0 0 100 2 896.37317 1791.73906 6.28 13.40 934 934 MS2 22/44 Linfeng_20120125_PCAF_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 33 3.53 0.00 0 12 100 2 1353.08752 2705.16777 2.41 43.02 6443 6443 MS2 24/62 Linfeng_20120125_PCAF_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 3.53 0.00 1 41 25 3 968.14142 2902.40970 -0.31 51.41 6153 6153 MS2 25/96 Linfeng_091311_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 298 3.52 0.00 1 3 9 4 726.35913 2902.41469 1.41 46.51 4898 4898 MS2 34/144 Linfeng_122411_rIgG_3.raw High IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 405 3.52 0.00 2 38 100 3 587.65295 1760.94431 6.38 29.70 2757 2757 MS2 23/56 Linfeng_20120125_PCAF_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 3.51 0.00 1 13 100 4 724.60852 2895.41225 7.60 35.10 3757 3757 MS2 40/156 Linfeng_20120125_PCAF_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.51 0.00 2 8 100 4 838.92261 3352.66860 7.36 37.77 4281 4281 MS2 46/180 Linfeng_20120125_PCAF_9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.51 0.00 1 5 25 4 726.35730 2902.40737 -1.11 47.76 5662 5662 MS2 35/144 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 333 3.50 0.00 0 30 100 2 793.89221 1586.77715 7.19 24.37 1877 1877 MS2 20/26 Linfeng_20120125_PCAF_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 3.49 0.00 0 10 25 4 806.57886 3223.29360 3.68 21.12 1560 1560 MS2 44/234 Linfeng_122411_rIgG_9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 3.49 0.00 1 20 100 3 793.07007 2377.19565 3.11 47.11 7472 7472 MS2 33/80 Linfeng_20120125_PCAF_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 294 3.49 0.00 0 15 100 2 793.89014 1586.77300 4.58 11.45 911 911 MS2 23/26 Linfeng_20120125_PCAF_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 306 3.48 0.00 1 6 25 3 968.14471 2902.41959 3.10 46.67 4512 4512 MS2 25/96 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.48 0.00 0 0 25 2 896.37103 1791.73479 3.90 16.39 1210 1210 MS2 22/44 Linfeng_122411_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 3.46 0.00 0 3 100 2 793.89087 1586.77446 5.50 1.69 163 163 MS2 21/26 Linfeng_20120125_PCAF_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 309 3.45 0.00 1 0 25 4 726.36047 2902.42006 3.26 46.48 5005 5005 MS2 35/144 Linfeng_122411_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 3.45 0.00 0 23 25 3 613.32495 1837.96030 -2.82 38.25 4622 4622 MS2 27/60 Linfeng_091311_rIgG_10.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.45 0.00 2 20 22 4 666.57629 2663.28335 -4.32 38.05 4454 4454 MS2 36/126 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 294 3.45 0.00 2 38 100 4 666.58368 2663.31289 6.77 48.07 7910 7910 MS2 41/126 Linfeng_20120125_PCAF_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.45 0.00 0 16 25 2 616.80164 1232.59599 -1.54 19.55 1999 1999 MS2 24/30 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 286 3.44 0.00 0 0 100 2 793.88892 1586.77056 3.04 0.85 63 63 MS2 19/26 Linfeng_20120125_PCAF_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 342 3.44 0.00 0 6 25 2 616.80450 1232.60173 3.12 18.49 1356 1356 MS2 21/30 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 3.42 0.00 0 14 100 3 529.59735 1586.77750 7.42 25.29 2002 2002 MS2 24/52 Linfeng_20120125_PCAF_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 3.42 0.00 1 9 22 4 726.35712 2902.40664 -1.36 47.74 5767 5767 MS2 32/144 Linfeng_091311_rIgG_8.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 30 3.42 0.00 1 29 25 3 697.96436 2091.87851 -1.87 15.56 1457 1457 MS2 35/100 Linfeng_091311_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 255 3.42 0.00 2 12 100 4 838.92346 3352.67202 8.38 38.85 4785 4785 MS2 46/180 Linfeng_20120125_PCAF_6.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 3.41 0.00 1 19 25 3 697.96466 2091.87943 -1.43 15.61 1469 1469 MS2 37/100 Linfeng_091311_rIgG_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 3.40 0.00 2 25 100 4 838.92273 3352.66909 7.50 36.52 4830 4830 MS2 42/180 Linfeng_20120125_PCAF_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 3.40 0.00 1 5 16 4 726.35760 2902.40859 -0.69 47.22 5457 5457 MS2 38/144 Linfeng_091311_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 313 3.39 0.00 0 12 100 3 529.59692 1586.77622 6.61 26.09 2169 2169 MS2 23/52 Linfeng_20120125_PCAF_1.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 57 3.39 0.00 1 11 25 3 733.65442 2198.94870 1.83 19.98 1664 1664 MS2 31/96 Linfeng_122411_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.39 0.00 2 2 100 4 838.92242 3352.66787 7.14 38.21 4184 4184 MS2 46/180 Linfeng_20120125_PCAF_7.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 181 3.39 0.00 1 9 25 4 720.84241 2880.34780 -1.98 34.66 4037 4037 MS2 37/150 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.38 0.00 0 0 100 2 793.89044 1586.77361 4.96 2.01 187 187 MS2 22/26 Linfeng_20120125_PCAF_5.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 3.38 0.00 1 11 17 3 617.98059 1851.92722 0.12 36.14 3878 3878 MS2 31/56 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 3.38 0.00 2 0 100 3 888.44269 2663.31351 7.00 48.16 6516 6516 MS2 30/84 Linfeng_20120125_PCAF_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.37 0.00 0 11 25 2 896.37054 1791.73381 3.35 16.55 1240 1240 MS2 23/44 Linfeng_122411_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 280 3.36 0.00 0 0 100 2 793.89117 1586.77507 5.89 1.98 219 219 MS2 21/26 Linfeng_20120125_PCAF_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 317 3.35 0.00 0 7 100 3 529.59674 1586.77567 6.26 25.55 1760 1760 MS2 23/52 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 263 3.35 0.00 2 19 8 4 666.57886 2663.29360 -0.47 37.19 4023 4023 MS2 38/126 Linfeng_122411_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 3.33 0.00 0 24 100 2 919.49341 1837.97954 7.64 43.56 5915 5915 MS2 20/30 Linfeng_20120125_PCAF_10.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 499 3.33 0.00 0 9 25 2 658.34735 1315.68743 1.63 29.64 2868 2868 MS2 19/22 Linfeng_122411_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 3.31 0.00 1 4 11 4 726.35852 2902.41225 0.57 46.48 5269 5269 MS2 35/144 Linfeng_122411_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 27 3.31 0.00 0 3 100 2 896.37286 1791.73845 5.94 13.88 1012 1012 MS2 22/44 Linfeng_20120125_PCAF_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 3.31 0.00 0 0 25 3 597.91595 1791.73331 3.07 16.54 1239 1239 MS2 34/88 Linfeng_122411_rIgG_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.30 0.00 1 15 25 4 726.35785 2902.40957 -0.35 47.73 5825 5825 MS2 35/144 Linfeng_091311_rIgG_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.30 0.00 0 33 25 2 616.80121 1232.59514 -2.23 19.64 1751 1751 MS2 21/30 Linfeng_091311_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 3.30 0.00 0 19 100 2 793.89093 1586.77458 5.58 26.41 2350 2350 MS2 22/26 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 328 3.28 0.00 0 36 100 2 919.49152 1837.97576 5.58 55.68 7683 7683 MS2 19/30 Linfeng_20120125_PCAF_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 402 3.27 0.00 0 12 25 2 658.34448 1315.68169 -2.73 31.25 3592 3592 MS2 19/22 Linfeng_091311_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.26 0.00 2 6 100 4 838.92267 3352.66884 7.43 38.61 4272 4272 MS2 42/180 Linfeng_20120125_PCAF_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.25 0.00 1 32 25 3 656.02594 1966.06327 1.43 33.40 2843 2843 MS2 31/64 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 48 3.25 0.00 0 12 100 2 1353.09387 2705.18047 7.10 43.27 5561 5561 MS2 22/62 Linfeng_20120125_PCAF_9.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 3.24 0.00 2 13 100 4 666.58325 2663.31118 6.13 48.18 7465 7465 MS2 35/126 Linfeng_20120125_PCAF_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 3.24 0.00 1 16 25 4 726.36163 2902.42470 4.86 46.53 4905 4905 MS2 34/144 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 3.24 0.00 0 21 25 3 613.32703 1837.96653 0.56 37.77 3712 3712 MS2 25/60 Linfeng_122411_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 317 3.24 0.00 0 15 100 2 793.89063 1586.77397 5.19 1.58 116 116 MS2 20/26 Linfeng_20120125_PCAF_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 3.23 0.00 0 41 25 2 616.80426 1232.60124 2.72 18.32 1538 1538 MS2 20/30 Linfeng_122411_rIgG_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 306 3.23 0.00 1 19 25 3 968.14423 2902.41812 2.60 46.69 4678 4678 MS2 20/96 Linfeng_122411_rIgG_9.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 203 3.23 0.00 2 12 100 5 733.36127 3662.77723 6.62 47.92 6974 6974 MS2 45/248 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 340 3.21 0.00 0 16 100 3 529.59729 1586.77732 7.30 25.18 1714 1714 MS2 24/52 Linfeng_20120125_PCAF_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 27 3.20 0.00 0 9 100 2 896.37305 1791.73882 6.15 13.73 1062 1062 MS2 22/44 Linfeng_20120125_PCAF_6.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 212 3.19 0.00 2 8 100 5 733.36194 3662.78059 7.53 48.01 6788 6788 MS2 51/248 Linfeng_20120125_PCAF_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 492 3.19 0.00 0 20 25 2 658.34772 1315.68816 2.19 29.55 2742 2742 MS2 19/22 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 318 3.18 0.00 0 51 100 2 919.49164 1837.97600 5.72 55.71 7417 7417 MS2 19/30 Linfeng_20120125_PCAF_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 3.18 0.00 0 0 100 2 919.48987 1837.97246 3.79 55.28 7587 7587 MS2 21/30 Linfeng_20120125_PCAF_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 367 3.17 0.00 1 2 25 3 617.98138 1851.92960 1.40 36.49 3798 3798 MS2 31/56 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 215 3.17 0.00 1 24 25 3 845.73987 2535.20505 2.04 38.54 3891 3891 MS2 26/80 Linfeng_122411_rIgG_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 374 3.17 0.00 0 18 100 2 616.80652 1232.60576 6.38 15.49 983 983 MS2 21/30 Linfeng_20120125_PCAF_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 275 3.15 0.00 1 27 100 4 724.60583 2895.40151 3.89 35.36 3726 3726 MS2 38/156 Linfeng_20120125_PCAF_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 365 3.15 0.00 0 35 100 2 616.80627 1232.60527 5.99 17.22 1256 1256 MS2 22/30 Linfeng_20120125_PCAF_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 3.15 0.00 1 15 25 3 968.13959 2902.40421 -2.20 47.67 5651 5651 MS2 28/96 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.13 0.00 2 17 25 4 666.58075 2663.30117 2.37 37.26 3703 3703 MS2 38/126 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 3.13 0.00 0 100 100 2 793.89130 1586.77532 6.04 26.29 2309 2309 MS2 21/26 Linfeng_20120125_PCAF_5.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 3.13 0.00 1 6 25 3 617.98206 1851.93161 2.49 36.21 3712 3712 MS2 31/56 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 302 3.12 0.00 0 10 100 2 793.89160 1586.77593 6.43 1.80 188 188 MS2 19/26 Linfeng_20120125_PCAF_10.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 255 3.12 0.00 2 12 100 4 838.92358 3352.67251 8.52 38.50 4246 4246 MS2 50/180 Linfeng_20120125_PCAF_7.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 3.11 0.00 1 19 25 3 697.96661 2091.88529 1.37 15.67 1403 1403 MS2 30/100 Linfeng_091311_rIgG_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.11 0.00 2 2 100 4 838.92230 3352.66738 6.99 38.34 4212 4212 MS2 44/180 Linfeng_20120125_PCAF_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.11 0.00 1 2 25 4 726.35931 2902.41543 1.67 46.84 4848 4848 MS2 35/144 Linfeng_122411_rIgG_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 3.10 0.00 1 25 100 4 724.60779 2895.40932 6.58 35.07 3498 3498 MS2 34/156 Linfeng_20120125_PCAF_3.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 3.10 0.00 1 21 44 3 436.56720 1307.68705 7.15 36.03 3712 3712 MS2 21/36 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.09 0.00 2 10 25 4 666.58014 2663.29873 1.45 37.19 3318 3318 MS2 39/126 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 138 3.09 0.00 0 73 100 3 837.38879 2510.15183 7.95 40.01 4886 4886 MS2 28/88 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 317 3.08 0.00 0 5 100 2 793.89197 1586.77666 6.89 1.43 123 123 MS2 21/26 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 303 3.08 0.00 0 18 25 3 529.59473 1586.76963 2.45 25.83 1960 1960 MS2 22/52 Linfeng_122411_rIgG_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 384 3.07 0.00 0 20 100 2 616.80609 1232.60491 5.69 17.39 1147 1147 MS2 25/30 Linfeng_20120125_PCAF_4.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 446 3.06 0.00 1 13 100 3 436.56714 1307.68686 7.01 34.30 4289 4289 MS2 21/36 Linfeng_20120125_PCAF_5.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 3.05 0.00 1 3 39 3 617.98462 1851.93930 6.64 48.08 6307 6307 MS2 29/56 Linfeng_20120125_PCAF_2.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 220 3.05 0.00 1 6 89 3 845.74078 2535.20780 3.12 48.36 6377 6377 MS2 24/80 Linfeng_20120125_PCAF_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 3.05 0.00 0 16 25 3 597.91614 1791.73386 3.38 16.43 1213 1213 MS2 37/88 Linfeng_122411_rIgG_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 3.05 0.00 0 6 100 2 616.80609 1232.60491 5.69 17.37 1110 1110 MS2 21/30 Linfeng_20120125_PCAF_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 361 3.04 0.00 1 0 71 3 617.98291 1851.93418 3.87 47.34 7534 7534 MS2 27/56 Linfeng_20120125_PCAF_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 60 3.03 0.00 0 4 1 2 618.26569 1235.52410 -3.78 1.75 218 218 MS2 22/24 Linfeng_091311_rIgG_1.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 378 3.03 0.00 0 14 100 2 616.80634 1232.60539 6.09 15.46 979 979 MS2 23/30 Linfeng_20120125_PCAF_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 3.02 0.00 0 12 100 2 793.89105 1586.77483 5.73 1.61 146 146 MS2 19/26 Linfeng_20120125_PCAF_10.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 403 3.02 0.00 1 27 25 3 436.56503 1307.68055 2.18 26.74 2340 2340 MS2 23/36 Linfeng_122411_rIgG_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 3.01 0.00 0 42 100 2 919.48944 1837.97161 3.33 55.95 7464 7464 MS2 17/30 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 340 3.01 0.00 0 7 100 3 529.59741 1586.77768 7.53 25.47 2148 2148 MS2 26/52 Linfeng_20120125_PCAF_5.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 3.01 0.00 2 16 25 4 666.58087 2663.30166 2.55 37.23 3724 3724 MS2 37/126 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 364 3.01 0.00 1 3 8 3 617.98151 1851.92997 1.60 36.22 3571 3571 MS2 30/56 Linfeng_122411_rIgG_3.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 3.00 0.00 2 85 100 4 838.92242 3352.66787 7.14 37.67 4956 4956 MS2 36/180 Linfeng_20120125_PCAF_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 3.00 0.00 0 13 25 2 896.37183 1791.73638 4.79 16.38 1232 1232 MS2 19/44 Linfeng_122411_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 2.99 0.00 0 38 25 3 529.59497 1586.77036 2.92 18.70 1526 1526 MS2 23/52 Linfeng_122411_rIgG_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 2.99 0.00 1 2 25 3 617.98199 1851.93143 2.39 35.59 3118 3118 MS2 32/56 Linfeng_122411_rIgG_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 428 2.99 0.00 0 21 25 2 658.34479 1315.68230 -2.27 31.28 3644 3644 MS2 19/22 Linfeng_091311_rIgG_2.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 2.98 0.00 1 21 75 3 436.56720 1307.68705 7.15 36.08 3987 3987 MS2 19/36 Linfeng_20120125_PCAF_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 2.97 0.00 0 13 100 2 616.80676 1232.60625 6.78 17.44 1131 1131 MS2 21/30 Linfeng_20120125_PCAF_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 380 2.97 0.00 0 15 100 2 616.80652 1232.60576 6.38 15.48 1022 1022 MS2 22/30 Linfeng_20120125_PCAF_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 411 2.96 0.00 0 31 25 2 658.34412 1315.68096 -3.29 31.46 3604 3604 MS2 19/22 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 2.96 0.00 0 0 100 2 793.89142 1586.77556 6.19 1.92 217 217 MS2 17/26 Linfeng_20120125_PCAF_10.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 452 2.96 0.00 0 39 100 2 658.35022 1315.69316 5.99 31.20 2676 2676 MS2 18/22 Linfeng_20120125_PCAF_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 300 2.96 0.00 0 0 100 2 793.89380 1586.78032 9.19 11.26 865 865 MS2 21/26 Linfeng_20120125_PCAF_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 341 2.96 0.00 0 0 25 2 616.80444 1232.60161 3.02 18.45 1354 1354 MS2 19/30 Linfeng_122411_rIgG_9.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 2.96 0.00 1 24 100 4 724.60779 2895.40932 6.58 35.66 3887 3887 MS2 43/156 Linfeng_20120125_PCAF_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 329 2.96 0.00 0 24 25 2 616.80487 1232.60246 3.71 18.57 1460 1460 MS2 23/30 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 2.95 0.00 1 3 11 3 617.98456 1851.93912 6.54 48.03 6999 6999 MS2 29/56 Linfeng_20120125_PCAF_6.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 378 2.95 0.00 0 18 100 2 616.80676 1232.60625 6.78 15.44 999 999 MS2 21/30 Linfeng_20120125_PCAF_9.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 460 2.93 0.00 0 21 100 2 658.34961 1315.69194 5.06 30.98 3334 3334 MS2 19/22 Linfeng_20120125_PCAF_1.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 451 2.93 0.00 0 8 100 2 658.35052 1315.69377 6.45 31.05 2801 2801 MS2 19/22 Linfeng_20120125_PCAF_9.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 2.92 0.00 1 5 30 3 617.98523 1851.94114 7.63 48.05 6489 6489 MS2 30/56 Linfeng_20120125_PCAF_3.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 462 2.92 0.00 1 26 82 3 436.56720 1307.68705 7.15 36.03 3877 3877 MS2 20/36 Linfeng_20120125_PCAF_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 384 2.92 0.00 0 18 100 2 616.80621 1232.60515 5.89 17.59 1249 1249 MS2 20/30 Linfeng_20120125_PCAF_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 2.89 0.00 0 17 25 3 529.59509 1586.77073 3.15 17.68 1438 1438 MS2 25/52 Linfeng_122411_rIgG_4.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 2.88 0.00 1 6 25 4 726.35785 2902.40957 -0.35 47.38 5724 5724 MS2 36/144 Linfeng_091311_rIgG_2.raw High IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 397 2.88 0.00 2 36 100 3 587.65344 1760.94577 7.21 29.43 2709 2709 MS2 21/56 Linfeng_20120125_PCAF_6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 2.88 0.00 0 2 100 2 896.37311 1791.73894 6.22 13.42 852 852 MS2 22/44 Linfeng_20120125_PCAF_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 361 2.86 0.00 0 11 100 3 613.32849 1837.97092 2.95 43.47 5232 5232 MS2 25/60 Linfeng_20120125_PCAF_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 387 2.85 0.00 1 38 100 3 617.98456 1851.93912 6.54 48.30 6857 6857 MS2 26/56 Linfeng_20120125_PCAF_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 12 25 3 613.32867 1837.97147 3.25 37.72 3540 3540 MS2 24/60 Linfeng_122411_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 315 2.85 0.00 0 37 100 2 793.89069 1586.77410 5.27 1.84 199 199 MS2 20/26 Linfeng_20120125_PCAF_10.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 2.84 0.00 1 28 100 4 724.60699 2895.40615 5.49 34.68 4361 4361 MS2 37/156 Linfeng_20120125_PCAF_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 381 2.83 0.00 0 11 100 2 616.80658 1232.60588 6.48 17.46 1313 1313 MS2 21/30 Linfeng_20120125_PCAF_6.raw High IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 406 2.83 0.00 2 38 100 3 587.65289 1760.94413 6.28 29.60 2738 2738 MS2 21/56 Linfeng_20120125_PCAF_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 219 2.83 0.00 0 24 100 2 793.87952 1586.75176 -8.81 28.65 2878 2878 MS2 16/26 Linfeng_20120125_PCAF_8.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 446 2.82 0.00 1 18 32 3 436.56711 1307.68677 6.94 35.89 4102 4102 MS2 18/36 Linfeng_20120125_PCAF_6.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.81 0.00 1 19 25 4 726.35822 2902.41103 0.15 47.62 5652 5652 MS2 37/144 Linfeng_091311_rIgG_6.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 371 2.80 0.00 1 1 87 2 926.47296 1851.93865 6.29 48.03 7000 7000 MS2 19/28 Linfeng_20120125_PCAF_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 56 2.80 0.00 0 46 100 3 902.39783 2705.17893 6.53 45.88 6470 6470 MS2 23/124 Linfeng_20120125_PCAF_10.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 2.80 0.00 1 18 25 2 926.46838 1851.92949 1.34 36.27 3578 3578 MS2 17/28 Linfeng_122411_rIgG_3.raw Medium HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 2.79 0.00 1 27 25 4 492.27151 1966.06423 1.92 35.24 3446 3446 MS2 30/96 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 7 25 2 616.80463 1232.60198 3.31 18.58 1369 1369 MS2 20/30 Linfeng_122411_rIgG_1.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 303 2.77 0.00 2 76 100 4 666.58508 2663.31850 8.88 48.05 7003 7003 MS2 30/126 Linfeng_20120125_PCAF_6.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 300 2.77 0.00 1 21 100 4 724.60809 2895.41054 7.00 35.35 3559 3559 MS2 34/156 Linfeng_20120125_PCAF_3.raw Medium HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 2.77 0.00 1 11 25 4 492.27161 1966.06460 2.10 35.08 3453 3453 MS2 30/96 Linfeng_122411_rIgG_2.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 2.77 0.00 1 18 100 4 724.60852 2895.41225 7.60 34.47 4310 4310 MS2 38/156 Linfeng_20120125_PCAF_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 2.76 0.00 0 6 100 3 613.33105 1837.97861 7.14 43.47 5892 5892 MS2 28/60 Linfeng_20120125_PCAF_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 256 2.75 0.00 1 7 25 3 968.13940 2902.40366 -2.39 47.66 5817 5817 MS2 26/96 Linfeng_091311_rIgG_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 2.74 0.00 0 3 7 2 793.88580 1586.76433 -0.88 4.05 462 462 MS2 15/26 Linfeng_122411_rIgG_5.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 434 2.74 0.00 1 29 100 3 436.56693 1307.68622 6.52 36.11 3721 3721 MS2 19/36 Linfeng_20120125_PCAF_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 478 2.73 0.00 0 19 100 2 658.34955 1315.69182 4.97 31.09 3359 3359 MS2 20/22 Linfeng_20120125_PCAF_1.raw High IQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 252 2.73 0.00 1 23 25 3 365.85196 1095.54132 -5.15 22.37 2124 2124 MS2 20/28 Linfeng_091311_rIgG_1.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 405 2.71 0.00 1 25 25 3 436.56491 1307.68018 1.90 26.69 2360 2360 MS2 21/36 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 2.71 0.00 1 1 25 2 926.46912 1851.93096 2.14 36.33 3611 3611 MS2 20/28 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 2.71 0.00 1 6 100 2 926.47369 1851.94011 7.08 48.11 6699 6699 MS2 18/28 Linfeng_20120125_PCAF_9.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 208 2.70 0.00 0 2 25 2 803.37756 1605.74785 2.93 32.63 3258 3258 MS2 19/24 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 336 2.70 0.00 0 33 100 3 529.59644 1586.77475 5.69 25.89 2143 2143 MS2 24/52 Linfeng_20120125_PCAF_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 2.70 0.00 0 23 25 3 597.91608 1791.73368 3.28 16.63 1309 1309 MS2 33/88 Linfeng_122411_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 2.70 0.00 0 15 100 2 793.89221 1586.77715 7.19 10.93 810 810 MS2 15/26 Linfeng_20120125_PCAF_10.raw High IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 400 2.69 0.00 2 36 100 3 587.65338 1760.94559 7.11 29.49 2720 2720 MS2 23/56 Linfeng_20120125_PCAF_6.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 2.69 0.00 2 40 100 4 838.92316 3352.67080 8.01 37.89 5010 5010 MS2 41/180 Linfeng_20120125_PCAF_1.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 265 2.68 0.00 2 45 63 4 666.57538 2663.27968 -5.70 48.06 7720 7720 MS2 31/126 Linfeng_20120125_PCAF_8.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 2.68 0.00 1 2 29 3 617.98492 1851.94022 7.14 48.08 6517 6517 MS2 30/56 Linfeng_20120125_PCAF_7.raw High IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 407 2.68 0.00 2 35 100 3 587.65308 1760.94468 6.59 29.83 2783 2783 MS2 22/56 Linfeng_20120125_PCAF_6.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 392 2.68 0.00 1 18 25 3 436.56302 1307.67450 -2.45 28.77 3262 3262 MS2 22/36 Linfeng_091311_rIgG_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 453 2.67 0.00 0 27 100 2 658.35071 1315.69414 6.73 31.26 2851 2851 MS2 19/22 Linfeng_20120125_PCAF_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 377 2.67 0.00 0 22 100 2 616.80658 1232.60588 6.48 17.27 1211 1211 MS2 20/30 Linfeng_20120125_PCAF_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 581 2.67 0.00 0 4 25 2 530.78644 1060.56560 2.11 28.79 2612 2612 MS2 15/16 Linfeng_122411_rIgG_3.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 53 2.66 0.00 0 3 25 2 618.26544 1235.52361 -4.17 17.90 1832 1832 MS2 21/24 Linfeng_091311_rIgG_10.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 2.66 0.00 1 10 71 3 617.98352 1851.93601 4.86 48.08 7442 7442 MS2 28/56 Linfeng_20120125_PCAF_1.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 2.66 0.00 0 12 100 2 616.80664 1232.60600 6.58 17.43 1107 1107 MS2 22/30 Linfeng_20120125_PCAF_3.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 2.66 0.00 2 8 100 4 838.92206 3352.66640 6.70 38.99 4818 4818 MS2 40/180 Linfeng_20120125_PCAF_6.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 300 2.65 0.00 1 15 100 4 724.60864 2895.41274 7.76 35.80 3922 3922 MS2 34/156 Linfeng_20120125_PCAF_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 387 2.65 0.00 1 4 42 3 617.98547 1851.94187 8.03 48.10 6696 6696 MS2 29/56 Linfeng_20120125_PCAF_9.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 205 2.64 0.00 0 5 25 2 803.37750 1605.74773 2.85 32.72 3126 3126 MS2 19/24 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 324 2.63 0.00 0 19 25 2 616.80420 1232.60112 2.62 18.44 1394 1394 MS2 18/30 Linfeng_122411_rIgG_8.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 178 2.63 0.00 0 42 25 2 803.37378 1605.74028 -1.79 33.72 3914 3914 MS2 17/24 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 199 2.63 0.00 1 25 25 3 845.73578 2535.19278 -2.80 39.34 4615 4615 MS2 22/80 Linfeng_091311_rIgG_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 328 2.62 0.00 0 3 100 2 579.30212 1157.59697 5.17 25.94 1904 1904 MS2 16/20 Linfeng_20120125_PCAF_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 2.61 0.00 0 13 100 2 579.30280 1157.59831 6.33 25.70 1780 1780 MS2 16/20 Linfeng_20120125_PCAF_3.raw Medium IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 500 2.61 0.00 2 35 25 4 440.98727 1760.92727 -3.30 23.49 2098 2098 MS2 29/84 Linfeng_122411_rIgG_6.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 262 2.60 0.00 2 27 100 4 666.57495 2663.27797 -6.34 48.12 6815 6815 MS2 30/126 Linfeng_20120125_PCAF_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 379 2.60 0.00 1 0 100 3 617.98193 1851.93125 2.29 47.13 7478 7478 MS2 23/56 Linfeng_20120125_PCAF_8.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 457 2.60 0.00 0 44 100 2 658.35083 1315.69438 6.92 31.17 2672 2672 MS2 18/22 Linfeng_20120125_PCAF_3.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 2.60 0.00 2 32 25 4 666.57697 2663.28603 -3.32 37.97 4462 4462 MS2 31/126 Linfeng_091311_rIgG_4.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 2.59 0.00 1 9 25 4 726.35773 2902.40908 -0.52 47.64 5643 5643 MS2 34/144 Linfeng_091311_rIgG_5.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 594 2.59 0.00 0 5 25 2 530.78644 1060.56560 2.11 28.82 2647 2647 MS2 15/16 Linfeng_122411_rIgG_2.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 528 2.58 0.00 0 3 100 2 658.35132 1315.69536 7.66 30.96 2783 2783 MS2 18/22 Linfeng_20120125_PCAF_9.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 515 2.58 0.00 0 20 100 2 658.35107 1315.69487 7.29 31.26 3508 3508 MS2 19/22 Linfeng_20120125_PCAF_8.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 298 2.58 0.00 1 28 100 4 724.60889 2895.41372 8.10 35.65 3794 3794 MS2 36/156 Linfeng_20120125_PCAF_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 314 2.58 0.00 0 39 100 2 919.49182 1837.97637 5.92 55.78 7704 7704 MS2 19/30 Linfeng_20120125_PCAF_4.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 71 2.58 0.00 0 4 100 2 618.27167 1235.53606 5.91 14.92 985 985 MS2 17/24 Linfeng_20120125_PCAF_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 584 2.58 0.00 0 3 74 2 530.78876 1060.57024 6.48 31.73 2983 2983 MS2 15/16 Linfeng_20120125_PCAF_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 317 2.58 0.00 0 6 25 2 579.30054 1157.59380 2.42 23.76 1951 1951 MS2 17/20 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 377 2.57 0.00 0 13 100 2 616.80640 1232.60552 6.19 15.49 1181 1181 MS2 19/30 Linfeng_20120125_PCAF_6.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 451 2.56 0.00 1 27 100 3 436.56702 1307.68650 6.73 36.22 3794 3794 MS2 16/36 Linfeng_20120125_PCAF_2.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 2.55 0.00 1 9 25 4 726.36017 2902.41884 2.84 46.80 4527 4527 MS2 32/144 Linfeng_122411_rIgG_7.raw Medium HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 293 2.55 0.00 1 13 25 4 492.27167 1966.06484 2.23 35.23 3588 3588 MS2 27/96 Linfeng_122411_rIgG_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 456 2.55 0.00 0 44 100 2 658.35071 1315.69414 6.73 31.06 2649 2649 MS2 18/22 Linfeng_20120125_PCAF_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 310 2.55 0.00 0 9 25 2 579.30042 1157.59355 2.21 23.34 1929 1929 MS2 17/20 Linfeng_122411_rIgG_2.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 299 2.55 0.00 1 24 100 4 724.60718 2895.40688 5.74 35.18 3685 3685 MS2 36/156 Linfeng_20120125_PCAF_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 344 2.54 0.00 0 16 100 2 616.80658 1232.60588 6.48 15.47 1116 1116 MS2 18/30 Linfeng_20120125_PCAF_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 331 2.54 0.00 0 40 100 2 579.30255 1157.59783 5.90 26.13 2277 2277 MS2 14/20 Linfeng_20120125_PCAF_5.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 446 2.53 0.00 0 0 100 2 658.35046 1315.69365 6.36 30.95 3010 3010 MS2 17/22 Linfeng_20120125_PCAF_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 58 2.53 0.00 0 23 25 2 618.26563 1235.52397 -3.88 18.05 1736 1736 MS2 20/24 Linfeng_091311_rIgG_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 2.53 0.00 0 34 25 3 613.32489 1837.96012 -2.92 39.22 4620 4620 MS2 23/60 Linfeng_091311_rIgG_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 429 2.53 0.00 0 33 100 2 658.34991 1315.69255 5.53 31.07 3463 3463 MS2 17/22 Linfeng_20120125_PCAF_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 333 2.52 0.00 0 26 100 2 616.80695 1232.60661 7.08 15.46 1076 1076 MS2 23/30 Linfeng_20120125_PCAF_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 2.52 0.00 0 24 25 2 616.80493 1232.60259 3.81 18.38 1386 1386 MS2 17/30 Linfeng_122411_rIgG_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 2.52 0.00 0 2 100 2 579.30316 1157.59905 6.96 25.66 2056 2056 MS2 14/20 Linfeng_20120125_PCAF_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 597 2.52 0.00 0 5 11 2 530.78864 1060.56999 6.25 30.65 3256 3256 MS2 15/16 Linfeng_20120125_PCAF_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 69 2.51 0.00 0 15 100 2 618.27148 1235.53569 5.61 14.84 1073 1073 MS2 16/24 Linfeng_20120125_PCAF_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 456 2.50 0.00 0 0 100 2 658.35034 1315.69341 6.18 31.59 3155 3155 MS2 18/22 Linfeng_20120125_PCAF_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 77 2.49 0.00 0 9 100 2 618.27167 1235.53606 5.91 14.93 947 947 MS2 19/24 Linfeng_20120125_PCAF_3.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 371 2.49 0.00 1 3 100 2 926.47327 1851.93926 6.62 48.05 6491 6491 MS2 17/28 Linfeng_20120125_PCAF_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 562 2.49 0.00 0 9 25 2 530.78369 1060.56011 -3.07 31.00 3534 3534 MS2 15/16 Linfeng_091311_rIgG_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 593 2.48 0.00 0 3 76 2 530.78912 1060.57097 7.17 31.75 2781 2781 MS2 15/16 Linfeng_20120125_PCAF_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 603 2.48 0.00 0 6 25 2 530.78357 1060.55986 -3.30 30.80 3641 3641 MS2 15/16 Linfeng_091311_rIgG_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.47 0.00 0 3 21 2 530.78595 1060.56462 1.19 29.02 2787 2787 MS2 15/16 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 625 2.47 0.00 0 37 25 2 530.78589 1060.56450 1.07 27.69 2329 2329 MS2 15/16 Linfeng_122411_rIgG_10.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 170 2.46 0.00 0 15 25 2 533.25177 1065.49626 -2.93 20.20 2122 2122 MS2 14/16 Linfeng_091311_rIgG_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 384 2.46 0.00 0 25 100 2 579.30304 1157.59880 6.75 25.74 2203 2203 MS2 15/20 Linfeng_20120125_PCAF_5.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 444 2.45 0.00 0 15 100 2 658.35083 1315.69438 6.92 30.91 2815 2815 MS2 18/22 Linfeng_20120125_PCAF_4.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 57 2.45 0.00 0 13 25 2 618.26501 1235.52275 -4.86 17.94 1801 1801 MS2 20/24 Linfeng_091311_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 2.45 0.00 0 0 25 2 896.37115 1791.73503 4.04 16.29 1235 1235 MS2 20/44 Linfeng_122411_rIgG_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 59 2.45 0.00 0 33 25 2 618.26654 1235.52580 -2.39 18.00 1751 1751 MS2 19/24 Linfeng_091311_rIgG_7.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 194 2.45 0.00 0 6 25 2 533.25220 1065.49712 -2.12 20.07 2058 2058 MS2 15/16 Linfeng_091311_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 560 2.44 0.00 0 3 18 2 530.78394 1060.56059 -2.61 30.65 3521 3521 MS2 15/16 Linfeng_091311_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 600 2.44 0.00 0 26 25 2 530.78357 1060.55986 -3.30 30.71 3568 3568 MS2 15/16 Linfeng_091311_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 360 2.44 0.00 1 9 100 2 926.46930 1851.93132 2.33 47.47 7566 7566 MS2 14/28 Linfeng_20120125_PCAF_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 632 2.44 0.00 0 1 100 2 530.78882 1060.57036 6.60 31.74 2941 2941 MS2 15/16 Linfeng_20120125_PCAF_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 2.44 0.00 0 21 100 2 616.80664 1232.60600 6.58 15.39 1114 1114 MS2 19/30 Linfeng_20120125_PCAF_2.raw Medium IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 384 2.44 0.00 1 14 25 3 436.56296 1307.67432 -2.59 29.05 3236 3236 MS2 23/36 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 278 2.43 0.00 0 31 100 2 919.49017 1837.97307 4.12 48.45 6613 6613 MS2 15/30 Linfeng_20120125_PCAF_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 365 2.43 0.00 0 17 100 2 616.80627 1232.60527 5.99 17.40 1239 1239 MS2 19/30 Linfeng_20120125_PCAF_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.43 0.00 0 4 3 2 579.29816 1157.58904 -1.69 4.62 556 556 MS2 17/20 Linfeng_122411_rIgG_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 2.43 0.00 0 12 25 2 616.80115 1232.59502 -2.33 23.23 2498 2498 MS2 21/30 Linfeng_091311_rIgG_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 2.43 0.00 1 6 100 2 926.47339 1851.93950 6.75 48.09 6520 6520 MS2 17/28 Linfeng_20120125_PCAF_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 509 2.43 0.00 0 24 25 2 530.78516 1060.56304 -0.31 28.52 2830 2830 MS2 15/16 Linfeng_122411_rIgG_5.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 76 2.42 0.00 0 8 100 2 618.27228 1235.53728 6.89 14.89 962 962 MS2 14/24 Linfeng_20120125_PCAF_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 2.42 0.00 0 33 25 2 530.78656 1060.56584 2.34 27.57 2234 2234 MS2 14/16 Linfeng_122411_rIgG_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 634 2.42 0.00 0 3 34 2 530.78900 1060.57073 6.94 30.74 2759 2759 MS2 15/16 Linfeng_20120125_PCAF_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 532 2.42 0.00 0 6 14 2 530.78406 1060.56084 -2.38 30.69 3520 3520 MS2 15/16 Linfeng_091311_rIgG_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 419 2.42 0.00 0 24 100 2 658.34991 1315.69255 5.53 31.16 3484 3484 MS2 19/22 Linfeng_20120125_PCAF_8.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 204 2.41 0.00 0 22 100 2 803.38068 1605.75408 6.80 39.19 4367 4367 MS2 15/24 Linfeng_20120125_PCAF_2.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 191 2.40 0.00 0 11 25 2 533.25201 1065.49675 -2.47 2.75 366 366 MS2 15/16 Linfeng_091311_rIgG_1.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 193 2.40 0.00 0 28 25 2 533.25220 1065.49712 -2.12 20.02 2061 2061 MS2 15/16 Linfeng_091311_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 511 2.40 0.00 0 4 5 2 530.78552 1060.56377 0.38 29.56 2915 2915 MS2 15/16 Linfeng_122411_rIgG_6.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 76 2.40 0.00 0 10 100 2 618.27209 1235.53691 6.60 13.89 873 873 MS2 16/24 Linfeng_20120125_PCAF_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 568 2.40 0.00 0 16 25 2 530.78351 1060.55974 -3.41 30.89 3579 3579 MS2 15/16 Linfeng_091311_rIgG_8.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 528 2.39 0.00 0 18 100 2 658.35138 1315.69548 7.75 30.79 2750 2750 MS2 18/22 Linfeng_20120125_PCAF_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 609 2.39 0.00 0 2 22 2 530.78912 1060.57097 7.17 30.70 3374 3374 MS2 15/16 Linfeng_20120125_PCAF_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 63 2.38 0.00 0 4 25 2 618.26648 1235.52568 -2.49 17.75 1740 1740 MS2 22/24 Linfeng_091311_rIgG_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.38 0.00 0 3 8 2 579.29694 1157.58660 -3.80 27.98 3188 3188 MS2 17/20 Linfeng_091311_rIgG_8.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 2.38 0.00 1 3 87 2 926.47290 1851.93852 6.22 48.09 6309 6309 MS2 15/28 Linfeng_20120125_PCAF_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 309 2.38 0.00 0 5 25 2 579.30017 1157.59307 1.79 26.43 2499 2499 MS2 17/20 Linfeng_122411_rIgG_6.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 497 2.38 0.00 0 7 100 2 658.35089 1315.69451 7.01 30.90 2771 2771 MS2 18/22 Linfeng_20120125_PCAF_9.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 2.37 0.00 0 11 25 2 533.25226 1065.49724 -2.01 20.37 2083 2083 MS2 15/16 Linfeng_091311_rIgG_7.raw Medium IQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 250 2.37 0.00 1 32 25 3 365.85303 1095.54453 -2.23 23.13 2457 2457 MS2 17/28 Linfeng_091311_rIgG_9.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 2.37 0.00 1 3 100 2 926.47351 1851.93974 6.88 48.06 6801 6801 MS2 16/28 Linfeng_20120125_PCAF_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 342 2.37 0.00 0 8 25 2 579.30060 1157.59392 2.53 22.33 1822 1822 MS2 17/20 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 401 2.37 0.00 0 6 100 2 579.30334 1157.59941 7.27 26.06 1924 1924 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 504 2.37 0.00 0 9 11 2 530.78558 1060.56389 0.50 3.44 326 326 MS2 14/16 Linfeng_122411_rIgG_7.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 401 2.37 0.00 0 0 100 2 579.30316 1157.59905 6.96 25.86 2139 2139 MS2 15/20 Linfeng_20120125_PCAF_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 545 2.36 0.00 0 5 15 2 530.78412 1060.56096 -2.26 30.90 3534 3534 MS2 15/16 Linfeng_091311_rIgG_6.raw Medium IQDWYDKKGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 398 2.36 0.00 2 36 100 3 587.65332 1760.94541 7.01 29.67 2751 2751 MS2 21/56 Linfeng_20120125_PCAF_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 2.36 0.00 0 24 25 2 579.29749 1157.58769 -2.85 27.75 2855 2855 MS2 16/20 Linfeng_091311_rIgG_1.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 424 2.36 0.00 0 73 100 2 658.35052 1315.69377 6.45 31.43 2722 2722 MS2 16/22 Linfeng_20120125_PCAF_3.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 2.36 0.00 0 18 25 2 491.72269 982.43810 4.41 2.97 256 256 MS2 20/22 Linfeng_122411_rIgG_7.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 200 2.35 0.00 0 6 25 2 533.25244 1065.49761 -1.67 20.39 2115 2115 MS2 15/16 Linfeng_091311_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 611 2.34 0.00 0 3 100 2 530.78851 1060.56975 6.02 31.69 3505 3505 MS2 14/16 Linfeng_20120125_PCAF_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 2.34 0.00 0 53 25 2 579.30029 1157.59331 2.00 24.95 2244 2244 MS2 16/20 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.34 0.00 0 4 7 2 530.78351 1060.55974 -3.41 30.81 3269 3269 MS2 15/16 Linfeng_091311_rIgG_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 378 2.34 0.00 0 3 100 2 579.30334 1157.59941 7.27 25.76 2073 2073 MS2 18/20 Linfeng_20120125_PCAF_6.raw Medium IQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 204 2.33 0.00 1 11 12 3 365.85242 1095.54270 -3.90 22.85 2483 2483 MS2 18/28 Linfeng_091311_rIgG_2.raw Medium IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 389 2.33 0.00 1 27 25 3 436.56265 1307.67340 -3.29 28.99 3023 3023 MS2 20/36 Linfeng_091311_rIgG_1.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 172 2.32 0.00 0 55 25 2 533.25189 1065.49651 -2.70 20.02 2087 2087 MS2 15/16 Linfeng_091311_rIgG_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 642 2.32 0.00 0 19 92 2 530.78857 1060.56987 6.14 31.42 3525 3525 MS2 15/16 Linfeng_20120125_PCAF_5.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 75 2.32 0.00 0 7 100 2 618.27191 1235.53655 6.30 14.90 942 942 MS2 17/24 Linfeng_20120125_PCAF_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 323 2.32 0.00 0 14 22 2 579.29791 1157.58855 -2.11 27.89 3081 3081 MS2 16/20 Linfeng_091311_rIgG_5.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 2.31 0.00 0 10 100 2 491.72385 982.44042 6.77 12.34 856 856 MS2 15/22 Linfeng_20120125_PCAF_8.raw Medium TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 2.31 0.00 1 6 50 3 617.98505 1851.94059 7.34 48.05 6797 6797 MS2 29/56 Linfeng_20120125_PCAF_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 610 2.31 0.00 0 16 25 2 530.78571 1060.56413 0.73 28.43 2506 2506 MS2 15/16 Linfeng_122411_rIgG_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 672 2.31 0.00 0 3 78 2 530.78949 1060.57170 7.87 31.71 2932 2932 MS2 15/16 Linfeng_20120125_PCAF_9.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 458 2.31 0.00 0 19 100 2 658.35083 1315.69438 6.92 30.79 2794 2794 MS2 18/22 Linfeng_20120125_PCAF_4.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 74 2.30 0.00 0 24 25 2 618.26752 1235.52776 -0.81 17.96 1723 1723 MS2 20/24 Linfeng_091311_rIgG_5.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 517 2.30 0.00 0 16 100 2 658.35101 1315.69475 7.20 30.84 2761 2761 MS2 18/22 Linfeng_20120125_PCAF_9.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 64 2.30 0.00 0 19 25 2 618.27032 1235.53337 3.73 16.89 1375 1375 MS2 15/24 Linfeng_122411_rIgG_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 396 2.30 0.00 0 16 100 2 579.30304 1157.59880 6.75 25.75 1882 1882 MS2 15/20 Linfeng_20120125_PCAF_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 347 2.29 0.00 0 7 100 2 579.30237 1157.59746 5.59 25.66 1802 1802 MS2 15/20 Linfeng_20120125_PCAF_9.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 2.29 0.00 0 9 22 2 579.29712 1157.58696 -3.48 27.95 3140 3140 MS2 17/20 Linfeng_091311_rIgG_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 401 2.29 0.00 0 3 100 2 579.30328 1157.59929 7.17 25.73 2068 2068 MS2 16/20 Linfeng_20120125_PCAF_6.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 92 2.29 0.00 0 2 25 2 491.72025 982.43321 -0.56 4.82 446 446 MS2 20/22 Linfeng_091311_rIgG_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 72 2.29 0.00 0 12 100 2 618.27197 1235.53667 6.40 13.90 1001 1001 MS2 19/24 Linfeng_20120125_PCAF_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 4 13 2 579.29803 1157.58879 -1.90 27.72 3118 3118 MS2 16/20 Linfeng_091311_rIgG_4.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 71 2.28 0.00 0 0 25 2 618.26990 1235.53252 3.04 17.07 1375 1375 MS2 15/24 Linfeng_122411_rIgG_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 2.27 0.00 0 5 10 2 579.29675 1157.58623 -4.11 27.74 3164 3164 MS2 17/20 Linfeng_091311_rIgG_2.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 92 2.27 0.00 0 6 25 2 491.72006 982.43285 -0.93 2.70 253 253 MS2 20/22 Linfeng_091311_rIgG_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 391 2.27 0.00 0 22 100 2 579.30316 1157.59905 6.96 25.77 2103 2103 MS2 15/20 Linfeng_20120125_PCAF_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 601 2.27 0.00 0 2 83 2 530.78888 1060.57048 6.71 30.81 2979 2979 MS2 15/16 Linfeng_20120125_PCAF_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 635 2.26 0.00 0 5 31 2 530.78870 1060.57012 6.37 30.80 3378 3378 MS2 15/16 Linfeng_20120125_PCAF_5.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 607 2.26 0.00 0 2 29 2 530.78912 1060.57097 7.17 30.65 2940 2940 MS2 15/16 Linfeng_20120125_PCAF_6.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 547 2.25 0.00 0 10 100 2 658.35101 1315.69475 7.20 30.99 2831 2831 MS2 19/22 Linfeng_20120125_PCAF_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 2.25 0.00 0 24 25 2 793.88959 1586.77190 3.89 17.52 1425 1425 MS2 18/26 Linfeng_122411_rIgG_4.raw Medium IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 450 2.25 0.00 1 26 100 3 436.56699 1307.68640 6.66 36.29 3808 3808 MS2 16/36 Linfeng_20120125_PCAF_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 594 2.25 0.00 0 2 18 2 530.78894 1060.57060 6.83 30.71 2778 2778 MS2 14/16 Linfeng_20120125_PCAF_4.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 155 2.24 0.00 0 24 25 2 533.25104 1065.49480 -4.30 20.29 2056 2056 MS2 15/16 Linfeng_091311_rIgG_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 622 2.24 0.00 0 3 33 2 530.78918 1060.57109 7.29 30.69 2732 2732 MS2 15/16 Linfeng_20120125_PCAF_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 525 2.24 0.00 0 14 11 2 530.78381 1060.56035 -2.84 30.88 3480 3480 MS2 15/16 Linfeng_091311_rIgG_5.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 74 2.23 0.00 0 9 100 2 618.27161 1235.53594 5.81 13.89 1073 1073 MS2 16/24 Linfeng_20120125_PCAF_6.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 91 2.23 0.00 0 0 25 2 491.72040 982.43352 -0.25 6.29 524 524 MS2 19/22 Linfeng_091311_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 549 2.23 0.00 0 3 13 2 530.78387 1060.56047 -2.72 30.93 3520 3520 MS2 15/16 Linfeng_091311_rIgG_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 638 2.23 0.00 0 10 100 2 530.78870 1060.57012 6.37 29.75 3125 3125 MS2 15/16 Linfeng_20120125_PCAF_5.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 67 2.22 0.00 0 36 25 2 618.27063 1235.53398 4.23 17.08 1346 1346 MS2 15/24 Linfeng_122411_rIgG_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 410 2.22 0.00 0 26 100 2 595.81213 1190.61699 7.04 31.14 2862 2862 MS2 14/18 Linfeng_20120125_PCAF_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 378 2.21 0.00 0 3 100 2 579.30280 1157.59831 6.33 25.76 1887 1887 MS2 16/20 Linfeng_20120125_PCAF_7.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 75 2.20 0.00 0 15 100 2 618.27179 1235.53630 6.10 13.84 1015 1015 MS2 16/24 Linfeng_20120125_PCAF_2.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 140 2.20 0.00 0 4 100 2 491.72342 982.43956 5.90 2.98 218 218 MS2 16/22 Linfeng_20120125_PCAF_3.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 93 2.20 0.00 0 2 25 2 491.72043 982.43358 -0.18 7.30 595 595 MS2 20/22 Linfeng_091311_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 634 2.19 0.00 0 4 100 2 530.78900 1060.57073 6.94 31.68 3143 3143 MS2 14/16 Linfeng_20120125_PCAF_6.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 76 2.18 0.00 0 12 100 2 618.27228 1235.53728 6.89 13.87 896 896 MS2 15/24 Linfeng_20120125_PCAF_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 613 2.18 0.00 0 0 100 2 530.78851 1060.56975 6.02 29.74 2452 2452 MS2 15/16 Linfeng_20120125_PCAF_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 457 2.18 0.00 0 45 100 2 658.35028 1315.69328 6.08 30.62 3355 3355 MS2 14/22 Linfeng_20120125_PCAF_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.17 0.00 0 3 58 2 530.78888 1060.57048 6.71 30.75 2608 2608 MS2 14/16 Linfeng_20120125_PCAF_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 651 2.17 0.00 0 3 24 2 530.78931 1060.57134 7.52 30.74 2589 2589 MS2 14/16 Linfeng_20120125_PCAF_3.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 98 2.16 0.00 0 0 25 2 491.72226 982.43724 3.54 2.87 253 253 MS2 20/22 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 301 2.16 0.00 0 24 25 2 579.29669 1157.58611 -4.22 27.79 3227 3227 MS2 15/20 Linfeng_091311_rIgG_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 71 2.15 0.00 0 18 25 2 618.26953 1235.53179 2.45 16.95 1402 1402 MS2 14/24 Linfeng_122411_rIgG_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 338 2.14 0.00 0 8 100 2 579.30072 1157.59416 2.74 25.75 2187 2187 MS2 16/20 Linfeng_20120125_PCAF_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 2.13 0.00 0 4 80 2 579.30334 1157.59941 7.27 25.83 2083 2083 MS2 17/20 Linfeng_20120125_PCAF_6.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 216 2.13 0.00 0 53 100 2 803.38049 1605.75371 6.58 39.02 5278 5278 MS2 12/24 Linfeng_20120125_PCAF_1.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 192 2.12 0.00 0 55 25 2 533.25201 1065.49675 -2.47 3.09 415 415 MS2 15/16 Linfeng_091311_rIgG_1.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 124 2.11 0.00 0 4 100 2 491.72388 982.44048 6.84 3.01 204 204 MS2 19/22 Linfeng_20120125_PCAF_4.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 109 2.11 0.00 0 4 3 2 491.72180 982.43633 2.61 3.08 301 301 MS2 19/22 Linfeng_122411_rIgG_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 2.11 0.00 0 0 100 2 579.30261 1157.59795 6.01 25.93 2150 2150 MS2 14/20 Linfeng_20120125_PCAF_10.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 2.10 0.00 1 6 100 2 926.47186 1851.93645 5.10 48.09 7444 7444 MS2 16/28 Linfeng_20120125_PCAF_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 59 2.10 0.00 0 11 25 2 618.26636 1235.52544 -2.69 17.59 1706 1706 MS2 16/24 Linfeng_091311_rIgG_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 2.10 0.00 0 30 25 2 579.30054 1157.59380 2.42 22.75 1835 1835 MS2 15/20 Linfeng_122411_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 618 2.09 0.00 0 12 100 2 530.78851 1060.56975 6.02 29.68 3126 3126 MS2 14/16 Linfeng_20120125_PCAF_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 643 2.08 0.00 0 19 100 2 530.78778 1060.56828 4.64 34.41 4168 4168 MS2 14/16 Linfeng_20120125_PCAF_1.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 445 2.08 0.00 0 39 100 2 595.81158 1190.61589 6.12 30.92 3407 3407 MS2 10/18 Linfeng_20120125_PCAF_5.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 418 2.07 0.00 0 20 100 2 595.81219 1190.61711 7.14 31.10 2657 2657 MS2 10/18 Linfeng_20120125_PCAF_3.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 97 2.07 0.00 0 0 25 2 491.71970 982.43212 -1.68 0.76 73 73 MS2 21/22 Linfeng_091311_rIgG_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 634 2.06 0.00 0 9 100 2 530.78888 1060.57048 6.71 32.13 3007 3007 MS2 13/16 Linfeng_20120125_PCAF_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 429 2.06 0.00 0 29 100 2 595.81201 1190.61675 6.83 31.27 2853 2853 MS2 10/18 Linfeng_20120125_PCAF_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 631 2.05 0.00 0 4 100 2 530.78882 1060.57036 6.60 29.80 2790 2790 MS2 14/16 Linfeng_20120125_PCAF_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 628 2.05 0.00 0 3 100 2 530.78912 1060.57097 7.17 31.77 2783 2783 MS2 14/16 Linfeng_20120125_PCAF_7.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 72 2.05 0.00 0 9 25 2 618.26965 1235.53203 2.65 17.03 1255 1255 MS2 16/24 Linfeng_122411_rIgG_7.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 91 2.02 0.00 0 4 22 2 491.71997 982.43266 -1.12 2.66 235 235 MS2 19/22 Linfeng_091311_rIgG_3.raw High SLEDTKNR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 423 2.02 0.00 1 0 25 2 481.75070 962.49413 4.09 2.87 243 243 MS2 13/14 Linfeng_122411_rIgG_7.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 2.02 0.00 0 44 25 2 579.30078 1157.59429 2.85 15.24 1256 1256 MS2 12/20 Linfeng_122411_rIgG_5.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 626 2.01 0.00 0 5 100 2 530.78864 1060.56999 6.25 11.13 721 721 MS2 13/16 Linfeng_20120125_PCAF_4.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 380 2.01 0.00 0 32 100 2 595.81226 1190.61724 7.24 30.44 2898 2898 MS2 11/18 Linfeng_20120125_PCAF_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 639 2.01 0.00 0 43 100 2 530.78839 1060.56951 5.79 29.70 2581 2581 MS2 13/16 Linfeng_20120125_PCAF_4.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 93 2.01 0.00 0 1 25 2 491.72046 982.43364 -0.12 8.31 667 667 MS2 18/22 Linfeng_091311_rIgG_6.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 2.00 0.00 0 26 25 2 491.72278 982.43828 4.60 2.86 252 252 MS2 15/22 Linfeng_122411_rIgG_3.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 72 2.00 0.00 0 11 100 2 618.27191 1235.53655 6.30 14.69 1127 1127 MS2 14/24 Linfeng_20120125_PCAF_6.raw IPI00019380.1 Nuclear cap-binding protein subunit 1 5.70 1 3 3 3 7.18 5.70 3 3 790 91.8 6.43 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLFLVIFQR Unambiguous 1 1 IPI00019380.1 CID 1.0000 0.0000 1 1 166 2.54 0.00 0 10 25 2 575.34210 1149.67693 -0.88 46.67 5561 5561 MS2 15/16 Linfeng_091311_rIgG_3.raw Medium ILDIVPPTFSALcPANPTcIYK Unambiguous 1 1 IPI00019380.1 C13(Carbamidomethyl); C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 389 2.38 0.00 0 30 25 3 830.76288 2490.27408 -1.26 46.07 5486 5486 MS2 20/84 Linfeng_091311_rIgG_3.raw Medium LTIYTTLVGLLNAR Unambiguous 1 1 IPI00019380.1 CID 1.0000 0.0000 1 1 107 2.26 0.00 0 36 25 3 516.64331 1547.91538 -0.15 51.18 6117 6117 MS2 21/52 Linfeng_091311_rIgG_3.raw IPI00019488.1 U3 small nucleolar ribonucleoprotein protein IMP3 22.83 1 4 4 4 9.49 22.83 4 4 0.00 184 21.8 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGPDVVTDPAFLVTR Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 352 2.86 0.00 0 21 25 2 793.43115 1585.85503 -2.20 39.20 4587 4587 MS2 20/28 Linfeng_091311_rIgG_9.raw High HVLEYNEER Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 190 2.24 0.00 0 21 25 2 594.78381 1188.56035 -3.42 19.63 1962 1962 MS2 14/16 Linfeng_091311_rIgG_9.raw High LYALGLVPTR Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 196 2.24 0.00 0 15 25 2 551.83289 1102.65849 -3.13 36.83 4283 4283 MS2 17/18 Linfeng_091311_rIgG_9.raw High ASAALLDK Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 584 2.15 0.00 0 36 25 2 394.72742 788.44756 -4.74 21.15 2177 2177 MS2 11/14 Linfeng_091311_rIgG_9.raw IPI00020101.9 Histone H2B type 1-C/E/F/G/I 60.32 14 3 11 33 40.17 50.00 8 14 53.83 52.38 7 19 0.00 126 13.9 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 219 4.32 0.00 0 3 25 3 581.94611 1743.82376 2.51 47.13 4850 4850 MS2 31/56 Linfeng_122411_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 220 4.11 0.00 0 1 25 3 581.94641 1743.82468 3.03 47.15 4735 4735 MS2 31/56 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 202 4.03 0.00 0 0 25 3 581.94354 1743.81607 -1.90 48.36 5903 5903 MS2 31/56 Linfeng_091311_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 196 4.02 0.00 0 10 25 2 872.41638 1743.82549 3.50 47.09 4727 4727 MS2 23/28 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 189 3.92 0.00 0 11 25 2 872.41315 1743.81902 -0.21 48.33 5900 5900 MS2 23/28 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTKYTSSK Unambiguous 14 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 406 3.86 0.00 2 54 25 4 449.23911 1793.93459 -2.60 18.28 1886 1886 MS2 30/96 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.85 0.00 1 3 15 3 409.89600 1227.67344 3.42 2.95 239 239 MS2 27/44 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 190 3.83 0.00 0 4 25 2 872.41644 1743.82561 3.57 47.04 4839 4839 MS2 22/28 Linfeng_122411_rIgG_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 209 3.63 0.00 0 15 25 2 872.41547 1743.82366 2.45 47.22 4895 4895 MS2 23/28 Linfeng_122411_rIgG_8.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 358 3.60 0.00 1 38 25 3 409.89291 1227.66419 -4.11 2.70 259 259 MS2 27/44 Linfeng_091311_rIgG_10.raw High SRKESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 448 3.25 0.00 2 20 25 3 503.59534 1508.77146 -1.94 22.28 2453 2453 MS2 22/44 Linfeng_091311_rIgG_10.raw High SRKESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 401 3.08 0.00 2 11 25 3 503.59332 1508.76542 -5.95 25.26 2873 2873 MS2 19/44 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.02 0.00 1 4 22 3 409.89587 1227.67307 3.13 2.88 242 242 MS2 25/44 Linfeng_122411_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 346 2.77 0.00 1 7 4 3 422.55075 1265.63770 -2.80 24.70 2794 2794 MS2 23/36 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 370 2.69 0.00 1 45 25 3 422.55304 1265.64457 2.63 23.93 1933 1933 MS2 22/36 Linfeng_122411_rIgG_8.raw Medium STITSREIQTAVRLLLPGELAK Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.65 0.00 2 25 25 4 599.85388 2396.39370 2.69 43.55 4393 4393 MS2 32/126 Linfeng_122411_rIgG_10.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 61 2.42 0.00 1 7 25 3 584.35382 1751.04691 2.44 38.48 3742 3742 MS2 24/60 Linfeng_122411_rIgG_10.raw Medium KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 397 2.38 0.00 1 33 25 3 422.55264 1265.64338 1.69 22.36 1955 1955 MS2 21/36 Linfeng_122411_rIgG_6.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 61 2.36 0.00 1 6 25 3 584.35364 1751.04636 2.12 38.40 3625 3625 MS2 25/60 Linfeng_122411_rIgG_9.raw Medium EIQTAVRLLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 73 2.36 0.00 1 4 22 3 584.35107 1751.03867 -2.27 39.36 4763 4763 MS2 24/60 Linfeng_091311_rIgG_10.raw Medium KESYSVYVYKVLK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 353 2.31 0.00 2 13 25 3 535.96643 1605.88474 -2.47 30.55 3608 3608 MS2 20/48 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 321 2.30 0.00 1 12 25 2 633.32227 1265.63725 -3.15 24.89 2702 2702 MS2 15/18 Linfeng_091311_rIgG_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 345 2.29 0.00 1 4 25 2 633.32281 1265.63835 -2.28 28.45 3320 3320 MS2 15/18 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 342 2.25 0.00 1 4 5 2 633.32227 1265.63725 -3.15 24.70 2793 2793 MS2 15/18 Linfeng_091311_rIgG_10.raw High IAGEASR Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 515 2.13 0.00 0 3 25 2 352.19202 703.37676 4.81 2.96 244 244 MS2 11/12 Linfeng_122411_rIgG_8.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 75 2.11 0.00 0 3 18 2 477.30609 953.60491 1.94 31.83 2792 2792 MS2 14/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 30 2.10 0.00 0 3 13 2 477.30441 953.60155 -1.58 32.11 3324 3324 MS2 13/16 Linfeng_122411_rIgG_5.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 39 2.09 0.00 0 8 25 2 477.30557 953.60387 0.86 31.84 2887 2887 MS2 13/16 Linfeng_122411_rIgG_10.raw High HAVSEGTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 199 2.08 0.00 0 32 25 2 414.71359 828.41991 -1.37 0.15 22 22 MS2 12/14 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 338 2.07 0.00 1 20 25 2 633.32233 1265.63738 -3.05 27.19 3142 3142 MS2 15/18 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 353 2.06 0.00 1 19 25 2 633.32568 1265.64409 2.25 23.69 1831 1831 MS2 9/18 Linfeng_122411_rIgG_10.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 7 25 2 477.30594 953.60460 1.62 34.03 3076 3076 MS2 12/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 19 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 37 2.01 0.00 0 11 25 2 477.30457 953.60185 -1.26 44.35 4495 4495 MS2 10/16 Linfeng_122411_rIgG_10.raw IPI00020127.1 Replication protein A 70 kDa DNA-binding subunit 6.82 1 3 3 3 7.83 6.82 3 3 0.00 616 68.1 7.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GWFDAEGQALDGVSISDLK Unambiguous 1 1 IPI00020127.1 CID 1.0000 0.0000 1 1 256 3.17 0.00 0 23 25 2 1004.48486 2007.96245 -1.73 44.60 5298 5298 MS2 21/36 Linfeng_091311_rIgG_4.raw High DSLVDIIGIcK Unambiguous 1 1 IPI00020127.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 518 2.51 0.00 0 20 25 2 616.83020 1232.65312 -1.98 41.83 4950 4950 MS2 17/20 Linfeng_091311_rIgG_4.raw High SGGVGGSNTNWK Unambiguous 1 1 IPI00020127.1 CID 1.0000 0.0000 1 1 194 2.15 0.00 0 16 25 2 582.27454 1163.54180 -1.92 20.11 2063 2063 MS2 15/22 Linfeng_091311_rIgG_4.raw IPI00020128.2 U3 small nucleolar RNA-associated protein 6 homolog 15.91 1 7 7 8 8.94 7.37 3 3 15.06 12.23 5 5 597 70.1 7.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IEDRLPELEQLER Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 362 4.16 0.00 1 28 25 3 547.29456 1639.86911 2.47 33.10 3317 3317 MS2 27/48 Linfeng_122411_rIgG_4.raw High EIYDDLQALHTDDPLTWDYVAR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 201 3.73 0.00 0 11 25 3 883.75244 2649.24277 -1.53 44.22 5250 5250 MS2 31/84 Linfeng_091311_rIgG_4.raw High ALLAVIGADSVTLK Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 107 3.31 0.00 0 27 25 2 685.91827 1370.82927 2.81 38.66 4020 4020 MS2 21/26 Linfeng_122411_rIgG_4.raw High ELEIESQTEEQPTTK Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 243 3.07 0.00 0 9 25 2 881.41992 1761.83257 -3.62 25.76 2848 2848 MS2 18/28 Linfeng_091311_rIgG_4.raw High SLQESRPFSVDFFR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 406 2.77 0.00 0 43 25 3 572.29156 1714.86014 3.10 36.96 3806 3806 MS2 22/52 Linfeng_122411_rIgG_4.raw Medium EIYDDLQALHTDDPLTWDYVAR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 232 2.43 0.00 0 9 25 3 883.75757 2649.25815 4.27 43.30 4602 4602 MS2 24/84 Linfeng_122411_rIgG_4.raw Medium IGLFSHAEIK Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 496 2.39 0.00 0 35 25 3 372.21448 1114.62888 2.97 27.76 2619 2619 MS2 19/36 Linfeng_122411_rIgG_4.raw High YLDWAYR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 164 2.14 0.00 0 8 25 2 493.73904 986.47081 -2.28 33.71 3913 3913 MS2 11/12 Linfeng_091311_rIgG_4.raw IPI00020194.1 Isoform Short of TATA-binding protein-associated factor 2N 18.85 2 4 6 17 7.13 10.02 3 3 43.40 17.32 5 14 589 61.5 8.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 35 5.28 0.00 0 0 25 3 1208.20679 3622.60581 3.22 44.71 4782 4782 MS2 37/132 Linfeng_122411_rIgG_4.raw High TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 35 4.95 0.00 0 4 25 4 906.40729 3622.60732 3.64 44.80 4793 4793 MS2 46/198 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 183 3.24 0.00 0 0 25 2 710.83551 1420.66374 3.24 20.89 1743 1743 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 182 3.18 0.00 0 1 25 2 710.83557 1420.66387 3.33 19.87 1633 1633 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 165 3.10 0.00 0 5 24 2 710.83167 1420.65605 -2.17 4.72 556 556 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 181 2.92 0.00 0 0 25 2 710.83557 1420.66387 3.33 16.81 1369 1369 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 186 2.87 0.00 0 1 25 2 710.83521 1420.66313 2.81 17.83 1453 1453 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 176 2.87 0.00 0 4 25 2 710.83508 1420.66289 2.64 18.85 1540 1540 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 192 2.82 0.00 0 13 25 2 710.83563 1420.66399 3.41 15.81 1287 1287 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 195 2.78 0.00 0 0 25 2 710.83545 1420.66362 3.15 14.80 1212 1212 MS2 17/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 185 2.69 0.00 0 27 25 2 710.83527 1420.66326 2.90 25.14 2327 2327 MS2 19/26 Linfeng_122411_rIgG_6.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 162 2.65 0.00 0 0 25 2 710.82874 1420.65019 -6.30 26.57 2961 2961 MS2 20/26 Linfeng_091311_rIgG_4.raw High SGGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 41 2.35 0.00 0 4 25 2 413.17969 825.35210 4.22 2.96 283 283 MS2 15/16 Linfeng_122411_rIgG_4.raw High SSGGGYSGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 42 2.34 0.00 0 6 25 2 471.70120 942.39513 4.17 3.04 296 296 MS2 17/18 Linfeng_122411_rIgG_4.raw High AAIDWFDGK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 249 2.33 0.00 0 17 25 2 511.74945 1022.49162 -2.55 36.49 4273 4273 MS2 13/16 Linfeng_091311_rIgG_4.raw High SGGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 32 2.15 0.00 0 13 25 2 413.17734 825.34740 -1.47 2.65 234 234 MS2 14/16 Linfeng_091311_rIgG_4.raw High SGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 50 2.02 0.00 0 0 25 2 384.66888 768.33049 4.36 2.90 275 275 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00021304.1 "Keratin, type II cytoskeletal 2 epidermal" 84.81 2 37 54 1150 1008.76 68.84 40 324 952.76 69.15 41 282 1573.77 60.62 30 544 645 65.8 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 30 9.00 0.00 0 2 25 3 944.40491 2831.20017 2.05 38.57 3895 3895 MS2 62/140 Linfeng_122411_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 32 8.77 0.00 0 15 25 3 944.40631 2831.20438 3.54 38.49 3999 3999 MS2 62/140 Linfeng_122411_rIgG_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 29 8.65 0.00 0 4 11 3 944.40466 2831.19944 1.80 38.57 3871 3871 MS2 62/140 Linfeng_122411_rIgG_3.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 18 8.14 0.00 0 6 16 3 944.40045 2831.18680 -2.67 39.32 4698 4698 MS2 60/140 Linfeng_091311_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 38 7.87 0.00 0 11 100 3 944.40857 2831.21115 5.94 47.74 7357 7357 MS2 58/140 Linfeng_20120125_PCAF_1.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 20 7.84 0.00 0 10 25 3 944.40143 2831.18973 -1.63 39.37 4640 4640 MS2 62/140 Linfeng_091311_rIgG_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 41 7.56 0.00 0 16 100 3 944.40906 2831.21262 6.45 47.64 7331 7331 MS2 57/140 Linfeng_20120125_PCAF_1.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 32 7.41 0.00 0 4 25 3 944.40564 2831.20237 2.83 38.67 4069 4069 MS2 61/140 Linfeng_122411_rIgG_6.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 20 7.39 0.00 0 10 25 3 944.40228 2831.19229 -0.73 39.37 4646 4646 MS2 55/140 Linfeng_091311_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 149 7.03 0.00 0 9 10 4 1023.77374 4092.07314 0.07 43.10 4831 4831 MS2 59/258 Linfeng_122411_rIgG_5.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 155 6.92 0.00 0 9 10 4 1023.77136 4092.06362 -2.26 43.90 5032 5032 MS2 57/258 Linfeng_091311_rIgG_1.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 139 6.74 0.00 0 4 25 4 1023.77655 4092.08437 2.82 43.22 4473 4473 MS2 58/258 Linfeng_122411_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 130 6.69 0.00 0 0 25 4 1023.77753 4092.08828 3.77 43.29 4492 4492 MS2 58/258 Linfeng_122411_rIgG_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 6.55 0.00 0 3 10 4 1023.77301 4092.07021 -0.65 44.04 5298 5298 MS2 58/258 Linfeng_091311_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 19 6.25 0.00 0 21 25 3 944.40009 2831.18570 -3.05 39.65 4654 4654 MS2 50/140 Linfeng_091311_rIgG_6.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 6.05 0.00 0 8 25 4 1023.77307 4092.07046 -0.59 44.14 5240 5240 MS2 57/258 Linfeng_091311_rIgG_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 263 6.02 0.00 0 0 25 3 1016.84033 3048.50644 3.96 40.85 4182 4182 MS2 47/104 Linfeng_122411_rIgG_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 5.93 0.00 0 4 25 4 1023.77307 4092.07046 -0.59 44.08 5235 5235 MS2 55/258 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 158 5.79 0.00 0 6 19 4 1023.77118 4092.06289 -2.44 44.35 5228 5228 MS2 60/258 Linfeng_091311_rIgG_5.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 5.78 0.00 2 6 25 4 642.32599 2566.28213 1.43 29.41 2724 2724 MS2 47/126 Linfeng_122411_rIgG_2.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 180 5.58 0.00 1 4 25 3 715.73419 2145.18802 3.62 40.93 4192 4192 MS2 35/68 Linfeng_122411_rIgG_2.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 5.36 0.00 2 5 25 3 856.09998 2566.28537 2.69 29.57 2745 2745 MS2 35/84 Linfeng_122411_rIgG_2.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 318 5.34 0.00 2 8 25 4 642.32611 2566.28261 1.62 29.40 2692 2692 MS2 45/126 Linfeng_122411_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 154 5.24 0.00 0 1 25 3 1364.69336 4092.06552 -1.79 44.08 5302 5302 MS2 44/172 Linfeng_091311_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 5.10 0.00 0 4 25 2 919.96198 1838.91667 1.18 35.44 3471 3471 MS2 28/42 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 349 5.09 0.00 2 5 25 3 733.38739 2198.14762 2.89 41.27 4234 4234 MS2 36/72 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 347 5.09 0.00 2 4 25 3 733.38806 2198.14963 3.81 41.20 4338 4338 MS2 33/72 Linfeng_122411_rIgG_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 327 5.08 0.00 2 16 25 4 642.32629 2566.28335 1.90 29.49 2906 2906 MS2 44/126 Linfeng_122411_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 5.05 0.00 0 3 25 2 919.96283 1838.91838 2.11 35.41 3494 3494 MS2 27/42 Linfeng_122411_rIgG_2.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 200 5.00 0.00 1 12 25 3 715.73328 2145.18528 2.34 41.02 4188 4188 MS2 35/68 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 4.97 0.00 0 8 25 3 613.64368 1838.91648 1.07 35.42 3469 3469 MS2 42/84 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 4.94 0.00 2 3 25 3 733.38702 2198.14652 2.39 41.39 4235 4235 MS2 34/72 Linfeng_122411_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 4.85 0.00 0 3 16 3 487.60538 1460.80158 1.36 42.39 4366 4366 MS2 30/44 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 4.83 0.00 2 6 25 4 550.29242 2198.14785 3.00 41.19 4337 4337 MS2 46/108 Linfeng_122411_rIgG_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 4.80 0.00 2 6 25 3 733.38763 2198.14835 3.22 41.40 4408 4408 MS2 31/72 Linfeng_122411_rIgG_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.75 0.00 1 2 5 3 752.68713 2256.04685 0.84 33.89 3276 3276 MS2 31/72 Linfeng_122411_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.74 0.00 0 29 25 3 487.60568 1460.80249 1.99 42.44 4539 4539 MS2 30/44 Linfeng_122411_rIgG_6.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 329 4.73 0.00 2 10 100 4 642.32965 2566.29677 7.14 41.34 5196 5196 MS2 41/126 Linfeng_20120125_PCAF_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 454 4.73 0.00 0 3 25 3 487.60330 1460.79535 -2.90 43.28 4952 4952 MS2 30/44 Linfeng_091311_rIgG_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 4.72 0.00 1 12 100 3 752.69208 2256.06168 7.41 42.21 5083 5083 MS2 26/72 Linfeng_20120125_PCAF_3.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 380 4.70 0.00 2 4 17 4 550.29193 2198.14589 2.11 41.38 4234 4234 MS2 45/108 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 4.66 0.00 2 0 10 4 550.29083 2198.14150 0.11 41.11 4560 4560 MS2 43/108 Linfeng_122411_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 4.64 0.00 0 7 25 3 487.60608 1460.80368 2.80 42.26 4471 4471 MS2 31/44 Linfeng_122411_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 464 4.64 0.00 0 1 12 3 487.60428 1460.79828 -0.90 42.31 4727 4727 MS2 31/44 Linfeng_122411_rIgG_5.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 356 4.60 0.00 2 10 25 4 550.29218 2198.14687 2.55 41.41 4409 4409 MS2 44/108 Linfeng_122411_rIgG_6.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 397 4.59 0.00 0 7 13 3 487.60580 1460.80286 2.24 42.47 4387 4387 MS2 31/44 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 37 4.57 0.00 0 9 25 2 871.37592 1741.74455 -2.29 18.25 1811 1811 MS2 25/44 Linfeng_091311_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 4.55 0.00 0 2 100 2 919.96747 1838.92766 7.15 46.17 5864 5864 MS2 28/42 Linfeng_20120125_PCAF_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 4.54 0.00 0 38 25 2 919.95673 1838.90618 -4.53 37.32 4437 4437 MS2 28/42 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 356 4.53 0.00 2 2 25 4 550.29224 2198.14712 2.66 41.26 4233 4233 MS2 44/108 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 298 4.52 0.00 0 9 100 2 919.96771 1838.92815 7.42 45.13 5626 5626 MS2 28/42 Linfeng_20120125_PCAF_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.52 0.00 0 3 25 3 487.60568 1460.80249 1.99 42.44 3975 3975 MS2 31/44 Linfeng_122411_rIgG_7.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 39 4.51 0.00 0 0 25 2 871.37585 1741.74443 -2.36 18.29 1805 1805 MS2 24/44 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 160 4.51 0.00 1 4 25 3 752.68616 2256.04392 -0.46 33.86 3299 3299 MS2 25/72 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.50 0.00 0 15 25 3 487.60571 1460.80259 2.05 42.39 4244 4244 MS2 31/44 Linfeng_122411_rIgG_10.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 140 4.49 0.00 1 5 10 3 752.68408 2256.03769 -3.22 34.69 4041 4041 MS2 29/72 Linfeng_091311_rIgG_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 4.47 0.00 2 8 100 3 856.10413 2566.29782 7.55 41.26 5355 5355 MS2 36/84 Linfeng_20120125_PCAF_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 331 4.46 0.00 0 11 25 3 613.64410 1838.91776 1.77 35.40 3493 3493 MS2 40/84 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 41 4.45 0.00 0 3 25 2 871.37610 1741.74492 -2.08 18.50 1881 1881 MS2 24/44 Linfeng_091311_rIgG_8.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 283 4.45 0.00 2 13 45 2 1099.58130 2198.15532 6.40 55.32 7772 7772 MS2 27/36 Linfeng_20120125_PCAF_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.45 0.00 1 4 25 3 752.68701 2256.04648 0.68 33.77 3404 3404 MS2 27/72 Linfeng_122411_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 461 4.43 0.00 0 0 25 3 487.60388 1460.79709 -1.71 43.38 5214 5214 MS2 30/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 4.42 0.00 2 8 12 3 733.38562 2198.14231 0.48 41.12 4562 4562 MS2 34/72 Linfeng_122411_rIgG_5.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 4.41 0.00 2 1 25 3 733.38354 2198.13608 -2.36 41.91 5029 5029 MS2 35/72 Linfeng_091311_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 302 4.36 0.00 0 4 100 2 919.96515 1838.92302 4.63 48.22 7478 7478 MS2 28/42 Linfeng_20120125_PCAF_1.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 4.35 0.00 2 9 100 3 856.10370 2566.29654 7.05 41.46 4919 4919 MS2 34/84 Linfeng_20120125_PCAF_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 302 4.32 0.00 0 3 100 2 919.96631 1838.92534 5.89 44.93 5745 5745 MS2 28/42 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 4.31 0.00 0 34 100 2 738.40143 1475.79558 6.95 29.07 2482 2482 MS2 20/22 Linfeng_20120125_PCAF_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 4.30 0.00 0 20 100 2 919.96606 1838.92485 5.62 48.20 6833 6833 MS2 27/42 Linfeng_20120125_PCAF_4.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 4.28 0.00 0 0 25 2 794.84650 1588.68572 1.42 14.68 1266 1266 MS2 26/38 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 132 4.25 0.00 0 18 100 2 1064.48621 2127.96514 7.12 45.59 5918 5918 MS2 18/34 Linfeng_20120125_PCAF_7.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 4.25 0.00 2 4 13 3 733.38928 2198.15329 5.47 55.31 7769 7769 MS2 32/72 Linfeng_20120125_PCAF_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 43 4.23 0.00 0 3 25 2 871.37543 1741.74358 -2.86 18.52 1854 1854 MS2 24/44 Linfeng_091311_rIgG_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 164 4.23 0.00 1 1 25 3 752.68634 2256.04447 -0.21 33.92 3160 3160 MS2 29/72 Linfeng_122411_rIgG_10.raw High HGDSLKEIKIEISELNR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 4.23 0.00 2 12 25 4 496.02411 1981.07461 1.63 33.50 3253 3253 MS2 42/96 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 114 4.22 0.00 0 20 100 2 1064.48450 2127.96172 5.52 45.45 5869 5869 MS2 21/34 Linfeng_20120125_PCAF_3.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 264 4.20 0.00 0 10 25 4 762.88184 3048.50551 3.66 40.83 4180 4180 MS2 42/156 Linfeng_122411_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.20 0.00 1 2 25 3 752.68701 2256.04648 0.68 34.00 3487 3487 MS2 28/72 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.19 0.00 0 34 98 2 738.40088 1475.79448 6.21 27.83 2583 2583 MS2 20/22 Linfeng_20120125_PCAF_1.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 304 4.18 0.00 2 12 100 3 856.10254 2566.29306 5.69 41.20 4858 4858 MS2 33/84 Linfeng_20120125_PCAF_7.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 125 4.16 0.00 0 18 100 2 1064.48535 2127.96343 6.32 45.65 5746 5746 MS2 21/34 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 4.15 0.00 0 34 100 2 738.40063 1475.79399 5.88 29.06 2315 2315 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 414 4.15 0.00 0 40 100 2 738.40167 1475.79607 7.28 28.89 2395 2395 MS2 20/22 Linfeng_20120125_PCAF_9.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 128 4.14 0.00 0 14 100 2 1064.48596 2127.96465 6.89 45.26 6764 6764 MS2 21/34 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 301 4.13 0.00 0 7 81 2 919.96509 1838.92290 4.56 44.61 6607 6607 MS2 28/42 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 4.13 0.00 0 12 100 2 919.96594 1838.92461 5.49 48.22 6341 6341 MS2 28/42 Linfeng_20120125_PCAF_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 473 4.12 0.00 0 2 25 3 487.60379 1460.79682 -1.90 43.60 5173 5173 MS2 30/44 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 470 4.11 0.00 0 59 25 3 487.60373 1460.79663 -2.02 43.65 5153 5153 MS2 29/44 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 4.10 0.00 2 32 25 4 550.29175 2198.14516 1.77 41.53 4181 4181 MS2 40/108 Linfeng_122411_rIgG_8.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 316 4.10 0.00 2 27 25 4 642.32416 2566.27480 -1.43 29.03 2900 2900 MS2 40/126 Linfeng_122411_rIgG_5.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 58 4.09 0.00 0 9 25 2 794.84430 1588.68132 -1.35 14.69 1335 1335 MS2 27/38 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.08 0.00 0 49 100 2 738.40100 1475.79473 6.37 28.54 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_7.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 138 4.08 0.00 1 14 25 3 752.68414 2256.03788 -3.14 34.55 4075 4075 MS2 27/72 Linfeng_091311_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 307 4.06 0.00 0 7 100 2 919.96405 1838.92082 3.43 44.23 6756 6756 MS2 25/42 Linfeng_20120125_PCAF_8.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 126 4.06 0.00 0 19 100 2 1064.48596 2127.96465 6.89 45.59 5733 5733 MS2 21/34 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.06 0.00 0 13 42 2 738.40063 1475.79399 5.88 27.70 2555 2555 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 4.05 0.00 0 35 100 2 738.40100 1475.79473 6.37 27.97 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.05 0.00 0 33 100 2 738.40045 1475.79363 5.63 27.85 2450 2450 MS2 20/22 Linfeng_20120125_PCAF_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 311 4.05 0.00 0 66 100 2 919.96313 1838.91899 2.44 43.60 6361 6361 MS2 26/42 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 299 4.04 0.00 0 16 100 2 919.96899 1838.93071 8.81 47.13 6272 6272 MS2 27/42 Linfeng_20120125_PCAF_3.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 4.03 0.00 0 38 25 2 919.95984 1838.91240 -1.15 58.60 6931 6931 MS2 22/42 Linfeng_091311_rIgG_2.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 127 4.03 0.00 0 0 100 2 1064.48608 2127.96489 7.01 45.68 5940 5940 MS2 21/34 Linfeng_20120125_PCAF_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 317 4.03 0.00 0 4 100 2 919.96631 1838.92534 5.89 44.71 5910 5910 MS2 25/42 Linfeng_20120125_PCAF_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 336 4.03 0.00 0 15 25 2 730.90558 1460.80388 2.94 42.44 4383 4383 MS2 19/22 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 4.02 0.00 0 37 100 2 738.40094 1475.79460 6.29 28.65 2869 2869 MS2 20/22 Linfeng_20120125_PCAF_5.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 206 4.02 0.00 1 5 100 2 1128.53552 2256.06377 8.34 42.15 6012 6012 MS2 22/36 Linfeng_20120125_PCAF_1.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 313 4.02 0.00 1 18 25 3 464.56396 1391.67734 -2.04 18.01 1783 1783 MS2 23/44 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 4.01 0.00 1 10 25 3 538.62213 1613.85184 1.51 34.68 3376 3376 MS2 29/52 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 395 4.01 0.00 1 12 11 3 538.62000 1613.84543 -2.46 35.47 4142 4142 MS2 30/52 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 296 4.01 0.00 0 3 100 2 919.96857 1838.92986 8.34 45.27 6331 6331 MS2 28/42 Linfeng_20120125_PCAF_6.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 4.00 0.00 0 7 13 3 457.90704 1371.70658 -3.59 34.61 4083 4083 MS2 30/44 Linfeng_091311_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 40 3.99 0.00 0 1 25 2 871.37573 1741.74419 -2.51 18.42 1862 1862 MS2 25/44 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 430 3.99 0.00 0 35 100 2 738.40155 1475.79582 7.12 27.90 2225 2225 MS2 19/22 Linfeng_20120125_PCAF_9.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 3.98 0.00 1 13 100 3 752.69171 2256.06058 6.93 41.76 6125 6125 MS2 23/72 Linfeng_20120125_PCAF_8.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 135 3.96 0.00 0 4 25 5 819.22290 4092.08540 3.07 43.40 4497 4497 MS2 52/344 Linfeng_122411_rIgG_3.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 60 3.96 0.00 0 7 25 2 794.84485 1588.68242 -0.66 14.93 1357 1357 MS2 28/38 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.95 0.00 0 36 100 2 738.40094 1475.79460 6.29 28.05 2304 2304 MS2 20/22 Linfeng_20120125_PCAF_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 307 3.95 0.00 0 25 100 2 919.96869 1838.93010 8.48 45.54 6202 6202 MS2 26/42 Linfeng_20120125_PCAF_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 103 3.95 0.00 0 6 3 3 440.86609 1320.58371 0.61 3.14 291 291 MS2 31/60 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.95 0.00 0 38 100 2 738.40149 1475.79570 7.03 28.91 2398 2398 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.94 0.00 0 41 100 2 738.40088 1475.79448 6.21 28.61 2861 2861 MS2 20/22 Linfeng_20120125_PCAF_5.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 200 3.94 0.00 1 9 100 2 1128.53381 2256.06035 6.83 42.40 4985 4985 MS2 19/36 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 3.94 0.00 1 6 25 3 652.67395 1956.00730 2.01 41.78 4300 4300 MS2 31/64 Linfeng_122411_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 97 3.93 0.00 0 3 3 3 440.86584 1320.58298 0.05 3.25 328 328 MS2 34/60 Linfeng_122411_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 90 3.93 0.00 0 5 14 3 440.86465 1320.57941 -2.65 20.13 1817 1817 MS2 33/60 Linfeng_091311_rIgG_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.93 0.00 0 18 25 3 440.86478 1320.57978 -2.37 21.78 2303 2303 MS2 30/60 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 3.92 0.00 0 3 25 3 487.60556 1460.80213 1.74 42.65 4323 4323 MS2 29/44 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.92 0.00 0 4 2 2 738.40009 1475.79289 5.13 26.66 2303 2303 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 3.92 0.00 0 5 100 2 871.38330 1741.75932 6.19 14.71 1069 1069 MS2 24/44 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.92 0.00 0 34 100 2 738.40167 1475.79607 7.28 28.81 2272 2272 MS2 20/22 Linfeng_20120125_PCAF_3.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 206 3.91 0.00 1 0 100 2 1128.53552 2256.06377 8.34 42.49 5148 5148 MS2 20/36 Linfeng_20120125_PCAF_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 337 3.90 0.00 1 4 8 3 464.56360 1391.67624 -2.83 17.79 1735 1735 MS2 30/44 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.89 0.00 0 5 97 2 738.40143 1475.79558 6.95 27.68 2418 2418 MS2 20/22 Linfeng_20120125_PCAF_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 301 3.89 0.00 0 23 100 2 919.96692 1838.92656 6.55 45.04 5989 5989 MS2 26/42 Linfeng_20120125_PCAF_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 330 3.88 0.00 0 17 25 3 613.64417 1838.91794 1.87 36.49 3630 3630 MS2 36/84 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 404 3.88 0.00 1 20 13 3 538.61920 1613.84305 -3.93 35.39 4186 4186 MS2 30/52 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 348 3.88 0.00 2 27 100 3 733.38934 2198.15348 5.56 55.49 7814 7814 MS2 33/72 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.88 0.00 0 1 99 2 738.40143 1475.79558 6.95 27.72 2087 2087 MS2 20/22 Linfeng_20120125_PCAF_3.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 3.87 0.00 2 19 100 4 642.33032 2566.29946 8.18 41.27 5179 5179 MS2 43/126 Linfeng_20120125_PCAF_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 147 3.86 0.00 1 5 25 3 752.68445 2256.03879 -2.73 34.85 4044 4044 MS2 27/72 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 65 3.86 0.00 0 3 25 2 794.84576 1588.68425 0.50 14.31 1243 1243 MS2 28/38 Linfeng_091311_rIgG_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 3.86 0.00 2 11 100 4 642.33020 2566.29897 7.99 41.21 4854 4854 MS2 35/126 Linfeng_20120125_PCAF_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 271 3.85 0.00 0 32 100 2 919.96777 1838.92827 7.48 46.69 6676 6676 MS2 22/42 Linfeng_20120125_PCAF_6.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.85 0.00 0 5 15 3 457.90869 1371.71152 0.01 33.49 3104 3104 MS2 30/44 Linfeng_122411_rIgG_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 3.85 0.00 0 7 25 3 457.90768 1371.70850 -2.19 34.65 4035 4035 MS2 29/44 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 3.84 0.00 0 34 100 2 919.96832 1838.92937 8.08 47.43 6344 6344 MS2 25/42 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.84 0.00 0 3 6 2 738.40247 1475.79766 8.36 26.74 2428 2428 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.83 0.00 0 33 100 2 738.40210 1475.79692 7.86 28.80 2436 2436 MS2 20/22 Linfeng_20120125_PCAF_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 47 3.83 0.00 0 0 25 2 871.37659 1741.74590 -1.52 18.49 1800 1800 MS2 23/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.83 0.00 0 17 100 2 738.40173 1475.79619 7.36 29.69 2769 2769 MS2 20/22 Linfeng_20120125_PCAF_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 47 3.82 0.00 0 27 25 2 871.37769 1741.74809 -0.26 18.57 1607 1607 MS2 22/44 Linfeng_091311_rIgG_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 3.81 0.00 0 30 25 2 919.95844 1838.90959 -2.67 37.25 4371 4371 MS2 25/42 Linfeng_091311_rIgG_4.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 125 3.81 0.00 1 7 25 3 630.95630 1890.85434 -1.80 17.49 1693 1693 MS2 30/88 Linfeng_091311_rIgG_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 3.80 0.00 2 8 100 3 856.10352 2566.29599 6.83 41.39 4905 4905 MS2 32/84 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 461 3.80 0.00 0 9 25 3 487.60431 1460.79837 -0.83 43.50 5163 5163 MS2 30/44 Linfeng_091311_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 457 3.79 0.00 0 66 25 3 487.60355 1460.79609 -2.40 43.72 5155 5155 MS2 28/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.79 0.00 0 27 100 2 738.40155 1475.79582 7.12 28.04 2147 2147 MS2 20/22 Linfeng_20120125_PCAF_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 104 3.79 0.00 0 34 25 3 440.86707 1320.58664 2.83 20.89 1672 1672 MS2 29/60 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.79 0.00 1 4 11 3 538.62213 1613.85184 1.51 34.65 3399 3399 MS2 29/52 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 3.79 0.00 0 31 100 2 738.40143 1475.79558 6.95 28.11 2503 2503 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.79 0.00 0 8 100 2 738.40204 1475.79680 7.78 27.77 2669 2669 MS2 20/22 Linfeng_20120125_PCAF_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 300 3.78 0.00 0 17 100 2 919.96716 1838.92705 6.82 47.12 6081 6081 MS2 27/42 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.78 0.00 0 2 92 2 738.40106 1475.79485 6.45 27.63 2227 2227 MS2 20/22 Linfeng_20120125_PCAF_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 3.77 0.00 0 6 25 3 443.88522 1329.64112 1.29 28.09 2721 2721 MS2 28/44 Linfeng_122411_rIgG_6.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 124 3.77 0.00 0 19 100 2 1064.48633 2127.96538 7.24 45.61 6123 6123 MS2 22/34 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 436 3.77 0.00 0 35 100 2 738.40222 1475.79717 8.03 28.63 2873 2873 MS2 20/22 Linfeng_20120125_PCAF_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 3.76 0.00 0 6 25 3 443.88559 1329.64222 2.12 27.46 2579 2579 MS2 30/44 Linfeng_122411_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 3.76 0.00 1 14 100 3 752.69183 2256.06095 7.09 42.11 5070 5070 MS2 23/72 Linfeng_20120125_PCAF_7.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.75 0.00 0 2 100 2 738.40137 1475.79546 6.87 25.70 2194 2194 MS2 20/22 Linfeng_20120125_PCAF_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 257 3.75 0.00 0 3 25 2 665.32452 1329.64177 1.78 28.08 2720 2720 MS2 19/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.75 0.00 0 3 100 2 738.40100 1475.79473 6.37 27.73 2234 2234 MS2 20/22 Linfeng_20120125_PCAF_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 3.75 0.00 2 2 25 4 550.28894 2198.13393 -3.33 41.86 5022 5022 MS2 39/108 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.74 0.00 1 28 25 3 538.62231 1613.85239 1.85 34.99 3610 3610 MS2 29/52 Linfeng_122411_rIgG_6.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 331 3.73 0.00 1 23 25 3 464.56354 1391.67606 -2.96 17.98 1748 1748 MS2 26/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.73 0.00 0 55 100 2 738.40118 1475.79509 6.62 29.70 2582 2582 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.72 0.00 0 57 100 2 738.40063 1475.79399 5.88 29.68 3021 3021 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 310 3.72 0.00 0 29 100 2 919.96460 1838.92192 4.03 44.13 5394 5394 MS2 24/42 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 3.72 0.00 1 12 25 3 652.67395 1956.00730 2.01 41.72 4449 4449 MS2 32/64 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 60 3.71 0.00 0 18 25 2 794.84540 1588.68352 0.04 14.58 1358 1358 MS2 24/38 Linfeng_091311_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 3.71 0.00 0 4 24 3 443.88535 1329.64148 1.57 27.07 2412 2412 MS2 27/44 Linfeng_122411_rIgG_2.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.71 0.00 1 15 25 3 652.67328 1956.00528 0.98 41.83 4292 4292 MS2 30/64 Linfeng_122411_rIgG_3.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.71 0.00 0 3 25 2 870.85547 1740.70366 -1.13 17.40 1692 1692 MS2 27/38 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 3.70 0.00 1 19 100 3 464.56775 1391.68869 6.12 17.50 1285 1285 MS2 22/44 Linfeng_20120125_PCAF_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 3.70 0.00 0 22 100 2 919.96686 1838.92644 6.49 44.23 6077 6077 MS2 24/42 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.70 0.00 0 40 100 2 738.40137 1475.79546 6.87 28.12 2210 2210 MS2 20/22 Linfeng_20120125_PCAF_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 325 3.69 0.00 0 32 25 3 613.64258 1838.91318 -0.72 35.87 3669 3669 MS2 34/84 Linfeng_122411_rIgG_4.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 11 3.69 0.00 0 0 25 2 870.85333 1740.69939 -3.59 17.67 1798 1798 MS2 26/38 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.69 0.00 0 38 100 2 738.40179 1475.79631 7.45 27.90 2702 2702 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 291 3.69 0.00 0 66 25 2 919.96191 1838.91655 1.11 58.13 6767 6767 MS2 18/42 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 440 3.69 0.00 0 3 11 2 738.40253 1475.79778 8.44 26.70 2016 2016 MS2 20/22 Linfeng_20120125_PCAF_9.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 134 3.69 0.00 1 3 25 3 752.68396 2256.03733 -3.38 34.57 4033 4033 MS2 27/72 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 3.69 0.00 0 12 25 3 443.88556 1329.64212 2.05 27.04 2380 2380 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.68 0.00 1 21 25 3 538.62103 1613.84854 -0.53 4.65 495 495 MS2 29/52 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.67 0.00 0 49 100 2 738.40167 1475.79607 7.28 29.54 2744 2744 MS2 20/22 Linfeng_20120125_PCAF_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 43 3.67 0.00 0 4 25 2 871.37622 1741.74516 -1.94 18.54 1826 1826 MS2 25/44 Linfeng_091311_rIgG_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 3.67 0.00 0 20 100 2 919.96808 1838.92888 7.81 45.56 6112 6112 MS2 25/42 Linfeng_20120125_PCAF_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 304 3.67 0.00 0 9 100 2 919.96533 1838.92339 4.83 44.31 6779 6779 MS2 25/42 Linfeng_20120125_PCAF_8.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 3.67 0.00 0 2 13 2 686.35944 1371.71160 0.07 33.48 3103 3103 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 389 3.66 0.00 0 2 6 2 738.39984 1475.79241 4.80 26.71 2410 2410 MS2 20/22 Linfeng_20120125_PCAF_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.66 0.00 0 7 13 2 686.35675 1371.70622 -3.85 34.49 4068 4068 MS2 20/22 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 3.66 0.00 0 22 25 2 665.32489 1329.64250 2.33 27.01 2403 2403 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High HGDSLKEIKIEISELNR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 3.65 0.00 2 17 25 4 496.02448 1981.07607 2.37 33.54 3231 3231 MS2 38/96 Linfeng_122411_rIgG_3.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 316 3.65 0.00 2 6 100 4 642.32898 2566.29409 6.09 40.97 4803 4803 MS2 39/126 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 236 3.65 0.00 0 4 6 2 665.32349 1329.63970 0.22 4.42 488 488 MS2 19/22 Linfeng_122411_rIgG_10.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 117 3.65 0.00 1 6 25 3 630.95599 1890.85343 -2.29 17.72 1744 1744 MS2 33/88 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.64 0.00 0 33 100 2 738.40198 1475.79668 7.70 28.58 2863 2863 MS2 19/22 Linfeng_20120125_PCAF_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 292 3.63 0.00 0 14 100 2 919.96710 1838.92693 6.75 46.98 6744 6744 MS2 25/42 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 334 3.63 0.00 1 20 25 3 464.56357 1391.67615 -2.90 17.66 1728 1728 MS2 27/44 Linfeng_091311_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 283 3.63 0.00 0 5 100 2 919.96692 1838.92656 6.55 45.62 6849 6849 MS2 27/42 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 3.63 0.00 0 5 2 2 627.80719 1254.60710 -0.21 4.33 474 474 MS2 22/26 Linfeng_122411_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 258 3.63 0.00 0 11 25 3 443.88370 1329.63654 -2.15 28.90 3279 3279 MS2 26/44 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 462 3.61 0.00 0 0 25 3 487.60269 1460.79352 -4.16 43.66 5139 5139 MS2 29/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 3.61 0.00 0 37 5 3 443.88486 1329.64002 0.46 4.43 490 490 MS2 30/44 Linfeng_122411_rIgG_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 3.61 0.00 0 7 100 2 919.96649 1838.92571 6.09 48.24 6556 6556 MS2 24/42 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.61 0.00 0 46 100 2 738.40161 1475.79595 7.20 28.52 2278 2278 MS2 20/22 Linfeng_20120125_PCAF_7.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 182 3.61 0.00 1 0 100 2 1128.53455 2256.06182 7.47 42.58 5181 5181 MS2 18/36 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.60 0.00 0 3 100 2 738.40222 1475.79717 8.03 27.71 2191 2191 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.60 0.00 1 6 25 3 464.56409 1391.67771 -1.78 18.03 1733 1733 MS2 25/44 Linfeng_091311_rIgG_5.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 53 3.59 0.00 0 23 25 2 871.38098 1741.75469 3.52 17.34 1410 1410 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.59 0.00 0 3 100 2 738.40155 1475.79582 7.12 27.69 2141 2141 MS2 20/22 Linfeng_20120125_PCAF_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.59 0.00 0 4 25 2 665.32495 1329.64263 2.43 27.03 2379 2379 MS2 19/22 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 374 3.59 0.00 0 6 22 2 686.35730 1371.70732 -3.05 34.82 4041 4041 MS2 20/22 Linfeng_091311_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.59 0.00 0 3 25 2 870.85565 1740.70403 -0.92 17.71 1709 1709 MS2 26/38 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 305 3.58 0.00 0 9 100 2 919.96722 1838.92717 6.88 47.05 6269 6269 MS2 24/42 Linfeng_20120125_PCAF_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.58 0.00 0 5 25 2 665.32214 1329.63701 -1.80 28.84 3278 3278 MS2 19/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.58 0.00 0 4 6 2 738.40179 1475.79631 7.45 26.65 2220 2220 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.58 0.00 0 46 100 2 738.40088 1475.79448 6.21 30.13 3131 3131 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 251 3.58 0.00 0 19 25 2 665.32452 1329.64177 1.78 27.40 2572 2572 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.57 0.00 0 12 25 3 440.86517 1320.58097 -1.47 21.51 2265 2265 MS2 33/60 Linfeng_091311_rIgG_3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 59 3.57 0.00 0 4 25 2 871.38074 1741.75420 3.24 17.43 1406 1406 MS2 21/44 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.57 0.00 0 49 100 2 738.40106 1475.79485 6.45 29.61 2739 2739 MS2 20/22 Linfeng_20120125_PCAF_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 393 3.57 0.00 1 4 22 3 538.62000 1613.84543 -2.46 35.44 4147 4147 MS2 31/52 Linfeng_091311_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 91 3.56 0.00 0 13 25 3 440.86508 1320.58069 -1.68 21.53 2261 2261 MS2 31/60 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 325 3.56 0.00 2 76 100 4 642.32977 2566.29726 7.33 41.83 5493 5493 MS2 41/126 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 248 3.55 0.00 0 4 25 2 665.32361 1329.63994 0.41 26.67 2574 2574 MS2 19/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.55 0.00 0 32 100 2 738.40167 1475.79607 7.28 30.64 2946 2946 MS2 19/22 Linfeng_20120125_PCAF_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 3.55 0.00 0 7 100 2 871.38361 1741.75994 6.54 14.80 935 935 MS2 22/44 Linfeng_20120125_PCAF_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 199 3.55 0.00 1 0 100 2 1128.53601 2256.06474 8.77 42.71 5053 5053 MS2 19/36 Linfeng_20120125_PCAF_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 55 3.54 0.00 0 0 25 2 794.84412 1588.68096 -1.58 14.59 1325 1325 MS2 21/38 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 214 3.54 0.00 1 24 100 3 752.69122 2256.05912 6.28 41.97 5968 5968 MS2 28/72 Linfeng_20120125_PCAF_1.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.53 0.00 0 4 25 2 870.85486 1740.70244 -1.83 17.47 1727 1727 MS2 26/38 Linfeng_091311_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 334 3.53 0.00 1 35 25 3 464.56332 1391.67542 -3.42 17.70 1759 1759 MS2 26/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 405 3.53 0.00 1 19 25 3 538.62231 1613.85239 1.85 34.66 3517 3517 MS2 29/52 Linfeng_122411_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 260 3.53 0.00 0 11 25 3 443.88354 1329.63608 -2.50 28.85 3279 3279 MS2 25/44 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 265 3.52 0.00 0 9 7 3 443.88333 1329.63544 -2.98 29.08 3036 3036 MS2 28/44 Linfeng_091311_rIgG_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 3.52 0.00 0 5 25 2 665.32147 1329.63567 -2.81 28.98 3022 3022 MS2 19/22 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.52 0.00 0 2 11 2 686.35687 1371.70647 -3.67 34.54 4029 4029 MS2 20/22 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 229 3.52 0.00 0 6 25 2 665.32184 1329.63640 -2.26 29.21 3292 3292 MS2 19/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.51 0.00 0 52 100 2 738.40131 1475.79534 6.79 28.34 2248 2248 MS2 19/22 Linfeng_20120125_PCAF_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 305 3.51 0.00 0 65 100 2 919.96338 1838.91948 2.70 43.55 6349 6349 MS2 28/42 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.51 0.00 0 11 100 2 738.40149 1475.79570 7.03 25.74 2121 2121 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 420 3.51 0.00 0 23 100 2 738.40149 1475.79570 7.03 25.71 1781 1781 MS2 18/22 Linfeng_20120125_PCAF_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 77 3.50 0.00 0 17 25 2 660.79456 1320.58183 -0.82 21.59 2269 2269 MS2 25/30 Linfeng_091311_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 86 3.50 0.00 0 11 18 3 440.86453 1320.57904 -2.93 21.50 2293 2293 MS2 32/60 Linfeng_091311_rIgG_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.50 0.00 0 4 13 2 686.36420 1371.72112 7.01 41.30 5809 5809 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 3.50 0.00 0 2 25 2 870.85522 1740.70317 -1.41 17.75 1748 1748 MS2 27/38 Linfeng_091311_rIgG_6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 68 3.50 0.00 0 41 25 3 440.86343 1320.57575 -5.42 21.78 2342 2342 MS2 32/60 Linfeng_091311_rIgG_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 80 3.50 0.00 0 10 25 2 660.79407 1320.58086 -1.55 21.63 2281 2281 MS2 22/30 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 223 3.49 0.00 0 12 25 2 665.32166 1329.63603 -2.53 29.15 3249 3249 MS2 19/22 Linfeng_091311_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 259 3.49 0.00 0 9 25 3 443.88358 1329.63617 -2.43 29.19 3307 3307 MS2 28/44 Linfeng_091311_rIgG_6.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 427 3.48 0.00 0 8 6 2 730.90302 1460.79875 -0.57 42.29 4724 4724 MS2 18/22 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.48 0.00 0 6 3 2 686.35663 1371.70598 -4.02 34.70 3790 3790 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 87 3.48 0.00 0 9 25 3 440.86441 1320.57868 -3.21 21.89 2289 2289 MS2 32/60 Linfeng_091311_rIgG_7.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.48 0.00 0 0 25 2 870.85455 1740.70183 -2.18 17.70 1766 1766 MS2 26/38 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.48 0.00 0 3 14 2 738.40198 1475.79668 7.70 26.75 2267 2267 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.48 0.00 0 4 19 2 738.40240 1475.79753 8.27 26.68 2003 2003 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.48 0.00 0 4 8 2 738.40216 1475.79704 7.94 26.72 1917 1917 MS2 20/22 Linfeng_20120125_PCAF_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 251 3.48 0.00 0 12 13 2 627.80725 1254.60723 -0.12 3.24 305 305 MS2 21/26 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 344 3.47 0.00 0 61 25 2 730.90558 1460.80388 2.94 42.49 4139 4139 MS2 18/22 Linfeng_122411_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 3.47 0.00 0 6 25 2 665.32208 1329.63689 -1.89 28.85 3273 3273 MS2 19/22 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 284 3.47 0.00 0 10 25 3 443.88489 1329.64011 0.53 26.67 2575 2575 MS2 28/44 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 357 3.47 0.00 0 24 25 2 730.90479 1460.80229 1.85 42.37 3967 3967 MS2 19/22 Linfeng_122411_rIgG_7.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 387 3.46 0.00 0 5 25 2 686.35986 1371.71245 0.69 33.70 3279 3279 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.46 0.00 0 4 6 2 738.40149 1475.79570 7.03 26.71 2034 2034 MS2 20/22 Linfeng_20120125_PCAF_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 125 3.46 0.00 0 21 100 2 660.80072 1320.59416 8.52 23.53 1684 1684 MS2 22/30 Linfeng_20120125_PCAF_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 137 3.45 0.00 0 29 100 2 660.80048 1320.59368 8.15 23.56 1688 1688 MS2 23/30 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.45 0.00 0 24 25 2 730.90167 1460.79607 -2.41 43.26 5200 5200 MS2 19/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 349 3.44 0.00 0 2 78 2 738.39935 1475.79143 4.14 25.73 2183 2183 MS2 18/22 Linfeng_20120125_PCAF_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 252 3.44 0.00 0 3 32 2 665.32764 1329.64800 6.46 27.90 2696 2696 MS2 19/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.44 0.00 0 54 100 2 738.40057 1475.79387 5.79 29.60 3002 3002 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.44 0.00 0 4 9 2 738.40198 1475.79668 7.70 26.61 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 3.44 0.00 0 31 25 2 665.32166 1329.63603 -2.53 29.15 3282 3282 MS2 19/22 Linfeng_091311_rIgG_9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.44 0.00 0 3 16 2 627.80524 1254.60320 -3.33 22.33 2410 2410 MS2 23/26 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 3.42 0.00 0 4 11 2 730.90198 1460.79668 -1.99 43.19 4941 4941 MS2 19/22 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 353 3.42 0.00 0 5 10 2 686.35754 1371.70781 -2.69 34.60 4028 4028 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.42 0.00 0 5 100 2 738.40100 1475.79473 6.37 27.78 2435 2435 MS2 20/22 Linfeng_20120125_PCAF_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 58 3.42 0.00 0 0 100 2 871.38348 1741.75969 6.40 14.83 957 957 MS2 21/44 Linfeng_20120125_PCAF_9.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 325 3.40 0.00 0 7 100 3 820.07446 2458.20884 4.47 44.54 6591 6591 MS2 31/96 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 3.39 0.00 0 15 100 2 919.96863 1838.92998 8.41 45.43 6082 6082 MS2 24/42 Linfeng_20120125_PCAF_9.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 3.39 0.00 0 5 100 2 871.38330 1741.75932 6.19 14.79 976 976 MS2 23/44 Linfeng_20120125_PCAF_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 232 3.39 0.00 0 11 17 2 665.32129 1329.63530 -3.08 28.87 3319 3319 MS2 19/22 Linfeng_091311_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 428 3.39 0.00 0 11 25 2 730.90167 1460.79607 -2.41 43.60 5141 5141 MS2 19/22 Linfeng_091311_rIgG_7.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 3.38 0.00 2 37 100 3 856.10394 2566.29728 7.33 40.87 5261 5261 MS2 32/84 Linfeng_20120125_PCAF_6.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 3.38 0.00 2 31 100 4 642.33099 2566.30214 9.23 41.92 5513 5513 MS2 40/126 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.38 0.00 0 71 100 2 738.40155 1475.79582 7.12 30.39 2890 2890 MS2 19/22 Linfeng_20120125_PCAF_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.37 0.00 0 3 25 2 870.85602 1740.70476 -0.50 17.65 1678 1678 MS2 27/38 Linfeng_091311_rIgG_5.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 138 3.37 0.00 0 6 25 2 599.27747 1197.54766 -1.56 16.83 1600 1600 MS2 23/28 Linfeng_091311_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 78 3.37 0.00 0 9 25 2 660.79370 1320.58013 -2.11 21.89 2318 2318 MS2 23/30 Linfeng_091311_rIgG_6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 80 3.37 0.00 0 23 25 2 660.79376 1320.58025 -2.02 21.58 2305 2305 MS2 22/30 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.36 0.00 0 7 25 2 665.32147 1329.63567 -2.81 28.96 3390 3390 MS2 19/22 Linfeng_091311_rIgG_10.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 3.36 0.00 1 10 25 3 652.67419 1956.00803 2.39 41.63 4393 4393 MS2 27/64 Linfeng_122411_rIgG_4.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 3.35 0.00 0 3 40 2 686.36383 1371.72038 6.48 41.55 5867 5867 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 263 3.35 0.00 0 9 25 3 443.88336 1329.63553 -2.91 28.89 3322 3322 MS2 27/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 3.35 0.00 2 11 25 3 733.38647 2198.14487 1.64 41.59 3868 3868 MS2 31/72 Linfeng_122411_rIgG_7.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 315 3.35 0.00 2 22 100 3 856.10400 2566.29746 7.40 41.01 5297 5297 MS2 33/84 Linfeng_20120125_PCAF_6.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.35 0.00 0 4 25 2 730.90515 1460.80303 2.35 42.38 4243 4243 MS2 20/22 Linfeng_122411_rIgG_10.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 3.34 0.00 0 3 25 2 730.90594 1460.80461 3.44 42.20 4464 4464 MS2 19/22 Linfeng_122411_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 234 3.34 0.00 0 20 25 2 665.32111 1329.63494 -3.36 29.15 3347 3347 MS2 19/22 Linfeng_091311_rIgG_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 88 3.34 0.00 0 31 25 3 440.86475 1320.57969 -2.44 21.67 2368 2368 MS2 32/60 Linfeng_091311_rIgG_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 315 3.33 0.00 0 26 100 2 919.96655 1838.92583 6.15 43.43 6591 6591 MS2 22/42 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 3.33 0.00 0 0 100 2 738.40051 1475.79375 5.71 25.61 1927 1927 MS2 19/22 Linfeng_20120125_PCAF_2.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 333 3.33 0.00 0 11 100 3 820.07727 2458.21726 7.90 41.48 5851 5851 MS2 27/96 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.33 0.00 0 38 25 2 627.80914 1254.61101 2.90 21.31 1615 1615 MS2 17/26 Linfeng_122411_rIgG_10.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 3.32 0.00 0 3 4 2 730.90479 1460.80229 1.85 42.38 4364 4364 MS2 19/22 Linfeng_122411_rIgG_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 312 3.32 0.00 1 13 25 2 696.34155 1391.67583 -3.13 17.84 1778 1778 MS2 19/22 Linfeng_091311_rIgG_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 3.32 0.00 0 19 25 2 627.80530 1254.60332 -3.23 21.66 2030 2030 MS2 21/26 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 3.31 0.00 0 9 25 3 457.90729 1371.70731 -3.06 34.62 4038 4038 MS2 28/44 Linfeng_091311_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 3.31 0.00 0 31 25 2 730.90204 1460.79680 -1.91 43.68 5248 5248 MS2 18/22 Linfeng_091311_rIgG_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.31 0.00 0 26 25 2 665.32172 1329.63616 -2.44 29.09 3293 3293 MS2 19/22 Linfeng_091311_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.31 0.00 0 0 25 2 870.85620 1740.70513 -0.29 17.75 1694 1694 MS2 26/38 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 307 3.31 0.00 0 6 100 2 919.96796 1838.92864 7.68 48.22 7045 7045 MS2 26/42 Linfeng_20120125_PCAF_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 48 3.31 0.00 0 0 25 2 871.37671 1741.74614 -1.38 18.54 1805 1805 MS2 20/44 Linfeng_091311_rIgG_9.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.30 0.00 1 9 25 3 652.67114 1955.99887 -2.29 42.53 5108 5108 MS2 30/64 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.30 0.00 0 61 100 2 738.40021 1475.79314 5.30 30.32 3176 3176 MS2 20/22 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.30 0.00 0 8 2 2 627.80743 1254.60759 0.18 3.41 354 354 MS2 22/26 Linfeng_122411_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 3.30 0.00 0 11 100 2 919.96588 1838.92449 5.42 48.30 6549 6549 MS2 27/42 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 14 25 2 870.85547 1740.70366 -1.13 17.42 1682 1682 MS2 26/38 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 438 3.28 0.00 0 40 100 2 738.40027 1475.79326 5.38 29.89 2610 2610 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 3.28 0.00 0 14 100 2 919.96606 1838.92485 5.62 44.53 6832 6832 MS2 24/42 Linfeng_20120125_PCAF_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 295 3.28 0.00 0 14 100 2 919.96820 1838.92912 7.95 47.37 6840 6840 MS2 26/42 Linfeng_20120125_PCAF_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 3.28 0.00 0 15 25 2 627.80536 1254.60344 -3.13 22.52 2355 2355 MS2 22/26 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 3.28 0.00 0 4 25 2 730.90582 1460.80437 3.27 42.36 4530 4530 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 3.28 0.00 0 41 25 3 613.64130 1838.90934 -2.81 37.22 4138 4138 MS2 32/84 Linfeng_091311_rIgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 63 3.27 0.00 0 4 100 2 871.38336 1741.75945 6.26 14.95 1081 1081 MS2 21/44 Linfeng_20120125_PCAF_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 3.27 0.00 0 3 54 2 665.32837 1329.64946 7.57 28.08 2743 2743 MS2 19/22 Linfeng_20120125_PCAF_8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 59 3.27 0.00 0 0 25 2 871.38171 1741.75615 4.36 17.25 1429 1429 MS2 21/44 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 444 3.27 0.00 0 24 100 2 686.36407 1371.72087 6.83 40.76 5683 5683 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 241 3.27 0.00 0 2 32 2 665.32776 1329.64824 6.65 27.88 2266 2266 MS2 19/22 Linfeng_20120125_PCAF_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 3.26 0.00 1 20 25 3 538.62024 1613.84616 -2.01 35.71 4155 4155 MS2 27/52 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 218 3.26 0.00 1 13 100 3 752.69147 2256.05985 6.60 42.24 5322 5322 MS2 23/72 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 3.26 0.00 0 4 25 2 730.90277 1460.79827 -0.91 43.38 5146 5146 MS2 19/22 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 258 3.25 0.00 0 10 25 3 443.88361 1329.63626 -2.36 29.19 3254 3254 MS2 28/44 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.25 0.00 0 3 18 2 730.90240 1460.79753 -1.41 43.61 5148 5148 MS2 19/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 289 3.25 0.00 0 4 43 2 665.32843 1329.64958 7.66 28.07 2151 2151 MS2 19/22 Linfeng_20120125_PCAF_3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 45 3.25 0.00 0 28 25 3 581.25311 1741.74479 -2.16 18.34 1813 1813 MS2 34/88 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 128 3.24 0.00 0 24 100 2 1064.48474 2127.96221 5.74 45.49 6192 6192 MS2 19/34 Linfeng_20120125_PCAF_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 66 3.24 0.00 0 6 100 2 871.38318 1741.75908 6.05 14.88 1140 1140 MS2 22/44 Linfeng_20120125_PCAF_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 252 3.24 0.00 0 4 41 2 665.32715 1329.64702 5.73 27.93 2279 2279 MS2 19/22 Linfeng_20120125_PCAF_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.24 0.00 0 4 5 3 440.86560 1320.58225 -0.50 4.09 437 437 MS2 35/60 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 3.24 0.00 0 17 25 2 686.35699 1371.70671 -3.49 34.75 3988 3988 MS2 20/22 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 3.23 0.00 0 17 25 2 730.90259 1460.79790 -1.16 43.54 5293 5293 MS2 19/22 Linfeng_091311_rIgG_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 3.23 0.00 0 5 25 2 686.35712 1371.70696 -3.31 34.82 4031 4031 MS2 20/22 Linfeng_091311_rIgG_7.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 63 3.23 0.00 0 17 100 2 871.38342 1741.75957 6.33 14.78 1028 1028 MS2 24/44 Linfeng_20120125_PCAF_8.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.23 0.00 0 2 25 2 627.80591 1254.60454 -2.26 22.66 2396 2396 MS2 23/26 Linfeng_091311_rIgG_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 238 3.23 0.00 0 36 25 2 627.80890 1254.61052 2.51 21.42 1727 1727 MS2 19/26 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 3.23 0.00 0 26 25 2 730.90497 1460.80266 2.10 42.61 4318 4318 MS2 17/22 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 291 3.23 0.00 0 3 58 2 665.32819 1329.64910 7.29 28.16 2515 2515 MS2 19/22 Linfeng_20120125_PCAF_10.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 3.22 0.00 1 13 25 2 807.42932 1613.85137 1.22 34.72 3408 3408 MS2 22/26 Linfeng_122411_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 70 3.22 0.00 0 23 25 3 440.86411 1320.57776 -3.90 21.82 2273 2273 MS2 30/60 Linfeng_091311_rIgG_9.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 3.21 0.00 1 25 100 2 807.43317 1613.85906 5.98 43.63 6641 6641 MS2 21/26 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 149 3.21 0.00 0 4 25 2 599.27704 1197.54680 -2.27 17.12 1627 1627 MS2 21/28 Linfeng_091311_rIgG_7.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.20 0.00 0 3 24 2 730.90234 1460.79741 -1.49 43.34 5144 5144 MS2 19/22 Linfeng_091311_rIgG_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.20 0.00 1 41 100 3 464.56747 1391.68787 5.52 17.78 1265 1265 MS2 20/44 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.20 0.00 0 9 100 2 686.36438 1371.72148 7.28 41.74 5289 5289 MS2 20/22 Linfeng_20120125_PCAF_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 219 3.20 0.00 1 30 100 3 752.69141 2256.05967 6.52 42.64 5039 5039 MS2 24/72 Linfeng_20120125_PCAF_2.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 3.20 0.00 2 24 100 4 642.32971 2566.29702 7.23 40.74 5231 5231 MS2 38/126 Linfeng_20120125_PCAF_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 274 3.19 0.00 0 17 42 2 665.32782 1329.64836 6.74 27.48 2502 2502 MS2 19/22 Linfeng_20120125_PCAF_1.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 318 3.19 0.00 2 15 100 3 856.10315 2566.29489 6.40 41.85 5499 5499 MS2 29/84 Linfeng_20120125_PCAF_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.19 0.00 0 7 25 2 627.80548 1254.60369 -2.94 22.34 2373 2373 MS2 22/26 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 304 3.19 0.00 0 3 99 2 665.32825 1329.64922 7.38 28.26 2518 2518 MS2 19/22 Linfeng_20120125_PCAF_6.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 140 3.18 0.00 0 8 25 2 599.27728 1197.54729 -1.86 16.74 1598 1598 MS2 20/28 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 143 3.18 0.00 0 16 25 2 599.27740 1197.54753 -1.66 16.97 1657 1657 MS2 22/28 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.18 0.00 0 33 100 2 738.40088 1475.79448 6.21 25.70 1871 1871 MS2 20/22 Linfeng_20120125_PCAF_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.17 0.00 0 2 64 2 665.32886 1329.65044 8.30 28.20 2274 2274 MS2 19/22 Linfeng_20120125_PCAF_9.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 151 3.17 0.00 0 2 25 3 1364.69287 4092.06406 -2.15 44.41 5273 5273 MS2 38/172 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 225 3.16 0.00 1 13 100 3 752.69257 2256.06314 8.06 42.25 5593 5593 MS2 27/72 Linfeng_20120125_PCAF_6.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 124 3.16 0.00 1 5 25 3 630.95630 1890.85434 -1.80 17.45 1698 1698 MS2 33/88 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 187 3.15 0.00 1 0 100 2 1128.53528 2256.06328 8.12 42.53 5473 5473 MS2 19/36 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.14 0.00 0 14 100 2 738.40173 1475.79619 7.36 25.64 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.14 0.00 0 2 33 2 597.31604 1193.62480 7.27 29.05 2471 2471 MS2 17/18 Linfeng_20120125_PCAF_4.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 122 3.13 0.00 0 15 100 2 1064.48608 2127.96489 7.01 45.57 6210 6210 MS2 17/34 Linfeng_20120125_PCAF_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.13 0.00 0 16 25 2 730.90247 1460.79766 -1.33 43.69 5151 5151 MS2 18/22 Linfeng_091311_rIgG_9.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 334 3.13 0.00 0 17 100 3 820.07758 2458.21817 8.27 41.51 5858 5858 MS2 24/96 Linfeng_20120125_PCAF_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 264 3.13 0.00 0 15 25 3 443.88336 1329.63553 -2.91 29.24 3295 3295 MS2 22/44 Linfeng_091311_rIgG_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 3.12 0.00 0 26 100 2 919.96741 1838.92754 7.08 43.74 6668 6668 MS2 21/42 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 239 3.11 0.00 0 15 25 2 627.80554 1254.60381 -2.84 22.28 2370 2370 MS2 21/26 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.11 0.00 0 50 100 2 738.40167 1475.79607 7.28 25.64 2077 2077 MS2 19/22 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.11 0.00 0 42 25 2 627.80945 1254.61162 3.39 21.45 1836 1836 MS2 19/26 Linfeng_122411_rIgG_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.11 0.00 0 12 25 2 627.80573 1254.60417 -2.55 22.58 2411 2411 MS2 22/26 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 3.11 0.00 1 2 79 2 807.43396 1613.86064 6.97 46.67 7098 7098 MS2 22/26 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 3.11 0.00 0 2 21 2 627.80505 1254.60283 -3.62 22.44 2475 2475 MS2 21/26 Linfeng_091311_rIgG_10.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 150 3.11 0.00 0 6 25 2 599.27734 1197.54741 -1.76 17.16 1667 1667 MS2 20/28 Linfeng_091311_rIgG_6.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 178 3.10 0.00 1 33 25 3 429.87396 1287.60733 -2.89 21.17 2218 2218 MS2 24/40 Linfeng_091311_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 3.10 0.00 0 28 25 3 580.90515 1740.70090 -2.72 17.51 1707 1707 MS2 25/76 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.09 0.00 0 22 100 2 738.40057 1475.79387 5.79 37.76 4979 4979 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.09 0.00 1 10 100 2 807.43414 1613.86101 7.19 45.67 6861 6861 MS2 21/26 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 3.08 0.00 1 35 100 3 464.56763 1391.68833 5.85 17.55 1122 1122 MS2 25/44 Linfeng_20120125_PCAF_1.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 64 3.08 0.00 0 44 25 2 794.84583 1588.68437 0.57 14.11 1226 1226 MS2 24/38 Linfeng_091311_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 71 3.07 0.00 0 16 25 2 660.79340 1320.57952 -2.57 21.95 2298 2298 MS2 23/30 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.07 0.00 1 11 25 3 652.67352 1956.00602 1.36 41.89 3905 3905 MS2 24/64 Linfeng_122411_rIgG_7.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 220 3.06 0.00 1 44 100 3 752.69147 2256.05985 6.60 42.06 4916 4916 MS2 25/72 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.06 0.00 0 3 100 2 597.31586 1193.62444 6.97 28.00 2293 2293 MS2 17/18 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.05 0.00 0 27 100 2 738.40045 1475.79363 5.63 29.88 3068 3068 MS2 20/22 Linfeng_20120125_PCAF_1.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 450 3.05 0.00 0 24 25 2 730.90173 1460.79619 -2.33 43.49 5118 5118 MS2 19/22 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 52 3.04 0.00 0 4 25 2 871.38086 1741.75444 3.38 17.44 1285 1285 MS2 21/44 Linfeng_122411_rIgG_7.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 3.04 0.00 1 3 25 2 668.85999 1336.71269 1.44 22.80 2017 2017 MS2 18/22 Linfeng_122411_rIgG_6.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 3.04 0.00 1 38 100 3 464.56717 1391.68695 4.87 17.69 1167 1167 MS2 22/44 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 387 3.04 0.00 0 20 100 2 738.40088 1475.79448 6.21 25.68 1879 1879 MS2 19/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 276 3.02 0.00 0 19 49 2 665.32751 1329.64775 6.28 27.42 2488 2488 MS2 19/22 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.02 0.00 0 12 100 2 919.96765 1838.92803 7.35 46.64 7092 7092 MS2 23/42 Linfeng_20120125_PCAF_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 3.02 0.00 0 18 25 2 686.36053 1371.71379 1.67 33.66 3245 3245 MS2 20/22 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 3.02 0.00 0 9 100 2 686.36353 1371.71977 6.03 40.96 5328 5328 MS2 19/22 Linfeng_20120125_PCAF_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 66 3.01 0.00 0 4 25 2 871.38245 1741.75762 5.20 17.40 1311 1311 MS2 18/44 Linfeng_122411_rIgG_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 132 3.01 0.00 0 46 100 2 660.80023 1320.59319 7.78 24.13 1780 1780 MS2 21/30 Linfeng_20120125_PCAF_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 59 3.01 0.00 0 6 100 2 871.38324 1741.75920 6.12 14.88 943 943 MS2 18/44 Linfeng_20120125_PCAF_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 265 3.00 0.00 0 24 25 3 443.88318 1329.63498 -3.32 29.21 3355 3355 MS2 24/44 Linfeng_091311_rIgG_8.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.00 0.00 0 48 25 2 730.90479 1460.80229 1.85 43.54 4522 4522 MS2 18/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 3.00 0.00 1 43 25 3 429.87381 1287.60688 -3.25 21.15 2244 2244 MS2 20/40 Linfeng_091311_rIgG_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 2.99 0.00 0 1 25 2 627.80536 1254.60344 -3.13 22.54 2374 2374 MS2 21/26 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw Medium TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 167 2.99 0.00 1 21 25 4 564.76660 2256.04458 -0.17 33.96 3311 3311 MS2 32/108 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.99 0.00 0 2 74 2 597.31580 1193.62432 6.86 28.19 2332 2332 MS2 17/18 Linfeng_20120125_PCAF_2.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 292 2.99 0.00 0 25 100 2 919.96796 1838.92864 7.68 45.63 6224 6224 MS2 22/42 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 308 2.98 0.00 0 35 100 2 919.96570 1838.92412 5.23 44.61 5680 5680 MS2 24/42 Linfeng_20120125_PCAF_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 252 2.97 0.00 0 40 25 2 665.32501 1329.64275 2.52 25.13 2081 2081 MS2 18/22 Linfeng_122411_rIgG_8.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 463 2.97 0.00 0 6 100 2 686.36462 1371.72197 7.63 41.04 4812 4812 MS2 19/22 Linfeng_20120125_PCAF_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 284 2.97 0.00 0 66 100 2 665.32751 1329.64775 6.28 30.18 3143 3143 MS2 17/22 Linfeng_20120125_PCAF_1.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 136 2.97 0.00 0 29 25 2 599.27777 1197.54827 -1.05 17.04 1707 1707 MS2 18/28 Linfeng_091311_rIgG_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.96 0.00 0 5 25 2 597.31165 1193.61601 -0.09 27.61 2655 2655 MS2 17/18 Linfeng_122411_rIgG_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 67 2.96 0.00 0 6 100 2 871.38373 1741.76018 6.68 14.83 1065 1065 MS2 22/44 Linfeng_20120125_PCAF_5.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 2.96 0.00 0 42 25 2 627.80902 1254.61077 2.71 21.44 1575 1575 MS2 19/26 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.95 0.00 0 2 17 2 597.31525 1193.62322 5.94 28.83 2436 2436 MS2 17/18 Linfeng_20120125_PCAF_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 302 2.95 0.00 0 26 100 2 919.96631 1838.92534 5.89 44.94 5965 5965 MS2 20/42 Linfeng_20120125_PCAF_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 119 2.95 0.00 0 21 100 2 660.80035 1320.59343 7.97 23.30 1648 1648 MS2 19/30 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.95 0.00 0 4 6 2 597.31128 1193.61528 -0.70 4.33 475 475 MS2 17/18 Linfeng_122411_rIgG_10.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 123 2.95 0.00 0 18 100 2 660.80023 1320.59319 7.78 23.44 1669 1669 MS2 23/30 Linfeng_20120125_PCAF_1.raw Medium SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.95 0.00 2 21 25 5 514.06244 2566.28309 1.80 29.48 2904 2904 MS2 35/168 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 63 2.94 0.00 0 36 25 3 581.25635 1741.75449 3.41 17.51 1413 1413 MS2 33/88 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.94 0.00 0 13 100 2 597.31561 1193.62395 6.56 27.92 2181 2181 MS2 16/18 Linfeng_20120125_PCAF_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 281 2.94 0.00 0 54 25 2 919.95911 1838.91094 -1.94 38.50 4528 4528 MS2 19/42 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.94 0.00 0 42 100 3 613.64606 1838.92362 4.95 44.59 6604 6604 MS2 33/84 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 416 2.94 0.00 0 3 24 2 597.31592 1193.62456 7.07 28.61 2401 2401 MS2 17/18 Linfeng_20120125_PCAF_4.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 122 2.94 0.00 0 48 100 2 1064.48608 2127.96489 7.01 45.89 5977 5977 MS2 16/34 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.93 0.00 0 5 70 2 597.31555 1193.62383 6.46 28.99 2947 2947 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.92 0.00 0 3 29 2 597.31622 1193.62517 7.58 28.51 2381 2381 MS2 17/18 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.92 0.00 0 26 100 2 738.40045 1475.79363 5.63 29.96 3089 3089 MS2 17/22 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.92 0.00 0 2 72 2 597.31592 1193.62456 7.07 28.85 2387 2387 MS2 17/18 Linfeng_20120125_PCAF_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 2.91 0.00 0 22 100 2 919.96680 1838.92632 6.42 44.81 5933 5933 MS2 21/42 Linfeng_20120125_PCAF_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 21 2.91 0.00 0 3 100 2 870.86176 1740.71623 6.09 14.04 927 927 MS2 22/38 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.91 0.00 0 2 100 2 597.31549 1193.62370 6.35 27.91 2271 2271 MS2 17/18 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 251 2.90 0.00 0 0 100 2 627.81104 1254.61479 5.92 20.73 1351 1351 MS2 19/26 Linfeng_20120125_PCAF_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.90 0.00 0 1 79 2 597.31561 1193.62395 6.56 28.00 2288 2288 MS2 17/18 Linfeng_20120125_PCAF_4.raw Medium SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.90 0.00 2 12 25 5 514.06232 2566.28248 1.57 29.39 2691 2691 MS2 41/168 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 418 2.90 0.00 0 1 100 2 597.31549 1193.62370 6.35 27.86 2262 2262 MS2 17/18 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 2.90 0.00 0 3 63 2 597.31598 1193.62468 7.17 28.95 2339 2339 MS2 17/18 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 2.90 0.00 0 3 46 2 597.31604 1193.62480 7.27 28.64 2243 2243 MS2 17/18 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.89 0.00 0 9 68 2 597.31519 1193.62309 5.84 30.55 3231 3231 MS2 17/18 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.89 0.00 0 2 42 2 597.31561 1193.62395 6.56 28.25 2335 2335 MS2 17/18 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.89 0.00 0 2 47 2 597.31573 1193.62419 6.76 28.42 2370 2370 MS2 17/18 Linfeng_20120125_PCAF_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 148 2.89 0.00 1 10 25 3 752.68445 2256.03879 -2.73 34.96 4048 4048 MS2 24/72 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.89 0.00 0 2 54 2 597.31567 1193.62407 6.66 28.35 2534 2534 MS2 17/18 Linfeng_20120125_PCAF_6.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 460 2.89 0.00 0 10 100 2 686.36456 1371.72185 7.54 43.55 5910 5910 MS2 18/22 Linfeng_20120125_PCAF_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 404 2.89 0.00 0 3 26 2 597.31616 1193.62505 7.48 28.56 2391 2391 MS2 17/18 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.89 0.00 1 4 100 3 655.66504 1964.98056 1.03 43.33 6294 6294 MS2 21/68 Linfeng_20120125_PCAF_1.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 2.88 0.00 1 74 25 3 464.56271 1391.67359 -4.74 17.98 1807 1807 MS2 24/44 Linfeng_091311_rIgG_8.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 2.88 0.00 0 12 25 2 627.80530 1254.60332 -3.23 22.59 2452 2452 MS2 21/26 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 198 2.88 0.00 0 0 100 2 599.28204 1197.55681 6.09 13.46 844 844 MS2 19/28 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 2.88 0.00 0 6 8 2 597.31000 1193.61272 -2.85 29.07 3035 3035 MS2 17/18 Linfeng_091311_rIgG_1.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.88 0.00 0 3 44 2 597.31537 1193.62346 6.15 28.87 2922 2922 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.87 0.00 0 4 4 2 597.31525 1193.62322 5.94 28.48 2737 2737 MS2 17/18 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 300 2.87 0.00 0 41 100 2 919.96533 1838.92339 4.83 43.79 6642 6642 MS2 22/42 Linfeng_20120125_PCAF_8.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 305 2.87 0.00 0 7 2 2 519.26630 1037.52532 -0.89 4.33 474 474 MS2 16/16 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.87 0.00 0 4 42 2 597.31567 1193.62407 6.66 28.08 2736 2736 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.86 0.00 0 4 70 2 597.31555 1193.62383 6.46 28.04 2297 2297 MS2 17/18 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 302 2.86 0.00 0 32 100 2 919.96661 1838.92595 6.22 46.77 6204 6204 MS2 21/42 Linfeng_20120125_PCAF_7.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.86 0.00 1 32 100 2 807.43378 1613.86028 6.74 46.06 6524 6524 MS2 20/26 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 373 2.86 0.00 0 27 25 2 597.31323 1193.61919 2.57 27.75 1983 1983 MS2 16/18 Linfeng_122411_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 2.85 0.00 1 29 100 3 538.62518 1613.86100 7.18 46.02 6945 6945 MS2 28/52 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 290 2.85 0.00 0 37 100 2 919.96710 1838.92693 6.75 46.18 6062 6062 MS2 24/42 Linfeng_20120125_PCAF_7.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 117 2.85 0.00 0 48 25 3 440.86716 1320.58692 3.03 20.77 1752 1752 MS2 28/60 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.85 0.00 0 3 35 2 597.31580 1193.62432 6.86 28.20 2764 2764 MS2 17/18 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 423 2.85 0.00 0 2 100 2 597.31616 1193.62505 7.48 28.08 2152 2152 MS2 17/18 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 385 2.85 0.00 1 3 25 4 492.00146 1964.98403 2.79 32.91 3179 3179 MS2 38/102 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.85 0.00 0 2 63 2 597.31610 1193.62493 7.38 28.66 2607 2607 MS2 17/18 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 2.84 0.00 0 15 100 2 738.40125 1475.79521 6.70 25.68 1807 1807 MS2 19/22 Linfeng_20120125_PCAF_9.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 374 2.84 0.00 0 16 25 2 686.35699 1371.70671 -3.49 34.77 4168 4168 MS2 19/22 Linfeng_091311_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 418 2.84 0.00 0 7 100 2 597.31604 1193.62480 7.27 29.26 2680 2680 MS2 17/18 Linfeng_20120125_PCAF_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.84 0.00 0 15 25 2 519.26770 1037.52812 1.81 26.04 2391 2391 MS2 15/16 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 2.84 0.00 0 4 44 2 597.31635 1193.62541 7.79 28.86 2281 2281 MS2 17/18 Linfeng_20120125_PCAF_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.84 0.00 1 49 100 3 464.56763 1391.68833 5.85 17.85 1135 1135 MS2 22/44 Linfeng_20120125_PCAF_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.84 0.00 1 50 100 3 464.56769 1391.68851 5.99 17.36 1272 1272 MS2 22/44 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.84 0.00 0 3 49 2 597.31567 1193.62407 6.66 27.99 2717 2717 MS2 17/18 Linfeng_20120125_PCAF_5.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.83 0.00 1 0 25 2 696.34241 1391.67754 -1.90 17.80 1737 1737 MS2 18/22 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 2.83 0.00 0 2 35 2 597.31592 1193.62456 7.07 28.60 2577 2577 MS2 17/18 Linfeng_20120125_PCAF_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 136 2.83 0.00 0 8 100 2 660.79932 1320.59136 6.39 23.66 1635 1635 MS2 15/30 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 2.83 0.00 0 33 25 2 604.81256 1208.61785 1.69 27.44 2461 2461 MS2 16/20 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 386 2.82 0.00 0 9 25 2 597.31311 1193.61894 2.36 26.87 2501 2501 MS2 17/18 Linfeng_122411_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 275 2.82 0.00 0 11 5 2 519.26556 1037.52385 -2.30 28.38 3208 3208 MS2 15/16 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 416 2.82 0.00 0 3 42 2 597.31592 1193.62456 7.07 28.80 2271 2271 MS2 17/18 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.82 0.00 0 3 27 2 597.31537 1193.62346 6.15 28.69 2879 2879 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 2.82 0.00 0 26 25 2 519.26526 1037.52324 -2.89 28.60 3209 3209 MS2 15/16 Linfeng_091311_rIgG_9.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.82 0.00 0 8 84 2 686.36163 1371.71599 3.27 40.58 5848 5848 MS2 19/22 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.82 0.00 0 2 45 2 597.31580 1193.62432 6.86 28.39 2543 2543 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 369 2.82 0.00 0 9 23 2 597.31042 1193.61357 -2.13 28.83 3277 3277 MS2 17/18 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 2.82 0.00 0 3 37 2 597.31580 1193.62432 6.86 28.12 2746 2746 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.82 0.00 0 1 63 2 597.31604 1193.62480 7.27 28.48 2218 2218 MS2 17/18 Linfeng_20120125_PCAF_3.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 2.82 0.00 1 24 100 3 752.69244 2256.06278 7.90 42.18 5390 5390 MS2 22/72 Linfeng_20120125_PCAF_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 273 2.82 0.00 0 19 42 2 665.32776 1329.64824 6.65 28.66 2780 2780 MS2 19/22 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 435 2.82 0.00 0 4 100 2 597.31567 1193.62407 6.66 29.07 2967 2967 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.81 0.00 0 14 25 2 597.31030 1193.61333 -2.34 29.19 3306 3306 MS2 17/18 Linfeng_091311_rIgG_6.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.81 0.00 2 9 100 3 856.10449 2566.29892 7.97 41.75 5475 5475 MS2 32/84 Linfeng_20120125_PCAF_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 423 2.81 0.00 0 3 36 2 597.31580 1193.62432 6.86 28.55 2568 2568 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 347 2.81 0.00 0 9 25 2 597.31042 1193.61357 -2.13 28.87 3275 3275 MS2 17/18 Linfeng_091311_rIgG_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.81 0.00 1 16 100 2 807.43378 1613.86028 6.74 46.49 6135 6135 MS2 19/26 Linfeng_20120125_PCAF_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 2.80 0.00 0 7 8 2 519.26715 1037.52703 0.76 27.11 2590 2590 MS2 15/16 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 2.80 0.00 0 34 100 2 738.40155 1475.79582 7.12 38.10 4356 4356 MS2 17/22 Linfeng_20120125_PCAF_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 264 2.80 0.00 0 14 22 2 665.32764 1329.64800 6.46 27.61 2533 2533 MS2 19/22 Linfeng_20120125_PCAF_1.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.80 0.00 0 31 25 2 519.26727 1037.52727 0.99 24.64 2303 2303 MS2 15/16 Linfeng_122411_rIgG_5.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 387 2.80 0.00 1 42 100 3 464.56757 1391.68814 5.72 18.15 1362 1362 MS2 21/44 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 2.80 0.00 1 46 100 3 464.56741 1391.68769 5.39 17.26 1261 1261 MS2 22/44 Linfeng_20120125_PCAF_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 288 2.80 0.00 0 13 100 2 919.96777 1838.92827 7.48 46.90 6235 6235 MS2 22/42 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.80 0.00 0 1 100 2 597.31494 1193.62261 5.43 27.64 2408 2408 MS2 17/18 Linfeng_20120125_PCAF_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 284 2.80 0.00 0 25 100 2 665.32770 1329.64812 6.56 27.07 1974 1974 MS2 18/22 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.80 0.00 0 2 90 2 597.31592 1193.62456 7.07 28.11 2316 2316 MS2 17/18 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 439 2.79 0.00 0 3 100 2 597.31543 1193.62358 6.25 27.71 2424 2424 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 2.79 0.00 0 2 37 2 597.31628 1193.62529 7.68 28.53 2850 2850 MS2 17/18 Linfeng_20120125_PCAF_8.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.79 0.00 0 24 25 2 519.26501 1037.52275 -3.36 28.58 3204 3204 MS2 15/16 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 2.79 0.00 0 8 100 2 597.31573 1193.62419 6.76 29.43 2540 2540 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.78 0.00 0 3 25 2 604.81311 1208.61894 2.60 23.41 1804 1804 MS2 16/20 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.78 0.00 0 44 100 2 686.36499 1371.72270 8.17 42.00 5561 5561 MS2 18/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 2.78 0.00 0 24 100 2 738.40173 1475.79619 7.36 38.09 4445 4445 MS2 17/22 Linfeng_20120125_PCAF_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 429 2.78 0.00 0 1 100 2 597.31531 1193.62334 6.05 27.83 2255 2255 MS2 17/18 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 2.78 0.00 0 7 46 2 597.31537 1193.62346 6.15 29.53 2984 2984 MS2 16/18 Linfeng_20120125_PCAF_1.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 369 2.77 0.00 1 37 100 2 807.43451 1613.86174 7.65 46.12 6032 6032 MS2 19/26 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.77 0.00 0 11 25 2 597.31018 1193.61308 -2.54 29.22 3293 3293 MS2 17/18 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.77 0.00 0 21 25 2 597.31311 1193.61894 2.36 26.35 2288 2288 MS2 17/18 Linfeng_122411_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.77 0.00 0 13 25 2 519.26801 1037.52873 2.40 25.27 2145 2145 MS2 16/16 Linfeng_122411_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.77 0.00 0 1 100 2 597.31573 1193.62419 6.76 27.57 2396 2396 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.77 0.00 1 12 25 2 668.85773 1336.70818 -1.94 25.09 2758 2758 MS2 17/22 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 68 2.76 0.00 0 4 25 2 794.84546 1588.68364 0.11 14.53 1270 1270 MS2 19/38 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 277 2.76 0.00 0 6 5 2 519.26550 1037.52373 -2.42 28.36 3211 3211 MS2 15/16 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 258 2.76 0.00 0 13 100 2 665.32776 1329.64824 6.65 27.26 2338 2338 MS2 19/22 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 393 2.76 0.00 0 8 100 2 597.31641 1193.62554 7.89 27.74 2197 2197 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 275 2.76 0.00 0 10 2 2 519.26501 1037.52275 -3.36 28.48 2956 2956 MS2 16/16 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.75 0.00 0 3 100 2 597.31512 1193.62297 5.74 29.22 2378 2378 MS2 17/18 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.75 0.00 1 6 25 2 668.85730 1336.70732 -2.58 24.99 2786 2786 MS2 19/22 Linfeng_091311_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 2.75 0.00 1 51 100 3 752.69183 2256.06095 7.09 42.23 4948 4948 MS2 24/72 Linfeng_20120125_PCAF_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 2.75 0.00 0 29 100 2 665.32739 1329.64751 6.10 28.91 2450 2450 MS2 18/22 Linfeng_20120125_PCAF_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 151 2.75 0.00 0 23 25 2 599.27679 1197.54631 -2.68 17.15 1688 1688 MS2 19/28 Linfeng_091311_rIgG_8.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 2.75 0.00 0 8 25 2 730.90540 1460.80351 2.69 43.65 4692 4692 MS2 16/22 Linfeng_122411_rIgG_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 2.74 0.00 1 20 100 3 752.69153 2256.06003 6.68 42.42 5365 5365 MS2 19/72 Linfeng_20120125_PCAF_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 310 2.74 0.00 0 24 100 2 665.32831 1329.64934 7.47 28.88 2284 2284 MS2 18/22 Linfeng_20120125_PCAF_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 280 2.74 0.00 0 24 7 2 519.26501 1037.52275 -3.36 28.31 3242 3242 MS2 15/16 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.74 0.00 0 6 92 2 597.31525 1193.62322 5.94 29.29 2684 2684 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.74 0.00 0 3 69 2 597.31586 1193.62444 6.97 29.14 2662 2662 MS2 17/18 Linfeng_20120125_PCAF_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.73 0.00 0 17 100 2 665.32697 1329.64665 5.45 26.87 2063 2063 MS2 19/22 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 217 2.73 0.00 0 11 25 2 627.80493 1254.60259 -3.81 22.70 2169 2169 MS2 20/26 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.73 0.00 0 6 100 2 597.31616 1193.62505 7.48 28.35 2250 2250 MS2 17/18 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 416 2.73 0.00 0 4 68 2 597.31531 1193.62334 6.05 29.20 2670 2670 MS2 17/18 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.72 0.00 1 6 2 2 668.85938 1336.71147 0.53 3.67 375 375 MS2 18/22 Linfeng_122411_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 220 2.72 0.00 1 19 29 3 752.69147 2256.05985 6.60 41.30 6034 6034 MS2 21/72 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 407 2.72 0.00 0 4 100 2 597.31616 1193.62505 7.48 28.05 2252 2252 MS2 17/18 Linfeng_20120125_PCAF_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.71 0.00 0 19 100 2 597.31537 1193.62346 6.15 27.75 2149 2149 MS2 17/18 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 453 2.71 0.00 0 72 100 2 686.36432 1371.72136 7.19 42.65 6129 6129 MS2 18/22 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.71 0.00 0 14 100 2 686.36444 1371.72161 7.37 43.49 5898 5898 MS2 19/22 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.71 0.00 0 4 100 2 597.31580 1193.62432 6.86 29.30 2392 2392 MS2 17/18 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 433 2.71 0.00 0 6 100 2 597.31567 1193.62407 6.66 27.54 2198 2198 MS2 17/18 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 274 2.70 0.00 0 21 100 2 665.32617 1329.64507 4.26 26.89 2457 2457 MS2 19/22 Linfeng_20120125_PCAF_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 445 2.70 0.00 0 34 100 2 686.36401 1371.72075 6.74 40.85 4677 4677 MS2 18/22 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.70 0.00 0 19 25 2 597.31281 1193.61833 1.85 26.19 2294 2294 MS2 16/18 Linfeng_122411_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 277 2.69 0.00 0 28 25 2 519.26520 1037.52312 -3.01 28.52 3216 3216 MS2 15/16 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 2.69 0.00 1 14 100 2 807.43317 1613.85906 5.98 43.39 6580 6580 MS2 22/26 Linfeng_20120125_PCAF_5.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 2.69 0.00 0 63 25 2 519.26544 1037.52361 -2.54 28.51 3163 3163 MS2 15/16 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.69 0.00 0 5 100 2 597.31549 1193.62370 6.35 27.45 2496 2496 MS2 17/18 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 2.69 0.00 0 4 100 2 597.31622 1193.62517 7.58 28.10 2261 2261 MS2 17/18 Linfeng_20120125_PCAF_9.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.69 0.00 1 35 100 3 464.56790 1391.68915 6.45 18.00 1350 1350 MS2 21/44 Linfeng_20120125_PCAF_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 297 2.68 0.00 0 11 17 2 519.26489 1037.52251 -3.60 28.56 3267 3267 MS2 15/16 Linfeng_091311_rIgG_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 2.68 0.00 0 45 25 2 597.31049 1193.61370 -2.03 58.44 6791 6791 MS2 15/18 Linfeng_091311_rIgG_4.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 332 2.68 0.00 0 37 100 3 820.07581 2458.21286 6.11 40.56 5635 5635 MS2 23/96 Linfeng_20120125_PCAF_1.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 278 2.68 0.00 0 20 25 2 519.26672 1037.52617 -0.07 4.32 449 449 MS2 15/16 Linfeng_122411_rIgG_9.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.68 0.00 0 36 100 2 686.36316 1371.71904 5.50 42.74 5729 5729 MS2 18/22 Linfeng_20120125_PCAF_10.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 235 2.68 0.00 0 4 100 2 627.81073 1254.61418 5.43 20.70 1456 1456 MS2 17/26 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 436 2.67 0.00 0 1 100 2 597.31573 1193.62419 6.76 27.70 2237 2237 MS2 17/18 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.67 0.00 0 35 25 2 597.30988 1193.61247 -3.06 28.83 3314 3314 MS2 17/18 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.67 0.00 0 7 100 2 597.31580 1193.62432 6.86 29.19 2995 2995 MS2 17/18 Linfeng_20120125_PCAF_5.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 215 2.67 0.00 0 14 25 2 390.19312 779.37895 -0.74 14.33 1246 1246 MS2 15/16 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.67 0.00 0 6 100 2 597.31476 1193.62224 5.13 27.48 2602 2602 MS2 17/18 Linfeng_20120125_PCAF_5.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 2.67 0.00 0 24 25 2 519.26379 1037.52031 -5.72 26.05 2889 2889 MS2 14/16 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 272 2.67 0.00 0 30 100 2 919.96851 1838.92974 8.28 46.21 6052 6052 MS2 22/42 Linfeng_20120125_PCAF_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.67 0.00 0 19 100 2 554.27832 1107.54936 5.79 19.57 1382 1382 MS2 15/16 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 385 2.67 0.00 0 1 100 2 597.31482 1193.62236 5.23 27.65 2216 2216 MS2 17/18 Linfeng_20120125_PCAF_4.raw Medium SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 310 2.66 0.00 2 25 25 4 642.32397 2566.27407 -1.71 30.31 3456 3456 MS2 39/126 Linfeng_091311_rIgG_6.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 160 2.66 0.00 0 11 25 2 599.27826 1197.54924 -0.23 17.04 1592 1592 MS2 19/28 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.66 0.00 0 11 25 2 597.31006 1193.61284 -2.75 29.22 3292 3292 MS2 17/18 Linfeng_091311_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 7 100 2 554.27863 1107.54997 6.34 17.67 1327 1327 MS2 14/16 Linfeng_20120125_PCAF_6.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.66 0.00 0 6 5 2 566.25781 1131.50835 -1.40 3.88 408 408 MS2 16/18 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.66 0.00 1 5 25 4 491.99875 1964.97317 -2.74 33.96 3930 3930 MS2 35/102 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 405 2.66 0.00 0 11 100 2 597.31598 1193.62468 7.17 30.88 2984 2984 MS2 17/18 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 2.65 0.00 0 19 100 2 686.36450 1371.72173 7.45 43.26 5848 5848 MS2 19/22 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.65 0.00 0 28 25 2 597.31250 1193.61772 1.34 27.77 2340 2340 MS2 16/18 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 436 2.65 0.00 0 4 74 2 597.31592 1193.62456 7.07 29.17 2666 2666 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.65 0.00 0 10 25 2 604.81317 1208.61907 2.70 27.66 2605 2605 MS2 15/20 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 425 2.64 0.00 0 12 100 2 597.31580 1193.62432 6.86 29.60 2400 2400 MS2 17/18 Linfeng_20120125_PCAF_3.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 142 2.64 0.00 1 21 25 3 752.68408 2256.03769 -3.22 34.79 3993 3993 MS2 26/72 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 289 2.64 0.00 0 14 100 2 730.90942 1460.81157 8.20 10.88 741 741 MS2 14/22 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.64 0.00 0 26 100 2 686.36395 1371.72063 6.65 40.75 5056 5056 MS2 18/22 Linfeng_20120125_PCAF_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 161 2.64 0.00 0 18 25 2 599.27838 1197.54949 -0.03 17.18 1614 1614 MS2 21/28 Linfeng_091311_rIgG_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.64 0.00 0 11 100 2 730.90826 1460.80925 6.61 1.38 115 115 MS2 17/22 Linfeng_20120125_PCAF_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 270 2.64 0.00 0 19 100 2 665.32776 1329.64824 6.65 28.03 2197 2197 MS2 19/22 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 358 2.64 0.00 0 4 11 2 604.80951 1208.61174 -3.36 29.64 3112 3112 MS2 15/20 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.63 0.00 1 28 23 3 652.67242 1956.00272 -0.33 41.61 4629 4629 MS2 22/64 Linfeng_122411_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.63 0.00 0 7 100 2 597.31519 1193.62309 5.84 28.23 2230 2230 MS2 16/18 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 429 2.63 0.00 0 17 100 2 597.31549 1193.62370 6.35 30.85 2780 2780 MS2 17/18 Linfeng_20120125_PCAF_2.raw Medium TSQNSELNNMQDLVEDYKKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 246 2.62 0.00 2 10 25 4 596.79156 2384.14443 1.89 32.12 3079 3079 MS2 33/114 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.62 0.00 0 13 100 2 597.31592 1193.62456 7.07 27.81 2160 2160 MS2 16/18 Linfeng_20120125_PCAF_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.62 0.00 0 18 22 2 604.80927 1208.61125 -3.76 29.50 3404 3404 MS2 15/20 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 2.62 0.00 0 32 100 2 597.31628 1193.62529 7.68 33.50 3613 3613 MS2 16/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.62 0.00 0 26 100 2 597.31519 1193.62309 5.84 27.66 2412 2412 MS2 16/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 2.61 0.00 0 32 25 2 597.31024 1193.61321 -2.44 29.86 3453 3453 MS2 17/18 Linfeng_091311_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 308 2.61 0.00 0 43 100 2 919.96808 1838.92888 7.81 46.83 6512 6512 MS2 22/42 Linfeng_20120125_PCAF_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 220 2.61 0.00 1 28 100 3 752.69238 2256.06260 7.82 47.69 6909 6909 MS2 22/72 Linfeng_20120125_PCAF_10.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.61 0.00 1 13 25 4 491.99908 1964.97451 -2.05 33.73 3968 3968 MS2 34/102 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.61 0.00 0 8 5 2 566.25836 1131.50945 -0.43 3.73 385 385 MS2 15/18 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 304 2.61 0.00 0 10 100 2 665.32843 1329.64958 7.66 28.96 2653 2653 MS2 18/22 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.61 0.00 0 22 100 2 597.31555 1193.62383 6.46 29.90 2613 2613 MS2 17/18 Linfeng_20120125_PCAF_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.61 0.00 1 40 100 2 807.43329 1613.85930 6.13 46.00 5825 5825 MS2 20/26 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.61 0.00 0 16 100 2 686.36359 1371.71990 6.12 40.92 5010 5010 MS2 18/22 Linfeng_20120125_PCAF_9.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 690 2.61 0.00 0 33 25 2 487.26700 973.52672 -4.74 27.81 3174 3174 MS2 12/14 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 298 2.60 0.00 0 47 100 2 919.96698 1838.92668 6.62 44.27 5586 5586 MS2 19/42 Linfeng_20120125_PCAF_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 369 2.59 0.00 1 18 100 2 807.43396 1613.86064 6.97 47.01 6054 6054 MS2 19/26 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.59 0.00 0 9 25 2 604.81335 1208.61943 3.00 22.40 1704 1704 MS2 15/20 Linfeng_122411_rIgG_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 314 2.59 0.00 0 46 100 2 919.96680 1838.92632 6.42 44.66 5990 5990 MS2 22/42 Linfeng_20120125_PCAF_4.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.59 0.00 0 4 2 2 566.25775 1131.50823 -1.51 4.07 457 457 MS2 16/18 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.59 0.00 0 25 100 2 597.31622 1193.62517 7.58 27.67 2139 2139 MS2 16/18 Linfeng_20120125_PCAF_7.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.59 0.00 0 5 100 2 597.31555 1193.62383 6.46 27.51 2386 2386 MS2 17/18 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 2.58 0.00 0 33 100 2 665.32806 1329.64885 7.11 27.19 2103 2103 MS2 19/22 Linfeng_20120125_PCAF_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.58 0.00 0 31 25 2 597.31311 1193.61894 2.36 27.29 2441 2441 MS2 17/18 Linfeng_122411_rIgG_2.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 2.58 0.00 1 7 25 4 492.00113 1964.98269 2.11 33.00 3161 3161 MS2 34/102 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 366 2.58 0.00 1 31 100 2 807.43463 1613.86199 7.80 46.22 6367 6367 MS2 20/26 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 2.58 0.00 0 18 25 2 604.81372 1208.62016 3.61 22.68 1689 1689 MS2 14/20 Linfeng_122411_rIgG_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 120 2.58 0.00 0 10 100 2 660.79950 1320.59172 6.67 23.65 1782 1782 MS2 16/30 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 2.57 0.00 0 13 25 2 604.81000 1208.61272 -2.55 29.80 3370 3370 MS2 15/20 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.57 0.00 0 17 100 2 597.31549 1193.62370 6.35 30.90 2789 2789 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 445 2.57 0.00 0 15 100 2 686.36383 1371.72038 6.48 40.89 4784 4784 MS2 18/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 0 50 100 2 738.40088 1475.79448 6.21 38.78 5220 5220 MS2 15/22 Linfeng_20120125_PCAF_1.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 257 2.57 0.00 0 0 15 3 1016.83850 3048.50095 2.16 48.54 6924 6924 MS2 22/104 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 423 2.57 0.00 0 22 100 2 597.31573 1193.62419 6.76 30.95 2797 2797 MS2 17/18 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.57 0.00 0 8 25 2 604.80975 1208.61223 -2.95 29.78 3384 3384 MS2 15/20 Linfeng_091311_rIgG_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.56 0.00 0 31 100 2 519.26923 1037.53118 4.76 26.47 2256 2256 MS2 15/16 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 2.56 0.00 0 14 100 2 597.31573 1193.62419 6.76 30.95 2997 2997 MS2 16/18 Linfeng_20120125_PCAF_6.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 358 2.56 0.00 0 7 100 2 730.90790 1460.80852 6.11 2.30 271 271 MS2 15/22 Linfeng_20120125_PCAF_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 433 2.56 0.00 0 22 100 2 597.31525 1193.62322 5.94 29.95 2620 2620 MS2 16/18 Linfeng_20120125_PCAF_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 280 2.55 0.00 0 18 25 2 519.26550 1037.52373 -2.42 28.47 3322 3322 MS2 15/16 Linfeng_091311_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.55 0.00 0 21 100 2 597.31573 1193.62419 6.76 30.98 2803 2803 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.54 0.00 0 6 16 2 604.81012 1208.61296 -2.35 29.54 3365 3365 MS2 15/20 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.54 0.00 0 15 25 2 604.81299 1208.61870 2.40 27.51 2443 2443 MS2 15/20 Linfeng_122411_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 83 2.54 0.00 0 23 25 2 660.79358 1320.57988 -2.29 21.74 2378 2378 MS2 18/30 Linfeng_091311_rIgG_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 280 2.54 0.00 0 24 100 2 919.96674 1838.92620 6.35 47.05 6763 6763 MS2 21/42 Linfeng_20120125_PCAF_6.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.53 0.00 0 22 100 2 597.31580 1193.62432 6.86 30.14 2839 2839 MS2 17/18 Linfeng_20120125_PCAF_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 436 2.53 0.00 0 12 100 2 597.31592 1193.62456 7.07 29.41 2706 2706 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 407 2.53 0.00 0 7 100 2 597.31616 1193.62505 7.48 32.83 3452 3452 MS2 17/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 421 2.53 0.00 0 14 100 2 597.31549 1193.62370 6.35 29.89 2444 2444 MS2 17/18 Linfeng_20120125_PCAF_3.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 198 2.52 0.00 1 24 25 3 715.73370 2145.18656 2.94 41.11 4373 4373 MS2 28/68 Linfeng_122411_rIgG_6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 84 2.52 0.00 0 23 10 2 660.79565 1320.58403 0.85 3.28 332 332 MS2 20/30 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 404 2.52 0.00 0 20 100 2 597.31573 1193.62419 6.76 30.27 2655 2655 MS2 17/18 Linfeng_20120125_PCAF_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 418 2.51 0.00 0 18 100 2 597.31555 1193.62383 6.46 29.67 2765 2765 MS2 17/18 Linfeng_20120125_PCAF_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.51 0.00 0 11 100 2 686.36456 1371.72185 7.54 41.87 4880 4880 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 337 2.51 0.00 1 27 25 2 696.34296 1391.67864 -1.11 18.06 1759 1759 MS2 16/22 Linfeng_091311_rIgG_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 2.51 0.00 0 39 100 2 919.96692 1838.92656 6.55 46.68 5976 5976 MS2 19/42 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 435 2.51 0.00 0 9 100 2 597.31592 1193.62456 7.07 29.51 3067 3067 MS2 17/18 Linfeng_20120125_PCAF_5.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 2.51 0.00 1 33 100 3 538.62494 1613.86026 6.73 45.92 6922 6922 MS2 24/52 Linfeng_20120125_PCAF_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 143 2.51 0.00 0 60 100 2 660.79901 1320.59075 5.93 24.54 1849 1849 MS2 19/30 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.50 0.00 1 6 25 4 491.99893 1964.97390 -2.36 33.83 3929 3929 MS2 34/102 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.50 0.00 0 27 100 2 597.31628 1193.62529 7.68 30.27 2507 2507 MS2 16/18 Linfeng_20120125_PCAF_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 353 2.50 0.00 1 29 100 2 807.43274 1613.85820 5.45 46.91 6415 6415 MS2 21/26 Linfeng_20120125_PCAF_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.50 0.00 0 18 100 2 730.90857 1460.80986 7.03 1.27 100 100 MS2 17/22 Linfeng_20120125_PCAF_2.raw Medium TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 2.50 0.00 1 13 100 3 752.69250 2256.06296 7.98 42.03 5540 5540 MS2 22/72 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 2.50 0.00 0 11 100 2 597.31604 1193.62480 7.27 29.57 2730 2730 MS2 17/18 Linfeng_20120125_PCAF_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 2.49 0.00 0 5 100 2 627.81146 1254.61565 6.60 20.55 1458 1458 MS2 17/26 Linfeng_20120125_PCAF_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 393 2.49 0.00 0 34 100 2 597.31635 1193.62541 7.79 30.46 2692 2692 MS2 15/18 Linfeng_20120125_PCAF_9.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 2.49 0.00 0 5 25 2 566.25616 1131.50505 -4.32 24.80 2691 2691 MS2 16/18 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 2.49 0.00 0 28 100 2 519.26923 1037.53118 4.76 26.36 2229 2229 MS2 14/16 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.48 0.00 0 35 25 2 597.31360 1193.61992 3.18 27.75 2157 2157 MS2 16/18 Linfeng_122411_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 407 2.48 0.00 0 28 100 2 597.31500 1193.62273 5.54 27.62 2403 2403 MS2 17/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.48 0.00 0 51 100 2 597.31665 1193.62602 8.30 30.45 2540 2540 MS2 15/18 Linfeng_20120125_PCAF_3.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 83 2.48 0.00 0 18 25 2 566.25739 1131.50749 -2.16 24.77 2657 2657 MS2 16/18 Linfeng_091311_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 2.48 0.00 0 6 24 2 604.81018 1208.61308 -2.25 29.50 3367 3367 MS2 15/20 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.48 0.00 0 15 100 2 597.31567 1193.62407 6.66 29.80 2433 2433 MS2 16/18 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.48 0.00 0 35 100 2 597.31610 1193.62493 7.38 31.17 2836 2836 MS2 16/18 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 390 2.48 0.00 0 15 100 2 597.31647 1193.62566 7.99 33.13 3525 3525 MS2 16/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 318 2.48 0.00 0 30 25 2 597.31122 1193.61516 -0.81 57.93 6876 6876 MS2 14/18 Linfeng_091311_rIgG_2.raw Medium YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 387 2.48 0.00 0 22 25 3 398.54449 1193.61893 2.35 26.45 2302 2302 MS2 17/36 Linfeng_122411_rIgG_3.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 2.48 0.00 0 26 25 2 566.25653 1131.50578 -3.67 24.50 2682 2682 MS2 16/18 Linfeng_091311_rIgG_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 232 2.47 0.00 0 9 100 2 627.81055 1254.61382 5.14 18.38 1219 1219 MS2 18/26 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.47 0.00 0 3 77 2 604.81580 1208.62432 7.04 29.70 2580 2580 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.47 0.00 0 2 15 2 604.81519 1208.62309 6.03 29.86 3064 3064 MS2 16/20 Linfeng_20120125_PCAF_1.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 187 2.47 0.00 0 3 18 2 570.27686 1139.54643 5.49 32.80 3776 3776 MS2 13/16 Linfeng_20120125_PCAF_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 2.47 0.00 0 19 100 2 665.32745 1329.64763 6.19 25.98 2146 2146 MS2 19/22 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.47 0.00 0 16 100 2 597.31616 1193.62505 7.48 33.00 3491 3491 MS2 17/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 395 2.47 0.00 0 31 100 2 597.31500 1193.62273 5.54 31.59 3481 3481 MS2 17/18 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.47 0.00 0 21 100 2 597.31598 1193.62468 7.17 30.23 2858 2858 MS2 17/18 Linfeng_20120125_PCAF_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 328 2.47 0.00 0 23 100 2 665.32825 1329.64922 7.38 28.84 2278 2278 MS2 18/22 Linfeng_20120125_PCAF_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 314 2.47 0.00 0 30 100 2 919.96655 1838.92583 6.15 44.53 5864 5864 MS2 18/42 Linfeng_20120125_PCAF_9.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 2.47 0.00 0 16 100 2 597.31610 1193.62493 7.38 30.65 2942 2942 MS2 16/18 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.46 0.00 0 14 100 2 597.31592 1193.62456 7.07 29.94 2590 2590 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 439 2.46 0.00 0 37 100 2 686.36401 1371.72075 6.74 42.62 5703 5703 MS2 19/22 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 436 2.46 0.00 0 26 100 2 597.31604 1193.62480 7.27 30.25 2686 2686 MS2 17/18 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.46 0.00 0 39 100 2 597.31519 1193.62309 5.84 30.55 2555 2555 MS2 15/18 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 2.46 0.00 0 16 100 2 597.31580 1193.62432 6.86 30.05 2649 2649 MS2 17/18 Linfeng_20120125_PCAF_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.46 0.00 0 38 25 2 597.31018 1193.61308 -2.54 30.58 3505 3505 MS2 17/18 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 2.46 0.00 0 25 25 2 597.31195 1193.61662 0.42 56.91 6794 6794 MS2 15/18 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 2.45 0.00 0 57 100 2 597.31604 1193.62480 7.27 32.03 3262 3262 MS2 15/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 2.45 0.00 0 23 100 2 597.31635 1193.62541 7.79 30.78 2748 2748 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 2.45 0.00 0 14 25 2 566.25970 1131.51213 1.94 21.68 1866 1866 MS2 17/18 Linfeng_122411_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.45 0.00 1 14 25 2 668.85712 1336.70696 -2.85 25.06 2760 2760 MS2 17/22 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 409 2.45 0.00 0 25 100 2 597.31598 1193.62468 7.17 30.49 2572 2572 MS2 16/18 Linfeng_20120125_PCAF_7.raw Medium GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 2.45 0.00 0 19 25 3 580.90570 1740.70255 -1.77 17.83 1759 1759 MS2 31/76 Linfeng_091311_rIgG_6.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 2.45 0.00 0 15 25 2 566.25641 1131.50554 -3.88 24.78 2750 2750 MS2 17/18 Linfeng_091311_rIgG_8.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 2.44 0.00 0 5 13 2 566.25647 1131.50566 -3.78 24.52 2720 2720 MS2 17/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.44 0.00 0 13 100 2 597.31567 1193.62407 6.66 29.83 2567 2567 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 445 2.44 0.00 0 29 100 2 686.36389 1371.72051 6.56 11.13 790 790 MS2 19/22 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.44 0.00 0 8 100 2 597.31567 1193.62407 6.66 30.34 2543 2543 MS2 15/18 Linfeng_20120125_PCAF_7.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.44 0.00 1 24 25 2 644.30841 1287.60954 -1.17 18.79 1638 1638 MS2 13/20 Linfeng_091311_rIgG_1.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 535 2.43 0.00 0 7 7 2 487.26852 973.52977 -1.60 4.01 424 424 MS2 13/14 Linfeng_122411_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 303 2.43 0.00 0 17 100 2 665.32849 1329.64971 7.75 27.09 2508 2508 MS2 18/22 Linfeng_20120125_PCAF_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 2.43 0.00 0 23 100 2 665.32770 1329.64812 6.56 25.90 2129 2129 MS2 19/22 Linfeng_20120125_PCAF_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 235 2.43 0.00 0 23 25 2 627.80957 1254.61186 3.58 21.42 1586 1586 MS2 17/26 Linfeng_122411_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.43 0.00 0 2 100 2 604.81604 1208.62480 7.45 29.97 2596 2596 MS2 15/20 Linfeng_20120125_PCAF_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 420 2.42 0.00 0 7 100 2 597.31604 1193.62480 7.27 29.59 3104 3104 MS2 16/18 Linfeng_20120125_PCAF_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.42 0.00 0 12 100 2 597.31598 1193.62468 7.17 30.31 2540 2540 MS2 17/18 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.42 0.00 0 6 100 2 604.81549 1208.62370 6.54 29.92 2616 2616 MS2 15/20 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.42 0.00 0 6 100 2 597.31610 1193.62493 7.38 29.67 3125 3125 MS2 17/18 Linfeng_20120125_PCAF_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.42 0.00 0 15 100 2 597.31580 1193.62432 6.86 29.72 2421 2421 MS2 17/18 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.42 0.00 0 23 100 2 597.31616 1193.62505 7.48 33.39 3586 3586 MS2 17/18 Linfeng_20120125_PCAF_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.41 0.00 0 22 100 2 597.31592 1193.62456 7.07 33.23 3548 3548 MS2 17/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 390 2.41 0.00 0 49 100 2 597.31610 1193.62493 7.38 31.25 2850 2850 MS2 16/18 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.41 0.00 0 23 100 2 597.31531 1193.62334 6.05 30.18 2491 2491 MS2 16/18 Linfeng_20120125_PCAF_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.41 0.00 0 46 25 2 597.31274 1193.61821 1.75 27.82 2266 2266 MS2 15/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.41 0.00 0 7 25 2 566.25714 1131.50701 -2.59 24.80 2716 2716 MS2 16/18 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.41 0.00 0 3 82 2 604.81500 1208.62273 5.73 29.51 2546 2546 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.40 0.00 0 22 100 2 597.31580 1193.62432 6.86 27.52 2610 2610 MS2 17/18 Linfeng_20120125_PCAF_8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 2.40 0.00 0 3 25 2 871.38123 1741.75517 3.80 17.37 1311 1311 MS2 21/44 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.40 0.00 0 14 100 2 597.31610 1193.62493 7.38 29.80 2596 2596 MS2 16/18 Linfeng_20120125_PCAF_2.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 366 2.40 0.00 1 12 25 3 655.66541 1964.98166 1.59 33.04 3195 3195 MS2 23/68 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 423 2.40 0.00 0 17 100 2 597.31537 1193.62346 6.15 27.55 2160 2160 MS2 16/18 Linfeng_20120125_PCAF_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.39 0.00 0 33 100 2 597.31592 1193.62456 7.07 30.30 3258 3258 MS2 17/18 Linfeng_20120125_PCAF_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 266 2.39 0.00 0 34 80 2 665.32782 1329.64836 6.74 28.76 2803 2803 MS2 18/22 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw Medium VRFLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 312 2.39 0.00 1 46 25 3 577.65790 1730.95914 2.47 25.30 2175 2175 MS2 24/52 Linfeng_122411_rIgG_2.raw Medium MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 314 2.38 0.00 0 15 100 3 820.07312 2458.20481 2.83 44.64 6615 6615 MS2 18/96 Linfeng_20120125_PCAF_1.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.38 0.00 1 6 100 3 655.66602 1964.98349 2.52 43.51 6338 6338 MS2 20/68 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 2.38 0.00 0 29 25 2 597.31018 1193.61308 -2.54 29.09 3407 3407 MS2 17/18 Linfeng_091311_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.38 0.00 0 24 100 2 597.31598 1193.62468 7.17 30.10 2647 2647 MS2 16/18 Linfeng_20120125_PCAF_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 248 2.37 0.00 0 6 100 2 627.81104 1254.61479 5.92 20.66 1535 1535 MS2 20/26 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 427 2.37 0.00 0 26 100 2 597.31549 1193.62370 6.35 30.46 2567 2567 MS2 16/18 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 416 2.37 0.00 0 46 100 2 738.40057 1475.79387 5.79 38.23 4200 4200 MS2 14/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 220 2.37 0.00 0 11 100 2 627.81067 1254.61406 5.33 20.67 1377 1377 MS2 17/26 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 284 2.37 0.00 0 20 100 2 554.27820 1107.54912 5.57 19.46 1265 1265 MS2 14/16 Linfeng_20120125_PCAF_1.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 2.37 0.00 0 35 25 2 566.25592 1131.50456 -4.75 24.59 2778 2778 MS2 14/18 Linfeng_091311_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 267 2.36 0.00 0 20 100 2 665.32721 1329.64714 5.82 26.93 2101 2101 MS2 17/22 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 427 2.36 0.00 0 26 100 2 597.31543 1193.62358 6.25 30.19 2519 2519 MS2 16/18 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.36 0.00 0 3 60 2 604.81598 1208.62468 7.35 29.86 2614 2614 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.36 0.00 0 5 57 2 604.81598 1208.62468 7.35 29.94 2631 2631 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 2.36 0.00 0 10 25 2 519.26776 1037.52825 1.93 25.20 2161 2161 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 448 2.35 0.00 0 35 25 3 398.54367 1193.61646 0.28 26.31 2310 2310 MS2 18/36 Linfeng_122411_rIgG_2.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 2.35 0.00 0 12 25 2 566.25677 1131.50627 -3.24 24.48 2673 2673 MS2 15/18 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.35 0.00 0 11 100 2 730.90564 1460.80400 3.02 48.72 7151 7151 MS2 17/22 Linfeng_20120125_PCAF_10.raw Medium GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 2.35 0.00 0 8 25 3 580.90564 1740.70237 -1.88 17.55 1701 1701 MS2 34/76 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 278 2.35 0.00 0 23 100 2 919.96655 1838.92583 6.15 46.83 6708 6708 MS2 20/42 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.35 0.00 0 17 100 2 597.31573 1193.62419 6.76 29.76 2769 2769 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 2.35 0.00 0 30 100 2 597.31628 1193.62529 7.68 30.97 2785 2785 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 405 2.34 0.00 0 27 100 2 597.31598 1193.62468 7.17 30.26 2863 2863 MS2 16/18 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.34 0.00 0 5 55 2 604.81598 1208.62468 7.35 29.97 2636 2636 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 438 2.34 0.00 0 33 100 2 597.31549 1193.62370 6.35 32.19 3300 3300 MS2 16/18 Linfeng_20120125_PCAF_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.33 0.00 0 4 87 2 604.81506 1208.62285 5.83 29.78 2594 2594 MS2 15/20 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 249 2.33 0.00 0 0 100 2 627.81134 1254.61540 6.40 18.38 1381 1381 MS2 19/26 Linfeng_20120125_PCAF_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 294 2.33 0.00 0 9 100 2 554.27869 1107.55010 6.45 19.48 1457 1457 MS2 14/16 Linfeng_20120125_PCAF_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.32 0.00 0 5 51 2 604.81592 1208.62456 7.25 30.09 2655 2655 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 23 25 2 519.26373 1037.52019 -5.83 26.10 2940 2940 MS2 12/16 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 2.31 0.00 0 7 100 2 665.32672 1329.64617 5.09 29.63 2567 2567 MS2 18/22 Linfeng_20120125_PCAF_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 301 2.31 0.00 0 23 100 2 665.32806 1329.64885 7.11 27.15 2321 2321 MS2 13/22 Linfeng_20120125_PCAF_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 282 2.31 0.00 0 15 100 2 554.27850 1107.54973 6.12 17.65 1297 1297 MS2 14/16 Linfeng_20120125_PCAF_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.31 0.00 0 20 100 2 597.31549 1193.62370 6.35 30.15 2513 2513 MS2 15/18 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.31 0.00 0 4 100 2 604.81592 1208.62456 7.25 30.05 2833 2833 MS2 15/20 Linfeng_20120125_PCAF_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.30 0.00 0 8 93 2 604.81561 1208.62395 6.74 30.05 2639 2639 MS2 15/20 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 418 2.30 0.00 0 54 100 2 597.31512 1193.62297 5.74 30.61 2735 2735 MS2 16/18 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 373 2.30 0.00 0 17 21 2 604.81030 1208.61333 -2.05 29.84 3340 3340 MS2 15/20 Linfeng_091311_rIgG_5.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 203 2.30 0.00 0 4 100 2 599.28198 1197.55669 5.98 14.17 937 937 MS2 16/28 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.30 0.00 0 26 100 2 597.31592 1193.62456 7.07 30.03 2609 2609 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 2.30 0.00 0 30 100 2 597.31653 1193.62578 8.09 30.74 2739 2739 MS2 16/18 Linfeng_20120125_PCAF_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.30 0.00 0 5 100 2 604.81555 1208.62383 6.64 29.21 2505 2505 MS2 15/20 Linfeng_20120125_PCAF_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 274 2.29 0.00 0 60 100 2 665.32556 1329.64385 3.34 29.07 2316 2316 MS2 16/22 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.29 0.00 0 29 100 2 597.31696 1193.62663 8.81 33.82 3684 3684 MS2 16/18 Linfeng_20120125_PCAF_10.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 175 2.29 0.00 0 31 25 2 599.28040 1197.55351 3.33 16.04 1217 1217 MS2 16/28 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 2.29 0.00 0 28 100 2 597.31555 1193.62383 6.46 30.31 2513 2513 MS2 16/18 Linfeng_20120125_PCAF_3.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.29 0.00 1 0 100 3 655.66638 1964.98459 3.08 43.88 5800 5800 MS2 18/68 Linfeng_20120125_PCAF_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 289 2.28 0.00 0 20 100 2 554.27832 1107.54936 5.79 17.63 1128 1128 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 2.28 0.00 0 41 100 2 597.31616 1193.62505 7.48 33.58 3630 3630 MS2 15/18 Linfeng_20120125_PCAF_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.28 0.00 0 33 100 2 597.31622 1193.62517 7.58 30.40 2717 2717 MS2 16/18 Linfeng_20120125_PCAF_4.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.27 0.00 0 3 100 2 604.81586 1208.62444 7.15 29.40 2529 2529 MS2 14/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.27 0.00 0 8 63 2 604.81506 1208.62285 5.83 30.18 2658 2658 MS2 15/20 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 438 2.27 0.00 0 32 100 2 597.31567 1193.62407 6.66 30.15 2488 2488 MS2 17/18 Linfeng_20120125_PCAF_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 234 2.27 0.00 0 9 100 2 627.81152 1254.61577 6.69 20.44 1540 1540 MS2 18/26 Linfeng_20120125_PCAF_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.27 0.00 0 10 100 2 604.81573 1208.62419 6.94 29.04 2477 2477 MS2 15/20 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 8 46 2 604.81604 1208.62480 7.45 30.14 2665 2665 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 315 2.26 0.00 0 8 100 2 604.81635 1208.62541 7.95 29.33 2360 2360 MS2 15/20 Linfeng_20120125_PCAF_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.26 0.00 0 3 100 2 604.81628 1208.62529 7.85 29.82 2435 2435 MS2 15/20 Linfeng_20120125_PCAF_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.26 0.00 0 3 100 2 604.81616 1208.62505 7.65 29.73 2551 2551 MS2 15/20 Linfeng_20120125_PCAF_9.raw Medium AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.26 0.00 0 26 25 3 369.85086 1107.53803 -4.44 21.90 2350 2350 MS2 14/32 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.26 0.00 0 3 53 2 604.81580 1208.62432 7.04 30.05 2648 2648 MS2 15/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.26 0.00 0 15 100 2 554.27875 1107.55022 6.56 17.56 1249 1249 MS2 14/16 Linfeng_20120125_PCAF_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 2.26 0.00 0 30 100 2 627.81128 1254.61528 6.31 21.83 1665 1665 MS2 15/26 Linfeng_20120125_PCAF_10.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 208 2.26 0.00 0 21 100 2 627.81171 1254.61614 6.99 20.79 1332 1332 MS2 17/26 Linfeng_20120125_PCAF_3.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 414 2.26 0.00 2 6 100 2 597.81274 1194.61821 5.73 14.55 918 918 MS2 14/16 Linfeng_20120125_PCAF_1.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.25 0.00 0 5 68 2 604.81561 1208.62395 6.74 29.80 2600 2600 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.25 0.00 0 43 100 2 597.31494 1193.62261 5.43 31.87 3547 3547 MS2 15/18 Linfeng_20120125_PCAF_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 268 2.25 0.00 0 64 25 2 919.95728 1838.90727 -3.94 59.24 6809 6809 MS2 17/42 Linfeng_091311_rIgG_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 2.25 0.00 0 23 100 2 627.81195 1254.61662 7.38 18.35 1185 1185 MS2 19/26 Linfeng_20120125_PCAF_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.24 0.00 0 2 100 2 604.81573 1208.62419 6.94 30.01 2605 2605 MS2 15/20 Linfeng_20120125_PCAF_9.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 159 2.24 0.00 0 27 25 2 599.28076 1197.55425 3.95 16.05 1304 1304 MS2 15/28 Linfeng_122411_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.24 0.00 0 3 100 2 604.81586 1208.62444 7.15 29.27 2513 2513 MS2 15/20 Linfeng_20120125_PCAF_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 266 2.24 0.00 0 13 100 2 627.81116 1254.61504 6.11 20.64 1454 1454 MS2 18/26 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 423 2.23 0.00 0 27 100 2 597.31580 1193.62432 6.86 30.06 2642 2642 MS2 17/18 Linfeng_20120125_PCAF_2.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 200 2.23 0.00 0 7 100 2 599.28210 1197.55693 6.19 14.14 1091 1091 MS2 17/28 Linfeng_20120125_PCAF_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.23 0.00 0 2 100 2 604.81592 1208.62456 7.25 29.78 2562 2562 MS2 15/20 Linfeng_20120125_PCAF_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 366 2.23 0.00 0 6 81 2 604.81537 1208.62346 6.34 29.95 2805 2805 MS2 15/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 2.23 0.00 0 32 100 2 665.32806 1329.64885 7.11 28.93 2293 2293 MS2 16/22 Linfeng_20120125_PCAF_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.23 0.00 0 31 100 2 597.31622 1193.62517 7.58 33.68 3652 3652 MS2 16/18 Linfeng_20120125_PCAF_10.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 18 25 2 519.26367 1037.52007 -5.95 26.14 2636 2636 MS2 12/16 Linfeng_091311_rIgG_1.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 666 2.22 0.00 0 10 25 2 487.27020 973.53313 1.85 20.12 1734 1734 MS2 13/14 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.22 0.00 0 4 100 2 604.81592 1208.62456 7.25 29.10 2481 2481 MS2 15/20 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.22 0.00 0 3 100 2 604.81567 1208.62407 6.84 29.34 2520 2520 MS2 15/20 Linfeng_20120125_PCAF_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 428 2.22 0.00 0 40 100 2 597.31604 1193.62480 7.27 33.78 3675 3675 MS2 16/18 Linfeng_20120125_PCAF_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 2.22 0.00 0 21 25 2 566.25635 1131.50542 -3.99 24.70 2676 2676 MS2 12/18 Linfeng_091311_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 244 2.22 0.00 0 18 100 2 665.32770 1329.64812 6.56 29.75 2591 2591 MS2 18/22 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.21 0.00 0 20 25 2 604.80963 1208.61199 -3.16 29.81 3435 3435 MS2 15/20 Linfeng_091311_rIgG_8.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 289 2.21 0.00 0 56 25 2 519.26514 1037.52300 -3.13 28.73 3300 3300 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.21 0.00 0 3 100 2 604.81543 1208.62358 6.44 29.09 2486 2486 MS2 15/20 Linfeng_20120125_PCAF_2.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.21 0.00 0 49 100 2 519.27063 1037.53398 7.46 26.49 1881 1881 MS2 14/16 Linfeng_20120125_PCAF_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 286 2.21 0.00 0 8 100 2 554.27844 1107.54961 6.01 17.71 1169 1169 MS2 13/16 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.20 0.00 0 26 100 2 597.31531 1193.62334 6.05 29.87 3154 3154 MS2 17/18 Linfeng_20120125_PCAF_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 2.20 0.00 0 30 100 2 686.36426 1371.72124 7.10 40.85 5257 5257 MS2 16/22 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.20 0.00 0 4 100 2 604.81592 1208.62456 7.25 29.83 2600 2600 MS2 15/20 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.19 0.00 0 3 100 2 604.81476 1208.62224 5.33 29.27 2507 2507 MS2 15/20 Linfeng_20120125_PCAF_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 499 2.19 0.00 0 44 25 2 487.26721 973.52715 -4.30 27.89 3240 3240 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.19 0.00 0 19 25 2 730.90607 1460.80486 3.60 42.37 3242 3242 MS2 14/22 Linfeng_122411_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.19 0.00 0 5 100 2 604.81616 1208.62505 7.65 30.16 2634 2634 MS2 15/20 Linfeng_20120125_PCAF_9.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.19 0.00 0 23 25 2 597.31104 1193.61479 -1.11 52.09 6315 6315 MS2 14/18 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 296 2.18 0.00 0 20 100 2 665.32648 1329.64568 4.72 29.83 3055 3055 MS2 18/22 Linfeng_20120125_PCAF_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.18 0.00 0 18 25 2 604.80981 1208.61235 -2.85 29.79 3368 3368 MS2 15/20 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 2.18 0.00 0 6 100 2 604.81567 1208.62407 6.84 29.16 2331 2331 MS2 15/20 Linfeng_20120125_PCAF_3.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 205 2.18 0.00 0 12 25 2 390.19299 779.37871 -1.05 15.12 1382 1382 MS2 15/16 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 381 2.18 0.00 1 72 100 2 807.43359 1613.85991 6.51 47.18 7223 7223 MS2 16/26 Linfeng_20120125_PCAF_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.18 0.00 0 3 100 2 604.81604 1208.62480 7.45 29.48 2382 2382 MS2 15/20 Linfeng_20120125_PCAF_3.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 217 2.18 0.00 0 7 25 2 390.19250 779.37773 -2.31 14.84 1357 1357 MS2 15/16 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 221 2.17 0.00 0 18 25 2 390.19308 779.37889 -0.82 14.18 1236 1236 MS2 15/16 Linfeng_091311_rIgG_3.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 2.17 0.00 0 4 100 2 604.81580 1208.62432 7.04 29.54 2559 2559 MS2 15/20 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.16 0.00 0 5 100 2 604.81592 1208.62456 7.25 29.93 2452 2452 MS2 15/20 Linfeng_20120125_PCAF_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 2.16 0.00 0 7 63 2 604.81482 1208.62236 5.43 30.42 2701 2701 MS2 15/20 Linfeng_20120125_PCAF_2.raw High EIKIEISELNR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 2.16 0.00 1 45 100 2 672.38501 1343.76274 7.27 39.04 4665 4665 MS2 12/20 Linfeng_20120125_PCAF_4.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.15 0.00 0 1 100 2 604.81580 1208.62432 7.04 29.48 2548 2548 MS2 15/20 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.14 0.00 0 5 100 2 604.81604 1208.62480 7.45 30.08 2616 2616 MS2 15/20 Linfeng_20120125_PCAF_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 448 2.14 0.00 0 22 100 2 597.31598 1193.62468 7.17 30.14 2654 2654 MS2 16/18 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 339 2.14 0.00 0 6 100 2 604.81555 1208.62383 6.64 30.08 2505 2505 MS2 15/20 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.14 0.00 0 4 100 2 604.81567 1208.62407 6.84 29.16 2491 2491 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 2.14 0.00 0 16 100 2 604.81451 1208.62175 4.92 28.87 2831 2831 MS2 15/20 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 448 2.14 0.00 0 52 100 2 597.31537 1193.62346 6.15 32.08 3600 3600 MS2 16/18 Linfeng_20120125_PCAF_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 50 2.14 0.00 0 15 25 2 871.38141 1741.75554 4.01 17.54 1380 1380 MS2 17/44 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 51 2.13 0.00 0 9 25 2 871.38165 1741.75603 4.29 17.54 1303 1303 MS2 18/44 Linfeng_122411_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.13 0.00 0 52 100 2 597.31531 1193.62334 6.05 32.17 3622 3622 MS2 14/18 Linfeng_20120125_PCAF_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 299 2.13 0.00 0 56 100 2 665.32617 1329.64507 4.26 29.62 3007 3007 MS2 17/22 Linfeng_20120125_PCAF_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.12 0.00 0 4 100 2 604.81549 1208.62370 6.54 29.16 2498 2498 MS2 15/20 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 621 2.11 0.00 0 6 25 2 487.27039 973.53349 2.22 21.13 1853 1853 MS2 13/14 Linfeng_122411_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.11 0.00 0 11 51 2 604.81494 1208.62261 5.63 30.63 2762 2762 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 2.10 0.00 0 20 25 2 604.81348 1208.61968 3.21 23.69 1780 1780 MS2 13/20 Linfeng_122411_rIgG_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 397 2.10 0.00 0 51 100 2 597.31635 1193.62541 7.79 33.87 3692 3692 MS2 15/18 Linfeng_20120125_PCAF_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 302 2.10 0.00 0 44 100 2 665.32654 1329.64580 4.81 29.96 2623 2623 MS2 16/22 Linfeng_20120125_PCAF_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.10 0.00 0 27 25 2 597.31140 1193.61553 -0.50 49.10 5938 5938 MS2 15/18 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 4 12 2 487.26746 973.52764 -3.80 27.83 2867 2867 MS2 13/14 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 2.09 0.00 0 3 4 2 627.80841 1254.60954 1.73 3.06 282 282 MS2 14/26 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High SLVGLGGTK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.09 0.00 0 27 25 2 416.25143 831.49559 2.53 19.35 1531 1531 MS2 12/16 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.09 0.00 0 7 100 2 604.81573 1208.62419 6.94 30.43 2903 2903 MS2 15/20 Linfeng_20120125_PCAF_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 2.09 0.00 0 21 25 2 604.81244 1208.61760 1.49 26.12 2209 2209 MS2 15/20 Linfeng_122411_rIgG_8.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.09 0.00 0 43 25 2 604.81390 1208.62053 3.91 21.39 1622 1622 MS2 12/20 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.09 0.00 0 18 100 2 604.81573 1208.62419 6.94 29.04 2667 2667 MS2 14/20 Linfeng_20120125_PCAF_10.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 142 2.09 0.00 0 18 100 2 566.26245 1131.51763 6.80 24.62 1862 1862 MS2 11/18 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.09 0.00 0 58 25 2 597.31226 1193.61724 0.93 53.50 6473 6473 MS2 14/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 2.08 0.00 0 19 100 2 604.81567 1208.62407 6.84 28.94 2632 2632 MS2 14/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.07 0.00 0 5 100 2 604.81519 1208.62309 6.03 29.26 2345 2345 MS2 15/20 Linfeng_20120125_PCAF_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 459 2.07 0.00 0 33 100 2 686.36475 1371.72222 7.81 40.85 4768 4768 MS2 18/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 358 2.07 0.00 1 67 100 2 807.43182 1613.85637 4.32 47.28 6616 6616 MS2 15/26 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 2.07 0.00 0 8 85 2 604.81567 1208.62407 6.84 30.33 2688 2688 MS2 15/20 Linfeng_20120125_PCAF_2.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 2.07 0.00 0 37 100 2 519.26971 1037.53215 5.70 30.25 3158 3158 MS2 14/16 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.06 0.00 0 44 100 2 597.31567 1193.62407 6.66 30.52 2552 2552 MS2 16/18 Linfeng_20120125_PCAF_3.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.06 0.00 0 25 14 2 566.25702 1131.50676 -2.80 24.29 2388 2388 MS2 16/18 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 628 2.05 0.00 0 5 6 2 487.27060 973.53392 2.66 23.88 1993 1993 MS2 13/14 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 366 2.04 0.00 0 7 100 2 604.81549 1208.62370 6.54 30.25 2650 2650 MS2 15/20 Linfeng_20120125_PCAF_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 81 2.04 0.00 0 59 25 2 660.79419 1320.58110 -1.37 20.07 1809 1809 MS2 21/30 Linfeng_091311_rIgG_1.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.04 0.00 0 8 100 2 604.81580 1208.62432 7.04 30.65 2574 2574 MS2 15/20 Linfeng_20120125_PCAF_3.raw High DVDNAYMIK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 208 2.04 0.00 0 19 25 2 534.75586 1068.50444 1.28 25.36 2183 2183 MS2 13/16 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 658 2.03 0.00 0 31 25 2 487.27039 973.53349 2.22 19.09 1617 1617 MS2 13/14 Linfeng_122411_rIgG_5.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 168 2.03 0.00 0 34 25 2 599.27997 1197.55266 2.62 16.24 1302 1302 MS2 18/28 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.03 0.00 0 21 100 2 604.81445 1208.62163 4.82 29.07 2358 2358 MS2 14/20 Linfeng_20120125_PCAF_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.03 0.00 0 7 46 2 604.81610 1208.62493 7.55 30.35 2706 2706 MS2 15/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 559 2.02 0.00 0 1 5 2 487.26843 973.52959 -1.79 4.39 464 464 MS2 12/14 Linfeng_122411_rIgG_8.raw High LQGEIAHVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 249 2.02 0.00 0 27 25 2 497.78625 994.56523 -2.83 18.15 1786 1786 MS2 15/16 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 380 2.02 0.00 0 6 25 2 487.26999 973.53270 1.41 26.44 2500 2500 MS2 13/14 Linfeng_122411_rIgG_6.raw High DVDNAYMIK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 2.02 0.00 0 26 25 2 534.75580 1068.50432 1.17 25.11 2367 2367 MS2 13/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 417 2.02 0.00 0 43 100 2 597.31580 1193.62432 6.86 30.22 2667 2667 MS2 15/18 Linfeng_20120125_PCAF_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.01 0.00 0 4 100 2 604.81598 1208.62468 7.35 29.88 2578 2578 MS2 15/20 Linfeng_20120125_PCAF_9.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 689 2.01 0.00 0 15 25 2 487.27081 973.53435 3.10 24.52 2045 2045 MS2 13/14 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 2.01 0.00 0 4 100 2 604.81592 1208.62456 7.25 29.59 2567 2567 MS2 15/20 Linfeng_20120125_PCAF_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.01 0.00 0 11 25 2 487.26993 973.53258 1.28 22.16 1982 1982 MS2 13/14 Linfeng_122411_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.01 0.00 0 43 100 2 597.31616 1193.62505 7.48 33.97 3717 3717 MS2 14/18 Linfeng_20120125_PCAF_10.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.00 0.00 0 39 25 2 487.26990 973.53252 1.22 25.03 2255 2255 MS2 13/14 Linfeng_122411_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00021405.3 Isoform A of Lamin-A/C 54.37 12 33 35 74 73.83 41.72 25 27 52.49 25.60 16 19 77.03 25.45 12 28 664 74.1 7.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 258 4.33 0.00 0 0 100 2 1183.09131 2365.17534 6.87 24.73 1664 1664 MS2 26/52 Linfeng_20120125_PCAF_3.raw High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 280 4.29 0.00 0 3 25 3 789.05408 2365.14768 -4.83 26.03 2885 2885 MS2 42/104 Linfeng_091311_rIgG_4.raw High AQHEDQVEQYKK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 266 3.91 0.00 1 7 25 3 501.57910 1502.72275 -0.46 14.57 1280 1280 MS2 27/44 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 293 3.81 0.00 0 8 25 2 876.92944 1752.85161 -6.17 26.49 2949 2949 MS2 22/30 Linfeng_091311_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 262 3.78 0.00 0 2 25 2 783.88116 1566.75505 2.74 27.17 2541 2541 MS2 22/32 Linfeng_122411_rIgG_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 439 3.63 0.00 0 6 25 3 477.60077 1430.78775 1.93 33.61 3383 3383 MS2 29/48 Linfeng_122411_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 287 3.56 0.00 0 8 100 2 783.88531 1566.76335 8.04 30.59 2565 2565 MS2 18/32 Linfeng_20120125_PCAF_3.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 221 3.51 0.00 0 15 25 2 783.87781 1566.74834 -1.55 29.02 3296 3296 MS2 22/32 Linfeng_091311_rIgG_4.raw High IRIDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 191 3.47 0.00 1 9 25 3 567.32977 1699.97477 2.70 35.07 3568 3568 MS2 29/56 Linfeng_122411_rIgG_4.raw High LRITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 472 3.42 0.00 1 68 25 3 473.25989 1417.76511 0.36 23.98 2113 2113 MS2 20/44 Linfeng_122411_rIgG_4.raw High SGAQASSTPLSPTR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 382 3.39 0.00 0 13 25 2 680.34595 1359.68462 -1.27 20.50 2120 2120 MS2 20/26 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 355 3.36 0.00 0 5 100 2 876.94000 1752.87273 5.88 30.19 2494 2494 MS2 21/30 Linfeng_20120125_PCAF_3.raw High AGQVVTIWAAGAGATHSPPTDLVWK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 312 3.34 0.00 0 18 25 3 845.10944 2533.31375 -2.43 39.51 4657 4657 MS2 34/96 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 352 3.32 0.00 0 1 4 3 584.95758 1752.85819 -2.41 4.23 484 484 MS2 27/60 Linfeng_122411_rIgG_4.raw High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 329 3.28 0.00 0 28 100 3 789.06335 2365.17551 6.94 25.19 1710 1710 MS2 34/104 Linfeng_20120125_PCAF_3.raw High SNEDQSMGNWQIK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 93 3.23 0.00 0 8 100 2 768.84583 1536.68437 6.23 31.22 2680 2680 MS2 19/24 Linfeng_20120125_PCAF_3.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 286 3.17 0.00 0 6 100 2 783.88428 1566.76128 6.71 29.56 2393 2393 MS2 20/32 Linfeng_20120125_PCAF_3.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 464 3.16 0.00 0 14 22 2 514.79120 1028.57512 1.54 29.61 2865 2865 MS2 15/16 Linfeng_122411_rIgG_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 409 3.10 0.00 0 15 21 2 715.89417 1430.78105 -2.75 34.73 4046 4046 MS2 18/24 Linfeng_091311_rIgG_4.raw High LQEKEDLQELNDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 364 3.08 0.00 1 17 100 3 543.94446 1629.81882 6.68 21.55 1384 1384 MS2 25/48 Linfeng_20120125_PCAF_3.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 388 3.07 0.00 0 25 25 3 584.95959 1752.86423 1.03 25.40 2362 2362 MS2 17/60 Linfeng_122411_rIgG_6.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 377 3.05 0.00 0 5 22 2 514.78882 1028.57036 -3.09 31.20 3586 3586 MS2 15/16 Linfeng_091311_rIgG_4.raw High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 7 100 3 789.06372 2365.17661 7.40 24.67 1656 1656 MS2 33/104 Linfeng_20120125_PCAF_3.raw High LQEKEDLQELNDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 346 2.90 0.00 1 20 100 3 543.94360 1629.81626 5.11 21.45 1437 1437 MS2 22/48 Linfeng_20120125_PCAF_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 286 2.90 0.00 0 38 100 2 783.88470 1566.76213 7.26 30.04 2645 2645 MS2 16/32 Linfeng_20120125_PCAF_4.raw High ITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 377 2.89 0.00 0 4 14 2 574.79193 1148.57659 -2.46 20.88 2171 2171 MS2 17/18 Linfeng_091311_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 279 2.88 0.00 0 22 100 2 783.88519 1566.76311 7.88 30.07 2652 2652 MS2 17/32 Linfeng_20120125_PCAF_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 381 2.87 0.00 0 4 100 2 876.94104 1752.87480 7.06 30.06 2650 2650 MS2 17/30 Linfeng_20120125_PCAF_4.raw High SLETENAGLR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 438 2.86 0.00 0 18 5 2 545.28052 1089.55376 0.21 3.50 367 367 MS2 17/18 Linfeng_122411_rIgG_4.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 457 2.81 0.00 0 11 100 2 514.79419 1028.58110 7.35 35.06 3749 3749 MS2 15/16 Linfeng_20120125_PCAF_4.raw High LRDLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 545 2.77 0.00 1 5 17 3 396.55014 1187.63587 -1.75 4.64 545 545 MS2 22/36 Linfeng_122411_rIgG_4.raw High SNEDQSMGNWQIK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 104 2.76 0.00 0 6 100 2 768.84686 1536.68645 7.58 31.15 2865 2865 MS2 17/24 Linfeng_20120125_PCAF_4.raw High VAVEEVDEEGK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 185 2.73 0.00 0 13 25 2 602.28949 1203.57170 -1.92 21.62 2274 2274 MS2 18/20 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 406 2.73 0.00 0 14 100 3 584.96277 1752.87375 6.46 30.11 2661 2661 MS2 17/60 Linfeng_20120125_PCAF_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 293 2.72 0.00 0 49 100 2 783.88489 1566.76250 7.49 29.93 2629 2629 MS2 18/32 Linfeng_20120125_PCAF_4.raw High AQNTWGcGNSLR Unambiguous 9 1 IPI00021405.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.70 0.00 0 3 25 2 682.31061 1363.61394 -2.40 24.57 2685 2685 MS2 18/22 Linfeng_091311_rIgG_4.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 463 2.69 0.00 0 9 100 2 514.79425 1028.58122 7.47 35.14 3513 3513 MS2 15/16 Linfeng_20120125_PCAF_3.raw High LKDLEALLNSK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 351 2.68 0.00 1 3 23 3 415.24753 1243.72803 1.88 33.12 3320 3320 MS2 27/40 Linfeng_122411_rIgG_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 339 2.67 0.00 0 67 100 2 715.90173 1430.79619 7.83 40.56 4701 4701 MS2 19/24 Linfeng_20120125_PCAF_3.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 292 2.63 0.00 0 83 100 2 783.88513 1566.76299 7.80 29.85 2612 2612 MS2 13/32 Linfeng_20120125_PCAF_4.raw High ITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 376 2.62 0.00 0 0 25 2 574.79102 1148.57475 -4.05 21.05 2159 2159 MS2 14/18 Linfeng_091311_rIgG_5.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 335 2.59 0.00 0 9 21 3 584.95624 1752.85416 -4.71 26.37 2932 2932 MS2 24/60 Linfeng_091311_rIgG_4.raw High EDLQELNDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 137 2.57 0.00 0 11 25 2 566.26544 1131.52361 -3.63 24.27 2644 2644 MS2 15/16 Linfeng_091311_rIgG_4.raw High LKDLEALLNSK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 358 2.56 0.00 1 2 15 3 415.24533 1243.72144 -3.42 34.20 3976 3976 MS2 23/40 Linfeng_091311_rIgG_4.raw High VAVEEVDEEGKFVR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 421 2.56 0.00 1 38 25 2 803.41205 1605.81682 3.02 24.31 2158 2158 MS2 19/26 Linfeng_122411_rIgG_4.raw High ASSHSSQTQGGGSVTK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 249 2.52 0.00 0 24 25 3 506.91171 1518.72058 4.11 1.63 157 157 MS2 26/60 Linfeng_122411_rIgG_4.raw High EAALSTALSEK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 427 2.48 0.00 0 36 25 2 560.29974 1119.59221 2.64 20.22 1676 1676 MS2 14/20 Linfeng_122411_rIgG_4.raw Medium KLLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 447 2.45 0.00 1 74 25 3 368.19531 1102.57138 -2.32 17.84 1742 1742 MS2 22/32 Linfeng_091311_rIgG_4.raw High SLETENAGLR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 476 2.37 0.00 0 10 14 2 545.27893 1089.55058 -2.70 22.51 2398 2398 MS2 17/18 Linfeng_091311_rIgG_4.raw High VAVEEVDEEGKFVR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 441 2.35 0.00 1 24 100 2 803.41431 1605.82134 5.83 29.62 2565 2565 MS2 17/26 Linfeng_20120125_PCAF_4.raw High TVLcGTcGQPADK Unambiguous 6 1 IPI00021405.3 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 143 2.33 0.00 0 16 25 2 703.82294 1406.63860 -1.23 20.51 2121 2121 MS2 19/24 Linfeng_091311_rIgG_4.raw Medium AQHEDQVEQYK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 143 2.32 0.00 0 20 25 3 458.88022 1374.62610 -1.72 16.74 1588 1588 MS2 19/40 Linfeng_091311_rIgG_4.raw High VAVEEVDEEGKFVR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 401 2.30 0.00 1 12 100 2 803.41522 1605.82317 6.97 29.60 2401 2401 MS2 13/26 Linfeng_20120125_PCAF_3.raw High EAALSTALSEK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 518 2.28 0.00 0 35 25 2 560.29388 1119.58049 -7.82 26.52 2954 2954 MS2 16/20 Linfeng_091311_rIgG_4.raw High LAVYIDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 211 2.27 0.00 0 16 25 2 425.24588 849.48448 1.85 24.17 2139 2139 MS2 11/12 Linfeng_122411_rIgG_4.raw Medium LRDLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 477 2.25 0.00 1 41 19 3 396.54797 1187.62937 -7.22 26.52 2953 2953 MS2 19/36 Linfeng_091311_rIgG_4.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 505 2.24 0.00 0 41 100 2 514.79395 1028.58061 6.88 35.42 3574 3574 MS2 15/16 Linfeng_20120125_PCAF_3.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw High LQTMKEELDFQK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 356 2.20 0.00 1 35 100 2 755.38971 1509.77214 6.83 34.00 3507 3507 MS2 14/22 Linfeng_20120125_PCAF_4.raw High LRITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 486 2.20 0.00 1 58 25 2 709.38733 1417.76738 1.96 24.09 2129 2129 MS2 11/22 Linfeng_122411_rIgG_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 323 2.19 0.00 0 39 100 2 715.90167 1430.79607 7.74 40.54 5008 5008 MS2 18/24 Linfeng_20120125_PCAF_4.raw High DLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 352 2.16 0.00 0 16 25 2 459.73074 918.45421 1.59 25.02 2253 2253 MS2 13/14 Linfeng_122411_rIgG_4.raw High DLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 397 2.14 0.00 0 22 25 2 459.72894 918.45061 -2.33 27.83 3134 3134 MS2 13/14 Linfeng_091311_rIgG_4.raw High AAYEAELGDAR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 222 2.13 0.00 0 25 25 2 583.27618 1165.54509 -2.88 24.75 2711 2711 MS2 17/20 Linfeng_091311_rIgG_4.raw High LEAALGEAK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 408 2.11 0.00 0 23 25 2 451.25201 901.49675 -2.47 21.83 2303 2303 MS2 13/16 Linfeng_091311_rIgG_4.raw High LAVYIDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 210 2.10 0.00 0 32 25 2 425.24423 849.48119 -2.03 27.54 3094 3094 MS2 11/12 Linfeng_091311_rIgG_4.raw High TALINSTGEEVAMR Unambiguous 8 1 IPI00021405.3 CID 1.0000 0.0000 1 1 417 2.07 0.00 0 10 100 2 746.38251 1491.75774 7.03 31.27 2889 2889 MS2 19/26 Linfeng_20120125_PCAF_4.raw High TALINSTGEEVAMR Unambiguous 8 1 IPI00021405.3 CID 1.0000 0.0000 1 1 423 2.07 0.00 0 10 25 2 746.37964 1491.75200 3.18 27.70 2610 2610 MS2 19/26 Linfeng_122411_rIgG_4.raw High LKDLEALLNSK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 290 2.06 0.00 1 22 100 2 622.37073 1243.73418 6.82 46.33 6081 6081 MS2 15/20 Linfeng_20120125_PCAF_3.raw High QNGDDPLLTYR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 301 2.06 0.00 0 32 25 2 646.31616 1291.62505 -2.09 30.65 3515 3515 MS2 15/20 Linfeng_091311_rIgG_4.raw High LRDLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 544 2.06 0.00 1 10 25 2 594.32098 1187.63469 -2.74 4.76 562 562 MS2 15/18 Linfeng_122411_rIgG_4.raw High TALINSTGEEVAMR Unambiguous 8 1 IPI00021405.3 CID 1.0000 0.0000 1 1 427 2.05 0.00 0 7 100 2 746.38257 1491.75786 7.11 31.35 2707 2707 MS2 18/26 Linfeng_20120125_PCAF_3.raw High TLEGELHDLR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 367 2.05 0.00 0 41 100 2 591.81384 1182.62041 7.63 37.01 3933 3933 MS2 16/18 Linfeng_20120125_PCAF_3.raw High NIYSEELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 249 2.01 0.00 0 12 25 2 512.25732 1023.50737 -3.14 4.72 557 557 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00023126.1 WD repeat-containing protein 46 13.28 7 5 5 8 8.32 7.05 3 3 19.11 11.80 4 5 610 68.0 9.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SELLLAEEPGFLEGEDGEDTAK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 144 4.96 0.00 0 1 25 2 1175.05603 2349.10478 2.83 39.98 4185 4185 MS2 23/42 Linfeng_122411_rIgG_4.raw High SELLLAEEPGFLEGEDGEDTAK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 208 3.84 0.00 0 24 25 3 783.70648 2349.10489 2.87 39.93 4179 4179 MS2 29/84 Linfeng_122411_rIgG_4.raw High SRLEVAEAEEEETSIK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 379 3.73 0.00 1 29 25 3 607.30371 1819.89658 2.48 26.27 2421 2421 MS2 29/60 Linfeng_122411_rIgG_4.raw High FLHSEALLAVAQNR Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 360 3.41 0.00 0 15 25 3 523.62408 1568.85770 2.09 32.42 3231 3231 MS2 27/52 Linfeng_122411_rIgG_4.raw High RYWEEETVPTTAGASPGPPR Unambiguous 4 1 IPI00023126.1 CID 1.0000 0.0000 1 1 314 3.16 0.00 1 3 25 3 734.36133 2201.06943 3.25 27.01 2519 2519 MS2 30/76 Linfeng_122411_rIgG_4.raw High FLHSEALLAVAQNR Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 387 3.10 0.00 0 8 25 3 523.62189 1568.85111 -2.11 33.34 3865 3865 MS2 25/52 Linfeng_091311_rIgG_4.raw High RYWEEETVPTTAGASPGPPR Unambiguous 4 1 IPI00023126.1 CID 1.0000 0.0000 1 1 278 2.82 0.00 1 5 25 3 734.35712 2201.05680 -2.49 28.48 3223 3223 MS2 24/76 Linfeng_091311_rIgG_4.raw High GTYQPLSTR Unambiguous 3 1 IPI00023126.1 CID 1.0000 0.0000 1 1 362 2.40 0.00 0 17 25 2 511.76578 1022.52428 -2.23 22.26 2362 2362 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00024279.4 HEAT repeat-containing protein 1 18.42 2 28 28 43 15.26 2.71 4 6 89.86 16.60 25 30 19.78 2.99 5 7 2144 242.2 6.54 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NTSELVSSEVYLLSALAALQK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 243 4.83 0.00 0 9 25 3 746.07635 2236.21451 3.27 53.48 5759 5759 MS2 33/80 Linfeng_122411_rIgG_2.raw High LLETVLGYISAVAQSMER Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 354 4.74 0.00 0 33 25 3 660.68958 1980.05417 3.56 55.70 6001 6001 MS2 35/68 Linfeng_122411_rIgG_2.raw High SQDLESVQEVGGSYWQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 213 4.37 0.00 0 5 100 2 984.46570 1967.92412 7.46 38.51 5155 5155 MS2 22/32 Linfeng_20120125_PCAF_1.raw High ITKPFFAAISDEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 391 4.36 0.00 0 6 25 3 489.60193 1466.79123 1.50 31.10 2946 2946 MS2 28/48 Linfeng_122411_rIgG_2.raw High FAALITVLALAEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 48 3.56 0.00 0 21 25 2 680.41785 1359.82842 2.74 48.37 5138 5138 MS2 22/24 Linfeng_122411_rIgG_2.raw High SQDLESVQEVGGSYWQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 226 3.42 0.00 0 0 100 2 984.46539 1967.92351 7.15 38.47 5144 5144 MS2 19/32 Linfeng_20120125_PCAF_1.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 130 3.41 0.00 0 6 25 3 514.64087 1541.90805 1.94 44.71 4673 4673 MS2 27/48 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 306 3.33 0.00 0 11 25 2 721.86395 1442.72063 3.05 32.43 3119 3119 MS2 20/22 Linfeng_122411_rIgG_2.raw High GWEEALENVIK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 426 3.32 0.00 0 8 25 2 644.33472 1287.66216 3.22 42.99 4453 4453 MS2 17/20 Linfeng_122411_rIgG_2.raw High ELYAGMPTIQITALEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 364 3.32 0.00 0 11 25 2 889.47650 1777.94573 2.92 40.35 4118 4118 MS2 21/30 Linfeng_122411_rIgG_2.raw High GIPVELWAHYVEELNSTQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 337 3.28 0.00 0 6 25 3 747.71747 2241.13785 3.53 45.29 4748 4748 MS2 30/72 Linfeng_122411_rIgG_2.raw High IISVFVDALPHVPEHR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 342 3.26 0.00 0 4 25 4 458.00781 1829.00942 1.37 36.27 3603 3603 MS2 37/90 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 321 3.25 0.00 0 20 25 3 481.57800 1442.71946 2.23 32.52 3130 3130 MS2 24/44 Linfeng_122411_rIgG_2.raw High HQLASISSPVVTSLLINLGSPVK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 45 3.18 0.00 0 17 25 3 787.45844 2360.36075 2.49 44.62 4661 4661 MS2 29/88 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 131 3.06 0.00 0 19 25 3 566.67188 1698.00107 3.61 50.30 5379 5379 MS2 26/56 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 149 3.04 0.00 0 15 25 3 566.66998 1697.99540 0.27 51.46 5987 5987 MS2 23/56 Linfeng_091311_rIgG_1.raw High SQDLESVQEVGGSYWQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 201 2.98 0.00 0 0 100 2 984.46411 1967.92095 5.85 38.90 5248 5248 MS2 17/32 Linfeng_20120125_PCAF_1.raw High DGLScLIVLLQR Unambiguous 2 1 IPI00024279.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 415 2.95 0.00 0 26 25 2 693.89441 1386.78154 2.98 49.44 5273 5273 MS2 17/22 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 99 2.91 0.00 0 6 25 2 849.50446 1698.00163 3.94 50.29 5378 5378 MS2 20/28 Linfeng_122411_rIgG_2.raw High TDEAFFDSENDPEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 26 2.90 0.00 0 23 25 2 822.34180 1643.67632 3.34 28.41 2592 2592 MS2 17/26 Linfeng_122411_rIgG_2.raw High YNEFSVSLLNEDPK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 256 2.89 0.00 0 8 25 2 827.90326 1654.79924 1.99 36.15 3588 3588 MS2 20/26 Linfeng_122411_rIgG_2.raw High ELYAGMPTIQITALEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 432 2.82 0.00 0 23 25 3 593.32037 1777.94657 3.39 40.36 4119 4119 MS2 24/60 Linfeng_122411_rIgG_2.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 119 2.77 0.00 0 22 25 2 771.45844 1541.90959 2.94 44.67 4668 4668 MS2 20/24 Linfeng_122411_rIgG_2.raw High EELTSHQSQLTAFFLEALDFR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 317 2.76 0.00 0 24 25 3 828.08441 2482.23868 5.52 50.26 5375 5375 MS2 20/80 Linfeng_122411_rIgG_2.raw High FAALITVLALAEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 84 2.75 0.00 0 65 25 2 680.41479 1359.82231 -1.75 49.44 5741 5741 MS2 21/24 Linfeng_091311_rIgG_1.raw High DEVASLLFDPK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 391 2.73 0.00 0 8 25 2 617.32275 1233.63823 1.64 39.43 4003 4003 MS2 16/20 Linfeng_122411_rIgG_2.raw High TIQQLETVLGEPLQSYF Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 381 2.65 0.00 0 28 25 3 656.01276 1966.02372 3.49 52.03 5591 5591 MS2 19/64 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 322 2.57 0.00 0 11 100 2 721.86658 1442.72588 6.69 37.54 4926 4926 MS2 19/22 Linfeng_20120125_PCAF_1.raw Medium VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 168 2.49 0.00 0 4 25 3 514.63824 1541.90018 -3.17 45.83 5279 5279 MS2 22/48 Linfeng_091311_rIgG_1.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 153 2.47 0.00 0 29 25 2 771.45374 1541.90019 -3.16 45.74 5267 5267 MS2 18/24 Linfeng_091311_rIgG_1.raw Medium AYDLLDKVNALLPTETFIPVIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 92 2.47 0.00 1 14 25 3 834.47534 2501.41147 3.99 49.54 5285 5285 MS2 25/84 Linfeng_122411_rIgG_2.raw High VTLILELLQHK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 39 2.40 0.00 0 15 53 2 653.91235 1306.81743 6.18 55.27 8189 8189 MS2 17/20 Linfeng_20120125_PCAF_1.raw Medium TIQQLETVLGEPLQSYF Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 397 2.38 0.00 0 26 25 3 656.01202 1966.02152 2.37 53.14 6169 6169 MS2 20/64 Linfeng_091311_rIgG_1.raw High GLVGNPLPSVR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 215 2.35 0.00 0 15 25 2 554.82721 1108.64714 -0.22 29.89 2787 2787 MS2 17/20 Linfeng_122411_rIgG_2.raw Medium TIQQLETVLGEPLQSYF Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 385 2.27 0.00 0 50 25 3 656.01312 1966.02481 4.05 52.01 5592 5592 MS2 20/64 Linfeng_122411_rIgG_3.raw High SLDIFIK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 143 2.24 0.00 0 3 25 2 418.25006 835.49285 0.51 34.57 3389 3389 MS2 11/12 Linfeng_122411_rIgG_2.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 177 2.12 0.00 0 51 25 2 771.45502 1541.90276 -1.49 45.96 5472 5472 MS2 14/24 Linfeng_091311_rIgG_3.raw High ALDLLNNK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 348 2.09 0.00 0 20 25 2 450.76151 900.51573 0.87 27.09 2415 2415 MS2 12/14 Linfeng_122411_rIgG_2.raw High NGEWYEVLK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 305 2.07 0.00 0 17 25 2 569.28345 1137.55962 1.83 35.21 3470 3470 MS2 14/16 Linfeng_122411_rIgG_2.raw High VFSLLQK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 148 2.06 0.00 0 27 25 2 417.75879 834.51030 2.28 30.71 2894 2894 MS2 11/12 Linfeng_122411_rIgG_2.raw High LALPQSDASLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 336 2.03 0.00 0 33 25 2 685.88660 1370.76592 1.49 33.25 3221 3221 MS2 15/24 Linfeng_122411_rIgG_2.raw High TLDVVLEEHLK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 273 2.03 0.00 0 49 100 2 648.36859 1295.72991 7.18 42.54 6103 6103 MS2 14/20 Linfeng_20120125_PCAF_1.raw High LALPQSDASLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 354 2.02 0.00 0 36 100 2 685.89075 1370.77422 7.55 40.32 5579 5579 MS2 12/24 Linfeng_20120125_PCAF_1.raw IPI00025039.1 rRNA 2'-O-methyltransferase fibrillarin 39.88 1 9 9 29 31.04 27.10 5 11 19.84 26.79 6 7 26.64 18.07 5 11 321 33.8 10.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 238 3.88 0.00 0 12 25 4 854.94049 3416.74013 -2.49 44.16 5210 5210 MS2 57/192 Linfeng_091311_rIgG_7.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 290 3.66 0.00 0 29 14 3 511.95630 1533.85434 0.43 4.38 482 482 MS2 28/52 Linfeng_122411_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 350 3.27 0.00 0 20 25 3 511.95465 1533.84940 -2.80 23.44 2529 2529 MS2 29/52 Linfeng_091311_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 363 3.16 0.00 0 6 25 3 511.95477 1533.84977 -2.56 23.50 2512 2512 MS2 29/52 Linfeng_091311_rIgG_7.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 304 2.99 0.00 1 1 25 2 755.87347 1510.73967 0.81 24.48 2235 2235 MS2 19/24 Linfeng_122411_rIgG_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 72 2.99 0.00 0 3 15 4 468.78073 1872.10109 -2.97 32.90 3795 3795 MS2 44/108 Linfeng_091311_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 289 2.96 0.00 0 15 100 3 511.95892 1533.86222 5.56 20.84 1550 1550 MS2 22/52 Linfeng_20120125_PCAF_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 72 2.95 0.00 0 12 25 4 468.78076 1872.10122 -2.90 32.93 3788 3788 MS2 40/108 Linfeng_091311_rIgG_7.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 57 2.94 0.00 0 12 25 4 468.78253 1872.10830 0.88 32.01 3234 3234 MS2 38/108 Linfeng_122411_rIgG_6.raw High LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 32 2.83 0.00 0 34 100 3 624.71057 1872.11716 5.61 47.17 6790 6790 MS2 23/72 Linfeng_20120125_PCAF_6.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 274 2.77 0.00 1 4 25 2 755.86871 1510.73015 -5.49 26.02 2853 2853 MS2 17/24 Linfeng_091311_rIgG_7.raw High ANcIDSTASAEAVFASEVK Unambiguous 1 1 IPI00025039.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.65 0.00 0 24 25 2 985.46307 1969.91887 0.83 36.25 3767 3767 MS2 13/36 Linfeng_122411_rIgG_6.raw High LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 70 2.65 0.00 0 6 25 3 624.70502 1872.10050 -3.29 32.98 3795 3795 MS2 28/72 Linfeng_091311_rIgG_7.raw High IVALNAHTFLR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 186 2.64 0.00 0 22 25 2 627.87079 1254.73430 2.02 31.47 3165 3165 MS2 17/20 Linfeng_122411_rIgG_6.raw High SGRDLINLAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 593 2.62 0.00 1 19 19 3 362.88025 1086.62619 -0.41 24.54 2244 2244 MS2 21/36 Linfeng_122411_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 352 2.60 0.00 0 31 25 3 511.95508 1533.85068 -1.96 23.62 2526 2526 MS2 19/52 Linfeng_091311_rIgG_9.raw Medium DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 285 2.46 0.00 0 5 100 3 511.95898 1533.86240 5.68 21.86 1624 1624 MS2 25/52 Linfeng_20120125_PCAF_6.raw Medium RVSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 382 2.45 0.00 2 36 100 3 556.28833 1666.85044 6.52 25.94 2098 2098 MS2 29/52 Linfeng_20120125_PCAF_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 69 2.39 0.00 0 19 25 3 624.70496 1872.10031 -3.38 32.97 3803 3803 MS2 28/72 Linfeng_091311_rIgG_6.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 296 2.35 0.00 1 4 100 2 755.87842 1510.74956 7.36 25.54 2034 2034 MS2 17/24 Linfeng_20120125_PCAF_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 32 2.33 0.00 0 31 100 3 624.71063 1872.11734 5.71 47.44 6857 6857 MS2 24/72 Linfeng_20120125_PCAF_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 55 2.33 0.00 0 7 25 3 624.70740 1872.10764 0.53 32.10 3246 3246 MS2 24/72 Linfeng_122411_rIgG_6.raw Medium RVSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 383 2.33 0.00 2 24 100 3 556.28876 1666.85172 7.29 25.91 2093 2093 MS2 23/52 Linfeng_20120125_PCAF_6.raw High IVALNAHTFLR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 203 2.33 0.00 0 23 100 2 627.87384 1254.74040 6.88 43.05 5786 5786 MS2 14/20 Linfeng_20120125_PCAF_6.raw Medium RVSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 382 2.29 0.00 2 32 100 3 556.28839 1666.85062 6.63 26.03 2114 2114 MS2 25/52 Linfeng_20120125_PCAF_6.raw Medium RVSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 377 2.29 0.00 2 54 100 3 556.28778 1666.84879 5.54 26.06 2121 2121 MS2 26/52 Linfeng_20120125_PCAF_6.raw Medium VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 299 2.25 0.00 1 10 13 3 504.24808 1510.72968 -5.80 25.98 2848 2848 MS2 24/48 Linfeng_091311_rIgG_7.raw High HEGVFIcR Unambiguous 1 1 IPI00025039.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 237 2.12 0.00 0 7 25 2 509.24896 1017.49065 -2.81 22.77 2411 2411 MS2 13/14 Linfeng_091311_rIgG_7.raw High IVALNAHTFLR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 169 2.04 0.00 0 24 100 2 627.87329 1254.73931 6.00 43.14 5808 5808 MS2 14/20 Linfeng_20120125_PCAF_6.raw IPI00026089.4 Splicing factor 3B subunit 1 20.78 2 19 19 33 51.55 13.80 13 17 27.14 11.27 10 10 15.50 3.37 3 6 1304 145.7 7.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 254 4.70 0.00 0 7 25 3 678.70953 2034.11405 -0.89 49.31 5965 5965 MS2 34/64 Linfeng_091311_rIgG_2.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 196 4.48 0.00 0 21 25 2 1017.56079 2034.11431 -0.76 49.31 5964 5964 MS2 25/32 Linfeng_091311_rIgG_2.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 186 4.13 0.00 0 10 25 2 1017.56482 2034.12236 3.20 48.05 5096 5096 MS2 24/32 Linfeng_122411_rIgG_3.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 238 3.83 0.00 0 17 25 3 678.71033 2034.11643 0.28 49.38 5901 5901 MS2 32/64 Linfeng_091311_rIgG_3.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 198 3.77 0.00 0 20 25 2 1017.56104 2034.11479 -0.52 49.46 5912 5912 MS2 21/32 Linfeng_091311_rIgG_3.raw High SLVEIIEHGLVDEQQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 385 3.39 0.00 0 15 25 3 612.99646 1836.97483 2.49 42.48 4378 4378 MS2 27/60 Linfeng_122411_rIgG_3.raw High SLVEIIEHGLVDEQQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 370 3.37 0.00 0 17 25 3 612.99329 1836.96531 -2.69 43.20 5192 5192 MS2 28/60 Linfeng_091311_rIgG_2.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 375 3.29 0.00 0 3 100 2 901.46259 1801.91789 6.24 38.46 4229 4229 MS2 22/30 Linfeng_20120125_PCAF_2.raw High AIGPHDVLATLLNNLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 159 3.09 0.00 0 0 25 3 563.66034 1688.96646 -1.77 48.35 5845 5845 MS2 27/60 Linfeng_091311_rIgG_2.raw High AFAVVASALGIPSLLPFLK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 34 3.02 0.00 0 8 25 2 957.58069 1914.15410 4.03 53.87 5811 5811 MS2 16/36 Linfeng_122411_rIgG_3.raw High IADREDEYKK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 324 3.00 0.00 2 25 25 3 422.88168 1266.63050 -1.59 13.96 1233 1233 MS2 20/36 Linfeng_091311_rIgG_2.raw High QLVDTTVELANK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 491 2.82 0.00 0 13 25 2 665.86566 1330.72405 2.04 28.17 2529 2529 MS2 19/22 Linfeng_122411_rIgG_3.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 370 2.76 0.00 0 29 100 2 901.46326 1801.91924 6.98 38.60 5175 5175 MS2 17/30 Linfeng_20120125_PCAF_1.raw High VGAAEIISR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 616 2.76 0.00 0 37 25 2 458.26495 915.52263 -3.53 24.98 2784 2784 MS2 15/16 Linfeng_091311_rIgG_2.raw High GDTPGHATPGHGGATSSAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 153 2.75 0.00 0 5 25 3 578.60229 1733.79233 -1.59 12.68 1053 1053 MS2 27/72 Linfeng_091311_rIgG_2.raw High VQENcIDLVGR Unambiguous 2 1 IPI00026089.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 334 2.63 0.00 0 27 25 2 651.82477 1302.64226 -3.74 28.55 3275 3275 MS2 17/20 Linfeng_091311_rIgG_2.raw High THEDIEAQIR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 262 2.62 0.00 0 33 25 3 404.53748 1211.59787 -3.03 21.81 2336 2336 MS2 19/36 Linfeng_091311_rIgG_2.raw High SLVEIIEHGLVDEQQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 326 2.61 0.00 0 30 100 2 918.99390 1836.98052 5.59 55.34 7068 7068 MS2 17/30 Linfeng_20120125_PCAF_2.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 361 2.56 0.00 0 36 100 2 901.46259 1801.91789 6.24 38.74 5209 5209 MS2 17/30 Linfeng_20120125_PCAF_1.raw High QLVDTTVELANK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 435 2.53 0.00 0 28 25 2 665.86243 1330.71758 -2.82 29.98 3470 3470 MS2 19/22 Linfeng_091311_rIgG_2.raw High GGDSIGETPTPGASK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 182 2.51 0.00 0 13 25 2 687.32928 1373.65129 -2.26 20.78 2193 2193 MS2 19/28 Linfeng_091311_rIgG_2.raw Medium DTPGHGSGWAETPR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 122 2.49 0.00 0 27 25 3 489.89023 1467.65613 -3.45 22.26 2400 2400 MS2 22/52 Linfeng_091311_rIgG_2.raw Medium AIGPHDVLATLLNNLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 140 2.46 0.00 0 22 25 3 563.66290 1688.97416 2.78 47.42 5016 5016 MS2 28/60 Linfeng_122411_rIgG_3.raw High VQENcIDLVGR Unambiguous 2 1 IPI00026089.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.42 0.00 0 29 25 2 651.82874 1302.65019 2.36 25.72 2204 2204 MS2 15/20 Linfeng_122411_rIgG_3.raw High VVNGAAASQPPSK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 324 2.40 0.00 0 12 25 2 613.32922 1225.65117 -1.97 15.87 1502 1502 MS2 17/24 Linfeng_091311_rIgG_2.raw Medium AIGPHDVLATLLNNLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 155 2.34 0.00 0 17 25 3 563.66150 1688.96994 0.29 48.50 5792 5792 MS2 23/60 Linfeng_091311_rIgG_3.raw Medium SVNDQPSGNLPFLKPDDIQYFDK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 296 2.34 0.00 0 6 25 3 879.76782 2637.28891 2.15 39.71 4019 4019 MS2 27/88 Linfeng_122411_rIgG_3.raw High IcFELLELLK Unambiguous 2 1 IPI00026089.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 2.32 0.00 0 12 25 2 639.36426 1277.72124 2.98 47.69 5050 5050 MS2 16/18 Linfeng_122411_rIgG_3.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 388 2.26 0.00 0 13 100 2 901.46307 1801.91887 6.78 39.04 4336 4336 MS2 16/30 Linfeng_20120125_PCAF_2.raw Medium IWDPTPSHTPAGAATPGR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 327 2.26 0.00 0 26 21 3 611.30402 1831.89750 -6.10 26.02 2928 2928 MS2 30/68 Linfeng_091311_rIgG_2.raw High VPELNVQNGVLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 226 2.19 0.00 0 49 25 2 655.37817 1309.74907 1.21 30.44 2828 2828 MS2 17/22 Linfeng_122411_rIgG_3.raw High ATVNTFGYIAK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 337 2.06 0.00 0 10 25 2 592.82050 1184.63371 2.26 28.42 2562 2562 MS2 18/20 Linfeng_122411_rIgG_3.raw High QLVDTTVELANK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 455 2.02 0.00 0 18 100 2 665.86847 1330.72966 6.26 31.51 2897 2897 MS2 13/22 Linfeng_20120125_PCAF_2.raw IPI00026167.5 NHP2-like protein 1 24.22 2 3 3 4 0.00 13.34 24.22 3 4 0.00 128 14.2 8.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EGSQLKQQIQSIQQSIER Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 369 4.85 0.00 1 8 25 3 700.70734 2100.10746 1.43 34.70 3259 3259 MS2 33/68 Linfeng_122411_rIgG_10.raw High LLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 365 2.94 0.00 0 20 25 3 494.25494 1480.75028 2.56 30.92 2765 2765 MS2 28/44 Linfeng_122411_rIgG_10.raw High KLLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 428 2.89 0.00 1 19 25 3 536.95294 1608.84427 1.75 30.16 2663 2663 MS2 29/48 Linfeng_122411_rIgG_10.raw High LLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 320 2.66 0.00 0 6 25 2 740.87891 1480.75054 2.74 30.84 2754 2754 MS2 19/22 Linfeng_122411_rIgG_10.raw IPI00026272.2 Histone H2A type 1-B/E 63.08 3 3 10 176 153.21 30.77 5 48 367.34 63.08 9 114 35.57 26.92 3 14 130 14.1 11.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 111 5.62 0.00 0 3 25 3 972.53668 2915.59549 2.63 56.94 4866 4866 MS2 37/112 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 110 5.22 0.00 0 11 25 4 729.65460 2915.59658 3.00 56.95 4867 4867 MS2 53/168 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 118 4.94 0.00 0 29 25 4 729.65344 2915.59194 1.41 57.26 6002 6002 MS2 44/168 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.79 0.00 0 5 25 4 483.54880 1931.17336 2.30 44.25 4524 4524 MS2 49/108 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.77 0.00 0 10 25 4 483.54861 1931.17263 1.92 43.83 4430 4430 MS2 54/108 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 2 25 3 644.39636 1931.17453 2.91 52.18 5464 5464 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.68 0.00 0 24 25 3 644.39594 1931.17325 2.25 43.60 4400 4400 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.65 0.00 0 7 25 3 644.39673 1931.17563 3.48 47.06 4841 4841 MS2 36/72 Linfeng_122411_rIgG_10.raw High LLGRVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 6 4.61 0.00 1 23 25 3 790.81982 2370.44492 -6.21 49.31 6023 6023 MS2 40/88 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.57 0.00 0 11 25 3 644.39423 1931.16812 -0.41 48.54 5927 5927 MS2 36/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.57 0.00 0 2 25 3 644.39661 1931.17527 3.29 44.66 4534 4534 MS2 35/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.56 0.00 0 5 25 3 644.39642 1931.17472 3.01 46.02 4708 4708 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.55 0.00 0 8 25 3 644.39746 1931.17783 4.62 43.91 4321 4321 MS2 33/72 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.51 0.00 0 11 25 4 483.54669 1931.16494 -2.06 45.52 5543 5543 MS2 50/108 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.50 0.00 0 11 25 3 644.39447 1931.16886 -0.03 45.48 5376 5376 MS2 41/72 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.49 0.00 0 4 25 3 644.39606 1931.17362 2.44 44.03 4178 4178 MS2 35/72 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.47 0.00 0 8 25 3 644.39685 1931.17600 3.67 44.08 4593 4593 MS2 38/72 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.46 0.00 0 8 25 3 644.39355 1931.16611 -1.45 45.40 5399 5399 MS2 39/72 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.44 0.00 0 27 25 3 644.39667 1931.17545 3.39 56.29 5915 5915 MS2 36/72 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 131 4.40 0.00 2 25 25 3 711.40387 2132.19706 1.64 34.64 3252 3252 MS2 36/68 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.40 0.00 0 5 25 3 644.39618 1931.17398 2.63 48.07 4970 4970 MS2 32/72 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 117 4.37 0.00 0 17 25 4 729.65350 2915.59218 1.49 57.24 5691 5691 MS2 47/168 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.32 0.00 0 11 25 3 644.39618 1931.17398 2.63 44.07 4501 4501 MS2 36/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.29 0.00 0 4 25 3 644.39386 1931.16703 -0.98 45.22 5379 5379 MS2 37/72 Linfeng_091311_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.28 0.00 0 5 25 3 644.39636 1931.17453 2.91 51.15 5343 5343 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.27 0.00 0 13 11 3 644.39471 1931.16959 0.35 44.02 4951 4951 MS2 37/72 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 130 4.23 0.00 2 3 11 4 533.80487 2132.19765 1.92 34.57 3244 3244 MS2 33/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.23 0.00 0 24 25 3 644.39587 1931.17307 2.15 43.84 4717 4717 MS2 33/72 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.22 0.00 0 30 25 3 644.39270 1931.16355 -2.78 45.44 5472 5472 MS2 38/72 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 4 25 2 966.09082 1931.17436 2.82 44.08 4184 4184 MS2 22/36 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 2 25 2 966.09119 1931.17510 3.20 46.06 4713 4713 MS2 21/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.17 0.00 0 5 17 3 644.39270 1931.16355 -2.78 45.12 5188 5188 MS2 35/72 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.17 0.00 0 4 25 3 644.39673 1931.17563 3.48 49.11 5101 5101 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.11 0.00 0 29 25 3 644.39398 1931.16739 -0.79 45.18 5500 5500 MS2 37/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.10 0.00 0 36 25 3 644.39435 1931.16849 -0.22 47.41 5785 5785 MS2 35/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.06 0.00 0 2 25 2 966.09186 1931.17644 3.90 44.00 4332 4332 MS2 22/36 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.06 0.00 0 27 25 3 644.39343 1931.16574 -1.64 45.55 5384 5384 MS2 37/72 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.06 0.00 0 3 25 3 644.39685 1931.17600 3.67 53.20 5578 5578 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.99 0.00 0 5 25 3 644.39655 1931.17508 3.20 50.13 5223 5223 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 22 3.98 0.00 0 8 25 3 644.39307 1931.16465 -2.21 45.32 5460 5460 MS2 36/72 Linfeng_091311_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.96 0.00 0 6 25 2 966.09174 1931.17620 3.77 54.23 5685 5685 MS2 18/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.94 0.00 0 17 25 3 644.39386 1931.16703 -0.98 45.42 5364 5364 MS2 36/72 Linfeng_091311_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.91 0.00 0 17 25 3 644.39343 1931.16574 -1.64 45.38 5370 5370 MS2 35/72 Linfeng_091311_rIgG_6.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 5 3.89 0.00 1 0 25 2 1030.13843 2059.26958 2.77 40.63 4017 4017 MS2 22/38 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.89 0.00 0 18 25 3 644.39539 1931.17160 1.39 44.06 4583 4583 MS2 37/72 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.88 0.00 0 5 25 3 644.39697 1931.17636 3.86 55.25 5788 5788 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.87 0.00 0 0 25 3 644.39404 1931.16758 -0.69 49.62 6062 6062 MS2 30/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.84 0.00 0 50 25 3 644.39691 1931.17618 3.76 45.13 4632 4632 MS2 33/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.83 0.00 0 16 25 2 966.08679 1931.16631 -1.35 45.62 5393 5393 MS2 24/36 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.80 0.00 0 13 25 2 966.08539 1931.16350 -2.80 45.14 5191 5191 MS2 20/36 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.80 0.00 0 3 25 3 644.39661 1931.17527 3.29 54.22 5684 5684 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.80 0.00 0 1 25 2 966.09125 1931.17522 3.27 44.68 4536 4536 MS2 23/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.79 0.00 0 16 25 2 966.09174 1931.17620 3.77 43.64 4405 4405 MS2 24/36 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 117 3.78 0.00 0 13 25 3 972.53644 2915.59476 2.38 57.25 5692 5692 MS2 31/112 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.77 0.00 0 3 25 2 966.09076 1931.17424 2.76 44.13 4509 4509 MS2 24/36 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.74 0.00 0 12 25 2 966.08539 1931.16350 -2.80 45.54 5485 5485 MS2 23/36 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.73 0.00 0 8 25 2 966.09180 1931.17632 3.83 43.93 4729 4729 MS2 20/36 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.71 0.00 0 12 25 2 966.08685 1931.16643 -1.29 45.58 5388 5388 MS2 23/36 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 3.70 0.00 0 1 10 3 644.39294 1931.16428 -2.40 46.18 5628 5628 MS2 36/72 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 282 3.69 0.00 1 5 4 2 846.95844 1692.90959 3.99 3.11 277 277 MS2 20/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.67 0.00 0 2 25 2 966.09210 1931.17693 4.15 51.16 5344 5344 MS2 22/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.63 0.00 0 6 25 2 966.09161 1931.17595 3.65 44.13 4598 4598 MS2 21/36 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.62 0.00 0 0 7 2 966.09143 1931.17558 3.46 48.63 7126 7126 MS2 25/36 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.60 0.00 0 28 25 2 966.08691 1931.16655 -1.22 45.49 5384 5384 MS2 23/36 Linfeng_091311_rIgG_6.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 3.56 0.00 1 18 25 3 564.97296 1692.90433 0.89 25.58 2051 2051 MS2 23/52 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 307 3.55 0.00 1 6 25 2 846.95795 1692.90862 3.42 24.71 1945 1945 MS2 21/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.52 0.00 0 12 33 3 644.39667 1931.17545 3.39 48.64 7129 7129 MS2 33/72 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.51 0.00 0 22 25 3 644.39441 1931.16867 -0.12 50.80 6213 6213 MS2 26/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.48 0.00 0 18 25 4 483.54871 1931.17299 2.11 44.26 4207 4207 MS2 40/108 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.43 0.00 0 11 25 4 483.54865 1931.17275 1.99 44.10 4345 4345 MS2 41/108 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.41 0.00 0 18 25 3 644.39667 1931.17545 3.39 43.73 4657 4657 MS2 31/72 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 11 3.41 0.00 0 0 100 2 966.09314 1931.17900 5.23 55.11 7764 7764 MS2 22/36 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.39 0.00 0 0 25 2 966.09052 1931.17375 2.51 48.08 4971 4971 MS2 19/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.38 0.00 0 37 25 3 644.39343 1931.16574 -1.64 58.33 6085 6085 MS2 28/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.36 0.00 0 30 25 2 966.08630 1931.16533 -1.85 46.59 5680 5680 MS2 18/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.34 0.00 0 6 25 2 966.09216 1931.17705 4.21 53.21 5579 5579 MS2 20/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 24 25 2 966.09277 1931.17827 4.85 55.32 5797 5797 MS2 17/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.28 0.00 0 14 25 2 966.09180 1931.17632 3.83 43.74 4659 4659 MS2 19/36 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.25 0.00 0 22 25 2 966.08600 1931.16472 -2.17 45.35 5522 5522 MS2 22/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.23 0.00 0 13 25 2 966.09106 1931.17485 3.08 44.20 4601 4601 MS2 21/36 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.18 0.00 0 28 25 3 644.39532 1931.17142 1.30 52.25 6382 6382 MS2 32/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.17 0.00 0 5 25 2 966.08673 1931.16619 -1.41 45.25 5383 5383 MS2 21/36 Linfeng_091311_rIgG_3.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 3.17 0.00 1 5 1 3 564.97400 1692.90744 2.72 3.08 272 272 MS2 24/52 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.09 0.00 0 31 25 2 966.09320 1931.17912 5.29 52.19 5465 5465 MS2 21/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 388 3.07 0.00 1 18 25 4 423.98187 1692.90566 1.67 24.37 2220 2220 MS2 30/78 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.05 0.00 0 51 25 2 966.08636 1931.16545 -1.79 45.42 5401 5401 MS2 21/36 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 2.99 0.00 0 6 25 2 966.09113 1931.17497 3.14 50.14 5225 5225 MS2 20/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.94 0.00 1 12 25 3 564.97351 1692.90598 1.86 24.93 2055 2055 MS2 24/52 Linfeng_122411_rIgG_8.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.92 0.00 1 33 25 3 564.97455 1692.90909 3.70 24.90 1901 1901 MS2 20/52 Linfeng_122411_rIgG_9.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 367 2.91 0.00 1 29 25 4 423.98151 1692.90420 0.81 25.70 2067 2067 MS2 31/78 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 2.91 0.00 0 28 25 3 644.39441 1931.16867 -0.12 53.31 6497 6497 MS2 29/72 Linfeng_091311_rIgG_10.raw Medium VTIAQGGVLPNIQAVLLPKKTESHHK Unambiguous 8 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 40 2.89 0.00 2 13 25 4 695.40607 2778.60244 1.24 35.01 3299 3299 MS2 41/150 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 130 2.88 0.00 2 4 25 5 427.24536 2132.19770 1.94 34.59 3247 3247 MS2 45/136 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.84 0.00 0 0 25 2 966.09174 1931.17620 3.77 49.13 5103 5103 MS2 15/36 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 393 2.82 0.00 1 9 8 4 423.98175 1692.90517 1.38 3.27 290 290 MS2 24/78 Linfeng_122411_rIgG_8.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 368 2.81 0.00 1 27 25 4 423.98245 1692.90798 3.04 24.85 2046 2046 MS2 28/78 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 2.80 0.00 1 7 25 3 687.09113 2059.25882 -2.46 41.84 5079 5079 MS2 23/76 Linfeng_091311_rIgG_10.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.79 0.00 1 14 25 4 515.57233 2059.26748 1.75 40.39 3987 3987 MS2 38/114 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.76 0.00 0 23 25 2 966.09180 1931.17632 3.83 47.10 4846 4846 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.76 0.00 0 30 87 2 472.77234 944.53740 6.48 34.57 4207 4207 MS2 14/16 Linfeng_20120125_PCAF_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 2.74 0.00 0 42 25 2 966.08551 1931.16374 -2.68 45.35 5463 5463 MS2 19/36 Linfeng_091311_rIgG_2.raw High NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 414 2.74 0.00 1 6 25 2 650.84711 1300.68694 1.01 30.36 2690 2690 MS2 18/20 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.66 0.00 0 70 25 2 966.08887 1931.17046 0.80 44.14 4967 4967 MS2 18/36 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.66 0.00 1 29 25 3 564.97375 1692.90671 2.29 26.63 2189 2189 MS2 20/52 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.64 0.00 0 49 25 2 966.09161 1931.17595 3.65 56.35 5923 5923 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 11 2.63 0.00 0 0 100 2 966.09296 1931.17864 5.04 49.95 7321 7321 MS2 17/36 Linfeng_20120125_PCAF_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 309 2.61 0.00 1 40 25 2 846.95709 1692.90691 2.41 26.01 2108 2108 MS2 14/26 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 389 2.60 0.00 1 23 2 4 423.98090 1692.90175 -0.64 3.16 286 286 MS2 28/78 Linfeng_122411_rIgG_10.raw High NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 418 2.58 0.00 1 14 25 2 650.84814 1300.68901 2.61 30.42 2609 2609 MS2 16/20 Linfeng_122411_rIgG_9.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 2.55 0.00 0 0 100 2 966.09448 1931.18169 6.62 50.03 7328 7328 MS2 17/36 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 362 2.48 0.00 1 6 4 3 564.97266 1692.90342 0.35 3.23 284 284 MS2 18/52 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw Medium VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.43 0.00 0 28 25 3 644.39642 1931.17472 3.01 45.21 4642 4642 MS2 26/72 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 843 2.40 0.00 0 36 96 2 472.77194 944.53661 5.64 34.48 4185 4185 MS2 14/16 Linfeng_20120125_PCAF_1.raw Medium NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 474 2.38 0.00 1 35 25 3 434.23380 1300.68683 0.93 31.06 2784 2784 MS2 21/40 Linfeng_122411_rIgG_10.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.37 0.00 1 13 25 3 687.09399 2059.26743 1.72 40.20 3962 3962 MS2 22/76 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 363 2.35 0.00 1 37 25 3 564.97272 1692.90360 0.45 28.17 2393 2393 MS2 18/52 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.33 0.00 1 22 25 3 564.97278 1692.90378 0.56 24.36 2219 2219 MS2 14/52 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.32 0.00 1 38 25 3 564.97388 1692.90708 2.51 48.82 5065 5065 MS2 17/52 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.31 0.00 1 17 25 3 564.97449 1692.90891 3.59 55.02 5764 5764 MS2 20/52 Linfeng_122411_rIgG_10.raw Medium NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 474 2.31 0.00 1 4 25 3 434.23392 1300.68720 1.21 30.78 2809 2809 MS2 20/40 Linfeng_122411_rIgG_8.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.23 0.00 0 12 100 2 425.76959 850.53191 7.20 23.92 1924 1924 MS2 11/12 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.18 0.00 0 0 100 2 966.09204 1931.17681 4.09 55.08 7759 7759 MS2 19/36 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 569 2.09 0.00 0 40 100 2 472.77246 944.53765 6.74 36.29 4266 4266 MS2 13/16 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 580 2.07 0.00 0 41 100 2 472.77252 944.53777 6.87 34.47 3769 3769 MS2 13/16 Linfeng_20120125_PCAF_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 608 2.05 0.00 0 20 22 2 472.77252 944.53777 6.87 34.82 4394 4394 MS2 14/16 Linfeng_20120125_PCAF_8.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.05 0.00 0 25 100 2 425.76959 850.53191 7.20 24.93 2010 2010 MS2 11/12 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 591 2.02 0.00 0 14 40 2 472.77216 944.53703 6.09 46.61 6648 6648 MS2 14/16 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00026970.4 FACT complex subunit SPT16 18.43 1 13 13 23 27.71 9.93 7 10 21.52 9.07 6 6 19.00 9.74 7 7 1047 119.8 5.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TYALFIGDTVLVDEDGPATVLTSVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 302 5.67 0.00 0 23 25 3 875.46490 2624.38016 3.62 47.55 5032 5032 MS2 36/96 Linfeng_122411_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 13 4.25 0.00 1 8 25 3 802.99945 2406.98380 -2.76 33.29 3912 3912 MS2 35/76 Linfeng_091311_rIgG_2.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 13 4.15 0.00 1 13 25 3 803.00366 2406.99643 2.49 32.43 3088 3088 MS2 34/76 Linfeng_122411_rIgG_3.raw High HTDVQFYTEVGEITTDLGK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 270 4.00 0.00 0 33 25 3 718.35052 2153.03702 -1.28 40.44 4780 4780 MS2 33/72 Linfeng_091311_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 26 3.76 0.00 1 2 100 3 803.00763 2407.00833 7.43 37.39 4027 4027 MS2 33/76 Linfeng_20120125_PCAF_2.raw High NEGNIFPNPEATFVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 299 3.23 0.00 0 10 25 2 838.91687 1676.82646 -0.88 36.16 3564 3564 MS2 22/28 Linfeng_122411_rIgG_3.raw High APGEQTVPALNLQNAFR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 285 3.10 0.00 0 5 100 2 913.48718 1825.96709 6.29 47.59 6191 6191 MS2 19/32 Linfeng_20120125_PCAF_2.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 340 3.01 0.00 0 6 25 2 713.35529 1425.70329 1.67 29.99 2771 2771 MS2 20/22 Linfeng_122411_rIgG_3.raw High NISMSVEGDYTYLR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 264 2.94 0.00 0 17 100 2 824.39319 1647.77910 6.52 42.42 4991 4991 MS2 18/26 Linfeng_20120125_PCAF_2.raw High INFYcPGSALGR Unambiguous 1 1 IPI00026970.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 2.85 0.00 0 19 25 2 677.83325 1354.65923 1.43 32.82 3138 3138 MS2 18/22 Linfeng_122411_rIgG_3.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 346 2.81 0.00 0 11 25 2 713.35260 1425.69792 -2.10 31.29 3604 3604 MS2 19/22 Linfeng_091311_rIgG_3.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 278 2.78 0.00 0 11 25 2 713.35199 1425.69670 -2.95 31.26 3641 3641 MS2 20/22 Linfeng_091311_rIgG_2.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 357 2.76 0.00 0 11 100 2 713.35901 1425.71074 6.89 34.89 3541 3541 MS2 18/22 Linfeng_20120125_PCAF_2.raw High VEALTKEELEFEVPFR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 417 2.74 0.00 1 21 25 3 646.00494 1936.00028 -3.12 38.67 4558 4558 MS2 25/60 Linfeng_091311_rIgG_3.raw High AASITSEVFNK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 339 2.62 0.00 0 36 25 2 583.80774 1166.60820 2.55 27.70 2467 2467 MS2 16/20 Linfeng_122411_rIgG_3.raw Medium APGEQTVPALNLQNAFR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 391 2.32 0.00 0 24 25 3 609.32123 1825.94913 -3.55 38.36 4518 4518 MS2 28/64 Linfeng_091311_rIgG_3.raw High INFYcPGSALGR Unambiguous 1 1 IPI00026970.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 268 2.31 0.00 0 10 100 2 677.83716 1354.66704 7.20 39.97 4518 4518 MS2 16/22 Linfeng_20120125_PCAF_2.raw High ELAAQLNEEAK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 357 2.29 0.00 0 31 25 2 608.31201 1215.61675 -4.01 24.39 2701 2701 MS2 17/20 Linfeng_091311_rIgG_2.raw High YEEEEEQSR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 28 2.25 0.00 0 4 25 2 599.74548 1198.48369 -1.84 14.75 1344 1344 MS2 15/16 Linfeng_091311_rIgG_2.raw High ELAAQLNEEAK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 362 2.16 0.00 0 10 25 2 608.31274 1215.61821 -2.80 24.46 2677 2677 MS2 18/20 Linfeng_091311_rIgG_3.raw High GDKVDILYNNIK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 386 2.12 0.00 1 46 100 2 696.38525 1391.76323 7.38 35.37 3638 3638 MS2 15/22 Linfeng_20120125_PCAF_2.raw High YEEEEEQSR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 26 2.10 0.00 0 17 25 2 599.74609 1198.48491 -0.82 14.34 1258 1258 MS2 14/16 Linfeng_091311_rIgG_3.raw High NEGNIFPNPEATFVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 325 2.02 0.00 0 45 100 2 838.92261 1676.83794 5.96 44.96 5588 5588 MS2 16/28 Linfeng_20120125_PCAF_2.raw IPI00027252.6 Prohibitin-2 30.77 2 7 7 7 20.82 30.77 7 7 0.00 0.00 299 33.3 9.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IYLTADNLVLNLQDESFTR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 369 4.57 0.00 0 23 25 3 742.38580 2225.14286 -0.93 45.72 5405 5405 MS2 31/72 Linfeng_091311_rIgG_7.raw High IGGVQQDTILAEGLHFR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 401 4.11 0.00 0 4 25 3 618.66486 1853.98001 -3.72 37.58 4382 4382 MS2 33/64 Linfeng_091311_rIgG_7.raw High IVQAEGEAEAAK Unambiguous 1 1 IPI00027252.6 CID 1.0000 0.0000 1 1 379 2.70 0.00 0 3 25 2 608.31305 1215.61882 -2.31 18.70 1848 1848 MS2 20/22 Linfeng_091311_rIgG_7.raw High IPWFQYPIIYDIR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 428 2.57 0.00 0 26 25 3 575.31061 1723.91727 -1.98 49.20 5840 5840 MS2 18/48 Linfeng_091311_rIgG_7.raw High FNASQLITQR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 433 2.55 0.00 0 34 25 2 589.31805 1177.62883 -3.07 31.99 3665 3665 MS2 16/18 Linfeng_091311_rIgG_7.raw High LLLGAGAVAYGVR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 233 2.19 0.00 0 12 25 2 630.37494 1259.74260 -3.57 35.81 4157 4157 MS2 19/24 Linfeng_091311_rIgG_7.raw High LGLDYEER Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 217 2.13 0.00 0 20 25 2 497.74442 994.48155 -2.50 27.82 3101 3101 MS2 13/14 Linfeng_091311_rIgG_7.raw IPI00027569.1 Heterogeneous nuclear ribonucleoprotein C-like 1 23.89 3 1 13 53 67.46 20.48 8 24 55.38 23.21 12 21 18.81 16.38 4 8 293 32.1 5.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 434 3.88 0.00 0 11 2 3 566.97308 1698.90470 -2.87 37.11 4335 4335 MS2 29/60 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.73 0.00 1 10 25 3 367.54764 1100.62836 -2.45 22.68 2398 2398 MS2 23/36 Linfeng_091311_rIgG_7.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.44 0.00 1 11 25 3 367.54770 1100.62854 -2.29 22.55 2408 2408 MS2 21/36 Linfeng_091311_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 401 3.43 0.00 0 31 12 3 566.97510 1698.91074 0.68 35.97 3731 3731 MS2 28/60 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 440 3.41 0.00 1 4 21 3 472.59454 1415.76908 -3.55 33.01 3808 3808 MS2 20/44 Linfeng_091311_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 406 3.37 0.00 0 18 12 3 566.97241 1698.90268 -4.06 37.17 4330 4330 MS2 30/60 Linfeng_091311_rIgG_7.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 461 3.33 0.00 1 5 18 3 472.59631 1415.77439 0.20 32.08 3243 3243 MS2 22/44 Linfeng_122411_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 19 25 3 566.97491 1698.91019 0.36 34.70 3005 3005 MS2 28/60 Linfeng_122411_rIgG_7.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 3.18 0.00 1 9 25 3 472.59464 1415.76935 -3.35 33.13 3814 3814 MS2 20/44 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 129 3.05 0.00 0 5 22 3 439.60141 1316.78968 -3.06 38.56 4519 4519 MS2 27/44 Linfeng_091311_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 412 3.00 0.00 0 51 100 3 566.97815 1698.91989 6.07 44.82 6220 6220 MS2 24/60 Linfeng_20120125_PCAF_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 379 2.95 0.00 1 7 15 3 375.20358 1123.59620 -2.87 27.85 3126 3126 MS2 23/36 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 2.93 0.00 1 76 25 3 367.54758 1100.62818 -2.62 22.64 2459 2459 MS2 19/36 Linfeng_091311_rIgG_8.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 95 2.93 0.00 0 1 25 3 439.60367 1316.79645 2.08 37.44 3915 3915 MS2 29/44 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.91 0.00 1 21 25 3 472.59464 1415.76935 -3.35 33.17 3882 3882 MS2 16/44 Linfeng_091311_rIgG_8.raw High VDSLLENLEKIEKEQSK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 361 2.88 0.00 2 5 25 3 668.02954 2002.07407 1.85 37.68 3945 3945 MS2 26/64 Linfeng_122411_rIgG_6.raw High KSDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 474 2.82 0.00 2 8 25 3 491.26559 1471.78223 2.07 28.87 2824 2824 MS2 30/48 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 362 2.81 0.00 1 10 25 3 375.20529 1123.60132 1.69 26.16 2462 2462 MS2 25/36 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.78 0.00 0 3 3 2 658.90326 1316.79924 4.20 48.52 7131 7131 MS2 20/22 Linfeng_20120125_PCAF_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 99 2.75 0.00 0 14 25 2 658.90125 1316.79521 1.14 36.95 3288 3288 MS2 20/22 Linfeng_122411_rIgG_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 520 2.75 0.00 0 7 25 2 580.31030 1159.61333 -6.23 35.55 4135 4135 MS2 16/18 Linfeng_091311_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 2.72 0.00 0 21 25 2 430.22852 859.44975 -2.64 22.63 2418 2418 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.70 0.00 0 4 2 2 658.89856 1316.78984 -2.94 38.55 4517 4517 MS2 20/22 Linfeng_091311_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 573 2.69 0.00 0 13 25 2 580.31134 1159.61540 -4.44 35.61 4132 4132 MS2 16/18 Linfeng_091311_rIgG_7.raw Medium QKVDSLLENLEKIEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 290 2.64 0.00 2 8 25 4 447.25504 1785.99831 1.44 35.77 3706 3706 MS2 29/84 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.63 0.00 0 3 6 2 658.89728 1316.78728 -4.88 38.61 4510 4510 MS2 20/22 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.62 0.00 0 8 25 2 658.90186 1316.79643 2.07 37.62 3938 3938 MS2 19/22 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 386 2.62 0.00 0 21 25 2 430.22986 859.45244 0.49 4.62 516 516 MS2 13/14 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 373 2.61 0.00 1 8 25 3 375.20346 1123.59583 -3.20 27.91 3113 3113 MS2 22/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 92 2.61 0.00 0 16 25 2 658.90222 1316.79717 2.62 37.46 3611 3611 MS2 18/22 Linfeng_122411_rIgG_10.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 578 2.60 0.00 0 32 25 2 580.31506 1159.62285 1.98 31.39 2588 2588 MS2 16/18 Linfeng_122411_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 328 2.51 0.00 1 7 10 2 562.30157 1123.59587 -3.16 27.85 3125 3125 MS2 14/18 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 80 2.49 0.00 0 27 25 2 658.90295 1316.79863 3.74 54.28 5899 5899 MS2 14/22 Linfeng_122411_rIgG_6.raw High SDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 345 2.49 0.00 1 26 25 2 672.34662 1343.68596 1.30 31.82 3209 3209 MS2 18/22 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 8 25 2 658.89819 1316.78911 -3.49 38.59 4664 4664 MS2 18/22 Linfeng_091311_rIgG_10.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 387 2.47 0.00 0 31 21 2 849.95563 1698.90398 -3.30 37.01 4322 4322 MS2 15/30 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 358 2.46 0.00 1 1 60 2 562.30707 1123.60686 6.62 29.82 2781 2781 MS2 14/18 Linfeng_20120125_PCAF_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.36 0.00 0 8 25 2 658.89771 1316.78813 -4.24 38.64 4517 4517 MS2 19/22 Linfeng_091311_rIgG_9.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 367 2.34 0.00 0 24 9 2 849.95471 1698.90215 -4.38 37.05 4315 4315 MS2 16/30 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVKK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 35 2.27 0.00 1 11 25 2 722.94958 1444.89189 2.22 33.29 3398 3398 MS2 15/24 Linfeng_122411_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 404 2.26 0.00 0 3 14 2 849.95953 1698.91179 1.30 35.96 3730 3730 MS2 17/30 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.24 0.00 0 59 25 2 430.22852 859.44975 -2.64 22.71 2402 2402 MS2 13/14 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.23 0.00 0 36 25 2 658.90192 1316.79656 2.16 37.27 3730 3730 MS2 16/22 Linfeng_122411_rIgG_2.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 549 2.21 0.00 0 20 100 2 580.31537 1159.62346 2.51 43.43 5879 5879 MS2 13/18 Linfeng_20120125_PCAF_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 276 2.20 0.00 0 4 13 2 498.25635 995.50542 0.97 30.15 2993 2993 MS2 15/16 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 523 2.17 0.00 0 39 100 2 580.31744 1159.62761 6.09 43.07 5299 5299 MS2 13/18 Linfeng_20120125_PCAF_7.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 354 2.12 0.00 0 11 23 2 849.96399 1698.92070 6.55 45.26 6328 6328 MS2 16/30 Linfeng_20120125_PCAF_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 331 2.12 0.00 1 14 25 2 562.30176 1123.59624 -2.83 27.81 3099 3099 MS2 13/18 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 88 2.09 0.00 0 48 25 2 658.90179 1316.79631 1.98 48.18 5259 5259 MS2 14/22 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 355 2.08 0.00 1 11 9 2 562.30353 1123.59978 0.32 26.25 2474 2474 MS2 14/18 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 537 2.06 0.00 0 27 100 2 580.31769 1159.62810 6.51 42.40 5629 5629 MS2 11/18 Linfeng_20120125_PCAF_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 300 2.01 0.00 0 2 22 2 498.25476 995.50224 -2.22 31.60 3612 3612 MS2 13/16 Linfeng_091311_rIgG_7.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 366 2.00 0.00 0 22 17 2 849.96460 1698.92192 7.26 44.94 6251 6251 MS2 16/30 Linfeng_20120125_PCAF_6.raw IPI00027834.3 Heterogeneous nuclear ribonucleoprotein L 52.97 6 19 19 60 59.97 34.47 12 18 44.21 23.94 9 12 121.19 32.43 8 30 589 64.1 8.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QALVEFEDVLGAcNAVNYAADNQIYIAGHPAFVNYSTSQK Unambiguous 3 1 IPI00027834.3 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 7.09 0.00 0 3 25 4 1097.77820 4388.09096 -0.46 45.97 5470 5470 MS2 62/234 Linfeng_091311_rIgG_4.raw High LNVFKNDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 110 6.21 0.00 2 2 25 4 873.66400 3491.63418 3.72 31.81 3152 3152 MS2 45/180 Linfeng_122411_rIgG_4.raw High YGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 205 6.00 0.00 0 29 100 4 946.96411 3784.83462 6.35 48.15 6822 6822 MS2 54/204 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 65 5.61 0.00 1 0 25 3 964.09583 2890.27292 3.64 27.69 2609 2609 MS2 35/100 Linfeng_122411_rIgG_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 62 5.46 0.00 1 16 100 5 808.57184 4038.83009 5.96 26.03 1920 1920 MS2 69/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 59 5.41 0.00 1 42 100 5 808.57159 4038.82886 5.66 26.28 1958 1958 MS2 71/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 61 5.35 0.00 1 0 100 5 808.57233 4038.83253 6.56 26.39 1978 1978 MS2 73/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 11 5.32 0.00 0 1 22 4 746.05591 2981.20180 -0.30 16.39 1538 1538 MS2 53/204 Linfeng_091311_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 56 5.29 0.00 1 0 25 3 964.09106 2890.25864 -1.30 28.96 3288 3288 MS2 34/100 Linfeng_091311_rIgG_4.raw High YGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 205 5.02 0.00 0 1 100 4 946.96411 3784.83462 6.35 48.26 6847 6847 MS2 49/204 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 74 5.02 0.00 1 2 100 3 964.09967 2890.28446 7.63 31.07 2848 2848 MS2 35/100 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 13 4.96 0.00 0 0 25 4 746.05652 2981.20424 0.51 16.56 1526 1526 MS2 42/204 Linfeng_091311_rIgG_5.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 61 4.92 0.00 1 2 100 5 808.57178 4038.82978 5.88 26.41 1982 1982 MS2 73/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 62 4.87 0.00 1 0 100 5 808.57190 4038.83039 6.03 26.30 1962 1962 MS2 72/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 61 4.83 0.00 1 3 100 5 808.57220 4038.83192 6.41 26.52 2004 2004 MS2 73/352 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 70 4.76 0.00 1 0 100 3 964.09863 2890.28135 6.56 31.20 2875 2875 MS2 30/100 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 74 4.54 0.00 1 10 100 3 964.09961 2890.28427 7.57 31.29 2894 2894 MS2 34/100 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 74 4.29 0.00 1 6 100 3 964.09973 2890.28464 7.70 30.15 2666 2666 MS2 35/100 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 61 4.18 0.00 1 4 100 5 808.57220 4038.83192 6.41 26.22 1950 1950 MS2 72/352 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 67 4.12 0.00 1 9 100 3 964.09705 2890.27658 4.91 30.27 3253 3253 MS2 31/100 Linfeng_20120125_PCAF_5.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 70 4.11 0.00 1 0 100 3 964.09735 2890.27750 5.23 30.33 3266 3266 MS2 31/100 Linfeng_20120125_PCAF_5.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 4.10 0.00 0 6 25 3 530.26715 1588.78690 2.53 41.90 4426 4426 MS2 28/48 Linfeng_122411_rIgG_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 4.08 0.00 0 5 25 2 794.89777 1588.78826 3.38 41.89 4425 4425 MS2 21/24 Linfeng_122411_rIgG_4.raw High NGVQAMVEFDSVQSAQR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 256 4.07 0.00 0 17 100 2 933.45166 1865.89604 7.99 40.26 4943 4943 MS2 21/32 Linfeng_20120125_PCAF_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 4.00 0.00 0 1 25 2 865.39551 1729.78374 -2.72 30.30 3468 3468 MS2 20/30 Linfeng_091311_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 65 3.93 0.00 1 9 100 3 964.09546 2890.27182 3.26 30.09 3209 3209 MS2 30/100 Linfeng_20120125_PCAF_5.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 3.87 0.00 0 8 17 2 794.89398 1588.78069 -1.38 43.19 5122 5122 MS2 21/24 Linfeng_091311_rIgG_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 57 3.80 0.00 1 2 100 5 808.57129 4038.82734 5.28 26.11 1932 1932 MS2 71/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 57 3.79 0.00 1 19 100 5 808.57147 4038.82825 5.50 26.76 2043 2043 MS2 63/352 Linfeng_20120125_PCAF_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 14 3.64 0.00 0 16 25 4 746.05902 2981.21425 3.87 15.36 1254 1254 MS2 44/204 Linfeng_122411_rIgG_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 3.58 0.00 0 2 25 2 865.39862 1729.78996 0.88 28.93 2775 2775 MS2 22/30 Linfeng_122411_rIgG_4.raw High NGVQAMVEFDSVQSAQR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 235 3.56 0.00 0 20 100 2 933.45062 1865.89397 6.88 40.41 4979 4979 MS2 21/32 Linfeng_20120125_PCAF_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 65 3.53 0.00 1 13 25 4 723.32336 2890.27163 3.20 27.78 2621 2621 MS2 40/150 Linfeng_122411_rIgG_4.raw High SKPGAAMVEMADGYAVDR Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 216 3.45 0.00 0 21 100 3 623.29865 1867.88138 7.27 41.16 5154 5154 MS2 26/68 Linfeng_20120125_PCAF_4.raw High AITHLNNNFMFGQK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 369 3.37 0.00 0 20 100 3 545.61218 1634.82199 6.82 40.96 5106 5106 MS2 24/52 Linfeng_20120125_PCAF_4.raw High NGVQAMVEFDSVQSAQR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 252 3.35 0.00 0 65 100 2 933.45270 1865.89812 9.10 40.50 5000 5000 MS2 19/32 Linfeng_20120125_PCAF_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 3.20 0.00 0 3 25 3 530.26471 1588.77958 -2.08 43.24 5129 5129 MS2 25/48 Linfeng_091311_rIgG_4.raw High AITHLNNNFMFGQK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 384 3.19 0.00 0 9 25 3 545.60931 1634.81339 1.56 30.26 2949 2949 MS2 24/52 Linfeng_122411_rIgG_4.raw High TPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 341 3.09 0.00 0 21 25 3 359.54318 1076.61499 -5.72 22.00 2327 2327 MS2 22/36 Linfeng_091311_rIgG_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 156 3.08 0.00 0 34 25 3 577.26770 1729.78855 0.06 28.99 2783 2783 MS2 30/60 Linfeng_122411_rIgG_4.raw High QPAIMPGQSYGLEDGScSYK Unambiguous 5 1 IPI00027834.3 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 106 3.01 0.00 0 21 100 2 1094.49561 2187.98393 7.00 35.34 3813 3813 MS2 19/38 Linfeng_20120125_PCAF_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 178 2.99 0.00 0 17 100 2 865.40308 1729.79888 6.03 32.41 3133 3133 MS2 18/30 Linfeng_20120125_PCAF_4.raw High AITHLNNNFMFGQK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 388 2.83 0.00 0 33 100 3 545.61194 1634.82126 6.37 41.34 5197 5197 MS2 22/52 Linfeng_20120125_PCAF_4.raw High TPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 285 2.81 0.00 0 51 25 3 359.54425 1076.61820 -2.74 22.20 2313 2313 MS2 19/36 Linfeng_091311_rIgG_5.raw High QPAIMPGQSYGLEDGScSYK Unambiguous 5 1 IPI00027834.3 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 115 2.76 0.00 0 9 100 2 1094.49768 2187.98808 8.90 35.63 3882 3882 MS2 16/38 Linfeng_20120125_PCAF_4.raw High SKPGAAMVEMADGYAVDR Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 234 2.59 0.00 0 21 100 3 623.29901 1867.88248 7.85 41.99 5348 5348 MS2 26/68 Linfeng_20120125_PCAF_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 321 2.56 0.00 0 35 25 2 611.80237 1222.59746 1.96 31.52 3115 3115 MS2 16/20 Linfeng_122411_rIgG_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 265 2.53 0.00 0 33 25 2 611.79926 1222.59123 -3.13 32.90 3810 3810 MS2 16/20 Linfeng_091311_rIgG_4.raw High LcFSTAQHAS Unambiguous 2 1 IPI00027834.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 141 2.51 0.00 0 8 3 2 561.25519 1121.50310 -1.21 4.01 447 447 MS2 16/18 Linfeng_122411_rIgG_4.raw High SKPGAAMVEMADGYAVDR Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 203 2.49 0.00 0 30 100 2 934.44373 1867.88017 6.62 41.38 5206 5206 MS2 17/34 Linfeng_20120125_PCAF_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 273 2.49 0.00 0 27 25 2 611.79938 1222.59148 -2.93 33.20 3823 3823 MS2 16/20 Linfeng_091311_rIgG_7.raw High SKPGAAMVEMADGYAVDR Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 219 2.35 0.00 0 16 100 2 934.44476 1867.88225 7.73 41.61 5259 5259 MS2 18/34 Linfeng_20120125_PCAF_4.raw High LcFSTAQHAS Unambiguous 2 1 IPI00027834.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 144 2.34 0.00 0 29 25 2 561.25378 1121.50029 -3.71 24.23 2638 2638 MS2 16/18 Linfeng_091311_rIgG_4.raw Medium TPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 341 2.31 0.00 0 61 25 3 359.54340 1076.61563 -5.12 22.42 2363 2363 MS2 18/36 Linfeng_091311_rIgG_7.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 319 2.23 0.00 0 4 24 2 632.32019 1263.63310 -2.96 27.90 3143 3143 MS2 15/20 Linfeng_091311_rIgG_4.raw High ISRPGDSDDSR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 143 2.17 0.00 0 28 25 2 602.78119 1204.55510 -0.19 13.96 1195 1195 MS2 14/20 Linfeng_091311_rIgG_4.raw High MAAAGGGGGGGR Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 122 2.14 0.00 0 17 25 2 459.71408 918.42088 -0.25 2.31 192 192 MS2 15/22 Linfeng_091311_rIgG_4.raw High IEYAKPTR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 393 2.14 0.00 0 62 25 2 489.27243 977.53758 -4.00 16.53 1558 1558 MS2 12/14 Linfeng_091311_rIgG_4.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 367 2.12 0.00 0 33 25 2 632.32306 1263.63884 1.58 25.10 2264 2264 MS2 13/20 Linfeng_122411_rIgG_4.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 341 2.00 0.00 0 39 25 2 632.32025 1263.63323 -2.86 28.23 3157 3157 MS2 12/20 Linfeng_091311_rIgG_7.raw IPI00028064.1 Cathepsin G 18.82 1 3 3 3 7.66 18.82 3 3 255 28.8 11.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AQEGLRPGTLcTVAGWGR Unambiguous 1 1 IPI00028064.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 3.22 0.00 0 34 25 3 643.66144 1928.96976 -3.26 32.65 3890 3890 MS2 34/68 Linfeng_091311_rIgG_10.raw Medium GDSGGPLLcNNVAHGIVSYGK Unambiguous 1 1 IPI00028064.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 266 2.31 0.00 0 22 25 3 705.67902 2115.02250 -3.01 32.89 3921 3921 MS2 29/80 Linfeng_091311_rIgG_10.raw High VSSFLPWIR Unambiguous 1 1 IPI00028064.1 CID 1.0000 0.0000 1 1 353 2.13 0.00 0 15 25 2 552.81226 1104.61724 -2.59 42.94 5218 5218 MS2 13/16 Linfeng_091311_rIgG_10.raw IPI00028955.4 Ribosome biogenesis protein BOP1 21.98 3 11 11 19 33.12 18.50 10 12 24.83 12.33 5 7 0.00 746 83.6 6.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLGVLDVIFHPTQPWVFSSGADGTVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 299 6.43 0.00 0 19 25 3 938.48340 2813.43564 3.48 52.34 5632 5632 MS2 43/100 Linfeng_122411_rIgG_3.raw High LALPGHAESYNPPPEYLLSEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 257 3.86 0.00 0 4 25 3 871.09125 2611.25919 -3.21 35.59 4166 4166 MS2 35/88 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 269 3.64 0.00 0 18 25 3 878.13629 2632.39432 -1.49 44.90 5340 5340 MS2 24/96 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 225 3.60 0.00 0 6 25 3 878.14050 2632.40696 3.31 43.88 4560 4560 MS2 29/96 Linfeng_122411_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 618 3.29 0.00 0 45 25 2 572.32275 1143.63823 1.19 24.86 2231 2231 MS2 17/18 Linfeng_122411_rIgG_4.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 520 3.13 0.00 0 13 25 2 572.32056 1143.63384 -2.65 27.74 3128 3128 MS2 17/18 Linfeng_091311_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 545 3.13 0.00 0 18 25 2 572.32349 1143.63970 2.47 22.94 1857 1857 MS2 15/18 Linfeng_122411_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 537 3.02 0.00 0 26 25 2 572.32367 1143.64006 2.79 23.94 1972 1972 MS2 17/18 Linfeng_122411_rIgG_3.raw High LALPGHAESYNPPPEYLLSEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 259 2.89 0.00 0 9 25 3 871.09552 2611.27201 1.70 34.85 3397 3397 MS2 29/88 Linfeng_122411_rIgG_3.raw High TRDELDQFLDK Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 325 2.84 0.00 1 4 25 3 460.56393 1379.67725 -2.14 32.94 3824 3824 MS2 22/40 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 275 2.77 0.00 0 22 25 3 878.13611 2632.39377 -1.69 45.22 5376 5376 MS2 21/96 Linfeng_091311_rIgG_4.raw Medium VAFHPARPFLLVASQR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 161 2.66 0.00 0 11 25 4 453.01151 1809.02419 -2.28 32.58 3776 3776 MS2 29/90 Linfeng_091311_rIgG_3.raw High TTEEQVQASTPcPR Unambiguous 1 1 IPI00028955.4 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 2.63 0.00 0 17 25 2 802.37115 1603.73503 -1.93 21.30 2236 2236 MS2 18/26 Linfeng_091311_rIgG_3.raw High LAWEQQEPGER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 226 2.53 0.00 0 24 25 2 671.82196 1342.63664 -1.51 26.85 3007 3007 MS2 17/20 Linfeng_091311_rIgG_3.raw High LWEVATAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 813 2.47 0.00 0 20 25 2 473.26227 945.51726 2.08 26.74 2341 2341 MS2 13/14 Linfeng_122411_rIgG_3.raw High VNVDPEDLIPK Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 311 2.42 0.00 0 28 25 2 619.83319 1238.65911 -2.95 37.11 4360 4360 MS2 16/20 Linfeng_091311_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 554 2.31 0.00 0 31 25 2 572.32074 1143.63420 -2.33 27.87 3139 3139 MS2 16/18 Linfeng_091311_rIgG_4.raw High WLEASEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 139 2.21 0.00 0 23 25 2 574.76215 1148.51702 -4.25 25.31 2795 2795 MS2 13/16 Linfeng_091311_rIgG_3.raw High LWEVATAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 486 2.11 0.00 0 22 25 2 473.26007 945.51286 -2.57 29.15 3320 3320 MS2 12/14 Linfeng_091311_rIgG_3.raw IPI00031554.1 ATP-dependent RNA helicase DDX50 13.03 1 5 7 11 20.14 10.99 6 7 13.29 6.51 3 4 0.00 737 82.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 350 4.85 0.00 0 17 25 3 704.36774 2111.08866 0.26 49.56 5925 5925 MS2 43/84 Linfeng_091311_rIgG_3.raw High GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 330 4.67 0.00 0 11 25 3 704.36993 2111.09525 3.38 48.44 5145 5145 MS2 36/84 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 255 3.55 0.00 0 5 25 2 834.90900 1668.81072 -0.54 36.17 3565 3565 MS2 20/28 Linfeng_122411_rIgG_3.raw High QNAQcLHGDIAQSQR Unambiguous 1 1 IPI00031554.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 184 3.04 0.00 0 29 25 3 575.93933 1725.80344 -2.99 19.07 1927 1927 MS2 21/56 Linfeng_091311_rIgG_3.raw Medium GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 374 2.93 0.00 0 25 25 4 528.52649 2111.08413 -1.89 49.58 5928 5928 MS2 36/126 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 290 2.73 0.00 0 29 25 2 834.91187 1668.81645 2.90 36.25 3717 3717 MS2 17/28 Linfeng_122411_rIgG_4.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 311 2.47 0.00 0 22 25 2 606.33905 1211.67082 -2.89 34.77 4058 4058 MS2 17/22 Linfeng_091311_rIgG_3.raw High TFSFAIPLIER Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 326 2.41 0.00 0 3 25 2 647.36249 1293.71770 -1.94 44.67 5310 5310 MS2 16/20 Linfeng_091311_rIgG_3.raw High TFSFAIPLIER Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 271 2.34 0.00 0 16 25 2 647.36572 1293.72417 3.06 43.27 4598 4598 MS2 15/20 Linfeng_122411_rIgG_4.raw High SRYEQVDLVGK Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 425 2.32 0.00 1 26 25 2 647.34033 1293.67339 -4.95 24.09 2625 2625 MS2 16/20 Linfeng_091311_rIgG_3.raw High VLVATNVAAR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 266 2.13 0.00 0 36 25 2 507.30719 1013.60710 -3.12 24.17 2636 2636 MS2 17/18 Linfeng_091311_rIgG_3.raw IPI00032003.1 Emerin 27.56 2 6 6 14 22.88 27.56 6 8 15.73 19.29 3 6 254 29.0 5.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GYNDDYYEESYFTTR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 19 3.62 0.00 0 14 100 2 961.89667 1922.78606 7.54 38.49 4244 4244 MS2 22/28 Linfeng_20120125_PCAF_7.raw High GYNDDYYEESYFTTR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 5 3.48 0.00 0 3 25 2 961.88727 1922.76726 -2.23 34.68 4012 4012 MS2 21/28 Linfeng_091311_rIgG_7.raw High LSPPSSSAASSYSFSDLNSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 172 3.48 0.00 0 7 25 3 721.00409 2160.99771 -3.12 33.03 3800 3800 MS2 32/80 Linfeng_091311_rIgG_7.raw High YNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 406 2.96 0.00 0 7 25 3 466.24658 1396.72519 -5.75 26.47 2916 2916 MS2 26/48 Linfeng_091311_rIgG_7.raw High APGAGLGQDR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 230 2.91 0.00 0 7 25 2 471.24277 941.47826 -1.83 17.78 1719 1719 MS2 15/18 Linfeng_091311_rIgG_7.raw High RYNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 393 2.84 0.00 1 45 25 3 518.28082 1552.82792 -4.14 23.72 2543 2543 MS2 24/52 Linfeng_091311_rIgG_7.raw High GYNDDYYEESYFTTR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 14 2.79 0.00 0 4 100 2 961.89703 1922.78679 7.93 38.52 4250 4250 MS2 18/28 Linfeng_20120125_PCAF_7.raw High KEDALLYQSK Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 424 2.66 0.00 1 23 25 3 398.88171 1194.63059 -4.97 22.17 2328 2328 MS2 19/36 Linfeng_091311_rIgG_7.raw High LSPPSSSAASSYSFSDLNSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 160 2.58 0.00 0 11 100 2 1081.01440 2161.02153 7.90 36.26 3755 3755 MS2 22/40 Linfeng_20120125_PCAF_7.raw High KEDALLYQSK Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 422 2.53 0.00 1 23 25 2 597.81848 1194.62969 -5.72 22.19 2331 2331 MS2 16/18 Linfeng_091311_rIgG_7.raw Medium YNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 388 2.42 0.00 0 17 100 3 466.25171 1396.74057 5.26 27.76 2152 2152 MS2 19/48 Linfeng_20120125_PCAF_7.raw Medium LSPPSSSAASSYSFSDLNSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 223 2.31 0.00 0 4 100 3 721.01093 2161.01822 6.37 36.46 3793 3793 MS2 27/80 Linfeng_20120125_PCAF_7.raw High APGAGLGQDR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 278 2.03 0.00 0 49 25 2 471.24225 941.47722 -2.93 17.84 1786 1786 MS2 11/18 Linfeng_091311_rIgG_8.raw High YNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 309 2.01 0.00 0 19 100 2 698.87537 1396.74346 7.33 28.05 2200 2200 MS2 17/24 Linfeng_20120125_PCAF_7.raw IPI00032374.4 Isoform 2 of Ribosomal RNA processing protein 1 homolog B 9.86 2 5 5 6 7.32 5.14 3 3 8.46 6.22 3 3 740 82.1 9.80 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFcVEEEDSESSLQK Unambiguous 2 1 IPI00032374.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 105 3.39 0.00 0 6 25 2 893.39880 1785.79033 3.09 26.42 2298 2298 MS2 19/28 Linfeng_122411_rIgG_3.raw High VGDGDLSAEEIPENEVSLRR Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 353 3.07 0.00 1 3 25 3 729.03052 2185.07700 1.72 30.02 2775 2775 MS2 27/76 Linfeng_122411_rIgG_3.raw High TPTSSPASSPLVAK Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 366 2.85 0.00 0 6 25 2 671.86279 1342.71831 -2.25 23.11 2487 2487 MS2 20/26 Linfeng_091311_rIgG_3.raw Medium FHFIDIYLDELSK Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 384 2.42 0.00 0 5 25 3 547.28259 1639.83323 -2.11 44.50 5289 5289 MS2 24/48 Linfeng_091311_rIgG_3.raw High SILVSPTGPSR Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 412 2.05 0.00 0 15 25 2 557.31335 1113.61943 -6.17 26.56 2967 2967 MS2 14/20 Linfeng_091311_rIgG_3.raw High SILVSPTGPSR Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 335 2.00 0.00 0 14 15 2 557.31561 1113.62395 -2.11 4.34 479 479 MS2 11/20 Linfeng_122411_rIgG_3.raw IPI00041325.1 H/ACA ribonucleoprotein complex subunit 2 31.37 4 4 4 4 14.77 31.37 4 4 153 17.2 8.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IKADPDGPEAQAEAcSGER Unambiguous 4 1 IPI00041325.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 4.85 0.00 1 10 25 3 667.63599 2000.89341 -2.26 21.97 2293 2293 MS2 35/72 Linfeng_091311_rIgG_9.raw High TYQELLVNQNPIAQPLASR Unambiguous 4 1 IPI00041325.1 CID 1.0000 0.0000 1 1 345 4.64 0.00 0 12 22 3 719.05377 2155.14676 -1.81 37.57 4378 4378 MS2 34/72 Linfeng_091311_rIgG_9.raw High ADPDGPEAQAEAcSGER Unambiguous 4 1 IPI00041325.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 12 3.12 0.00 0 27 25 2 880.36096 1759.71465 -2.41 21.87 2280 2280 MS2 23/32 Linfeng_091311_rIgG_9.raw High TDLGAAAGSK Unambiguous 1 1 IPI00041325.1 CID 1.0000 0.0000 1 1 514 2.15 0.00 0 45 25 2 445.73203 890.45677 -1.20 16.82 1563 1563 MS2 17/18 Linfeng_091311_rIgG_9.raw IPI00045498.4 Isoform 3 of Heterogeneous nuclear ribonucleoprotein D-like 27.87 4 5 8 28 17.53 20.90 4 6 24.80 24.18 6 9 30.53 16.80 3 13 244 27.2 8.65 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RGFcFITYTDEEPVKK Unambiguous 3 1 IPI00045498.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 312 4.52 0.00 2 14 25 3 663.99359 1989.96622 -3.89 31.49 3597 3597 MS2 30/60 Linfeng_091311_rIgG_7.raw High FGEVVDcTIKTDPVTGR Unambiguous 3 1 IPI00045498.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 3.89 0.00 1 10 25 3 631.98529 1893.94132 1.97 29.46 2902 2902 MS2 29/64 Linfeng_122411_rIgG_6.raw High RGFcFITYTDEEPVKK Unambiguous 3 1 IPI00045498.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 3.55 0.00 2 12 25 3 663.99762 1989.97831 2.19 30.51 3040 3040 MS2 23/60 Linfeng_122411_rIgG_6.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 375 3.41 0.00 0 3 25 2 853.43365 1705.86003 -2.55 32.53 3735 3735 MS2 25/30 Linfeng_091311_rIgG_7.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 394 3.06 0.00 0 6 25 2 853.43689 1705.86650 1.24 31.31 3144 3144 MS2 23/30 Linfeng_122411_rIgG_6.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 396 2.79 0.00 0 10 100 2 853.44153 1705.87578 6.68 36.27 3756 3756 MS2 18/30 Linfeng_20120125_PCAF_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 250 2.77 0.00 0 8 25 2 584.28802 1167.56877 -2.33 28.92 3252 3252 MS2 16/18 Linfeng_091311_rIgG_7.raw High GFcFITYTDEEPVKK Unambiguous 3 1 IPI00045498.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 2.69 0.00 1 9 100 2 917.44604 1833.88481 6.53 43.12 5802 5802 MS2 19/28 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 277 2.53 0.00 0 15 25 2 584.28796 1167.56865 -2.44 29.62 3362 3362 MS2 16/18 Linfeng_091311_rIgG_6.raw High SRGFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 475 2.50 0.00 1 10 25 3 386.55405 1157.64759 0.81 36.54 3804 3804 MS2 21/36 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 280 2.49 0.00 0 2 88 2 584.29364 1167.58000 7.29 28.81 2608 2608 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 324 2.42 0.00 0 1 90 2 584.29327 1167.57927 6.66 28.85 2617 2617 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 298 2.42 0.00 0 1 100 2 584.29340 1167.57952 6.87 28.04 2481 2481 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 279 2.40 0.00 0 2 100 2 584.29358 1167.57988 7.18 28.50 2560 2560 MS2 16/18 Linfeng_20120125_PCAF_6.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 387 2.30 0.00 0 38 100 2 853.44165 1705.87602 6.82 35.92 4111 4111 MS2 24/30 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 275 2.28 0.00 0 19 25 2 584.28815 1167.56902 -2.12 29.66 3316 3316 MS2 16/18 Linfeng_091311_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 307 2.25 0.00 0 22 100 2 584.29340 1167.57952 6.87 30.48 3303 3303 MS2 15/18 Linfeng_20120125_PCAF_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 318 2.24 0.00 0 6 100 2 584.29333 1167.57939 6.76 28.01 2475 2475 MS2 15/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 276 2.24 0.00 0 2 100 2 584.29254 1167.57781 5.41 28.17 2503 2503 MS2 15/18 Linfeng_20120125_PCAF_6.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 500 2.18 0.00 0 1 5 2 457.76004 914.51280 -0.76 41.28 4584 4584 MS2 13/14 Linfeng_122411_rIgG_5.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 3 25 2 457.76132 914.51537 2.04 41.26 4391 4391 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 308 2.16 0.00 0 25 100 2 584.29364 1167.58000 7.29 30.87 2982 2982 MS2 15/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 290 2.09 0.00 0 4 100 2 584.29272 1167.57817 5.72 29.35 2398 2398 MS2 14/18 Linfeng_20120125_PCAF_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 293 2.02 0.00 0 9 100 2 584.29358 1167.57988 7.18 29.86 2789 2789 MS2 15/18 Linfeng_20120125_PCAF_6.raw High KDLTEYLSR Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 315 2.01 0.00 1 37 25 2 562.79926 1124.59123 -3.04 28.77 3231 3231 MS2 11/16 Linfeng_091311_rIgG_7.raw IPI00061200.5 "Keratin, type II cytoskeletal 71" 15.30 3 2 9 77 54.23 8.99 5 19 70.04 7.84 5 26 96.53 6.31 3 32 523 57.3 6.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.86 0.00 0 22 25 2 738.88586 1476.76445 -3.31 28.46 3190 3190 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.73 0.00 0 41 25 2 738.88519 1476.76311 -4.22 28.32 3190 3190 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.71 0.00 0 24 25 2 738.88623 1476.76518 -2.81 28.18 3182 3182 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 406 3.67 0.00 0 61 100 2 738.89166 1476.77605 4.54 28.98 2459 2459 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.64 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.21 3229 3229 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.56 0.00 0 59 100 2 738.89111 1476.77495 3.80 28.85 2618 2618 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.55 0.00 0 49 50 2 738.89130 1476.77532 4.05 28.86 2826 2826 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.52 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.30 2931 2931 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.50 0.00 0 35 25 2 738.88617 1476.76506 -2.90 28.43 3152 3152 MS2 20/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.50 0.00 0 61 100 2 738.89117 1476.77507 3.88 27.60 2631 2631 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.49 0.00 0 30 25 2 738.88593 1476.76457 -3.23 28.38 3177 3177 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 423 3.41 0.00 0 31 100 2 738.89325 1476.77922 6.69 28.23 2527 2527 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 425 3.40 0.00 0 52 100 2 738.89252 1476.77776 5.70 28.45 2265 2265 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.37 0.00 0 34 25 2 738.88947 1476.77165 1.57 24.07 2225 2225 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 402 3.36 0.00 0 38 100 2 738.89246 1476.77764 5.62 29.50 2738 2738 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 416 3.36 0.00 0 45 100 2 738.89203 1476.77678 5.04 28.13 2507 2507 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 404 3.34 0.00 0 53 100 2 738.89142 1476.77556 4.21 28.29 2241 2241 MS2 19/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 455 3.32 0.00 0 7 25 2 738.88947 1476.77165 1.57 23.02 2088 2088 MS2 18/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.32 0.00 0 13 100 2 738.89355 1476.77983 7.10 29.23 2695 2695 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 430 3.26 0.00 0 37 100 2 738.89191 1476.77654 4.87 29.41 2406 2406 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 445 3.25 0.00 0 13 25 2 738.88959 1476.77190 1.73 27.08 2585 2585 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 3.24 0.00 0 36 100 2 738.89313 1476.77898 6.53 29.48 2718 2718 MS2 19/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.18 0.00 0 14 25 2 738.89020 1476.77312 2.56 25.27 2170 2170 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.15 0.00 0 18 25 2 738.89014 1476.77300 2.48 25.89 2370 2370 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.14 0.00 0 23 100 2 738.89264 1476.77800 5.86 30.74 2590 2590 MS2 19/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.14 0.00 0 23 25 2 738.89056 1476.77385 3.05 24.49 2041 2041 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 405 3.14 0.00 0 15 100 2 738.89362 1476.77995 7.19 29.32 3040 3040 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 3.13 0.00 0 38 100 2 738.89282 1476.77837 6.11 28.29 2792 2792 MS2 19/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.12 0.00 0 27 100 2 738.89349 1476.77971 7.02 30.63 2722 2722 MS2 18/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 444 3.08 0.00 0 14 25 2 738.88922 1476.77117 1.24 26.28 2306 2306 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.07 0.00 0 52 100 2 738.89197 1476.77666 4.96 29.59 2736 2736 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.04 0.00 0 52 25 2 738.88947 1476.77165 1.57 24.24 2038 2038 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.02 0.00 0 3 25 2 738.88605 1476.76482 -3.06 29.62 3110 3110 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.99 0.00 0 9 25 2 738.89032 1476.77336 2.72 25.89 2226 2226 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 406 2.97 0.00 0 17 100 2 738.89307 1476.77886 6.44 29.43 3068 3068 MS2 19/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 380 2.93 0.00 0 50 100 2 738.89185 1476.77641 4.79 29.62 2570 2570 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.93 0.00 0 33 100 2 738.89288 1476.77849 6.20 29.56 2562 2562 MS2 19/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.92 0.00 0 7 25 2 738.88977 1476.77226 1.98 27.13 2535 2535 MS2 17/22 Linfeng_122411_rIgG_4.raw High FQELQLAAGR Unambiguous 4 1 IPI00061200.5 CID 1.0000 0.0000 1 1 435 2.91 0.00 0 27 25 2 566.80743 1132.60759 -3.00 30.63 3482 3482 MS2 17/18 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 428 2.89 0.00 0 38 100 2 738.89294 1476.77861 6.28 28.13 2757 2757 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 39 25 2 738.88611 1476.76494 -2.98 29.46 3399 3399 MS2 20/22 Linfeng_091311_rIgG_2.raw High FQELQLAAGR Unambiguous 4 1 IPI00061200.5 CID 1.0000 0.0000 1 1 470 2.85 0.00 0 11 100 2 566.81226 1132.61724 5.51 32.46 3302 3302 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 472 2.85 0.00 0 15 25 2 738.88654 1476.76579 -2.40 29.49 3358 3358 MS2 19/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.84 0.00 0 17 25 2 738.89008 1476.77287 2.39 27.61 2484 2484 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.83 0.00 0 22 100 2 738.89215 1476.77703 5.20 30.26 3249 3249 MS2 19/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.78 0.00 0 32 25 2 738.88861 1476.76995 0.41 26.06 2493 2493 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 2.75 0.00 0 54 100 2 738.89185 1476.77641 4.79 30.82 2981 2981 MS2 18/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.74 0.00 0 23 100 2 738.89276 1476.77825 6.03 30.57 2751 2751 MS2 16/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.70 0.00 0 48 100 2 738.89264 1476.77800 5.86 30.34 2878 2878 MS2 14/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 424 2.69 0.00 0 19 100 2 738.89319 1476.77910 6.61 30.69 2581 2581 MS2 18/22 Linfeng_20120125_PCAF_3.raw High NLDLDSIIDEVR Unambiguous 2 1 IPI00061200.5 CID 1.0000 0.0000 1 1 418 2.66 0.00 0 35 25 2 701.36658 1401.72588 2.72 45.31 4904 4904 MS2 19/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 478 2.65 0.00 0 44 25 3 492.92874 1476.77167 1.58 24.37 2055 2055 MS2 21/44 Linfeng_122411_rIgG_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.49 0.00 0 31 100 2 738.89374 1476.78020 7.35 30.51 3329 3329 MS2 17/22 Linfeng_20120125_PCAF_8.raw High NLDLDSIIDEVR Unambiguous 2 1 IPI00061200.5 CID 1.0000 0.0000 1 1 419 2.48 0.00 0 22 25 2 701.36591 1401.72453 1.76 45.13 4721 4721 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.47 0.00 0 15 25 2 738.89001 1476.77275 2.31 28.54 2780 2780 MS2 16/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 395 2.42 0.00 0 49 100 2 738.89209 1476.77690 5.12 30.66 2744 2744 MS2 19/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 2.36 0.00 0 38 100 2 738.89325 1476.77922 6.69 30.64 3360 3360 MS2 18/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 448 2.34 0.00 0 10 25 2 738.88995 1476.77263 2.23 27.68 2464 2464 MS2 18/22 Linfeng_122411_rIgG_3.raw High LLESEEcR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.33 0.00 0 37 25 2 518.23932 1035.47136 -6.01 19.84 1993 1993 MS2 12/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FQELQLAAGR Unambiguous 4 1 IPI00061200.5 CID 1.0000 0.0000 1 1 423 2.25 0.00 0 58 100 2 566.81281 1132.61833 6.48 31.98 3200 3200 MS2 15/18 Linfeng_20120125_PCAF_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LALDMEIATYR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 345 2.16 0.00 0 8 100 2 648.34082 1295.67436 6.10 45.58 6840 6840 MS2 16/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00102815.1 Nucleolar complex protein 3 homolog 5.00 2 3 3 3 8.35 5.00 3 3 800 92.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLQGDSFLNEDLNQLIK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 361 3.95 0.00 0 27 25 3 665.34613 1994.02384 0.41 45.71 5441 5441 MS2 31/64 Linfeng_091311_rIgG_3.raw High LGQASLGVIK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 215 2.37 0.00 0 46 25 2 493.30417 985.60106 -3.10 28.03 3167 3167 MS2 15/18 Linfeng_091311_rIgG_3.raw High SPLLPAVLEGLAK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 98 2.04 0.00 0 36 25 2 654.39972 1307.79216 -0.94 44.20 5251 5251 MS2 17/24 Linfeng_091311_rIgG_3.raw IPI00154590.6 MKI67 FHA domain-interacting nucleolar phosphoprotein 23.55 2 5 5 9 12.01 17.41 4 4 15.19 15.70 3 5 293 34.2 9.88 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TVDSQGPTPVcTPTFLER Unambiguous 1 1 IPI00154590.6 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 311 3.85 0.00 0 6 100 2 1002.99554 2004.98381 7.09 39.84 5020 5020 MS2 24/34 Linfeng_20120125_PCAF_6.raw High IVAETMNNYLFGER Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 249 3.55 0.00 0 13 25 2 828.90332 1656.79936 -3.46 37.96 4429 4429 MS2 15/26 Linfeng_091311_rIgG_7.raw High TVDSQGPTPVcTPTFLER Unambiguous 1 1 IPI00154590.6 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 3.39 0.00 0 11 100 2 1002.99634 2004.98540 7.88 39.75 4997 4997 MS2 20/34 Linfeng_20120125_PCAF_6.raw High GYAFVEFESEDVAK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 131 3.08 0.00 0 31 25 2 795.86548 1590.72368 -5.42 37.03 4312 4312 MS2 21/26 Linfeng_091311_rIgG_7.raw High GIDYDFPSLILQK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 348 3.07 0.00 0 21 25 2 754.90210 1508.79692 -1.76 43.68 5151 5151 MS2 20/24 Linfeng_091311_rIgG_7.raw High GYAFVEFESEDVAK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 188 2.91 0.00 0 18 100 2 795.87482 1590.74236 6.32 44.57 6161 6161 MS2 20/26 Linfeng_20120125_PCAF_6.raw High IVAETMNNYLFGER Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 313 2.59 0.00 0 48 100 2 828.91199 1656.81670 7.01 46.74 6688 6688 MS2 16/26 Linfeng_20120125_PCAF_6.raw High GYAFVEFESEDVAK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 179 2.45 0.00 0 23 100 2 795.87427 1590.74126 5.63 44.73 6199 6199 MS2 20/26 Linfeng_20120125_PCAF_6.raw High VSGTLDTPEK Unambiguous 1 1 IPI00154590.6 CID 1.0000 0.0000 1 1 398 2.31 0.00 0 15 25 2 523.77094 1046.53459 -1.80 19.43 1950 1950 MS2 14/18 Linfeng_091311_rIgG_7.raw IPI00154742.6 IGL@ protein 30.34 14 5 5 14 37.01 30.34 5 14 0.00 234 24.8 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SYScQVTHEGSTVEK Unambiguous 14 1 IPI00154742.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 97 3.82 0.00 0 6 25 2 856.38104 1711.75481 -2.59 19.07 1961 1961 MS2 22/28 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 259 3.69 0.00 0 27 21 2 872.43030 1743.85332 -3.18 38.64 4602 4602 MS2 22/28 Linfeng_091311_rIgG_8.raw High SYScQVTHEGSTVEK Unambiguous 14 1 IPI00154742.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 104 3.49 0.00 0 0 25 2 856.38245 1711.75762 -0.95 19.01 1990 1990 MS2 20/28 Linfeng_091311_rIgG_10.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 19 25 2 872.42963 1743.85198 -3.95 38.57 4662 4662 MS2 19/28 Linfeng_091311_rIgG_10.raw High ATLVcLISDFYPGAVTVAWK Unambiguous 14 1 IPI00154742.6 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 348 2.77 0.00 0 29 25 3 737.72241 2211.15268 0.34 53.28 6460 6460 MS2 34/76 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 295 2.68 0.00 0 40 25 3 581.95599 1743.85343 -3.12 38.67 4606 4606 MS2 26/56 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 297 2.52 0.00 0 35 25 3 581.95605 1743.85361 -3.02 38.50 4653 4653 MS2 24/56 Linfeng_091311_rIgG_10.raw High ITcGGNNIGSK Unambiguous 1 1 IPI00154742.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 307 2.30 0.00 0 33 25 2 560.77332 1120.53935 -1.99 16.64 1616 1616 MS2 16/20 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 476 2.29 0.00 0 38 25 2 495.75787 990.50847 -1.81 15.21 1395 1395 MS2 12/18 Linfeng_091311_rIgG_6.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 493 2.21 0.00 0 9 25 2 495.75797 990.50865 -1.62 14.85 1362 1362 MS2 15/18 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 527 2.11 0.00 0 51 25 2 495.75818 990.50908 -1.19 14.79 1353 1353 MS2 13/18 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 537 2.09 0.00 0 35 25 2 495.75839 990.50951 -0.76 15.06 1320 1320 MS2 13/18 Linfeng_091311_rIgG_9.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 472 2.07 0.00 0 47 25 2 495.75745 990.50762 -2.67 15.02 1383 1383 MS2 12/18 Linfeng_091311_rIgG_2.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 554 2.05 0.00 0 90 25 2 495.76010 990.51293 2.69 14.46 1276 1276 MS2 12/18 Linfeng_091311_rIgG_3.raw IPI00166729.4 Zinc-alpha-2-glycoprotein 11.41 1 3 3 3 0.00 7.61 11.41 3 3 298 34.2 6.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYLEEEcPATLR Unambiguous 1 1 IPI00166729.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.81 0.00 0 17 25 2 726.34760 1451.68791 3.00 26.55 2342 2342 MS2 17/22 Linfeng_122411_rIgG_2.raw High QKWEAEPVYVQR Unambiguous 1 1 IPI00166729.4 CID 1.0000 0.0000 1 1 465 2.64 0.00 1 28 25 3 511.60059 1532.78720 1.01 24.97 2303 2303 MS2 20/44 Linfeng_122411_rIgG_6.raw High AGEVQEPELR Unambiguous 1 1 IPI00166729.4 CID 1.0000 0.0000 1 1 274 2.16 0.00 0 33 25 2 564.28809 1127.56890 -0.26 4.90 556 556 MS2 15/18 Linfeng_122411_rIgG_6.raw IPI00169325.1 WD repeat-containing protein 36 16.19 4 13 13 18 27.20 12.09 10 10 19.30 7.68 6 8 951 105.3 7.53 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LEEGLVNNKYDTALNLLK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 319 3.35 0.00 1 11 25 3 683.03833 2047.10044 -3.25 37.50 4409 4409 MS2 30/68 Linfeng_091311_rIgG_3.raw High ILLGSEQGSLQLWNVK Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 280 3.19 0.00 0 5 25 3 595.66675 1784.98569 -2.75 40.93 4842 4842 MS2 29/60 Linfeng_091311_rIgG_3.raw High SFHTYDVQK Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 228 2.84 0.00 0 34 25 3 375.51617 1124.53397 -2.80 20.38 2112 2112 MS2 20/32 Linfeng_091311_rIgG_3.raw High YAAPEQNNDPQQSK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 106 2.80 0.00 0 9 25 2 795.36237 1589.71745 -1.03 17.42 1694 1694 MS2 22/26 Linfeng_091311_rIgG_3.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 277 2.77 0.00 0 24 25 2 637.81354 1274.61980 -2.00 27.65 3115 3115 MS2 16/22 Linfeng_091311_rIgG_3.raw High SAPFFIPTIPGLVPR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 169 2.71 0.00 0 18 25 2 806.46832 1611.92937 2.21 46.63 4914 4914 MS2 16/28 Linfeng_122411_rIgG_3.raw High IWIFDGPTGEGR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 349 2.66 0.00 0 8 25 2 674.33911 1347.67095 1.26 38.68 3886 3886 MS2 18/22 Linfeng_122411_rIgG_3.raw High LScSTWNYQK Unambiguous 4 1 IPI00169325.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 2.65 0.00 0 17 25 2 643.79236 1286.57744 -4.65 25.61 2836 2836 MS2 15/18 Linfeng_091311_rIgG_3.raw High TASALFAGFR Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 9 25 2 520.78076 1040.55425 1.76 34.60 3366 3366 MS2 17/18 Linfeng_122411_rIgG_3.raw High LEEGLVNNK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 430 2.51 0.00 0 36 25 2 508.27359 1015.53990 -1.97 21.84 2311 2311 MS2 14/16 Linfeng_091311_rIgG_3.raw High IWIFDGPTGEGR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 355 2.49 0.00 0 10 25 2 674.33746 1347.66765 -1.19 39.76 4695 4695 MS2 16/22 Linfeng_091311_rIgG_3.raw High TASALFAGFR Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 286 2.39 0.00 0 18 25 2 520.77814 1040.54900 -3.28 35.71 4182 4182 MS2 17/18 Linfeng_091311_rIgG_3.raw High SAPFFIPTIPGLVPR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 192 2.35 0.00 0 16 25 2 806.46918 1611.93108 3.27 46.60 5019 5019 MS2 12/28 Linfeng_122411_rIgG_4.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 349 2.28 0.00 0 18 25 2 637.81732 1274.62737 3.93 24.03 1984 1984 MS2 15/22 Linfeng_122411_rIgG_3.raw Medium ALGLFSNDIPHVVR Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 347 2.27 0.00 0 17 25 3 513.28760 1537.84824 -0.24 35.76 3513 3513 MS2 25/52 Linfeng_122411_rIgG_3.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 315 2.24 0.00 0 33 25 2 637.81702 1274.62676 3.46 23.03 1866 1866 MS2 13/22 Linfeng_122411_rIgG_3.raw High EPLLVTNGADNALR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 311 2.23 0.00 0 15 25 2 741.89777 1482.78826 -1.96 31.87 3684 3684 MS2 19/26 Linfeng_091311_rIgG_3.raw High VVNLGVLAQK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 147 2.19 0.00 0 11 25 2 520.82800 1040.64873 2.32 30.07 2781 2781 MS2 16/18 Linfeng_122411_rIgG_3.raw IPI00170548.1 Isoform 1 of ATPase family AAA domain-containing protein 2 5.61 1 4 6 8 12.01 4.75 5 5 8.24 2.81 3 3 1390 158.5 6.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AVLQALEVLPVAPPPEPR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 112 3.57 0.00 0 37 25 3 632.70502 1896.10050 2.68 41.01 4202 4202 MS2 32/68 Linfeng_122411_rIgG_2.raw High AVLQALEVLPVAPPPEPR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 117 3.03 0.00 0 31 25 3 632.70221 1896.09208 -1.76 42.22 5068 5068 MS2 31/68 Linfeng_091311_rIgG_2.raw High SQVEQQQLITVEK Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 464 2.78 0.00 0 23 25 2 765.41052 1529.81377 -2.13 27.30 3105 3105 MS2 20/24 Linfeng_091311_rIgG_2.raw High GcLFYGPPGTGK Unambiguous 3 2 IPI00170548.1;IPI00456004.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 2.43 0.00 0 28 25 2 627.30408 1253.60088 2.00 29.07 2680 2680 MS2 17/22 Linfeng_122411_rIgG_2.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 365 2.24 0.00 0 66 25 2 500.27814 999.54900 2.01 25.76 2236 2236 MS2 13/16 Linfeng_122411_rIgG_2.raw High LEEQEEDTFR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 115 2.11 0.00 0 38 25 2 648.28979 1295.57231 -2.12 23.91 2633 2633 MS2 16/18 Linfeng_091311_rIgG_2.raw High KISQAKDDSQNAIDHK Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 317 2.07 0.00 2 19 25 2 899.46381 1797.92034 6.28 32.00 3629 3629 MS2 8/30 Linfeng_091311_rIgG_5.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 312 2.03 0.00 0 25 25 2 500.27542 999.54357 -3.43 28.78 3307 3307 MS2 14/16 Linfeng_091311_rIgG_2.raw IPI00171611.7 Histone H3.2 39.71 8 1 5 5 17.19 39.71 5 5 0.00 136 15.4 11.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 177 6.79 0.00 0 11 9 4 879.18445 3513.71596 3.68 54.58 6631 6631 MS2 53/186 Linfeng_091311_rIgG_10.raw High YQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 23 24 3 417.57394 1250.70728 -2.46 24.84 2814 2814 MS2 20/36 Linfeng_091311_rIgG_10.raw High RYQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 227 2.73 0.00 2 15 25 3 469.60736 1406.80753 -2.80 21.86 2395 2395 MS2 24/40 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw High STELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 2 510 2.06 0.00 0 47 25 2 416.24890 831.49053 -3.55 32.99 3934 3934 MS2 11/12 Linfeng_091311_rIgG_10.raw IPI00176642.3 Serine/threonine-protein kinase 12 16.86 3 5 5 5 0.00 13.87 16.86 5 5 344 39.3 9.29 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HFTIDDFEIGRPLGK Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 425 3.10 0.00 0 13 25 3 582.30603 1744.90354 1.01 35.58 3683 3683 MS2 29/56 Linfeng_122411_rIgG_6.raw High DIKPENLLLGLK Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 104 2.87 0.00 0 11 25 3 451.61053 1352.81705 1.63 38.62 4063 4063 MS2 24/44 Linfeng_122411_rIgG_6.raw High LPLAQVSAHPWVR Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 295 2.74 0.00 0 7 25 3 491.94989 1473.83512 1.73 31.60 3182 3182 MS2 24/48 Linfeng_122411_rIgG_6.raw High FGNVYLAR Unambiguous 2 1 IPI00176642.3 CID 1.0000 0.0000 1 1 358 2.61 0.00 0 23 25 2 470.25665 939.50603 1.40 27.23 2606 2606 MS2 13/14 Linfeng_122411_rIgG_6.raw High IYLILEYAPR Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 201 2.54 0.00 0 14 25 2 625.86200 1250.71672 1.88 40.37 4281 4281 MS2 16/18 Linfeng_122411_rIgG_6.raw IPI00177716.7 Isoform HMG-Y of High mobility group protein HMG-I/HMG-Y 42.71 2 1 5 8 27.89 42.71 5 8 96 10.7 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 74 4.85 0.00 2 7 25 2 1118.99841 2236.98955 -2.01 20.76 2241 2241 MS2 22/36 Linfeng_091311_rIgG_10.raw High LEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 36 4.48 0.00 1 0 25 2 1054.95056 2108.89385 -2.48 22.33 2460 2460 MS2 21/34 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 11 4.20 0.00 0 3 25 2 869.84003 1738.67278 -2.68 22.06 2306 2306 MS2 22/28 Linfeng_091311_rIgG_9.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 86 3.60 0.00 2 2 7 3 746.33551 2236.99198 -0.92 20.71 2234 2234 MS2 32/72 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 10 3.38 0.00 0 1 25 2 869.84070 1738.67412 -1.90 21.87 2396 2396 MS2 23/28 Linfeng_091311_rIgG_10.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 90 2.95 0.00 2 2 25 3 746.33417 2236.98795 -2.72 20.83 2132 2132 MS2 32/72 Linfeng_091311_rIgG_9.raw Medium KQPPKEPSEVPTPK Unambiguous 1 1 IPI00177716.7 CID 1.0000 0.0000 1 1 383 2.43 0.00 2 6 25 3 521.28882 1561.85190 -4.23 17.64 1794 1794 MS2 23/52 Linfeng_091311_rIgG_10.raw High SSQPLASK Unambiguous 5 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 584 2.02 0.00 0 7 25 2 409.22400 817.44072 -0.88 4.98 512 512 MS2 12/14 Linfeng_091311_rIgG_10.raw IPI00178047.6 Putative uncharacterized protein PELP1 3.85 4 3 3 3 7.97 3.85 3 3 1038 109.8 4.30 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLLLESVSGLLQPR Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 66 3.39 0.00 0 19 25 3 513.31421 1537.92807 -2.09 48.65 5883 5883 MS2 32/52 Linfeng_091311_rIgG_2.raw High LPSLGAGFSQGLK Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 402 2.32 0.00 0 70 25 2 637.85577 1274.70427 -4.79 35.24 4165 4165 MS2 18/24 Linfeng_091311_rIgG_2.raw High LLPQVLNSWSIGR Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 224 2.26 0.00 0 34 25 2 741.92377 1482.84026 -1.71 41.71 5003 5003 MS2 20/24 Linfeng_091311_rIgG_2.raw IPI00179700.3 Isoform HMG-I of High mobility group protein HMG-I/HMG-Y 48.60 5 2 6 13 42.71 48.60 6 13 107 11.7 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 74 4.85 0.00 2 7 25 2 1118.99841 2236.98955 -2.01 20.76 2241 2241 MS2 22/36 Linfeng_091311_rIgG_10.raw High LEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 36 4.48 0.00 1 0 25 2 1054.95056 2108.89385 -2.48 22.33 2460 2460 MS2 21/34 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 11 4.20 0.00 0 3 25 2 869.84003 1738.67278 -2.68 22.06 2306 2306 MS2 22/28 Linfeng_091311_rIgG_9.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 86 3.60 0.00 2 2 7 3 746.33551 2236.99198 -0.92 20.71 2234 2234 MS2 32/72 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 10 3.38 0.00 0 1 25 2 869.84070 1738.67412 -1.90 21.87 2396 2396 MS2 23/28 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQKEPSEVPTPK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 242 3.12 0.00 2 3 25 4 640.34760 2558.36855 -5.48 26.03 2982 2982 MS2 36/144 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 272 3.12 0.00 1 9 25 3 531.96753 1593.88803 -4.97 22.90 2541 2541 MS2 29/60 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 248 3.11 0.00 1 10 25 3 531.96875 1593.89170 -2.68 23.97 2689 2689 MS2 28/60 Linfeng_091311_rIgG_10.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 90 2.95 0.00 2 2 25 3 746.33417 2236.98795 -2.72 20.83 2132 2132 MS2 32/72 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 274 2.71 0.00 1 35 25 3 531.96716 1593.88694 -5.66 23.06 2446 2446 MS2 21/60 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 227 2.69 0.00 1 0 25 2 797.44965 1593.89202 -2.48 23.28 2478 2478 MS2 17/30 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 209 2.49 0.00 1 4 25 2 797.44995 1593.89263 -2.09 23.00 2556 2556 MS2 18/30 Linfeng_091311_rIgG_10.raw High SSQPLASK Unambiguous 5 2 IPI00177716.7;IPI00179700.3 CID 1.0000 0.0000 1 1 584 2.02 0.00 0 7 25 2 409.22400 817.44072 -0.88 4.98 512 512 MS2 12/14 Linfeng_091311_rIgG_10.raw IPI00179964.5 Isoform 1 of Polypyrimidine tract-binding protein 1 11.49 3 3 3 4 10.81 11.49 3 4 0.00 531 57.2 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VTPQSLFILFGVYGDVQR Unambiguous 3 1 IPI00179964.5 CID 1.0000 0.0000 1 1 304 3.23 0.00 0 23 25 3 680.37073 2039.09763 0.74 52.09 6199 6199 MS2 28/68 Linfeng_091311_rIgG_5.raw High IAIPGLAGAGNSVLLVSNLNPER Unambiguous 3 1 IPI00179964.5 CID 1.0000 0.0000 1 1 170 2.68 0.00 0 24 25 3 759.09491 2275.27018 -2.99 45.31 5361 5361 MS2 31/88 Linfeng_091311_rIgG_6.raw High IAIPGLAGAGNSVLLVSNLNPER Unambiguous 3 1 IPI00179964.5 CID 1.0000 0.0000 1 1 169 2.56 0.00 0 27 25 3 759.09479 2275.26981 -3.15 45.32 5351 5351 MS2 25/88 Linfeng_091311_rIgG_5.raw Medium KLPIDVTEGEVISLGLPFGK Unambiguous 3 1 IPI00179964.5 CID 1.0000 0.0000 1 1 151 2.34 0.00 1 14 25 3 704.73456 2112.18912 -2.88 45.31 5350 5350 MS2 27/76 Linfeng_091311_rIgG_5.raw IPI00181728.1 Ribosome biogenesis protein BRX1 homolog 20.11 1 6 6 8 20.81 20.11 6 8 353 41.4 9.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SQPFVDHVFTFTILDNR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 365 3.28 0.00 0 4 25 3 679.34491 2036.02018 -1.72 43.42 5125 5125 MS2 29/64 Linfeng_091311_rIgG_6.raw Medium GSRPLLSFDPAFDELPHYALLK Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 287 2.92 0.00 0 11 25 4 622.33124 2486.30312 -1.93 42.91 5061 5061 MS2 34/126 Linfeng_091311_rIgG_6.raw High HATAEEVEEEERDR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 91 2.86 0.00 1 6 25 3 567.25397 1699.74735 -2.67 18.88 1905 1905 MS2 23/52 Linfeng_091311_rIgG_6.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 302 2.75 0.00 0 27 25 2 658.87964 1316.75200 -4.04 45.05 5328 5328 MS2 16/20 Linfeng_091311_rIgG_6.raw High HATAEEVEEEER Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 61 2.64 0.00 0 0 25 2 714.81488 1428.62248 -0.93 18.16 1772 1772 MS2 18/22 Linfeng_091311_rIgG_7.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 282 2.18 0.00 0 28 25 2 658.88104 1316.75481 -1.91 45.29 5453 5453 MS2 15/20 Linfeng_091311_rIgG_8.raw High FVLNLIK Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 44 2.10 0.00 0 4 25 2 423.77481 846.54234 -2.89 37.61 4399 4399 MS2 11/12 Linfeng_091311_rIgG_6.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 271 2.08 0.00 0 37 25 2 658.88159 1316.75591 -1.07 45.35 5359 5359 MS2 15/20 Linfeng_091311_rIgG_7.raw IPI00215637.5 ATP-dependent RNA helicase DDX3X 12.54 3 6 6 9 15.39 10.73 5 5 10.56 4.98 3 4 0.00 662 73.2 7.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TAAFLLPILSQIYSDGPGEALR Unambiguous 2 1 IPI00215637.5 CID 1.0000 0.0000 1 1 270 5.35 0.00 0 40 25 3 778.09113 2332.25882 1.71 54.40 6455 6455 MS2 38/84 Linfeng_091311_rIgG_4.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 284 3.21 0.00 0 11 25 2 646.36401 1291.72075 -3.82 48.40 5779 5779 MS2 19/22 Linfeng_091311_rIgG_4.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 266 3.11 0.00 0 12 25 2 646.36853 1291.72978 3.17 47.35 4760 4760 MS2 18/22 Linfeng_122411_rIgG_9.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 256 2.88 0.00 0 20 25 2 646.36810 1291.72893 2.51 47.21 5096 5096 MS2 16/22 Linfeng_122411_rIgG_4.raw High VRPcVVYGGADIGQQIR Unambiguous 3 1 IPI00215637.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 406 2.63 0.00 0 31 25 3 629.99890 1887.98215 -1.97 29.32 3336 3336 MS2 29/64 Linfeng_091311_rIgG_4.raw High YLVLDEADR Unambiguous 3 1 IPI00215637.5 CID 1.0000 0.0000 1 1 393 2.55 0.00 0 30 25 2 547.28094 1093.55461 1.97 28.52 2720 2720 MS2 15/16 Linfeng_122411_rIgG_4.raw High VGSTSENITQK Unambiguous 2 1 IPI00215637.5 CID 1.0000 0.0000 1 1 367 2.19 0.00 0 26 25 2 582.29749 1163.58769 -2.24 16.76 1590 1590 MS2 14/20 Linfeng_091311_rIgG_4.raw High YLVLDEADR Unambiguous 3 1 IPI00215637.5 CID 1.0000 0.0000 1 1 344 2.02 0.00 0 22 25 2 547.27808 1093.54888 -3.28 30.35 3474 3474 MS2 14/16 Linfeng_091311_rIgG_4.raw High SPILVATAVAAR Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 142 2.02 0.00 0 47 25 2 584.85724 1168.70720 1.97 30.36 2962 2962 MS2 18/22 Linfeng_122411_rIgG_4.raw IPI00215965.3 Isoform A1-B of Heterogeneous nuclear ribonucleoprotein A1 47.04 12 14 15 48 70.98 46.77 13 22 40.36 33.06 9 12 35.35 19.62 5 14 372 38.7 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR Unambiguous 1 1 IPI00215965.3 CID 1.0000 0.0000 1 1 7 7.03 0.00 0 1 25 3 958.71490 2874.13016 -2.45 29.82 3389 3389 MS2 49/128 Linfeng_091311_rIgG_6.raw High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR Unambiguous 1 1 IPI00215965.3 CID 1.0000 0.0000 1 1 14 5.76 0.00 0 2 25 3 958.71997 2874.14536 2.83 28.90 2828 2828 MS2 37/128 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 319 4.26 0.00 0 7 20 2 892.95569 1784.90410 -1.40 43.06 5072 5072 MS2 26/30 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 356 3.96 0.00 0 20 25 2 892.96051 1784.91374 4.01 41.86 4466 4466 MS2 26/30 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 334 3.81 0.00 0 20 25 2 892.95898 1784.91069 2.30 41.89 3906 3906 MS2 23/30 Linfeng_122411_rIgG_7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 11 3.75 0.00 0 4 25 2 847.85315 1694.69902 -0.66 17.99 1727 1727 MS2 22/34 Linfeng_091311_rIgG_9.raw High RGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 182 3.75 0.00 1 45 25 3 619.28998 1855.85538 -3.05 33.54 3865 3865 MS2 27/60 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 383 3.75 0.00 0 6 25 3 595.64197 1784.91135 2.67 41.90 4472 4472 MS2 31/60 Linfeng_122411_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 10 3.74 0.00 0 2 25 2 847.85260 1694.69792 -1.31 17.84 1728 1728 MS2 25/34 Linfeng_091311_rIgG_7.raw High RGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 215 3.66 0.00 1 28 25 3 619.29285 1855.86399 1.59 32.68 3321 3321 MS2 27/60 Linfeng_122411_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 12 3.62 0.00 0 0 25 2 847.85126 1694.69524 -2.89 17.90 1795 1795 MS2 23/34 Linfeng_091311_rIgG_8.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 13 3.46 0.00 0 13 25 2 847.85303 1694.69878 -0.80 17.90 1768 1768 MS2 25/34 Linfeng_091311_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 14 3.43 0.00 0 3 25 3 565.57007 1694.69565 -2.65 17.91 1738 1738 MS2 31/68 Linfeng_091311_rIgG_7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 13 3.18 0.00 0 7 25 3 565.57080 1694.69785 -1.35 17.99 1781 1781 MS2 24/68 Linfeng_091311_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 20 3.12 0.00 0 16 25 2 847.85602 1694.70476 2.73 16.97 1366 1366 MS2 17/34 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 385 3.11 0.00 0 5 25 3 595.63898 1784.90238 -2.36 43.09 5076 5076 MS2 33/60 Linfeng_091311_rIgG_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 493 3.02 0.00 0 14 25 2 609.82458 1218.64189 1.62 37.04 3865 3865 MS2 17/18 Linfeng_122411_rIgG_6.raw High KLFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 398 2.96 0.00 1 16 25 3 638.33698 1912.99637 -2.71 38.89 4560 4560 MS2 26/64 Linfeng_091311_rIgG_6.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 214 2.87 0.00 0 0 25 2 814.89191 1628.77654 -3.13 24.75 2684 2684 MS2 21/30 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 326 2.86 0.00 0 9 100 2 892.96069 1784.91411 4.21 55.15 7719 7719 MS2 22/30 Linfeng_20120125_PCAF_6.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 371 2.86 0.00 1 4 25 3 627.32495 1879.96030 -3.12 25.54 2818 2818 MS2 30/60 Linfeng_091311_rIgG_6.raw High KLFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 390 2.77 0.00 1 23 25 3 638.33966 1913.00443 1.50 37.99 3984 3984 MS2 28/64 Linfeng_122411_rIgG_6.raw Medium KRGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 274 2.74 0.00 2 11 25 4 496.74567 1983.96084 2.43 29.82 2949 2949 MS2 30/96 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 403 2.74 0.00 1 17 100 3 627.33051 1879.97696 5.74 37.74 4527 4527 MS2 23/60 Linfeng_20120125_PCAF_6.raw High EDSQRPGAHLTVK Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 393 2.74 0.00 0 0 25 2 719.37451 1437.74175 -1.94 17.52 1684 1684 MS2 16/24 Linfeng_091311_rIgG_7.raw High GFAFVTFDDHDSVDK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 132 2.74 0.00 0 31 100 2 850.38977 1699.77226 7.26 45.93 6494 6494 MS2 20/28 Linfeng_20120125_PCAF_6.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 377 2.73 0.00 1 14 100 3 627.33112 1879.97879 6.71 37.91 4566 4566 MS2 20/60 Linfeng_20120125_PCAF_6.raw High GGGFGGNDNFGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 74 2.72 0.00 0 15 25 2 577.75092 1154.49455 -2.49 25.24 2753 2753 MS2 18/22 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 373 2.69 0.00 1 2 25 3 627.32483 1879.95993 -3.32 24.91 2706 2706 MS2 27/60 Linfeng_091311_rIgG_7.raw Medium RGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 219 2.67 0.00 1 10 25 4 464.72180 1855.86538 2.34 32.69 3322 3322 MS2 33/90 Linfeng_122411_rIgG_6.raw High YHTVNGHNcEVR Unambiguous 8 1 IPI00215965.3 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.65 0.00 0 38 25 2 743.33606 1485.66484 -0.24 14.16 1221 1221 MS2 18/22 Linfeng_091311_rIgG_7.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 269 2.64 0.00 0 5 100 2 814.89960 1628.79192 6.31 23.42 1759 1759 MS2 19/30 Linfeng_20120125_PCAF_6.raw High GFAFVTFDDHDSVDK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 133 2.64 0.00 0 13 100 2 850.38983 1699.77239 7.33 46.40 6114 6114 MS2 17/28 Linfeng_20120125_PCAF_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 429 2.63 0.00 0 17 25 2 609.82135 1218.63542 -3.69 38.04 4453 4453 MS2 17/18 Linfeng_091311_rIgG_6.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 221 2.62 0.00 0 15 25 2 814.89679 1628.78630 2.86 21.78 1879 1879 MS2 17/30 Linfeng_122411_rIgG_6.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 275 2.54 0.00 0 5 100 2 814.89923 1628.79119 5.86 22.41 1671 1671 MS2 17/30 Linfeng_20120125_PCAF_6.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 420 2.52 0.00 0 6 25 2 609.82123 1218.63518 -3.89 37.98 4432 4432 MS2 17/18 Linfeng_091311_rIgG_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 477 2.50 0.00 0 7 34 2 609.82721 1218.64714 5.93 47.53 6879 6879 MS2 17/18 Linfeng_20120125_PCAF_6.raw High GGGFGGNDNFGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 98 2.47 0.00 0 26 25 2 577.75348 1154.49968 1.95 22.70 2003 2003 MS2 18/22 Linfeng_122411_rIgG_6.raw High GFAFVTFDDHDSVDK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 130 2.46 0.00 0 15 100 2 850.38977 1699.77226 7.26 46.58 6157 6157 MS2 18/28 Linfeng_20120125_PCAF_7.raw Medium KLFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 410 2.44 0.00 1 13 6 3 638.33673 1912.99564 -3.10 38.89 4548 4548 MS2 28/64 Linfeng_091311_rIgG_7.raw Medium SESPKEPEQLRK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 359 2.40 0.00 2 9 25 3 476.58633 1427.74445 -3.15 16.10 1486 1486 MS2 21/44 Linfeng_091311_rIgG_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 461 2.37 0.00 0 8 26 2 609.82727 1218.64726 6.03 47.35 6834 6834 MS2 17/18 Linfeng_20120125_PCAF_6.raw Medium IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 374 2.32 0.00 1 42 100 3 627.33130 1879.97934 7.01 36.84 4320 4320 MS2 21/60 Linfeng_20120125_PCAF_6.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 428 2.32 0.00 0 20 79 2 609.82721 1218.64714 5.93 47.03 6757 6757 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 378 2.27 0.00 1 23 100 3 627.33118 1879.97898 6.81 35.62 4038 4038 MS2 22/60 Linfeng_20120125_PCAF_6.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 482 2.23 0.00 0 29 100 2 609.82739 1218.64751 6.23 46.91 6727 6727 MS2 16/18 Linfeng_20120125_PCAF_6.raw High SESPKEPEQLR Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 288 2.18 0.00 1 0 25 2 650.32892 1299.65056 -2.63 18.37 1802 1802 MS2 17/20 Linfeng_091311_rIgG_7.raw IPI00216457.7 Histone H2A type 2-A 63.08 2 5 11 178 151.20 36.15 5 48 362.72 63.08 11 114 39.97 35.38 4 16 130 14.1 10.90 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 206 4.90 0.00 0 21 25 3 978.52106 2933.54862 1.49 56.64 4844 4844 MS2 33/112 Linfeng_122411_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.79 0.00 0 5 25 4 483.54880 1931.17336 2.30 44.25 4524 4524 MS2 49/108 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.77 0.00 0 10 25 4 483.54861 1931.17263 1.92 43.83 4430 4430 MS2 54/108 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 2 25 3 644.39636 1931.17453 2.91 52.18 5464 5464 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.68 0.00 0 24 25 3 644.39594 1931.17325 2.25 43.60 4400 4400 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.65 0.00 0 7 25 3 644.39673 1931.17563 3.48 47.06 4841 4841 MS2 36/72 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 149 4.58 0.00 2 6 5 3 702.06671 2104.18558 -0.87 33.67 3128 3128 MS2 28/68 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.57 0.00 0 11 25 3 644.39423 1931.16812 -0.41 48.54 5927 5927 MS2 36/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.57 0.00 0 2 25 3 644.39661 1931.17527 3.29 44.66 4534 4534 MS2 35/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.56 0.00 0 5 25 3 644.39642 1931.17472 3.01 46.02 4708 4708 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.55 0.00 0 8 25 3 644.39746 1931.17783 4.62 43.91 4321 4321 MS2 33/72 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.51 0.00 0 11 25 4 483.54669 1931.16494 -2.06 45.52 5543 5543 MS2 50/108 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.50 0.00 0 11 25 3 644.39447 1931.16886 -0.03 45.48 5376 5376 MS2 41/72 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.49 0.00 0 4 25 3 644.39606 1931.17362 2.44 44.03 4178 4178 MS2 35/72 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.47 0.00 0 8 25 3 644.39685 1931.17600 3.67 44.08 4593 4593 MS2 38/72 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.46 0.00 0 8 25 3 644.39355 1931.16611 -1.45 45.40 5399 5399 MS2 39/72 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.44 0.00 0 27 25 3 644.39667 1931.17545 3.39 56.29 5915 5915 MS2 36/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.40 0.00 0 5 25 3 644.39618 1931.17398 2.63 48.07 4970 4970 MS2 32/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.32 0.00 0 11 25 3 644.39618 1931.17398 2.63 44.07 4501 4501 MS2 36/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.29 0.00 0 4 25 3 644.39386 1931.16703 -0.98 45.22 5379 5379 MS2 37/72 Linfeng_091311_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.28 0.00 0 5 25 3 644.39636 1931.17453 2.91 51.15 5343 5343 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.27 0.00 0 13 11 3 644.39471 1931.16959 0.35 44.02 4951 4951 MS2 37/72 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.23 0.00 0 24 25 3 644.39587 1931.17307 2.15 43.84 4717 4717 MS2 33/72 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.22 0.00 0 30 25 3 644.39270 1931.16355 -2.78 45.44 5472 5472 MS2 38/72 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 4 25 2 966.09082 1931.17436 2.82 44.08 4184 4184 MS2 22/36 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 2 25 2 966.09119 1931.17510 3.20 46.06 4713 4713 MS2 21/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.17 0.00 0 5 17 3 644.39270 1931.16355 -2.78 45.12 5188 5188 MS2 35/72 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.17 0.00 0 4 25 3 644.39673 1931.17563 3.48 49.11 5101 5101 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.11 0.00 0 29 25 3 644.39398 1931.16739 -0.79 45.18 5500 5500 MS2 37/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.10 0.00 0 36 25 3 644.39435 1931.16849 -0.22 47.41 5785 5785 MS2 35/72 Linfeng_091311_rIgG_10.raw High LLGKVTIAQGGVLPNIQAVLLPK Unambiguous 8 1 IPI00216457.7 CID 1.0000 0.0000 1 1 5 4.09 0.00 1 11 25 3 781.49152 2342.46000 2.78 42.93 4314 4314 MS2 35/88 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.06 0.00 0 2 25 2 966.09186 1931.17644 3.90 44.00 4332 4332 MS2 22/36 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.06 0.00 0 27 25 3 644.39343 1931.16574 -1.64 45.55 5384 5384 MS2 37/72 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.06 0.00 0 3 25 3 644.39685 1931.17600 3.67 53.20 5578 5578 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.99 0.00 0 5 25 3 644.39655 1931.17508 3.20 50.13 5223 5223 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 22 3.98 0.00 0 8 25 3 644.39307 1931.16465 -2.21 45.32 5460 5460 MS2 36/72 Linfeng_091311_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.96 0.00 0 6 25 2 966.09174 1931.17620 3.77 54.23 5685 5685 MS2 18/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.94 0.00 0 17 25 3 644.39386 1931.16703 -0.98 45.42 5364 5364 MS2 36/72 Linfeng_091311_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.91 0.00 0 17 25 3 644.39343 1931.16574 -1.64 45.38 5370 5370 MS2 35/72 Linfeng_091311_rIgG_6.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 114 3.90 0.00 2 0 25 2 1052.59790 2104.18852 0.53 33.83 3149 3149 MS2 21/34 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 5 3.89 0.00 1 0 25 2 1030.13843 2059.26958 2.77 40.63 4017 4017 MS2 22/38 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.89 0.00 0 18 25 3 644.39539 1931.17160 1.39 44.06 4583 4583 MS2 37/72 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.88 0.00 0 5 25 3 644.39697 1931.17636 3.86 55.25 5788 5788 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.87 0.00 0 0 25 3 644.39404 1931.16758 -0.69 49.62 6062 6062 MS2 30/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.84 0.00 0 50 25 3 644.39691 1931.17618 3.76 45.13 4632 4632 MS2 33/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.83 0.00 0 16 25 2 966.08679 1931.16631 -1.35 45.62 5393 5393 MS2 24/36 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.80 0.00 0 13 25 2 966.08539 1931.16350 -2.80 45.14 5191 5191 MS2 20/36 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.80 0.00 0 3 25 3 644.39661 1931.17527 3.29 54.22 5684 5684 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.80 0.00 0 1 25 2 966.09125 1931.17522 3.27 44.68 4536 4536 MS2 23/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.79 0.00 0 16 25 2 966.09174 1931.17620 3.77 43.64 4405 4405 MS2 24/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.77 0.00 0 3 25 2 966.09076 1931.17424 2.76 44.13 4509 4509 MS2 24/36 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.74 0.00 0 12 25 2 966.08539 1931.16350 -2.80 45.54 5485 5485 MS2 23/36 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.73 0.00 0 8 25 2 966.09180 1931.17632 3.83 43.93 4729 4729 MS2 20/36 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.71 0.00 0 12 25 2 966.08685 1931.16643 -1.29 45.58 5388 5388 MS2 23/36 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 3.70 0.00 0 1 10 3 644.39294 1931.16428 -2.40 46.18 5628 5628 MS2 36/72 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 282 3.69 0.00 1 5 4 2 846.95844 1692.90959 3.99 3.11 277 277 MS2 20/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.67 0.00 0 2 25 2 966.09210 1931.17693 4.15 51.16 5344 5344 MS2 22/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.63 0.00 0 6 25 2 966.09161 1931.17595 3.65 44.13 4598 4598 MS2 21/36 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.62 0.00 0 0 7 2 966.09143 1931.17558 3.46 48.63 7126 7126 MS2 25/36 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.60 0.00 0 28 25 2 966.08691 1931.16655 -1.22 45.49 5384 5384 MS2 23/36 Linfeng_091311_rIgG_6.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 3.56 0.00 1 18 25 3 564.97296 1692.90433 0.89 25.58 2051 2051 MS2 23/52 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 307 3.55 0.00 1 6 25 2 846.95795 1692.90862 3.42 24.71 1945 1945 MS2 21/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.52 0.00 0 12 33 3 644.39667 1931.17545 3.39 48.64 7129 7129 MS2 33/72 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.51 0.00 0 22 25 3 644.39441 1931.16867 -0.12 50.80 6213 6213 MS2 26/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.48 0.00 0 18 25 4 483.54871 1931.17299 2.11 44.26 4207 4207 MS2 40/108 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.43 0.00 0 11 25 4 483.54865 1931.17275 1.99 44.10 4345 4345 MS2 41/108 Linfeng_122411_rIgG_9.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 129 3.43 0.00 2 14 25 4 526.80298 2104.19008 1.27 34.70 3260 3260 MS2 33/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.41 0.00 0 18 25 3 644.39667 1931.17545 3.39 43.73 4657 4657 MS2 31/72 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 11 3.41 0.00 0 0 100 2 966.09314 1931.17900 5.23 55.11 7764 7764 MS2 22/36 Linfeng_20120125_PCAF_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.39 0.00 0 0 25 2 966.09052 1931.17375 2.51 48.08 4971 4971 MS2 19/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.38 0.00 0 37 25 3 644.39343 1931.16574 -1.64 58.33 6085 6085 MS2 28/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.36 0.00 0 30 25 2 966.08630 1931.16533 -1.85 46.59 5680 5680 MS2 18/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.34 0.00 0 6 25 2 966.09216 1931.17705 4.21 53.21 5579 5579 MS2 20/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 24 25 2 966.09277 1931.17827 4.85 55.32 5797 5797 MS2 17/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.28 0.00 0 14 25 2 966.09180 1931.17632 3.83 43.74 4659 4659 MS2 19/36 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.25 0.00 0 22 25 2 966.08600 1931.16472 -2.17 45.35 5522 5522 MS2 22/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.23 0.00 0 13 25 2 966.09106 1931.17485 3.08 44.20 4601 4601 MS2 21/36 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.18 0.00 0 28 25 3 644.39532 1931.17142 1.30 52.25 6382 6382 MS2 32/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.17 0.00 0 5 25 2 966.08673 1931.16619 -1.41 45.25 5383 5383 MS2 21/36 Linfeng_091311_rIgG_3.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 3.17 0.00 1 5 1 3 564.97400 1692.90744 2.72 3.08 272 272 MS2 24/52 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 541 3.16 0.00 1 8 25 2 636.84473 1272.68218 2.13 28.69 2381 2381 MS2 18/20 Linfeng_122411_rIgG_9.raw High NDEELNKLLGKVTIAQGGVLPNIQAVLLPK Unambiguous 8 1 IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.11 0.00 2 22 25 4 796.96643 3184.84389 4.19 46.64 4786 4786 MS2 37/174 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.09 0.00 0 31 25 2 966.09320 1931.17912 5.29 52.19 5465 5465 MS2 21/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 388 3.07 0.00 1 18 25 4 423.98187 1692.90566 1.67 24.37 2220 2220 MS2 30/78 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.05 0.00 0 51 25 2 966.08636 1931.16545 -1.79 45.42 5401 5401 MS2 21/36 Linfeng_091311_rIgG_4.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 477 3.01 0.00 1 6 25 2 636.84418 1272.68108 1.26 29.37 2629 2629 MS2 17/20 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 2.99 0.00 0 6 25 2 966.09113 1931.17497 3.14 50.14 5225 5225 MS2 20/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.94 0.00 1 12 25 3 564.97351 1692.90598 1.86 24.93 2055 2055 MS2 24/52 Linfeng_122411_rIgG_8.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.92 0.00 1 33 25 3 564.97455 1692.90909 3.70 24.90 1901 1901 MS2 20/52 Linfeng_122411_rIgG_9.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 367 2.91 0.00 1 29 25 4 423.98151 1692.90420 0.81 25.70 2067 2067 MS2 31/78 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 2.91 0.00 0 28 25 3 644.39441 1931.16867 -0.12 53.31 6497 6497 MS2 29/72 Linfeng_091311_rIgG_10.raw Medium VTIAQGGVLPNIQAVLLPKKTESHHK Unambiguous 8 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 40 2.89 0.00 2 13 25 4 695.40607 2778.60244 1.24 35.01 3299 3299 MS2 41/150 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.84 0.00 0 0 25 2 966.09174 1931.17620 3.77 49.13 5103 5103 MS2 15/36 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 123 2.83 0.00 2 43 25 4 526.80316 2104.19082 1.62 35.96 3420 3420 MS2 26/102 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 393 2.82 0.00 1 9 8 4 423.98175 1692.90517 1.38 3.27 290 290 MS2 24/78 Linfeng_122411_rIgG_8.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 368 2.81 0.00 1 27 25 4 423.98245 1692.90798 3.04 24.85 2046 2046 MS2 28/78 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 2.80 0.00 1 7 25 3 687.09113 2059.25882 -2.46 41.84 5079 5079 MS2 23/76 Linfeng_091311_rIgG_10.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.79 0.00 1 14 25 4 515.57233 2059.26748 1.75 40.39 3987 3987 MS2 38/114 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.76 0.00 0 23 25 2 966.09180 1931.17632 3.83 47.10 4846 4846 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.76 0.00 0 30 87 2 472.77234 944.53740 6.48 34.57 4207 4207 MS2 14/16 Linfeng_20120125_PCAF_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 2.74 0.00 0 42 25 2 966.08551 1931.16374 -2.68 45.35 5463 5463 MS2 19/36 Linfeng_091311_rIgG_2.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 484 2.74 0.00 1 20 25 2 636.84393 1272.68059 0.88 28.16 2392 2392 MS2 17/20 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 148 2.72 0.00 2 43 25 4 526.80127 2104.18325 -1.98 33.64 3123 3123 MS2 31/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.66 0.00 0 70 25 2 966.08887 1931.17046 0.80 44.14 4967 4967 MS2 18/36 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.66 0.00 1 29 25 3 564.97375 1692.90671 2.29 26.63 2189 2189 MS2 20/52 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.64 0.00 0 49 25 2 966.09161 1931.17595 3.65 56.35 5923 5923 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 11 2.63 0.00 0 0 100 2 966.09296 1931.17864 5.04 49.95 7321 7321 MS2 17/36 Linfeng_20120125_PCAF_10.raw High HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 309 2.61 0.00 1 40 25 2 846.95709 1692.90691 2.41 26.01 2108 2108 MS2 14/26 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 432 2.60 0.00 1 9 25 2 636.84119 1272.67510 -3.44 31.23 3700 3700 MS2 17/20 Linfeng_091311_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 389 2.60 0.00 1 23 2 4 423.98090 1692.90175 -0.64 3.16 286 286 MS2 28/78 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 2.55 0.00 0 0 100 2 966.09448 1931.18169 6.62 50.03 7328 7328 MS2 17/36 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 362 2.48 0.00 1 6 4 3 564.97266 1692.90342 0.35 3.23 284 284 MS2 18/52 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw Medium VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.43 0.00 0 28 25 3 644.39642 1931.17472 3.01 45.21 4642 4642 MS2 26/72 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 843 2.40 0.00 0 36 96 2 472.77194 944.53661 5.64 34.48 4185 4185 MS2 14/16 Linfeng_20120125_PCAF_1.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.37 0.00 1 13 25 3 687.09399 2059.26743 1.72 40.20 3962 3962 MS2 22/76 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 363 2.35 0.00 1 37 25 3 564.97272 1692.90360 0.45 28.17 2393 2393 MS2 18/52 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 524 2.35 0.00 1 28 25 2 636.84369 1272.68010 0.50 30.27 2677 2677 MS2 15/20 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.33 0.00 1 22 25 3 564.97278 1692.90378 0.56 24.36 2219 2219 MS2 14/52 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.32 0.00 1 38 25 3 564.97388 1692.90708 2.51 48.82 5065 5065 MS2 17/52 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.31 0.00 1 17 25 3 564.97449 1692.90891 3.59 55.02 5764 5764 MS2 20/52 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 484 2.24 0.00 1 32 100 2 636.84760 1272.68791 6.63 36.79 4379 4379 MS2 15/20 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.23 0.00 0 12 100 2 425.76959 850.53191 7.20 23.92 1924 1924 MS2 11/12 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.18 0.00 0 0 100 2 966.09204 1931.17681 4.09 55.08 7759 7759 MS2 19/36 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 465 2.15 0.00 1 19 100 2 636.84778 1272.68828 6.92 37.23 4483 4483 MS2 13/20 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 569 2.09 0.00 0 40 100 2 472.77246 944.53765 6.74 36.29 4266 4266 MS2 13/16 Linfeng_20120125_PCAF_10.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 580 2.07 0.00 0 41 100 2 472.77252 944.53777 6.87 34.47 3769 3769 MS2 13/16 Linfeng_20120125_PCAF_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 608 2.05 0.00 0 20 22 2 472.77252 944.53777 6.87 34.82 4394 4394 MS2 14/16 Linfeng_20120125_PCAF_8.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 67 2.05 0.00 0 25 100 2 425.76959 850.53191 7.20 24.93 2010 2010 MS2 11/12 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 3 IPI00018278.3;IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 591 2.02 0.00 0 14 40 2 472.77216 944.53703 6.09 46.61 6648 6648 MS2 14/16 Linfeng_20120125_PCAF_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00216493.1 Isoform 3 of Heterogeneous nuclear ribonucleoprotein H3 21.21 5 4 4 8 23.35 21.21 4 8 0.00 297 31.5 7.31 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 328 4.28 0.00 0 37 25 2 959.98456 1918.96184 -2.09 46.47 5499 5499 MS2 21/32 Linfeng_091311_rIgG_7.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 327 3.52 0.00 0 32 25 2 959.98492 1918.96257 -1.70 46.49 5509 5509 MS2 20/32 Linfeng_091311_rIgG_6.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 349 3.02 0.00 0 11 25 3 640.32605 1918.96360 -1.17 46.42 5494 5494 MS2 29/64 Linfeng_091311_rIgG_7.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 368 2.99 0.00 0 16 25 3 640.32581 1918.96286 -1.55 46.39 5497 5497 MS2 27/64 Linfeng_091311_rIgG_6.raw High GGGGSGGYYGQGGMSGGGWR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 16 2.58 0.00 0 19 25 2 902.87488 1804.74248 -1.79 28.55 3201 3201 MS2 19/38 Linfeng_091311_rIgG_7.raw High STGEAFVQFASK Unambiguous 3 1 IPI00216493.1 CID 1.0000 0.0000 1 1 279 2.48 0.00 0 6 25 2 636.31543 1271.62358 -2.45 31.90 3652 3652 MS2 19/22 Linfeng_091311_rIgG_7.raw High STGEAFVQFASK Unambiguous 3 1 IPI00216493.1 CID 1.0000 0.0000 1 1 272 2.27 0.00 0 13 25 2 636.31549 1271.62370 -2.36 31.92 3665 3665 MS2 18/22 Linfeng_091311_rIgG_6.raw High DGMDNQGGYGSVGR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 28 2.21 0.00 0 36 25 2 706.79517 1412.58306 -2.08 23.31 2486 2486 MS2 18/26 Linfeng_091311_rIgG_7.raw IPI00216592.2 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 47.78 11 9 21 87 111.88 35.49 13 38 81.18 35.49 18 29 53.61 26.28 6 20 293 32.3 5.08 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 312 5.10 0.00 0 4 25 3 561.64471 1682.91959 2.92 38.04 3991 3991 MS2 38/60 Linfeng_122411_rIgG_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 334 4.94 0.00 0 8 20 3 561.64160 1682.91025 -2.63 39.07 4582 4582 MS2 37/60 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 324 4.37 0.00 0 3 25 3 443.88971 1329.65458 -3.07 37.03 4325 4325 MS2 27/40 Linfeng_091311_rIgG_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 281 4.34 0.00 0 9 25 2 841.96375 1682.92021 3.29 38.06 3993 3993 MS2 26/30 Linfeng_122411_rIgG_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 328 4.19 0.00 0 13 25 3 561.64166 1682.91043 -2.52 39.15 4580 4580 MS2 36/60 Linfeng_091311_rIgG_7.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 297 4.10 0.00 0 25 2 841.95905 1682.91081 -2.29 39.29 4597 4597 MS2 25/30 Linfeng_091311_rIgG_7.raw High SAAEMYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 CID 1.0000 0.0000 1 1 27 4.09 0.00 0 0 100 2 1051.45117 2101.89507 6.77 48.14 7025 7025 MS2 25/34 Linfeng_20120125_PCAF_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 302 3.97 0.00 0 23 25 2 841.95850 1682.90972 -2.94 39.08 4583 4583 MS2 26/30 Linfeng_091311_rIgG_6.raw High EAEEGEDDRDSANGEDDS Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 1 3.75 0.00 1 15 25 2 970.34937 1939.69145 0.30 15.36 1416 1416 MS2 20/34 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.73 0.00 1 10 25 3 367.54764 1100.62836 -2.45 22.68 2398 2398 MS2 23/36 Linfeng_091311_rIgG_7.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 287 3.52 0.00 0 3 4 2 841.96393 1682.92058 3.51 48.52 7132 7132 MS2 25/30 Linfeng_20120125_PCAF_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.44 0.00 1 11 25 3 367.54770 1100.62854 -2.29 22.55 2408 2408 MS2 21/36 Linfeng_091311_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 440 3.41 0.00 1 4 21 3 472.59454 1415.76908 -3.55 33.01 3808 3808 MS2 20/44 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 334 3.36 0.00 0 4 22 2 665.33362 1329.65996 0.98 35.98 3732 3732 MS2 17/20 Linfeng_122411_rIgG_6.raw High IVGcSVHKGFAFVQYVNER Unambiguous 6 1 IPI00216592.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 3.34 0.00 1 19 25 4 553.28577 2210.12124 1.64 31.81 3208 3208 MS2 34/108 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 461 3.33 0.00 1 5 18 3 472.59631 1415.77439 0.20 32.08 3243 3243 MS2 22/44 Linfeng_122411_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 321 3.20 0.00 0 13 25 2 665.33350 1329.65972 0.79 34.60 2993 2993 MS2 17/20 Linfeng_122411_rIgG_7.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 3.18 0.00 1 9 25 3 472.59464 1415.76935 -3.35 33.13 3814 3814 MS2 20/44 Linfeng_091311_rIgG_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 318 3.12 0.00 0 4 7 2 665.32996 1329.65264 -4.53 36.93 4311 4311 MS2 17/20 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 338 3.05 0.00 0 11 16 3 443.89166 1329.66043 1.33 36.08 3745 3745 MS2 27/40 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 129 3.05 0.00 0 5 22 3 439.60141 1316.78968 -3.06 38.56 4519 4519 MS2 27/44 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 319 3.04 0.00 0 11 13 2 665.33002 1329.65276 -4.44 36.97 4304 4304 MS2 17/20 Linfeng_091311_rIgG_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 394 3.01 0.00 0 42 100 2 665.33728 1329.66728 6.48 47.24 6808 6808 MS2 17/20 Linfeng_20120125_PCAF_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 379 2.95 0.00 1 7 15 3 375.20358 1123.59620 -2.87 27.85 3126 3126 MS2 23/36 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 2.93 0.00 1 76 25 3 367.54758 1100.62818 -2.62 22.64 2459 2459 MS2 19/36 Linfeng_091311_rIgG_8.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 95 2.93 0.00 0 1 25 3 439.60367 1316.79645 2.08 37.44 3915 3915 MS2 29/44 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.91 0.00 1 21 25 3 472.59464 1415.76935 -3.35 33.17 3882 3882 MS2 16/44 Linfeng_091311_rIgG_8.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 112 2.90 0.00 1 19 25 3 518.56909 1553.69272 0.07 11.20 895 895 MS2 25/52 Linfeng_091311_rIgG_6.raw High VDSLLENLEKIEKEQSK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 361 2.88 0.00 2 5 25 3 668.02954 2002.07407 1.85 37.68 3945 3945 MS2 26/64 Linfeng_122411_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 406 2.88 0.00 0 9 71 2 665.33740 1329.66753 6.67 46.34 6592 6592 MS2 17/20 Linfeng_20120125_PCAF_6.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 311 2.83 0.00 2 5 0 3 410.24725 1228.72721 0.96 3.29 318 318 MS2 24/40 Linfeng_122411_rIgG_6.raw High KSDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 474 2.82 0.00 2 8 25 3 491.26559 1471.78223 2.07 28.87 2824 2824 MS2 30/48 Linfeng_122411_rIgG_6.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 116 2.81 0.00 1 14 25 2 777.35126 1553.69524 1.69 11.23 900 900 MS2 21/26 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 362 2.81 0.00 1 10 25 3 375.20529 1123.60132 1.69 26.16 2462 2462 MS2 25/36 Linfeng_122411_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 386 2.79 0.00 0 35 100 2 665.33691 1329.66655 5.93 47.12 6780 6780 MS2 17/20 Linfeng_20120125_PCAF_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.78 0.00 0 3 3 2 658.90326 1316.79924 4.20 48.52 7131 7131 MS2 20/22 Linfeng_20120125_PCAF_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 406 2.77 0.00 0 40 100 2 665.33752 1329.66777 6.85 47.05 6761 6761 MS2 17/20 Linfeng_20120125_PCAF_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 99 2.75 0.00 0 14 25 2 658.90125 1316.79521 1.14 36.95 3288 3288 MS2 20/22 Linfeng_122411_rIgG_7.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 322 2.75 0.00 2 16 25 3 410.24585 1228.72300 -2.47 19.68 1986 1986 MS2 22/40 Linfeng_091311_rIgG_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 366 2.75 0.00 0 38 100 2 665.33716 1329.66704 6.30 47.11 6776 6776 MS2 17/20 Linfeng_20120125_PCAF_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 520 2.75 0.00 0 7 25 2 580.31030 1159.61333 -6.23 35.55 4135 4135 MS2 16/18 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 391 2.74 0.00 0 27 100 2 665.33710 1329.66692 6.21 45.91 6292 6292 MS2 17/20 Linfeng_20120125_PCAF_4.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 2.72 0.00 0 21 25 2 430.22852 859.44975 -2.64 22.63 2418 2418 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.70 0.00 0 4 2 2 658.89856 1316.78984 -2.94 38.55 4517 4517 MS2 20/22 Linfeng_091311_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 573 2.69 0.00 0 13 25 2 580.31134 1159.61540 -4.44 35.61 4132 4132 MS2 16/18 Linfeng_091311_rIgG_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 375 2.68 0.00 0 2 100 2 665.33765 1329.66802 7.04 45.94 6004 6004 MS2 17/20 Linfeng_20120125_PCAF_7.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 133 2.67 0.00 1 2 25 3 518.57104 1553.69858 3.84 3.03 283 283 MS2 25/52 Linfeng_122411_rIgG_6.raw Medium QKVDSLLENLEKIEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 290 2.64 0.00 2 8 25 4 447.25504 1785.99831 1.44 35.77 3706 3706 MS2 29/84 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.63 0.00 0 3 6 2 658.89728 1316.78728 -4.88 38.61 4510 4510 MS2 20/22 Linfeng_091311_rIgG_7.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 113 2.62 0.00 1 6 24 3 518.56903 1553.69254 -0.05 2.44 214 214 MS2 24/52 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.62 0.00 0 8 25 2 658.90186 1316.79643 2.07 37.62 3938 3938 MS2 19/22 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 386 2.62 0.00 0 21 25 2 430.22986 859.45244 0.49 4.62 516 516 MS2 13/14 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 373 2.61 0.00 1 8 25 3 375.20346 1123.59583 -3.20 27.91 3113 3113 MS2 22/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 92 2.61 0.00 0 16 25 2 658.90222 1316.79717 2.62 37.46 3611 3611 MS2 18/22 Linfeng_122411_rIgG_10.raw High GDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 429 2.61 0.00 1 8 6 2 494.27747 987.54766 0.67 3.30 319 319 MS2 15/16 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 578 2.60 0.00 0 32 25 2 580.31506 1159.62285 1.98 31.39 2588 2588 MS2 16/18 Linfeng_122411_rIgG_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 395 2.59 0.00 0 40 100 2 665.33801 1329.66875 7.59 45.32 6343 6343 MS2 17/20 Linfeng_20120125_PCAF_6.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 323 2.56 0.00 2 34 25 3 410.24576 1228.72272 -2.69 20.69 2157 2157 MS2 19/40 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 380 2.55 0.00 0 3 100 2 665.33838 1329.66948 8.14 48.46 7074 7074 MS2 17/20 Linfeng_20120125_PCAF_10.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 313 2.53 0.00 0 34 25 2 665.33087 1329.65447 -3.15 36.95 4453 4453 MS2 17/20 Linfeng_091311_rIgG_10.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 328 2.51 0.00 1 7 10 2 562.30157 1123.59587 -3.16 27.85 3125 3125 MS2 14/18 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 80 2.49 0.00 0 27 25 2 658.90295 1316.79863 3.74 54.28 5899 5899 MS2 14/22 Linfeng_122411_rIgG_6.raw High SDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 345 2.49 0.00 1 26 25 2 672.34662 1343.68596 1.30 31.82 3209 3209 MS2 18/22 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 8 25 2 658.89819 1316.78911 -3.49 38.59 4664 4664 MS2 18/22 Linfeng_091311_rIgG_10.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 358 2.46 0.00 1 1 60 2 562.30707 1123.60686 6.62 29.82 2781 2781 MS2 14/18 Linfeng_20120125_PCAF_6.raw Medium LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 324 2.44 0.00 2 19 25 3 410.24609 1228.72373 -1.87 19.54 1998 1998 MS2 22/40 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 385 2.44 0.00 0 19 100 2 665.33783 1329.66838 7.31 45.50 5897 5897 MS2 17/20 Linfeng_20120125_PCAF_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 371 2.43 0.00 0 35 100 2 665.33710 1329.66692 6.21 46.99 6747 6747 MS2 17/20 Linfeng_20120125_PCAF_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.36 0.00 0 8 25 2 658.89771 1316.78813 -4.24 38.64 4517 4517 MS2 19/22 Linfeng_091311_rIgG_9.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 385 2.36 0.00 0 23 100 2 665.33813 1329.66899 7.77 45.81 5958 5958 MS2 17/20 Linfeng_20120125_PCAF_3.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 98 2.32 0.00 0 0 25 2 598.76727 1196.52727 -0.41 6.48 538 538 MS2 16/20 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 387 2.31 0.00 0 20 100 2 665.33795 1329.66863 7.49 46.18 6357 6357 MS2 16/20 Linfeng_20120125_PCAF_4.raw High VFIGNLNTLVVKK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 35 2.27 0.00 1 11 25 2 722.94958 1444.89189 2.22 33.29 3398 3398 MS2 15/24 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.24 0.00 0 59 25 2 430.22852 859.44975 -2.64 22.71 2402 2402 MS2 13/14 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.23 0.00 0 36 25 2 658.90192 1316.79656 2.16 37.27 3730 3730 MS2 16/22 Linfeng_122411_rIgG_2.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 549 2.21 0.00 0 20 100 2 580.31537 1159.62346 2.51 43.43 5879 5879 MS2 13/18 Linfeng_20120125_PCAF_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 276 2.20 0.00 0 4 13 2 498.25635 995.50542 0.97 30.15 2993 2993 MS2 15/16 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 523 2.17 0.00 0 39 100 2 580.31744 1159.62761 6.09 43.07 5299 5299 MS2 13/18 Linfeng_20120125_PCAF_7.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 299 2.13 0.00 2 4 7 2 614.86749 1228.72771 1.37 3.30 320 320 MS2 18/20 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 331 2.12 0.00 1 14 25 2 562.30176 1123.59624 -2.83 27.81 3099 3099 MS2 13/18 Linfeng_091311_rIgG_7.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 111 2.10 0.00 0 34 25 2 598.77051 1196.53374 5.00 3.15 297 297 MS2 16/20 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 88 2.09 0.00 0 48 25 2 658.90179 1316.79631 1.98 48.18 5259 5259 MS2 14/22 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 355 2.08 0.00 1 11 9 2 562.30353 1123.59978 0.32 26.25 2474 2474 MS2 14/18 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 537 2.06 0.00 0 27 100 2 580.31769 1159.62810 6.51 42.40 5629 5629 MS2 11/18 Linfeng_20120125_PCAF_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 308 2.04 0.00 0 21 25 2 665.33093 1329.65459 -3.06 37.14 4323 4323 MS2 17/20 Linfeng_091311_rIgG_9.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 111 2.02 0.00 0 0 25 2 598.76770 1196.52812 0.30 5.47 468 468 MS2 16/20 Linfeng_091311_rIgG_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 300 2.01 0.00 0 2 22 2 498.25476 995.50224 -2.22 31.60 3612 3612 MS2 13/16 Linfeng_091311_rIgG_7.raw IPI00216695.1 Isoform 2 of Tyrosine-protein kinase BAZ1B 13.93 2 16 16 25 34.21 8.79 10 11 26.78 6.96 9 9 11.67 4.19 4 5 1479 170.3 8.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KSDGAcDSPSSDKENSSQIAQDHQK Unambiguous 2 1 IPI00216695.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 65 5.51 0.00 2 3 25 4 680.55219 2719.18691 0.29 15.28 1419 1419 MS2 47/144 Linfeng_091311_rIgG_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 332 4.31 0.00 0 30 25 2 921.96948 1842.93169 0.19 50.12 6068 6068 MS2 22/28 Linfeng_091311_rIgG_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 343 3.73 0.00 0 66 25 2 921.96893 1842.93059 -0.41 50.19 6004 6004 MS2 22/28 Linfeng_091311_rIgG_3.raw High GGLGYVEETSEFEAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 157 3.65 0.00 0 3 25 2 822.38306 1643.75884 2.44 32.24 3094 3094 MS2 22/28 Linfeng_122411_rIgG_2.raw High YQDIIHSIHLAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 411 3.49 0.00 0 12 25 4 367.20377 1465.79323 1.48 30.45 2860 2860 MS2 37/66 Linfeng_122411_rIgG_2.raw High YQDIIHSIHLAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 468 3.33 0.00 0 10 25 4 367.20203 1465.78628 -3.26 31.63 3690 3690 MS2 32/66 Linfeng_091311_rIgG_2.raw High LQNEDKIISNVPADSLIR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 271 3.31 0.00 1 23 25 3 675.70569 2025.10251 2.43 32.43 3118 3118 MS2 25/68 Linfeng_122411_rIgG_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 350 3.08 0.00 0 26 25 2 921.97290 1842.93852 3.90 49.04 5223 5223 MS2 22/28 Linfeng_122411_rIgG_2.raw High ScDGNQELLNFLR Unambiguous 2 1 IPI00216695.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 232 3.01 0.00 0 16 25 2 783.37421 1565.74114 2.17 40.24 4105 4105 MS2 20/24 Linfeng_122411_rIgG_2.raw High FSDFLLDPYK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 320 2.97 0.00 0 22 25 2 622.81171 1244.61614 -2.95 40.50 4849 4849 MS2 16/18 Linfeng_091311_rIgG_2.raw High TEQcLVALLHK Unambiguous 2 1 IPI00216695.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.80 0.00 0 11 25 3 437.90836 1311.71051 1.17 30.95 2926 2926 MS2 24/40 Linfeng_122411_rIgG_2.raw High TDNSSLSSPLNPK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 8 25 2 680.33734 1359.66741 -5.66 25.76 2893 2893 MS2 18/24 Linfeng_091311_rIgG_2.raw High SDLIEVATR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 607 2.72 0.00 0 20 25 2 502.27536 1003.54344 1.54 27.09 2414 2414 MS2 15/16 Linfeng_122411_rIgG_2.raw High FSDFLLDPYK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 357 2.60 0.00 0 31 25 2 622.81488 1244.62248 2.15 39.53 4015 4015 MS2 15/18 Linfeng_122411_rIgG_2.raw High APPVDDAEVDELVLQTK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 337 2.58 0.00 0 54 100 3 613.64624 1838.92417 -7.69 44.40 6556 6556 MS2 21/64 Linfeng_20120125_PCAF_1.raw Medium TEQcLVALLHK Unambiguous 2 1 IPI00216695.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 428 2.43 0.00 0 3 25 3 437.90576 1311.70273 -4.77 32.30 3778 3778 MS2 17/40 Linfeng_091311_rIgG_2.raw Medium APPVDDAEVDELVLQTK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 335 2.43 0.00 0 84 25 3 613.64960 1838.93424 -2.21 37.52 4462 4462 MS2 25/64 Linfeng_091311_rIgG_2.raw High GGLGYVEETSEFEAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 175 2.40 0.00 0 26 100 2 822.38684 1643.76641 7.04 38.26 5097 5097 MS2 19/28 Linfeng_20120125_PCAF_1.raw High YAVGEEcDFEVGK Unambiguous 2 1 IPI00216695.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 2.32 0.00 0 38 100 2 751.83173 1502.65618 6.20 31.62 3489 3489 MS2 18/24 Linfeng_20120125_PCAF_1.raw Medium GWVHDSIDYR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 191 2.27 0.00 0 25 25 3 416.53040 1247.57663 -3.02 27.38 3115 3115 MS2 19/36 Linfeng_091311_rIgG_2.raw High AFQEGIAK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 393 2.24 0.00 0 22 25 2 432.23325 863.45922 -3.45 21.14 2243 2243 MS2 13/14 Linfeng_091311_rIgG_2.raw High SDLIEVATR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 566 2.23 0.00 0 25 25 2 502.27304 1003.53880 -3.09 29.42 3393 3393 MS2 15/16 Linfeng_091311_rIgG_2.raw High YAVGEEcDFEVGK Unambiguous 2 1 IPI00216695.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 2.22 0.00 0 47 100 2 751.83154 1502.65581 5.96 31.57 3476 3476 MS2 17/24 Linfeng_20120125_PCAF_1.raw High AGTGENAPWVVEDELVK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 310 2.16 0.00 0 12 100 2 907.45850 1813.90972 7.14 46.07 6958 6958 MS2 15/32 Linfeng_20120125_PCAF_1.raw High IISNVPADSLIR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 264 2.12 0.00 0 29 25 2 649.37878 1297.75029 2.16 30.85 2914 2914 MS2 16/22 Linfeng_122411_rIgG_2.raw IPI00216730.3 Histone H2A type 2-B 57.69 1 2 4 37 0.00 102.81 57.69 4 37 130 14.0 10.89 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 111 5.62 0.00 0 3 25 3 972.53668 2915.59549 2.63 56.94 4866 4866 MS2 37/112 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 110 5.22 0.00 0 11 25 4 729.65460 2915.59658 3.00 56.95 4867 4867 MS2 53/168 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 118 4.94 0.00 0 29 25 4 729.65344 2915.59194 1.41 57.26 6002 6002 MS2 44/168 Linfeng_122411_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00216730.3 CID 1.0000 0.0000 1 1 9 4.84 0.00 0 12 25 3 757.80029 2271.38633 2.79 47.54 4785 4785 MS2 36/88 Linfeng_122411_rIgG_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 117 4.37 0.00 0 17 25 4 729.65350 2915.59218 1.49 57.24 5691 5691 MS2 47/168 Linfeng_122411_rIgG_7.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00216730.3 CID 1.0000 0.0000 1 1 117 3.78 0.00 0 13 25 3 972.53644 2915.59476 2.38 57.25 5692 5692 MS2 31/112 Linfeng_122411_rIgG_7.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00216730.3 CID 1.0000 0.0000 1 1 7 3.61 0.00 0 26 25 4 568.60199 2271.38613 2.70 47.72 4925 4925 MS2 35/132 Linfeng_122411_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00216730.3 CID 1.0000 0.0000 1 1 9 3.46 0.00 0 12 25 3 757.80035 2271.38651 2.87 47.50 4897 4897 MS2 37/88 Linfeng_122411_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00216730.3 CID 1.0000 0.0000 1 1 6 2.84 0.00 0 0 25 2 1136.19812 2271.38896 3.95 47.59 4908 4908 MS2 19/44 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00216730.3 CID 1.0000 0.0000 1 1 7 2.40 0.00 0 0 25 2 1136.19849 2271.38970 4.27 47.76 4813 4813 MS2 14/44 Linfeng_122411_rIgG_9.raw Medium HLQLAVRNDEELNK Unambiguous 1 1 IPI00216730.3 CID 1.0000 0.0000 1 1 419 2.39 0.00 1 24 25 3 560.30194 1678.89127 2.44 22.85 1751 1751 MS2 17/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00018278.3;IPI00026272.2;IPI00216457.7;IPI00216730.3 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00217240.1 WD repeat-containing protein 75 8.67 1 5 5 8 8.14 4.94 3 3 14.97 6.99 4 5 830 94.4 5.96 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DVPESFTSEAYQWLNR Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 197 3.54 0.00 0 22 25 3 647.97290 1941.90415 3.27 44.65 4774 4774 MS2 29/60 Linfeng_122411_rIgG_4.raw High QLLAEESLPTTPFYFILGK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 172 3.41 0.00 0 8 25 2 1084.09167 2167.17607 3.44 49.98 5341 5341 MS2 19/36 Linfeng_122411_rIgG_3.raw High ELSFVLDYINQSPK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 391 3.32 0.00 0 19 25 2 826.92920 1652.85112 -1.18 43.41 5153 5153 MS2 22/26 Linfeng_091311_rIgG_3.raw High LWDYIDGILIK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 290 2.80 0.00 0 34 25 2 674.88080 1348.75432 2.33 43.83 4670 4670 MS2 17/20 Linfeng_122411_rIgG_4.raw High QLLAEESLPTTPFYFILGK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 251 2.64 0.00 0 33 25 3 723.06348 2167.17588 3.35 49.88 5328 5328 MS2 19/72 Linfeng_122411_rIgG_3.raw High DVPESFTSEAYQWLNR Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 171 2.64 0.00 0 41 25 3 647.97040 1941.89664 -0.60 45.79 5448 5448 MS2 21/60 Linfeng_091311_rIgG_4.raw High EKPDIFQLVSVK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 291 2.58 0.00 0 17 25 3 468.27094 1402.79825 2.95 36.18 3708 3708 MS2 21/44 Linfeng_122411_rIgG_4.raw High LWDYIDGILIK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 315 2.18 0.00 0 37 25 2 674.87854 1348.74980 -1.01 44.98 5349 5349 MS2 18/20 Linfeng_091311_rIgG_3.raw IPI00217465.5 Histone H1.2 25.35 5 8 9 98 92.17 25.35 9 37 73.00 15.96 5 29 95.32 10.80 4 32 213 21.4 10.93 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 209 4.29 0.00 1 7 53 3 442.92844 1326.77076 5.99 28.41 2720 2720 MS2 30/48 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 215 4.14 0.00 1 3 98 3 442.92819 1326.77002 5.44 27.98 2188 2188 MS2 27/48 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 213 4.08 0.00 1 6 66 3 442.92850 1326.77094 6.13 27.39 2482 2482 MS2 30/48 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 215 4.05 0.00 1 6 62 3 442.92834 1326.77048 5.78 27.33 2466 2466 MS2 27/48 Linfeng_20120125_PCAF_1.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 408 3.91 0.00 1 6 25 3 412.55789 1235.65912 -3.21 21.51 2237 2237 MS2 30/44 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 214 3.83 0.00 1 6 100 3 442.92841 1326.77066 5.92 28.79 2313 2313 MS2 29/48 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 212 3.73 0.00 1 3 100 3 442.92880 1326.77185 6.82 27.83 2163 2163 MS2 27/48 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 212 3.63 0.00 1 4 100 3 442.92865 1326.77140 6.47 27.92 2180 2180 MS2 27/48 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 312 3.60 0.00 1 22 25 3 442.92526 1326.76123 -1.19 24.46 2232 2232 MS2 28/48 Linfeng_122411_rIgG_6.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 372 3.59 0.00 1 0 25 2 618.33301 1235.65874 -3.52 21.55 2242 2242 MS2 19/22 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 245 3.56 0.00 1 9 25 2 663.88226 1326.75725 -4.19 26.35 2964 2964 MS2 20/24 Linfeng_091311_rIgG_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 245 3.55 0.00 1 34 25 2 663.88220 1326.75713 -4.28 26.11 2866 2866 MS2 19/24 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 245 3.53 0.00 1 0 100 2 663.89008 1326.77287 7.58 28.32 2245 2245 MS2 20/24 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 258 3.52 0.00 1 9 7 3 442.92398 1326.75739 -4.09 3.97 424 424 MS2 26/48 Linfeng_122411_rIgG_2.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 241 3.50 0.00 1 1 100 2 663.89008 1326.77287 7.58 28.27 2238 2238 MS2 20/24 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 206 3.39 0.00 1 4 100 2 663.88879 1326.77031 5.65 27.49 2112 2112 MS2 20/24 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 246 3.32 0.00 1 37 25 2 663.88574 1326.76421 1.05 24.37 2221 2221 MS2 17/24 Linfeng_122411_rIgG_6.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 241 3.31 0.00 1 1 100 2 663.89001 1326.77275 7.49 28.40 2256 2256 MS2 20/24 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 212 3.30 0.00 1 7 67 2 663.88861 1326.76995 5.38 27.10 2413 2413 MS2 19/24 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 263 3.14 0.00 1 7 8 3 442.92404 1326.75757 -3.95 4.32 498 498 MS2 26/48 Linfeng_122411_rIgG_4.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 227 3.11 0.00 1 11 100 2 663.88788 1326.76848 4.27 26.75 2325 2325 MS2 19/24 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 209 3.11 0.00 1 15 100 2 663.88861 1326.76995 5.38 28.86 2827 2827 MS2 17/24 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 232 3.09 0.00 1 13 100 2 663.88800 1326.76872 4.46 26.66 2304 2304 MS2 19/24 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 298 3.07 0.00 1 22 25 3 442.92255 1326.75309 -7.33 26.00 2851 2851 MS2 28/48 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 251 2.99 0.00 1 11 25 2 663.88226 1326.75725 -4.19 30.50 3467 3467 MS2 18/24 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 297 2.81 0.00 1 19 25 3 442.92267 1326.75345 -7.05 26.18 2941 2941 MS2 25/48 Linfeng_091311_rIgG_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 212 2.77 0.00 1 14 100 2 663.88892 1326.77056 5.84 25.92 2133 2133 MS2 18/24 Linfeng_20120125_PCAF_1.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 395 2.75 0.00 1 52 25 3 412.55826 1235.66022 -2.32 19.69 1757 1757 MS2 20/44 Linfeng_091311_rIgG_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 390 2.74 0.00 0 7 25 2 554.28839 1107.56951 1.25 22.21 1936 1936 MS2 18/20 Linfeng_122411_rIgG_6.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 201 2.71 0.00 1 26 100 2 663.88934 1326.77141 6.48 28.78 2604 2604 MS2 17/24 Linfeng_20120125_PCAF_6.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 316 2.70 0.00 0 21 25 2 599.83923 1198.67119 2.79 28.32 2550 2550 MS2 14/22 Linfeng_122411_rIgG_3.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 240 2.68 0.00 1 15 100 2 663.88995 1326.77263 7.40 26.47 1977 1977 MS2 15/24 Linfeng_20120125_PCAF_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 400 2.67 0.00 0 5 25 2 599.83850 1198.66973 1.57 25.66 1988 1988 MS2 13/22 Linfeng_122411_rIgG_9.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 231 2.66 0.00 1 27 100 2 663.88757 1326.76787 3.81 26.53 2270 2270 MS2 19/24 Linfeng_20120125_PCAF_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 373 2.63 0.00 0 6 0 2 554.28534 1107.56340 -4.26 24.96 2713 2713 MS2 18/20 Linfeng_091311_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 412 2.55 0.00 0 36 25 2 554.28925 1107.57121 2.79 23.78 1702 1702 MS2 16/20 Linfeng_122411_rIgG_1.raw High SGVSLAALKK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 166 2.54 0.00 1 10 6 2 487.30368 973.60008 -4.14 24.40 2636 2636 MS2 16/18 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 250 2.53 0.00 1 23 100 2 663.88983 1326.77239 7.22 29.41 2407 2407 MS2 15/24 Linfeng_20120125_PCAF_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 211 2.52 0.00 1 22 100 2 663.88892 1326.77056 5.84 26.01 2153 2153 MS2 17/24 Linfeng_20120125_PCAF_1.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 358 2.51 0.00 0 20 25 2 599.83838 1198.66948 1.37 28.84 2819 2819 MS2 14/22 Linfeng_122411_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 375 2.51 0.00 0 15 25 2 423.25940 845.51152 2.82 25.99 2239 2239 MS2 15/16 Linfeng_122411_rIgG_3.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 207 2.50 0.00 1 31 100 2 663.88898 1326.77068 5.93 25.55 2057 2057 MS2 16/24 Linfeng_20120125_PCAF_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 420 2.50 0.00 0 40 25 2 554.28882 1107.57036 2.02 24.79 1853 1853 MS2 16/20 Linfeng_122411_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 417 2.49 0.00 0 5 25 2 423.25885 845.51042 1.52 4.83 525 525 MS2 15/16 Linfeng_122411_rIgG_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 204 2.48 0.00 1 25 100 2 663.88934 1326.77141 6.48 29.11 2490 2490 MS2 16/24 Linfeng_20120125_PCAF_2.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 368 2.48 0.00 0 4 9 2 554.28558 1107.56389 -3.82 24.57 2427 2427 MS2 18/20 Linfeng_091311_rIgG_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 428 2.47 0.00 0 27 25 2 554.28925 1107.57121 2.79 23.72 1760 1760 MS2 16/20 Linfeng_122411_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 210 2.47 0.00 1 40 100 2 663.88910 1326.77092 6.11 29.33 2938 2938 MS2 16/24 Linfeng_20120125_PCAF_1.raw Medium KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 263 2.46 0.00 1 23 15 3 442.92392 1326.75721 -4.22 4.10 443 443 MS2 26/48 Linfeng_122411_rIgG_3.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 276 2.45 0.00 0 15 25 2 599.83887 1198.67046 2.18 28.27 2687 2687 MS2 15/22 Linfeng_122411_rIgG_4.raw Medium AKKPAAATVTK Unambiguous 1 1 IPI00217465.5 CID 1.0000 0.0000 1 1 226 2.44 0.00 1 60 25 3 362.56067 1085.66745 -0.30 2.37 195 195 MS2 19/40 Linfeng_091311_rIgG_6.raw High KPAAATVTK Unambiguous 1 1 IPI00217465.5 CID 1.0000 0.0000 1 1 325 2.42 0.00 0 5 25 2 443.77130 886.53533 -0.41 0.79 66 66 MS2 12/16 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 211 2.42 0.00 1 26 100 2 663.88885 1326.77043 5.74 29.18 2904 2904 MS2 17/24 Linfeng_20120125_PCAF_1.raw Medium KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 412 2.42 0.00 1 38 25 3 412.55795 1235.65931 -3.06 21.63 2283 2283 MS2 18/44 Linfeng_091311_rIgG_6.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 367 2.41 0.00 0 9 25 2 554.28571 1107.56413 -3.60 24.87 2699 2699 MS2 18/20 Linfeng_091311_rIgG_9.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 421 2.41 0.00 0 19 25 2 423.25888 845.51048 1.59 4.41 462 462 MS2 15/16 Linfeng_122411_rIgG_9.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 362 2.41 0.00 0 9 25 2 554.28558 1107.56389 -3.82 24.83 2757 2757 MS2 18/20 Linfeng_091311_rIgG_8.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 285 2.40 0.00 0 4 100 2 599.84070 1198.67412 5.24 31.65 3495 3495 MS2 14/22 Linfeng_20120125_PCAF_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 377 2.40 0.00 0 2 25 2 554.28571 1107.56413 -3.60 24.79 2806 2806 MS2 18/20 Linfeng_091311_rIgG_10.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 389 2.40 0.00 0 15 25 2 599.83844 1198.66960 1.47 27.39 2374 2374 MS2 15/22 Linfeng_122411_rIgG_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 361 2.38 0.00 0 6 25 2 554.28607 1107.56487 -2.94 24.73 2708 2708 MS2 18/20 Linfeng_091311_rIgG_4.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 421 2.35 0.00 0 16 25 2 423.25882 845.51036 1.44 26.23 2416 2416 MS2 15/16 Linfeng_122411_rIgG_4.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 356 2.34 0.00 0 8 25 2 554.28369 1107.56011 -7.24 26.90 2973 2973 MS2 17/20 Linfeng_091311_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 363 2.33 0.00 0 37 25 2 599.83789 1198.66850 0.55 28.03 2540 2540 MS2 15/22 Linfeng_122411_rIgG_2.raw High SGVSLAALKK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 130 2.33 0.00 1 9 16 2 487.30576 973.60423 0.13 3.41 336 336 MS2 16/18 Linfeng_122411_rIgG_2.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 387 2.32 0.00 0 13 24 2 554.28540 1107.56352 -4.15 24.68 2743 2743 MS2 18/20 Linfeng_091311_rIgG_2.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 246 2.32 0.00 1 21 25 2 663.88226 1326.75725 -4.19 26.25 2652 2652 MS2 13/24 Linfeng_091311_rIgG_1.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 289 2.30 0.00 0 4 2 2 599.83679 1198.66631 -1.28 0.01 2 2 MS2 17/22 Linfeng_122411_rIgG_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 429 2.30 0.00 0 10 25 2 423.25861 845.50994 0.94 27.13 2593 2593 MS2 15/16 Linfeng_122411_rIgG_6.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 219 2.28 0.00 1 30 100 2 663.88843 1326.76958 5.10 26.15 2183 2183 MS2 18/24 Linfeng_20120125_PCAF_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 396 2.26 0.00 0 60 25 2 554.28912 1107.57097 2.57 51.24 5066 5066 MS2 14/20 Linfeng_122411_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 384 2.24 0.00 0 29 25 2 599.83606 1198.66484 -2.50 29.98 3395 3395 MS2 14/22 Linfeng_091311_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 17 25 2 423.25635 845.50542 -4.40 28.78 3365 3365 MS2 15/16 Linfeng_091311_rIgG_10.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.23 0.00 0 11 25 2 423.25717 845.50707 -2.45 28.67 3255 3255 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 366 2.22 0.00 0 8 25 2 554.28589 1107.56450 -3.27 24.98 2740 2740 MS2 18/20 Linfeng_091311_rIgG_6.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 285 2.22 0.00 0 5 7 2 599.84106 1198.67485 5.85 32.67 3743 3743 MS2 17/22 Linfeng_20120125_PCAF_1.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 211 2.21 0.00 1 35 100 2 663.88892 1326.77056 5.84 29.24 2918 2918 MS2 16/24 Linfeng_20120125_PCAF_1.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 334 2.21 0.00 0 8 1 2 599.83820 1198.66911 1.06 3.08 272 272 MS2 15/22 Linfeng_122411_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 354 2.21 0.00 0 19 25 2 554.28607 1107.56487 -2.94 24.67 2706 2706 MS2 18/20 Linfeng_091311_rIgG_3.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 466 2.21 0.00 0 51 25 2 423.25696 845.50664 -2.96 28.74 3258 3258 MS2 15/16 Linfeng_091311_rIgG_4.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 564 2.19 0.00 0 23 100 2 423.26086 845.51445 6.28 29.18 2905 2905 MS2 14/16 Linfeng_20120125_PCAF_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 327 2.18 0.00 0 11 8 2 554.28772 1107.56816 0.04 3.25 286 286 MS2 16/20 Linfeng_122411_rIgG_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 212 2.17 0.00 1 41 100 2 663.88898 1326.77068 5.93 30.56 3235 3235 MS2 16/24 Linfeng_20120125_PCAF_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 494 2.16 0.00 0 2 11 2 423.25662 845.50597 -3.75 28.85 3305 3305 MS2 15/16 Linfeng_091311_rIgG_8.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 464 2.16 0.00 0 8 25 2 423.25677 845.50627 -3.39 34.25 3957 3957 MS2 15/16 Linfeng_091311_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 415 2.14 0.00 0 75 25 2 554.28900 1107.57073 2.35 47.85 4660 4660 MS2 15/20 Linfeng_122411_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 467 2.13 0.00 0 15 25 2 423.25705 845.50682 -2.74 28.70 3296 3296 MS2 15/16 Linfeng_091311_rIgG_2.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 358 2.13 0.00 0 22 25 2 554.28644 1107.56560 -2.28 24.91 2677 2677 MS2 17/20 Linfeng_091311_rIgG_5.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 484 2.12 0.00 0 24 25 2 423.25647 845.50566 -4.11 28.73 2989 2989 MS2 15/16 Linfeng_091311_rIgG_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.11 0.00 0 8 25 2 423.25699 845.50670 -2.89 28.83 3239 3239 MS2 15/16 Linfeng_091311_rIgG_7.raw High GTGASGSFK Unambiguous 6 2 IPI00217465.5;IPI00217468.3 CID 1.0000 0.0000 1 1 108 2.10 0.00 0 32 25 2 406.19971 811.39214 -2.91 13.39 1151 1151 MS2 10/16 Linfeng_091311_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 378 2.08 0.00 0 21 25 2 423.25940 845.51152 2.82 25.64 2219 2219 MS2 15/16 Linfeng_122411_rIgG_2.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 457 2.07 0.00 0 25 25 2 423.25735 845.50743 -2.02 28.96 3224 3224 MS2 15/16 Linfeng_091311_rIgG_5.raw High KPAAATVTK Unambiguous 1 1 IPI00217465.5 CID 1.0000 0.0000 1 1 329 2.06 0.00 0 3 25 2 443.77155 886.53581 0.14 1.27 110 110 MS2 12/16 Linfeng_091311_rIgG_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 445 2.05 0.00 0 59 25 2 554.28888 1107.57048 2.13 28.59 2249 2249 MS2 13/20 Linfeng_122411_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 311 2.04 0.00 0 25 25 2 599.83923 1198.67119 2.79 24.65 1874 1874 MS2 14/22 Linfeng_122411_rIgG_9.raw High SGVSLAALKK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 159 2.03 0.00 1 12 100 2 487.30878 973.61028 6.33 27.46 2497 2497 MS2 13/18 Linfeng_20120125_PCAF_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.01 0.00 0 19 25 2 423.25723 845.50719 -2.31 28.89 3267 3267 MS2 15/16 Linfeng_091311_rIgG_6.raw IPI00217468.3 Histone H1.5 14.60 1 3 4 6 15.35 14.60 4 6 226 22.6 10.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 391 3.39 0.00 1 44 25 3 407.88565 1221.64240 -4.13 20.99 2169 2169 MS2 28/44 Linfeng_091311_rIgG_7.raw High ALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 318 2.78 0.00 0 12 17 2 547.27789 1093.54851 -3.62 24.16 2604 2604 MS2 18/20 Linfeng_091311_rIgG_7.raw High KALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 378 2.65 0.00 1 33 25 2 611.32562 1221.64397 -2.84 21.05 2177 2177 MS2 18/22 Linfeng_091311_rIgG_7.raw High ALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 320 2.34 0.00 0 25 25 2 547.27820 1093.54912 -3.06 24.25 2613 2613 MS2 15/20 Linfeng_091311_rIgG_9.raw High GTGASGSFK Unambiguous 6 2 IPI00217465.5;IPI00217468.3 CID 1.0000 0.0000 1 1 108 2.10 0.00 0 32 25 2 406.19971 811.39214 -2.91 13.39 1151 1151 MS2 10/16 Linfeng_091311_rIgG_6.raw High ATGPPVSELITK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 328 2.10 0.00 0 7 25 2 606.84326 1212.67925 -3.50 30.71 3496 3496 MS2 17/22 Linfeng_091311_rIgG_7.raw IPI00217473.5 Hemoglobin subunit zeta 40.85 1 5 5 8 8.76 26.06 3 3 14.74 25.35 3 5 0.00 142 15.6 8.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 343 4.20 0.00 0 0 25 2 817.91162 1634.81597 -4.45 28.70 3354 3354 MS2 23/28 Linfeng_091311_rIgG_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 332 4.08 0.00 0 3 9 2 817.91449 1634.82170 -0.94 4.09 436 436 MS2 23/28 Linfeng_122411_rIgG_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 363 3.89 0.00 0 0 25 2 817.91632 1634.82536 1.30 27.62 2320 2320 MS2 22/28 Linfeng_122411_rIgG_10.raw High FLSVVSSVLTEK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 239 2.52 0.00 0 6 25 2 654.87305 1308.73882 -1.67 39.21 4743 4743 MS2 20/22 Linfeng_091311_rIgG_10.raw Medium ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 391 2.42 0.00 0 16 16 3 545.61188 1634.82108 -1.32 4.13 442 442 MS2 20/56 Linfeng_122411_rIgG_10.raw High LSELHAYILR Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 398 2.21 0.00 0 62 25 2 607.85059 1214.69390 3.85 26.80 2211 2211 MS2 15/18 Linfeng_122411_rIgG_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 628 2.14 0.00 0 64 25 2 538.28632 1075.56536 2.15 25.92 2096 2096 MS2 15/20 Linfeng_122411_rIgG_10.raw High VVAAVGDAVK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 292 2.05 0.00 0 9 25 2 464.77524 928.54320 -3.31 21.94 2406 2406 MS2 14/18 Linfeng_091311_rIgG_10.raw IPI00217709.1 Isoform Beta-1 of DNA topoisomerase 2-beta 29.67 5 31 38 88 63.34 13.76 18 24 122.29 20.91 26 38 65.16 9.62 12 26 1621 182.5 8.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 249 5.07 0.00 0 0 25 2 1244.12366 2487.24004 4.42 51.15 5486 5486 MS2 24/42 Linfeng_122411_rIgG_2.raw High SQDFGNLFSFPSYSQK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 191 5.01 0.00 0 8 25 2 926.43378 1851.86028 2.92 41.69 4288 4288 MS2 23/30 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 363 4.55 0.00 0 23 25 3 547.62738 1640.86759 2.00 36.83 3675 3675 MS2 32/56 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 296 4.08 0.00 0 9 25 2 820.93738 1640.86748 1.93 36.84 3676 3676 MS2 22/28 Linfeng_122411_rIgG_2.raw High VSIDPESNIISIWNNGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 357 4.02 0.00 0 12 25 2 943.48853 1885.96977 2.27 42.50 4391 4391 MS2 23/32 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 270 3.96 0.00 0 27 25 2 834.91077 1668.81426 1.58 36.85 3677 3677 MS2 21/30 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 454 3.95 0.00 0 3 13 2 731.38464 1461.76201 2.43 36.62 3646 3646 MS2 20/24 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 322 3.94 0.00 0 12 25 3 556.94330 1668.81534 2.23 36.89 3682 3682 MS2 29/60 Linfeng_122411_rIgG_2.raw High IKHFDGEDYTcITFQPDLSK Unambiguous 5 1 IPI00217709.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 192 3.88 0.00 1 9 25 4 604.28961 2414.13662 1.34 32.62 3143 3143 MS2 37/114 Linfeng_122411_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 326 3.86 0.00 0 5 25 3 829.75201 2487.24149 5.00 51.03 5471 5471 MS2 32/84 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 457 3.85 0.00 0 2 88 2 731.38818 1461.76909 7.27 45.47 6815 6815 MS2 20/24 Linfeng_20120125_PCAF_1.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 400 3.68 0.00 0 23 25 2 731.38110 1461.75493 -2.42 37.61 4474 4474 MS2 20/24 Linfeng_091311_rIgG_2.raw High SQDFGNLFSFPSYSQK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 216 3.55 0.00 0 7 25 3 617.95819 1851.86002 2.79 41.70 4289 4289 MS2 31/60 Linfeng_122411_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.48 0.00 0 5 25 2 880.95746 1760.90764 4.30 49.23 5246 5246 MS2 20/30 Linfeng_122411_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 260 3.42 0.00 0 20 25 2 564.84125 1128.67522 1.43 33.43 3245 3245 MS2 19/22 Linfeng_122411_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 422 3.38 0.00 0 41 25 3 587.64032 1760.90641 3.60 49.19 5242 5242 MS2 30/60 Linfeng_122411_rIgG_2.raw High LAQAEAAGLHK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 388 3.34 0.00 0 23 25 3 370.20743 1108.60773 -2.94 18.23 1834 1834 MS2 25/40 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 502 3.29 0.00 0 2 9 3 487.92520 1461.76105 1.77 36.62 3647 3647 MS2 33/48 Linfeng_122411_rIgG_2.raw High KYETVQDILK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 325 3.29 0.00 1 14 25 3 412.89960 1236.68424 0.62 28.63 2621 2621 MS2 20/36 Linfeng_122411_rIgG_2.raw High VSIDPESNIISIWNNGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 432 3.28 0.00 0 5 25 3 629.32813 1885.96982 2.29 42.48 4389 4389 MS2 31/64 Linfeng_122411_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 391 3.26 0.00 0 19 25 2 679.36108 1357.71489 2.80 25.21 2162 2162 MS2 19/22 Linfeng_122411_rIgG_2.raw High LDKDIVALMTR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 359 3.24 0.00 1 4 25 3 425.57623 1274.71415 0.30 33.97 3313 3313 MS2 22/40 Linfeng_122411_rIgG_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 355 3.20 0.00 0 2 25 2 765.40430 1529.80132 1.33 33.56 3261 3261 MS2 21/24 Linfeng_122411_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 308 3.13 0.00 0 18 25 3 829.74786 2487.22904 -0.01 52.22 6330 6330 MS2 29/84 Linfeng_091311_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.12 0.00 0 10 25 3 587.63788 1760.89908 -0.56 50.44 6031 6031 MS2 25/60 Linfeng_091311_rIgG_3.raw High NTVEITELPVR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 378 3.07 0.00 0 9 25 2 635.85529 1270.70329 2.43 30.70 2893 2893 MS2 16/20 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 3.06 0.00 0 5 25 3 487.92535 1461.76151 2.08 36.58 3616 3616 MS2 29/48 Linfeng_122411_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 435 3.05 0.00 0 1 16 3 487.92239 1461.75263 -3.99 37.66 4481 4481 MS2 31/48 Linfeng_091311_rIgG_2.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 316 3.01 0.00 0 10 25 3 453.26355 1357.77610 2.54 41.39 4250 4250 MS2 26/44 Linfeng_122411_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 406 2.95 0.00 0 10 25 3 587.63690 1760.89615 -2.22 50.39 6101 6101 MS2 29/60 Linfeng_091311_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 299 2.94 0.00 0 29 16 2 718.85217 1436.69707 -3.20 35.48 4198 4198 MS2 19/22 Linfeng_091311_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 354 2.94 0.00 0 39 25 2 564.83838 1128.66948 -3.65 34.80 4108 4108 MS2 19/22 Linfeng_091311_rIgG_2.raw High TPALISDYKEYHTDTTVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 369 2.91 0.00 1 45 100 3 694.68848 2082.05088 5.69 36.11 4580 4580 MS2 20/68 Linfeng_20120125_PCAF_1.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 313 2.91 0.00 0 32 25 3 829.74884 2487.23197 1.17 52.43 6251 6251 MS2 29/84 Linfeng_091311_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 2.85 0.00 0 34 100 2 731.38855 1461.76982 7.77 45.16 6741 6741 MS2 19/24 Linfeng_20120125_PCAF_1.raw High HFDGEDYTcITFQPDLSK Unambiguous 5 1 IPI00217709.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 73 2.84 0.00 0 19 25 3 724.99091 2172.95816 1.76 34.60 3392 3392 MS2 22/68 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 306 2.84 0.00 0 25 100 2 834.91510 1668.82292 6.77 45.44 5696 5696 MS2 17/30 Linfeng_20120125_PCAF_2.raw High VIHELANER Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 374 2.76 0.00 0 15 21 3 360.86362 1080.57630 -3.13 18.41 1860 1860 MS2 20/32 Linfeng_091311_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 414 2.74 0.00 0 62 25 3 587.63922 1760.90311 1.73 49.14 5234 5234 MS2 22/60 Linfeng_122411_rIgG_3.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 436 2.74 0.00 0 27 100 2 679.36401 1357.72075 7.11 32.05 2992 2992 MS2 17/22 Linfeng_20120125_PCAF_2.raw High EWLVGMLGAESTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 350 2.73 0.00 0 31 25 2 710.86292 1420.71855 3.09 40.05 4081 4081 MS2 19/24 Linfeng_122411_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 462 2.72 0.00 0 46 25 3 453.24280 1357.71384 2.02 27.32 2445 2445 MS2 20/44 Linfeng_122411_rIgG_2.raw Medium LDDANDAGGKHSLEcTLILTEGDSAK Unambiguous 5 1 IPI00217709.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.72 0.00 1 15 25 4 683.32880 2730.29336 1.66 30.99 2932 2932 MS2 30/150 Linfeng_122411_rIgG_2.raw Medium RLHGLPEQFLYGTATK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 375 2.72 0.00 1 23 25 4 458.50034 1830.97951 -3.63 31.76 3708 3708 MS2 26/90 Linfeng_091311_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 528 2.69 0.00 0 25 100 2 679.36377 1357.72026 6.75 31.86 3545 3545 MS2 20/22 Linfeng_20120125_PCAF_1.raw High HSLEcTLILTEGDSAK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 320 2.67 0.00 0 23 25 3 591.96100 1773.86844 -0.21 29.94 2795 2795 MS2 28/60 Linfeng_122411_rIgG_2.raw Medium VYVPALIFGQLLTSSNYDDDEKK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 289 2.66 0.00 1 9 25 4 654.58881 2615.33339 3.58 47.78 5065 5065 MS2 37/132 Linfeng_122411_rIgG_2.raw High EDLAAFVEELDKVESQER Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 316 2.66 0.00 1 39 25 3 703.01318 2107.02500 2.81 44.55 4652 4652 MS2 18/68 Linfeng_122411_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 37 25 2 718.85248 1436.69768 -2.77 35.58 4165 4165 MS2 16/22 Linfeng_091311_rIgG_3.raw High KEWLTNFMEDR Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 201 2.64 0.00 1 8 100 3 490.23654 1468.69507 4.13 48.35 7512 7512 MS2 20/40 Linfeng_20120125_PCAF_1.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 483 2.63 0.00 0 17 100 2 679.36353 1357.71977 6.40 32.07 3596 3596 MS2 18/22 Linfeng_20120125_PCAF_1.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 492 2.63 0.00 0 20 100 2 731.38763 1461.76799 6.52 45.55 5723 5723 MS2 20/24 Linfeng_20120125_PCAF_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 348 2.56 0.00 0 34 100 2 718.86035 1436.71343 8.19 42.46 5143 5143 MS2 15/22 Linfeng_20120125_PCAF_3.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 353 2.56 0.00 0 59 100 2 718.85901 1436.71074 6.32 42.91 5098 5098 MS2 15/22 Linfeng_20120125_PCAF_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 313 2.55 0.00 0 18 100 2 564.84412 1128.68096 6.52 41.92 5956 5956 MS2 19/22 Linfeng_20120125_PCAF_1.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 349 2.52 0.00 0 44 100 2 718.85956 1436.71184 7.08 41.78 5922 5922 MS2 16/22 Linfeng_20120125_PCAF_1.raw High DKLDETGVALK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 553 2.52 0.00 1 16 25 2 594.82458 1188.64189 -4.39 24.25 2680 2680 MS2 15/20 Linfeng_091311_rIgG_2.raw Medium TPALISDYKEYHTDTTVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 359 2.52 0.00 1 9 25 4 521.26337 2082.03164 -3.55 28.14 3219 3219 MS2 27/102 Linfeng_091311_rIgG_2.raw High IMIMTDQDQDGSHIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 186 2.46 0.00 0 48 100 2 866.41095 1731.81462 6.06 27.43 2490 2490 MS2 14/28 Linfeng_20120125_PCAF_1.raw High IMIMTDQDQDGSHIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 208 2.45 0.00 0 43 100 2 866.41235 1731.81743 7.69 27.27 2454 2454 MS2 12/28 Linfeng_20120125_PCAF_1.raw Medium EDLAAFVEELDKVESQER Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 275 2.45 0.00 1 53 25 3 703.00903 2107.01255 -3.10 45.34 5394 5394 MS2 28/68 Linfeng_091311_rIgG_3.raw High YIFTMLSTLAR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 521 2.44 0.00 0 16 25 2 658.35950 1315.71172 2.89 43.31 4494 4494 MS2 16/20 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 486 2.42 0.00 0 12 100 2 731.38867 1461.77007 7.94 45.79 5953 5953 MS2 18/24 Linfeng_20120125_PCAF_3.raw High SYDDAESLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 61 2.40 0.00 0 22 25 2 514.23114 1027.45500 -2.80 21.52 2295 2295 MS2 14/16 Linfeng_091311_rIgG_2.raw High HLTYNDFINK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 292 2.40 0.00 0 6 25 2 632.82129 1264.63530 2.54 27.47 2465 2465 MS2 13/18 Linfeng_122411_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 454 2.37 0.00 0 29 100 2 679.36395 1357.72063 7.02 32.15 3009 3009 MS2 16/22 Linfeng_20120125_PCAF_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 437 2.33 0.00 0 11 100 2 765.40790 1529.80852 6.04 41.58 5875 5875 MS2 14/24 Linfeng_20120125_PCAF_1.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 316 2.32 0.00 0 8 25 2 491.75616 982.50505 2.43 28.42 2594 2594 MS2 13/14 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 293 2.31 0.00 0 37 100 2 834.91388 1668.82048 5.31 45.16 6742 6742 MS2 19/30 Linfeng_20120125_PCAF_1.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 372 2.30 0.00 0 43 25 2 564.83862 1128.66997 -3.22 34.81 4063 4063 MS2 19/22 Linfeng_091311_rIgG_3.raw Medium VEFDEEFSGAPVEGAGEEALTPSVPINK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 221 2.27 0.00 0 7 25 3 973.47260 2918.40323 3.04 38.74 3916 3916 MS2 21/108 Linfeng_122411_rIgG_2.raw High NTVEITELPVR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 369 2.27 0.00 0 36 25 2 635.85077 1270.69426 -4.67 32.23 3770 3770 MS2 17/20 Linfeng_091311_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 273 2.25 0.00 0 52 100 2 564.84418 1128.68108 6.62 42.44 6080 6080 MS2 18/22 Linfeng_20120125_PCAF_1.raw High NTVEITELPVR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 352 2.23 0.00 0 43 100 2 635.85736 1270.70745 5.70 36.72 4726 4726 MS2 16/20 Linfeng_20120125_PCAF_1.raw High DKLDETGVALK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 572 2.22 0.00 1 42 25 2 594.82520 1188.64311 -3.36 24.31 2655 2655 MS2 15/20 Linfeng_091311_rIgG_3.raw High KEWLTNFMEDR Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 221 2.22 0.00 1 7 100 2 734.85181 1468.69634 4.99 48.34 7509 7509 MS2 15/20 Linfeng_20120125_PCAF_1.raw High KGDLDTAAVK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 587 2.21 0.00 1 41 25 2 509.28110 1017.55492 -2.60 16.68 1616 1616 MS2 15/18 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.15 0.00 0 5 25 2 491.75320 982.49913 -3.60 30.35 3521 3521 MS2 13/14 Linfeng_091311_rIgG_2.raw High SYVDLYVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 438 2.13 0.00 0 18 25 2 493.76407 986.52086 1.54 29.63 2753 2753 MS2 13/14 Linfeng_122411_rIgG_2.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 288 2.11 0.00 0 4 16 2 679.39178 1357.77629 2.68 41.35 4244 4244 MS2 20/22 Linfeng_122411_rIgG_2.raw High SPSDLWK Unambiguous 11 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 404 2.07 0.00 0 9 25 2 416.71194 832.41661 -4.05 28.00 3200 3200 MS2 10/12 Linfeng_091311_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 341 2.06 0.00 0 30 100 2 718.86047 1436.71367 8.36 42.32 5108 5108 MS2 14/22 Linfeng_20120125_PCAF_3.raw High KYETVQDILK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 306 2.04 0.00 1 15 100 2 618.84918 1236.69109 6.16 36.50 4675 4675 MS2 13/18 Linfeng_20120125_PCAF_1.raw High SYVDLYVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 261 2.03 0.00 0 16 25 2 493.76163 986.51598 -3.41 31.25 3640 3640 MS2 12/14 Linfeng_091311_rIgG_2.raw High LQLEETMPSPYGR Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 348 2.03 0.00 0 8 100 2 760.88013 1520.75298 7.60 37.34 4019 4019 MS2 11/24 Linfeng_20120125_PCAF_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 306 2.03 0.00 0 44 25 2 491.75452 982.50176 -0.92 28.48 2570 2570 MS2 13/14 Linfeng_122411_rIgG_3.raw High LQLEETMPSPYGR Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 380 2.02 0.00 0 16 100 2 760.88007 1520.75286 7.52 37.11 4821 4821 MS2 15/24 Linfeng_20120125_PCAF_1.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 396 2.01 0.00 0 18 25 2 679.38757 1357.76787 -3.52 42.44 5096 5096 MS2 20/22 Linfeng_091311_rIgG_2.raw IPI00217862.5 U3 small nucleolar RNA-interacting protein 2 12.21 1 3 3 3 10.69 12.21 3 3 475 51.8 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VWNVAENSYVETLFGHQDAVAALDALSR Unambiguous 1 1 IPI00217862.5 CID 1.0000 0.0000 1 1 271 4.34 0.00 0 17 25 3 1025.84277 3075.51377 -1.11 48.80 5790 5790 MS2 31/108 Linfeng_091311_rIgG_5.raw High QLDLLcDIPLVGFINSLK Unambiguous 1 1 IPI00217862.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.80 0.00 0 15 25 3 686.71771 2058.13858 3.94 54.92 6512 6512 MS2 35/68 Linfeng_091311_rIgG_5.raw High GTHQLYSTSHDR Unambiguous 1 1 IPI00217862.5 CID 1.0000 0.0000 1 1 151 2.55 0.00 0 45 25 3 467.88834 1401.65046 -0.10 14.85 1291 1291 MS2 20/44 Linfeng_091311_rIgG_5.raw IPI00217963.3 "Keratin, type I cytoskeletal 16" 55.39 12 13 24 226 190.77 36.15 15 71 103.72 25.58 12 36 341.25 43.55 17 119 473 51.2 5.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 153 5.64 0.00 0 19 98 3 688.72455 2064.15909 6.88 47.89 6262 6262 MS2 38/72 Linfeng_20120125_PCAF_2.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 188 5.57 0.00 0 5 12 3 688.72058 2064.14719 1.12 37.72 3706 3706 MS2 40/72 Linfeng_122411_rIgG_8.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 199 5.55 0.00 0 7 24 3 688.71698 2064.13639 -4.12 38.62 4514 4514 MS2 44/72 Linfeng_091311_rIgG_9.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 216 4.99 0.00 0 6 25 3 784.03760 2350.09824 3.23 24.12 1955 1955 MS2 31/84 Linfeng_122411_rIgG_8.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 189 4.95 0.00 0 3 25 3 784.03375 2350.08670 -1.68 25.20 2745 2745 MS2 37/84 Linfeng_091311_rIgG_9.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 206 4.92 0.00 0 26 12 3 688.71918 2064.14298 -0.92 37.50 4066 4066 MS2 38/72 Linfeng_122411_rIgG_5.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 396 4.82 0.00 1 1 100 3 707.35870 2120.06156 7.02 28.17 2327 2327 MS2 35/72 Linfeng_20120125_PCAF_2.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 332 4.76 0.00 1 0 100 2 1060.53430 2120.06133 6.91 27.74 2090 2090 MS2 21/36 Linfeng_20120125_PCAF_3.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 178 4.73 0.00 0 4 25 3 688.72113 2064.14884 1.92 37.31 3333 3333 MS2 41/72 Linfeng_122411_rIgG_7.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 124 4.66 0.00 0 8 100 2 1032.58423 2064.16118 7.90 47.69 6406 6406 MS2 24/36 Linfeng_20120125_PCAF_3.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 339 4.66 0.00 1 0 100 2 1060.53467 2120.06206 7.26 27.58 2062 2062 MS2 25/36 Linfeng_20120125_PCAF_3.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 153 4.58 0.00 0 31 59 3 688.72449 2064.15891 6.80 48.08 6308 6308 MS2 37/72 Linfeng_20120125_PCAF_2.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 183 4.55 0.00 0 13 100 2 1044.49451 2087.98174 7.37 35.60 3781 3781 MS2 24/40 Linfeng_20120125_PCAF_9.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 196 4.53 0.00 0 11 100 2 1044.49475 2087.98223 7.60 35.75 3817 3817 MS2 23/40 Linfeng_20120125_PCAF_9.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 345 4.49 0.00 1 0 100 2 1060.53491 2120.06255 7.49 27.34 2177 2177 MS2 23/36 Linfeng_20120125_PCAF_2.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 324 4.47 0.00 1 15 25 3 707.35016 2120.03592 -5.07 26.78 2722 2722 MS2 33/72 Linfeng_091311_rIgG_1.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 250 4.37 0.00 0 3 100 3 784.04108 2350.10868 7.67 24.24 1752 1752 MS2 35/84 Linfeng_20120125_PCAF_2.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 203 4.36 0.00 0 14 25 3 688.71686 2064.13602 -4.29 38.48 4588 4588 MS2 41/72 Linfeng_091311_rIgG_2.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 192 4.33 0.00 0 7 100 2 1044.49402 2087.98076 6.90 35.50 4011 4011 MS2 23/40 Linfeng_20120125_PCAF_6.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 189 4.30 0.00 0 0 100 2 1044.49365 2087.98003 6.55 35.35 4545 4545 MS2 25/40 Linfeng_20120125_PCAF_5.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 240 4.28 0.00 0 6 100 3 784.03992 2350.10520 6.19 23.27 1802 1802 MS2 32/84 Linfeng_20120125_PCAF_5.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 195 4.18 0.00 0 0 100 2 1044.49463 2087.98198 7.49 35.54 4019 4019 MS2 23/40 Linfeng_20120125_PCAF_6.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 124 4.07 0.00 0 5 100 2 1032.58362 2064.15996 7.30 47.49 6167 6167 MS2 22/36 Linfeng_20120125_PCAF_2.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 177 4.06 0.00 0 5 100 2 1044.49463 2087.98198 7.49 35.59 3873 3873 MS2 23/40 Linfeng_20120125_PCAF_4.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 185 4.05 0.00 0 0 25 3 784.03345 2350.08579 -2.07 25.17 2712 2712 MS2 31/84 Linfeng_091311_rIgG_5.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 183 4.04 0.00 0 3 100 2 1044.49390 2087.98052 6.78 35.38 3641 3641 MS2 24/40 Linfeng_20120125_PCAF_2.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 383 4.01 0.00 1 19 100 3 707.35791 2120.05918 5.90 27.37 2477 2477 MS2 30/72 Linfeng_20120125_PCAF_1.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 240 3.99 0.00 0 8 100 3 784.04016 2350.10593 6.50 23.22 1652 1652 MS2 30/84 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 234 3.94 0.00 0 14 100 3 784.03973 2350.10465 5.96 25.24 1868 1868 MS2 29/84 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 237 3.89 0.00 0 16 100 3 784.04053 2350.10703 6.97 23.52 1535 1535 MS2 34/84 Linfeng_20120125_PCAF_3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 179 3.89 0.00 0 6 100 2 1044.49377 2087.98027 6.67 35.72 4061 4061 MS2 22/40 Linfeng_20120125_PCAF_6.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 398 3.86 0.00 1 0 100 3 707.35864 2120.06137 6.94 27.50 2384 2384 MS2 27/72 Linfeng_20120125_PCAF_6.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 239 3.75 0.00 0 26 100 3 784.04016 2350.10593 6.50 23.92 1742 1742 MS2 32/84 Linfeng_20120125_PCAF_1.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 397 3.72 0.00 1 9 100 3 707.35992 2120.06522 8.75 27.76 2200 2200 MS2 28/72 Linfeng_20120125_PCAF_9.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 396 3.71 0.00 1 21 100 3 707.35883 2120.06192 7.19 27.45 2595 2595 MS2 28/72 Linfeng_20120125_PCAF_8.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 388 3.68 0.00 1 5 100 3 707.35663 2120.05533 4.09 27.03 2491 2491 MS2 28/72 Linfeng_20120125_PCAF_5.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 154 3.67 0.00 0 34 100 3 688.72467 2064.15946 7.06 47.62 6197 6197 MS2 33/72 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 253 3.64 0.00 0 18 100 3 784.04144 2350.10978 8.14 24.63 1652 1652 MS2 30/84 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 248 3.63 0.00 0 50 100 3 784.04065 2350.10739 7.12 23.66 1703 1703 MS2 30/84 Linfeng_20120125_PCAF_1.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 400 3.62 0.00 1 100 3 707.35852 2120.06101 6.76 27.15 2139 2139 MS2 27/72 Linfeng_20120125_PCAF_2.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 295 3.60 0.00 0 0 25 2 703.34766 1405.68804 -2.69 21.60 2241 2241 MS2 20/24 Linfeng_091311_rIgG_9.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 386 3.60 0.00 1 28 100 3 707.35889 2120.06211 7.28 27.41 2584 2584 MS2 24/72 Linfeng_20120125_PCAF_8.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 173 3.59 0.00 0 12 100 2 1044.49414 2087.98100 7.02 36.27 3804 3804 MS2 19/40 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 240 3.56 0.00 0 10 100 3 784.04028 2350.10630 6.66 23.81 1797 1797 MS2 28/84 Linfeng_20120125_PCAF_6.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 207 3.42 0.00 0 0 100 2 1175.55676 2350.10625 6.64 23.79 1706 1706 MS2 19/42 Linfeng_20120125_PCAF_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 273 3.35 0.00 0 9 25 2 703.34796 1405.68865 -2.26 21.45 2286 2286 MS2 21/24 Linfeng_091311_rIgG_2.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 287 3.33 0.00 0 20 25 2 703.34851 1405.68974 -1.48 21.49 2262 2262 MS2 19/24 Linfeng_091311_rIgG_3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 179 3.30 0.00 0 0 100 2 1044.49451 2087.98174 7.37 35.45 3582 3582 MS2 20/40 Linfeng_20120125_PCAF_3.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 384 3.30 0.00 1 17 100 3 707.35785 2120.05899 5.81 27.72 2657 2657 MS2 25/72 Linfeng_20120125_PCAF_5.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 389 3.18 0.00 1 26 100 3 707.35754 2120.05808 5.38 27.66 2220 2220 MS2 28/72 Linfeng_20120125_PCAF_4.raw High ILNEMRDQYEQMAEK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 233 3.18 0.00 1 60 100 2 949.44885 1897.89043 6.36 39.68 4463 4463 MS2 19/28 Linfeng_20120125_PCAF_2.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 249 3.16 0.00 0 50 25 2 703.34802 1405.68877 -2.17 19.82 1774 1774 MS2 20/24 Linfeng_091311_rIgG_1.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 268 3.15 0.00 0 7 25 2 703.34808 1405.68889 -2.09 21.66 2241 2241 MS2 19/24 Linfeng_091311_rIgG_5.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.13 0.00 0 30 25 2 553.78412 1106.56096 -1.23 4.81 544 544 MS2 19/20 Linfeng_122411_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 400 3.08 0.00 1 63 100 3 707.35852 2120.06101 6.76 27.41 2036 2036 MS2 24/72 Linfeng_20120125_PCAF_3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 180 3.07 0.00 0 6 100 2 1044.49475 2087.98223 7.60 35.63 3881 3881 MS2 21/40 Linfeng_20120125_PCAF_4.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 218 3.03 0.00 0 11 25 3 784.03778 2350.09879 3.46 24.03 1812 1812 MS2 25/84 Linfeng_122411_rIgG_9.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 290 3.03 0.00 0 24 25 2 669.83429 1338.66130 -2.67 24.84 2765 2765 MS2 20/26 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 3.02 0.00 0 3 6 2 651.33167 1301.65605 -1.81 4.19 457 457 MS2 19/22 Linfeng_122411_rIgG_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 3.02 0.00 0 6 25 2 639.79468 1278.58208 -2.76 21.33 2269 2269 MS2 21/28 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 2.98 0.00 0 13 4 2 651.33118 1301.65508 -2.56 4.10 471 471 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 340 2.94 0.00 0 18 25 2 651.33527 1301.66326 3.72 25.75 1843 1843 MS2 18/22 Linfeng_122411_rIgG_1.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 297 2.92 0.00 0 12 25 2 610.80334 1220.59941 -0.92 3.40 311 311 MS2 17/20 Linfeng_122411_rIgG_9.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.90 0.00 0 36 25 2 639.79510 1278.58293 -2.09 21.41 2244 2244 MS2 21/28 Linfeng_091311_rIgG_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 2.90 0.00 0 33 25 2 639.79437 1278.58147 -3.24 21.52 2221 2221 MS2 21/28 Linfeng_091311_rIgG_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High KNHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 366 2.86 0.00 1 33 100 3 457.23770 1369.69855 6.73 27.82 2260 2260 MS2 19/40 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 346 2.85 0.00 0 4 25 2 651.33386 1301.66045 1.56 25.38 2359 2359 MS2 19/22 Linfeng_122411_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.83 0.00 1 4 100 2 690.37207 1379.73686 6.57 36.42 3797 3797 MS2 15/20 Linfeng_20120125_PCAF_3.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 279 2.80 0.00 0 13 100 2 669.84009 1338.67290 6.00 24.08 1737 1737 MS2 19/26 Linfeng_20120125_PCAF_2.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 146 2.79 0.00 0 0 100 2 1032.57996 2064.15264 3.76 47.15 7659 7659 MS2 20/36 Linfeng_20120125_PCAF_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 6 25 2 651.33063 1301.65398 -3.41 27.08 2999 2999 MS2 19/22 Linfeng_091311_rIgG_7.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 263 2.78 0.00 0 18 25 2 669.83447 1338.66167 -2.39 24.95 2711 2711 MS2 20/26 Linfeng_091311_rIgG_9.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 376 2.77 0.00 1 16 100 3 707.36035 2120.06650 9.35 27.58 2167 2167 MS2 23/72 Linfeng_20120125_PCAF_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 20 25 2 651.33459 1301.66191 2.69 20.48 1702 1702 MS2 17/22 Linfeng_122411_rIgG_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 20 25 2 651.33075 1301.65422 -3.22 27.05 3018 3018 MS2 19/22 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.75 0.00 1 1 100 2 690.37219 1379.73711 6.75 36.06 3719 3719 MS2 16/20 Linfeng_20120125_PCAF_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 324 2.75 0.00 1 28 100 2 593.35492 1185.70256 6.33 41.42 4792 4792 MS2 14/18 Linfeng_20120125_PCAF_2.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 175 2.74 0.00 0 9 100 2 1044.49414 2087.98100 7.02 35.41 4411 4411 MS2 20/40 Linfeng_20120125_PCAF_1.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 398 2.73 0.00 1 15 100 3 707.35992 2120.06522 8.75 27.63 2177 2177 MS2 21/72 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 244 2.73 0.00 0 12 100 3 784.04095 2350.10831 7.51 23.63 1736 1736 MS2 24/84 Linfeng_20120125_PCAF_8.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 651.33057 1301.65386 -3.50 26.83 2996 2996 MS2 19/22 Linfeng_091311_rIgG_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 321 2.68 0.00 0 21 25 2 669.83508 1338.66289 -1.48 25.13 2761 2761 MS2 18/26 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 17 25 2 639.79437 1278.58147 -3.24 21.53 2231 2231 MS2 22/28 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 390 2.66 0.00 0 12 100 2 651.33771 1301.66814 7.47 27.14 2096 2096 MS2 18/22 Linfeng_20120125_PCAF_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 404 2.64 0.00 1 27 100 3 460.58389 1379.73713 6.76 35.73 4487 4487 MS2 23/40 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 344 2.64 0.00 0 31 25 2 651.33484 1301.66240 3.07 25.70 1945 1945 MS2 18/22 Linfeng_122411_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 338 2.63 0.00 0 25 100 2 651.33704 1301.66680 6.44 24.70 1661 1661 MS2 17/22 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 488 2.61 0.00 0 5 100 2 515.30438 1029.60149 7.33 37.04 3939 3939 MS2 15/16 Linfeng_20120125_PCAF_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.60 0.00 0 5 25 2 651.33014 1301.65300 -4.16 27.05 2997 2997 MS2 19/22 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.59 0.00 0 11 25 2 610.80072 1220.59416 -5.22 25.93 2871 2871 MS2 15/20 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 394 2.57 0.00 0 22 25 2 651.33234 1301.65740 -0.78 25.57 2427 2427 MS2 18/22 Linfeng_122411_rIgG_5.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 2.57 0.00 0 9 25 2 639.79535 1278.58342 -1.71 21.35 2244 2244 MS2 21/28 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 2.57 0.00 0 19 25 2 639.79492 1278.58257 -2.38 21.63 2282 2282 MS2 20/28 Linfeng_091311_rIgG_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 378 2.56 0.00 0 26 25 2 651.33429 1301.66130 2.22 25.71 2229 2229 MS2 18/22 Linfeng_122411_rIgG_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 303 2.55 0.00 0 3 25 2 651.33014 1301.65300 -4.16 26.78 3033 3033 MS2 19/22 Linfeng_091311_rIgG_2.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 266 2.55 0.00 0 19 25 2 669.83459 1338.66191 -2.21 24.99 2687 2687 MS2 19/26 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 2.54 0.00 0 10 12 2 651.33173 1301.65618 -1.72 4.31 474 474 MS2 19/22 Linfeng_122411_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw Medium QRPSEIKDYSPYFK Unambiguous 3 1 IPI00217963.3 CID 1.0000 0.0000 1 1 420 2.52 0.00 1 6 100 4 440.23010 1757.89858 7.29 34.88 3539 3539 MS2 34/78 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 364 2.52 0.00 0 23 25 2 651.33282 1301.65837 -0.03 25.78 2164 2164 MS2 17/22 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.50 0.00 1 13 100 2 690.37152 1379.73577 5.77 36.52 3851 3851 MS2 15/20 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 293 2.50 0.00 0 25 25 2 651.33051 1301.65373 -3.59 26.95 2953 2953 MS2 19/22 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 409 2.49 0.00 0 26 100 2 651.33752 1301.66777 7.19 24.53 1646 1646 MS2 15/22 Linfeng_20120125_PCAF_9.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 334 2.48 0.00 1 24 100 2 593.35553 1185.70378 7.36 41.29 4766 4766 MS2 13/18 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.46 0.00 1 0 100 2 690.37231 1379.73735 6.92 35.59 3613 3613 MS2 15/20 Linfeng_20120125_PCAF_3.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.45 0.00 0 19 25 2 610.80090 1220.59453 -4.92 25.92 2878 2878 MS2 15/20 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 379 2.43 0.00 1 12 100 2 690.37231 1379.73735 6.92 35.43 3651 3651 MS2 14/20 Linfeng_20120125_PCAF_2.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 130 2.43 0.00 0 22 100 2 1032.58301 2064.15874 6.71 47.60 7323 7323 MS2 16/36 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 308 2.42 0.00 0 15 25 2 651.33057 1301.65386 -3.50 26.92 3105 3105 MS2 19/22 Linfeng_091311_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 303 2.42 0.00 0 23 25 2 651.33026 1301.65325 -3.97 26.68 2984 2984 MS2 19/22 Linfeng_091311_rIgG_3.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 288 2.42 0.00 0 19 100 2 669.84088 1338.67449 7.18 24.34 1616 1616 MS2 18/26 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 309 2.41 0.00 0 5 25 2 610.80035 1220.59343 -5.82 26.19 2904 2904 MS2 17/20 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 372 2.41 0.00 1 12 100 2 690.37140 1379.73552 5.60 36.68 3885 3885 MS2 13/20 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.39 0.00 1 25 100 2 690.37201 1379.73674 6.48 35.31 4387 4387 MS2 15/20 Linfeng_20120125_PCAF_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 411 2.39 0.00 0 21 100 2 651.33777 1301.66826 7.57 25.16 1857 1857 MS2 17/22 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.37 0.00 1 63 100 3 460.58411 1379.73777 7.22 36.22 3795 3795 MS2 19/40 Linfeng_20120125_PCAF_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 291 2.37 0.00 0 58 25 2 610.80304 1220.59880 -1.42 25.77 2584 2584 MS2 16/20 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 355 2.36 0.00 1 9 100 2 690.37183 1379.73638 6.21 35.61 4035 4035 MS2 13/20 Linfeng_20120125_PCAF_6.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 224 2.36 0.00 0 13 25 2 548.76978 1096.53227 1.16 36.55 3238 3238 MS2 14/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 70 25 2 651.32861 1301.64995 -6.50 27.21 3055 3055 MS2 15/22 Linfeng_091311_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 371 2.31 0.00 1 4 100 2 690.37256 1379.73784 7.28 36.41 3960 3960 MS2 14/20 Linfeng_20120125_PCAF_9.raw High EVFTSSSSSSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 107 2.30 0.00 0 48 25 2 630.78699 1260.56670 -2.85 18.47 1796 1796 MS2 15/22 Linfeng_091311_rIgG_9.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.29 0.00 0 24 25 2 639.79449 1278.58171 -3.04 21.68 2260 2260 MS2 20/28 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 345 2.29 0.00 0 20 100 2 651.33673 1301.66619 5.97 27.64 2639 2639 MS2 16/22 Linfeng_20120125_PCAF_5.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 43 100 3 460.58365 1379.73639 6.23 35.93 4536 4536 MS2 16/40 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High QRPSEIKDYSPYFK Unambiguous 3 1 IPI00217963.3 CID 1.0000 0.0000 1 1 338 2.25 0.00 1 58 100 2 879.44928 1757.89128 3.14 34.97 3558 3558 MS2 10/26 Linfeng_20120125_PCAF_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.25 0.00 0 13 25 2 610.80060 1220.59392 -5.42 25.83 2902 2902 MS2 17/20 Linfeng_091311_rIgG_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 282 2.25 0.00 0 35 25 2 610.80206 1220.59685 -3.02 26.01 2854 2854 MS2 16/20 Linfeng_091311_rIgG_9.raw High NHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 242 2.25 0.00 0 13 100 2 621.30548 1241.60369 7.51 28.82 2440 2440 MS2 13/18 Linfeng_20120125_PCAF_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.24 0.00 1 26 100 2 690.37262 1379.73796 7.36 35.53 4016 4016 MS2 13/20 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.24 0.00 0 27 25 2 639.79425 1278.58122 -3.43 21.61 2318 2318 MS2 21/28 Linfeng_091311_rIgG_8.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.24 0.00 0 41 25 2 610.80115 1220.59502 -4.52 26.18 2875 2875 MS2 16/20 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.23 0.00 1 15 100 2 532.81219 1064.61711 6.76 23.08 1526 1526 MS2 14/16 Linfeng_20120125_PCAF_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 380 2.22 0.00 1 2 100 2 690.37244 1379.73760 7.10 35.64 3625 3625 MS2 15/20 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 509 2.22 0.00 0 3 66 2 515.30414 1029.60100 6.86 37.00 3951 3951 MS2 15/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 341 2.21 0.00 0 37 100 2 651.33667 1301.66606 5.88 28.98 2467 2467 MS2 13/22 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 253 2.21 0.00 1 5 100 2 532.81219 1064.61711 6.76 24.65 1757 1757 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 339 2.20 0.00 0 15 100 2 651.33667 1301.66606 5.88 27.31 2090 2090 MS2 16/22 Linfeng_20120125_PCAF_7.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.20 0.00 0 27 25 2 553.78314 1106.55901 -3.00 23.20 2467 2467 MS2 19/20 Linfeng_091311_rIgG_9.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 290 2.20 0.00 0 39 100 2 548.77246 1096.53765 6.06 45.36 6159 6159 MS2 14/16 Linfeng_20120125_PCAF_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 362 2.19 0.00 1 20 100 2 690.37177 1379.73625 6.13 34.43 4322 4322 MS2 14/20 Linfeng_20120125_PCAF_5.raw High NHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 241 2.17 0.00 0 17 100 2 621.30402 1241.60076 5.15 27.20 2151 2151 MS2 13/18 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 343 2.17 0.00 0 21 100 2 651.33673 1301.66619 5.97 27.19 2149 2149 MS2 17/22 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 260 2.17 0.00 1 4 98 2 532.81287 1064.61846 8.03 24.50 1780 1780 MS2 14/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 333 2.16 0.00 0 18 100 2 651.33740 1301.66753 7.00 27.14 2315 2315 MS2 18/22 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 524 2.16 0.00 0 12 100 2 515.30396 1029.60063 6.50 37.02 4799 4799 MS2 15/16 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.16 0.00 1 37 100 2 690.37134 1379.73540 5.51 36.33 4632 4632 MS2 13/20 Linfeng_20120125_PCAF_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.15 0.00 0 48 25 2 639.79504 1278.58281 -2.19 19.47 1727 1727 MS2 20/28 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 255 2.15 0.00 1 3 100 2 532.81250 1064.61772 7.34 24.73 1765 1765 MS2 14/16 Linfeng_20120125_PCAF_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 398 2.14 0.00 1 25 100 2 690.37219 1379.73711 6.75 35.10 4337 4337 MS2 12/20 Linfeng_20120125_PCAF_1.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 254 2.14 0.00 0 15 100 2 548.77264 1096.53801 6.39 45.03 5768 5768 MS2 13/16 Linfeng_20120125_PCAF_3.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 341 2.14 0.00 0 41 25 2 669.83362 1338.65996 -3.67 24.81 2460 2460 MS2 17/26 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 343 2.14 0.00 0 9 100 2 651.33582 1301.66435 4.57 27.24 2542 2542 MS2 18/22 Linfeng_20120125_PCAF_5.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 344 2.13 0.00 1 33 100 2 593.35608 1185.70488 8.28 41.20 4749 4749 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.13 0.00 1 4 100 2 532.81171 1064.61614 5.85 24.51 1743 1743 MS2 14/16 Linfeng_20120125_PCAF_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 578 2.13 0.00 0 39 100 2 515.30377 1029.60027 6.14 36.20 3741 3741 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 416 2.13 0.00 0 38 100 2 651.33765 1301.66802 7.38 25.19 1711 1711 MS2 16/22 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 563 2.11 0.00 0 29 100 2 515.30328 1029.59929 5.20 37.84 4111 4111 MS2 14/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 408 2.11 0.00 0 22 100 2 651.33752 1301.66777 7.19 26.17 1993 1993 MS2 15/22 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 530 2.10 0.00 0 16 100 2 515.30396 1029.60063 6.50 36.70 4029 4029 MS2 15/16 Linfeng_20120125_PCAF_9.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 259 2.10 0.00 1 21 100 2 532.81287 1064.61846 8.03 24.23 1795 1795 MS2 14/16 Linfeng_20120125_PCAF_1.raw High QTVEADVNGLRR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 404 2.10 0.00 1 20 100 2 679.36694 1357.72661 6.10 30.18 2492 2492 MS2 12/22 Linfeng_20120125_PCAF_3.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 345 2.08 0.00 0 8 100 2 545.77240 1090.53752 5.96 21.28 1421 1421 MS2 14/16 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 382 2.08 0.00 1 5 100 2 690.37201 1379.73674 6.48 35.56 3866 3866 MS2 13/20 Linfeng_20120125_PCAF_4.raw High NHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 249 2.08 0.00 0 12 100 2 621.30420 1241.60112 5.44 27.98 2134 2134 MS2 14/18 Linfeng_20120125_PCAF_3.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.08 0.00 0 57 25 2 610.80389 1220.60051 -0.02 24.24 2203 2203 MS2 15/20 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 350 2.07 0.00 0 69 100 2 651.33643 1301.66557 5.50 26.25 2205 2205 MS2 16/22 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.06 0.00 1 23 100 2 690.37195 1379.73662 6.39 35.04 4322 4322 MS2 12/20 Linfeng_20120125_PCAF_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 349 2.06 0.00 0 42 100 2 651.33661 1301.66594 5.78 24.75 1913 1913 MS2 14/22 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.05 0.00 1 24 100 2 532.81268 1064.61809 7.68 23.42 1525 1525 MS2 14/16 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.05 0.00 1 4 32 2 532.81201 1064.61675 6.42 24.00 1820 1820 MS2 15/16 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 266 2.05 0.00 1 9 100 2 532.81177 1064.61626 5.96 23.83 1864 1864 MS2 14/16 Linfeng_20120125_PCAF_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 384 2.04 0.00 0 8 100 2 651.33759 1301.66789 7.29 26.99 2486 2486 MS2 14/22 Linfeng_20120125_PCAF_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 409 2.03 0.00 0 4 100 2 651.33752 1301.66777 7.19 27.25 2139 2139 MS2 17/22 Linfeng_20120125_PCAF_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 329 2.03 0.00 0 42 100 2 651.33679 1301.66631 6.07 24.55 1853 1853 MS2 16/22 Linfeng_20120125_PCAF_1.raw High NHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 251 2.03 0.00 0 9 100 2 621.30444 1241.60161 5.84 27.40 2187 2187 MS2 13/18 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 414 2.02 0.00 0 37 100 2 651.33752 1301.66777 7.19 24.56 1642 1642 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 322 2.01 0.00 0 26 100 2 651.33716 1301.66704 6.63 27.18 1997 1997 MS2 17/22 Linfeng_20120125_PCAF_3.raw High NHEEEMLALR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 245 2.01 0.00 0 14 100 2 621.30518 1241.60307 7.02 27.81 2258 2258 MS2 14/18 Linfeng_20120125_PCAF_2.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.01 0.00 0 0 100 2 545.77197 1090.53667 5.18 20.83 1549 1549 MS2 14/16 Linfeng_20120125_PCAF_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 409 2.01 0.00 1 45 100 2 690.37085 1379.73442 4.80 36.41 4652 4652 MS2 14/20 Linfeng_20120125_PCAF_1.raw IPI00217975.4 Lamin-B1 39.08 2 19 21 34 50.58 32.59 16 17 23.02 17.41 7 8 24.12 7.17 3 9 586 66.4 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SLEGDLEDLKDQIAQLEASLAAAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 336 6.08 0.00 1 28 25 3 843.44440 2528.31864 3.76 54.53 6469 6469 MS2 38/92 Linfeng_091311_rIgG_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 116 5.78 0.00 0 7 25 4 853.64703 3411.56630 -1.44 44.54 5291 5291 MS2 55/174 Linfeng_091311_rIgG_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 123 5.41 0.00 0 13 25 4 853.65070 3411.58095 2.86 43.45 4621 4621 MS2 51/174 Linfeng_122411_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 407 3.90 0.00 0 43 25 2 723.89209 1446.77690 -2.07 32.95 3817 3817 MS2 21/24 Linfeng_091311_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 457 3.86 0.00 0 7 25 3 482.93018 1446.77597 -2.71 32.99 3822 3822 MS2 26/48 Linfeng_091311_rIgG_4.raw High SLETENSALQLQVTER Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 382 3.36 0.00 0 6 100 2 909.47278 1817.93828 7.84 36.13 3998 3998 MS2 20/30 Linfeng_20120125_PCAF_4.raw High LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 390 3.16 0.00 1 6 100 3 551.28625 1651.84421 7.00 24.61 1728 1728 MS2 26/48 Linfeng_20120125_PCAF_4.raw High SLETENSALQLQVTEREEVR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 355 3.14 0.00 1 8 25 3 777.73328 2331.18528 2.79 30.57 2989 2989 MS2 22/76 Linfeng_122411_rIgG_4.raw High NQNSWGTGEDVK Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 90 3.02 0.00 0 11 25 2 667.80029 1334.59331 -2.91 22.36 2376 2376 MS2 16/22 Linfeng_091311_rIgG_4.raw High SLETENSALQLQVTER Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 390 2.86 0.00 0 17 100 2 909.47272 1817.93816 7.78 36.06 3981 3981 MS2 17/30 Linfeng_20120125_PCAF_4.raw High LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 387 2.82 0.00 1 15 100 3 551.28546 1651.84183 5.56 25.03 1777 1777 MS2 25/48 Linfeng_20120125_PCAF_4.raw High DAALATALGDKK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 519 2.77 0.00 1 25 25 2 587.32556 1173.64385 -3.07 25.12 2763 2763 MS2 17/22 Linfeng_091311_rIgG_4.raw High cQSLTEDLEFRK Unambiguous 2 1 IPI00217975.4 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 2.66 0.00 1 24 25 3 509.24927 1525.73325 1.09 28.42 2706 2706 MS2 26/44 Linfeng_122411_rIgG_4.raw High AEHDQLLLNYAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 384 2.62 0.00 0 21 25 3 472.24792 1414.72922 -2.35 29.28 3330 3330 MS2 26/44 Linfeng_091311_rIgG_4.raw Medium IQELEDLLAKEKDNSR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 432 2.57 0.00 2 10 25 4 476.00519 1900.99892 0.73 31.33 3090 3090 MS2 26/90 Linfeng_122411_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 385 2.49 0.00 0 33 100 2 723.89935 1446.79143 7.97 38.51 4541 4541 MS2 17/24 Linfeng_20120125_PCAF_4.raw High LSSEMNTSTVNSAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 143 2.48 0.00 0 8 25 2 748.85114 1496.69499 -4.02 21.97 2322 2322 MS2 16/26 Linfeng_091311_rIgG_4.raw Medium IQELEDLLAKEK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 394 2.47 0.00 1 10 25 3 476.93732 1428.79740 2.02 33.05 3311 3311 MS2 24/44 Linfeng_122411_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 351 2.45 0.00 0 32 25 2 626.31610 1251.62493 2.65 27.91 2638 2638 MS2 17/20 Linfeng_122411_rIgG_4.raw Medium KLLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 447 2.45 0.00 1 74 25 3 368.19531 1102.57138 -2.32 17.84 1742 1742 MS2 22/32 Linfeng_091311_rIgG_4.raw High IQELEDLLAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 455 2.44 0.00 0 15 25 2 586.33008 1171.65288 -3.47 37.01 4340 4340 MS2 16/18 Linfeng_091311_rIgG_4.raw Medium LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 386 2.42 0.00 1 6 100 3 551.28528 1651.84128 5.22 24.80 1748 1748 MS2 18/48 Linfeng_20120125_PCAF_4.raw Medium LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 410 2.38 0.00 1 27 100 3 551.28564 1651.84238 5.89 23.46 1614 1614 MS2 20/48 Linfeng_20120125_PCAF_4.raw Medium LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 380 2.33 0.00 1 40 25 3 551.28113 1651.82883 -2.31 23.06 2474 2474 MS2 22/48 Linfeng_091311_rIgG_4.raw Medium LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 386 2.32 0.00 1 8 100 3 551.28546 1651.84183 5.56 24.93 1762 1762 MS2 23/48 Linfeng_20120125_PCAF_4.raw Medium LYKEELEQTYHAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 390 2.31 0.00 1 11 100 3 551.28601 1651.84348 6.55 24.86 1756 1756 MS2 22/48 Linfeng_20120125_PCAF_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 312 2.30 0.00 0 7 25 2 626.31293 1251.61858 -2.42 29.55 3366 3366 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 464 2.25 0.00 0 19 25 3 482.93259 1446.78321 2.28 31.88 3160 3160 MS2 16/48 Linfeng_122411_rIgG_4.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw High IGDTSVSYK Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 180 2.16 0.00 0 4 25 2 485.24658 969.48589 -2.98 20.91 2176 2176 MS2 13/16 Linfeng_091311_rIgG_4.raw High AGGPTTPLSPTR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 381 2.09 0.00 0 26 25 2 577.81049 1154.61370 -2.40 22.71 2425 2425 MS2 14/22 Linfeng_091311_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 440 2.08 0.00 0 23 25 2 723.89563 1446.78398 2.82 31.87 3159 3159 MS2 17/24 Linfeng_122411_rIgG_4.raw High NSQGEEVAQR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 170 2.07 0.00 0 41 25 2 559.26501 1117.52275 -0.48 12.63 1030 1030 MS2 14/18 Linfeng_091311_rIgG_4.raw High DAALATALGDK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 486 2.01 0.00 0 48 25 2 523.27820 1045.54912 -3.21 29.18 3317 3317 MS2 17/20 Linfeng_091311_rIgG_4.raw IPI00219038.9 Histone H3.3 39.71 8 1 5 8 36.82 39.71 5 8 0.00 136 15.3 11.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 8.07 0.00 0 7 4 3 1146.57715 3437.71689 3.54 54.43 6612 6612 MS2 39/124 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 6.98 0.00 0 4 3 4 860.18506 3437.71840 3.98 54.43 6611 6611 MS2 51/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 295 6.78 0.00 0 35 25 4 860.18134 3437.70351 -0.36 53.16 6484 6484 MS2 50/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 290 4.59 0.00 0 1 11 5 688.34906 3437.71619 3.33 54.44 6613 6613 MS2 65/248 Linfeng_091311_rIgG_10.raw High YQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 23 24 3 417.57394 1250.70728 -2.46 24.84 2814 2814 MS2 20/36 Linfeng_091311_rIgG_10.raw High RYQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 227 2.73 0.00 2 15 25 3 469.60736 1406.80753 -2.80 21.86 2395 2395 MS2 24/40 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw High STELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 2 510 2.06 0.00 0 47 25 2 416.24890 831.49053 -3.55 32.99 3934 3934 MS2 11/12 Linfeng_091311_rIgG_10.raw IPI00219420.3 Structural maintenance of chromosomes protein 3 15.94 1 16 16 22 20.75 7.15 7 7 35.18 9.61 9 11 10.52 3.53 3 4 1217 141.5 7.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KGDVEGSQSQDEGEGSGESER Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 13 4.78 0.00 1 20 25 3 722.97113 2166.89884 -1.40 14.59 1322 1322 MS2 38/80 Linfeng_091311_rIgG_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 335 4.15 0.00 0 24 25 3 619.64014 1856.90586 1.79 32.90 3148 3148 MS2 31/56 Linfeng_122411_rIgG_3.raw High NYLWREENAEQQALAAK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 358 4.14 0.00 1 34 25 3 678.67358 2034.00620 1.08 30.29 2810 2810 MS2 35/64 Linfeng_122411_rIgG_3.raw High NLEQYNKLDQDLNEVK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 400 4.14 0.00 1 8 23 3 654.99817 1962.97995 1.62 30.77 2872 2872 MS2 35/60 Linfeng_122411_rIgG_3.raw High LHTLEEEKEELAQYQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 366 3.63 0.00 1 14 25 3 663.33850 1988.00095 1.90 27.57 2450 2450 MS2 27/60 Linfeng_122411_rIgG_3.raw High KLEQcNTELKK Unambiguous 1 1 IPI00219420.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 3.51 0.00 2 31 25 3 464.24875 1390.73169 -3.05 14.57 1318 1318 MS2 23/40 Linfeng_091311_rIgG_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 312 3.25 0.00 0 16 25 2 928.95721 1856.90715 2.49 32.92 3151 3151 MS2 19/28 Linfeng_122411_rIgG_3.raw High LHTLEEEKEELAQYQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 372 3.19 0.00 1 13 25 4 497.75571 1988.00100 1.92 27.52 2445 2445 MS2 31/90 Linfeng_122411_rIgG_3.raw High KYEAIQLTFK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 336 3.07 0.00 1 17 25 3 414.23639 1240.69461 0.78 29.44 2696 2696 MS2 26/36 Linfeng_122411_rIgG_3.raw High SEDLDNSIDKTEAGIK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 327 3.04 0.00 1 14 100 2 867.92810 1734.84892 5.55 28.25 2342 2342 MS2 21/30 Linfeng_20120125_PCAF_2.raw High VDALNDEIR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 324 3.01 0.00 0 44 25 2 522.76569 1044.52410 -7.64 25.97 2922 2922 MS2 14/16 Linfeng_091311_rIgG_2.raw High DLQDELAGNSEQR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 179 2.84 0.00 0 23 25 3 492.23196 1474.68134 3.00 27.43 2433 2433 MS2 25/48 Linfeng_122411_rIgG_3.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 337 2.82 0.00 0 5 100 2 928.96106 1856.91484 6.63 38.98 4325 4325 MS2 20/28 Linfeng_20120125_PCAF_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 390 2.60 0.00 0 29 25 2 625.82422 1250.64116 2.86 26.02 2244 2244 MS2 15/18 Linfeng_122411_rIgG_3.raw Medium LHTLEEEKEELAQYQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 363 2.51 0.00 1 16 25 4 497.75336 1987.99160 -2.81 28.72 3299 3299 MS2 30/90 Linfeng_091311_rIgG_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 355 2.50 0.00 0 16 25 2 625.82050 1250.63371 -3.09 28.61 3283 3283 MS2 15/18 Linfeng_091311_rIgG_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 331 2.50 0.00 0 17 100 2 928.96112 1856.91496 6.70 38.85 4301 4301 MS2 17/28 Linfeng_20120125_PCAF_2.raw High EENAEQQALAAK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 238 2.36 0.00 0 10 25 2 651.31744 1301.62761 -4.33 21.90 2349 2349 MS2 18/22 Linfeng_091311_rIgG_2.raw High ALDQFVNFSEQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 344 2.17 0.00 0 8 100 2 713.35956 1425.71184 7.65 41.74 4853 4853 MS2 18/22 Linfeng_20120125_PCAF_2.raw High ELGSLPQEAFEK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 395 2.14 0.00 0 12 25 2 674.34418 1347.68108 1.44 31.30 2941 2941 MS2 18/22 Linfeng_122411_rIgG_3.raw High LAQATQER Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 612 2.07 0.00 0 29 25 2 458.74493 916.48259 -2.31 12.72 1058 1058 MS2 13/14 Linfeng_091311_rIgG_2.raw High NFSEVFQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 242 2.04 0.00 0 9 25 2 499.75189 998.49651 2.30 27.71 2469 2469 MS2 13/14 Linfeng_122411_rIgG_3.raw IPI00220327.4 "Keratin, type II cytoskeletal 1" 64.13 3 42 49 1695 1414.25 61.80 42 453 1751.22 54.81 36 508 2260.45 54.97 31 734 644 66.0 8.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 7.37 0.00 0 0 25 3 1104.77783 3312.31894 3.23 21.10 1848 1848 MS2 42/152 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 7.29 0.00 0 0 25 3 1104.77747 3312.31784 2.90 21.28 1814 1814 MS2 39/152 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 7.12 0.00 0 1 11 3 1104.76770 3312.28855 -5.94 22.08 2337 2337 MS2 36/152 Linfeng_091311_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.89 0.00 0 1 25 3 1104.76843 3312.29074 -5.28 22.03 2337 2337 MS2 40/152 Linfeng_091311_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.80 0.00 0 2 25 3 1104.77930 3312.32334 4.56 21.15 1699 1699 MS2 37/152 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.79 0.00 0 1 25 3 795.32471 2383.95957 3.19 19.88 1705 1705 MS2 44/120 Linfeng_122411_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.76 0.00 0 3 7 3 795.32074 2383.94767 -1.81 2.57 340 340 MS2 45/120 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.76 0.00 0 1 25 3 795.32507 2383.96067 3.65 19.98 1525 1525 MS2 48/120 Linfeng_122411_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.73 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.70 2155 2155 MS2 46/120 Linfeng_091311_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.66 0.00 0 4 25 3 795.32117 2383.94895 -1.27 20.73 2151 2151 MS2 45/120 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.66 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.89 2258 2258 MS2 44/120 Linfeng_091311_rIgG_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.66 0.00 0 0 25 3 1104.76904 3312.29258 -4.73 22.15 2319 2319 MS2 39/152 Linfeng_091311_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.60 0.00 0 1 25 3 795.32397 2383.95737 2.26 19.96 1662 1662 MS2 46/120 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 6.59 0.00 0 1 25 3 795.32568 2383.96250 4.42 19.97 1506 1506 MS2 42/120 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 271 6.54 0.00 1 5 21 3 978.17932 2932.52341 2.38 39.38 3976 3976 MS2 38/92 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.53 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.94 2191 2191 MS2 45/120 Linfeng_091311_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.40 0.00 0 1 12 3 795.32080 2383.94785 -1.73 20.65 2175 2175 MS2 46/120 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 6.39 0.00 1 13 25 3 978.17999 2932.52542 3.07 39.30 3986 3986 MS2 41/92 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.34 0.00 0 1 25 3 1104.77820 3312.32004 3.57 21.28 1646 1646 MS2 35/152 Linfeng_122411_rIgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.34 0.00 0 4 7 4 828.83362 3312.31264 1.33 3.84 401 401 MS2 63/228 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.29 0.00 0 0 15 3 795.31995 2383.94529 -2.80 20.91 2141 2141 MS2 47/120 Linfeng_091311_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 6.28 0.00 0 3 4 3 795.32294 2383.95426 0.96 3.64 370 370 MS2 46/120 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.27 0.00 0 3 25 3 1104.77173 3312.30063 -2.29 21.91 2064 2064 MS2 39/152 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.24 0.00 0 1 10 3 795.32007 2383.94565 -2.65 20.99 2232 2232 MS2 43/120 Linfeng_091311_rIgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.22 0.00 0 4 100 3 1104.78223 3312.33213 7.21 19.61 1385 1385 MS2 32/152 Linfeng_20120125_PCAF_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.22 0.00 0 1 17 3 795.32037 2383.94657 -2.27 20.94 2147 2147 MS2 47/120 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 268 6.07 0.00 1 15 25 3 978.18060 2932.52726 3.69 39.31 4101 4101 MS2 37/92 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.02 0.00 0 1 100 3 1104.78235 3312.33249 7.32 22.74 1749 1749 MS2 32/152 Linfeng_20120125_PCAF_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.00 0.00 0 2 100 3 1104.78198 3312.33139 6.99 19.66 1388 1388 MS2 39/152 Linfeng_20120125_PCAF_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.94 0.00 0 0 25 3 795.32037 2383.94657 -2.27 21.00 2170 2170 MS2 46/120 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 5.94 0.00 2 3 11 3 834.42328 2501.25528 1.35 29.78 2742 2742 MS2 40/84 Linfeng_122411_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.93 0.00 0 2 100 3 1104.78284 3312.33396 7.77 20.33 1338 1338 MS2 35/152 Linfeng_20120125_PCAF_1.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 338 5.93 0.00 2 3 4 3 834.42261 2501.25327 0.54 29.82 2779 2779 MS2 39/84 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.85 0.00 0 0 25 2 1192.47681 2383.94634 -2.36 20.66 2177 2177 MS2 26/60 Linfeng_091311_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.84 0.00 0 0 25 2 1192.47607 2383.94487 -2.98 20.95 2148 2148 MS2 26/60 Linfeng_091311_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.82 0.00 0 14 25 2 1192.47546 2383.94365 -3.49 2.40 317 317 MS2 26/60 Linfeng_091311_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.77 0.00 0 2 25 4 828.83636 3312.32363 4.65 21.16 1700 1700 MS2 63/228 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.77 0.00 0 0 25 3 795.32434 2383.95847 2.73 21.68 1752 1752 MS2 41/120 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.72 0.00 0 1 19 2 1192.47729 2383.94731 -1.95 20.78 2157 2157 MS2 26/60 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.72 0.00 0 3 25 3 795.32452 2383.95902 2.96 19.82 1460 1460 MS2 37/120 Linfeng_122411_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.70 0.00 0 0 25 2 1192.47192 2383.93657 -6.46 20.94 1930 1930 MS2 26/60 Linfeng_091311_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.69 0.00 0 1 100 3 1104.78076 3312.32773 5.89 20.39 1354 1354 MS2 33/152 Linfeng_20120125_PCAF_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.68 0.00 0 0 100 3 1104.78088 3312.32810 6.00 20.26 1329 1329 MS2 36/152 Linfeng_20120125_PCAF_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.68 0.00 0 1 25 3 795.32458 2383.95920 3.03 19.93 1458 1458 MS2 41/120 Linfeng_122411_rIgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.64 0.00 0 0 25 2 1192.47644 2383.94560 -2.67 20.96 2194 2194 MS2 26/60 Linfeng_091311_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.64 0.00 0 2 25 4 828.83563 3312.32070 3.76 21.11 1850 1850 MS2 56/228 Linfeng_122411_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.63 0.00 0 4 25 2 1192.47729 2383.94731 -1.95 20.76 2164 2164 MS2 27/60 Linfeng_091311_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.62 0.00 0 6 25 2 1192.47607 2383.94487 -2.98 21.01 2234 2234 MS2 27/60 Linfeng_091311_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 9 5.60 0.00 0 12 25 3 795.32538 2383.96158 4.03 19.82 1627 1627 MS2 35/120 Linfeng_122411_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.60 0.00 0 0 25 2 1192.48169 2383.95610 1.73 20.02 1669 1669 MS2 26/60 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.56 0.00 0 1 100 3 1104.78052 3312.32700 5.67 19.81 1314 1314 MS2 37/152 Linfeng_20120125_PCAF_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.54 0.00 0 2 25 2 1192.48438 2383.96147 3.99 19.87 1634 1634 MS2 23/60 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.54 0.00 0 0 100 3 1104.78076 3312.32773 5.89 19.75 1290 1290 MS2 38/152 Linfeng_20120125_PCAF_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.53 0.00 0 1 100 3 1104.78259 3312.33323 7.55 20.05 1311 1311 MS2 35/152 Linfeng_20120125_PCAF_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.53 0.00 0 2 25 3 795.32520 2383.96103 3.80 20.00 1557 1557 MS2 39/120 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.52 0.00 0 1 25 2 1192.48279 2383.95830 2.65 19.96 1461 1461 MS2 24/60 Linfeng_122411_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 5.52 0.00 2 4 25 3 834.42432 2501.25840 2.59 29.65 2870 2870 MS2 42/84 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 5.49 0.00 1 10 25 3 978.17999 2932.52542 3.07 39.45 4166 4166 MS2 35/92 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.47 0.00 0 2 100 3 1104.78271 3312.33359 7.66 20.10 1316 1316 MS2 37/152 Linfeng_20120125_PCAF_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.47 0.00 0 0 100 2 1192.48718 2383.96709 6.34 16.72 1164 1164 MS2 23/60 Linfeng_20120125_PCAF_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.46 0.00 0 0 25 2 1192.48315 2383.95903 2.96 19.92 1710 1710 MS2 24/60 Linfeng_122411_rIgG_5.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 5.45 0.00 2 8 25 3 728.71539 2184.13163 2.75 40.89 4171 4171 MS2 34/72 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 3 5.45 0.00 0 2 25 2 1192.47791 2383.94853 -1.44 20.86 2254 2254 MS2 27/60 Linfeng_091311_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 5.44 0.00 0 4 25 2 883.37445 1765.74162 3.86 27.49 2639 2639 MS2 28/38 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.44 0.00 0 0 100 3 1104.78137 3312.32956 6.44 19.36 1445 1445 MS2 35/152 Linfeng_20120125_PCAF_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.43 0.00 0 0 25 3 1104.77722 3312.31711 2.68 21.46 1697 1697 MS2 34/152 Linfeng_122411_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 5.42 0.00 0 2 25 4 828.83026 3312.29922 -2.72 21.75 2042 2042 MS2 54/228 Linfeng_091311_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.42 0.00 0 3 100 3 1104.78125 3312.32920 6.33 19.80 1264 1264 MS2 40/152 Linfeng_20120125_PCAF_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 5.40 0.00 2 5 2 3 728.71393 2184.12723 0.74 40.73 4509 4509 MS2 33/72 Linfeng_122411_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.38 0.00 0 0 100 2 1192.48730 2383.96733 6.44 16.77 1062 1062 MS2 28/60 Linfeng_20120125_PCAF_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.35 0.00 0 8 25 3 795.32599 2383.96341 4.80 21.55 1816 1816 MS2 37/120 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.34 0.00 0 2 100 3 1104.78210 3312.33176 7.10 22.68 1738 1738 MS2 37/152 Linfeng_20120125_PCAF_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 15 5.34 0.00 0 0 100 3 795.32855 2383.97110 8.03 16.74 1166 1166 MS2 40/120 Linfeng_20120125_PCAF_8.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 5.34 0.00 1 3 18 3 762.71454 2286.12906 1.82 31.97 3229 3229 MS2 37/76 Linfeng_122411_rIgG_6.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 5.31 0.00 1 3 19 3 762.71454 2286.12906 1.82 31.79 3036 3036 MS2 36/76 Linfeng_122411_rIgG_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 5.28 0.00 1 2 10 3 762.71497 2286.13034 2.38 31.67 2989 2989 MS2 36/76 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 5.25 0.00 0 4 100 3 795.32690 2383.96616 5.95 16.85 1071 1071 MS2 37/120 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 5.23 0.00 2 5 15 3 728.71246 2184.12284 -1.27 41.43 4901 4901 MS2 36/72 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 5.22 0.00 0 5 100 3 795.32733 2383.96744 6.49 16.86 1090 1090 MS2 38/120 Linfeng_20120125_PCAF_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.14 0.00 0 4 100 3 1104.78235 3312.33249 7.32 22.92 1779 1779 MS2 33/152 Linfeng_20120125_PCAF_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.13 0.00 0 1 100 3 1104.78113 3312.32883 6.22 20.26 1294 1294 MS2 40/152 Linfeng_20120125_PCAF_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 5.12 0.00 2 3 25 3 728.71539 2184.13163 2.75 40.89 3780 3780 MS2 36/72 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 5.12 0.00 2 3 25 3 728.71533 2184.13144 2.67 41.18 4138 4138 MS2 35/72 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 380 5.12 0.00 2 9 25 3 728.71570 2184.13254 3.17 40.95 4352 4352 MS2 34/72 Linfeng_122411_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 5.11 0.00 1 13 25 3 533.95013 1599.83585 1.31 33.71 3280 3280 MS2 30/52 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 5.10 0.00 2 3 25 3 728.71588 2184.13309 3.42 40.82 4179 4179 MS2 37/72 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 5.10 0.00 0 0 25 2 1192.48486 2383.96245 4.40 20.04 1463 1463 MS2 23/60 Linfeng_122411_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 15 5.10 0.00 0 5 100 3 795.32855 2383.97110 8.03 16.70 1195 1195 MS2 41/120 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 5.08 0.00 2 6 22 3 728.71228 2184.12229 -1.52 41.62 4901 4901 MS2 35/72 Linfeng_091311_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.08 0.00 0 0 25 3 795.32611 2383.96378 4.95 19.92 1583 1583 MS2 34/120 Linfeng_122411_rIgG_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 5.07 0.00 0 10 15 3 665.32898 1993.97239 -2.17 44.46 5242 5242 MS2 32/60 Linfeng_091311_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 5.07 0.00 0 5 100 3 795.32715 2383.96689 6.26 16.69 1213 1213 MS2 38/120 Linfeng_20120125_PCAF_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.06 0.00 0 5 100 3 1104.78320 3312.33506 8.10 22.84 1765 1765 MS2 33/152 Linfeng_20120125_PCAF_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 5.05 0.00 1 2 25 3 762.71521 2286.13108 2.70 31.71 3139 3139 MS2 37/76 Linfeng_122411_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 5.04 0.00 0 8 100 3 795.32739 2383.96762 6.57 16.81 1065 1065 MS2 38/120 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 5.04 0.00 0 2 25 2 883.37329 1765.73931 2.54 26.02 2270 2270 MS2 27/38 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.04 0.00 0 1 25 4 828.83527 3312.31923 3.32 21.21 1778 1778 MS2 54/228 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 5.03 0.00 0 5 25 2 883.36975 1765.73223 -1.47 28.87 3264 3264 MS2 29/38 Linfeng_091311_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.03 0.00 0 0 25 3 1104.77771 3312.31858 3.12 21.27 1573 1573 MS2 38/152 Linfeng_122411_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.02 0.00 0 0 25 3 1104.77673 3312.31565 2.24 21.15 1771 1771 MS2 35/152 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.02 0.00 0 0 100 3 1104.78235 3312.33249 7.32 20.27 1428 1428 MS2 39/152 Linfeng_20120125_PCAF_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 5.00 0.00 0 32 25 3 665.33301 1993.98447 3.89 43.52 4432 4432 MS2 33/60 Linfeng_122411_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 4.99 0.00 0 3 25 3 795.32513 2383.96085 3.72 20.00 1460 1460 MS2 41/120 Linfeng_122411_rIgG_1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 338 4.98 0.00 1 21 25 3 762.71423 2286.12815 1.42 31.68 2865 2865 MS2 34/76 Linfeng_122411_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 4.95 0.00 2 3 25 3 834.42426 2501.25821 2.52 29.78 2943 2943 MS2 40/84 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.94 0.00 0 2 100 2 1192.48706 2383.96684 6.24 16.70 1214 1214 MS2 25/60 Linfeng_20120125_PCAF_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 4.89 0.00 0 26 25 3 795.32135 2383.94950 -1.04 19.04 1670 1670 MS2 31/120 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.89 0.00 0 29 21 3 795.31787 2383.93906 -5.42 20.93 1929 1929 MS2 40/120 Linfeng_091311_rIgG_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 4.89 0.00 0 29 20 3 665.33051 1993.97696 0.13 43.14 4837 4837 MS2 31/60 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.88 0.00 0 0 100 3 1104.78113 3312.32883 6.22 20.39 1515 1515 MS2 37/152 Linfeng_20120125_PCAF_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.85 0.00 0 5 25 2 1192.48254 2383.95781 2.45 19.97 1523 1523 MS2 22/60 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 4.84 0.00 2 4 25 2 1092.56958 2184.13188 2.87 41.02 4203 4203 MS2 27/36 Linfeng_122411_rIgG_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 4.82 0.00 2 2 100 3 834.42847 2501.27085 7.57 39.51 4942 4942 MS2 39/84 Linfeng_20120125_PCAF_6.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 4.82 0.00 2 10 11 3 728.71130 2184.11936 -2.86 41.30 4951 4951 MS2 35/72 Linfeng_091311_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.81 0.00 0 0 100 3 1104.78027 3312.32627 5.45 20.22 1503 1503 MS2 34/152 Linfeng_20120125_PCAF_6.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 4.79 0.00 2 7 25 4 546.78857 2184.13247 3.14 40.84 4181 4181 MS2 48/108 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.79 0.00 0 3 25 2 883.36902 1765.73076 -2.30 28.96 3258 3258 MS2 28/38 Linfeng_091311_rIgG_7.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 329 4.79 0.00 1 8 25 4 572.28735 2286.12758 1.17 31.71 2994 2994 MS2 50/114 Linfeng_122411_rIgG_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 4.79 0.00 1 14 25 3 762.71075 2286.11771 -3.15 32.83 3785 3785 MS2 31/76 Linfeng_091311_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 4.78 0.00 0 0 100 2 1192.48755 2383.96782 6.65 16.82 1068 1068 MS2 23/60 Linfeng_20120125_PCAF_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 4.75 0.00 0 17 25 3 665.32892 1993.97220 -2.26 44.08 5233 5233 MS2 32/60 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 12 4.75 0.00 0 0 100 2 1192.48645 2383.96562 5.73 16.76 1103 1103 MS2 27/60 Linfeng_20120125_PCAF_4.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 4.75 0.00 2 4 12 3 728.71747 2184.13785 5.60 55.31 7768 7768 MS2 34/72 Linfeng_20120125_PCAF_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 12 4.74 0.00 0 0 100 2 1192.48718 2383.96709 6.34 16.69 1193 1193 MS2 24/60 Linfeng_20120125_PCAF_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.74 0.00 0 3 100 3 1104.78162 3312.33030 6.66 19.73 1258 1258 MS2 35/152 Linfeng_20120125_PCAF_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.72 0.00 0 0 100 3 1104.78064 3312.32737 5.78 19.59 1275 1275 MS2 37/152 Linfeng_20120125_PCAF_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.71 0.00 0 1 25 2 883.36890 1765.73052 -2.43 28.93 3252 3252 MS2 28/38 Linfeng_091311_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.71 0.00 0 1 25 3 1104.77808 3312.31968 3.45 21.26 1560 1560 MS2 36/152 Linfeng_122411_rIgG_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 4.71 0.00 0 12 25 3 665.33173 1993.98062 1.96 43.48 4507 4507 MS2 31/60 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 54 4.70 0.00 0 4 100 2 883.37756 1765.74785 7.38 31.13 2663 2663 MS2 28/38 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 4.70 0.00 1 14 25 3 783.74707 2349.22666 3.47 51.33 5508 5508 MS2 32/80 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.70 0.00 0 1 25 2 883.37256 1765.73784 1.71 26.68 2475 2475 MS2 28/38 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.70 0.00 0 2 25 4 828.83557 3312.32046 3.69 21.29 1816 1816 MS2 50/228 Linfeng_122411_rIgG_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 4.68 0.00 0 27 25 3 665.33276 1993.98374 3.52 43.20 4589 4589 MS2 31/60 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 4.66 0.00 0 14 25 3 665.33264 1993.98337 3.34 43.39 4504 4504 MS2 33/60 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 4.66 0.00 1 4 7 3 533.94794 1599.82926 -2.81 34.53 4003 4003 MS2 31/52 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 249 4.66 0.00 0 15 15 3 553.26813 1657.78983 -1.88 28.61 2588 2588 MS2 34/64 Linfeng_122411_rIgG_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 4.63 0.00 0 13 25 3 665.32910 1993.97275 -1.99 44.34 5239 5239 MS2 29/60 Linfeng_091311_rIgG_6.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 4.62 0.00 2 16 100 3 834.42865 2501.27140 7.79 38.88 4339 4339 MS2 36/84 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.62 0.00 0 7 25 2 883.37305 1765.73882 2.27 27.10 2416 2416 MS2 28/38 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.61 0.00 0 0 100 3 1104.78223 3312.33213 7.21 22.78 1757 1757 MS2 36/152 Linfeng_20120125_PCAF_10.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 4.61 0.00 2 14 25 3 728.71600 2184.13346 3.59 40.70 4275 4275 MS2 34/72 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.61 0.00 0 2 25 2 883.36932 1765.73137 -1.95 28.66 3254 3254 MS2 29/38 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 4.60 0.00 0 5 25 2 883.37378 1765.74028 3.10 27.80 2623 2623 MS2 29/38 Linfeng_122411_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 4.59 0.00 1 4 3 3 533.94910 1599.83274 -0.63 33.51 3514 3514 MS2 31/52 Linfeng_122411_rIgG_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 4.59 0.00 1 3 11 3 533.94800 1599.82944 -2.69 34.40 4002 4002 MS2 31/52 Linfeng_091311_rIgG_4.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 4.57 0.00 1 73 25 3 762.71082 2286.11789 -3.07 32.56 3774 3774 MS2 29/76 Linfeng_091311_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 4.56 0.00 0 3 25 3 795.32477 2383.95975 3.26 21.44 1835 1835 MS2 37/120 Linfeng_122411_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 4.56 0.00 1 25 25 3 533.94989 1599.83512 0.85 33.63 3386 3386 MS2 32/52 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.55 0.00 0 10 25 2 883.36890 1765.73052 -2.43 4.78 565 565 MS2 27/38 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 4.55 0.00 0 5 4 3 572.95630 1716.85434 1.84 29.71 2763 2763 MS2 33/56 Linfeng_122411_rIgG_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 4.54 0.00 1 5 100 3 762.71814 2286.13987 6.54 39.20 4703 4703 MS2 31/76 Linfeng_20120125_PCAF_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.54 0.00 0 12 25 3 665.33258 1993.98319 3.25 43.44 4666 4666 MS2 30/60 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.54 0.00 0 7 25 2 883.37286 1765.73845 2.06 27.66 2245 2245 MS2 26/38 Linfeng_122411_rIgG_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 4.53 0.00 2 5 25 4 546.78827 2184.13125 2.58 40.88 4170 4170 MS2 49/108 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 4.53 0.00 2 11 25 4 546.78833 2184.13149 2.69 40.67 4272 4272 MS2 47/108 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 4.52 0.00 0 11 25 3 665.32922 1993.97312 -1.80 44.06 5232 5232 MS2 31/60 Linfeng_091311_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.52 0.00 0 0 100 3 1104.78101 3312.32846 6.11 20.30 1431 1431 MS2 33/152 Linfeng_20120125_PCAF_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.52 0.00 0 16 23 3 572.95630 1716.85434 1.84 28.43 2429 2429 MS2 29/56 Linfeng_122411_rIgG_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.52 0.00 0 0 100 3 1104.78064 3312.32737 5.78 22.98 1786 1786 MS2 36/152 Linfeng_20120125_PCAF_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.52 0.00 0 0 100 3 1104.78125 3312.32920 6.33 20.44 1347 1347 MS2 39/152 Linfeng_20120125_PCAF_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.51 0.00 0 0 25 2 1192.48291 2383.95854 2.76 19.90 1468 1468 MS2 24/60 Linfeng_122411_rIgG_9.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 4.51 0.00 1 3 25 3 533.95044 1599.83677 1.88 33.60 3238 3238 MS2 31/52 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 4.50 0.00 1 1 22 3 533.94739 1599.82761 -3.84 34.31 4044 4044 MS2 31/52 Linfeng_091311_rIgG_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 354 4.50 0.00 2 19 100 3 834.42841 2501.27066 7.50 38.81 4324 4324 MS2 35/84 Linfeng_20120125_PCAF_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 4.48 0.00 1 5 25 4 572.28760 2286.12856 1.60 31.91 3051 3051 MS2 46/114 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 4.48 0.00 2 2 44 3 728.71710 2184.13675 5.10 55.32 7062 7062 MS2 32/72 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 4.48 0.00 1 21 25 3 533.94855 1599.83109 -1.66 4.06 413 413 MS2 30/52 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 4.47 0.00 1 0 25 2 1175.11768 2349.22807 4.08 51.40 5517 5517 MS2 21/40 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 4.46 0.00 2 5 54 3 728.71808 2184.13968 6.44 55.31 8200 8200 MS2 33/72 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.44 0.00 0 3 1 3 572.95624 1716.85416 1.74 3.09 274 274 MS2 33/56 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 4.43 0.00 2 1 2 4 546.78705 2184.12636 0.34 40.74 4510 4510 MS2 45/108 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.43 0.00 0 72 100 3 1104.78174 3312.33066 6.77 20.49 1353 1353 MS2 37/152 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.43 0.00 0 4 25 2 883.37164 1765.73601 0.68 25.14 2371 2371 MS2 28/38 Linfeng_122411_rIgG_5.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 155 4.43 0.00 1 3 8 3 563.32898 1687.97239 1.30 31.57 2976 2976 MS2 32/64 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.41 0.00 0 6 25 2 883.37311 1765.73894 2.34 27.13 2393 2393 MS2 26/38 Linfeng_122411_rIgG_3.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 157 4.39 0.00 1 5 25 3 563.32910 1687.97275 1.52 31.75 3201 3201 MS2 32/64 Linfeng_122411_rIgG_6.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 4.39 0.00 1 35 25 3 762.71539 2286.13163 2.94 31.66 2769 2769 MS2 30/76 Linfeng_122411_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.39 0.00 0 12 100 3 1104.78210 3312.33176 7.10 23.08 1802 1802 MS2 32/152 Linfeng_20120125_PCAF_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.38 0.00 0 7 100 3 1104.78198 3312.33139 6.99 20.20 1428 1428 MS2 36/152 Linfeng_20120125_PCAF_8.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 4.36 0.00 2 6 100 3 834.42950 2501.27396 8.81 39.26 4627 4627 MS2 35/84 Linfeng_20120125_PCAF_9.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 4.36 0.00 2 0 100 3 834.42688 2501.26609 5.67 38.89 4539 4539 MS2 33/84 Linfeng_20120125_PCAF_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.35 0.00 0 8 25 2 883.36920 1765.73113 -2.09 28.89 3215 3215 MS2 27/38 Linfeng_091311_rIgG_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 4.35 0.00 1 4 10 3 533.94769 1599.82853 -3.27 34.42 3751 3751 MS2 30/52 Linfeng_091311_rIgG_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 4.34 0.00 0 32 25 3 553.26978 1657.79477 1.10 28.60 2618 2618 MS2 37/64 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 4.34 0.00 1 16 25 2 971.49963 1941.99199 2.20 41.03 3797 3797 MS2 25/32 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 4.33 0.00 2 2 28 3 728.71643 2184.13474 4.18 55.32 7321 7321 MS2 31/72 Linfeng_20120125_PCAF_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.33 0.00 0 8 100 3 1104.78162 3312.33030 6.66 20.42 1306 1306 MS2 35/152 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 4.33 0.00 0 16 25 2 883.37372 1765.74016 3.03 28.49 2603 2603 MS2 27/38 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 251 4.33 0.00 0 10 25 3 553.26764 1657.78836 -2.76 29.10 2521 2521 MS2 34/64 Linfeng_122411_rIgG_10.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 4.32 0.00 1 25 10 3 615.65283 1844.94394 -1.20 4.13 448 448 MS2 30/60 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 4.31 0.00 0 34 100 2 738.40143 1475.79558 6.95 29.07 2482 2482 MS2 20/22 Linfeng_20120125_PCAF_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 4.31 0.00 0 29 25 3 553.26965 1657.79441 0.88 28.71 2746 2746 MS2 32/64 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 4.30 0.00 0 18 25 3 589.25122 1765.73911 2.43 26.11 2282 2282 MS2 44/76 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.29 0.00 0 2 100 3 1104.78210 3312.33176 7.10 19.51 1376 1376 MS2 35/152 Linfeng_20120125_PCAF_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 12 4.29 0.00 0 0 100 2 1192.48755 2383.96782 6.65 16.79 1085 1085 MS2 23/60 Linfeng_20120125_PCAF_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 4.28 0.00 0 6 100 3 795.32733 2383.96744 6.49 16.84 1270 1270 MS2 37/120 Linfeng_20120125_PCAF_6.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 4.28 0.00 2 4 25 4 546.78809 2184.13051 2.24 40.90 3781 3781 MS2 48/108 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 4.28 0.00 1 4 14 4 733.88654 2932.52431 2.69 39.37 3975 3975 MS2 41/138 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.27 0.00 0 18 25 3 589.25116 1765.73893 2.33 26.17 2264 2264 MS2 42/76 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.27 0.00 0 0 25 2 883.37372 1765.74016 3.03 28.55 2245 2245 MS2 23/38 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.27 0.00 0 1 25 2 883.36920 1765.73113 -2.09 28.66 3247 3247 MS2 29/38 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.26 0.00 0 2 25 2 883.36847 1765.72966 -2.92 28.79 2997 2997 MS2 28/38 Linfeng_091311_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.26 0.00 0 0 100 3 1104.78186 3312.33103 6.88 23.03 1791 1791 MS2 35/152 Linfeng_20120125_PCAF_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.25 0.00 0 3 25 2 883.37189 1765.73650 0.95 27.63 2321 2321 MS2 28/38 Linfeng_122411_rIgG_10.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 4.25 0.00 1 13 25 3 615.65143 1844.93973 -3.48 27.31 3053 3053 MS2 32/60 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 380 4.25 0.00 0 43 25 3 572.95679 1716.85581 2.69 29.55 2856 2856 MS2 29/56 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 4.22 0.00 0 9 25 3 665.33173 1993.98062 1.96 43.55 4116 4116 MS2 29/60 Linfeng_122411_rIgG_7.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.20 0.00 0 0 100 3 1104.78235 3312.33249 7.32 22.88 1772 1772 MS2 37/152 Linfeng_20120125_PCAF_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 4.20 0.00 0 3 25 3 855.72968 2565.17447 2.95 25.99 2240 2240 MS2 36/100 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.19 0.00 0 34 98 2 738.40088 1475.79448 6.21 27.83 2583 2583 MS2 20/22 Linfeng_20120125_PCAF_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 298 4.18 0.00 0 12 25 2 997.49054 1993.97380 -1.46 44.36 5267 5267 MS2 21/30 Linfeng_091311_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 4.18 0.00 0 30 25 3 665.32916 1993.97293 -1.89 44.43 5344 5344 MS2 30/60 Linfeng_091311_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.18 0.00 0 46 25 2 883.36865 1765.73003 -2.71 29.66 3426 3426 MS2 26/38 Linfeng_091311_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 48 4.17 0.00 0 2 100 2 883.37732 1765.74736 7.11 30.74 2760 2760 MS2 29/38 Linfeng_20120125_PCAF_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.17 0.00 0 4 25 3 589.25073 1765.73764 1.60 27.52 2643 2643 MS2 46/76 Linfeng_122411_rIgG_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 4.17 0.00 0 9 22 3 665.33398 1993.98740 5.36 55.25 7748 7748 MS2 34/60 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 4.16 0.00 0 30 100 2 883.37793 1765.74858 7.80 30.44 2688 2688 MS2 27/38 Linfeng_20120125_PCAF_9.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 332 4.16 0.00 0 2 11 2 997.49689 1993.98650 4.91 55.24 7746 7746 MS2 21/30 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 4.16 0.00 0 4 100 2 883.37720 1765.74712 6.97 31.75 2942 2942 MS2 26/38 Linfeng_20120125_PCAF_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 4.16 0.00 0 18 25 2 829.40289 1657.79851 3.36 27.03 2241 2241 MS2 20/32 Linfeng_122411_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 4.16 0.00 0 2 100 2 883.37677 1765.74626 6.48 29.72 2585 2585 MS2 27/38 Linfeng_20120125_PCAF_4.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 4.16 0.00 1 8 25 2 971.49908 1941.99089 1.64 41.10 4212 4212 MS2 24/32 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 4.15 0.00 0 34 100 2 738.40063 1475.79399 5.88 29.06 2315 2315 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 414 4.15 0.00 0 40 100 2 738.40167 1475.79607 7.28 28.89 2395 2395 MS2 20/22 Linfeng_20120125_PCAF_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.15 0.00 0 3 100 3 1104.78162 3312.33030 6.66 20.38 1303 1303 MS2 35/152 Linfeng_20120125_PCAF_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 4.14 0.00 2 12 25 3 728.71216 2184.12192 -1.69 41.40 4902 4902 MS2 32/72 Linfeng_091311_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 137 4.14 0.00 0 2 100 3 855.73364 2565.18637 7.59 28.52 2277 2277 MS2 34/100 Linfeng_20120125_PCAF_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 4.14 0.00 1 51 25 3 615.65094 1844.93827 -4.27 27.12 2769 2769 MS2 34/60 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 4.13 0.00 1 29 25 4 588.06195 2349.22597 3.18 51.43 5520 5520 MS2 45/120 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 4.13 0.00 0 2 37 2 883.37646 1765.74565 6.14 30.54 3230 3230 MS2 29/38 Linfeng_20120125_PCAF_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 4.13 0.00 0 4 25 3 553.26929 1657.79331 0.22 25.38 2026 2026 MS2 32/64 Linfeng_122411_rIgG_10.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 154 4.12 0.00 1 15 25 3 563.32965 1687.97440 2.49 31.50 3112 3112 MS2 33/64 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 4.12 0.00 0 11 25 3 665.33240 1993.98264 2.97 43.60 4280 4280 MS2 26/60 Linfeng_122411_rIgG_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 454 4.12 0.00 1 39 25 3 615.65186 1844.94101 -2.78 27.31 3029 3029 MS2 31/60 Linfeng_091311_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 4.11 0.00 2 6 25 4 546.78809 2184.13051 2.24 41.19 4139 4139 MS2 47/108 Linfeng_122411_rIgG_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 4.11 0.00 0 37 100 2 829.40601 1657.80474 7.11 32.25 3256 3256 MS2 20/32 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 4.11 0.00 0 4 5 3 572.95624 1716.85416 1.74 29.68 2729 2729 MS2 34/56 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 4.11 0.00 0 44 25 2 883.37299 1765.73870 2.20 26.11 2256 2256 MS2 29/38 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 4.11 0.00 0 3 100 2 1192.48621 2383.96514 5.52 16.81 1267 1267 MS2 25/60 Linfeng_20120125_PCAF_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 4.10 0.00 0 15 100 2 829.40582 1657.80437 6.89 32.38 2906 2906 MS2 20/32 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 4.10 0.00 0 3 100 2 883.37714 1765.74700 6.90 30.16 2843 2843 MS2 25/38 Linfeng_20120125_PCAF_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 4.10 0.00 0 52 100 2 829.40588 1657.80449 6.97 32.25 3095 3095 MS2 21/32 Linfeng_20120125_PCAF_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 250 4.10 0.00 0 12 25 2 829.39972 1657.79216 -0.47 28.69 2743 2743 MS2 22/32 Linfeng_122411_rIgG_4.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 4.10 0.00 2 37 100 3 728.71735 2184.13749 5.44 55.80 7435 7435 MS2 27/72 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.10 0.00 0 8 25 2 883.36896 1765.73064 -2.37 28.63 3286 3286 MS2 27/38 Linfeng_091311_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 4.09 0.00 1 0 100 3 533.95160 1599.84024 4.06 42.66 6348 6348 MS2 30/52 Linfeng_20120125_PCAF_8.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 4.09 0.00 1 15 100 3 615.65845 1844.96079 7.93 31.29 2848 2848 MS2 27/60 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 4.09 0.00 1 10 25 4 733.88715 2932.52675 3.52 39.29 3985 3985 MS2 41/138 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 45 4.09 0.00 0 10 100 2 883.37738 1765.74748 7.17 32.04 3264 3264 MS2 28/38 Linfeng_20120125_PCAF_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.09 0.00 0 21 25 3 589.25049 1765.73691 1.19 26.69 2477 2477 MS2 46/76 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.08 0.00 0 0 25 2 883.36700 1765.72673 -4.58 28.79 3367 3367 MS2 27/38 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 4.08 0.00 0 9 6 3 572.95337 1716.84555 -3.28 30.82 3271 3271 MS2 33/56 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.08 0.00 0 49 100 2 738.40100 1475.79473 6.37 28.54 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 4.08 0.00 2 22 100 3 834.42798 2501.26938 6.98 40.21 5106 5106 MS2 36/84 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 48 4.06 0.00 0 3 100 2 883.37775 1765.74822 7.59 30.11 2483 2483 MS2 28/38 Linfeng_20120125_PCAF_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 4.06 0.00 0 20 25 2 997.49017 1993.97307 -1.83 44.17 5314 5314 MS2 21/30 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.06 0.00 0 13 42 2 738.40063 1475.79399 5.88 27.70 2555 2555 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 4.06 0.00 1 3 20 3 533.94812 1599.82981 -2.47 34.62 4005 4005 MS2 29/52 Linfeng_091311_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.06 0.00 0 30 25 2 883.37128 1765.73528 0.26 27.78 2425 2425 MS2 25/38 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 4.06 0.00 2 43 100 3 728.71985 2184.14499 8.87 55.54 8258 8258 MS2 24/72 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 4.05 0.00 0 35 100 2 738.40100 1475.79473 6.37 27.97 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.05 0.00 0 33 100 2 738.40045 1475.79363 5.63 27.85 2450 2450 MS2 20/22 Linfeng_20120125_PCAF_6.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 4.04 0.00 2 23 100 3 834.43018 2501.27597 9.62 38.49 4703 4703 MS2 36/84 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 4.04 0.00 0 5 25 3 589.25189 1765.74112 3.57 27.67 2147 2147 MS2 40/76 Linfeng_122411_rIgG_7.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 4.03 0.00 1 14 100 3 762.71826 2286.14023 6.70 39.46 4460 4460 MS2 35/76 Linfeng_20120125_PCAF_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 4.03 0.00 0 12 25 3 665.32959 1993.97422 -1.25 43.88 5029 5029 MS2 32/60 Linfeng_091311_rIgG_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 256 4.03 0.00 0 26 100 2 829.40570 1657.80412 6.75 32.32 3112 3112 MS2 20/32 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 4.02 0.00 0 37 100 2 738.40094 1475.79460 6.29 28.65 2869 2869 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 4.02 0.00 0 12 25 3 589.25153 1765.74002 2.95 27.63 2458 2458 MS2 44/76 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 4.02 0.00 0 2 100 2 883.37726 1765.74724 7.04 29.71 2586 2586 MS2 29/38 Linfeng_20120125_PCAF_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 4.02 0.00 0 10 25 3 855.72943 2565.17374 2.66 25.99 2439 2439 MS2 34/100 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 30 4.02 0.00 0 8 25 2 883.37195 1765.73662 1.02 27.12 2634 2634 MS2 28/38 Linfeng_122411_rIgG_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 4.00 0.00 0 12 25 3 665.32977 1993.97477 -0.98 44.37 5397 5397 MS2 30/60 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 4.00 0.00 0 13 3 3 572.95471 1716.84958 -0.93 29.45 2957 2957 MS2 31/56 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 4.00 0.00 1 0 25 3 783.74719 2349.22702 3.63 51.42 5590 5590 MS2 34/80 Linfeng_122411_rIgG_4.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 4.00 0.00 1 12 25 4 588.06201 2349.22622 3.28 51.36 5512 5512 MS2 47/120 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 291 4.00 0.00 2 13 61 2 1092.57349 2184.13970 6.45 55.32 7771 7771 MS2 27/36 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 324 3.99 0.00 0 36 25 3 572.95355 1716.84610 -2.96 30.97 3542 3542 MS2 32/56 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 430 3.99 0.00 0 35 100 2 738.40155 1475.79582 7.12 27.90 2225 2225 MS2 19/22 Linfeng_20120125_PCAF_9.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.99 0.00 2 7 100 3 834.42810 2501.26975 7.13 39.68 4503 4503 MS2 35/84 Linfeng_20120125_PCAF_7.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 158 3.99 0.00 1 17 25 3 563.32904 1687.97257 1.41 31.61 3012 3012 MS2 27/64 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 3.98 0.00 1 11 25 3 783.74738 2349.22757 3.86 51.41 5518 5518 MS2 35/80 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 3.97 0.00 0 5 100 3 855.73352 2565.18601 7.45 28.86 2388 2388 MS2 34/100 Linfeng_20120125_PCAF_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 3.97 0.00 2 39 25 3 728.71539 2184.13163 2.75 41.24 4388 4388 MS2 28/72 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.97 0.00 0 4 100 2 883.37701 1765.74675 6.76 30.38 2551 2551 MS2 28/38 Linfeng_20120125_PCAF_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.97 0.00 1 40 25 3 615.65118 1844.93900 -3.88 26.91 3051 3051 MS2 33/60 Linfeng_091311_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.96 0.00 0 0 100 3 1104.78137 3312.32956 6.44 19.99 1412 1412 MS2 33/152 Linfeng_20120125_PCAF_8.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 3.96 0.00 0 20 100 3 665.33557 1993.99216 7.75 55.58 7836 7836 MS2 30/60 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.96 0.00 0 9 100 2 883.37439 1765.74150 3.79 32.86 3790 3790 MS2 29/38 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 3.96 0.00 0 5 3 3 572.95331 1716.84537 -3.38 30.74 3572 3572 MS2 31/56 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.95 0.00 0 36 100 2 738.40094 1475.79460 6.29 28.05 2304 2304 MS2 20/22 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 371 3.95 0.00 2 18 100 3 728.71765 2184.13840 5.86 55.52 7112 7112 MS2 27/72 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.95 0.00 0 2 100 2 883.37714 1765.74700 6.90 30.48 2571 2571 MS2 29/38 Linfeng_20120125_PCAF_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 3.95 0.00 0 8 25 2 883.37109 1765.73491 0.05 4.57 489 489 MS2 28/38 Linfeng_122411_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 3.95 0.00 0 4 100 2 883.37823 1765.74919 8.14 30.31 2662 2662 MS2 28/38 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.95 0.00 0 38 100 2 738.40149 1475.79570 7.03 28.91 2398 2398 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.94 0.00 0 41 100 2 738.40088 1475.79448 6.21 28.61 2861 2861 MS2 20/22 Linfeng_20120125_PCAF_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.93 0.00 0 2 20 2 997.49847 1993.98967 6.50 55.23 8174 8174 MS2 23/30 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 3.93 0.00 0 1 100 2 883.37738 1765.74748 7.17 29.84 2437 2437 MS2 26/38 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 3.93 0.00 0 2 18 2 883.36957 1765.73186 -1.67 4.22 457 457 MS2 27/38 Linfeng_122411_rIgG_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.93 0.00 0 25 100 3 1104.78149 3312.32993 6.55 19.60 1278 1278 MS2 32/152 Linfeng_20120125_PCAF_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.93 0.00 0 3 25 3 1104.78027 3312.32627 5.45 21.43 1551 1551 MS2 30/152 Linfeng_122411_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 125 3.92 0.00 0 8 48 3 855.73224 2565.18216 5.95 28.13 2654 2654 MS2 39/100 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.92 0.00 0 4 2 2 738.40009 1475.79289 5.13 26.66 2303 2303 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 3.92 0.00 0 27 100 2 883.37689 1765.74651 6.62 30.67 3349 3349 MS2 27/38 Linfeng_20120125_PCAF_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 3.92 0.00 0 37 100 2 829.40533 1657.80339 6.30 32.21 3630 3630 MS2 21/32 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.92 0.00 0 34 100 2 738.40167 1475.79607 7.28 28.81 2272 2272 MS2 20/22 Linfeng_20120125_PCAF_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.90 0.00 0 10 25 3 665.32904 1993.97257 -2.08 44.37 5237 5237 MS2 30/60 Linfeng_091311_rIgG_9.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 310 3.90 0.00 1 8 18 3 762.71033 2286.11643 -3.71 32.79 3532 3532 MS2 31/76 Linfeng_091311_rIgG_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 453 3.90 0.00 1 10 19 3 615.65192 1844.94120 -2.69 27.05 3026 3026 MS2 33/60 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.89 0.00 0 5 97 2 738.40143 1475.79558 6.95 27.68 2418 2418 MS2 20/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 3.89 0.00 1 13 25 3 783.74475 2349.21970 0.51 52.71 6291 6291 MS2 35/80 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.88 0.00 0 1 99 2 738.40143 1475.79558 6.95 27.72 2087 2087 MS2 20/22 Linfeng_20120125_PCAF_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 283 3.87 0.00 1 0 100 2 1143.57373 2286.14018 6.68 39.08 4839 4839 MS2 22/38 Linfeng_20120125_PCAF_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 3.87 0.00 0 27 25 3 665.32922 1993.97312 -1.80 44.46 5248 5248 MS2 30/60 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 3.86 0.00 1 2 25 4 588.06195 2349.22597 3.18 51.50 5908 5908 MS2 46/120 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 3.86 0.00 0 13 100 2 883.37671 1765.74614 6.41 31.78 2995 2995 MS2 26/38 Linfeng_20120125_PCAF_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 124 3.86 0.00 0 15 100 3 855.73242 2565.18271 6.16 29.13 2893 2893 MS2 34/100 Linfeng_20120125_PCAF_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.86 0.00 0 7 7 2 679.34894 1357.69060 -3.87 33.37 3608 3608 MS2 20/22 Linfeng_091311_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 3.85 0.00 0 6 100 2 883.37683 1765.74639 6.55 29.64 2439 2439 MS2 24/38 Linfeng_20120125_PCAF_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 3.85 0.00 0 2 100 2 883.37708 1765.74687 6.83 30.45 2566 2566 MS2 29/38 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 3.84 0.00 0 5 25 2 829.40344 1657.79961 4.02 25.92 2019 2019 MS2 21/32 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 3.84 0.00 0 3 39 2 883.37628 1765.74529 5.93 29.53 2983 2983 MS2 29/38 Linfeng_20120125_PCAF_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 3.84 0.00 0 0 66 2 997.49500 1993.98271 3.01 55.24 7039 7039 MS2 21/30 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.84 0.00 0 3 6 2 738.40247 1475.79766 8.36 26.74 2428 2428 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 3.83 0.00 0 26 100 2 883.37646 1765.74565 6.14 28.71 2418 2418 MS2 24/38 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.83 0.00 0 33 100 2 738.40210 1475.79692 7.86 28.80 2436 2436 MS2 20/22 Linfeng_20120125_PCAF_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.83 0.00 2 2 25 4 626.07025 2501.25918 2.90 30.03 2419 2419 MS2 38/126 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.83 0.00 0 16 25 2 883.36823 1765.72917 -3.20 28.98 3324 3324 MS2 28/38 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.83 0.00 0 17 100 2 738.40173 1475.79619 7.36 29.69 2769 2769 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 3.83 0.00 0 5 100 2 883.37695 1765.74663 6.69 29.82 2782 2782 MS2 28/38 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 3.81 0.00 0 15 25 3 572.95349 1716.84592 -3.06 30.66 3522 3522 MS2 28/56 Linfeng_091311_rIgG_3.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.81 0.00 1 16 100 3 615.65845 1844.96079 7.93 31.25 2839 2839 MS2 26/60 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 3.80 0.00 0 49 100 2 829.40649 1657.80571 7.70 32.37 3342 3342 MS2 20/32 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.79 0.00 0 27 100 2 738.40155 1475.79582 7.12 28.04 2147 2147 MS2 20/22 Linfeng_20120125_PCAF_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 3.79 0.00 2 36 100 3 834.42847 2501.27085 7.57 39.05 4667 4667 MS2 35/84 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 3.79 0.00 0 31 100 2 738.40143 1475.79558 6.95 28.11 2503 2503 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.79 0.00 0 8 100 2 738.40204 1475.79680 7.78 27.77 2669 2669 MS2 20/22 Linfeng_20120125_PCAF_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 3.79 0.00 0 3 25 3 855.72504 2565.16056 -2.47 27.03 3024 3024 MS2 36/100 Linfeng_091311_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 3.79 0.00 0 2 100 2 883.37683 1765.74639 6.55 29.61 2435 2435 MS2 27/38 Linfeng_20120125_PCAF_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 3.78 0.00 0 10 100 2 883.37787 1765.74846 7.73 29.61 2528 2528 MS2 28/38 Linfeng_20120125_PCAF_9.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.78 0.00 0 21 25 2 997.49017 1993.97307 -1.83 44.12 5061 5061 MS2 21/30 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.78 0.00 0 5 13 2 679.34949 1357.69170 -3.06 33.60 3873 3873 MS2 20/22 Linfeng_091311_rIgG_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 3.78 0.00 0 19 25 3 665.32916 1993.97293 -1.89 43.87 5276 5276 MS2 31/60 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.78 0.00 0 4 19 2 651.86310 1302.71892 2.86 43.73 4702 4702 MS2 19/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.78 0.00 0 2 92 2 738.40106 1475.79485 6.45 27.63 2227 2227 MS2 20/22 Linfeng_20120125_PCAF_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.78 0.00 0 2 25 4 828.83502 3312.31826 3.03 21.32 1564 1564 MS2 52/228 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 51 3.77 0.00 0 4 100 2 883.37701 1765.74675 6.76 33.06 3506 3506 MS2 25/38 Linfeng_20120125_PCAF_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.77 0.00 0 13 25 2 997.49182 1993.97637 -0.17 43.37 4866 4866 MS2 20/30 Linfeng_122411_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 3.77 0.00 0 14 25 3 589.25153 1765.74002 2.95 27.67 1977 1977 MS2 34/76 Linfeng_122411_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 436 3.77 0.00 0 35 100 2 738.40222 1475.79717 8.03 28.63 2873 2873 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 51 3.77 0.00 0 3 100 2 883.37775 1765.74822 7.59 30.20 2852 2852 MS2 27/38 Linfeng_20120125_PCAF_6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.77 0.00 1 17 25 3 615.65192 1844.94120 -2.69 26.93 3018 3018 MS2 30/60 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 3.77 0.00 2 8 25 4 546.78558 2184.12050 -2.34 41.64 4904 4904 MS2 44/108 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 23 25 2 829.40155 1657.79582 1.74 29.14 2860 2860 MS2 20/32 Linfeng_122411_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 228 3.76 0.00 0 0 25 2 829.39862 1657.78996 -1.80 30.26 3449 3449 MS2 20/32 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 3.76 0.00 0 21 20 2 829.39832 1657.78935 -2.16 28.32 2804 2804 MS2 22/32 Linfeng_122411_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 268 3.76 0.00 0 50 100 2 829.40576 1657.80425 6.82 32.24 3028 3028 MS2 21/32 Linfeng_20120125_PCAF_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 3.76 0.00 0 9 25 2 997.49548 1993.98369 3.50 43.64 4534 4534 MS2 21/30 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 3.76 0.00 0 2 100 2 883.37744 1765.74761 7.24 29.92 2800 2800 MS2 30/38 Linfeng_20120125_PCAF_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 3.76 0.00 0 12 25 2 1192.48413 2383.96099 3.78 19.96 1504 1504 MS2 22/60 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.75 0.00 0 2 100 2 738.40137 1475.79546 6.87 25.70 2194 2194 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.75 0.00 0 3 100 2 738.40100 1475.79473 6.37 27.73 2234 2234 MS2 20/22 Linfeng_20120125_PCAF_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 267 3.74 0.00 0 22 100 2 829.40674 1657.80620 8.00 32.31 2887 2887 MS2 21/32 Linfeng_20120125_PCAF_7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 232 3.74 0.00 0 1 17 2 829.39746 1657.78765 -3.19 30.22 3191 3191 MS2 21/32 Linfeng_091311_rIgG_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 275 3.74 0.00 0 3 25 2 829.40259 1657.79790 2.99 29.10 2437 2437 MS2 22/32 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 297 3.74 0.00 0 62 25 2 858.92786 1716.84844 -1.60 31.16 3581 3581 MS2 20/28 Linfeng_091311_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.73 0.00 1 5 10 3 533.94800 1599.82944 -2.69 34.36 4005 4005 MS2 31/52 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.73 0.00 0 55 100 2 738.40118 1475.79509 6.62 29.70 2582 2582 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 3.73 0.00 0 0 25 2 883.37390 1765.74053 3.23 27.62 1973 1973 MS2 22/38 Linfeng_122411_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.73 0.00 0 4 11 2 679.34943 1357.69158 -3.15 33.56 3931 3931 MS2 20/22 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.72 0.00 0 57 100 2 738.40063 1475.79399 5.88 29.68 3021 3021 MS2 20/22 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 322 3.72 0.00 0 6 6 3 572.95325 1716.84519 -3.49 30.98 3591 3591 MS2 33/56 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 3.71 0.00 2 10 100 4 626.07312 2501.27065 7.49 38.91 4346 4346 MS2 39/126 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 3.71 0.00 0 0 100 2 883.37689 1765.74651 6.62 30.74 2784 2784 MS2 28/38 Linfeng_20120125_PCAF_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 3.71 0.00 0 11 100 3 572.95898 1716.86240 6.53 33.93 3489 3489 MS2 28/56 Linfeng_20120125_PCAF_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 13 3.71 0.00 0 11 100 3 795.32660 2383.96524 5.57 16.80 1106 1106 MS2 31/120 Linfeng_20120125_PCAF_4.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.71 0.00 1 16 25 3 783.74396 2349.21732 -0.50 52.63 6268 6268 MS2 33/80 Linfeng_091311_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 219 3.70 0.00 0 3 25 2 829.39838 1657.78948 -2.09 30.34 3443 3443 MS2 22/32 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 57 3.70 0.00 0 0 100 2 883.37671 1765.74614 6.41 29.47 3057 3057 MS2 26/38 Linfeng_20120125_PCAF_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 231 3.70 0.00 0 8 14 2 829.39832 1657.78935 -2.16 28.60 2586 2586 MS2 24/32 Linfeng_122411_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 230 3.70 0.00 0 1 25 2 829.39825 1657.78923 -2.24 30.06 3481 3481 MS2 21/32 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.70 0.00 0 40 100 2 738.40137 1475.79546 6.87 28.12 2210 2210 MS2 20/22 Linfeng_20120125_PCAF_7.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 102 3.70 0.00 0 2 25 3 855.72479 2565.15982 -2.76 27.19 2778 2778 MS2 35/100 Linfeng_091311_rIgG_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.69 0.00 1 2 19 3 533.94800 1599.82944 -2.69 34.55 3962 3962 MS2 30/52 Linfeng_091311_rIgG_5.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.69 0.00 1 27 100 3 615.65759 1844.95823 6.54 30.86 2782 2782 MS2 28/60 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.69 0.00 0 38 100 2 738.40179 1475.79631 7.45 27.90 2702 2702 MS2 20/22 Linfeng_20120125_PCAF_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 3.69 0.00 0 4 25 2 829.39838 1657.78948 -2.09 30.36 3447 3447 MS2 22/32 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 3.69 0.00 1 6 85 3 533.95270 1599.84354 6.12 41.31 6036 6036 MS2 30/52 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 440 3.69 0.00 0 3 11 2 738.40253 1475.79778 8.44 26.70 2016 2016 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 59 3.68 0.00 0 0 100 2 883.37830 1765.74932 8.21 32.31 2894 2894 MS2 25/38 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.67 0.00 0 49 100 2 738.40167 1475.79607 7.28 29.54 2744 2744 MS2 20/22 Linfeng_20120125_PCAF_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.67 0.00 1 14 100 3 762.71863 2286.14133 7.18 39.12 4391 4391 MS2 31/76 Linfeng_20120125_PCAF_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.67 0.00 0 3 100 3 1104.77979 3312.32480 5.00 21.88 1670 1670 MS2 33/152 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 389 3.66 0.00 0 2 6 2 738.39984 1475.79241 4.80 26.71 2410 2410 MS2 20/22 Linfeng_20120125_PCAF_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 241 3.66 0.00 0 1 100 2 829.40393 1657.80058 4.61 32.81 2993 2993 MS2 20/32 Linfeng_20120125_PCAF_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.66 0.00 1 53 100 3 533.95074 1599.83768 2.46 43.92 5810 5810 MS2 29/52 Linfeng_20120125_PCAF_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 239 3.66 0.00 0 0 25 2 829.39880 1657.79033 -1.57 30.11 3442 3442 MS2 22/32 Linfeng_091311_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 3.66 0.00 0 13 25 3 572.95288 1716.84409 -4.13 31.03 3538 3538 MS2 32/56 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 453 3.65 0.00 1 5 100 3 533.95294 1599.84427 6.58 42.30 6257 6257 MS2 29/52 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 251 3.64 0.00 0 19 25 3 553.26770 1657.78855 -2.65 30.16 3495 3495 MS2 33/64 Linfeng_091311_rIgG_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.64 0.00 1 13 25 3 508.60092 1523.78821 -0.32 30.17 2996 2996 MS2 25/44 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 292 3.64 0.00 0 11 25 2 858.92737 1716.84746 -2.17 30.72 3569 3569 MS2 23/28 Linfeng_091311_rIgG_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.64 0.00 2 5 1 4 626.06921 2501.25503 1.25 29.80 2776 2776 MS2 44/126 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 137 3.64 0.00 1 8 25 2 844.49097 1687.97466 2.65 31.63 2984 2984 MS2 23/32 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.64 0.00 0 33 100 2 738.40198 1475.79668 7.70 28.58 2863 2863 MS2 19/22 Linfeng_20120125_PCAF_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 257 3.63 0.00 0 6 68 2 829.39954 1657.79180 -0.69 32.41 3802 3802 MS2 21/32 Linfeng_20120125_PCAF_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.63 0.00 1 12 25 2 800.41888 1599.83049 -2.04 34.57 4009 4009 MS2 22/26 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.63 0.00 1 5 100 3 762.71857 2286.14115 7.10 39.18 4406 4406 MS2 30/76 Linfeng_20120125_PCAF_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 3.62 0.00 0 40 100 2 829.40692 1657.80657 8.22 32.34 3066 3066 MS2 19/32 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 3.62 0.00 1 4 25 3 647.99951 1941.98398 -1.92 42.05 4955 4955 MS2 30/64 Linfeng_091311_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 3.62 0.00 1 15 25 2 800.41846 1599.82964 -2.57 34.40 4010 4010 MS2 22/26 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 3.62 0.00 2 3 25 4 546.78503 2184.11831 -3.34 41.33 4955 4955 MS2 48/108 Linfeng_091311_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 48 3.62 0.00 0 3 100 2 883.37677 1765.74626 6.48 29.92 3165 3165 MS2 25/38 Linfeng_20120125_PCAF_5.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.61 0.00 2 19 25 4 546.78802 2184.13027 2.13 41.15 3969 3969 MS2 30/108 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 3.61 0.00 2 14 18 3 728.71204 2184.12156 -1.86 41.38 4703 4703 MS2 29/72 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 3.61 0.00 0 3 34 2 679.35516 1357.70305 5.30 37.54 5076 5076 MS2 19/22 Linfeng_20120125_PCAF_5.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 3.61 0.00 2 74 25 3 728.71240 2184.12265 -1.35 41.72 4903 4903 MS2 30/72 Linfeng_091311_rIgG_7.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 3.61 0.00 1 0 100 2 1143.57471 2286.14214 7.54 39.12 4849 4849 MS2 22/38 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.61 0.00 0 46 100 2 738.40161 1475.79595 7.20 28.52 2278 2278 MS2 20/22 Linfeng_20120125_PCAF_7.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 121 3.61 0.00 0 4 25 3 855.73016 2565.17594 3.52 25.93 2258 2258 MS2 34/100 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.60 0.00 1 15 25 2 800.41864 1599.83000 -2.34 34.43 4006 4006 MS2 22/26 Linfeng_091311_rIgG_4.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.60 0.00 1 5 5 3 508.60098 1523.78839 -0.20 29.82 2778 2778 MS2 25/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.60 0.00 0 3 100 2 738.40222 1475.79717 8.03 27.71 2191 2191 MS2 20/22 Linfeng_20120125_PCAF_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 300 3.60 0.00 0 3 25 2 858.92755 1716.84783 -1.95 30.75 3527 3527 MS2 23/28 Linfeng_091311_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 3.60 0.00 1 11 100 2 922.98260 1844.95793 6.39 31.10 2824 2824 MS2 19/30 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 3.60 0.00 1 17 25 3 783.74677 2349.22574 3.08 51.47 5904 5904 MS2 32/80 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 3.60 0.00 0 5 12 2 858.92639 1716.84551 -3.31 30.98 3592 3592 MS2 23/28 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 316 3.59 0.00 0 9 25 3 572.95319 1716.84500 -3.60 30.94 3522 3522 MS2 30/56 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.59 0.00 0 3 100 2 738.40155 1475.79582 7.12 27.69 2141 2141 MS2 20/22 Linfeng_20120125_PCAF_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 3.59 0.00 1 6 100 2 922.98212 1844.95696 5.86 30.71 3270 3270 MS2 22/30 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.59 0.00 0 24 25 3 572.95380 1716.84684 -2.53 30.92 3485 3485 MS2 31/56 Linfeng_091311_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.58 0.00 0 14 100 2 883.37720 1765.74712 6.97 28.83 2276 2276 MS2 24/38 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.58 0.00 0 4 6 2 738.40179 1475.79631 7.45 26.65 2220 2220 MS2 20/22 Linfeng_20120125_PCAF_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.58 0.00 0 24 25 2 997.49457 1993.98186 2.58 43.64 4528 4528 MS2 20/30 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.58 0.00 0 46 100 2 738.40088 1475.79448 6.21 30.13 3131 3131 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 3.58 0.00 1 10 100 3 533.95325 1599.84519 7.15 42.71 6144 6144 MS2 29/52 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.57 0.00 0 5 19 2 679.34961 1357.69194 -2.88 33.23 3860 3860 MS2 20/22 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 3.57 0.00 0 2 14 2 858.92700 1716.84673 -2.59 30.97 3493 3493 MS2 21/28 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 227 3.57 0.00 0 1 25 2 829.39777 1657.78826 -2.83 30.25 3568 3568 MS2 21/32 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.57 0.00 0 49 100 2 738.40106 1475.79485 6.45 29.61 2739 2739 MS2 20/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.56 0.00 1 15 25 4 588.06195 2349.22597 3.18 51.48 5598 5598 MS2 39/120 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.56 0.00 0 1 21 2 858.93091 1716.85454 1.96 29.69 2730 2730 MS2 22/28 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 231 3.56 0.00 0 4 25 2 829.39862 1657.78996 -1.80 30.02 3437 3437 MS2 20/32 Linfeng_091311_rIgG_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.56 0.00 0 30 25 2 679.35663 1357.70598 7.46 31.98 2905 2905 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 3.55 0.00 0 5 25 2 858.92657 1716.84587 -3.09 30.99 3528 3528 MS2 21/28 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.55 0.00 0 32 100 2 738.40167 1475.79607 7.28 30.64 2946 2946 MS2 19/22 Linfeng_20120125_PCAF_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 116 3.55 0.00 0 19 25 3 855.72797 2565.16935 0.95 25.82 2461 2461 MS2 30/100 Linfeng_122411_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 3.55 0.00 0 100 100 2 829.40594 1657.80461 7.04 32.15 3235 3235 MS2 22/32 Linfeng_20120125_PCAF_6.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 156 3.55 0.00 1 21 25 3 563.32990 1687.97513 2.93 31.47 2744 2744 MS2 29/64 Linfeng_122411_rIgG_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.54 0.00 0 2 25 2 858.93073 1716.85417 1.74 29.97 2968 2968 MS2 22/28 Linfeng_122411_rIgG_6.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 132 3.54 0.00 0 0 100 3 855.73395 2565.18729 7.95 28.82 2610 2610 MS2 29/100 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.54 0.00 0 20 100 2 883.37573 1765.74419 5.31 28.89 2623 2623 MS2 24/38 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 3.54 0.00 1 18 100 3 762.71851 2286.14096 7.02 39.85 5021 5021 MS2 32/76 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 3.54 0.00 0 7 100 2 883.37653 1765.74578 6.21 33.62 3974 3974 MS2 27/38 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 3.53 0.00 0 7 100 2 883.37573 1765.74419 5.31 32.59 3175 3175 MS2 25/38 Linfeng_20120125_PCAF_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.53 0.00 0 4 3 2 679.34967 1357.69206 -2.79 33.38 3871 3871 MS2 20/22 Linfeng_091311_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 288 3.53 0.00 0 5 10 2 858.92804 1716.84880 -1.39 0.03 5 5 MS2 22/28 Linfeng_122411_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.53 0.00 0 13 100 2 883.37646 1765.74565 6.14 31.58 3479 3479 MS2 28/38 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 262 3.52 0.00 0 55 100 2 829.40686 1657.80644 8.14 32.28 3053 3053 MS2 19/32 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.52 0.00 0 6 13 2 679.34943 1357.69158 -3.15 33.50 3871 3871 MS2 20/22 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 264 3.52 0.00 0 0 25 2 829.40393 1657.80058 4.61 29.08 2077 2077 MS2 21/32 Linfeng_122411_rIgG_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.52 0.00 0 5 46 2 997.49506 1993.98284 3.07 55.25 7298 7298 MS2 21/30 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 3.52 0.00 0 8 25 2 858.92859 1716.84990 -0.75 29.39 2949 2949 MS2 23/28 Linfeng_122411_rIgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 3.51 0.00 0 1 100 3 855.73346 2565.18583 7.38 29.21 2499 2499 MS2 32/100 Linfeng_20120125_PCAF_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 3.51 0.00 0 36 100 2 858.93658 1716.86589 8.57 34.69 3581 3581 MS2 19/28 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.51 0.00 0 3 9 2 679.34955 1357.69182 -2.97 33.56 3861 3861 MS2 20/22 Linfeng_091311_rIgG_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.51 0.00 1 14 100 3 615.65808 1844.95969 7.34 30.97 2632 2632 MS2 29/60 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.51 0.00 0 52 100 2 738.40131 1475.79534 6.79 28.34 2248 2248 MS2 19/22 Linfeng_20120125_PCAF_7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 260 3.51 0.00 0 5 25 2 829.40155 1657.79582 1.74 28.55 2611 2611 MS2 22/32 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 3.51 0.00 1 8 25 4 733.88684 2932.52553 3.11 39.43 4164 4164 MS2 42/138 Linfeng_122411_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 267 3.51 0.00 0 23 25 3 553.26825 1657.79020 -1.66 30.14 3446 3446 MS2 33/64 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 214 3.51 0.00 0 15 25 2 829.39661 1657.78594 -4.23 30.42 3517 3517 MS2 21/32 Linfeng_091311_rIgG_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 3.51 0.00 0 4 3 2 679.34888 1357.69048 -3.96 33.28 3910 3910 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.51 0.00 0 11 100 2 738.40149 1475.79570 7.03 25.74 2121 2121 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 420 3.51 0.00 0 23 100 2 738.40149 1475.79570 7.03 25.71 1781 1781 MS2 18/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 214 3.50 0.00 0 9 25 2 829.39655 1657.78581 -4.30 30.28 3401 3401 MS2 20/32 Linfeng_091311_rIgG_5.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 3.50 0.00 1 35 100 3 615.65692 1844.95621 5.45 30.66 3258 3258 MS2 29/60 Linfeng_20120125_PCAF_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.50 0.00 1 3 13 3 508.60129 1523.78931 0.40 29.80 2744 2744 MS2 24/44 Linfeng_122411_rIgG_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.50 0.00 2 13 100 3 834.42896 2501.27231 8.16 39.89 4858 4858 MS2 31/84 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 307 3.49 0.00 0 23 25 2 639.35968 1277.71208 1.61 38.39 3848 3848 MS2 18/20 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 3.49 0.00 0 14 100 3 855.73346 2565.18583 7.38 29.84 3058 3058 MS2 28/100 Linfeng_20120125_PCAF_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 275 3.49 0.00 0 4 25 2 829.40265 1657.79802 3.06 26.00 2107 2107 MS2 21/32 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.48 0.00 0 3 14 2 679.34961 1357.69194 -2.88 33.44 3993 3993 MS2 20/22 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 3.48 0.00 0 8 100 3 855.73340 2565.18564 7.30 28.21 2336 2336 MS2 30/100 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.48 0.00 0 3 14 2 738.40198 1475.79668 7.70 26.75 2267 2267 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.48 0.00 0 4 19 2 738.40240 1475.79753 8.27 26.68 2003 2003 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.48 0.00 0 4 8 2 738.40216 1475.79704 7.94 26.72 1917 1917 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 132 3.47 0.00 0 32 100 3 855.73401 2565.18747 8.02 27.97 2718 2718 MS2 31/100 Linfeng_20120125_PCAF_8.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 3.47 0.00 0 11 25 2 738.37842 1475.74956 0.42 35.88 3719 3719 MS2 20/22 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.47 0.00 0 1 25 2 858.92706 1716.84685 -2.52 31.10 3547 3547 MS2 21/28 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 54 3.47 0.00 0 7 100 2 883.37659 1765.74590 6.28 35.67 4475 4475 MS2 25/38 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.46 0.00 0 8 25 2 858.93115 1716.85503 2.24 29.69 2761 2761 MS2 22/28 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 3.46 0.00 0 31 25 2 829.40118 1657.79509 1.30 27.66 2409 2409 MS2 20/32 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 3.46 0.00 1 56 100 2 800.42267 1599.83806 2.69 43.71 6388 6388 MS2 21/26 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.46 0.00 0 4 6 2 738.40149 1475.79570 7.03 26.71 2034 2034 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.46 0.00 0 23 25 2 883.37360 1765.73992 2.89 27.48 2126 2126 MS2 21/38 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 461 3.45 0.00 0 20 100 2 679.35693 1357.70659 7.91 38.53 4262 4262 MS2 19/22 Linfeng_20120125_PCAF_3.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.45 0.00 1 3 25 3 647.99976 1941.98471 -1.54 41.81 4953 4953 MS2 27/64 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 3.45 0.00 1 0 100 2 800.42426 1599.84123 4.68 43.90 5712 5712 MS2 22/26 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 349 3.44 0.00 0 2 78 2 738.39935 1475.79143 4.14 25.73 2183 2183 MS2 18/22 Linfeng_20120125_PCAF_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 254 3.44 0.00 0 6 64 2 829.39978 1657.79228 -0.40 32.37 3789 3789 MS2 20/32 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.44 0.00 0 54 100 2 738.40057 1475.79387 5.79 29.60 3002 3002 MS2 20/22 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 3.44 0.00 0 1 25 2 858.92603 1716.84477 -3.73 30.83 3646 3646 MS2 20/28 Linfeng_091311_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 293 3.44 0.00 2 9 20 4 626.06592 2501.24184 -4.03 30.62 3244 3244 MS2 40/126 Linfeng_091311_rIgG_1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 160 3.44 0.00 1 17 15 3 563.32813 1687.96982 -0.22 3.37 316 316 MS2 30/64 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.44 0.00 0 4 9 2 738.40198 1475.79668 7.70 26.61 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 469 3.43 0.00 0 16 89 2 679.35681 1357.70635 7.73 38.47 4768 4768 MS2 20/22 Linfeng_20120125_PCAF_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.43 0.00 1 13 100 3 762.71869 2286.14151 7.26 39.05 4377 4377 MS2 29/76 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 282 3.42 0.00 0 29 25 2 639.36078 1277.71428 3.33 38.29 3974 3974 MS2 18/20 Linfeng_122411_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 3.42 0.00 0 4 9 2 679.35614 1357.70500 6.74 38.25 5093 5093 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 3.42 0.00 0 0 100 2 883.37610 1765.74492 5.72 32.97 3270 3270 MS2 25/38 Linfeng_20120125_PCAF_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 3.42 0.00 0 19 25 2 651.86121 1302.71514 -0.04 43.58 4893 4893 MS2 19/22 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.42 0.00 0 17 100 2 858.93475 1716.86223 6.44 34.52 4196 4196 MS2 20/28 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 3.42 0.00 1 0 100 2 800.42194 1599.83660 1.78 43.63 5929 5929 MS2 21/26 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.42 0.00 0 6 100 2 883.37585 1765.74443 5.45 32.61 3729 3729 MS2 27/38 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.42 0.00 0 5 100 2 738.40100 1475.79473 6.37 27.78 2435 2435 MS2 20/22 Linfeng_20120125_PCAF_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 3.41 0.00 0 5 100 3 855.73346 2565.18583 7.38 29.23 2507 2507 MS2 32/100 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 3.41 0.00 2 12 25 4 546.78815 2184.13076 2.36 40.88 4344 4344 MS2 45/108 Linfeng_122411_rIgG_6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.40 0.00 1 8 100 2 922.98407 1844.96086 7.97 31.04 2646 2646 MS2 20/30 Linfeng_20120125_PCAF_3.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.40 0.00 1 6 25 3 648.00244 1941.99277 2.61 41.06 4366 4366 MS2 26/64 Linfeng_122411_rIgG_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 3.40 0.00 0 18 4 2 738.37738 1475.74748 -0.99 35.64 3809 3809 MS2 20/22 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 3.40 0.00 0 1 25 2 858.93115 1716.85503 2.24 29.62 2866 2866 MS2 23/28 Linfeng_122411_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.39 0.00 1 30 100 3 615.65814 1844.95987 7.44 30.81 2603 2603 MS2 26/60 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.39 0.00 1 17 25 3 783.74500 2349.22043 0.82 52.84 6287 6287 MS2 36/80 Linfeng_091311_rIgG_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 238 3.39 0.00 1 3 22 2 670.83685 1340.66643 -2.13 18.95 1898 1898 MS2 19/22 Linfeng_091311_rIgG_4.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 3.39 0.00 1 7 23 3 647.99939 1941.98362 -2.11 41.70 5002 5002 MS2 29/64 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 3.39 0.00 0 5 25 2 679.35254 1357.69780 1.44 32.28 3068 3068 MS2 20/22 Linfeng_122411_rIgG_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.39 0.00 0 4 25 3 461.90234 1383.69248 1.53 34.78 3015 3015 MS2 25/44 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.39 0.00 0 10 25 3 572.95593 1716.85324 1.20 29.29 2618 2618 MS2 28/56 Linfeng_122411_rIgG_8.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 3.39 0.00 0 20 2 2 738.37372 1475.74016 -5.95 36.74 4361 4361 MS2 20/22 Linfeng_091311_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 3.39 0.00 1 10 100 3 533.95197 1599.84134 4.75 43.64 5427 5427 MS2 25/52 Linfeng_20120125_PCAF_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 280 3.38 0.00 0 25 100 2 829.40668 1657.80608 7.92 32.30 2884 2884 MS2 20/32 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.38 0.00 0 71 100 2 738.40155 1475.79582 7.12 30.39 2890 2890 MS2 19/22 Linfeng_20120125_PCAF_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 3.38 0.00 0 10 25 2 997.49518 1993.98308 3.19 43.47 4624 4624 MS2 22/30 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 3.38 0.00 0 20 25 3 572.95355 1716.84610 -2.96 30.72 3524 3524 MS2 29/56 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 3.38 0.00 0 24 25 3 422.55148 1265.63990 2.08 26.84 2355 2355 MS2 24/40 Linfeng_122411_rIgG_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.38 0.00 1 7 100 3 762.71747 2286.13785 5.66 39.24 4376 4376 MS2 29/76 Linfeng_20120125_PCAF_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 3.37 0.00 0 24 25 2 679.35248 1357.69768 1.35 32.25 3209 3209 MS2 20/22 Linfeng_122411_rIgG_4.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 3.37 0.00 2 8 100 4 626.07251 2501.26821 6.52 38.94 4641 4641 MS2 38/126 Linfeng_20120125_PCAF_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.37 0.00 0 38 100 2 858.93433 1716.86138 5.94 34.65 4228 4228 MS2 22/28 Linfeng_20120125_PCAF_1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.37 0.00 1 19 100 3 762.71930 2286.14334 8.06 39.22 4618 4618 MS2 29/76 Linfeng_20120125_PCAF_9.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 3.37 0.00 1 15 100 3 762.71838 2286.14060 6.86 39.15 4390 4390 MS2 29/76 Linfeng_20120125_PCAF_7.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.37 0.00 0 12 3 2 738.37482 1475.74236 -4.46 36.78 4310 4310 MS2 20/22 Linfeng_091311_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.37 0.00 0 40 100 2 858.93524 1716.86321 7.00 34.74 3517 3517 MS2 20/28 Linfeng_20120125_PCAF_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.36 0.00 0 15 6 2 738.37787 1475.74846 -0.33 35.62 3494 3494 MS2 20/22 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.36 0.00 0 11 3 2 738.37891 1475.75054 1.08 35.69 3529 3529 MS2 20/22 Linfeng_122411_rIgG_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 3.35 0.00 1 3 100 2 922.98401 1844.96074 7.91 31.07 2849 2849 MS2 22/30 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 308 3.35 0.00 0 14 25 2 639.36005 1277.71282 2.18 39.42 4001 4001 MS2 18/20 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 254 3.35 0.00 0 42 100 2 829.40546 1657.80364 6.45 33.59 3413 3413 MS2 19/32 Linfeng_20120125_PCAF_4.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 3.35 0.00 1 13 25 3 648.00256 1941.99314 2.79 40.99 4064 4064 MS2 26/64 Linfeng_122411_rIgG_10.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 3.34 0.00 0 11 100 2 829.40582 1657.80437 6.89 33.29 3500 3500 MS2 20/32 Linfeng_20120125_PCAF_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 3.34 0.00 0 24 100 2 883.37726 1765.74724 7.04 28.69 2416 2416 MS2 22/38 Linfeng_20120125_PCAF_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 125 3.33 0.00 0 11 100 3 855.73224 2565.18216 5.95 28.29 2188 2188 MS2 28/100 Linfeng_20120125_PCAF_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.33 0.00 0 2 25 2 858.93097 1716.85466 2.03 28.44 2430 2430 MS2 22/28 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.33 0.00 1 6 25 3 647.99963 1941.98435 -1.73 41.68 4742 4742 MS2 28/64 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 3.33 0.00 1 37 100 2 800.42621 1599.84514 7.12 43.01 5589 5589 MS2 22/26 Linfeng_20120125_PCAF_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.33 0.00 0 39 25 2 651.85962 1302.71196 -2.48 44.82 5454 5454 MS2 19/22 Linfeng_091311_rIgG_10.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 3.33 0.00 0 10 16 2 738.37885 1475.75041 1.00 35.70 3647 3647 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 3.33 0.00 0 0 100 2 738.40051 1475.79375 5.71 25.61 1927 1927 MS2 19/22 Linfeng_20120125_PCAF_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 3.33 0.00 0 32 100 2 679.35522 1357.70317 5.39 38.18 5232 5232 MS2 20/22 Linfeng_20120125_PCAF_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.33 0.00 1 10 5 2 697.36945 1393.73161 -0.44 3.86 423 423 MS2 18/22 Linfeng_122411_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 282 3.33 0.00 0 16 25 2 639.36029 1277.71330 2.56 38.30 3457 3457 MS2 18/20 Linfeng_122411_rIgG_7.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 3.33 0.00 0 20 25 2 738.37909 1475.75090 1.33 35.69 3386 3386 MS2 20/22 Linfeng_122411_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.32 0.00 2 7 100 4 626.07343 2501.27187 7.98 39.01 4367 4367 MS2 41/126 Linfeng_20120125_PCAF_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.32 0.00 0 28 25 3 572.95593 1716.85324 1.20 29.91 2960 2960 MS2 28/56 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 3.31 0.00 0 10 25 2 651.86359 1302.71990 3.61 43.59 4521 4521 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.31 0.00 0 4 9 2 692.34656 1383.68584 -3.27 37.01 4321 4321 MS2 19/22 Linfeng_091311_rIgG_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.31 0.00 0 22 9 2 738.37610 1475.74492 -2.72 36.93 4271 4271 MS2 20/22 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 259 3.30 0.00 0 13 25 2 829.40125 1657.79521 1.37 29.24 2611 2611 MS2 20/32 Linfeng_122411_rIgG_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 3.30 0.00 0 16 25 3 855.72980 2565.17484 3.09 25.93 2376 2376 MS2 26/100 Linfeng_122411_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.30 0.00 1 14 60 2 800.42517 1599.84307 5.82 41.31 6035 6035 MS2 21/26 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.30 0.00 0 61 100 2 738.40021 1475.79314 5.30 30.32 3176 3176 MS2 20/22 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 3.30 0.00 0 3 13 2 692.35425 1383.70122 7.85 46.11 6341 6341 MS2 18/22 Linfeng_20120125_PCAF_4.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 3.29 0.00 2 21 100 3 834.42871 2501.27158 7.86 38.72 4305 4305 MS2 30/84 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 50 3.29 0.00 0 5 100 2 883.37695 1765.74663 6.69 28.43 2819 2819 MS2 22/38 Linfeng_20120125_PCAF_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.29 0.00 0 5 7 2 639.35858 1277.70989 -0.11 38.42 4193 4193 MS2 18/20 Linfeng_122411_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 3.29 0.00 0 32 25 2 679.34912 1357.69097 -3.60 33.48 3822 3822 MS2 20/22 Linfeng_091311_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 3.29 0.00 0 4 2 2 858.93048 1716.85369 1.46 3.10 276 276 MS2 22/28 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 3.29 0.00 1 20 25 3 508.60205 1523.79160 1.90 29.83 2893 2893 MS2 23/44 Linfeng_122411_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 3.29 0.00 1 28 82 2 800.42633 1599.84538 7.27 42.37 6276 6276 MS2 21/26 Linfeng_20120125_PCAF_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 255 3.29 0.00 1 2 2 2 670.83582 1340.66435 -3.68 1.84 232 232 MS2 19/22 Linfeng_091311_rIgG_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.29 0.00 0 2 12 2 858.92706 1716.84685 -2.52 31.00 3547 3547 MS2 21/28 Linfeng_091311_rIgG_6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 3.29 0.00 1 8 25 3 615.65179 1844.94083 -2.88 27.26 3026 3026 MS2 27/60 Linfeng_091311_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 314 3.29 0.00 0 8 25 3 461.90173 1383.69065 0.21 35.93 3560 3560 MS2 24/44 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 3.28 0.00 0 4 25 2 858.93134 1716.85539 2.45 30.05 2421 2421 MS2 18/28 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 438 3.28 0.00 0 40 100 2 738.40027 1475.79326 5.38 29.89 2610 2610 MS2 18/22 Linfeng_20120125_PCAF_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 3.28 0.00 0 30 25 3 572.95630 1716.85434 1.84 28.60 2369 2369 MS2 27/56 Linfeng_122411_rIgG_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 264 3.28 0.00 0 1 8 2 639.36115 1277.71501 3.90 48.57 6933 6933 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.28 0.00 0 15 17 2 639.35724 1277.70720 -2.22 39.51 4722 4722 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 306 3.28 0.00 0 29 25 2 639.35999 1277.71269 2.08 38.35 3867 3867 MS2 18/20 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 3.28 0.00 1 19 100 3 533.95355 1599.84610 7.72 43.03 5276 5276 MS2 25/52 Linfeng_20120125_PCAF_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.27 0.00 2 2 25 4 626.06976 2501.25722 2.12 29.76 2941 2941 MS2 42/126 Linfeng_122411_rIgG_6.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 82 3.27 0.00 1 10 25 3 693.97607 2079.91367 -0.55 2.68 238 238 MS2 34/108 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 3.27 0.00 0 4 7 2 858.92670 1716.84612 -2.95 30.80 3268 3268 MS2 22/28 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 3.27 0.00 0 6 25 2 679.35260 1357.69792 1.53 32.29 3101 3101 MS2 20/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 295 3.27 0.00 0 20 25 2 639.35999 1277.71269 2.08 40.55 4144 4144 MS2 18/20 Linfeng_122411_rIgG_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 3.27 0.00 0 23 15 2 738.37927 1475.75127 1.58 34.35 2962 2962 MS2 19/22 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 51 3.27 0.00 0 13 100 2 883.37653 1765.74578 6.21 34.50 4191 4191 MS2 24/38 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.27 0.00 0 5 1 2 692.34650 1383.68572 -3.36 36.85 4088 4088 MS2 19/22 Linfeng_091311_rIgG_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 3.27 0.00 1 17 100 2 800.42633 1599.84538 7.27 42.90 5094 5094 MS2 22/26 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 3.26 0.00 1 7 100 3 533.95178 1599.84079 4.40 43.78 5682 5682 MS2 22/52 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 188 3.26 0.00 1 28 16 3 563.32611 1687.96378 -3.80 32.80 3781 3781 MS2 29/64 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 309 3.26 0.00 0 3 8 2 692.35419 1383.70110 7.76 45.93 6297 6297 MS2 18/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 3.26 0.00 0 39 25 2 651.86285 1302.71843 2.49 43.48 4625 4625 MS2 19/22 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 310 3.25 0.00 0 13 25 2 997.49017 1993.97307 -1.83 44.66 5279 5279 MS2 22/30 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 3.25 0.00 0 31 100 2 858.93561 1716.86394 7.43 34.66 3576 3576 MS2 19/28 Linfeng_20120125_PCAF_9.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 447 3.25 0.00 1 15 25 3 533.94946 1599.83384 0.05 33.96 3481 3481 MS2 22/52 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 155 3.25 0.00 1 21 25 3 563.32861 1687.97129 0.65 31.37 2824 2824 MS2 28/64 Linfeng_122411_rIgG_10.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 340 3.25 0.00 1 1 25 2 819.93530 1638.86333 2.09 37.54 3928 3928 MS2 20/26 Linfeng_122411_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 465 3.25 0.00 0 47 100 2 679.35620 1357.70513 6.83 39.84 5069 5069 MS2 18/22 Linfeng_20120125_PCAF_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 3.24 0.00 1 1 25 3 648.00262 1941.99332 2.89 40.86 4295 4295 MS2 29/64 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 3.24 0.00 0 14 100 2 883.37671 1765.74614 6.41 31.21 3048 3048 MS2 27/38 Linfeng_20120125_PCAF_6.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 335 3.24 0.00 1 8 100 3 762.71881 2286.14188 7.42 38.97 4813 4813 MS2 27/76 Linfeng_20120125_PCAF_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.24 0.00 0 3 22 2 692.35358 1383.69988 6.88 46.15 6977 6977 MS2 19/22 Linfeng_20120125_PCAF_1.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 3.24 0.00 1 3 12 3 648.00195 1941.99131 1.85 41.04 4205 4205 MS2 31/64 Linfeng_122411_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 3.24 0.00 1 11 4 2 697.36914 1393.73100 -0.88 3.68 374 374 MS2 18/22 Linfeng_122411_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 3.24 0.00 0 0 100 2 829.40546 1657.80364 6.45 33.27 3226 3226 MS2 20/32 Linfeng_20120125_PCAF_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 3.23 0.00 2 68 100 3 834.42834 2501.27048 7.42 39.38 4653 4653 MS2 33/84 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 301 3.23 0.00 0 31 25 2 997.49017 1993.97307 -1.83 44.26 5259 5259 MS2 20/30 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 456 3.23 0.00 0 5 9 2 651.86267 1302.71807 2.21 43.76 4142 4142 MS2 19/22 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 3.23 0.00 1 3 15 3 648.00238 1941.99259 2.51 41.00 3793 3793 MS2 29/64 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 334 3.23 0.00 0 3 25 2 692.34967 1383.69206 1.23 34.59 2991 2991 MS2 19/22 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 3.22 0.00 1 0 100 2 800.42401 1599.84075 4.37 43.86 5701 5701 MS2 22/26 Linfeng_20120125_PCAF_9.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 70 3.22 0.00 1 0 25 3 693.97369 2079.90653 -3.99 12.80 1072 1072 MS2 33/108 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 336 3.21 0.00 1 40 100 3 762.71997 2286.14536 8.94 39.11 4591 4591 MS2 28/76 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 328 3.21 0.00 0 3 15 2 692.34943 1383.69158 0.88 35.89 3411 3411 MS2 19/22 Linfeng_122411_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 3.21 0.00 0 5 2 2 651.86237 1302.71745 1.74 43.78 4551 4551 MS2 19/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 3.21 0.00 0 4 25 2 651.86322 1302.71916 3.05 43.70 4413 4413 MS2 19/22 Linfeng_122411_rIgG_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 314 3.21 0.00 0 4 25 2 692.35059 1383.69390 2.55 35.95 3317 3317 MS2 19/22 Linfeng_122411_rIgG_9.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 3.21 0.00 1 47 100 2 800.42255 1599.83782 2.54 44.00 5830 5830 MS2 22/26 Linfeng_20120125_PCAF_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.21 0.00 0 8 100 2 883.37598 1765.74468 5.58 34.67 4232 4232 MS2 23/38 Linfeng_20120125_PCAF_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 248 3.20 0.00 0 27 25 3 553.26776 1657.78873 -2.54 30.40 3452 3452 MS2 34/64 Linfeng_091311_rIgG_7.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.20 0.00 1 11 25 3 762.71259 2286.12320 -0.75 31.81 3283 3283 MS2 28/76 Linfeng_122411_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 54 3.20 0.00 0 31 100 2 883.37775 1765.74822 7.59 28.86 2930 2930 MS2 22/38 Linfeng_20120125_PCAF_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.20 0.00 0 16 25 4 828.83612 3312.32265 4.35 21.29 1647 1647 MS2 46/228 Linfeng_122411_rIgG_8.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 232 3.20 0.00 0 10 25 2 563.27313 1125.53899 -2.93 21.18 2212 2212 MS2 16/18 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 278 3.20 0.00 0 21 25 3 553.27026 1657.79624 1.99 25.19 1935 1935 MS2 23/64 Linfeng_122411_rIgG_9.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 271 3.19 0.00 1 6 25 2 670.83734 1340.66741 -1.40 18.92 1905 1905 MS2 19/22 Linfeng_091311_rIgG_3.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.19 0.00 1 17 25 3 648.00012 1941.98581 -0.98 41.82 4949 4949 MS2 27/64 Linfeng_091311_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 3.18 0.00 1 10 25 3 533.94763 1599.82834 -3.38 34.62 3997 3997 MS2 30/52 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 3.18 0.00 1 7 46 2 1175.11890 2349.23052 5.11 55.26 7752 7752 MS2 18/40 Linfeng_20120125_PCAF_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.18 0.00 0 2 23 2 679.35632 1357.70537 7.01 38.41 4518 4518 MS2 20/22 Linfeng_20120125_PCAF_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.18 0.00 0 9 100 3 1104.78149 3312.32993 6.55 19.71 1387 1387 MS2 26/152 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 250 3.18 0.00 0 4 1 2 639.36255 1277.71782 6.10 48.55 7142 7142 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.18 0.00 0 23 25 2 639.36115 1277.71501 3.90 47.56 5036 5036 MS2 18/20 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.18 0.00 0 21 100 2 858.93451 1716.86174 6.15 34.59 3488 3488 MS2 20/28 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.18 0.00 0 33 100 2 738.40088 1475.79448 6.21 25.70 1871 1871 MS2 20/22 Linfeng_20120125_PCAF_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 3.18 0.00 0 12 100 2 829.40631 1657.80535 7.48 33.41 3138 3138 MS2 19/32 Linfeng_20120125_PCAF_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 58 3.17 0.00 0 10 100 2 883.37836 1765.74944 8.28 29.19 2446 2446 MS2 21/38 Linfeng_20120125_PCAF_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 3.17 0.00 0 41 25 3 422.55157 1265.64017 2.30 26.71 2363 2363 MS2 23/40 Linfeng_122411_rIgG_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.17 0.00 0 12 25 2 738.37659 1475.74590 -2.06 37.02 4323 4323 MS2 20/22 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.17 0.00 0 25 100 2 858.93481 1716.86235 6.51 35.82 4511 4511 MS2 16/28 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 3.17 0.00 0 7 9 2 692.34625 1383.68523 -3.71 36.75 4314 4314 MS2 19/22 Linfeng_091311_rIgG_3.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 200 3.17 0.00 0 8 10 2 563.27423 1125.54119 -0.97 4.11 440 440 MS2 16/18 Linfeng_122411_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.16 0.00 0 7 18 3 453.23596 1357.69333 -1.86 32.03 2913 2913 MS2 31/44 Linfeng_122411_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 3.16 0.00 2 12 25 4 626.06940 2501.25576 1.54 29.47 2642 2642 MS2 41/126 Linfeng_122411_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 294 3.16 0.00 0 4 2 2 692.34888 1383.69048 0.08 35.90 3556 3556 MS2 19/22 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.16 0.00 0 12 100 2 883.37646 1765.74565 6.14 34.33 4150 4150 MS2 21/38 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 3.16 0.00 0 17 100 3 572.95929 1716.86332 7.07 33.94 3649 3649 MS2 27/56 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 3.16 0.00 0 3 100 2 858.93567 1716.86406 7.50 33.57 3172 3172 MS2 18/28 Linfeng_20120125_PCAF_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.16 0.00 0 16 13 2 738.37634 1475.74541 -2.39 36.75 4315 4315 MS2 19/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 490 3.16 0.00 0 64 100 2 679.35608 1357.70488 6.65 39.40 4972 4972 MS2 20/22 Linfeng_20120125_PCAF_10.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 3.15 0.00 1 20 25 3 783.74719 2349.22702 3.63 51.75 5458 5458 MS2 26/80 Linfeng_122411_rIgG_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.15 0.00 0 0 100 2 858.93182 1716.85637 3.02 33.63 4103 4103 MS2 21/28 Linfeng_20120125_PCAF_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 293 3.15 0.00 0 3 20 2 692.34918 1383.69109 0.52 36.05 3489 3489 MS2 19/22 Linfeng_122411_rIgG_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 3.15 0.00 0 3 100 2 858.93317 1716.85906 4.59 33.34 4045 4045 MS2 20/28 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.14 0.00 0 3 25 2 590.30487 1179.60246 1.69 27.02 2577 2577 MS2 17/18 Linfeng_122411_rIgG_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 212 3.14 0.00 0 2 25 2 563.27252 1125.53777 -4.01 21.44 2217 2217 MS2 16/18 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.14 0.00 0 14 100 2 738.40173 1475.79619 7.36 25.64 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 448 3.14 0.00 0 28 100 2 679.35663 1357.70598 7.46 38.52 4452 4452 MS2 20/22 Linfeng_20120125_PCAF_9.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.14 0.00 2 4 17 4 626.06927 2501.25527 1.34 29.71 2733 2733 MS2 42/126 Linfeng_122411_rIgG_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 14 25 2 670.83673 1340.66619 -2.31 18.90 1929 1929 MS2 19/22 Linfeng_091311_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 3.14 0.00 0 8 100 2 883.37720 1765.74712 6.97 35.22 4365 4365 MS2 23/38 Linfeng_20120125_PCAF_1.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.14 0.00 1 8 100 2 670.84247 1340.67766 6.25 17.68 1300 1300 MS2 18/22 Linfeng_20120125_PCAF_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 3.13 0.00 1 4 25 2 670.83783 1340.66838 -0.67 19.12 1888 1888 MS2 19/22 Linfeng_091311_rIgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 121 3.13 0.00 0 19 100 3 855.73041 2565.17667 3.81 29.94 3084 3084 MS2 27/100 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 3.13 0.00 0 7 25 2 692.34961 1383.69194 1.14 35.80 3659 3659 MS2 19/22 Linfeng_122411_rIgG_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 3.13 0.00 0 6 100 3 855.73328 2565.18528 7.16 28.57 2335 2335 MS2 30/100 Linfeng_20120125_PCAF_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 249 3.13 0.00 0 28 25 3 553.26770 1657.78855 -2.65 30.40 3468 3468 MS2 32/64 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 306 3.13 0.00 0 9 25 2 639.36017 1277.71306 2.37 38.56 4056 4056 MS2 18/20 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 60 3.13 0.00 0 0 100 2 883.37665 1765.74602 6.35 31.40 3521 3521 MS2 21/38 Linfeng_20120125_PCAF_5.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.13 0.00 1 40 25 3 777.06464 2329.17936 2.15 36.28 3604 3604 MS2 27/80 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 3.13 0.00 0 12 12 2 692.34540 1383.68352 -4.94 36.74 4362 4362 MS2 19/22 Linfeng_091311_rIgG_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 3.12 0.00 1 24 20 3 508.60065 1523.78739 -0.86 29.47 2960 2960 MS2 24/44 Linfeng_122411_rIgG_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 300 3.12 0.00 1 11 100 2 670.84235 1340.67742 6.07 17.94 1141 1141 MS2 17/22 Linfeng_20120125_PCAF_3.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 560 3.12 0.00 1 3 2 3 434.90494 1302.70026 -0.77 3.57 360 360 MS2 25/40 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 255 3.12 0.00 0 14 79 2 829.40002 1657.79277 -0.10 32.45 3814 3814 MS2 19/32 Linfeng_20120125_PCAF_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 3.12 0.00 0 3 29 2 692.35449 1383.70171 8.20 46.25 6374 6374 MS2 19/22 Linfeng_20120125_PCAF_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 3.12 0.00 0 35 25 2 651.86359 1302.71990 3.61 43.71 4295 4295 MS2 19/22 Linfeng_122411_rIgG_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.12 0.00 0 26 25 3 589.25012 1765.73581 0.57 25.47 2414 2414 MS2 33/76 Linfeng_122411_rIgG_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 3.12 0.00 1 11 25 2 670.83728 1340.66728 -1.49 19.23 1922 1922 MS2 19/22 Linfeng_091311_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 3.12 0.00 0 3 5 2 590.30194 1179.59661 -3.28 28.30 3241 3241 MS2 17/18 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 3.12 0.00 0 6 25 3 461.90256 1383.69312 1.99 35.97 3540 3540 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.11 0.00 0 50 100 2 738.40167 1475.79607 7.28 25.64 2077 2077 MS2 19/22 Linfeng_20120125_PCAF_1.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 212 3.11 0.00 0 4 24 2 563.27301 1125.53874 -3.14 21.13 2241 2241 MS2 16/18 Linfeng_091311_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 260 3.11 0.00 0 5 100 2 829.40491 1657.80254 5.79 32.73 3430 3430 MS2 19/32 Linfeng_20120125_PCAF_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.11 0.00 0 7 16 2 692.34625 1383.68523 -3.71 37.09 4316 4316 MS2 19/22 Linfeng_091311_rIgG_9.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 202 3.11 0.00 0 4 22 2 563.27271 1125.53813 -3.69 21.46 2296 2296 MS2 16/18 Linfeng_091311_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 3.11 0.00 0 2 3 2 651.85986 1302.71245 -2.10 44.52 5111 5111 MS2 19/22 Linfeng_091311_rIgG_1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 132 3.10 0.00 1 4 25 2 844.49078 1687.97429 2.43 31.84 3212 3212 MS2 20/32 Linfeng_122411_rIgG_6.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 268 3.10 0.00 1 49 25 3 447.56000 1340.66544 -2.87 18.91 1892 1892 MS2 23/44 Linfeng_091311_rIgG_4.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 538 3.10 0.00 1 33 25 3 434.90579 1302.70282 1.20 22.67 1999 1999 MS2 24/40 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 294 3.10 0.00 0 2 25 2 858.92731 1716.84734 -2.24 30.67 3524 3524 MS2 21/28 Linfeng_091311_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.10 0.00 0 3 25 3 492.58871 1475.75159 1.80 34.27 2951 2951 MS2 27/44 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 3.10 0.00 0 4 52 2 692.35382 1383.70036 7.23 46.29 6072 6072 MS2 19/22 Linfeng_20120125_PCAF_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 3.10 0.00 2 21 100 4 626.07300 2501.27016 7.30 38.92 4547 4547 MS2 36/126 Linfeng_20120125_PCAF_9.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 3.10 0.00 1 6 100 2 800.42548 1599.84368 6.20 43.08 5300 5300 MS2 21/26 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 3.10 0.00 0 8 4 2 639.35724 1277.70720 -2.22 39.64 4465 4465 MS2 18/20 Linfeng_091311_rIgG_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 3.10 0.00 1 13 100 3 533.95129 1599.83933 3.49 43.73 5671 5671 MS2 28/52 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.10 0.00 0 5 2 2 692.34839 1383.68950 -0.62 35.82 3835 3835 MS2 19/22 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 3.10 0.00 0 55 100 2 858.93604 1716.86479 7.93 34.93 3720 3720 MS2 21/28 Linfeng_20120125_PCAF_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.10 0.00 0 10 25 2 679.35229 1357.69731 1.08 32.57 3306 3306 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.09 0.00 0 22 100 2 738.40057 1475.79387 5.79 37.76 4979 4979 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 3.09 0.00 1 0 100 2 670.84283 1340.67839 6.80 15.11 957 957 MS2 19/22 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 3.09 0.00 1 18 100 2 800.42487 1599.84245 5.44 42.60 6119 6119 MS2 21/26 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 3.09 0.00 1 17 25 2 697.36823 1393.72917 -2.19 24.81 2718 2718 MS2 18/22 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.09 0.00 0 5 12 2 692.34583 1383.68437 -4.33 36.78 4311 4311 MS2 19/22 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 239 3.08 0.00 0 20 89 2 829.39856 1657.78984 -1.87 32.35 3785 3785 MS2 19/32 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 3.08 0.00 0 18 25 2 590.30518 1179.60307 2.21 27.17 2540 2540 MS2 17/18 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 3.08 0.00 0 11 3 2 590.30255 1179.59783 -2.24 4.18 451 451 MS2 17/18 Linfeng_122411_rIgG_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.08 0.00 0 6 100 2 997.49847 1993.98967 6.50 55.98 8351 8351 MS2 17/30 Linfeng_20120125_PCAF_1.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 81 3.08 0.00 1 2 25 3 693.97589 2079.91312 -0.82 2.93 274 274 MS2 36/108 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 3.08 0.00 0 3 8 2 651.86017 1302.71306 -1.64 44.73 5314 5314 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 352 3.07 0.00 0 21 25 3 461.90118 1383.68900 -0.98 35.89 3844 3844 MS2 24/44 Linfeng_122411_rIgG_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 3.07 0.00 0 79 25 3 665.32947 1993.97385 -1.43 49.24 5884 5884 MS2 24/60 Linfeng_091311_rIgG_4.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 258 3.07 0.00 1 9 8 3 447.56039 1340.66663 -1.98 18.91 1904 1904 MS2 25/44 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 35 3.07 0.00 0 10 100 2 883.37555 1765.74382 5.10 34.05 4079 4079 MS2 26/38 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 3.07 0.00 0 6 8 2 590.30212 1179.59697 -2.97 28.41 2945 2945 MS2 17/18 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 3.07 0.00 0 11 100 2 679.35455 1357.70183 4.40 2.06 195 195 MS2 19/22 Linfeng_20120125_PCAF_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.07 0.00 1 33 100 2 800.42810 1599.84892 9.48 43.18 5539 5539 MS2 20/26 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 3.06 0.00 0 28 25 2 692.34991 1383.69255 1.58 35.87 3527 3527 MS2 19/22 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.06 0.00 0 3 13 3 492.58887 1475.75205 2.11 35.70 3531 3531 MS2 30/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.05 0.00 0 27 100 2 738.40045 1475.79363 5.63 29.88 3068 3068 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 3.05 0.00 1 7 100 3 533.95331 1599.84537 7.26 42.94 5104 5104 MS2 26/52 Linfeng_20120125_PCAF_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 60 3.05 0.00 0 3 100 2 883.37811 1765.74895 8.00 29.71 2547 2547 MS2 24/38 Linfeng_20120125_PCAF_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.05 0.00 0 0 100 2 883.37573 1765.74419 5.31 29.07 2359 2359 MS2 17/38 Linfeng_20120125_PCAF_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.05 0.00 2 4 100 4 626.07330 2501.27138 7.78 39.17 4606 4606 MS2 35/126 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 3.05 0.00 0 27 25 2 651.86371 1302.72014 3.80 53.31 5290 5290 MS2 18/22 Linfeng_122411_rIgG_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 3.05 0.00 0 18 25 4 499.25058 1993.98049 1.89 43.79 4146 4146 MS2 36/90 Linfeng_122411_rIgG_7.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 257 3.05 0.00 1 57 25 3 447.56049 1340.66690 -1.77 19.12 1938 1938 MS2 23/44 Linfeng_091311_rIgG_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 3.04 0.00 0 20 6 2 738.38129 1475.75530 4.31 44.88 6672 6672 MS2 17/22 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.04 0.00 0 12 25 2 651.86383 1302.72038 3.99 43.82 4469 4469 MS2 19/22 Linfeng_122411_rIgG_8.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 3.04 0.00 2 45 100 3 834.42828 2501.27030 7.35 39.08 4345 4345 MS2 35/84 Linfeng_20120125_PCAF_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.04 0.00 2 22 25 4 626.06885 2501.25356 0.66 28.56 2446 2446 MS2 37/126 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 387 3.04 0.00 0 20 100 2 738.40088 1475.79448 6.21 25.68 1879 1879 MS2 19/22 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 3.04 0.00 0 48 100 2 590.30786 1179.60845 6.76 27.92 2228 2228 MS2 17/18 Linfeng_20120125_PCAF_9.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 500 3.04 0.00 1 7 9 3 434.90405 1302.69760 -2.81 3.92 434 434 MS2 23/40 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 126 3.03 0.00 0 30 100 3 855.73254 2565.18308 6.30 29.73 3032 3032 MS2 29/100 Linfeng_20120125_PCAF_1.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 211 3.03 0.00 0 24 25 2 563.27222 1125.53716 -4.55 21.47 2232 2232 MS2 16/18 Linfeng_091311_rIgG_7.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 250 3.03 0.00 0 4 4 2 563.27478 1125.54228 0.00 3.24 327 327 MS2 16/18 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.03 0.00 0 13 15 2 590.30402 1179.60076 0.24 27.14 2638 2638 MS2 17/18 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 3.03 0.00 0 53 100 2 858.93530 1716.86333 7.08 34.86 4278 4278 MS2 21/28 Linfeng_20120125_PCAF_1.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 213 3.03 0.00 0 8 25 2 563.27313 1125.53899 -2.93 21.40 2252 2252 MS2 16/18 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 3.03 0.00 0 55 25 2 651.86401 1302.72075 4.27 54.30 5577 5577 MS2 17/22 Linfeng_122411_rIgG_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 3.02 0.00 0 61 100 2 858.93536 1716.86345 7.15 34.96 4302 4302 MS2 18/28 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.02 0.00 0 0 100 2 858.93329 1716.85930 4.73 34.86 3925 3925 MS2 19/28 Linfeng_20120125_PCAF_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 315 3.02 0.00 0 18 25 2 692.34576 1383.68425 -4.42 36.99 4307 4307 MS2 19/22 Linfeng_091311_rIgG_7.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 502 3.02 0.00 1 8 2 3 434.90427 1302.69825 -2.31 3.74 385 385 MS2 24/40 Linfeng_122411_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 280 3.02 0.00 0 50 25 3 553.26953 1657.79404 0.66 27.80 2427 2427 MS2 33/64 Linfeng_122411_rIgG_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 3.02 0.00 0 11 100 2 858.93579 1716.86431 7.64 34.59 3562 3562 MS2 21/28 Linfeng_20120125_PCAF_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 3.02 0.00 0 0 25 2 829.40271 1657.79814 3.14 29.15 2311 2311 MS2 20/32 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.01 0.00 0 18 25 2 692.34625 1383.68523 -3.71 37.05 4393 4393 MS2 18/22 Linfeng_091311_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 3.01 0.00 0 31 25 3 589.25085 1765.73801 1.81 27.23 2433 2433 MS2 28/76 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.01 0.00 0 4 20 2 590.30267 1179.59807 -2.04 28.26 3198 3198 MS2 17/18 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 58 3.01 0.00 0 5 100 2 883.37646 1765.74565 6.14 35.12 4342 4342 MS2 24/38 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 51 3.01 0.00 0 14 100 2 883.37744 1765.74761 7.24 30.85 3410 3410 MS2 19/38 Linfeng_20120125_PCAF_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 3.01 0.00 0 3 25 2 692.34937 1383.69145 0.79 36.09 3746 3746 MS2 19/22 Linfeng_122411_rIgG_6.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 3.01 0.00 2 18 19 4 626.06763 2501.24868 -1.29 29.49 2962 2962 MS2 39/126 Linfeng_122411_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 262 3.00 0.00 0 23 25 2 829.40320 1657.79912 3.73 24.88 1899 1899 MS2 17/32 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 3.00 0.00 0 9 17 2 679.35046 1357.69365 -1.62 32.28 3348 3348 MS2 20/22 Linfeng_122411_rIgG_5.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 2.99 0.00 1 55 100 3 762.71851 2286.14096 7.02 40.09 5078 5078 MS2 23/76 Linfeng_20120125_PCAF_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.99 0.00 0 26 25 2 679.34924 1357.69121 -3.42 27.59 2835 2835 MS2 20/22 Linfeng_091311_rIgG_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.99 0.00 1 8 25 2 762.39795 1523.78862 -0.05 29.85 2783 2783 MS2 17/22 Linfeng_122411_rIgG_2.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 2.99 0.00 2 12 25 4 626.07001 2501.25820 2.51 29.52 2853 2853 MS2 40/126 Linfeng_122411_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.99 0.00 0 32 25 2 651.86377 1302.72026 3.89 53.08 5715 5715 MS2 17/22 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 2.99 0.00 0 2 59 2 692.35352 1383.69975 6.79 46.25 5882 5882 MS2 18/22 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.99 0.00 0 1 15 2 590.30219 1179.59709 -2.86 28.60 3208 3208 MS2 17/18 Linfeng_091311_rIgG_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.98 0.00 0 38 100 2 679.35486 1357.70244 4.85 1.43 99 99 MS2 19/22 Linfeng_20120125_PCAF_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 2.98 0.00 1 5 100 2 670.84241 1340.67754 6.16 17.83 1142 1142 MS2 18/22 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 2.98 0.00 0 40 100 2 858.93567 1716.86406 7.50 34.96 3475 3475 MS2 17/28 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.98 0.00 0 10 25 2 590.30310 1179.59892 -1.31 28.29 3196 3196 MS2 17/18 Linfeng_091311_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.98 0.00 0 32 100 2 679.35645 1357.70561 7.19 38.54 4244 4244 MS2 19/22 Linfeng_20120125_PCAF_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.98 0.00 1 3 100 2 800.42578 1599.84429 6.58 42.98 5767 5767 MS2 22/26 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 2.98 0.00 0 63 100 2 590.30713 1179.60698 5.52 28.18 2504 2504 MS2 17/18 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 22 100 2 858.93481 1716.86235 6.51 33.56 3562 3562 MS2 17/28 Linfeng_20120125_PCAF_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 200 2.97 0.00 0 12 25 2 546.75433 1092.50139 -1.39 3.36 341 341 MS2 20/26 Linfeng_091311_rIgG_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.97 0.00 1 2 25 2 697.36780 1393.72832 -2.81 24.53 2721 2721 MS2 18/22 Linfeng_091311_rIgG_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.97 0.00 0 21 25 2 738.37830 1475.74932 0.25 35.84 3461 3461 MS2 18/22 Linfeng_122411_rIgG_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.97 0.00 1 4 2 2 697.36963 1393.73198 -0.18 3.48 347 347 MS2 18/22 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 253 2.96 0.00 0 0 91 2 829.39929 1657.79131 -0.99 32.32 3775 3775 MS2 19/32 Linfeng_20120125_PCAF_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 2.96 0.00 0 58 25 3 665.32904 1993.97257 -2.08 45.55 5385 5385 MS2 28/60 Linfeng_091311_rIgG_9.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 2.96 0.00 0 7 100 3 855.73114 2565.17887 4.66 28.20 2326 2326 MS2 28/100 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.96 0.00 0 57 100 2 590.30695 1179.60661 5.21 28.08 2486 2486 MS2 16/18 Linfeng_20120125_PCAF_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.96 0.00 1 0 100 2 800.42432 1599.84136 4.75 1.89 169 169 MS2 20/26 Linfeng_20120125_PCAF_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 2.96 0.00 0 14 25 2 651.85986 1302.71245 -2.10 44.82 5299 5299 MS2 19/22 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.96 0.00 0 11 25 2 590.30243 1179.59758 -2.45 28.37 3308 3308 MS2 17/18 Linfeng_091311_rIgG_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.96 0.00 1 8 25 3 648.00208 1941.99167 2.04 41.01 4187 4187 MS2 29/64 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 473 2.96 0.00 0 27 25 3 434.90985 1302.71500 -0.15 43.61 4897 4897 MS2 27/44 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.96 0.00 0 28 25 2 590.30481 1179.60234 1.59 27.24 2269 2269 MS2 17/18 Linfeng_122411_rIgG_10.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.95 0.00 1 12 25 2 697.36755 1393.72783 -3.16 24.40 2403 2403 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.95 0.00 0 3 12 2 651.85999 1302.71269 -1.92 44.97 5312 5312 MS2 19/22 Linfeng_091311_rIgG_7.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.95 0.00 0 23 25 2 738.37970 1475.75212 2.16 35.73 3289 3289 MS2 17/22 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 2.95 0.00 0 25 25 2 692.34601 1383.68474 -4.06 36.96 4454 4454 MS2 19/22 Linfeng_091311_rIgG_10.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.95 0.00 0 12 25 4 499.25043 1993.97988 1.59 43.75 4461 4461 MS2 38/90 Linfeng_122411_rIgG_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 2.94 0.00 0 29 100 3 855.73169 2565.18052 5.31 27.70 2652 2652 MS2 29/100 Linfeng_20120125_PCAF_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.94 0.00 1 9 100 2 697.37433 1393.74138 6.56 22.41 1670 1670 MS2 17/22 Linfeng_20120125_PCAF_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 2.94 0.00 0 79 100 2 679.35638 1357.70549 7.10 39.99 4881 4881 MS2 16/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.94 0.00 0 17 25 2 590.30298 1179.59868 -1.52 28.48 3160 3160 MS2 17/18 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.94 0.00 0 22 25 2 590.30511 1179.60295 2.10 27.27 2439 2439 MS2 17/18 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.94 0.00 1 4 25 2 819.93536 1638.86345 2.17 37.39 3745 3745 MS2 18/26 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.93 0.00 0 40 100 2 590.30798 1179.60869 6.97 28.11 2312 2312 MS2 17/18 Linfeng_20120125_PCAF_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 2.93 0.00 0 31 25 2 997.48962 1993.97197 -2.38 44.83 5394 5394 MS2 18/30 Linfeng_091311_rIgG_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 302 2.93 0.00 1 10 100 2 670.84259 1340.67790 6.43 15.18 1002 1002 MS2 17/22 Linfeng_20120125_PCAF_4.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.92 0.00 0 4 23 3 492.58859 1475.75122 1.55 35.64 3497 3497 MS2 27/44 Linfeng_122411_rIgG_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.92 0.00 1 21 100 3 508.60458 1523.79920 6.89 40.33 5581 5581 MS2 20/44 Linfeng_20120125_PCAF_1.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.92 0.00 1 7 25 3 647.99969 1941.98453 -1.64 42.12 4953 4953 MS2 25/64 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 488 2.92 0.00 0 3 6 2 651.86060 1302.71391 -0.98 44.63 5371 5371 MS2 19/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.92 0.00 0 26 100 2 738.40045 1475.79363 5.63 29.96 3089 3089 MS2 17/22 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.92 0.00 0 16 18 2 651.86157 1302.71587 0.52 1.39 198 198 MS2 19/22 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 253 2.92 0.00 0 2 1 2 639.36127 1277.71526 4.09 48.56 6817 6817 MS2 18/20 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.92 0.00 0 2 33 2 590.30756 1179.60784 6.24 26.88 2047 2047 MS2 17/18 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 2.92 0.00 0 43 25 2 692.34656 1383.68584 -3.27 36.96 4275 4275 MS2 18/22 Linfeng_091311_rIgG_5.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.92 0.00 1 31 100 3 615.65753 1844.95804 6.44 30.69 2776 2776 MS2 26/60 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 2.91 0.00 0 0 25 3 1104.77600 3312.31345 1.58 21.10 1597 1597 MS2 30/152 Linfeng_122411_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.91 0.00 0 2 15 2 651.86005 1302.71282 -1.82 44.65 5307 5307 MS2 19/22 Linfeng_091311_rIgG_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 2.91 0.00 1 10 25 2 670.83759 1340.66789 -1.03 19.13 1939 1939 MS2 19/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.91 0.00 0 0 14 3 492.58728 1475.74729 -1.12 35.70 3818 3818 MS2 26/44 Linfeng_122411_rIgG_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 2.91 0.00 0 15 100 2 997.49542 1993.98357 3.44 55.26 7583 7583 MS2 18/30 Linfeng_20120125_PCAF_4.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.91 0.00 1 10 25 3 777.06323 2329.17514 0.34 35.91 3157 3157 MS2 26/80 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 2.91 0.00 0 4 100 2 858.93500 1716.86272 6.72 34.53 3629 3629 MS2 20/28 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 264 2.91 0.00 0 4 0 2 639.36035 1277.71343 2.66 48.56 7582 7582 MS2 18/20 Linfeng_20120125_PCAF_1.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 310 2.90 0.00 1 2 100 2 670.84186 1340.67644 5.34 17.93 1184 1184 MS2 17/22 Linfeng_20120125_PCAF_4.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.90 0.00 0 14 100 2 738.38391 1475.76055 7.86 48.37 7051 7051 MS2 18/22 Linfeng_20120125_PCAF_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 2.90 0.00 0 31 25 2 651.86371 1302.72014 3.80 49.79 5062 5062 MS2 18/22 Linfeng_122411_rIgG_9.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.90 0.00 1 4 5 2 697.36951 1393.73174 -0.35 3.42 359 359 MS2 18/22 Linfeng_122411_rIgG_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 2.89 0.00 1 0 100 2 697.37347 1393.73967 5.34 22.54 1583 1583 MS2 15/22 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 269 2.89 0.00 0 2 1 2 639.36029 1277.71330 2.56 48.57 6448 6448 MS2 18/20 Linfeng_20120125_PCAF_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.89 0.00 1 9 100 2 922.98285 1844.95842 6.65 30.68 3263 3263 MS2 22/30 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 2.89 0.00 1 7 25 2 697.36810 1393.72893 -2.37 24.57 2693 2693 MS2 18/22 Linfeng_091311_rIgG_3.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 213 2.89 0.00 0 3 25 2 563.27313 1125.53899 -2.93 21.13 2214 2214 MS2 16/18 Linfeng_091311_rIgG_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 181 2.89 0.00 0 17 25 2 546.75525 1092.50322 0.28 11.20 903 903 MS2 20/26 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.89 0.00 0 24 100 2 590.30829 1179.60930 7.48 28.59 2234 2234 MS2 16/18 Linfeng_20120125_PCAF_3.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.89 0.00 2 32 25 4 626.06964 2501.25673 1.93 28.69 2380 2380 MS2 37/126 Linfeng_122411_rIgG_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 263 2.88 0.00 0 6 27 2 639.36163 1277.71599 4.66 55.12 8144 8144 MS2 18/20 Linfeng_20120125_PCAF_1.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 189 2.88 0.00 0 11 25 2 546.75439 1092.50151 -1.28 3.23 315 315 MS2 20/26 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 275 2.88 0.00 0 16 25 2 639.36072 1277.71416 3.23 44.12 4597 4597 MS2 18/20 Linfeng_122411_rIgG_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 478 2.88 0.00 0 19 7 2 738.38202 1475.75676 5.30 43.88 6704 6704 MS2 16/22 Linfeng_20120125_PCAF_5.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 2.87 0.00 1 1 25 2 819.93524 1638.86321 2.02 37.28 3329 3329 MS2 18/26 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 2.87 0.00 0 32 100 2 692.35291 1383.69853 5.91 45.35 5859 5859 MS2 17/22 Linfeng_20120125_PCAF_7.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.87 0.00 1 42 100 3 508.60486 1523.80002 7.43 40.68 4729 4729 MS2 22/44 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.87 0.00 0 4 18 2 590.30463 1179.60198 1.28 24.92 2341 2341 MS2 17/18 Linfeng_122411_rIgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 126 2.87 0.00 0 20 100 3 855.73260 2565.18326 6.38 28.74 2892 2892 MS2 23/100 Linfeng_20120125_PCAF_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 451 2.87 0.00 0 12 25 3 434.91104 1302.71857 2.59 43.54 4633 4633 MS2 29/44 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.87 0.00 0 3 17 2 590.30231 1179.59734 -2.66 28.51 3215 3215 MS2 17/18 Linfeng_091311_rIgG_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 209 2.87 0.00 0 11 23 2 563.27264 1125.53801 -3.79 21.41 2206 2206 MS2 16/18 Linfeng_091311_rIgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 2.87 0.00 0 5 100 3 855.73157 2565.18015 5.16 28.46 2553 2553 MS2 27/100 Linfeng_20120125_PCAF_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.87 0.00 0 13 100 2 829.40625 1657.80522 7.41 33.39 3370 3370 MS2 18/32 Linfeng_20120125_PCAF_4.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.87 0.00 0 20 4 2 738.38177 1475.75627 4.97 44.90 6240 6240 MS2 17/22 Linfeng_20120125_PCAF_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 225 2.86 0.00 0 22 25 2 563.27277 1125.53826 -3.58 21.29 2314 2314 MS2 16/18 Linfeng_091311_rIgG_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 2.86 0.00 1 0 25 3 762.71680 2286.13584 4.78 31.88 2290 2290 MS2 27/76 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 281 2.86 0.00 0 44 25 2 639.36108 1277.71489 3.80 55.44 5969 5969 MS2 17/20 Linfeng_122411_rIgG_2.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.86 0.00 1 54 25 3 447.56055 1340.66709 -1.64 19.06 1879 1879 MS2 24/44 Linfeng_091311_rIgG_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.86 0.00 1 0 100 2 800.42419 1599.84111 4.60 1.74 143 143 MS2 20/26 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.86 0.00 0 5 12 2 590.30194 1179.59661 -3.28 28.55 3266 3266 MS2 17/18 Linfeng_091311_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 306 2.86 0.00 0 4 100 2 692.35413 1383.70098 7.67 46.41 5918 5918 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.86 0.00 0 25 25 2 651.86328 1302.71929 3.14 47.46 4774 4774 MS2 18/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 2 20 2 590.30200 1179.59673 -3.17 28.57 3203 3203 MS2 17/18 Linfeng_091311_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 2.85 0.00 0 5 100 2 858.93481 1716.86235 6.51 1.60 119 119 MS2 15/28 Linfeng_20120125_PCAF_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.85 0.00 0 4 8 2 633.32635 1265.64543 6.46 29.65 3013 3013 MS2 18/20 Linfeng_20120125_PCAF_1.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 193 2.85 0.00 0 23 25 2 546.75403 1092.50078 -1.95 3.04 299 299 MS2 20/26 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 257 2.85 0.00 1 16 25 3 447.56021 1340.66608 -2.39 18.86 1923 1923 MS2 22/44 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.85 0.00 0 10 22 3 453.23590 1357.69315 -1.99 33.49 3885 3885 MS2 31/44 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.85 0.00 0 4 25 2 633.32318 1265.63909 1.44 27.71 2668 2668 MS2 18/20 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.84 0.00 0 1 70 2 590.30835 1179.60942 7.59 27.01 2070 2070 MS2 17/18 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 2.84 0.00 0 15 100 2 738.40125 1475.79521 6.70 25.68 1807 1807 MS2 19/22 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.84 0.00 0 20 25 2 590.30457 1179.60185 1.17 27.38 2373 2373 MS2 17/18 Linfeng_122411_rIgG_8.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.84 0.00 2 5 17 3 401.23318 1201.68500 -4.14 16.16 1543 1543 MS2 22/36 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.84 0.00 0 64 100 2 590.30780 1179.60832 6.66 28.20 2325 2325 MS2 17/18 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 302 2.84 0.00 0 19 25 2 639.35883 1277.71037 0.27 57.35 6547 6547 MS2 18/20 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 446 2.84 0.00 0 8 25 2 651.85785 1302.70842 -5.20 44.83 5288 5288 MS2 19/22 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 379 2.83 0.00 0 40 25 2 651.86475 1302.72222 5.39 43.49 3359 3359 MS2 19/22 Linfeng_122411_rIgG_1.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 106 2.83 0.00 0 0 100 2 1283.09546 2565.18364 6.52 28.46 2733 2733 MS2 21/50 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.83 0.00 0 0 100 2 858.93445 1716.86162 6.08 35.03 3967 3967 MS2 18/28 Linfeng_20120125_PCAF_10.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.83 0.00 1 40 25 3 563.33020 1687.97605 3.47 31.88 2651 2651 MS2 28/64 Linfeng_122411_rIgG_7.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.83 0.00 2 5 25 4 626.06708 2501.24648 -2.17 30.56 3510 3510 MS2 38/126 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.83 0.00 0 21 100 2 651.86523 1302.72319 6.14 11.42 841 841 MS2 19/22 Linfeng_20120125_PCAF_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 2.83 0.00 0 9 25 3 434.91116 1302.71894 2.88 43.79 4305 4305 MS2 29/44 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 2.83 0.00 0 8 100 2 590.30823 1179.60918 7.38 30.03 2819 2819 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 486 2.82 0.00 0 22 25 2 651.86041 1302.71355 -1.26 44.88 5300 5300 MS2 19/22 Linfeng_091311_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 2.82 0.00 0 18 92 2 692.35339 1383.69951 6.61 45.10 6727 6727 MS2 19/22 Linfeng_20120125_PCAF_1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 326 2.82 0.00 1 22 100 3 762.71869 2286.14151 7.26 39.89 5030 5030 MS2 30/76 Linfeng_20120125_PCAF_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 258 2.82 0.00 0 8 100 2 829.40558 1657.80388 6.60 33.05 3215 3215 MS2 19/32 Linfeng_20120125_PCAF_9.raw Medium QISNLQQSISDAEQRGENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.82 0.00 2 3 100 4 661.59332 2643.35146 6.84 48.00 6287 6287 MS2 32/138 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.81 0.00 1 7 25 2 697.36804 1393.72881 -2.46 24.57 2686 2686 MS2 18/22 Linfeng_091311_rIgG_4.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.81 0.00 2 22 25 3 401.23306 1201.68463 -4.44 16.38 1559 1559 MS2 23/36 Linfeng_091311_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 2.81 0.00 1 0 100 2 800.42371 1599.84014 3.99 1.80 154 154 MS2 20/26 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.80 0.00 0 24 100 2 590.30725 1179.60723 5.73 27.95 2284 2284 MS2 17/18 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 2.80 0.00 0 34 100 2 738.40155 1475.79582 7.12 38.10 4356 4356 MS2 17/22 Linfeng_20120125_PCAF_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.80 0.00 0 38 25 3 553.27136 1657.79953 3.98 29.09 2078 2078 MS2 26/64 Linfeng_122411_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.80 0.00 0 17 25 2 651.86243 1302.71758 1.83 37.01 3862 3862 MS2 19/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.80 0.00 0 7 25 2 639.35742 1277.70757 -1.93 39.55 4662 4662 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 2.80 0.00 2 4 25 4 626.06671 2501.24502 -2.76 30.80 3521 3521 MS2 42/126 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 2.80 0.00 0 29 100 2 858.93536 1716.86345 7.15 34.73 3830 3830 MS2 17/28 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.80 0.00 0 35 25 2 651.86230 1302.71733 1.64 36.15 3187 3187 MS2 19/22 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 2.80 0.00 0 43 100 2 883.37610 1765.74492 5.72 28.51 2746 2746 MS2 21/38 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.80 0.00 0 40 25 2 651.86322 1302.71916 3.05 49.19 4825 4825 MS2 17/22 Linfeng_122411_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 340 2.80 0.00 0 11 25 2 633.32440 1265.64153 3.37 27.94 2179 2179 MS2 17/20 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.79 0.00 0 14 25 3 572.95648 1716.85489 2.16 29.97 2411 2411 MS2 24/56 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 2.79 0.00 0 86 100 2 679.35571 1357.70415 6.11 39.33 4956 4956 MS2 19/22 Linfeng_20120125_PCAF_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.79 0.00 0 34 100 2 679.35754 1357.70781 8.81 1.93 208 208 MS2 16/22 Linfeng_20120125_PCAF_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 2.79 0.00 0 9 100 2 858.93628 1716.86528 8.21 33.58 3337 3337 MS2 15/28 Linfeng_20120125_PCAF_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.79 0.00 1 41 100 3 615.65796 1844.95932 7.14 30.88 2767 2767 MS2 19/60 Linfeng_20120125_PCAF_9.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 2.79 0.00 1 8 100 2 670.84241 1340.67754 6.16 15.14 1158 1158 MS2 18/22 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 276 2.79 0.00 0 14 25 2 639.36023 1277.71318 2.47 41.60 4276 4276 MS2 18/20 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.79 0.00 0 5 3 2 633.32239 1265.63750 0.19 4.42 487 487 MS2 17/20 Linfeng_122411_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.78 0.00 0 33 25 2 590.30536 1179.60344 2.52 25.96 2380 2380 MS2 17/18 Linfeng_122411_rIgG_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 132 2.78 0.00 0 9 100 3 855.73352 2565.18601 7.45 28.37 2540 2540 MS2 27/100 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 2.78 0.00 0 24 100 2 738.40173 1475.79619 7.36 38.09 4445 4445 MS2 17/22 Linfeng_20120125_PCAF_4.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.78 0.00 0 10 25 4 499.25089 1993.98171 2.51 43.69 4540 4540 MS2 39/90 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 2.78 0.00 0 44 25 2 633.31952 1265.63176 -4.35 29.21 3354 3354 MS2 18/20 Linfeng_091311_rIgG_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 258 2.77 0.00 1 9 25 3 447.56049 1340.66690 -1.77 19.21 1919 1919 MS2 25/44 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.77 0.00 0 9 15 2 633.32336 1265.63945 1.73 26.97 2514 2514 MS2 17/20 Linfeng_122411_rIgG_4.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 334 2.77 0.00 1 9 25 2 697.36816 1393.72905 -2.28 24.92 2707 2707 MS2 16/22 Linfeng_091311_rIgG_7.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.77 0.00 0 2 25 4 499.24863 1993.97268 -2.02 44.81 5392 5392 MS2 35/90 Linfeng_091311_rIgG_8.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 326 2.77 0.00 0 39 100 2 997.49701 1993.98674 5.03 55.92 7458 7458 MS2 16/30 Linfeng_20120125_PCAF_3.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 2.77 0.00 2 7 100 4 626.07257 2501.26845 6.61 38.75 4303 4303 MS2 39/126 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.76 0.00 0 4 100 2 590.30835 1179.60942 7.59 27.26 2116 2116 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 267 2.76 0.00 0 19 25 2 639.35938 1277.71147 1.13 57.08 6542 6542 MS2 18/20 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.76 0.00 0 14 16 2 651.85999 1302.71269 -1.92 44.93 5407 5407 MS2 19/22 Linfeng_091311_rIgG_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.76 0.00 0 11 100 2 679.35516 1357.70305 5.30 37.43 5039 5039 MS2 19/22 Linfeng_20120125_PCAF_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 269 2.76 0.00 1 4 1 3 447.55957 1340.66416 -3.82 1.84 233 233 MS2 26/44 Linfeng_091311_rIgG_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 324 2.76 0.00 0 5 46 2 692.35016 1383.69304 1.94 44.30 6832 6832 MS2 19/22 Linfeng_20120125_PCAF_5.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 2.76 0.00 2 22 100 4 626.07318 2501.27089 7.59 38.75 4312 4312 MS2 34/126 Linfeng_20120125_PCAF_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.76 0.00 0 9 63 2 997.49554 1993.98381 3.56 55.25 7292 7292 MS2 18/30 Linfeng_20120125_PCAF_7.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 2.76 0.00 2 3 100 4 626.07251 2501.26821 6.52 39.77 4524 4524 MS2 34/126 Linfeng_20120125_PCAF_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.75 0.00 1 10 100 2 922.98267 1844.95806 6.45 31.48 3454 3454 MS2 17/30 Linfeng_20120125_PCAF_1.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.75 0.00 1 5 100 2 670.84222 1340.67717 5.89 15.08 1093 1093 MS2 16/22 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.75 0.00 1 37 25 2 697.37122 1393.73516 2.10 21.75 1875 1875 MS2 17/22 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.75 0.00 0 3 31 2 590.30768 1179.60808 6.45 26.74 2023 2023 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 286 2.75 0.00 0 51 25 2 639.36121 1277.71514 3.99 54.35 5853 5853 MS2 17/20 Linfeng_122411_rIgG_2.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 218 2.75 0.00 0 4 100 2 546.75934 1092.51140 7.77 3.09 223 223 MS2 20/26 Linfeng_20120125_PCAF_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.75 0.00 0 10 100 2 858.93524 1716.86321 7.00 34.59 3394 3394 MS2 17/28 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.75 0.00 0 49 25 2 590.30280 1179.59831 -1.83 58.93 6958 6958 MS2 15/18 Linfeng_091311_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 2.75 0.00 0 3 100 2 858.93555 1716.86382 7.36 35.49 4079 4079 MS2 16/28 Linfeng_20120125_PCAF_10.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 2.75 0.00 1 21 25 2 697.36774 1393.72820 -2.89 24.88 2764 2764 MS2 18/22 Linfeng_091311_rIgG_8.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.75 0.00 1 2 7 3 648.00055 1941.98709 -0.32 40.99 4544 4544 MS2 29/64 Linfeng_122411_rIgG_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 309 2.75 0.00 0 5 100 2 692.35413 1383.70098 7.67 46.48 6430 6430 MS2 18/22 Linfeng_20120125_PCAF_4.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.75 0.00 1 26 100 3 508.60455 1523.79911 6.83 40.21 5551 5551 MS2 18/44 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.74 0.00 0 23 100 2 692.35309 1383.69890 6.17 45.34 6156 6156 MS2 18/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 2.74 0.00 0 2 58 2 590.30823 1179.60918 7.38 26.94 2059 2059 MS2 17/18 Linfeng_20120125_PCAF_9.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 194 2.74 0.00 0 19 25 2 546.75452 1092.50176 -1.06 3.54 371 371 MS2 20/26 Linfeng_091311_rIgG_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 253 2.74 0.00 0 53 25 2 639.36023 1277.71318 2.47 48.60 5166 5166 MS2 18/20 Linfeng_122411_rIgG_2.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 354 2.74 0.00 2 50 100 4 626.07379 2501.27334 8.57 40.49 5172 5172 MS2 34/126 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.74 0.00 0 47 25 2 651.86499 1302.72270 5.77 2.67 369 369 MS2 19/22 Linfeng_122411_rIgG_1.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.74 0.00 0 17 25 4 499.25122 1993.98305 3.18 43.60 4523 4523 MS2 42/90 Linfeng_122411_rIgG_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 295 2.74 0.00 0 6 100 2 997.50146 1993.99565 9.50 55.84 8327 8327 MS2 17/30 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 2.74 0.00 0 68 100 2 590.30829 1179.60930 7.48 28.27 2520 2520 MS2 17/18 Linfeng_20120125_PCAF_6.raw Medium NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 2.73 0.00 2 11 25 4 546.78595 2184.12197 -1.67 41.52 4912 4912 MS2 33/108 Linfeng_091311_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 2.73 0.00 0 21 100 2 883.37592 1765.74455 5.52 33.84 4026 4026 MS2 21/38 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.73 0.00 0 28 100 2 651.86603 1302.72478 7.36 11.02 829 829 MS2 19/22 Linfeng_20120125_PCAF_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 2.73 0.00 0 21 100 2 858.93536 1716.86345 7.15 34.72 3891 3891 MS2 16/28 Linfeng_20120125_PCAF_10.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.73 0.00 0 23 25 4 499.25110 1993.98256 2.94 43.37 4612 4612 MS2 32/90 Linfeng_122411_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 2.73 0.00 0 3 36 2 633.32611 1265.64495 6.07 30.29 3167 3167 MS2 17/20 Linfeng_20120125_PCAF_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 2.73 0.00 0 21 100 2 883.37531 1765.74333 4.82 32.73 2986 2986 MS2 17/38 Linfeng_20120125_PCAF_3.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.72 0.00 1 3 16 2 819.93500 1638.86272 1.72 48.49 6421 6421 MS2 18/26 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.72 0.00 0 4 4 2 633.32556 1265.64385 5.20 29.48 2972 2972 MS2 17/20 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 463 2.72 0.00 0 14 16 3 434.90878 1302.71180 -2.61 44.53 5113 5113 MS2 24/44 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 267 2.72 0.00 0 15 25 2 639.35748 1277.70769 -1.83 57.90 6603 6603 MS2 17/20 Linfeng_091311_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 203 2.72 0.00 0 5 100 2 546.75885 1092.51042 6.88 3.10 208 208 MS2 17/26 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.72 0.00 0 57 100 2 679.35565 1357.70403 6.02 39.95 5495 5495 MS2 18/22 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.72 0.00 0 22 100 2 590.30829 1179.60930 7.48 28.73 2422 2422 MS2 17/18 Linfeng_20120125_PCAF_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 322 2.72 0.00 0 4 94 2 692.35388 1383.70049 7.32 46.25 6570 6570 MS2 18/22 Linfeng_20120125_PCAF_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 2.71 0.00 0 19 100 2 858.93481 1716.86235 6.51 35.89 4525 4525 MS2 16/28 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 2.71 0.00 0 32 25 2 651.86340 1302.71953 3.33 48.40 5141 5141 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 248 2.71 0.00 0 24 25 2 639.36096 1277.71465 3.61 52.60 5658 5658 MS2 18/20 Linfeng_122411_rIgG_2.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.71 0.00 1 0 25 4 538.27356 2150.07241 -2.52 41.93 5031 5031 MS2 31/96 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 2.71 0.00 0 20 25 3 572.95337 1716.84555 -3.28 30.82 3645 3645 MS2 25/56 Linfeng_091311_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 2.71 0.00 0 2 27 2 590.30780 1179.60832 6.66 26.79 2032 2032 MS2 17/18 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.71 0.00 0 6 55 2 590.30725 1179.60723 5.73 29.91 3076 3076 MS2 17/18 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 2.71 0.00 0 4 10 2 633.32611 1265.64495 6.07 29.28 2927 2927 MS2 17/20 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 2.71 0.00 1 21 100 2 697.37445 1393.74162 6.74 22.44 1476 1476 MS2 17/22 Linfeng_20120125_PCAF_9.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 190 2.70 0.00 0 8 25 2 546.75433 1092.50139 -1.39 3.01 286 286 MS2 20/26 Linfeng_091311_rIgG_3.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.70 0.00 1 5 25 2 697.36835 1393.72942 -2.02 24.84 2667 2667 MS2 17/22 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.70 0.00 0 1 100 2 590.30768 1179.60808 6.45 27.34 2354 2354 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.70 0.00 0 52 25 2 651.86316 1302.71904 2.96 54.46 5786 5786 MS2 15/22 Linfeng_122411_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.70 0.00 0 42 25 2 651.86359 1302.71990 3.61 53.22 5461 5461 MS2 16/22 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 2.70 0.00 0 15 100 2 692.35327 1383.69927 6.44 45.35 5675 5675 MS2 18/22 Linfeng_20120125_PCAF_2.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.70 0.00 1 13 25 4 538.27618 2150.08291 2.36 42.41 4380 4380 MS2 29/96 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 2.70 0.00 0 21 100 2 590.30817 1179.60906 7.28 29.18 2494 2494 MS2 15/18 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.70 0.00 0 3 31 2 590.30762 1179.60796 6.35 26.76 2242 2242 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.70 0.00 0 5 5 3 434.91040 1302.71665 1.12 43.79 4553 4553 MS2 30/44 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 2.69 0.00 0 1 100 2 590.30719 1179.60710 5.62 27.10 2060 2060 MS2 17/18 Linfeng_20120125_PCAF_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.69 0.00 0 27 100 3 572.95978 1716.86478 7.92 34.15 3465 3465 MS2 26/56 Linfeng_20120125_PCAF_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 332 2.69 0.00 0 21 25 2 639.35999 1277.71269 2.08 38.68 3768 3768 MS2 18/20 Linfeng_122411_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.69 0.00 0 5 100 2 590.30774 1179.60820 6.55 29.95 2806 2806 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 2.69 0.00 0 29 25 2 633.32385 1265.64043 2.50 26.66 2330 2330 MS2 18/20 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.69 0.00 0 2 100 2 590.30774 1179.60820 6.55 27.05 2056 2056 MS2 17/18 Linfeng_20120125_PCAF_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.69 0.00 0 20 25 2 633.32373 1265.64018 2.31 26.46 2330 2330 MS2 17/20 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.69 0.00 0 7 100 2 858.93542 1716.86357 7.22 33.57 3287 3287 MS2 18/28 Linfeng_20120125_PCAF_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.69 0.00 0 15 25 2 639.35748 1277.70769 -1.83 40.82 4627 4627 MS2 18/20 Linfeng_091311_rIgG_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 295 2.69 0.00 0 12 7 2 633.31982 1265.63237 -3.86 28.95 3286 3286 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.69 0.00 0 6 25 3 393.87201 1179.60147 0.85 27.15 2595 2595 MS2 19/36 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 2.69 0.00 0 45 25 2 590.30524 1179.60320 2.31 25.16 2130 2130 MS2 17/18 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 2.69 0.00 1 13 100 3 533.95343 1599.84574 7.49 43.14 5619 5619 MS2 26/52 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.69 0.00 0 28 25 3 393.87234 1179.60248 1.70 25.37 2157 2157 MS2 18/36 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.68 0.00 0 10 25 3 434.91046 1302.71683 1.26 43.76 4143 4143 MS2 29/44 Linfeng_122411_rIgG_7.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 2.68 0.00 1 3 100 2 697.37396 1393.74065 6.04 22.60 1727 1727 MS2 15/22 Linfeng_20120125_PCAF_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.68 0.00 0 38 25 2 651.86212 1302.71697 1.36 46.32 5032 5032 MS2 18/22 Linfeng_122411_rIgG_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 2.68 0.00 0 3 23 2 633.32666 1265.64604 6.94 29.30 2513 2513 MS2 17/20 Linfeng_20120125_PCAF_4.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 2.68 0.00 2 100 3 834.42792 2501.26920 6.91 38.68 4287 4287 MS2 25/84 Linfeng_20120125_PCAF_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.68 0.00 0 1 78 2 633.32562 1265.64397 5.30 28.48 2739 2739 MS2 18/20 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.68 0.00 0 80 100 2 633.32672 1265.64617 7.04 30.97 2827 2827 MS2 16/20 Linfeng_20120125_PCAF_4.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.68 0.00 1 15 25 4 538.27661 2150.08462 3.16 41.42 4254 4254 MS2 32/96 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 322 2.68 0.00 0 11 25 2 639.35724 1277.70720 -2.22 41.68 4931 4931 MS2 18/20 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.68 0.00 0 25 25 2 633.32239 1265.63750 0.19 25.81 2460 2460 MS2 18/20 Linfeng_122411_rIgG_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.68 0.00 1 27 100 3 508.60471 1523.79956 7.13 40.68 5216 5216 MS2 23/44 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.68 0.00 0 26 25 2 651.86261 1302.71794 2.11 36.74 3416 3416 MS2 19/22 Linfeng_122411_rIgG_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.67 0.00 0 8 100 2 679.35699 1357.70671 8.00 10.93 811 811 MS2 18/22 Linfeng_20120125_PCAF_10.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 180 2.67 0.00 0 19 25 2 546.75433 1092.50139 -1.39 11.01 860 860 MS2 18/26 Linfeng_091311_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.67 0.00 0 43 25 2 590.30524 1179.60320 2.31 28.17 2205 2205 MS2 16/18 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 342 2.67 0.00 1 2 19 2 819.93494 1638.86260 1.64 37.55 3740 3740 MS2 19/26 Linfeng_122411_rIgG_3.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.67 0.00 1 14 25 4 538.27631 2150.08339 2.59 41.71 4204 4204 MS2 29/96 Linfeng_122411_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.67 0.00 0 1 69 2 590.30798 1179.60869 6.97 26.66 2221 2221 MS2 17/18 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 336 2.67 0.00 0 10 25 2 639.35712 1277.70696 -2.41 39.72 4662 4662 MS2 18/20 Linfeng_091311_rIgG_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 225 2.67 0.00 0 22 100 2 546.75903 1092.51079 7.21 12.53 796 796 MS2 22/26 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.66 0.00 0 20 100 2 590.30859 1179.60991 8.00 27.79 2204 2204 MS2 16/18 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.66 0.00 0 2 55 2 590.30756 1179.60784 6.24 26.98 2282 2282 MS2 17/18 Linfeng_20120125_PCAF_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 181 2.66 0.00 0 18 25 2 546.75494 1092.50261 -0.27 11.75 957 957 MS2 20/26 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.66 0.00 0 30 25 2 651.86310 1302.71892 2.86 44.93 4292 4292 MS2 18/22 Linfeng_122411_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.66 0.00 0 56 25 2 633.32391 1265.64055 2.60 22.78 1798 1798 MS2 14/20 Linfeng_122411_rIgG_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 247 2.66 0.00 0 10 25 2 639.36072 1277.71416 3.23 54.23 6415 6415 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.66 0.00 1 49 100 3 533.95306 1599.84464 6.81 43.03 5779 5779 MS2 23/52 Linfeng_20120125_PCAF_6.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 2.66 0.00 2 21 25 3 401.23364 1201.68637 -2.99 15.94 1486 1486 MS2 19/36 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 354 2.66 0.00 0 3 23 2 633.32672 1265.64617 7.04 29.76 3147 3147 MS2 18/20 Linfeng_20120125_PCAF_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.65 0.00 0 16 100 2 679.35583 1357.70439 6.29 37.51 4223 4223 MS2 18/22 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 2.65 0.00 0 65 100 2 692.35345 1383.69963 6.70 45.22 5647 5647 MS2 18/22 Linfeng_20120125_PCAF_2.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 2.65 0.00 2 8 25 4 626.06604 2501.24233 -3.83 30.96 3528 3528 MS2 37/126 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.65 0.00 0 46 25 2 651.86365 1302.72002 3.71 49.43 5395 5395 MS2 18/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.65 0.00 0 47 25 2 639.36005 1277.71282 2.18 51.42 5981 5981 MS2 18/20 Linfeng_091311_rIgG_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 2.65 0.00 0 8 100 2 692.35345 1383.69963 6.70 44.95 6936 6936 MS2 18/22 Linfeng_20120125_PCAF_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 316 2.65 0.00 0 9 25 2 639.35718 1277.70708 -2.31 39.73 4653 4653 MS2 18/20 Linfeng_091311_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 219 2.65 0.00 0 13 100 2 546.75806 1092.50884 5.42 3.10 262 262 MS2 19/26 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.65 0.00 0 20 100 2 590.30719 1179.60710 5.62 29.86 2471 2471 MS2 17/18 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.64 0.00 0 12 25 2 639.35724 1277.70720 -2.22 40.53 4853 4853 MS2 18/20 Linfeng_091311_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 2.64 0.00 1 37 100 3 533.95361 1599.84629 7.84 43.25 5556 5556 MS2 26/52 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 456 2.64 0.00 0 18 25 3 434.91074 1302.71765 1.89 43.74 4704 4704 MS2 29/44 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.64 0.00 0 1 100 2 590.30792 1179.60857 6.86 27.18 2072 2072 MS2 17/18 Linfeng_20120125_PCAF_7.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.64 0.00 1 7 25 4 538.27356 2150.07241 -2.52 42.13 4987 4987 MS2 31/96 Linfeng_091311_rIgG_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 220 2.64 0.00 0 4 100 2 546.75818 1092.50908 5.65 3.09 323 323 MS2 20/26 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 379 2.64 0.00 0 5 100 2 590.30719 1179.60710 5.62 26.56 2201 2201 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.64 0.00 0 50 100 2 590.30762 1179.60796 6.35 27.99 2286 2286 MS2 16/18 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 256 2.64 0.00 0 0 3 2 639.36066 1277.71404 3.13 48.56 6651 6651 MS2 18/20 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.63 0.00 0 17 25 2 639.35803 1277.70879 -0.97 58.46 6793 6793 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.63 0.00 0 2 37 2 590.30768 1179.60808 6.45 26.89 2266 2266 MS2 17/18 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 481 2.63 0.00 0 19 100 2 679.35638 1357.70549 7.10 11.08 779 779 MS2 18/22 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 2.63 0.00 0 6 100 2 590.30780 1179.60832 6.66 26.62 1900 1900 MS2 17/18 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 285 2.63 0.00 0 22 25 2 639.35754 1277.70781 -1.74 46.15 5566 5566 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.63 0.00 0 5 100 2 590.30792 1179.60857 6.86 30.11 2833 2833 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.63 0.00 0 40 100 2 590.30786 1179.60845 6.76 28.66 2586 2586 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.62 0.00 0 56 25 2 651.86316 1302.71904 2.96 44.77 4836 4836 MS2 17/22 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.62 0.00 0 2 100 2 590.30585 1179.60442 3.35 26.89 2455 2455 MS2 17/18 Linfeng_20120125_PCAF_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 302 2.62 0.00 0 3 25 2 633.32056 1265.63384 -2.71 29.17 3286 3286 MS2 18/20 Linfeng_091311_rIgG_9.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.62 0.00 2 76 100 4 626.07312 2501.27065 7.49 38.66 4283 4283 MS2 31/126 Linfeng_20120125_PCAF_7.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.62 0.00 1 16 25 4 538.27625 2150.08315 2.47 41.65 3875 3875 MS2 28/96 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.62 0.00 0 28 100 2 590.30847 1179.60967 7.80 28.62 2240 2240 MS2 16/18 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.62 0.00 0 39 25 2 651.86414 1302.72099 4.45 49.42 5271 5271 MS2 16/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 360 2.62 0.00 0 26 25 2 639.35785 1277.70842 -1.26 47.00 5572 5572 MS2 18/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 454 2.62 0.00 0 8 21 3 434.91064 1302.71738 1.68 43.92 4482 4482 MS2 29/44 Linfeng_122411_rIgG_8.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 187 2.62 0.00 0 21 25 2 546.75391 1092.50054 -2.17 1.14 124 124 MS2 20/26 Linfeng_091311_rIgG_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.62 0.00 0 5 23 2 633.32050 1265.63371 -2.80 29.18 3305 3305 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.62 0.00 0 2 36 2 590.30798 1179.60869 6.97 26.71 2230 2230 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.61 0.00 0 33 25 2 590.30481 1179.60234 1.59 23.92 2206 2206 MS2 17/18 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.61 0.00 0 24 25 2 639.36078 1277.71428 3.33 49.59 5292 5292 MS2 15/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 298 2.61 0.00 0 6 25 2 639.35681 1277.70635 -2.88 40.79 4786 4786 MS2 18/20 Linfeng_091311_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 224 2.61 0.00 0 4 100 2 546.75830 1092.50932 5.87 3.10 210 210 MS2 20/26 Linfeng_20120125_PCAF_4.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 690 2.61 0.00 0 33 25 2 487.26700 973.52672 -4.74 27.81 3174 3174 MS2 12/14 Linfeng_091311_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 2.60 0.00 0 14 100 3 855.73450 2565.18894 8.59 29.30 2356 2356 MS2 30/100 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.60 0.00 0 59 100 2 590.30786 1179.60845 6.76 28.48 2558 2558 MS2 16/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.60 0.00 0 14 100 2 590.30823 1179.60918 7.38 26.54 1992 1992 MS2 17/18 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.60 0.00 0 9 20 3 434.91055 1302.71711 1.47 43.80 4426 4426 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.60 0.00 0 17 25 2 639.35687 1277.70647 -2.79 43.85 5205 5205 MS2 18/20 Linfeng_091311_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.60 0.00 1 62 100 3 533.95251 1599.84299 5.78 43.16 5320 5320 MS2 25/52 Linfeng_20120125_PCAF_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.60 0.00 0 4 42 2 633.32697 1265.64665 7.42 29.33 2693 2693 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 448 2.60 0.00 0 10 100 2 679.35645 1357.70561 7.19 37.67 4070 4070 MS2 16/22 Linfeng_20120125_PCAF_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 2.60 0.00 0 3 27 2 633.32568 1265.64409 5.40 28.85 2825 2825 MS2 17/20 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 2.60 0.00 1 15 100 3 465.25217 1393.74195 6.97 22.46 1592 1592 MS2 18/44 Linfeng_20120125_PCAF_2.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 169 2.60 0.00 0 17 25 2 546.75513 1092.50298 0.06 4.19 380 380 MS2 20/26 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.60 0.00 0 26 25 2 651.86206 1302.71684 1.27 46.07 4436 4436 MS2 18/22 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 371 2.60 0.00 0 15 100 3 572.95917 1716.86295 6.85 34.05 3271 3271 MS2 22/56 Linfeng_20120125_PCAF_7.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.59 0.00 0 4 21 4 499.24997 1993.97805 0.67 43.35 4864 4864 MS2 38/90 Linfeng_122411_rIgG_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 2.59 0.00 0 1 100 2 633.32684 1265.64641 7.23 30.35 2880 2880 MS2 18/20 Linfeng_20120125_PCAF_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.59 0.00 0 100 100 2 692.35175 1383.69621 4.23 43.25 6274 6274 MS2 19/22 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 278 2.59 0.00 0 9 25 2 639.35864 1277.71001 -0.02 56.85 6692 6692 MS2 17/20 Linfeng_091311_rIgG_5.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.59 0.00 0 5 25 3 492.58841 1475.75068 1.17 36.00 3735 3735 MS2 23/44 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.59 0.00 0 38 100 2 590.30829 1179.60930 7.48 28.49 2740 2740 MS2 17/18 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 2.59 0.00 0 20 100 2 858.93604 1716.86479 7.93 33.70 3658 3658 MS2 17/28 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 2.59 0.00 0 17 100 2 590.30743 1179.60759 6.04 27.76 2434 2434 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.59 0.00 0 4 100 2 590.30841 1179.60954 7.69 27.21 2106 2106 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 298 2.59 0.00 0 12 25 2 639.35742 1277.70757 -1.93 39.43 4653 4653 MS2 18/20 Linfeng_091311_rIgG_3.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 329 2.59 0.00 1 28 25 2 697.36804 1393.72881 -2.46 24.82 2692 2692 MS2 17/22 Linfeng_091311_rIgG_9.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 2.59 0.00 1 26 100 2 762.40350 1523.79973 7.24 40.72 5227 5227 MS2 14/22 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.59 0.00 0 56 25 2 590.30194 1179.59661 -3.28 58.93 6828 6828 MS2 15/18 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.58 0.00 0 32 25 2 651.86401 1302.72075 4.27 52.62 5721 5721 MS2 17/22 Linfeng_122411_rIgG_4.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.58 0.00 1 11 25 4 538.27338 2150.07168 -2.86 42.24 4957 4957 MS2 28/96 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 2.58 0.00 0 15 100 2 651.86383 1302.72038 3.99 48.69 7626 7626 MS2 18/22 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.58 0.00 0 14 25 2 639.35693 1277.70659 -2.69 43.98 5290 5290 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 257 2.58 0.00 0 27 25 2 639.36108 1277.71489 3.80 38.32 2863 2863 MS2 17/20 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.57 0.00 0 20 25 2 639.35675 1277.70622 -2.98 39.80 4662 4662 MS2 18/20 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 0 50 100 2 738.40088 1475.79448 6.21 38.78 5220 5220 MS2 15/22 Linfeng_20120125_PCAF_1.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.57 0.00 2 15 100 3 436.89230 1308.66236 6.16 17.30 1300 1300 MS2 19/36 Linfeng_20120125_PCAF_6.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.57 0.00 2 19 25 4 626.06946 2501.25600 1.64 30.10 2566 2566 MS2 33/126 Linfeng_122411_rIgG_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 328 2.57 0.00 0 24 25 2 633.32306 1265.63884 1.25 4.49 473 473 MS2 17/20 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 2.57 0.00 0 32 100 2 692.35516 1383.70305 9.17 11.01 771 771 MS2 17/22 Linfeng_20120125_PCAF_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 1 23 100 3 508.60474 1523.79966 7.19 40.54 5183 5183 MS2 23/44 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 446 2.57 0.00 0 51 25 3 434.91119 1302.71903 2.95 43.65 4529 4529 MS2 26/44 Linfeng_122411_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 315 2.57 0.00 0 0 25 2 639.35718 1277.70708 -2.31 41.60 4989 4989 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.57 0.00 0 39 25 3 393.87250 1179.60294 2.09 26.07 2395 2395 MS2 18/36 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.57 0.00 0 24 100 2 590.30798 1179.60869 6.97 28.05 2300 2300 MS2 17/18 Linfeng_20120125_PCAF_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 2.57 0.00 1 31 100 3 615.65704 1844.95658 5.65 31.32 3090 3090 MS2 17/60 Linfeng_20120125_PCAF_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.57 0.00 0 9 9 2 633.32001 1265.63274 -3.57 29.24 3261 3261 MS2 18/20 Linfeng_091311_rIgG_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 379 2.57 0.00 0 4 35 2 633.32733 1265.64739 8.00 29.39 2368 2368 MS2 18/20 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 310 2.57 0.00 0 2 3 2 639.36121 1277.71514 3.99 48.58 6633 6633 MS2 15/20 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 285 2.57 0.00 0 21 25 2 639.36041 1277.71355 2.75 51.59 5541 5541 MS2 17/20 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.57 0.00 0 4 95 2 651.86633 1302.72539 7.83 10.87 738 738 MS2 19/22 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 2.56 0.00 0 4 22 2 633.32574 1265.64421 5.49 28.94 2847 2847 MS2 17/20 Linfeng_20120125_PCAF_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 2.56 0.00 1 26 100 3 508.60483 1523.79993 7.37 40.40 4885 4885 MS2 19/44 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.56 0.00 0 35 25 2 651.86389 1302.72051 4.08 49.14 5331 5331 MS2 16/22 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.56 0.00 0 6 100 2 858.93439 1716.86150 6.01 35.15 3997 3997 MS2 18/28 Linfeng_20120125_PCAF_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.56 0.00 0 8 100 2 997.49683 1993.98638 4.85 55.36 7330 7330 MS2 18/30 Linfeng_20120125_PCAF_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 2.56 0.00 0 3 43 2 633.32648 1265.64568 6.65 30.32 2699 2699 MS2 18/20 Linfeng_20120125_PCAF_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 2.56 0.00 0 5 25 2 692.35089 1383.69451 3.00 35.88 2635 2635 MS2 16/22 Linfeng_122411_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.55 0.00 0 2 100 2 651.86560 1302.72392 6.70 11.47 853 853 MS2 19/22 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 2.55 0.00 0 3 88 2 633.32660 1265.64592 6.84 30.38 2697 2697 MS2 17/20 Linfeng_20120125_PCAF_2.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.55 0.00 1 3 100 2 670.84253 1340.67778 6.34 17.98 1348 1348 MS2 18/22 Linfeng_20120125_PCAF_6.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 490 2.55 0.00 1 14 100 3 434.90814 1302.70987 6.61 23.90 1808 1808 MS2 23/40 Linfeng_20120125_PCAF_6.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.55 0.00 1 87 100 3 508.60504 1523.80057 7.79 40.42 4671 4671 MS2 22/44 Linfeng_20120125_PCAF_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.55 0.00 0 18 77 3 572.95898 1716.86240 6.53 33.97 4187 4187 MS2 22/56 Linfeng_20120125_PCAF_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.55 0.00 0 68 100 2 590.30853 1179.60979 7.90 28.56 2571 2571 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.55 0.00 0 42 100 2 633.32593 1265.64458 5.78 30.76 3282 3282 MS2 18/20 Linfeng_20120125_PCAF_1.raw Medium SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 2.55 0.00 1 5 25 4 588.06030 2349.21938 0.37 52.86 6289 6289 MS2 38/120 Linfeng_091311_rIgG_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 346 2.55 0.00 0 13 25 3 461.90231 1383.69239 1.46 35.97 3681 3681 MS2 13/44 Linfeng_122411_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.55 0.00 0 12 86 2 633.32660 1265.64592 6.84 28.75 2903 2903 MS2 17/20 Linfeng_20120125_PCAF_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.55 0.00 0 4 9 2 633.32623 1265.64519 6.26 29.35 2943 2943 MS2 18/20 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 2.54 0.00 0 9 100 2 858.93475 1716.86223 6.44 35.08 3979 3979 MS2 18/28 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.54 0.00 0 9 100 2 590.30786 1179.60845 6.76 27.55 2393 2393 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.54 0.00 0 47 25 2 633.32098 1265.63469 -2.03 29.28 3300 3300 MS2 18/20 Linfeng_091311_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 2.54 0.00 0 68 100 2 692.35297 1383.69866 5.99 47.20 6287 6287 MS2 16/22 Linfeng_20120125_PCAF_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 225 2.54 0.00 0 7 100 2 546.75812 1092.50896 5.54 3.05 264 264 MS2 20/26 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.54 0.00 0 21 100 2 590.30786 1179.60845 6.76 29.92 2585 2585 MS2 17/18 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.54 0.00 0 31 100 2 679.35754 1357.70781 8.81 2.13 246 246 MS2 17/22 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 2.54 0.00 0 5 100 2 590.30762 1179.60796 6.35 26.65 2250 2250 MS2 17/18 Linfeng_20120125_PCAF_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 337 2.54 0.00 0 6 25 2 639.35815 1277.70903 -0.78 45.93 5466 5466 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.54 0.00 0 56 25 3 393.87210 1179.60175 1.08 24.37 2266 2266 MS2 20/36 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 2.54 0.00 1 19 13 3 777.06268 2329.17350 -0.36 36.13 3877 3877 MS2 27/80 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.54 0.00 0 11 25 2 639.35730 1277.70732 -2.12 39.69 4805 4805 MS2 18/20 Linfeng_091311_rIgG_10.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.54 0.00 1 23 100 3 615.65796 1844.95932 7.14 31.53 2942 2942 MS2 25/60 Linfeng_20120125_PCAF_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 213 2.54 0.00 0 7 100 2 546.75879 1092.51030 6.76 3.11 295 295 MS2 20/26 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.54 0.00 0 3 25 2 639.35712 1277.70696 -2.41 40.59 4794 4794 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.54 0.00 2 9 100 4 626.07312 2501.27065 7.49 38.59 4724 4724 MS2 37/126 Linfeng_20120125_PCAF_6.raw Medium QISNLQQSISDAEQRGENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.54 0.00 2 4 83 4 661.59332 2643.35146 6.84 47.99 6989 6989 MS2 29/138 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 496 2.54 0.00 0 29 25 2 651.86072 1302.71416 -0.79 47.82 5532 5532 MS2 18/22 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 2.54 0.00 0 17 100 2 590.30841 1179.60954 7.69 26.60 1993 1993 MS2 17/18 Linfeng_20120125_PCAF_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 2.53 0.00 1 39 100 2 800.42706 1599.84685 8.19 42.94 5256 5256 MS2 20/26 Linfeng_20120125_PCAF_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 2.53 0.00 0 48 100 2 692.35443 1383.70159 8.11 47.46 6856 6856 MS2 17/22 Linfeng_20120125_PCAF_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.53 0.00 0 4 81 2 633.32678 1265.64629 7.13 30.41 2533 2533 MS2 18/20 Linfeng_20120125_PCAF_3.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.53 0.00 1 24 25 4 538.27588 2150.08169 1.79 41.62 4436 4436 MS2 30/96 Linfeng_122411_rIgG_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 203 2.53 0.00 0 32 25 2 563.27344 1125.53960 -2.38 19.14 1682 1682 MS2 15/18 Linfeng_091311_rIgG_1.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.53 0.00 1 0 100 2 670.84259 1340.67790 6.43 17.87 1271 1271 MS2 16/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.52 0.00 0 7 100 2 590.30804 1179.60881 7.07 27.48 2150 2150 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.52 0.00 0 0 25 2 639.35840 1277.70952 -0.40 47.96 5722 5722 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.52 0.00 2 6 25 4 626.06708 2501.24648 -2.17 30.60 3508 3508 MS2 36/126 Linfeng_091311_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 463 2.52 0.00 0 10 100 2 679.35626 1357.70525 6.92 37.59 4493 4493 MS2 17/22 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.52 0.00 0 3 31 2 590.30798 1179.60869 6.97 26.79 2248 2248 MS2 17/18 Linfeng_20120125_PCAF_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.52 0.00 0 8 46 2 633.32678 1265.64629 7.13 29.36 2483 2483 MS2 18/20 Linfeng_20120125_PCAF_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.52 0.00 2 15 100 3 436.89246 1308.66281 6.51 14.25 898 898 MS2 15/36 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 284 2.52 0.00 0 21 25 2 639.35828 1277.70928 -0.59 47.07 5611 5611 MS2 18/20 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.52 0.00 0 38 100 2 590.30823 1179.60918 7.38 28.58 2398 2398 MS2 15/18 Linfeng_20120125_PCAF_2.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.52 0.00 1 2 25 4 538.27393 2150.07387 -1.84 42.25 4979 4979 MS2 30/96 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 338 2.52 0.00 0 0 100 2 858.93536 1716.86345 7.15 33.69 3190 3190 MS2 15/28 Linfeng_20120125_PCAF_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 380 2.52 0.00 0 12 100 2 679.35596 1357.70464 6.47 37.42 4290 4290 MS2 17/22 Linfeng_20120125_PCAF_4.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.52 0.00 2 42 100 3 728.71838 2184.14060 6.86 55.75 7616 7616 MS2 19/72 Linfeng_20120125_PCAF_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 256 2.52 0.00 0 26 100 2 829.40601 1657.80474 7.11 33.31 3275 3275 MS2 19/32 Linfeng_20120125_PCAF_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 2.52 0.00 0 17 100 2 679.35553 1357.70378 5.84 37.49 4545 4545 MS2 15/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.51 0.00 0 40 100 2 590.30823 1179.60918 7.38 27.85 2214 2214 MS2 15/18 Linfeng_20120125_PCAF_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 2.51 0.00 0 4 37 2 633.32642 1265.64556 6.55 29.38 2532 2532 MS2 17/20 Linfeng_20120125_PCAF_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.51 0.00 0 20 25 2 639.35724 1277.70720 -2.22 40.76 4793 4793 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.51 0.00 0 23 100 2 590.30847 1179.60967 7.80 26.63 2403 2403 MS2 17/18 Linfeng_20120125_PCAF_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 2.51 0.00 0 5 35 2 633.32605 1265.64482 5.97 29.36 3032 3032 MS2 17/20 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.51 0.00 0 31 100 2 590.30792 1179.60857 6.86 27.90 2276 2276 MS2 17/18 Linfeng_20120125_PCAF_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 107 2.51 0.00 0 0 4 3 855.72650 2565.16495 -0.76 4.00 427 427 MS2 31/100 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 2.51 0.00 0 22 100 2 651.86548 1302.72368 6.52 11.98 1009 1009 MS2 19/22 Linfeng_20120125_PCAF_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 309 2.50 0.00 0 8 100 2 692.35413 1383.70098 7.67 46.00 7191 7191 MS2 17/22 Linfeng_20120125_PCAF_8.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.50 0.00 1 40 25 4 538.27338 2150.07168 -2.86 42.42 4992 4992 MS2 28/96 Linfeng_091311_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 371 2.50 0.00 2 45 100 3 728.71844 2184.14078 6.95 55.83 7635 7635 MS2 23/72 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.50 0.00 0 21 100 2 590.30774 1179.60820 6.55 29.68 2754 2754 MS2 15/18 Linfeng_20120125_PCAF_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.50 0.00 0 28 100 2 633.32672 1265.64617 7.04 30.83 2758 2758 MS2 15/20 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.50 0.00 0 56 100 2 590.30743 1179.60759 6.04 27.89 2459 2459 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 462 2.50 0.00 0 6 20 3 434.90897 1302.71234 -2.18 44.90 5309 5309 MS2 24/44 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.50 0.00 0 39 25 2 590.30554 1179.60381 2.83 27.32 2419 2419 MS2 17/18 Linfeng_122411_rIgG_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.50 0.00 0 20 100 2 679.35577 1357.70427 6.20 37.21 4845 4845 MS2 18/22 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.50 0.00 0 18 25 2 639.35785 1277.70842 -1.26 49.38 5973 5973 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.49 0.00 0 42 25 2 590.30548 1179.60369 2.72 27.14 2091 2091 MS2 16/18 Linfeng_122411_rIgG_7.raw Medium QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 2.49 0.00 1 32 25 3 777.06378 2329.17679 1.05 36.30 3582 3582 MS2 24/80 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.49 0.00 0 28 25 2 633.31995 1265.63262 -3.67 28.90 3323 3323 MS2 18/20 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 458 2.49 0.00 0 29 100 2 679.35620 1357.70513 6.83 40.03 5113 5113 MS2 18/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.49 0.00 0 3 100 2 590.30804 1179.60881 7.07 27.36 2132 2132 MS2 17/18 Linfeng_20120125_PCAF_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 2.49 0.00 0 28 100 2 692.35376 1383.70024 7.14 44.89 6921 6921 MS2 17/22 Linfeng_20120125_PCAF_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.49 0.00 0 4 9 2 633.32611 1265.64495 6.07 29.40 2955 2955 MS2 17/20 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 298 2.49 0.00 0 3 5 2 633.32043 1265.63359 -2.90 29.07 3034 3034 MS2 18/20 Linfeng_091311_rIgG_1.raw Medium YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.48 0.00 0 34 25 3 393.87280 1179.60385 2.87 25.16 2156 2156 MS2 18/36 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.48 0.00 0 27 25 2 590.30371 1179.60015 -0.28 57.86 6745 6745 MS2 13/18 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.48 0.00 0 9 100 2 590.30780 1179.60832 6.66 27.49 2382 2382 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.48 0.00 0 16 100 2 590.30835 1179.60942 7.59 27.63 2071 2071 MS2 17/18 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.48 0.00 0 46 25 2 590.30371 1179.60015 -0.28 57.81 6865 6865 MS2 14/18 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.48 0.00 0 2 100 2 590.30719 1179.60710 5.62 27.28 2341 2341 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.48 0.00 1 2 9 2 819.93750 1638.86772 4.77 48.46 7110 7110 MS2 21/26 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.48 0.00 0 2 25 2 639.35706 1277.70683 -2.50 42.71 5061 5061 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 2.48 0.00 1 7 25 3 465.24707 1393.72666 -4.00 24.72 2797 2797 MS2 24/44 Linfeng_091311_rIgG_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 332 2.48 0.00 0 49 100 2 692.35345 1383.69963 6.70 45.24 6326 6326 MS2 16/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.48 0.00 0 27 25 2 651.86340 1302.71953 3.33 47.38 5161 5161 MS2 17/22 Linfeng_122411_rIgG_6.raw Medium WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.48 0.00 0 3 25 3 492.58643 1475.74472 -2.86 36.85 4300 4300 MS2 24/44 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.47 0.00 0 2 100 2 590.30804 1179.60881 7.07 27.39 2362 2362 MS2 17/18 Linfeng_20120125_PCAF_6.raw Medium WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.47 0.00 0 2 25 3 492.58850 1475.75095 1.36 35.73 3651 3651 MS2 23/44 Linfeng_122411_rIgG_4.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.47 0.00 1 2 25 3 717.36542 2150.08170 1.80 41.76 4454 4454 MS2 17/64 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 2.47 0.00 0 39 100 2 590.30811 1179.60893 7.17 29.71 2419 2419 MS2 17/18 Linfeng_20120125_PCAF_3.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.47 0.00 1 19 100 3 465.25134 1393.73948 5.20 27.17 2123 2123 MS2 20/44 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.47 0.00 0 40 25 2 590.30267 1179.59807 -2.04 29.66 3367 3367 MS2 16/18 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.47 0.00 0 10 25 2 651.86139 1302.71550 0.24 49.42 5906 5906 MS2 18/22 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.47 0.00 0 28 100 2 858.93561 1716.86394 7.43 34.63 3806 3806 MS2 16/28 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.47 0.00 0 42 25 2 590.30255 1179.59783 -2.24 29.37 3343 3343 MS2 17/18 Linfeng_091311_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.47 0.00 0 16 100 2 679.35760 1357.70793 8.90 11.01 772 772 MS2 18/22 Linfeng_20120125_PCAF_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 300 2.47 0.00 0 10 100 2 692.35461 1383.70195 8.38 46.41 6303 6303 MS2 17/22 Linfeng_20120125_PCAF_9.raw Medium KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.46 0.00 1 38 100 3 615.65826 1844.96024 7.64 30.75 2592 2592 MS2 22/60 Linfeng_20120125_PCAF_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 2.46 0.00 0 12 25 2 829.40283 1657.79839 3.29 24.97 1978 1978 MS2 16/32 Linfeng_122411_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.46 0.00 0 17 100 2 590.30841 1179.60954 7.69 28.57 2394 2394 MS2 16/18 Linfeng_20120125_PCAF_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.46 0.00 0 14 100 2 858.93402 1716.86077 5.58 34.69 3884 3884 MS2 17/28 Linfeng_20120125_PCAF_10.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 2.46 0.00 1 75 100 3 508.60468 1523.79947 7.07 40.23 5112 5112 MS2 21/44 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 330 2.46 0.00 0 20 25 2 639.35992 1277.71257 1.99 54.68 6585 6585 MS2 18/20 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 2.46 0.00 0 6 100 2 679.35608 1357.70488 6.65 37.54 4057 4057 MS2 17/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 2.45 0.00 0 23 25 2 651.86316 1302.71904 2.96 46.90 4952 4952 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 328 2.45 0.00 0 33 25 2 639.35712 1277.70696 -2.41 41.51 4915 4915 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.45 0.00 0 25 25 2 639.35742 1277.70757 -1.93 41.96 4933 4933 MS2 18/20 Linfeng_091311_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.45 0.00 0 18 100 2 590.30817 1179.60906 7.28 29.95 2592 2592 MS2 17/18 Linfeng_20120125_PCAF_9.raw Medium NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 488 2.45 0.00 1 24 100 3 434.90829 1302.71033 6.96 22.89 1713 1713 MS2 21/40 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.45 0.00 0 9 100 2 590.30774 1179.60820 6.55 27.69 2187 2187 MS2 17/18 Linfeng_20120125_PCAF_9.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.44 0.00 1 14 100 2 697.37524 1393.74321 7.88 22.53 1455 1455 MS2 15/22 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 293 2.44 0.00 0 12 25 2 639.35651 1277.70574 -3.36 39.73 4633 4633 MS2 18/20 Linfeng_091311_rIgG_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 371 2.44 0.00 1 7 100 2 697.37445 1393.74162 6.74 22.44 1590 1590 MS2 15/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 458 2.44 0.00 0 35 25 2 651.85931 1302.71135 -2.95 37.84 4445 4445 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.44 0.00 0 52 25 2 651.86298 1302.71868 2.67 46.70 5032 5032 MS2 18/22 Linfeng_122411_rIgG_4.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.44 0.00 1 10 24 3 465.24756 1393.72812 -2.95 24.73 2652 2652 MS2 22/44 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 2.44 0.00 0 48 25 2 590.30420 1179.60112 0.55 4.87 530 530 MS2 15/18 Linfeng_122411_rIgG_8.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 483 2.44 0.00 1 18 25 2 473.25323 945.49919 -0.90 3.19 310 310 MS2 14/16 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.44 0.00 0 10 100 2 590.30774 1179.60820 6.55 26.60 2016 2016 MS2 16/18 Linfeng_20120125_PCAF_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 535 2.43 0.00 0 7 7 2 487.26852 973.52977 -1.60 4.01 424 424 MS2 13/14 Linfeng_122411_rIgG_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 322 2.43 0.00 0 11 25 2 639.35876 1277.71025 0.17 50.14 5998 5998 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 298 2.43 0.00 0 21 25 2 639.35675 1277.70622 -2.98 45.08 5429 5429 MS2 18/20 Linfeng_091311_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 2.43 0.00 1 8 100 2 697.37518 1393.74309 7.79 22.53 1530 1530 MS2 16/22 Linfeng_20120125_PCAF_1.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.43 0.00 1 25 100 3 465.25162 1393.74030 5.79 26.91 1945 1945 MS2 22/44 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.43 0.00 0 34 25 2 651.85980 1302.71233 -2.20 49.38 5974 5974 MS2 18/22 Linfeng_091311_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 336 2.43 0.00 1 18 100 2 697.37390 1393.74053 5.95 22.50 1525 1525 MS2 15/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.43 0.00 0 48 25 2 590.30524 1179.60320 2.31 24.90 2121 2121 MS2 16/18 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 294 2.43 0.00 0 12 25 2 639.35815 1277.70903 -0.78 57.73 6858 6858 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.43 0.00 0 4 100 2 590.30786 1179.60845 6.76 27.25 2336 2336 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 2.43 0.00 1 3 19 2 819.93695 1638.86662 4.10 48.50 6602 6602 MS2 17/26 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.43 0.00 0 25 100 2 590.30792 1179.60857 6.86 29.03 2468 2468 MS2 16/18 Linfeng_20120125_PCAF_4.raw Medium GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 2.43 0.00 0 4 25 3 795.32422 2383.95810 2.57 20.97 1535 1535 MS2 25/120 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 2.43 0.00 0 14 100 2 858.93390 1716.86052 5.44 34.99 3956 3956 MS2 17/28 Linfeng_20120125_PCAF_10.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 238 2.42 0.00 0 37 25 2 533.26251 1065.51775 -3.19 20.82 2199 2199 MS2 14/16 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.42 0.00 0 59 100 2 590.30817 1179.60906 7.28 28.19 2762 2762 MS2 15/18 Linfeng_20120125_PCAF_5.raw Medium MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 135 2.42 0.00 0 0 100 3 855.73419 2565.18802 8.23 28.36 2301 2301 MS2 27/100 Linfeng_20120125_PCAF_9.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 2.42 0.00 1 4 10 3 465.24768 1393.72849 -2.69 24.79 2714 2714 MS2 23/44 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.42 0.00 0 12 25 2 639.35889 1277.71050 0.36 57.87 6780 6780 MS2 17/20 Linfeng_091311_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.42 0.00 0 22 100 2 858.93408 1716.86089 5.65 34.82 3916 3916 MS2 14/28 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 2.42 0.00 0 12 100 2 590.30798 1179.60869 6.97 29.84 2785 2785 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.42 0.00 0 17 100 2 651.86578 1302.72429 6.98 11.63 718 718 MS2 19/22 Linfeng_20120125_PCAF_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 2.42 0.00 0 6 100 2 679.35699 1357.70671 8.00 11.29 872 872 MS2 17/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.42 0.00 0 10 25 2 590.30426 1179.60124 0.65 56.69 6774 6774 MS2 16/18 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 334 2.42 0.00 0 0 25 2 639.35870 1277.71013 0.08 52.20 6228 6228 MS2 16/20 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.42 0.00 0 15 100 2 651.86603 1302.72478 7.36 11.37 889 889 MS2 19/22 Linfeng_20120125_PCAF_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 252 2.42 0.00 0 13 25 2 639.35742 1277.70757 -1.93 58.91 6875 6875 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 276 2.42 0.00 0 23 25 2 639.35724 1277.70720 -2.22 58.75 6942 6942 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 2.42 0.00 0 58 25 2 590.30292 1179.59856 -1.62 29.39 3352 3352 MS2 16/18 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 268 2.41 0.00 0 4 21 2 639.36115 1277.71501 3.90 55.14 7549 7549 MS2 18/20 Linfeng_20120125_PCAF_4.raw Medium GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 2.41 0.00 0 0 25 3 795.32440 2383.95865 2.80 21.11 1629 1629 MS2 22/120 Linfeng_122411_rIgG_8.raw Medium SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 259 2.41 0.00 1 33 25 3 447.55936 1340.66352 -4.30 19.19 1898 1898 MS2 24/44 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.41 0.00 0 26 25 2 651.86377 1302.72026 3.89 52.63 5737 5737 MS2 18/22 Linfeng_122411_rIgG_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 169 2.41 0.00 0 17 25 2 546.75500 1092.50273 -0.16 7.28 594 594 MS2 17/26 Linfeng_091311_rIgG_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.41 0.00 0 5 7 2 633.32617 1265.64507 6.17 29.59 2998 2998 MS2 17/20 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.41 0.00 0 39 25 2 651.86414 1302.72099 4.45 54.73 5942 5942 MS2 17/22 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.41 0.00 0 33 25 2 651.86353 1302.71977 3.52 54.32 5389 5389 MS2 17/22 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 469 2.41 0.00 0 30 100 2 679.35614 1357.70500 6.74 1.80 180 180 MS2 17/22 Linfeng_20120125_PCAF_2.raw Medium SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.41 0.00 1 34 25 3 447.55975 1340.66471 -3.41 19.15 1971 1971 MS2 22/44 Linfeng_091311_rIgG_8.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 244 2.41 0.00 0 18 100 2 563.27832 1125.54936 6.29 16.99 1081 1081 MS2 14/18 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 15 25 2 639.35632 1277.70537 -3.65 42.99 5166 5166 MS2 18/20 Linfeng_091311_rIgG_2.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.41 0.00 1 42 100 3 508.60428 1523.79828 6.29 40.48 4686 4686 MS2 16/44 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 285 2.41 0.00 0 20 25 2 639.35779 1277.70830 -1.36 48.39 5850 5850 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 2.41 0.00 0 47 25 2 651.86292 1302.71855 2.58 54.75 5895 5895 MS2 18/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.40 0.00 0 40 25 2 651.86279 1302.71831 2.39 45.03 4464 4464 MS2 15/22 Linfeng_122411_rIgG_9.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.40 0.00 0 76 100 3 665.33270 1993.98355 3.43 48.78 7929 7929 MS2 22/60 Linfeng_20120125_PCAF_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.40 0.00 0 51 25 2 590.30609 1179.60491 3.76 54.53 6571 6571 MS2 15/18 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.40 0.00 0 25 100 2 590.30762 1179.60796 6.35 27.88 2116 2116 MS2 16/18 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.40 0.00 0 37 25 2 651.86359 1302.71990 3.61 48.19 4704 4704 MS2 17/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.40 0.00 0 21 25 2 651.86096 1302.71465 -0.42 48.24 5728 5728 MS2 17/22 Linfeng_091311_rIgG_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.40 0.00 0 15 100 2 738.38391 1475.76055 7.86 47.17 6786 6786 MS2 16/22 Linfeng_20120125_PCAF_10.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 235 2.40 0.00 0 15 100 2 563.27789 1125.54851 5.53 17.01 1120 1120 MS2 15/18 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 307 2.40 0.00 0 19 25 2 639.35767 1277.70806 -1.55 50.47 6111 6111 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.40 0.00 0 29 25 2 651.86041 1302.71355 -1.26 45.84 5428 5428 MS2 18/22 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 275 2.40 0.00 0 17 25 2 639.36017 1277.71306 2.37 46.17 4859 4859 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 287 2.39 0.00 0 15 25 2 639.35754 1277.70781 -1.74 46.95 5593 5593 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.39 0.00 1 20 100 3 465.25171 1393.74057 5.99 22.51 1453 1453 MS2 22/44 Linfeng_20120125_PCAF_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 315 2.39 0.00 0 14 100 2 858.93512 1716.86296 6.86 11.17 800 800 MS2 13/28 Linfeng_20120125_PCAF_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 324 2.39 0.00 0 46 100 2 692.35406 1383.70085 7.58 45.38 6068 6068 MS2 17/22 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 2.39 0.00 0 18 100 2 590.30804 1179.60881 7.07 30.37 2885 2885 MS2 17/18 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 272 2.39 0.00 0 25 25 2 639.35858 1277.70989 -0.11 55.69 6680 6680 MS2 18/20 Linfeng_091311_rIgG_2.raw Medium VRFLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 312 2.39 0.00 1 46 25 3 577.65790 1730.95914 2.47 25.30 2175 2175 MS2 24/52 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.39 0.00 0 12 25 2 590.30566 1179.60405 3.04 27.22 1946 1946 MS2 13/18 Linfeng_122411_rIgG_1.raw Medium SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 273 2.38 0.00 0 74 25 3 553.27063 1657.79734 2.65 26.75 2125 2125 MS2 17/64 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.38 0.00 0 31 100 2 590.30774 1179.60820 6.55 27.70 2239 2239 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.38 0.00 0 27 25 2 639.35687 1277.70647 -2.79 40.79 4787 4787 MS2 18/20 Linfeng_091311_rIgG_9.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.38 0.00 1 10 100 2 762.40356 1523.79985 7.32 40.54 4623 4623 MS2 13/22 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 2.38 0.00 0 11 100 2 590.30774 1179.60820 6.55 26.56 2045 2045 MS2 16/18 Linfeng_20120125_PCAF_2.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 199 2.38 0.00 0 22 100 2 546.75867 1092.51006 6.54 12.51 872 872 MS2 19/26 Linfeng_20120125_PCAF_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 328 2.38 0.00 0 49 25 2 639.36115 1277.71501 3.90 42.71 4418 4418 MS2 17/20 Linfeng_122411_rIgG_2.raw Medium MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 105 2.38 0.00 0 0 4 3 855.72589 2565.16312 -1.48 3.81 423 423 MS2 26/100 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 310 2.38 0.00 0 29 25 2 639.35852 1277.70976 -0.21 52.38 6257 6257 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.38 0.00 0 23 100 2 651.86542 1302.72356 6.42 45.34 6155 6155 MS2 18/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 2.37 0.00 0 51 25 2 590.30542 1179.60356 2.62 29.99 2414 2414 MS2 15/18 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 416 2.37 0.00 0 46 100 2 738.40057 1475.79387 5.79 38.23 4200 4200 MS2 14/22 Linfeng_20120125_PCAF_3.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.37 0.00 1 39 25 3 508.59988 1523.78510 -2.36 30.88 3544 3544 MS2 20/44 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.37 0.00 0 27 25 2 639.35663 1277.70598 -3.17 39.76 4747 4747 MS2 18/20 Linfeng_091311_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.37 0.00 0 16 100 2 651.86707 1302.72685 8.95 1.76 175 175 MS2 18/22 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 415 2.37 0.00 0 17 100 2 590.30872 1179.61016 8.21 28.89 2288 2288 MS2 16/18 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.37 0.00 0 44 25 2 590.30566 1179.60405 3.04 51.33 5077 5077 MS2 13/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.37 0.00 0 24 100 2 590.30780 1179.60832 6.66 28.96 2851 2851 MS2 16/18 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.37 0.00 0 21 25 2 639.35687 1277.70647 -2.79 40.82 4884 4884 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 261 2.37 0.00 0 19 25 2 639.35907 1277.71086 0.65 54.41 6456 6456 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.37 0.00 0 28 25 2 651.86389 1302.72051 4.08 54.02 5857 5857 MS2 18/22 Linfeng_122411_rIgG_4.raw Medium KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 2.36 0.00 1 32 100 3 615.65698 1844.95639 5.55 31.21 3064 3064 MS2 19/60 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 2.36 0.00 0 40 100 2 590.30731 1179.60735 5.83 29.63 2405 2405 MS2 15/18 Linfeng_20120125_PCAF_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 227 2.36 0.00 0 11 100 2 546.75830 1092.50932 5.87 3.07 190 190 MS2 22/26 Linfeng_20120125_PCAF_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 2.36 0.00 0 33 25 2 633.32104 1265.63481 -1.93 28.88 3284 3284 MS2 17/20 Linfeng_091311_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.36 0.00 0 30 100 2 633.32739 1265.64751 8.10 28.35 2299 2299 MS2 14/20 Linfeng_20120125_PCAF_9.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.36 0.00 1 6 100 2 670.84290 1340.67851 6.89 17.90 1256 1256 MS2 16/22 Linfeng_20120125_PCAF_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 312 2.36 0.00 0 43 25 2 639.35870 1277.71013 0.08 56.85 6536 6536 MS2 18/20 Linfeng_091311_rIgG_6.raw Medium SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 465 2.36 0.00 0 8 13 3 434.90891 1302.71216 -2.33 45.06 5424 5424 MS2 25/44 Linfeng_091311_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.36 0.00 0 57 25 2 651.86414 1302.72099 4.45 51.72 5555 5555 MS2 17/22 Linfeng_122411_rIgG_2.raw Medium WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.36 0.00 0 3 25 3 492.58585 1475.74298 -4.04 36.67 4352 4352 MS2 23/44 Linfeng_091311_rIgG_2.raw Medium SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 2.36 0.00 1 0 36 3 783.74817 2349.22995 4.87 55.26 7751 7751 MS2 24/80 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 303 2.36 0.00 0 30 25 2 639.35736 1277.70745 -2.02 40.48 4785 4785 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 288 2.36 0.00 0 12 25 2 639.36047 1277.71367 2.85 45.12 4725 4725 MS2 18/20 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 2.35 0.00 0 63 25 2 651.86334 1302.71941 3.24 56.43 5818 5818 MS2 14/22 Linfeng_122411_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.35 0.00 0 84 25 2 651.86334 1302.71941 3.24 53.13 5726 5726 MS2 16/22 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 489 2.35 0.00 0 37 25 2 651.86047 1302.71367 -1.17 45.66 5505 5505 MS2 18/22 Linfeng_091311_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 2.35 0.00 0 4 58 2 633.32697 1265.64665 7.42 29.44 2725 2725 MS2 17/20 Linfeng_20120125_PCAF_10.raw Medium LRSEIDNVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 646 2.35 0.00 1 12 25 3 358.53586 1073.59302 -1.84 18.50 1835 1835 MS2 16/32 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 2.35 0.00 0 12 100 2 651.86542 1302.72356 6.42 45.26 6330 6330 MS2 18/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.35 0.00 0 37 100 2 651.86560 1302.72392 6.70 45.24 5652 5652 MS2 19/22 Linfeng_20120125_PCAF_2.raw Medium LRSEIDNVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 632 2.35 0.00 1 36 25 3 358.53564 1073.59238 -2.44 18.69 1847 1847 MS2 16/32 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 333 2.34 0.00 0 12 25 2 639.35901 1277.71074 0.56 53.47 6470 6470 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 2.34 0.00 0 35 100 2 590.30823 1179.60918 7.38 29.66 2578 2578 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.34 0.00 0 14 25 2 639.35815 1277.70903 -0.78 44.89 5334 5334 MS2 18/20 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 2.34 0.00 0 12 100 2 633.32562 1265.64397 5.30 28.27 2687 2687 MS2 14/20 Linfeng_20120125_PCAF_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 278 2.34 0.00 0 17 100 2 692.35480 1383.70232 8.64 11.11 787 787 MS2 14/22 Linfeng_20120125_PCAF_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 2.33 0.00 0 0 100 2 633.32684 1265.64641 7.23 30.45 2906 2906 MS2 17/20 Linfeng_20120125_PCAF_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.33 0.00 0 11 99 2 633.32660 1265.64592 6.84 29.51 2421 2421 MS2 17/20 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.33 0.00 0 59 25 2 590.30365 1179.60002 -0.38 47.33 5717 5717 MS2 16/18 Linfeng_091311_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 379 2.33 0.00 0 75 100 2 633.32764 1265.64800 8.48 32.18 3731 3731 MS2 14/20 Linfeng_20120125_PCAF_8.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.33 0.00 0 72 25 3 665.32977 1993.97477 -0.98 45.80 5423 5423 MS2 24/60 Linfeng_091311_rIgG_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 228 2.33 0.00 0 27 100 2 546.75854 1092.50981 6.32 12.51 782 782 MS2 18/26 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.33 0.00 0 20 100 2 590.30811 1179.60893 7.17 30.57 2730 2730 MS2 17/18 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.33 0.00 0 41 25 2 651.86334 1302.71941 3.24 44.98 4816 4816 MS2 17/22 Linfeng_122411_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.33 0.00 0 28 100 2 692.35352 1383.69975 6.79 45.29 5832 5832 MS2 16/22 Linfeng_20120125_PCAF_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 215 2.33 0.00 0 9 100 2 546.75830 1092.50932 5.87 3.09 225 225 MS2 18/26 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 264 2.33 0.00 0 6 51 2 639.36139 1277.71550 4.28 48.67 7138 7138 MS2 17/20 Linfeng_20120125_PCAF_10.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.33 0.00 1 20 100 3 465.25165 1393.74039 5.85 27.00 1961 1961 MS2 19/44 Linfeng_20120125_PCAF_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.33 0.00 0 16 100 2 858.93597 1716.86467 7.86 35.82 4160 4160 MS2 16/28 Linfeng_20120125_PCAF_10.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.33 0.00 1 6 8 3 465.24759 1393.72821 -2.88 24.52 2686 2686 MS2 21/44 Linfeng_091311_rIgG_3.raw Medium SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 2.33 0.00 1 19 25 3 447.56024 1340.66617 -2.32 19.11 2004 2004 MS2 21/44 Linfeng_091311_rIgG_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 259 2.32 0.00 0 41 25 2 639.35974 1277.71221 1.70 52.81 6214 6214 MS2 16/20 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.32 0.00 1 6 25 2 819.93597 1638.86467 2.91 37.40 3862 3862 MS2 14/26 Linfeng_122411_rIgG_4.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.32 0.00 1 11 100 3 465.25180 1393.74085 6.18 22.39 1472 1472 MS2 19/44 Linfeng_20120125_PCAF_9.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.32 0.00 0 8 17 2 571.26392 1141.52056 0.98 4.51 501 501 MS2 13/16 Linfeng_122411_rIgG_10.raw Medium QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 2.32 0.00 0 22 100 3 572.95935 1716.86350 7.17 34.10 3743 3743 MS2 24/56 Linfeng_20120125_PCAF_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 311 2.32 0.00 0 32 25 2 639.35919 1277.71111 0.84 51.45 6234 6234 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 17 100 2 692.35400 1383.70073 7.49 10.89 744 744 MS2 16/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.32 0.00 0 42 25 2 651.86316 1302.71904 2.96 45.94 4830 4830 MS2 18/22 Linfeng_122411_rIgG_2.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 219 2.31 0.00 0 22 100 2 546.75812 1092.50896 5.54 12.48 978 978 MS2 20/26 Linfeng_20120125_PCAF_6.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.31 0.00 0 43 25 2 590.30219 1179.59709 -2.86 29.44 3396 3396 MS2 17/18 Linfeng_091311_rIgG_2.raw Medium QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 2.31 0.00 1 33 25 3 777.06439 2329.17862 1.84 36.24 3716 3716 MS2 22/80 Linfeng_122411_rIgG_4.raw Medium LRSEIDNVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 626 2.31 0.00 1 38 25 3 358.53549 1073.59192 -2.87 18.57 1882 1882 MS2 19/32 Linfeng_091311_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.31 0.00 0 70 100 2 858.93561 1716.86394 7.43 34.58 3793 3793 MS2 16/28 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 2.31 0.00 0 0 25 2 590.30847 1179.60967 7.80 54.22 6439 6439 MS2 15/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 366 2.31 0.00 2 5 8 3 436.88864 1308.65137 -2.24 18.37 1829 1829 MS2 21/36 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 363 2.31 0.00 2 4 3 3 436.88809 1308.64972 -3.50 18.40 1859 1859 MS2 21/36 Linfeng_091311_rIgG_2.raw Medium LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.31 0.00 1 19 25 3 647.99841 1941.98069 -3.62 42.06 4935 4935 MS2 22/64 Linfeng_091311_rIgG_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.31 0.00 0 31 25 2 692.34570 1383.68413 -4.50 42.13 4988 4988 MS2 16/22 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 252 2.31 0.00 0 22 100 2 829.40582 1657.80437 6.89 33.22 3255 3255 MS2 17/32 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.31 0.00 0 38 25 2 651.86346 1302.71965 3.42 50.24 4952 4952 MS2 16/22 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 2.31 0.00 0 11 100 2 590.30750 1179.60771 6.14 27.62 2212 2212 MS2 17/18 Linfeng_20120125_PCAF_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.31 0.00 0 20 100 2 633.32617 1265.64507 6.17 28.37 2359 2359 MS2 15/20 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.31 0.00 0 30 25 2 651.86206 1302.71684 1.27 53.69 5840 5840 MS2 17/22 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 415 2.30 0.00 0 12 100 2 590.30817 1179.60906 7.28 30.53 2916 2916 MS2 17/18 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 498 2.30 0.00 0 11 25 2 651.86053 1302.71379 -1.07 48.09 5738 5738 MS2 18/22 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 2.30 0.00 0 17 100 2 633.32581 1265.64433 5.59 30.69 3265 3265 MS2 15/20 Linfeng_20120125_PCAF_1.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 574 2.30 0.00 1 15 25 2 473.25266 945.49803 -2.12 2.93 274 274 MS2 13/16 Linfeng_091311_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.30 0.00 0 5 80 2 633.32660 1265.64592 6.84 30.38 2677 2677 MS2 17/20 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.30 0.00 0 13 100 2 590.30762 1179.60796 6.35 27.62 2535 2535 MS2 17/18 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.30 0.00 0 14 100 2 590.30786 1179.60845 6.76 29.94 2486 2486 MS2 17/18 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 280 2.30 0.00 0 12 25 2 639.35773 1277.70818 -1.45 49.00 5854 5854 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 2.29 0.00 0 14 100 2 590.30817 1179.60906 7.28 29.89 2619 2619 MS2 17/18 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.29 0.00 0 14 100 2 590.30768 1179.60808 6.45 27.57 2217 2217 MS2 16/18 Linfeng_20120125_PCAF_2.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.29 0.00 1 24 100 3 508.60480 1523.79984 7.31 40.52 4620 4620 MS2 20/44 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.29 0.00 0 44 25 2 651.86090 1302.71453 -0.51 49.23 5713 5713 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.29 0.00 0 41 25 2 651.86334 1302.71941 3.24 51.26 5069 5069 MS2 17/22 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 368 2.29 0.00 0 39 25 2 639.35791 1277.70854 -1.16 46.09 5489 5489 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.29 0.00 1 5 25 3 717.36603 2150.08353 2.65 41.73 4280 4280 MS2 23/64 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 2.28 0.00 0 19 100 2 590.30823 1179.60918 7.38 28.91 2627 2627 MS2 15/18 Linfeng_20120125_PCAF_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 2.28 0.00 0 38 25 2 563.27606 1125.54485 2.28 20.49 1498 1498 MS2 14/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.28 0.00 0 44 25 2 590.30591 1179.60454 3.45 52.61 5216 5216 MS2 15/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.28 0.00 0 22 100 2 590.30829 1179.60930 7.48 27.85 2111 2111 MS2 16/18 Linfeng_20120125_PCAF_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 191 2.28 0.00 0 15 25 2 546.75482 1092.50237 -0.50 6.21 522 522 MS2 18/26 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 256 2.28 0.00 0 20 25 2 639.35767 1277.70806 -1.55 51.78 6128 6128 MS2 17/20 Linfeng_091311_rIgG_6.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 2.28 0.00 1 9 25 3 465.24722 1393.72712 -3.67 24.79 2690 2690 MS2 22/44 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.28 0.00 0 55 25 2 651.86279 1302.71831 2.39 48.60 4916 4916 MS2 15/22 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.27 0.00 0 0 100 2 858.93585 1716.86443 7.72 33.52 3399 3399 MS2 17/28 Linfeng_20120125_PCAF_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 361 2.27 0.00 2 6 17 3 436.88849 1308.65091 -2.59 18.41 1822 1822 MS2 21/36 Linfeng_091311_rIgG_4.raw Medium LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.27 0.00 0 16 25 3 453.23511 1357.69077 -3.74 33.52 3941 3941 MS2 27/44 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 293 2.27 0.00 0 30 25 2 639.35992 1277.71257 1.99 53.85 6301 6301 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 369 2.27 0.00 0 16 25 2 639.35797 1277.70867 -1.07 58.32 6740 6740 MS2 18/20 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.27 0.00 0 42 25 2 651.86420 1302.72112 4.55 55.44 5513 5513 MS2 18/22 Linfeng_122411_rIgG_7.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 2.27 0.00 1 4 8 3 465.24728 1393.72730 -3.54 24.39 2402 2402 MS2 24/44 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 2.27 0.00 0 35 100 2 651.86584 1302.72441 7.08 45.12 6295 6295 MS2 17/22 Linfeng_20120125_PCAF_6.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.26 0.00 1 39 100 3 508.60455 1523.79911 6.83 40.63 4723 4723 MS2 16/44 Linfeng_20120125_PCAF_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 2.26 0.00 0 20 100 2 651.86456 1302.72185 5.11 11.02 708 708 MS2 18/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.26 0.00 0 7 100 2 590.30774 1179.60820 6.55 27.59 2401 2401 MS2 17/18 Linfeng_20120125_PCAF_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 207 2.26 0.00 0 26 100 2 546.75854 1092.50981 6.32 12.58 929 929 MS2 21/26 Linfeng_20120125_PCAF_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.26 0.00 0 55 25 2 651.86304 1302.71880 2.77 47.18 4577 4577 MS2 17/22 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 286 2.26 0.00 0 74 25 2 639.35742 1277.70757 -1.93 54.71 6487 6487 MS2 18/20 Linfeng_091311_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 463 2.25 0.00 0 18 100 2 679.35669 1357.70610 7.55 37.54 4051 4051 MS2 18/22 Linfeng_20120125_PCAF_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 2.25 0.00 0 22 100 2 633.32599 1265.64470 5.88 28.32 2528 2528 MS2 13/20 Linfeng_20120125_PCAF_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 234 2.25 0.00 0 10 100 2 563.27795 1125.54863 5.64 19.03 1232 1232 MS2 15/18 Linfeng_20120125_PCAF_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 334 2.25 0.00 0 12 100 2 858.93488 1716.86247 6.58 33.48 3939 3939 MS2 17/28 Linfeng_20120125_PCAF_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 293 2.25 0.00 0 25 25 2 639.35925 1277.71123 0.94 57.30 6896 6896 MS2 16/20 Linfeng_091311_rIgG_8.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.25 0.00 2 5 16 3 436.88831 1308.65036 -3.01 18.60 1866 1866 MS2 21/36 Linfeng_091311_rIgG_6.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.25 0.00 1 4 1 3 465.24820 1393.73005 -1.57 3.65 370 370 MS2 24/44 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 2.25 0.00 0 25 25 2 590.30615 1179.60503 3.86 54.90 5454 5454 MS2 14/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.25 0.00 0 16 100 2 590.30823 1179.60918 7.38 28.94 2633 2633 MS2 15/18 Linfeng_20120125_PCAF_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 463 2.25 0.00 0 20 100 2 738.38403 1475.76079 8.03 47.32 6822 6822 MS2 16/22 Linfeng_20120125_PCAF_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 279 2.25 0.00 0 16 25 2 639.35895 1277.71062 0.46 52.47 6357 6357 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.25 0.00 0 32 100 2 590.30780 1179.60832 6.66 29.64 2745 2745 MS2 17/18 Linfeng_20120125_PCAF_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High DVDGAYMTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 57 2.24 0.00 0 22 16 2 500.22647 999.44567 0.44 3.31 321 321 MS2 14/16 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 275 2.24 0.00 0 0 25 2 639.35962 1277.71196 1.51 56.70 6776 6776 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 302 2.24 0.00 0 23 25 2 639.35834 1277.70940 -0.50 44.99 5351 5351 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 356 2.24 0.00 0 49 25 2 639.35797 1277.70867 -1.07 47.18 5697 5697 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 301 2.23 0.00 0 23 25 2 639.35815 1277.70903 -0.78 50.01 5982 5982 MS2 18/20 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 2.23 0.00 0 25 25 2 633.32349 1265.63970 1.92 27.97 1999 1999 MS2 12/20 Linfeng_122411_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.23 0.00 0 12 25 2 651.86023 1302.71318 -1.54 45.86 5457 5457 MS2 18/22 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.23 0.00 0 22 25 2 639.35846 1277.70964 -0.30 57.44 6712 6712 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.23 0.00 0 9 100 2 590.30713 1179.60698 5.52 26.58 2284 2284 MS2 16/18 Linfeng_20120125_PCAF_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 466 2.22 0.00 0 43 25 2 651.86267 1302.71807 2.21 44.84 4689 4689 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.22 0.00 0 9 25 2 639.35962 1277.71196 1.51 57.32 6664 6664 MS2 17/20 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 666 2.22 0.00 0 10 25 2 487.27020 973.53313 1.85 20.12 1734 1734 MS2 13/14 Linfeng_122411_rIgG_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.22 0.00 0 58 100 2 692.35315 1383.69902 6.26 47.13 6082 6082 MS2 16/22 Linfeng_20120125_PCAF_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.22 0.00 0 20 100 2 590.30811 1179.60893 7.17 27.82 2679 2679 MS2 16/18 Linfeng_20120125_PCAF_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 262 2.22 0.00 0 0 25 2 639.35907 1277.71086 0.65 56.30 6588 6588 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.22 0.00 1 78 100 2 762.40320 1523.79912 6.84 40.77 4757 4757 MS2 13/22 Linfeng_20120125_PCAF_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.22 0.00 0 34 25 2 639.35944 1277.71160 1.22 52.58 6256 6256 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 277 2.21 0.00 0 31 25 2 639.36035 1277.71343 2.66 56.18 6442 6442 MS2 17/20 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.21 0.00 0 21 100 2 590.30804 1179.60881 7.07 29.90 2480 2480 MS2 17/18 Linfeng_20120125_PCAF_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 371 2.21 0.00 0 12 100 2 651.86578 1302.72429 6.98 11.33 882 882 MS2 19/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.21 0.00 0 63 100 2 590.30823 1179.60918 7.38 30.66 2943 2943 MS2 17/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 2.21 0.00 0 29 100 2 590.30817 1179.60906 7.28 30.35 2546 2546 MS2 17/18 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.21 0.00 0 21 100 2 590.30841 1179.60954 7.69 28.63 2405 2405 MS2 16/18 Linfeng_20120125_PCAF_4.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 224 2.21 0.00 0 6 100 2 563.27844 1125.54961 6.51 17.08 1082 1082 MS2 14/18 Linfeng_20120125_PCAF_3.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 2.21 0.00 1 15 100 2 697.37451 1393.74175 6.83 26.88 2264 2264 MS2 12/22 Linfeng_20120125_PCAF_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.21 0.00 0 24 25 2 639.35840 1277.70952 -0.40 51.13 6113 6113 MS2 16/20 Linfeng_091311_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.20 0.00 0 17 100 2 633.32684 1265.64641 7.23 28.38 2202 2202 MS2 14/20 Linfeng_20120125_PCAF_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 2.20 0.00 0 40 100 2 590.30713 1179.60698 5.52 28.97 2465 2465 MS2 15/18 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.20 0.00 0 10 45 2 651.86395 1302.72063 4.17 48.75 7160 7160 MS2 18/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.20 0.00 0 20 100 2 590.30780 1179.60832 6.66 27.59 2169 2169 MS2 17/18 Linfeng_20120125_PCAF_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.20 0.00 0 45 25 2 590.30524 1179.60320 2.31 50.34 4965 4965 MS2 15/18 Linfeng_122411_rIgG_7.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 499 2.19 0.00 0 44 25 2 487.26721 973.52715 -4.30 27.89 3240 3240 MS2 13/14 Linfeng_091311_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.19 0.00 0 27 100 2 651.86621 1302.72515 7.64 11.10 718 718 MS2 19/22 Linfeng_20120125_PCAF_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.19 0.00 0 37 25 2 651.86359 1302.71990 3.61 52.31 5181 5181 MS2 19/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 465 2.19 0.00 0 35 25 2 651.85864 1302.71001 -3.98 37.88 4510 4510 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.19 0.00 0 23 25 2 590.30341 1179.59953 -0.79 53.15 6432 6432 MS2 14/18 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.19 0.00 0 44 25 2 651.86346 1302.71965 3.42 50.22 5452 5452 MS2 14/22 Linfeng_122411_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 346 2.19 0.00 0 6 100 2 692.35327 1383.69927 6.44 1.53 145 145 MS2 16/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.18 0.00 0 26 100 2 651.86621 1302.72515 7.64 11.19 801 801 MS2 19/22 Linfeng_20120125_PCAF_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 2.18 0.00 0 16 100 2 651.86554 1302.72380 6.61 1.45 126 126 MS2 19/22 Linfeng_20120125_PCAF_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 2.18 0.00 1 18 100 2 762.40314 1523.79900 6.76 40.42 5602 5602 MS2 14/22 Linfeng_20120125_PCAF_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.18 0.00 0 16 25 2 590.30444 1179.60161 0.97 53.14 6336 6336 MS2 14/18 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.18 0.00 0 10 25 2 639.36121 1277.71514 3.99 52.03 6131 6131 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.18 0.00 0 20 25 2 639.35944 1277.71160 1.22 56.43 6637 6637 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 2.17 0.00 0 27 100 2 651.86591 1302.72453 7.17 45.24 5820 5820 MS2 18/22 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 319 2.17 0.00 0 29 25 2 639.35858 1277.70989 -0.11 51.12 6119 6119 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.17 0.00 0 31 25 2 651.86267 1302.71807 2.21 57.93 6665 6665 MS2 17/22 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 290 2.17 0.00 0 20 25 2 639.35767 1277.70806 -1.55 57.91 6613 6613 MS2 17/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.17 0.00 0 10 25 2 651.86066 1302.71404 -0.89 48.03 5805 5805 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 306 2.17 0.00 0 10 25 2 639.35754 1277.70781 -1.74 45.33 5363 5363 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.16 0.00 0 45 100 2 590.30768 1179.60808 6.45 28.86 2918 2918 MS2 15/18 Linfeng_20120125_PCAF_5.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 121 2.16 0.00 0 20 14 2 571.26123 1141.51518 -3.73 28.68 2982 2982 MS2 14/16 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 315 2.16 0.00 1 11 100 2 1175.11646 2349.22563 3.04 55.27 7304 7304 MS2 14/40 Linfeng_20120125_PCAF_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 2.16 0.00 0 21 100 2 692.35345 1383.69963 6.70 46.29 6087 6087 MS2 17/22 Linfeng_20120125_PCAF_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.16 0.00 0 49 100 2 590.30743 1179.60759 6.04 29.41 2538 2538 MS2 16/18 Linfeng_20120125_PCAF_2.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 124 2.16 0.00 0 47 25 2 571.26196 1141.51665 -2.45 28.76 3249 3249 MS2 13/16 Linfeng_091311_rIgG_6.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 160 2.16 0.00 0 40 25 2 571.26526 1141.52324 3.33 25.92 2230 2230 MS2 14/16 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 2.16 0.00 0 31 100 2 738.38312 1475.75896 6.79 45.55 6391 6391 MS2 16/22 Linfeng_20120125_PCAF_10.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.15 0.00 0 16 23 2 571.26349 1141.51970 0.23 25.59 2430 2430 MS2 13/16 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 296 2.15 0.00 0 49 25 2 639.35779 1277.70830 -1.36 48.47 5758 5758 MS2 15/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.15 0.00 0 29 94 2 651.86523 1302.72319 6.14 11.38 857 857 MS2 18/22 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.15 0.00 0 16 100 2 590.30750 1179.60771 6.14 27.59 2628 2628 MS2 16/18 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.14 0.00 0 19 100 2 590.30713 1179.60698 5.52 27.47 2601 2601 MS2 16/18 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.14 0.00 0 46 100 2 590.30829 1179.60930 7.48 28.09 2259 2259 MS2 14/18 Linfeng_20120125_PCAF_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.14 0.00 0 11 100 2 633.32642 1265.64556 6.55 1.50 136 136 MS2 18/20 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 2.14 0.00 0 10 100 2 633.32581 1265.64433 5.59 30.52 2575 2575 MS2 15/20 Linfeng_20120125_PCAF_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.14 0.00 0 10 100 2 692.35394 1383.70061 7.41 47.75 6924 6924 MS2 17/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.13 0.00 0 60 25 2 590.30450 1179.60173 1.07 52.06 6311 6311 MS2 15/18 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.13 0.00 0 14 25 2 651.86084 1302.71440 -0.61 49.46 5912 5912 MS2 18/22 Linfeng_091311_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.13 0.00 0 4 0 2 517.26154 1033.51579 -0.28 3.75 406 406 MS2 13/16 Linfeng_122411_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.13 0.00 0 11 15 2 679.35065 1357.69402 -1.35 4.00 406 406 MS2 15/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 2.13 0.00 0 33 100 2 651.86328 1302.71929 3.14 49.09 7234 7234 MS2 18/22 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.13 0.00 0 44 100 2 590.30768 1179.60808 6.45 29.62 2564 2564 MS2 14/18 Linfeng_20120125_PCAF_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.13 0.00 0 24 100 2 633.32642 1265.64556 6.55 28.51 2275 2275 MS2 14/20 Linfeng_20120125_PCAF_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 2.13 0.00 0 41 25 2 651.86023 1302.71318 -1.54 45.68 5259 5259 MS2 18/22 Linfeng_091311_rIgG_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 2.13 0.00 0 0 100 2 858.93335 1716.85942 4.80 2.03 191 191 MS2 12/28 Linfeng_20120125_PCAF_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 288 2.12 0.00 0 14 25 2 639.35980 1277.71233 1.80 53.20 6322 6322 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 272 2.12 0.00 0 40 25 2 639.35919 1277.71111 0.84 55.41 6551 6551 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 2.12 0.00 0 27 100 2 590.30756 1179.60784 6.24 29.14 2493 2493 MS2 15/18 Linfeng_20120125_PCAF_2.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 300 2.12 0.00 0 7 25 2 639.35687 1277.70647 -2.79 42.02 4951 4951 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.12 0.00 0 48 25 2 590.30554 1179.60381 2.83 48.00 4679 4679 MS2 15/18 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 477 2.12 0.00 0 48 25 2 651.85907 1302.71086 -3.32 37.84 4451 4451 MS2 17/22 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.12 0.00 0 61 25 2 590.30420 1179.60112 0.55 50.21 6007 6007 MS2 16/18 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 621 2.11 0.00 0 6 25 2 487.27039 973.53349 2.22 21.13 1853 1853 MS2 13/14 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.11 0.00 0 44 100 2 651.86584 1302.72441 7.08 45.14 5628 5628 MS2 18/22 Linfeng_20120125_PCAF_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.11 0.00 1 36 100 2 762.40375 1523.80022 7.56 40.64 4721 4721 MS2 14/22 Linfeng_20120125_PCAF_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 293 2.11 0.00 0 28 25 2 639.35883 1277.71037 0.27 50.99 6039 6039 MS2 16/20 Linfeng_091311_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 209 2.11 0.00 0 26 100 2 546.75842 1092.50957 6.09 12.53 901 901 MS2 20/26 Linfeng_20120125_PCAF_5.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 267 2.10 0.00 0 46 25 2 639.35687 1277.70647 -2.79 58.93 6679 6679 MS2 15/20 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 2.10 0.00 0 44 25 2 651.86383 1302.72038 3.99 55.39 5506 5506 MS2 14/22 Linfeng_122411_rIgG_7.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 2.10 0.00 0 33 25 2 517.26166 1033.51604 -0.04 4.82 545 545 MS2 13/16 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.10 0.00 0 23 100 2 590.30804 1179.60881 7.07 29.86 2575 2575 MS2 17/18 Linfeng_20120125_PCAF_9.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 4 12 2 487.26746 973.52764 -3.80 27.83 2867 2867 MS2 13/14 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 284 2.10 0.00 0 79 25 2 639.35693 1277.70659 -2.69 49.98 5932 5932 MS2 14/20 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.10 0.00 0 19 25 2 639.35889 1277.71050 0.36 48.09 5740 5740 MS2 16/20 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.09 0.00 0 38 25 2 651.86420 1302.72112 4.55 55.34 5690 5690 MS2 16/22 Linfeng_122411_rIgG_9.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 134 2.09 0.00 0 7 25 2 571.26184 1141.51641 -2.66 28.57 3235 3235 MS2 13/16 Linfeng_091311_rIgG_4.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 130 2.09 0.00 0 13 25 2 571.26196 1141.51665 -2.45 28.54 3237 3237 MS2 13/16 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.09 0.00 0 47 25 2 639.35938 1277.71147 1.13 56.89 6527 6527 MS2 15/20 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 2.09 0.00 0 28 100 2 651.86542 1302.72356 6.42 10.95 697 697 MS2 19/22 Linfeng_20120125_PCAF_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.09 0.00 0 42 100 2 590.30811 1179.60893 7.17 28.67 2876 2876 MS2 15/18 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 451 2.08 0.00 0 69 25 2 590.30365 1179.60002 -0.38 31.91 3679 3679 MS2 15/18 Linfeng_091311_rIgG_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 165 2.08 0.00 0 10 25 2 546.75305 1092.49883 -3.74 12.77 1068 1068 MS2 15/26 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 2.08 0.00 0 19 99 2 651.86517 1302.72307 6.05 2.29 268 268 MS2 19/22 Linfeng_20120125_PCAF_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 332 2.08 0.00 0 27 100 2 692.35272 1383.69817 5.64 11.16 796 796 MS2 15/22 Linfeng_20120125_PCAF_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.08 0.00 0 58 25 2 651.86371 1302.72014 3.80 50.42 5394 5394 MS2 16/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.08 0.00 0 30 100 2 590.30627 1179.60527 4.07 26.65 2396 2396 MS2 17/18 Linfeng_20120125_PCAF_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 332 2.07 0.00 0 48 100 2 692.35345 1383.69963 6.70 0.63 51 51 MS2 16/22 Linfeng_20120125_PCAF_3.raw High DVDGAYMTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 76 2.07 0.00 0 27 25 2 500.22485 999.44243 -2.79 21.83 2052 2052 MS2 12/16 Linfeng_091311_rIgG_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 2.07 0.00 1 33 100 2 762.40356 1523.79985 7.32 40.41 5152 5152 MS2 12/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.07 0.00 0 33 25 2 651.86304 1302.71880 2.77 54.61 6291 6291 MS2 16/22 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.07 0.00 0 13 100 2 651.86542 1302.72356 6.42 44.88 6674 6674 MS2 17/22 Linfeng_20120125_PCAF_1.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 507 2.07 0.00 0 6 25 2 517.26324 1033.51921 3.03 13.81 1124 1124 MS2 13/16 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 270 2.07 0.00 0 9 25 2 639.35895 1277.71062 0.46 53.39 6361 6361 MS2 18/20 Linfeng_091311_rIgG_4.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 211 2.07 0.00 0 77 25 2 563.27271 1125.53813 -3.69 21.51 2009 2009 MS2 14/18 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.07 0.00 0 18 100 2 590.30719 1179.60710 5.62 29.12 2659 2659 MS2 16/18 Linfeng_20120125_PCAF_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.07 0.00 0 19 100 2 590.29797 1179.58867 -10.00 28.93 2402 2402 MS2 15/18 Linfeng_20120125_PCAF_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.06 0.00 0 29 47 2 651.86371 1302.72014 3.80 48.64 7130 7130 MS2 19/22 Linfeng_20120125_PCAF_10.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 316 2.06 0.00 0 77 25 2 639.36060 1277.71391 3.04 56.29 6795 6795 MS2 17/20 Linfeng_091311_rIgG_8.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 295 2.06 0.00 0 49 25 2 639.35779 1277.70830 -1.36 43.56 5135 5135 MS2 17/20 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 2.06 0.00 0 40 100 2 633.32544 1265.64360 5.01 28.11 2651 2651 MS2 13/20 Linfeng_20120125_PCAF_1.raw High SEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 577 2.06 0.00 1 22 25 2 466.75525 932.50322 -1.67 14.79 1338 1338 MS2 12/14 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.06 0.00 0 10 100 2 651.86597 1302.72466 7.27 1.55 148 148 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.06 0.00 0 54 25 2 651.86328 1302.71929 3.14 52.30 6008 6008 MS2 15/22 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.06 0.00 0 29 100 2 590.30817 1179.60906 7.28 30.39 2554 2554 MS2 16/18 Linfeng_20120125_PCAF_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 2.05 0.00 0 0 100 2 633.32623 1265.64519 6.26 28.43 2563 2563 MS2 14/20 Linfeng_20120125_PCAF_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.05 0.00 0 51 25 2 590.30640 1179.60552 4.28 52.00 5655 5655 MS2 13/18 Linfeng_122411_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 2.05 0.00 0 41 100 2 633.32605 1265.64482 5.97 30.40 3281 3281 MS2 14/20 Linfeng_20120125_PCAF_5.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 628 2.05 0.00 0 5 6 2 487.27060 973.53392 2.66 23.88 1993 1993 MS2 13/14 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.05 0.00 0 13 100 2 692.35205 1383.69682 4.67 1.68 133 133 MS2 13/22 Linfeng_20120125_PCAF_5.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 134 2.05 0.00 0 30 25 2 571.26208 1141.51689 -2.23 28.78 3200 3200 MS2 12/16 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 446 2.05 0.00 0 20 100 2 651.86603 1302.72478 7.36 1.18 89 89 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.05 0.00 0 26 25 2 651.86261 1302.71794 2.11 45.26 4898 4898 MS2 17/22 Linfeng_122411_rIgG_6.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 217 2.04 0.00 0 35 25 2 533.26288 1065.51848 -2.51 20.81 2171 2171 MS2 14/16 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 319 2.04 0.00 0 27 25 2 590.30334 1179.59941 -0.90 49.87 6036 6036 MS2 13/18 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.04 0.00 0 51 25 2 590.30585 1179.60442 3.35 53.76 5330 5330 MS2 13/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.04 0.00 0 35 100 2 590.30774 1179.60820 6.55 29.76 2425 2425 MS2 15/18 Linfeng_20120125_PCAF_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 2.04 0.00 0 30 100 2 651.86530 1302.72331 6.24 45.36 5678 5678 MS2 18/22 Linfeng_20120125_PCAF_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.04 0.00 0 43 100 2 633.32703 1265.64678 7.52 28.29 2343 2343 MS2 14/20 Linfeng_20120125_PCAF_4.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 328 2.04 0.00 0 32 25 2 639.36115 1277.71501 3.90 49.09 5866 5866 MS2 16/20 Linfeng_091311_rIgG_3.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 35 2.04 0.00 0 9 100 2 650.77075 1300.53423 3.47 32.81 3889 3889 MS2 15/18 Linfeng_20120125_PCAF_8.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 658 2.03 0.00 0 31 25 2 487.27039 973.53349 2.22 19.09 1617 1617 MS2 13/14 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.03 0.00 0 26 25 2 651.86383 1302.72038 3.99 55.30 5986 5986 MS2 14/22 Linfeng_122411_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.03 0.00 0 17 25 2 517.26038 1033.51348 -2.52 22.83 2414 2414 MS2 13/16 Linfeng_091311_rIgG_9.raw High LALDLEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 1 290 2.03 0.00 0 0 25 2 639.35925 1277.71123 0.94 53.58 6373 6373 MS2 16/20 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 559 2.02 0.00 0 1 5 2 487.26843 973.52959 -1.79 4.39 464 464 MS2 12/14 Linfeng_122411_rIgG_8.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 2.02 0.00 0 4 1 2 517.26154 1033.51579 -0.28 3.39 332 332 MS2 13/16 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 380 2.02 0.00 0 6 25 2 487.26999 973.53270 1.41 26.44 2500 2500 MS2 13/14 Linfeng_122411_rIgG_6.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 528 2.01 0.00 0 10 25 2 517.26349 1033.51970 3.50 21.79 1765 1765 MS2 12/16 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 689 2.01 0.00 0 15 25 2 487.27081 973.53435 3.10 24.52 2045 2045 MS2 13/14 Linfeng_122411_rIgG_3.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.01 0.00 1 36 100 2 697.37305 1393.73882 4.73 27.17 2144 2144 MS2 10/22 Linfeng_20120125_PCAF_2.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 35 2.01 0.00 0 0 81 2 650.76862 1300.52995 0.19 32.61 3858 3858 MS2 14/18 Linfeng_20120125_PCAF_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.01 0.00 0 24 25 2 590.30402 1179.60076 0.24 51.31 6141 6141 MS2 15/18 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.01 0.00 0 11 25 2 487.26993 973.53258 1.28 22.16 1982 1982 MS2 13/14 Linfeng_122411_rIgG_5.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.01 0.00 1 42 25 2 473.25360 945.49993 -0.12 11.66 945 945 MS2 13/16 Linfeng_091311_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 484 2.00 0.00 0 58 100 2 679.35645 1357.70561 7.19 39.17 4922 4922 MS2 15/22 Linfeng_20120125_PCAF_10.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 191 2.00 0.00 0 14 25 2 546.75446 1092.50163 -1.17 14.84 1316 1316 MS2 14/26 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00021304.1;IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.00 0.00 0 39 25 2 487.26990 973.53252 1.22 25.03 2255 2255 MS2 13/14 Linfeng_122411_rIgG_4.raw IPI00220740.1 Isoform 2 of Nucleophosmin 45.66 3 8 8 42 45.16 21.51 4 14 17.97 24.53 5 5 146.42 21.13 3 23 265 29.4 4.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 8.01 0.00 1 0 100 3 1373.49976 4118.48471 7.01 27.44 2371 2371 MS2 46/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 7.55 0.00 1 0 100 3 1373.50073 4118.48764 7.72 27.33 2352 2352 MS2 44/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 7.09 0.00 2 2 100 4 1062.40015 4246.57876 6.58 24.34 1857 1857 MS2 55/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 6.99 0.00 1 0 100 3 1373.49756 4118.47812 5.41 27.77 2437 2437 MS2 47/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 6.95 0.00 1 0 100 3 1373.50073 4118.48764 7.72 27.69 2419 2419 MS2 48/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.85 0.00 2 0 100 4 1062.39880 4246.57338 5.32 24.72 1763 1763 MS2 49/216 Linfeng_20120125_PCAF_7.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 4 6.70 0.00 2 0 100 3 1416.19971 4246.58457 7.95 25.06 1960 1960 MS2 40/144 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.69 0.00 2 0 100 4 1062.40051 4246.58022 6.93 25.04 1954 1954 MS2 55/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 6.69 0.00 1 0 100 3 1373.50000 4118.48545 7.19 27.61 2404 2404 MS2 45/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.69 0.00 2 3 100 4 1062.39990 4246.57778 6.35 23.87 1805 1805 MS2 52/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 4 6.58 0.00 2 0 100 3 1416.19922 4246.58310 7.60 24.66 1897 1897 MS2 43/144 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.54 0.00 2 0 100 4 1062.40027 4246.57924 6.70 24.08 1828 1828 MS2 57/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.53 0.00 2 2 100 4 1062.39868 4246.57290 5.20 24.92 1785 1785 MS2 50/216 Linfeng_20120125_PCAF_7.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.36 0.00 2 1 100 4 1062.40076 4246.58120 7.16 24.14 1834 1834 MS2 54/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.24 0.00 2 0 100 3 1416.19739 4246.57761 6.31 24.47 1872 1872 MS2 40/144 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 6.16 0.00 2 2 100 4 1062.39661 4246.56460 3.25 23.91 1810 1810 MS2 50/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 2 5.86 0.00 1 0 100 3 1373.49890 4118.48215 6.39 27.31 2347 2347 MS2 44/140 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 4 5.86 0.00 2 0 100 4 1062.40137 4246.58364 7.73 25.35 2002 2002 MS2 52/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 4 5.82 0.00 2 0 100 4 1062.40137 4246.58364 7.73 25.27 1993 1993 MS2 52/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 4 5.71 0.00 2 100 100 4 1062.40125 4246.58315 7.62 24.78 1770 1770 MS2 52/216 Linfeng_20120125_PCAF_7.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 5.24 0.00 2 0 100 4 1062.39868 4246.57290 5.20 25.37 2005 2005 MS2 49/216 Linfeng_20120125_PCAF_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 5 4.85 0.00 2 0 100 3 1416.19312 4246.56479 3.29 25.20 1981 1981 MS2 42/144 Linfeng_20120125_PCAF_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 230 4.79 0.00 0 16 25 2 1114.10925 2227.21123 -1.97 46.51 5512 5512 MS2 24/40 Linfeng_091311_rIgG_6.raw High DELHIVEAEAMNYEGSPIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 283 4.45 0.00 0 6 23 3 715.68036 2145.02652 4.46 48.44 7104 7104 MS2 33/72 Linfeng_20120125_PCAF_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 233 4.40 0.00 0 4 25 3 607.28448 1819.83890 -2.41 45.55 5391 5391 MS2 32/52 Linfeng_091311_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 203 4.15 0.00 0 8 25 2 1114.11462 2227.22197 2.85 45.02 4868 4868 MS2 20/40 Linfeng_122411_rIgG_6.raw High ADKDYHFKVDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 145 3.99 0.00 2 5 8 5 515.44489 2573.19532 -2.45 24.73 2270 2270 MS2 53/160 Linfeng_122411_rIgG_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 269 3.95 0.00 0 5 25 3 607.28729 1819.84732 2.22 44.54 4806 4806 MS2 29/52 Linfeng_122411_rIgG_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 234 3.69 0.00 0 2 25 3 607.28516 1819.84092 -1.30 45.62 5392 5392 MS2 33/52 Linfeng_091311_rIgG_7.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 290 3.65 0.00 0 16 25 3 743.07568 2227.21250 -1.40 46.26 5481 5481 MS2 27/80 Linfeng_091311_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 277 3.60 0.00 0 24 25 3 743.07617 2227.21396 -0.74 46.37 5487 5487 MS2 29/80 Linfeng_091311_rIgG_7.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 214 3.48 0.00 0 37 25 2 910.42407 1819.84087 -1.33 45.77 5412 5412 MS2 18/26 Linfeng_091311_rIgG_7.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 156 3.38 0.00 0 0 25 2 784.86670 1568.72612 -2.47 22.79 2413 2413 MS2 19/24 Linfeng_091311_rIgG_7.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 163 3.32 0.00 0 0 22 2 784.86877 1568.73027 0.17 4.37 480 480 MS2 17/24 Linfeng_122411_rIgG_6.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 160 3.21 0.00 0 4 25 2 784.86694 1568.72661 -2.16 22.77 2437 2437 MS2 18/24 Linfeng_091311_rIgG_6.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 153 3.13 0.00 0 0 25 2 784.86694 1568.72661 -2.16 22.70 2395 2395 MS2 18/24 Linfeng_091311_rIgG_9.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 358 2.56 0.00 0 13 8 2 466.24014 931.47301 -0.15 3.81 396 396 MS2 15/16 Linfeng_122411_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 276 2.53 0.00 0 25 25 3 743.07635 2227.21451 -0.50 46.37 5487 5487 MS2 24/80 Linfeng_091311_rIgG_9.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 363 2.41 0.00 0 39 25 2 466.23917 931.47106 -2.25 20.22 2164 2164 MS2 14/16 Linfeng_091311_rIgG_10.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 378 2.38 0.00 0 58 25 2 466.23907 931.47087 -2.45 20.34 2109 2109 MS2 14/16 Linfeng_091311_rIgG_6.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 376 2.34 0.00 0 47 25 2 466.23865 931.47002 -3.36 20.31 2075 2075 MS2 14/16 Linfeng_091311_rIgG_7.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 377 2.16 0.00 0 69 25 2 466.23846 931.46965 -3.76 20.40 2151 2151 MS2 13/16 Linfeng_091311_rIgG_8.raw IPI00220833.1 Isoform UBF2 of Nucleolar transcription factor 1 15.27 3 8 8 12 25.92 13.34 7 9 8.65 5.91 3 3 727 84.9 5.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLTELILDAQEHVK Unambiguous 2 1 IPI00220833.1 CID 1.0000 0.0000 1 1 272 3.49 0.00 0 3 32 2 805.44592 1609.88457 3.07 55.24 7297 7297 MS2 20/26 Linfeng_20120125_PCAF_3.raw High RAEEIWQQSVIGDYLAR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 377 3.43 0.00 1 9 25 3 678.68341 2034.03568 -2.32 39.45 4656 4656 MS2 33/64 Linfeng_091311_rIgG_3.raw High FLESLPEEEQQR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 313 3.42 0.00 0 19 25 3 502.24634 1504.72446 -2.27 30.28 3472 3472 MS2 23/44 Linfeng_091311_rIgG_3.raw High FREDHPDLIQNAK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 301 3.30 0.00 1 7 25 3 528.26746 1582.78781 -5.99 22.79 2442 2442 MS2 28/48 Linfeng_091311_rIgG_3.raw High FSQELLSNGELNHLPLK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 353 3.05 0.00 0 19 25 3 647.01282 1939.02390 -2.34 35.90 4206 4206 MS2 23/64 Linfeng_091311_rIgG_3.raw High HPELNISEEGITK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 405 3.01 0.00 0 21 25 3 489.58615 1466.74390 -3.21 27.10 3040 3040 MS2 28/48 Linfeng_091311_rIgG_3.raw High QLQEERPELSESELTR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 337 2.85 0.00 0 8 25 3 648.65894 1943.96225 -2.42 27.32 3071 3071 MS2 27/60 Linfeng_091311_rIgG_3.raw High QLQEERPELSESELTR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 405 2.59 0.00 0 16 100 3 648.66443 1943.97873 6.06 30.33 2520 2520 MS2 20/60 Linfeng_20120125_PCAF_3.raw High FREDHPDLIQNAK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 381 2.58 0.00 1 7 100 3 528.27374 1582.80667 5.92 23.64 1547 1547 MS2 24/48 Linfeng_20120125_PCAF_3.raw High FLESLPEEEQQR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 284 2.41 0.00 0 9 25 2 752.86407 1504.72087 -4.66 30.20 3462 3462 MS2 18/22 Linfeng_091311_rIgG_3.raw High WVEISNEVR Unambiguous 2 1 IPI00220833.1 CID 1.0000 0.0000 1 1 380 2.23 0.00 0 12 25 2 566.29187 1131.57646 -2.55 29.80 3407 3407 MS2 16/16 Linfeng_091311_rIgG_3.raw High HPELNISEEGITK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 319 2.22 0.00 0 7 25 2 733.87640 1466.74553 -2.10 27.11 3042 3042 MS2 18/24 Linfeng_091311_rIgG_3.raw IPI00220834.8 X-ray repair cross-complementing protein 5 25.41 1 15 15 34 39.57 17.49 11 12 37.48 19.81 10 12 25.25 7.92 5 10 732 82.7 5.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 368 4.96 0.00 0 26 25 3 774.39630 2321.17435 2.11 49.78 5315 5315 MS2 39/84 Linfeng_122411_rIgG_3.raw High YAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 371 4.73 0.00 0 28 25 3 774.39557 2321.17215 1.16 51.23 6123 6123 MS2 41/84 Linfeng_091311_rIgG_3.raw High ETVYcLNDDDETEVLKEDIIQGFR Unambiguous 1 1 IPI00220834.8 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 158 4.66 0.00 1 3 15 3 967.78662 2901.34531 -0.23 43.56 5171 5171 MS2 28/92 Linfeng_091311_rIgG_3.raw High ETVYcLNDDDETEVLKEDIIQGFR Unambiguous 1 1 IPI00220834.8 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 4.44 0.00 1 4 25 3 967.78979 2901.35483 3.05 42.75 4412 4412 MS2 30/92 Linfeng_122411_rIgG_3.raw High KKDQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 250 4.19 0.00 2 10 23 4 625.55634 2499.20351 -3.05 24.63 2700 2700 MS2 46/126 Linfeng_091311_rIgG_3.raw High KYAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 334 4.13 0.00 1 20 25 3 817.09583 2449.27292 3.47 45.72 4799 4799 MS2 28/88 Linfeng_122411_rIgG_3.raw High LGGHGPSFPLK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 337 3.77 0.00 0 33 25 3 370.53992 1109.60520 -4.56 25.76 2856 2856 MS2 25/40 Linfeng_091311_rIgG_3.raw High EEASGSSVTAEEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 111 3.22 0.00 0 5 25 2 697.81665 1394.62602 -1.58 16.82 1609 1609 MS2 23/26 Linfeng_091311_rIgG_3.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 184 3.17 0.00 0 5 25 3 748.34692 2243.02622 2.24 29.04 2645 2645 MS2 27/76 Linfeng_122411_rIgG_3.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 183 3.11 0.00 0 31 100 3 748.34869 2243.03153 4.61 32.82 3007 3007 MS2 22/76 Linfeng_20120125_PCAF_3.raw High EEASGSSVTAEEAKK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 206 3.03 0.00 1 11 25 2 761.86462 1522.72197 -0.81 15.17 1376 1376 MS2 19/28 Linfeng_091311_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 417 2.94 0.00 0 28 25 2 659.34180 1317.67632 -2.64 32.65 3786 3786 MS2 18/20 Linfeng_091311_rIgG_3.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 337 2.94 0.00 0 20 25 2 690.84943 1380.69158 1.60 38.21 3825 3825 MS2 20/22 Linfeng_122411_rIgG_3.raw Medium KKDQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 309 2.90 0.00 2 28 100 4 625.56281 2499.22939 7.31 30.71 2583 2583 MS2 30/126 Linfeng_20120125_PCAF_3.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 331 2.87 0.00 0 23 25 2 690.84998 1380.69267 2.40 38.19 3962 3962 MS2 19/22 Linfeng_122411_rIgG_4.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 147 2.85 0.00 0 1 25 3 748.34363 2243.01633 -2.17 30.25 3469 3469 MS2 30/76 Linfeng_091311_rIgG_3.raw High KYAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 357 2.79 0.00 1 32 25 3 817.09210 2449.26175 -1.09 46.77 5574 5574 MS2 25/88 Linfeng_091311_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 378 2.77 0.00 0 18 25 2 659.34485 1317.68242 2.00 31.62 2982 2982 MS2 17/20 Linfeng_122411_rIgG_3.raw High EEASGSSVTAEEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 113 2.76 0.00 0 7 25 2 697.81677 1394.62627 -1.41 17.02 1626 1626 MS2 20/26 Linfeng_091311_rIgG_4.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 187 2.74 0.00 0 0 100 3 748.35101 2243.03849 7.71 32.80 3002 3002 MS2 24/76 Linfeng_20120125_PCAF_3.raw High DKPSGDTAAVFEEGGDVDDLLDMI Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 136 2.67 0.00 0 10 25 3 837.05103 2509.13852 3.87 51.38 5514 5514 MS2 26/92 Linfeng_122411_rIgG_3.raw Medium KKDQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 314 2.67 0.00 2 35 100 4 625.56238 2499.22768 6.62 30.78 2599 2599 MS2 32/126 Linfeng_20120125_PCAF_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 502 2.61 0.00 0 16 25 3 439.89899 1317.68241 1.99 31.63 2983 2983 MS2 23/40 Linfeng_122411_rIgG_3.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 329 2.56 0.00 0 29 25 2 690.84705 1380.68682 -1.84 39.07 4608 4608 MS2 18/22 Linfeng_091311_rIgG_3.raw High ANPQVGVAFPHIK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 308 2.53 0.00 0 6 100 2 689.39044 1377.77361 7.11 37.36 4011 4011 MS2 18/24 Linfeng_20120125_PCAF_3.raw Medium IKTLFPLIEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 63 2.50 0.00 1 3 25 3 424.93674 1272.79566 2.36 35.52 3481 3481 MS2 25/40 Linfeng_122411_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 430 2.37 0.00 0 15 100 2 659.34821 1317.68913 7.09 44.67 5680 5680 MS2 15/20 Linfeng_20120125_PCAF_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 495 2.31 0.00 0 21 100 2 659.34802 1317.68877 6.81 44.57 5657 5657 MS2 16/20 Linfeng_20120125_PCAF_3.raw High LTIGSNLSIR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 315 2.30 0.00 0 9 22 2 537.31982 1073.63237 0.92 30.88 2886 2886 MS2 17/18 Linfeng_122411_rIgG_3.raw High ANPQVGVAFPHIK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 401 2.27 0.00 0 8 100 2 689.39014 1377.77300 6.67 37.48 4037 4037 MS2 17/24 Linfeng_20120125_PCAF_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 475 2.23 0.00 0 13 100 2 659.34595 1317.68462 3.66 43.84 5476 5476 MS2 14/20 Linfeng_20120125_PCAF_3.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 341 2.11 0.00 0 21 100 2 690.85303 1380.69878 6.82 47.51 6361 6361 MS2 18/22 Linfeng_20120125_PCAF_3.raw High YGSDIVPFSK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 282 2.11 0.00 0 8 25 2 556.78558 1112.56389 1.44 29.98 2769 2769 MS2 16/18 Linfeng_122411_rIgG_3.raw High YGSDIVPFSK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 221 2.06 0.00 0 16 25 2 556.78339 1112.55950 -2.51 31.53 3638 3638 MS2 16/18 Linfeng_091311_rIgG_3.raw IPI00221106.5 Splicing factor 3B subunit 2 15.53 2 11 11 15 21.52 10.50 8 8 0.00 27.25 5.03 3 7 895 100.2 5.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAQQQAALLMQQEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 345 4.55 0.00 0 15 100 2 878.96027 1756.91326 6.90 34.69 3506 3506 MS2 21/28 Linfeng_20120125_PCAF_2.raw High LAQQQAALLMQQEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 347 4.49 0.00 0 14 100 2 878.96063 1756.91399 7.32 34.78 3523 3523 MS2 22/28 Linfeng_20120125_PCAF_2.raw High LAQQQAALLMQQEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 331 4.45 0.00 0 24 100 2 878.95966 1756.91203 6.21 34.63 3495 3495 MS2 22/28 Linfeng_20120125_PCAF_2.raw High SSLGQSASETEEDTVSVSK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 189 4.19 0.00 0 9 100 2 970.95667 1940.90605 6.63 25.20 1864 1864 MS2 20/36 Linfeng_20120125_PCAF_2.raw High LAQQQAALLMQQEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 352 3.95 0.00 0 11 100 2 878.96069 1756.91411 7.39 34.88 3540 3540 MS2 21/28 Linfeng_20120125_PCAF_2.raw High SSLGQSASETEEDTVSVSK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 181 3.59 0.00 0 14 100 2 970.95630 1940.90532 6.25 25.73 1945 1945 MS2 20/36 Linfeng_20120125_PCAF_2.raw High GIEKPPFELPDFIK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 452 3.13 0.00 0 14 25 3 543.96643 1629.88474 -2.47 40.78 4885 4885 MS2 24/52 Linfeng_091311_rIgG_2.raw Medium QQGDHSLKEHELLEQQK Unambiguous 1 1 IPI00221106.5 CID 1.0000 0.0000 1 1 347 2.92 0.00 1 15 25 4 512.50916 2047.01479 -2.73 20.02 2086 2086 MS2 24/96 Linfeng_091311_rIgG_2.raw High VGEPVALSEEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 254 2.88 0.00 0 16 25 2 657.82690 1314.64653 -5.42 25.91 2914 2914 MS2 19/22 Linfeng_091311_rIgG_2.raw High KPGDLSDELR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 402 2.81 0.00 0 24 25 3 377.19864 1129.58136 -3.08 23.89 2630 2630 MS2 24/36 Linfeng_091311_rIgG_2.raw High LTIHGDLYYEGK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 335 2.63 0.00 0 42 25 3 470.23944 1408.70377 -4.95 28.43 3258 3258 MS2 23/44 Linfeng_091311_rIgG_2.raw High LAEIGAPIQGNR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 285 2.56 0.00 0 45 25 2 619.84393 1238.68059 -3.75 27.35 3112 3112 MS2 17/22 Linfeng_091311_rIgG_2.raw High TEEEEIDR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 74 2.39 0.00 0 19 25 2 510.72617 1020.44505 -2.95 17.33 1706 1706 MS2 13/14 Linfeng_091311_rIgG_2.raw High AAVLLEQER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 474 2.20 0.00 0 3 16 2 514.78650 1028.56572 -7.60 25.33 2835 2835 MS2 14/16 Linfeng_091311_rIgG_2.raw High YGPPPSYPNLK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 486 2.03 0.00 0 17 100 2 616.82288 1232.63848 6.04 27.10 2132 2132 MS2 13/20 Linfeng_20120125_PCAF_2.raw IPI00236554.1 Isoform H14 of Myeloperoxidase 5.85 3 3 3 4 10.87 5.85 3 4 650 73.8 9.11 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FPTDQLTPDQER Unambiguous 3 1 IPI00236554.1 CID 1.0000 0.0000 1 1 233 3.06 0.00 0 7 25 2 723.84503 1446.68279 -2.23 28.44 3318 3318 MS2 18/22 Linfeng_091311_rIgG_10.raw High VGPLLAcIIGTQFR Unambiguous 3 1 IPI00236554.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 381 2.97 0.00 0 55 25 3 515.62311 1544.85477 -4.57 45.75 5573 5573 MS2 26/52 Linfeng_091311_rIgG_10.raw High VGPLLAcIIGTQFR Unambiguous 3 1 IPI00236554.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.57 0.00 0 33 25 2 772.93170 1544.85613 -3.69 45.78 5577 5577 MS2 19/26 Linfeng_091311_rIgG_10.raw High VVLEGGIDPILR Unambiguous 3 1 IPI00236554.1 CID 1.0000 0.0000 1 1 160 2.26 0.00 0 7 25 2 640.87994 1280.75261 -3.69 36.90 4446 4446 MS2 17/22 Linfeng_091311_rIgG_10.raw IPI00239815.9 Isoform 1 of Cirhin 19.83 4 10 10 18 22.47 13.56 7 8 33.84 13.70 6 10 0.00 686 76.8 8.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDGTVEIYNLSANYFQEK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 246 4.74 0.00 0 6 25 3 698.00287 2091.99405 3.37 39.83 4166 4166 MS2 39/68 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 345 4.03 0.00 0 11 25 2 988.51331 1976.01933 3.49 38.86 4045 4045 MS2 20/32 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 311 4.00 0.00 0 23 25 2 988.50690 1976.00652 -3.00 40.01 4720 4720 MS2 21/32 Linfeng_091311_rIgG_4.raw High TDGTVEIYNLSANYFQEK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 207 3.93 0.00 0 3 25 2 1046.50061 2091.99394 3.32 39.85 4168 4168 MS2 22/34 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 398 3.77 0.00 0 26 25 3 659.34473 1976.01963 3.64 38.83 4041 4041 MS2 28/64 Linfeng_122411_rIgG_4.raw High IYKPLLFMDLLDER Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 348 3.39 0.00 0 26 25 3 589.32312 1765.95481 -0.56 46.36 5519 5519 MS2 29/52 Linfeng_091311_rIgG_4.raw High ATEALcWAEGQR Unambiguous 3 1 IPI00239815.9 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 184 3.25 0.00 0 24 25 3 464.55136 1391.63953 1.61 29.38 2834 2834 MS2 24/44 Linfeng_122411_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 328 3.15 0.00 0 21 25 2 719.87720 1438.74712 3.24 38.80 4038 4038 MS2 20/24 Linfeng_122411_rIgG_4.raw High ATEALcWAEGQR Unambiguous 3 1 IPI00239815.9 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 3.01 0.00 0 22 25 2 696.32373 1391.64018 2.08 29.34 2829 2829 MS2 18/22 Linfeng_122411_rIgG_4.raw High TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 35 2.97 0.00 0 40 25 3 766.78528 2298.34128 -0.87 45.75 5444 5444 MS2 27/80 Linfeng_091311_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 330 2.95 0.00 0 28 25 2 719.87317 1438.73906 -2.36 39.92 4709 4709 MS2 20/24 Linfeng_091311_rIgG_4.raw Medium TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 34 2.84 0.00 0 31 25 4 575.34241 2298.34780 1.97 44.54 4760 4760 MS2 35/120 Linfeng_122411_rIgG_4.raw Medium TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 40 2.72 0.00 0 4 25 4 575.34064 2298.34072 -1.11 45.78 5447 5447 MS2 37/120 Linfeng_091311_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 403 2.59 0.00 0 9 25 3 480.25366 1438.74643 2.76 38.85 4043 4043 MS2 21/48 Linfeng_122411_rIgG_4.raw High VQFWDSATGTLVK Unambiguous 4 1 IPI00239815.9 CID 1.0000 0.0000 1 1 402 2.53 0.00 0 11 25 2 726.38184 1451.75640 2.36 35.66 3641 3641 MS2 14/24 Linfeng_122411_rIgG_4.raw High LFQITPDK Unambiguous 4 1 IPI00239815.9 CID 1.0000 0.0000 1 1 450 2.29 0.00 0 23 25 2 481.26987 961.53246 -3.01 30.42 3484 3484 MS2 13/14 Linfeng_091311_rIgG_4.raw High cVAYNNQSNR Unambiguous 3 1 IPI00239815.9 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.08 0.00 0 0 25 2 613.27222 1225.53716 -0.59 15.25 1374 1374 MS2 14/18 Linfeng_091311_rIgG_4.raw High FFNYVPSGIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 290 2.06 0.00 0 26 25 2 600.31000 1199.61272 -6.75 35.12 4096 4096 MS2 14/18 Linfeng_091311_rIgG_4.raw IPI00241841.10 "Keratin, type II cytoskeletal 79" 15.33 2 2 11 129 128.17 8.97 5 54 121.74 13.64 10 44 76.97 8.22 4 31 535 57.8 7.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High AEAEAWYQTK Unambiguous 3 1 IPI00241841.10 CID 1.0000 0.0000 1 1 169 3.48 0.00 0 6 7 2 598.78217 1196.55705 -1.02 3.71 358 358 MS2 16/18 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High SRAEAEAWYQTK Unambiguous 1 1 IPI00241841.10 CID 1.0000 0.0000 1 1 317 3.06 0.00 1 29 25 3 480.57010 1439.69574 3.00 22.78 1699 1699 MS2 24/44 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 187 2.47 0.00 0 3 18 2 570.27686 1139.54643 5.49 32.80 3776 3776 MS2 13/16 Linfeng_20120125_PCAF_1.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00288941.1 Nuclear receptor coactivator 5 13.30 1 4 4 5 15.14 13.30 4 5 579 65.5 9.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FDAERPVDcSVIVVNK Unambiguous 1 1 IPI00288941.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 3.53 0.00 0 21 25 3 616.64398 1847.91739 -7.96 30.29 3466 3466 MS2 31/60 Linfeng_091311_rIgG_4.raw High TQPSSQPLQSGQVLPSATPTPSAPPTSQQELQAK Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 229 3.48 0.00 0 0 25 4 872.44659 3486.76455 -1.91 31.64 3642 3642 MS2 44/198 Linfeng_091311_rIgG_4.raw High GGHPPAIQSLINLLADNR Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 333 3.08 0.00 0 11 25 3 629.34595 1886.02329 -0.57 45.30 5386 5386 MS2 25/68 Linfeng_091311_rIgG_4.raw High RKDDSYFDR Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 163 2.66 0.00 2 34 25 3 401.19019 1201.55600 -3.05 18.71 1864 1864 MS2 20/32 Linfeng_091311_rIgG_4.raw Medium GGHPPAIQSLINLLADNR Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 353 2.39 0.00 0 10 25 3 629.34521 1886.02109 -1.73 45.61 5387 5387 MS2 21/68 Linfeng_091311_rIgG_5.raw IPI00290410.3 Deoxynucleotidyltransferase terminal-interacting protein 2 15.31 2 8 8 13 20.54 12.72 7 7 19.04 11.73 6 6 0.00 810 90.6 5.97 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLSELQDTSLQQLVSQR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 392 4.55 0.00 0 4 25 3 653.67780 1959.01883 2.35 38.47 3859 3859 MS2 35/64 Linfeng_122411_rIgG_3.raw High NLSELQDTSLQQLVSQR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 428 4.26 0.00 0 6 25 3 653.67432 1959.00840 -2.98 39.28 4635 4635 MS2 32/64 Linfeng_091311_rIgG_3.raw High TIVEELLADSEFR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 388 3.01 0.00 0 53 25 3 507.93271 1521.78357 2.62 45.85 4925 4925 MS2 22/48 Linfeng_122411_rIgG_4.raw High LTSSSIDPGLSIK Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 409 2.99 0.00 0 29 25 2 659.36749 1317.72771 1.24 29.51 2706 2706 MS2 18/24 Linfeng_122411_rIgG_3.raw High SLTQTFATVEVGR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 388 2.98 0.00 0 27 25 2 704.87640 1408.74553 1.70 32.34 3076 3076 MS2 21/24 Linfeng_122411_rIgG_3.raw High LTSSSIDPGLSIK Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 375 2.96 0.00 0 17 25 2 659.36505 1317.72283 -2.47 30.91 3555 3555 MS2 20/24 Linfeng_091311_rIgG_3.raw Medium SSENILTVHEQANVESLKETK Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 299 2.89 0.00 1 34 25 4 589.80743 2356.20791 3.72 25.03 2113 2113 MS2 31/120 Linfeng_122411_rIgG_3.raw High QIVGTPVNSEDSDTR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 173 2.83 0.00 0 8 25 2 809.38690 1617.76653 -3.10 23.37 2524 2524 MS2 17/28 Linfeng_091311_rIgG_3.raw High SLTQTFATVEVGR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 373 2.74 0.00 0 26 25 2 704.87299 1408.73870 -3.15 33.46 3890 3890 MS2 20/24 Linfeng_091311_rIgG_3.raw High ASIQAASAESSGQK Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 347 2.73 0.00 0 24 25 2 667.83044 1334.65361 -0.82 17.22 1666 1666 MS2 19/26 Linfeng_091311_rIgG_3.raw High YFQIGTIVDNPADFYHSR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 321 2.62 0.00 0 7 25 3 715.01465 2143.02939 2.33 38.96 3922 3922 MS2 32/68 Linfeng_122411_rIgG_3.raw High TIVEELLADSEFR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 382 2.61 0.00 0 26 25 2 761.39380 1521.78032 0.48 46.96 5598 5598 MS2 19/24 Linfeng_091311_rIgG_3.raw Medium YFQIGTIVDNPADFYHSR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 272 2.42 0.00 0 11 25 3 715.01184 2143.02097 -1.60 39.78 4698 4698 MS2 30/68 Linfeng_091311_rIgG_3.raw IPI00291939.1 Structural maintenance of chromosomes protein 1A 16.63 3 17 17 34 15.24 5.19 6 6 47.14 10.30 11 18 26.76 6.57 6 10 1233 143.1 7.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 375 3.85 0.00 1 3 25 3 485.26544 1453.78177 2.25 27.61 2456 2456 MS2 26/44 Linfeng_122411_rIgG_3.raw High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 375 3.65 0.00 1 9 25 3 485.26529 1453.78131 1.94 27.65 2490 2490 MS2 24/44 Linfeng_122411_rIgG_2.raw High SKLESELANFGPR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 463 3.55 0.00 1 7 25 3 483.25681 1447.75586 1.26 31.22 2930 2930 MS2 29/48 Linfeng_122411_rIgG_3.raw High DKFQETSDEFEAAR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 65 3.48 0.00 1 29 25 3 558.25134 1672.73948 -3.30 27.38 3116 3116 MS2 29/52 Linfeng_091311_rIgG_2.raw High VVQLHEYSEELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 410 3.33 0.00 0 10 100 2 801.90955 1602.81182 6.73 31.47 2889 2889 MS2 19/24 Linfeng_20120125_PCAF_2.raw High SNLMDAISFVLGEK Unambiguous 3 1 IPI00291939.1 CID 1.0000 0.0000 1 1 360 3.27 0.00 0 66 25 3 508.59903 1523.78254 3.31 52.44 5638 5638 MS2 27/52 Linfeng_122411_rIgG_2.raw High VLTFDLTKYPDANPNPNEQ Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 327 3.14 0.00 1 7 25 3 726.02563 2176.06235 3.02 36.67 3627 3627 MS2 23/72 Linfeng_122411_rIgG_3.raw High DKFQETSDEFEAAR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 113 2.96 0.00 1 25 100 2 836.88129 1672.75530 6.15 27.42 2192 2192 MS2 16/26 Linfeng_20120125_PCAF_2.raw High AFVSMVYSEEGAEDR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 101 2.88 0.00 0 15 100 2 845.38092 1689.75456 7.10 39.11 4351 4351 MS2 20/28 Linfeng_20120125_PCAF_2.raw High VVQLHEYSEELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 434 2.88 0.00 0 31 100 2 801.90942 1602.81157 6.58 31.67 2928 2928 MS2 19/24 Linfeng_20120125_PCAF_2.raw High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 394 2.81 0.00 1 46 25 3 485.26260 1453.77326 -3.61 29.25 3370 3370 MS2 21/44 Linfeng_091311_rIgG_2.raw High VVQLHEYSEELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 414 2.77 0.00 0 18 100 2 801.90942 1602.81157 6.58 31.42 2881 2881 MS2 17/24 Linfeng_20120125_PCAF_2.raw High VLTFDLTKYPDANPNPNEQ Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 332 2.70 0.00 1 11 25 3 726.02539 2176.06162 2.69 36.75 3664 3664 MS2 24/72 Linfeng_122411_rIgG_2.raw High VVQLHEYSEELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 426 2.68 0.00 0 20 100 3 534.94189 1602.81113 6.30 31.68 2931 2931 MS2 19/48 Linfeng_20120125_PCAF_2.raw High AATLAQELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 677 2.59 0.00 0 36 25 2 537.29657 1073.58586 1.95 25.01 2136 2136 MS2 15/18 Linfeng_122411_rIgG_2.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 413 2.54 0.00 0 8 25 2 533.28339 1065.55950 1.82 31.93 3022 3022 MS2 15/16 Linfeng_122411_rIgG_3.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 397 2.54 0.00 0 12 25 2 533.28345 1065.55962 1.94 32.02 3065 3065 MS2 15/16 Linfeng_122411_rIgG_2.raw High DKFQETSDEFEAAR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 105 2.54 0.00 1 36 100 2 836.88080 1672.75432 5.57 27.86 2266 2266 MS2 14/26 Linfeng_20120125_PCAF_2.raw High IIDETMAQLQDLK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 470 2.40 0.00 0 28 100 2 759.40247 1517.79766 6.33 42.51 5011 5011 MS2 17/24 Linfeng_20120125_PCAF_2.raw High LNEQQSVLQR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 412 2.35 0.00 0 6 25 2 607.82520 1214.64311 -4.70 22.78 2474 2474 MS2 15/18 Linfeng_091311_rIgG_2.raw High AATLAQELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 637 2.32 0.00 0 45 25 2 537.29370 1073.58013 -3.40 28.33 3245 3245 MS2 14/18 Linfeng_091311_rIgG_2.raw High SKLESELANFGPR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 452 2.30 0.00 1 38 100 2 724.38611 1447.76494 7.53 42.82 5076 5076 MS2 18/24 Linfeng_20120125_PCAF_2.raw High FTAIIGPNGSGK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 390 2.25 0.00 0 50 25 2 581.31805 1161.62883 2.17 24.16 2027 2027 MS2 15/22 Linfeng_122411_rIgG_2.raw High AQVQLQLFK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 254 2.22 0.00 0 23 25 2 537.81976 1074.63225 1.49 33.26 3223 3223 MS2 11/16 Linfeng_122411_rIgG_2.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 393 2.22 0.00 0 29 25 2 533.28052 1065.55376 -3.56 33.30 3913 3913 MS2 15/16 Linfeng_091311_rIgG_2.raw High LIDLcQPTQK Unambiguous 2 1 IPI00291939.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 506 2.22 0.00 0 20 25 2 608.32544 1215.64360 2.77 24.28 2017 2017 MS2 13/18 Linfeng_122411_rIgG_3.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 450 2.18 0.00 0 8 25 2 531.79590 1062.58452 1.39 35.46 3473 3473 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQVQLQLFK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 263 2.14 0.00 0 20 25 2 537.82001 1074.63274 1.94 33.34 3205 3205 MS2 11/16 Linfeng_122411_rIgG_3.raw High DLTLEENQVK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 538 2.12 0.00 0 36 25 2 594.81104 1188.61479 3.43 21.97 1787 1787 MS2 14/18 Linfeng_122411_rIgG_2.raw High DLTLEENQVK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 572 2.08 0.00 0 29 25 2 594.81146 1188.61565 4.15 22.11 1767 1767 MS2 15/18 Linfeng_122411_rIgG_3.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 404 2.06 0.00 0 0 25 2 531.79285 1062.57842 -4.35 36.62 4345 4345 MS2 14/16 Linfeng_091311_rIgG_2.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 452 2.06 0.00 0 13 25 2 531.79614 1062.58501 1.85 35.45 3499 3499 MS2 14/16 Linfeng_122411_rIgG_2.raw High LIDLcQPTQK Unambiguous 2 1 IPI00291939.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 508 2.05 0.00 0 15 25 2 608.32544 1215.64360 2.77 24.01 2008 2008 MS2 13/18 Linfeng_122411_rIgG_2.raw High ELNQVMEQLGDAR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 307 2.02 0.00 0 5 100 2 751.87244 1502.73760 7.15 40.63 4639 4639 MS2 17/24 Linfeng_20120125_PCAF_2.raw IPI00292387.6 Isoform Alpha of Nucleolar and coiled-body phosphoprotein 1 8.44 2 1 4 6 17.53 8.44 4 6 0.00 699 73.6 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATGATQQDANASSLLDIYSFWLK Unambiguous 2 1 IPI00292387.6 CID 1.0000 0.0000 1 1 300 4.88 0.00 0 47 25 3 834.08435 2500.23850 1.18 51.93 6202 6202 MS2 39/88 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 124 2.87 0.00 0 5 25 3 563.33221 1687.98209 2.29 54.30 6422 6422 MS2 27/56 Linfeng_091311_rIgG_3.raw High VREEEIEVDSR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 312 2.86 0.00 1 8 25 3 454.22696 1360.66632 -2.97 20.98 2193 2193 MS2 22/40 Linfeng_091311_rIgG_3.raw Medium VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 138 2.42 0.00 0 0 25 3 563.33118 1687.97898 0.44 54.42 6457 6457 MS2 27/56 Linfeng_091311_rIgG_4.raw High DNQLSEVANK Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 286 2.37 0.00 0 18 25 2 559.27484 1117.54241 -5.40 22.13 2351 2351 MS2 13/18 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 96 2.12 0.00 0 66 25 2 844.49548 1687.98369 3.23 54.35 6428 6428 MS2 19/28 Linfeng_091311_rIgG_3.raw IPI00292771.4 Isoform 1 of Nuclear mitotic apparatus protein 1 27.57 4 45 45 79 28.60 6.19 9 10 95.72 14.89 24 27 131.96 13.95 21 42 2115 238.1 5.78 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FVLDHEDGLNLNEDLENFLQK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 293 6.03 0.00 0 3 25 3 834.74622 2502.22409 3.71 45.50 4774 4774 MS2 31/80 Linfeng_122411_rIgG_2.raw High EKQAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 367 5.36 0.00 1 1 25 3 795.08380 2383.23685 1.82 27.87 2519 2519 MS2 39/80 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 275 5.09 0.00 0 3 25 2 1097.04053 2193.07378 3.05 47.03 4969 4969 MS2 29/40 Linfeng_122411_rIgG_2.raw High LTAQVASLTSELTTLNATIQQQDQELAGLKQQAK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 110 4.94 0.00 1 2 25 4 910.99304 3640.95034 3.01 46.51 4902 4902 MS2 48/198 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 350 4.73 0.00 0 5 25 3 731.69623 2193.07413 3.21 46.92 4955 4955 MS2 34/80 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 320 4.72 0.00 0 22 25 3 731.69299 2193.06443 -1.22 47.78 5528 5528 MS2 31/80 Linfeng_091311_rIgG_1.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 151 4.55 0.00 1 0 100 2 1022.98254 2044.95781 5.83 30.94 3326 3326 MS2 28/34 Linfeng_20120125_PCAF_1.raw High QAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 377 4.46 0.00 0 9 25 3 709.37134 2126.09946 2.12 30.11 2817 2817 MS2 37/72 Linfeng_122411_rIgG_2.raw High HLcQQLQAEQAAAEK Unambiguous 3 1 IPI00292771.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 4.42 0.00 0 6 100 3 575.62158 1724.85019 6.77 22.75 1562 1562 MS2 27/56 Linfeng_20120125_PCAF_1.raw High HLcQQLQAEQAAAEK Unambiguous 3 1 IPI00292771.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 368 4.35 0.00 0 5 100 3 575.62073 1724.84763 5.28 21.73 1461 1461 MS2 27/56 Linfeng_20120125_PCAF_1.raw High AGDRQPEWLEEQQGR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 207 4.31 0.00 1 12 24 3 600.28638 1798.84458 -1.23 4.08 440 440 MS2 31/56 Linfeng_122411_rIgG_2.raw High HLcQQLQAEQAAAEK Unambiguous 3 1 IPI00292771.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 320 4.27 0.00 0 5 100 2 862.92804 1724.84880 5.96 22.92 1592 1592 MS2 21/28 Linfeng_20120125_PCAF_1.raw High LSQLEEHLSQLQDNPPQEK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 379 4.25 0.00 0 11 100 3 745.04572 2233.12259 5.82 37.91 5015 5015 MS2 31/72 Linfeng_20120125_PCAF_1.raw High AAKLEILQQQLQVANEAR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 181 4.17 0.00 1 18 25 3 675.04974 2023.13468 2.53 32.95 3183 3183 MS2 35/68 Linfeng_122411_rIgG_2.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 159 4.11 0.00 1 8 100 2 1022.98242 2044.95757 5.71 30.88 3311 3311 MS2 24/34 Linfeng_20120125_PCAF_1.raw High LTAQVASLTSELTTLNATIQQQDQELAGLK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 154 4.10 0.00 0 5 25 3 1062.57178 3185.70078 3.35 49.95 5336 5336 MS2 27/116 Linfeng_122411_rIgG_2.raw High QAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 340 4.06 0.00 0 20 100 2 1063.55713 2126.10698 5.66 34.36 4157 4157 MS2 24/36 Linfeng_20120125_PCAF_1.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 151 3.93 0.00 1 0 100 2 1022.98254 2044.95781 5.83 30.92 3321 3321 MS2 23/34 Linfeng_20120125_PCAF_1.raw High INQLSEENGDLSFK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 298 3.90 0.00 0 37 100 2 797.39612 1593.78496 5.90 33.66 3983 3983 MS2 22/26 Linfeng_20120125_PCAF_1.raw High LEILQQQLQVANEAR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 226 3.82 0.00 0 31 100 2 876.98932 1752.97136 6.28 42.53 6101 6101 MS2 22/28 Linfeng_20120125_PCAF_1.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 383 3.81 0.00 0 16 25 2 901.98175 1802.95622 3.72 48.83 5196 5196 MS2 24/30 Linfeng_122411_rIgG_2.raw High DSALETLQGQLEEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 396 3.80 0.00 0 3 68 2 780.89355 1560.77983 2.95 43.75 6398 6398 MS2 21/26 Linfeng_20120125_PCAF_1.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 174 3.79 0.00 1 12 25 3 682.32172 2044.95060 2.31 26.01 2269 2269 MS2 30/68 Linfeng_122411_rIgG_2.raw High LSQLEEHLSQLQDNPPQEK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 391 3.78 0.00 0 24 100 3 745.04626 2233.12424 6.56 37.85 5000 5000 MS2 25/72 Linfeng_20120125_PCAF_1.raw High SNRDELELELAENR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 360 3.76 0.00 1 21 25 3 563.28137 1687.82956 2.91 28.37 2587 2587 MS2 33/52 Linfeng_122411_rIgG_2.raw High LQQLGEAHQAETEVLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 371 3.73 0.00 0 16 100 2 911.48138 1821.95549 5.52 32.35 3665 3665 MS2 24/30 Linfeng_20120125_PCAF_1.raw High EKEHASGSGAQSEAAGR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 182 3.71 0.00 1 5 25 3 557.92755 1671.76810 -0.06 0.19 25 25 MS2 25/64 Linfeng_091311_rIgG_1.raw High HLcQQLQAEQAAAEK Unambiguous 3 1 IPI00292771.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 3.68 0.00 0 24 100 3 575.62061 1724.84726 5.07 23.03 1608 1608 MS2 27/56 Linfeng_20120125_PCAF_1.raw High LTAQVASLTSELTTLNATIQQQDQELAGLKQQAK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 114 3.49 0.00 1 13 25 5 728.99542 3640.94801 2.37 46.49 4900 4900 MS2 48/264 Linfeng_122411_rIgG_2.raw High VAQEKDQLQEQLQALK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 299 3.37 0.00 1 42 100 3 623.67798 1869.01938 6.25 37.25 4854 4854 MS2 27/60 Linfeng_20120125_PCAF_1.raw High IATTTASAATAAAIGATPR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 442 3.35 0.00 0 17 25 3 572.64862 1715.93131 1.50 28.56 2612 2612 MS2 30/72 Linfeng_122411_rIgG_2.raw High LQAQLNELQAQLSQK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 292 3.34 0.00 0 25 100 2 856.47699 1711.94670 7.54 41.20 5787 5787 MS2 23/28 Linfeng_20120125_PCAF_1.raw High VAQEKDQLQEQLQALK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 273 3.33 0.00 1 4 100 2 935.01361 1869.01995 6.55 37.81 4991 4991 MS2 22/30 Linfeng_20120125_PCAF_1.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 428 3.13 0.00 0 42 25 3 601.65674 1802.95566 3.41 48.86 5200 5200 MS2 30/60 Linfeng_122411_rIgG_2.raw High HLcQQLQAEQAAAEK Unambiguous 3 1 IPI00292771.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 316 3.11 0.00 0 3 100 2 862.92859 1724.84990 6.60 21.76 1464 1464 MS2 18/28 Linfeng_20120125_PCAF_1.raw High LQAQLNELQAQLSQK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 313 3.09 0.00 0 51 100 3 571.32001 1711.94547 6.82 41.31 5812 5812 MS2 21/56 Linfeng_20120125_PCAF_1.raw High TTQIINITMTK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 369 3.08 0.00 0 12 25 2 632.35345 1263.69963 1.49 30.93 2924 2924 MS2 16/20 Linfeng_122411_rIgG_2.raw High SLEAQVAHADQQLR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 398 3.05 0.00 0 17 100 2 783.41022 1565.81316 6.42 34.57 4209 4209 MS2 20/26 Linfeng_20120125_PCAF_1.raw High ELAEAMAAQHTAESEcEQLVK Unambiguous 3 1 IPI00292771.4 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 3.00 0.00 0 32 100 3 782.36816 2345.08994 6.41 38.66 5190 5190 MS2 27/80 Linfeng_20120125_PCAF_1.raw High LDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 98 2.98 0.00 0 0 100 2 958.93469 1916.86211 5.84 32.79 3774 3774 MS2 18/32 Linfeng_20120125_PCAF_1.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 178 2.98 0.00 1 25 100 3 682.32373 2044.95664 5.26 30.78 3288 3288 MS2 28/68 Linfeng_20120125_PCAF_1.raw High AQELGHSQSALASAQR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 352 2.97 0.00 0 11 21 3 551.94623 1653.82413 -3.79 2.03 262 262 MS2 23/60 Linfeng_091311_rIgG_1.raw High ASMQPIQIAEGTGITTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 351 2.93 0.00 0 45 100 2 887.46765 1773.92803 6.52 39.65 5427 5427 MS2 16/32 Linfeng_20120125_PCAF_1.raw High INQLSEENGDLSFK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 317 2.90 0.00 0 20 25 2 797.39374 1593.78020 2.91 29.58 2746 2746 MS2 19/26 Linfeng_122411_rIgG_2.raw High LADDLSTLQEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 512 2.83 0.00 0 54 25 2 616.82300 1232.63872 1.45 25.29 2173 2173 MS2 16/20 Linfeng_122411_rIgG_2.raw High VAQEKDQLQEQLQALK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 279 2.80 0.00 1 12 100 2 935.01349 1869.01970 6.42 37.88 5008 5008 MS2 18/30 Linfeng_20120125_PCAF_1.raw High VLEGSELELAK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 593 2.80 0.00 0 18 25 2 594.33044 1187.65361 1.47 28.04 2542 2542 MS2 18/20 Linfeng_122411_rIgG_2.raw High DSALETLQGQLEEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 362 2.80 0.00 0 31 100 2 780.89270 1560.77812 1.85 43.53 6344 6344 MS2 20/26 Linfeng_20120125_PCAF_1.raw High DAALKQLEALEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 487 2.78 0.00 1 15 12 3 443.58527 1328.74125 -0.63 4.67 499 499 MS2 24/44 Linfeng_122411_rIgG_9.raw High QELTSQAERAEELGQELK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 379 2.74 0.00 1 22 25 3 687.01471 2059.02958 -0.35 30.92 2923 2923 MS2 24/68 Linfeng_122411_rIgG_2.raw High LTAQVEQLEVFQR Unambiguous 2 1 IPI00292771.4 CID 1.0000 0.0000 1 1 423 2.74 0.00 0 32 100 2 780.92310 1560.83891 0.52 43.27 6279 6279 MS2 19/24 Linfeng_20120125_PCAF_1.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 417 2.73 0.00 0 9 25 3 601.65485 1802.94999 0.26 49.63 5766 5766 MS2 30/60 Linfeng_091311_rIgG_1.raw High HREELEQSK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 299 2.72 0.00 1 35 25 3 385.86246 1155.57282 -2.17 0.04 6 6 MS2 17/32 Linfeng_091311_rIgG_1.raw High IDRLALLNEK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 273 2.65 0.00 1 12 25 3 395.57224 1184.70215 1.98 26.47 2331 2331 MS2 21/36 Linfeng_122411_rIgG_2.raw High SNRDELELELAENR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 332 2.58 0.00 1 17 100 2 844.42206 1687.83684 7.22 35.38 4404 4404 MS2 16/26 Linfeng_20120125_PCAF_1.raw High VAGIESHSELQISR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 346 2.52 0.00 0 49 100 2 763.40717 1525.80705 6.61 27.83 2585 2585 MS2 18/26 Linfeng_20120125_PCAF_1.raw High DAALKQLEALEKEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 395 2.52 0.00 2 31 25 3 529.29852 1585.88102 0.86 30.57 2876 2876 MS2 23/52 Linfeng_122411_rIgG_2.raw High IHGTEEGQQILK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 348 2.51 0.00 0 46 25 3 451.57578 1352.71277 -3.06 20.08 1811 1811 MS2 25/44 Linfeng_091311_rIgG_1.raw High VAGIESHSELQISR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 367 2.51 0.00 0 33 100 3 509.27383 1525.80695 6.55 29.00 2863 2863 MS2 20/52 Linfeng_20120125_PCAF_1.raw Medium VAGIESHSELQISR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 366 2.48 0.00 0 17 100 3 509.27255 1525.80310 4.03 27.02 2391 2391 MS2 27/52 Linfeng_20120125_PCAF_1.raw High LDFVcSFLQK Unambiguous 4 1 IPI00292771.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.46 0.00 0 24 25 2 628.82269 1256.63811 2.93 40.02 4077 4077 MS2 15/18 Linfeng_122411_rIgG_2.raw High QFLEVELDQAR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 454 2.45 0.00 0 37 100 2 674.35291 1347.69853 6.06 42.54 6102 6102 MS2 17/20 Linfeng_20120125_PCAF_1.raw High VAGIESHSELQISR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 337 2.44 0.00 0 30 100 2 763.40491 1525.80254 3.65 27.12 2416 2416 MS2 18/26 Linfeng_20120125_PCAF_1.raw High LADDLSTLQEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 454 2.42 0.00 0 42 25 2 616.81958 1232.63188 -4.10 28.63 2975 2975 MS2 16/20 Linfeng_091311_rIgG_1.raw High IATTTASAATAAAIGATPR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 377 2.38 0.00 0 41 100 2 858.47327 1715.93926 6.13 32.83 3783 3783 MS2 20/36 Linfeng_20120125_PCAF_1.raw High SLEAQVAHADQQLR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 426 2.37 0.00 0 35 100 2 783.41034 1565.81340 6.57 33.95 4055 4055 MS2 19/26 Linfeng_20120125_PCAF_1.raw Medium QAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 354 2.34 0.00 0 30 100 3 709.37463 2126.10935 6.77 34.54 4200 4200 MS2 23/72 Linfeng_20120125_PCAF_1.raw High LLQAETASNSAR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 491 2.34 0.00 0 12 25 2 630.82880 1260.65032 -3.17 2.51 332 332 MS2 19/22 Linfeng_091311_rIgG_1.raw Medium VEFATLQEALAHALTEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 368 2.33 0.00 0 3 25 3 624.33374 1870.98667 -2.31 45.60 5250 5250 MS2 27/64 Linfeng_091311_rIgG_1.raw High VAQEKDQLQEQLQALK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 264 2.32 0.00 1 19 100 2 935.01361 1869.01995 6.55 37.23 4851 4851 MS2 20/30 Linfeng_20120125_PCAF_1.raw Medium LQQLGEAHQAETEVLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 405 2.32 0.00 0 20 100 3 607.98975 1821.95469 5.08 32.29 3650 3650 MS2 25/60 Linfeng_20120125_PCAF_1.raw High LADDLSTLQEK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 494 2.31 0.00 0 15 100 2 616.82532 1232.64336 5.21 26.47 2257 2257 MS2 16/20 Linfeng_20120125_PCAF_1.raw High SNRDELELELAENR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 378 2.30 0.00 1 100 100 2 844.42102 1687.83476 5.99 35.03 4321 4321 MS2 16/26 Linfeng_20120125_PCAF_1.raw Medium KINQLSEENGDLSFK Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 408 2.29 0.00 1 67 25 3 574.62982 1721.87491 2.54 24.98 2132 2132 MS2 22/56 Linfeng_122411_rIgG_2.raw High ASMQPIQIAEGTGITTR Unambiguous 4 1 IPI00292771.4 CID 1.0000 0.0000 1 1 324 2.28 0.00 0 35 100 2 887.46796 1773.92864 6.87 39.95 5494 5494 MS2 18/32 Linfeng_20120125_PCAF_1.raw High DQLQEQLQALK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 435 2.19 0.00 0 34 100 2 657.36139 1313.71550 7.22 37.84 4998 4998 MS2 15/20 Linfeng_20120125_PCAF_1.raw High IHGTEEGQQILK Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 306 2.16 0.00 0 52 25 2 676.86041 1352.71355 -2.49 20.19 1826 1826 MS2 15/22 Linfeng_091311_rIgG_1.raw High ELGELIPLR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 152 2.09 0.00 0 9 25 2 520.31042 1039.61357 -1.07 36.02 3571 3571 MS2 15/16 Linfeng_122411_rIgG_2.raw High YVQELAAVR Unambiguous 3 1 IPI00292771.4 CID 1.0000 0.0000 1 1 384 2.06 0.00 0 10 15 2 524.79175 1048.57622 -2.28 4.20 459 459 MS2 14/16 Linfeng_122411_rIgG_2.raw IPI00293078.1 Probable ATP-dependent RNA helicase DDX27 8.29 1 8 8 11 17.71 7.79 7 7 10.34 5.40 4 4 796 89.8 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EGDREAIVAALLTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 372 3.17 0.00 1 6 25 3 505.28394 1513.83725 2.56 36.79 3643 3643 MS2 22/52 Linfeng_122411_rIgG_3.raw High EAIVAALLTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 240 3.03 0.00 0 30 25 2 528.82306 1056.63884 -2.26 39.05 4605 4605 MS2 17/18 Linfeng_091311_rIgG_3.raw High DIcAcAATGTGK Unambiguous 1 1 IPI00293078.1 C3(Carbamidomethyl); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.88 0.00 0 32 25 2 612.76965 1224.53203 -2.26 20.58 2140 2140 MS2 18/22 Linfeng_091311_rIgG_3.raw High TAAFALPVLER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 420 2.87 0.00 0 14 25 2 594.34302 1187.67876 0.34 37.92 3788 3788 MS2 17/20 Linfeng_122411_rIgG_3.raw High TAAFALPVLER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 384 2.71 0.00 0 10 25 2 594.34155 1187.67583 -2.12 39.05 4606 4606 MS2 19/20 Linfeng_091311_rIgG_3.raw High GKEAVVQEPER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 334 2.71 0.00 1 25 25 3 414.55350 1241.64594 -2.07 16.64 1584 1584 MS2 16/40 Linfeng_091311_rIgG_3.raw High VLVLVPTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 16 2.20 0.00 0 39 25 2 448.79910 896.59093 -2.10 31.41 3620 3620 MS2 11/14 Linfeng_091311_rIgG_3.raw High AcIPVGLLGK Unambiguous 1 1 IPI00293078.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 2.16 0.00 0 17 25 2 514.30060 1027.59392 -2.92 33.97 3955 3955 MS2 13/18 Linfeng_091311_rIgG_3.raw High AcIPVGLLGK Unambiguous 1 1 IPI00293078.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.16 0.00 0 26 25 2 514.30328 1027.59929 2.30 32.71 3124 3124 MS2 11/18 Linfeng_122411_rIgG_3.raw High VLVLVPTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 13 2.14 0.00 0 41 25 2 448.80066 896.59404 1.37 29.64 2723 2723 MS2 11/14 Linfeng_122411_rIgG_3.raw High EAVVQEPER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 259 2.02 0.00 0 10 25 2 528.76843 1056.52959 -2.35 19.12 1934 1934 MS2 12/16 Linfeng_091311_rIgG_3.raw IPI00294229.6 RNA 3'-terminal phosphate cyclase-like protein 17.43 1 5 5 5 0.00 14.44 17.43 5 5 373 40.8 9.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DDNPGLRDFEASFIR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 283 3.41 0.00 1 26 25 3 584.61810 1751.83976 2.81 39.09 4121 4121 MS2 31/56 Linfeng_122411_rIgG_6.raw High GVTNDQVDPSVDVLK Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 380 3.21 0.00 0 0 25 2 793.40881 1585.81035 2.19 29.88 2956 2956 MS2 23/28 Linfeng_122411_rIgG_6.raw High VLLGPLSPYTIEFLR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 103 3.14 0.00 0 33 25 2 859.50067 1717.99407 3.07 47.26 5146 5146 MS2 18/28 Linfeng_122411_rIgG_6.raw High LLLEEIYR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 244 2.57 0.00 0 6 25 2 524.80646 1048.60564 1.79 36.27 3769 3769 MS2 13/14 Linfeng_122411_rIgG_6.raw High LVLSTLSGRPVK Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 113 2.10 0.00 0 7 25 2 635.39874 1269.79021 0.98 26.32 2484 2484 MS2 13/22 Linfeng_122411_rIgG_6.raw IPI00295992.4 Isoform 2 of ATPase family AAA domain-containing protein 3A 18.26 15 12 12 17 12.05 8.53 5 5 37.31 18.26 12 12 586 66.2 9.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LKEYEAAVEQLKSEQIR Unambiguous 5 1 IPI00295992.4 CID 1.0000 0.0000 1 1 309 4.35 0.00 2 18 25 4 509.27795 2034.08999 1.62 30.12 2932 2932 MS2 37/96 Linfeng_122411_rIgG_4.raw High QRYEDQLKQQQLLNEENLR Unambiguous 10 1 IPI00295992.4 CID 1.0000 0.0000 1 1 354 3.77 0.00 2 4 25 4 612.06897 2445.25405 2.41 27.56 2592 2592 MS2 38/108 Linfeng_122411_rIgG_4.raw High LKLAQFDYGR Unambiguous 11 1 IPI00295992.4 CID 1.0000 0.0000 1 1 335 3.40 0.00 1 15 25 3 404.22482 1210.65992 1.64 28.84 2763 2763 MS2 21/36 Linfeng_122411_rIgG_4.raw High YEDQLKQQQLLNEENLR Unambiguous 10 1 IPI00295992.4 CID 1.0000 0.0000 1 1 390 3.33 0.00 1 7 25 3 721.03406 2161.08762 -0.39 28.75 2752 2752 MS2 30/64 Linfeng_122411_rIgG_4.raw High ISEDLRATLNAFLYR Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 331 3.31 0.00 1 9 25 3 594.65833 1781.96042 3.31 43.17 4586 4586 MS2 28/56 Linfeng_122411_rIgG_4.raw High GLLLFVDEADAFLR Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 338 3.28 0.00 0 25 25 2 789.93365 1578.86003 4.64 51.50 5600 5600 MS2 20/26 Linfeng_122411_rIgG_4.raw High TAGTLFGEGFR Unambiguous 12 1 IPI00295992.4 CID 1.0000 0.0000 1 1 288 3.24 0.00 0 12 25 2 578.29456 1155.58183 2.14 33.02 3308 3308 MS2 19/20 Linfeng_122411_rIgG_4.raw High GLLLFVDEADAFLR Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 321 3.16 0.00 0 29 25 2 789.93085 1578.85442 1.08 53.08 6330 6330 MS2 21/26 Linfeng_091311_rIgG_4.raw High LKEYEAAVEQLK Unambiguous 5 1 IPI00295992.4 CID 1.0000 0.0000 1 1 391 3.11 0.00 1 43 25 3 474.26208 1420.77170 2.41 25.77 2354 2354 MS2 28/44 Linfeng_122411_rIgG_4.raw Medium DKWSNFDPTGLER Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 237 2.45 0.00 1 12 25 3 522.25244 1564.74277 2.33 32.53 3245 3245 MS2 25/48 Linfeng_122411_rIgG_4.raw High TAGTLFGEGFR Unambiguous 12 1 IPI00295992.4 CID 1.0000 0.0000 1 1 298 2.44 0.00 0 25 25 2 578.29175 1155.57622 -2.72 34.40 4003 4003 MS2 18/20 Linfeng_091311_rIgG_4.raw High ATLNAFLYR Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 318 2.39 0.00 0 22 25 2 534.79657 1068.58586 2.03 33.54 3374 3374 MS2 14/16 Linfeng_122411_rIgG_4.raw High ITVLEALR Unambiguous 9 1 IPI00295992.4 CID 1.0000 0.0000 1 1 190 2.35 0.00 0 11 22 2 457.78760 914.56792 1.01 33.74 3400 3400 MS2 13/14 Linfeng_122411_rIgG_4.raw High LAQFDYGR Unambiguous 11 1 IPI00295992.4 CID 1.0000 0.0000 1 1 237 2.34 0.00 0 30 25 2 485.24442 969.48155 2.75 23.13 1999 1999 MS2 13/14 Linfeng_122411_rIgG_4.raw High ITVLEALR Unambiguous 9 1 IPI00295992.4 CID 1.0000 0.0000 1 1 405 2.26 0.00 0 0 25 2 457.78397 914.56066 -6.93 35.11 4094 4094 MS2 13/14 Linfeng_091311_rIgG_4.raw High ATLNAFLYR Unambiguous 6 1 IPI00295992.4 CID 1.0000 0.0000 1 1 288 2.18 0.00 0 10 25 2 534.79413 1068.58098 -2.54 34.92 4070 4070 MS2 14/16 Linfeng_091311_rIgG_4.raw High LAQFDYGR Unambiguous 11 1 IPI00295992.4 CID 1.0000 0.0000 1 1 212 2.01 0.00 0 25 25 2 485.24164 969.47600 -2.98 26.99 3018 3018 MS2 13/14 Linfeng_091311_rIgG_4.raw IPI00297211.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 29.28 4 32 32 70 88.84 23.57 25 32 65.29 17.68 16 21 43.70 9.32 9 17 1052 121.8 8.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 82 4.35 0.00 0 0 25 2 883.89148 1766.77568 -3.29 28.12 3217 3217 MS2 22/28 Linfeng_091311_rIgG_2.raw High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 101 4.19 0.00 0 8 25 2 883.89697 1766.78667 2.92 25.11 2123 2123 MS2 21/28 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 261 4.17 0.00 0 11 25 3 618.96954 1854.89408 1.70 45.15 4723 4723 MS2 28/56 Linfeng_122411_rIgG_3.raw High LFELLEKEILFYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 285 3.96 0.00 1 19 25 3 571.66077 1712.96775 3.21 47.50 5026 5026 MS2 32/48 Linfeng_122411_rIgG_3.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 322 3.93 0.00 1 14 22 3 385.21689 1153.63611 -0.30 28.69 2599 2599 MS2 24/32 Linfeng_122411_rIgG_3.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 349 3.91 0.00 1 10 25 3 385.21594 1153.63327 -2.76 30.08 3484 3484 MS2 21/32 Linfeng_091311_rIgG_2.raw High IDEAESLNDEELEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 84 3.83 0.00 0 11 25 2 881.89453 1762.78179 -2.73 28.41 3256 3256 MS2 23/28 Linfeng_091311_rIgG_2.raw High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 105 3.65 0.00 0 21 100 2 883.89960 1766.79192 5.90 26.55 2043 2043 MS2 21/28 Linfeng_20120125_PCAF_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 194 3.48 0.00 0 16 25 2 867.40894 1733.81059 1.69 36.71 3632 3632 MS2 24/28 Linfeng_122411_rIgG_3.raw High LRLDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 222 3.47 0.00 1 3 10 3 466.61276 1397.82373 0.96 30.88 2885 2885 MS2 23/44 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 252 3.38 0.00 0 25 25 3 618.96783 1854.88895 -1.07 46.04 5553 5553 MS2 24/56 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 203 3.36 0.00 0 17 25 2 867.40906 1733.81084 1.83 32.64 3115 3115 MS2 21/28 Linfeng_122411_rIgG_3.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 384 3.33 0.00 0 19 25 2 661.34973 1321.69219 1.68 33.17 3184 3184 MS2 16/20 Linfeng_122411_rIgG_3.raw High LDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 471 3.31 0.00 0 12 25 2 564.82037 1128.63347 -3.31 27.45 3124 3124 MS2 17/18 Linfeng_091311_rIgG_2.raw High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 103 3.31 0.00 0 2 100 2 883.89966 1766.79204 5.96 26.29 2006 2006 MS2 20/28 Linfeng_20120125_PCAF_2.raw High EVEGKTPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 312 3.31 0.00 1 6 25 3 799.72638 2397.16458 1.50 43.49 4509 4509 MS2 26/76 Linfeng_122411_rIgG_3.raw High LRLDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 189 3.24 0.00 1 8 25 3 466.61057 1397.81714 -3.76 32.16 3760 3760 MS2 22/44 Linfeng_091311_rIgG_2.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 252 3.23 0.00 0 20 25 3 618.96747 1854.88785 -1.66 46.06 5485 5485 MS2 25/56 Linfeng_091311_rIgG_3.raw High IDEAESLNDEELEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 167 3.21 0.00 0 26 100 2 881.90308 1762.79888 6.96 27.71 2240 2240 MS2 22/28 Linfeng_20120125_PCAF_2.raw High RTEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 124 3.19 0.00 1 6 24 3 641.62866 1922.87143 -5.82 25.99 2925 2925 MS2 30/60 Linfeng_091311_rIgG_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 442 3.17 0.00 1 5 25 3 439.89197 1317.66135 2.05 27.12 2392 2392 MS2 25/40 Linfeng_122411_rIgG_3.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 223 3.13 0.00 0 9 25 3 578.60876 1733.81174 2.35 36.78 3641 3641 MS2 29/56 Linfeng_122411_rIgG_3.raw High LDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 481 3.04 0.00 0 45 25 2 564.82080 1128.63432 -2.55 27.46 3089 3089 MS2 16/18 Linfeng_091311_rIgG_3.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 164 3.04 0.00 0 6 19 2 867.40356 1733.79985 -4.51 37.65 4480 4480 MS2 23/28 Linfeng_091311_rIgG_2.raw High RTEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 192 3.03 0.00 1 10 100 3 641.63647 1922.89487 6.37 24.13 1741 1741 MS2 26/60 Linfeng_20120125_PCAF_2.raw High WGRDDIENIAR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 305 3.00 0.00 1 51 25 3 448.89200 1344.66144 -3.06 29.61 3419 3419 MS2 25/40 Linfeng_091311_rIgG_2.raw High WGRDDIENIAR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 351 2.99 0.00 1 50 25 3 448.89380 1344.66684 0.95 28.04 2513 2513 MS2 24/40 Linfeng_122411_rIgG_3.raw High QDSINAYNEPNSTK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 144 2.98 0.00 0 2 25 2 790.86127 1580.71526 -2.21 21.32 2268 2268 MS2 19/26 Linfeng_091311_rIgG_2.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 5 22 3 533.26788 1597.78910 2.11 32.08 3042 3042 MS2 24/48 Linfeng_122411_rIgG_3.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 404 2.82 0.00 1 18 25 3 439.88974 1317.65467 -3.02 28.98 3334 3334 MS2 22/40 Linfeng_091311_rIgG_2.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 318 2.80 0.00 1 55 25 3 385.21671 1153.63556 -0.78 28.80 2758 2758 MS2 15/32 Linfeng_122411_rIgG_4.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 416 2.80 0.00 0 27 25 2 661.34625 1321.68523 -3.58 34.25 4036 4036 MS2 16/20 Linfeng_091311_rIgG_2.raw High QDSINAYNEPNSTK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 135 2.79 0.00 0 0 25 2 790.86206 1580.71684 -1.21 21.48 2261 2261 MS2 18/26 Linfeng_091311_rIgG_3.raw High cNELQDIEK Unambiguous 4 1 IPI00297211.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 131 2.77 0.00 0 19 25 2 574.76324 1148.51921 -5.27 25.24 2822 2822 MS2 14/16 Linfeng_091311_rIgG_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 443 2.65 0.00 1 20 25 2 659.33472 1317.66216 2.66 27.14 2394 2394 MS2 16/20 Linfeng_122411_rIgG_3.raw High QNLLSVGDYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 336 2.64 0.00 0 30 25 2 582.80188 1164.59648 -3.71 31.93 3731 3731 MS2 14/18 Linfeng_091311_rIgG_2.raw High QNLLSVGDYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 337 2.62 0.00 0 19 25 2 582.80505 1164.60283 1.74 30.60 2848 2848 MS2 15/18 Linfeng_122411_rIgG_3.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 403 2.61 0.00 1 25 25 2 659.33087 1317.65447 -3.18 29.01 3337 3337 MS2 15/20 Linfeng_091311_rIgG_2.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 352 2.58 0.00 1 7 100 2 799.40277 1597.79827 7.84 41.12 4732 4732 MS2 15/24 Linfeng_20120125_PCAF_2.raw High HGATHVFASK Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 290 2.55 0.00 0 54 25 3 352.18439 1054.53861 -4.06 12.40 1021 1021 MS2 17/36 Linfeng_091311_rIgG_2.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 382 2.55 0.00 0 28 100 2 661.35364 1321.70000 7.59 42.02 4907 4907 MS2 15/20 Linfeng_20120125_PCAF_2.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 383 2.53 0.00 0 23 100 2 661.35382 1321.70036 7.87 41.76 4856 4856 MS2 16/20 Linfeng_20120125_PCAF_2.raw High RcNTLITLIER Unambiguous 1 1 IPI00297211.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 425 2.52 0.00 1 26 25 3 463.59296 1388.76432 -2.58 33.74 3970 3970 MS2 24/40 Linfeng_091311_rIgG_2.raw High VLDILEDYcMWR Unambiguous 1 1 IPI00297211.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.51 0.00 0 36 25 2 806.88086 1612.75444 2.83 45.04 4710 4710 MS2 18/22 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 254 2.51 0.00 0 23 25 3 618.96832 1854.89042 -0.28 46.29 5510 5510 MS2 19/56 Linfeng_091311_rIgG_4.raw High EIQEPDPTYEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 140 2.46 0.00 0 3 17 2 739.33844 1477.66960 0.17 3.60 361 361 MS2 16/22 Linfeng_122411_rIgG_3.raw Medium RTEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 194 2.45 0.00 1 10 100 3 641.63635 1922.89450 6.18 24.22 1750 1750 MS2 21/60 Linfeng_20120125_PCAF_2.raw High DIDILNSAGK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 567 2.42 0.00 0 22 25 2 523.27777 1045.54827 -4.02 32.24 3771 3771 MS2 16/18 Linfeng_091311_rIgG_2.raw High ANYAVDAYFR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 270 2.40 0.00 0 34 100 2 595.28967 1189.57207 7.05 38.52 4241 4241 MS2 14/18 Linfeng_20120125_PCAF_2.raw Medium NPELPNAAQAQKEEQLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 390 2.38 0.00 1 0 100 3 636.66956 1907.99411 6.23 25.79 1951 1951 MS2 23/64 Linfeng_20120125_PCAF_2.raw High TLQTISLLGYMK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 283 2.37 0.00 0 8 25 2 684.38507 1367.76286 1.84 39.99 4055 4055 MS2 18/22 Linfeng_122411_rIgG_3.raw High NPELPNAAQAQK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 329 2.35 0.00 0 12 25 2 640.83112 1280.65495 -3.47 22.27 2401 2401 MS2 18/22 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 241 2.35 0.00 0 17 100 2 867.41455 1733.82182 8.16 37.54 4058 4058 MS2 15/28 Linfeng_20120125_PCAF_2.raw Medium LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 365 2.34 0.00 1 31 100 3 533.27002 1597.79551 6.12 40.96 4701 4701 MS2 22/48 Linfeng_20120125_PCAF_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 473 2.34 0.00 1 30 100 2 659.33795 1317.66863 7.57 35.08 3580 3580 MS2 14/20 Linfeng_20120125_PCAF_2.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.29 0.00 0 10 5 2 612.29816 1223.58904 -1.04 3.99 425 425 MS2 16/18 Linfeng_122411_rIgG_3.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 505 2.29 0.00 1 28 100 2 659.33746 1317.66765 6.83 35.26 3617 3617 MS2 16/20 Linfeng_20120125_PCAF_2.raw High LDGQTPHDER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 130 2.28 0.00 0 33 25 2 584.27179 1167.53630 -2.26 13.80 1210 1210 MS2 15/18 Linfeng_091311_rIgG_2.raw Medium YKAPFHQLR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 531 2.27 0.00 1 19 24 3 387.21600 1159.63346 -3.16 20.95 2217 2217 MS2 18/32 Linfeng_091311_rIgG_2.raw High LVDQNLNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 392 2.25 0.00 0 32 25 2 472.26279 943.51830 -2.61 18.38 1830 1830 MS2 12/14 Linfeng_091311_rIgG_3.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.23 0.00 0 46 25 2 612.29456 1223.58183 -6.93 25.45 2815 2815 MS2 16/18 Linfeng_091311_rIgG_3.raw High cNTLITLIER Unambiguous 1 1 IPI00297211.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 413 2.23 0.00 0 28 25 2 616.83472 1232.66216 -3.75 38.66 4612 4612 MS2 14/18 Linfeng_091311_rIgG_2.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 356 2.22 0.00 1 18 25 2 577.32184 1153.63640 -0.05 28.76 2608 2608 MS2 12/16 Linfeng_122411_rIgG_3.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.16 0.00 0 47 21 2 612.29449 1223.58171 -7.03 25.41 2846 2846 MS2 16/18 Linfeng_091311_rIgG_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 474 2.15 0.00 1 36 100 2 659.33771 1317.66814 7.20 35.70 3702 3702 MS2 13/20 Linfeng_20120125_PCAF_2.raw High NPELPNAAQAQK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 329 2.09 0.00 0 8 25 2 640.83148 1280.65569 -2.90 22.35 2380 2380 MS2 15/22 Linfeng_091311_rIgG_3.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 351 2.07 0.00 1 27 100 2 799.40247 1597.79766 7.46 41.00 4710 4710 MS2 16/24 Linfeng_20120125_PCAF_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 195 2.06 0.00 0 5 100 2 867.41150 1733.81572 4.64 44.04 5373 5373 MS2 19/28 Linfeng_20120125_PCAF_2.raw High NYTEEEDR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 13 2.05 0.00 0 14 25 2 528.21643 1055.42558 -1.95 15.91 1507 1507 MS2 11/14 Linfeng_091311_rIgG_2.raw High EIQEPDPTYEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 118 2.02 0.00 0 2 25 2 739.33630 1477.66533 -2.72 24.15 2666 2666 MS2 17/22 Linfeng_091311_rIgG_2.raw IPI00297572.5 Intron-binding protein aquarius 3.16 1 3 3 3 0.00 9.08 3.16 3 3 1486 171.3 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDVAVQIISNIYHNFPEQR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 409 4.01 0.00 0 11 25 3 748.72009 2244.14573 2.18 46.27 4872 4872 MS2 35/72 Linfeng_122411_rIgG_2.raw High LNLQFLTLHDYLLR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 194 2.58 0.00 0 39 25 3 587.00330 1758.99533 2.94 43.47 4513 4513 MS2 24/52 Linfeng_122411_rIgG_2.raw Medium NTIQFTHTQIEAIR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 446 2.49 0.00 0 21 25 3 557.96558 1671.88218 0.49 28.76 2638 2638 MS2 21/52 Linfeng_122411_rIgG_2.raw IPI00297579.4 Chromobox protein homolog 3 37.16 1 6 6 8 14.77 21.31 5 5 13.43 30.05 3 3 183 20.8 5.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFTDADNTWEPEENLDcPELIEAFLNSQK Unambiguous 1 1 IPI00297579.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 6.08 0.00 0 1 25 3 1128.17725 3382.51719 3.38 49.89 5228 5228 MS2 34/112 Linfeng_122411_rIgG_8.raw High WKDSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 429 4.13 0.00 1 14 25 3 497.25690 1489.75614 1.85 27.50 2388 2388 MS2 36/48 Linfeng_122411_rIgG_8.raw High WKDSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 408 3.87 0.00 1 5 25 3 497.25479 1489.74982 -2.39 30.17 3420 3420 MS2 32/48 Linfeng_091311_rIgG_9.raw High VEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 252 3.50 0.00 0 24 25 2 767.36835 1533.72942 -1.67 30.77 3499 3499 MS2 20/24 Linfeng_091311_rIgG_9.raw High VEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 281 3.22 0.00 0 18 25 2 767.37152 1533.73577 2.47 28.54 2521 2521 MS2 19/24 Linfeng_122411_rIgG_8.raw High KVEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 405 2.65 0.00 1 15 25 3 554.61230 1661.82236 -2.76 27.65 3081 3081 MS2 23/52 Linfeng_091311_rIgG_9.raw High LTWHScPEDEAQ Unambiguous 1 1 IPI00297579.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 17 2.60 0.00 0 21 25 2 736.80615 1472.60503 -4.14 26.27 2891 2891 MS2 16/22 Linfeng_091311_rIgG_9.raw High DSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 359 2.14 0.00 0 24 25 2 588.29163 1175.57598 -2.65 30.28 3435 3435 MS2 17/20 Linfeng_091311_rIgG_9.raw IPI00298788.4 Isoform 1 of Interleukin enhancer-binding factor 3 31.10 9 21 21 41 48.43 24.94 16 18 31.45 8.61 8 10 36.97 13.20 7 13 894 95.3 8.76 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK Unambiguous 2 1 IPI00298788.4 CID 1.0000 0.0000 1 1 5 6.17 0.00 0 7 100 3 1085.11230 3253.32236 6.80 24.76 1668 1668 MS2 37/120 Linfeng_20120125_PCAF_3.raw High AYAALAALEKLFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 196 4.30 0.00 1 10 25 3 806.11206 2416.32163 3.84 49.90 5331 5331 MS2 35/88 Linfeng_122411_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 280 4.27 0.00 0 5 25 2 955.49835 1909.98943 1.45 34.79 3390 3390 MS2 22/34 Linfeng_122411_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 302 4.21 0.00 0 5 25 2 955.49426 1909.98125 -2.83 35.76 4188 4188 MS2 22/34 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 369 3.95 0.00 0 37 25 3 637.33179 1909.98081 -3.06 35.78 4191 4191 MS2 34/68 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 344 3.94 0.00 0 38 25 3 637.33472 1909.98960 1.54 34.76 3386 3386 MS2 33/68 Linfeng_122411_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 296 3.90 0.00 0 7 100 2 955.50330 1909.99932 6.63 41.69 4843 4843 MS2 20/34 Linfeng_20120125_PCAF_2.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 327 3.56 0.00 0 8 25 2 722.36823 1443.72917 2.11 29.65 2724 2724 MS2 23/26 Linfeng_122411_rIgG_3.raw High NTKEPPLSLTIHLTSPVVR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 154 3.50 0.00 1 13 25 4 526.30255 2102.18838 -4.06 34.18 3983 3983 MS2 39/108 Linfeng_091311_rIgG_3.raw High KQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGK Unambiguous 2 1 IPI00298788.4 CID 1.0000 0.0000 1 1 57 3.13 0.00 1 2 25 5 882.40710 4408.00642 -1.98 21.86 2315 2315 MS2 46/312 Linfeng_091311_rIgG_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 257 2.99 0.00 0 10 24 2 510.79016 1020.57305 0.56 30.90 2888 2888 MS2 17/18 Linfeng_122411_rIgG_3.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 332 2.99 0.00 0 13 25 2 722.36487 1443.72246 -2.54 31.12 3583 3583 MS2 19/26 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 305 2.99 0.00 0 36 100 2 955.50397 1910.00066 7.33 42.27 4957 4957 MS2 17/34 Linfeng_20120125_PCAF_2.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 8 100 2 955.50507 1910.00286 8.48 41.70 4965 4965 MS2 18/34 Linfeng_20120125_PCAF_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 373 2.93 0.00 0 20 25 2 510.79086 1020.57445 1.94 30.82 3022 3022 MS2 17/18 Linfeng_122411_rIgG_4.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 268 2.89 0.00 0 11 25 2 510.78827 1020.56926 -3.15 32.18 3724 3724 MS2 17/18 Linfeng_091311_rIgG_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 267 2.71 0.00 0 26 25 2 510.78802 1020.56877 -3.62 32.33 3734 3734 MS2 17/18 Linfeng_091311_rIgG_4.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 377 2.69 0.00 0 11 100 2 722.37280 1443.73833 8.45 33.56 3169 3169 MS2 15/26 Linfeng_20120125_PCAF_3.raw High LNQLKPGLQYK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 281 2.59 0.00 0 9 25 2 651.38062 1301.75395 -2.83 24.00 2612 2612 MS2 14/20 Linfeng_091311_rIgG_3.raw High GWPLELLcEK Unambiguous 9 1 IPI00298788.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 401 2.54 0.00 0 21 25 2 622.81989 1244.63249 -1.56 42.59 5049 5049 MS2 14/18 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDRQK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 353 2.51 0.00 1 14 22 3 722.71997 2166.14536 2.38 31.59 2978 2978 MS2 28/76 Linfeng_122411_rIgG_3.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 214 2.50 0.00 0 2 25 2 660.30981 1319.61235 0.68 30.20 2797 2797 MS2 16/20 Linfeng_122411_rIgG_3.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 385 2.42 0.00 0 13 100 2 722.37146 1443.73564 6.59 33.81 3463 3463 MS2 17/26 Linfeng_20120125_PCAF_4.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 368 2.36 0.00 0 0 100 2 722.37201 1443.73674 7.35 33.88 3479 3479 MS2 13/26 Linfeng_20120125_PCAF_4.raw High EATDAIGHLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 245 2.34 0.00 0 10 25 2 599.29486 1197.58245 -2.89 23.25 2506 2506 MS2 15/20 Linfeng_091311_rIgG_3.raw High cLAALASLR Unambiguous 7 1 IPI00298788.4 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 638 2.32 0.00 0 9 25 2 487.77695 974.54662 1.44 31.78 3002 3002 MS2 16/16 Linfeng_122411_rIgG_3.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 182 2.32 0.00 0 11 25 2 660.30798 1319.60869 -2.09 31.55 3640 3640 MS2 16/20 Linfeng_091311_rIgG_3.raw Medium RFVMEVEVDGQKFQGAGSNK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 365 2.30 0.00 2 42 100 3 742.70996 2226.11533 8.10 42.17 6016 6016 MS2 20/76 Linfeng_20120125_PCAF_1.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 386 2.30 0.00 0 9 100 2 722.37115 1443.73503 6.17 33.54 3280 3280 MS2 16/26 Linfeng_20120125_PCAF_2.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 248 2.30 0.00 0 14 100 2 660.31305 1319.61882 5.59 32.79 3135 3135 MS2 16/20 Linfeng_20120125_PCAF_2.raw Medium YELISETGGSHDK Unambiguous 8 1 IPI00298788.4 CID 1.0000 0.0000 1 1 201 2.28 0.00 0 26 25 3 479.22635 1435.66449 -3.84 23.57 2553 2553 MS2 21/48 Linfeng_091311_rIgG_3.raw High FNYSGSGGR Unambiguous 2 1 IPI00298788.4 CID 1.0000 0.0000 1 1 64 2.28 0.00 0 10 25 2 472.71350 944.41973 -2.52 19.19 1944 1944 MS2 12/16 Linfeng_091311_rIgG_3.raw High LFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 406 2.27 0.00 0 41 100 2 707.88770 1414.76811 7.34 45.69 5754 5754 MS2 14/24 Linfeng_20120125_PCAF_2.raw Medium RFVMEVEVDGQKFQGAGSNK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 339 2.26 0.00 2 26 22 3 742.70306 2226.09464 -1.20 35.93 4320 4320 MS2 19/76 Linfeng_091311_rIgG_10.raw High GDLDLELVLLcK Unambiguous 7 1 IPI00298788.4 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.20 0.00 0 36 25 2 694.37732 1387.74736 -2.05 44.86 5335 5335 MS2 17/22 Linfeng_091311_rIgG_3.raw High NPVMELNEK Unambiguous 8 1 IPI00298788.4 CID 1.0000 0.0000 1 1 235 2.18 0.00 0 40 25 2 537.26691 1073.52654 -2.88 25.18 2778 2778 MS2 13/16 Linfeng_091311_rIgG_3.raw High LNQLKPGLQYK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 239 2.18 0.00 0 23 100 2 651.38647 1301.76567 6.17 22.23 1433 1433 MS2 11/20 Linfeng_20120125_PCAF_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 291 2.14 0.00 0 13 100 2 955.50568 1910.00408 9.12 41.78 5483 5483 MS2 16/34 Linfeng_20120125_PCAF_6.raw High LFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 403 2.12 0.00 0 15 25 2 707.88397 1414.76067 2.08 36.36 3589 3589 MS2 18/24 Linfeng_122411_rIgG_3.raw High IFVNDDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 272 2.05 0.00 0 12 25 2 439.72098 878.43468 -2.30 22.42 2390 2390 MS2 11/12 Linfeng_091311_rIgG_3.raw High LAAFGQLHK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 340 2.01 0.00 0 8 25 2 492.78403 984.56078 -1.82 24.91 2739 2739 MS2 12/16 Linfeng_091311_rIgG_3.raw IPI00299904.3 Isoform 1 of DNA replication licensing factor MCM7 26.98 3 15 15 24 10.08 7.23 4 4 24.28 11.27 7 8 31.62 13.91 7 12 719 81.3 6.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IAQPGDHVSVTGIFLPILR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 84 4.57 0.00 0 14 25 3 678.39130 2033.15934 2.47 42.36 4484 4484 MS2 37/72 Linfeng_122411_rIgG_4.raw High SLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 189 3.59 0.00 0 36 25 3 551.65033 1652.93644 2.04 40.08 4197 4197 MS2 31/56 Linfeng_122411_rIgG_4.raw High LFADAVQELLPQYK Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 350 3.33 0.00 0 20 25 2 817.94629 1634.88530 3.91 42.97 4560 4560 MS2 19/26 Linfeng_122411_rIgG_4.raw High MVDVVEKEDVNEAIR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 402 3.12 0.00 1 23 100 2 873.44690 1745.88652 7.21 31.80 2793 2793 MS2 17/28 Linfeng_20120125_PCAF_3.raw High ALLLLLVGGVDQSPR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 66 3.03 0.00 0 2 14 2 775.96936 1550.93144 3.16 55.24 7295 7295 MS2 21/28 Linfeng_20120125_PCAF_3.raw High MVDVVEKEDVNEAIR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 408 2.96 0.00 1 15 100 2 873.44666 1745.88603 6.93 31.64 2761 2761 MS2 20/28 Linfeng_20120125_PCAF_3.raw High GNINIcLMGDPGVAK Unambiguous 2 1 IPI00299904.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 336 2.94 0.00 0 4 100 2 779.89600 1558.78472 8.35 40.79 4755 4755 MS2 16/28 Linfeng_20120125_PCAF_3.raw High SITVLVEGENTR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 553 2.86 0.00 0 17 25 2 659.35565 1317.70403 2.35 28.01 2651 2651 MS2 18/22 Linfeng_122411_rIgG_4.raw High TAIHEVMEQQTISIAK Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 318 2.84 0.00 0 43 100 2 899.97925 1798.95122 7.99 36.80 3883 3883 MS2 19/30 Linfeng_20120125_PCAF_3.raw High TQRPADVIFATVR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 425 2.79 0.00 0 8 25 3 491.94482 1473.81992 1.77 31.63 3129 3129 MS2 25/48 Linfeng_122411_rIgG_4.raw High RSLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 145 2.72 0.00 1 7 25 3 603.68604 1809.04355 5.17 39.06 4725 4725 MS2 30/60 Linfeng_091311_rIgG_10.raw High FDLLWLIQDRPDR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 429 2.69 0.00 0 10 25 3 562.96985 1686.89499 -0.78 47.15 5622 5622 MS2 22/48 Linfeng_091311_rIgG_3.raw High MVDVVEKEDVNEAIR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 452 2.69 0.00 1 17 100 3 582.63409 1745.88773 7.90 31.78 2789 2789 MS2 24/56 Linfeng_20120125_PCAF_3.raw High RSLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 124 2.64 0.00 1 11 25 3 603.68878 1809.05179 9.73 38.25 3713 3713 MS2 28/60 Linfeng_122411_rIgG_10.raw High LFADAVQELLPQYK Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 390 2.60 0.00 0 35 25 2 817.94244 1634.87761 -0.79 44.12 5240 5240 MS2 19/26 Linfeng_091311_rIgG_3.raw High GNINIcLMGDPGVAK Unambiguous 2 1 IPI00299904.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 2.58 0.00 0 24 100 2 779.89581 1558.78435 8.11 40.75 4747 4747 MS2 15/28 Linfeng_20120125_PCAF_3.raw Medium MVDVVEKEDVNEAIR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 427 2.48 0.00 1 12 100 3 582.63354 1745.88608 6.96 31.66 2765 2765 MS2 24/56 Linfeng_20120125_PCAF_3.raw High SITVLVEGENTR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 534 2.47 0.00 0 28 25 2 659.35504 1317.70281 1.42 27.89 2493 2493 MS2 17/22 Linfeng_122411_rIgG_3.raw Medium EVVNKDVLDVYIEHR Unambiguous 1 1 IPI00299904.3 CID 1.0000 0.0000 1 1 409 2.33 0.00 1 43 100 3 609.99628 1827.97428 7.80 42.61 5178 5178 MS2 25/56 Linfeng_20120125_PCAF_3.raw Medium MQEHSDQVPVGNIPR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 374 2.28 0.00 0 0 100 3 569.61841 1706.84067 7.45 24.23 1603 1603 MS2 19/56 Linfeng_20120125_PCAF_3.raw High ALLLLLVGGVDQSPR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 69 2.23 0.00 0 13 100 2 775.96954 1550.93181 3.40 55.27 7585 7585 MS2 19/28 Linfeng_20120125_PCAF_4.raw High SQLLSYIDR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 343 2.15 0.00 0 43 100 2 547.79987 1094.59245 7.65 40.90 4780 4780 MS2 14/16 Linfeng_20120125_PCAF_3.raw High SQLLSYIDR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 369 2.07 0.00 0 41 25 2 547.79407 1094.58086 -2.94 33.59 3907 3907 MS2 13/16 Linfeng_091311_rIgG_3.raw High TLLAILR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 92 2.01 0.00 0 14 25 2 400.27432 799.54137 1.66 35.65 3640 3640 MS2 11/12 Linfeng_122411_rIgG_4.raw IPI00300078.6 Periodic tryptophan protein 2 homolog 17.95 1 11 11 22 34.17 14.80 9 11 23.21 10.23 6 7 10.18 4.35 3 4 919 102.4 6.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADLLQREEEEEEEEDQEGDRETTIR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 74 5.88 0.00 2 2 25 4 762.84528 3048.35927 2.59 28.14 2525 2525 MS2 44/144 Linfeng_122411_rIgG_3.raw High ADLLQREEEEEEEEDQEGDRETTIR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 68 4.98 0.00 2 9 25 4 762.84247 3048.34804 -1.09 28.76 3267 3267 MS2 39/144 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 322 3.85 0.00 0 10 25 2 896.96283 1792.91838 3.74 44.71 4667 4667 MS2 23/30 Linfeng_122411_rIgG_3.raw High GEIEVVTSSLPELYVEK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 322 3.77 0.00 0 33 25 2 946.49615 1891.98503 -2.62 41.31 4891 4891 MS2 20/32 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 341 3.72 0.00 0 29 25 2 896.95892 1792.91057 -0.62 45.84 5457 5457 MS2 22/30 Linfeng_091311_rIgG_3.raw High GNLNFTcDGNSVISPVGNR Unambiguous 1 1 IPI00300078.6 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 225 3.66 0.00 0 0 100 2 1010.98505 2020.96282 6.04 38.21 4196 4196 MS2 21/36 Linfeng_20120125_PCAF_3.raw High GNLNFTcDGNSVISPVGNR Unambiguous 1 1 IPI00300078.6 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 3.65 0.00 0 21 25 3 674.32275 2020.95371 1.54 32.65 3116 3116 MS2 30/72 Linfeng_122411_rIgG_3.raw High cWAATTTEGLLIYSLDTR Unambiguous 1 1 IPI00300078.6 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 308 3.35 0.00 0 28 25 3 691.01001 2071.01548 -0.52 45.53 5419 5419 MS2 26/68 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 388 3.15 0.00 0 12 25 3 598.30817 1792.90995 -0.97 45.85 5458 5458 MS2 34/60 Linfeng_091311_rIgG_3.raw High WDNLIYYALGGHK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 399 2.96 0.00 0 1 25 3 517.26392 1549.77719 -1.70 41.60 4927 4927 MS2 26/48 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 392 2.88 0.00 0 6 25 3 598.31042 1792.91672 2.81 44.69 4665 4665 MS2 32/60 Linfeng_122411_rIgG_3.raw High GSVHSVSFSPDGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 230 2.78 0.00 0 29 25 3 444.54810 1331.62973 -3.14 23.09 2484 2484 MS2 20/48 Linfeng_091311_rIgG_3.raw High AGTLLPVIQFLQK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 65 2.56 0.00 0 20 25 2 714.43726 1427.86724 3.57 45.51 4771 4771 MS2 18/24 Linfeng_122411_rIgG_3.raw High GEIEVVTSSLPELYVEK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 353 2.53 0.00 0 6 25 3 631.33350 1891.98594 -2.14 41.36 4896 4896 MS2 25/64 Linfeng_091311_rIgG_3.raw High AGTLLPVIQFLQK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 114 2.42 0.00 0 28 25 2 714.43396 1427.86064 -1.04 46.73 5569 5569 MS2 17/24 Linfeng_091311_rIgG_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 215 2.33 0.00 0 27 25 2 612.84924 1224.69121 -2.88 31.72 3664 3664 MS2 19/20 Linfeng_091311_rIgG_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 203 2.28 0.00 0 12 100 2 612.85541 1224.70354 7.19 36.28 3767 3767 MS2 18/20 Linfeng_20120125_PCAF_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 225 2.20 0.00 0 16 25 2 612.85162 1224.69597 1.01 30.62 2851 2851 MS2 18/20 Linfeng_122411_rIgG_3.raw High SVLASASWDK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 479 2.19 0.00 0 23 25 2 532.27570 1063.54411 2.08 25.76 2210 2210 MS2 14/18 Linfeng_122411_rIgG_3.raw High SVLASASWDK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 398 2.18 0.00 0 7 25 2 532.27325 1063.53923 -2.51 28.46 3225 3225 MS2 14/18 Linfeng_091311_rIgG_3.raw High FSNLLGTVYR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 300 2.13 0.00 0 27 100 2 585.32336 1169.63945 6.91 44.58 5660 5660 MS2 15/18 Linfeng_20120125_PCAF_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 201 2.11 0.00 0 13 100 2 612.85553 1224.70378 7.39 36.24 3760 3760 MS2 17/20 Linfeng_20120125_PCAF_3.raw IPI00300127.3 N-acetyltransferase 10 29.07 2 19 19 36 60.45 21.37 15 20 29.86 13.76 8 10 16.02 7.32 5 6 1025 115.6 8.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFDALQYQEHLDYEIIQSLNPEFNK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 236 4.65 0.00 0 15 25 3 1004.48767 3011.44846 2.06 49.71 6015 6015 MS2 36/96 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 38 4.60 0.00 0 6 25 3 720.42969 2159.27451 2.69 48.71 5179 5179 MS2 34/80 Linfeng_122411_rIgG_3.raw High TLTDEDEADQGGWLAAFWK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 162 4.52 0.00 0 37 25 3 718.33185 2152.98099 -0.61 48.79 5900 5900 MS2 32/72 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 34 4.13 0.00 0 30 25 2 1080.13684 2159.26641 -1.07 50.12 6069 6069 MS2 23/40 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 40 4.05 0.00 0 5 25 3 720.42743 2159.26773 -0.45 50.16 6073 6073 MS2 37/80 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 40 3.77 0.00 0 17 25 3 720.42773 2159.26865 -0.03 50.05 5986 5986 MS2 31/80 Linfeng_091311_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 379 3.52 0.00 0 56 25 2 875.44312 1749.87895 -1.00 51.55 6246 6246 MS2 23/28 Linfeng_091311_rIgG_2.raw High IVSGcPLPEAcELYYVNR Unambiguous 2 1 IPI00300127.3 C5(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 3.48 0.00 0 0 100 2 1070.51904 2140.03081 4.93 44.28 5430 5430 MS2 22/34 Linfeng_20120125_PCAF_2.raw High IVSGcPLPEAcELYYVNR Unambiguous 2 1 IPI00300127.3 C5(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 286 3.39 0.00 0 12 25 3 714.01117 2140.01896 -0.60 36.15 3563 3563 MS2 27/68 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 387 3.23 0.00 0 17 25 2 875.44635 1749.88542 2.69 50.25 5375 5375 MS2 18/28 Linfeng_122411_rIgG_3.raw High EELEALFLPYDLK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 382 3.23 0.00 0 45 25 2 790.41547 1579.82366 -1.15 46.56 5618 5618 MS2 20/24 Linfeng_091311_rIgG_2.raw High QQSAQSQVSTTAENK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 226 3.16 0.00 0 4 25 2 803.88593 1606.76457 -1.37 16.86 1642 1642 MS2 19/28 Linfeng_091311_rIgG_2.raw High EELEALFLPYDLK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 390 3.12 0.00 0 39 25 2 790.41870 1579.83013 2.95 45.42 4759 4759 MS2 19/24 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 426 3.11 0.00 0 39 25 3 583.96667 1749.88547 2.72 50.23 5372 5372 MS2 25/56 Linfeng_122411_rIgG_3.raw High ESLQDTQPVGVLVDccK Unambiguous 2 1 IPI00300127.3 C15(Carbamidomethyl); C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 3.07 0.00 0 0 100 2 974.46765 1947.92803 6.62 37.78 4099 4099 MS2 21/32 Linfeng_20120125_PCAF_2.raw High WLNDLLcLDcLNITR Unambiguous 2 1 IPI00300127.3 C7(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 2.81 0.00 0 41 25 3 640.32153 1918.95005 -0.73 48.86 5909 5909 MS2 25/56 Linfeng_091311_rIgG_2.raw High IAVHPDYQGMGYGSR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 228 2.81 0.00 0 39 100 3 550.93085 1650.77799 5.23 28.10 2314 2314 MS2 24/56 Linfeng_20120125_PCAF_2.raw High TLHEVSLQESIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 382 2.73 0.00 0 14 23 3 471.25372 1411.74662 -5.25 26.79 3034 3034 MS2 21/44 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 38 2.71 0.00 0 17 25 3 720.42999 2159.27542 3.11 48.64 5270 5270 MS2 26/80 Linfeng_122411_rIgG_4.raw High IVSGcPLPEAcELYYVNR Unambiguous 2 1 IPI00300127.3 C5(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 206 2.68 0.00 0 8 25 2 1070.50977 2140.01225 -3.74 37.12 4411 4411 MS2 17/34 Linfeng_091311_rIgG_2.raw High ESLQDTQPVGVLVDccK Unambiguous 2 1 IPI00300127.3 C15(Carbamidomethyl); C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.68 0.00 0 22 25 2 974.45862 1947.90996 -2.65 33.64 3957 3957 MS2 17/32 Linfeng_091311_rIgG_2.raw High SLFVVVGDR Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 360 2.67 0.00 0 37 25 2 496.28348 991.55968 2.54 33.05 3168 3168 MS2 15/16 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 427 2.58 0.00 0 0 25 3 583.96539 1749.88163 0.52 51.46 6235 6235 MS2 23/56 Linfeng_091311_rIgG_2.raw High SLFVVVGDR Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 269 2.55 0.00 0 12 25 2 496.28061 991.55394 -3.25 34.56 4077 4077 MS2 14/16 Linfeng_091311_rIgG_2.raw High ESLQDTQPVGVLVDccK Unambiguous 2 1 IPI00300127.3 C15(Carbamidomethyl); C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 226 2.46 0.00 0 12 100 2 974.46887 1947.93047 7.87 37.53 4056 4056 MS2 18/32 Linfeng_20120125_PCAF_2.raw Medium ASGDLIPWTVSEQFQDPDFGGLSGGR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 213 2.42 0.00 0 14 25 3 912.77032 2736.29642 2.29 45.39 4755 4755 MS2 30/100 Linfeng_122411_rIgG_3.raw Medium TLHEVSLQESIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 355 2.40 0.00 0 21 25 3 471.25464 1411.74936 -3.30 26.76 2995 2995 MS2 19/44 Linfeng_091311_rIgG_3.raw High LDYLGVSYGLTPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 366 2.39 0.00 0 28 25 2 727.38617 1453.76506 -2.43 38.21 4554 4554 MS2 21/24 Linfeng_091311_rIgG_2.raw High QQSAQSQVSTTAENK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 211 2.37 0.00 0 16 25 2 803.88635 1606.76543 -0.84 16.71 1594 1594 MS2 16/28 Linfeng_091311_rIgG_3.raw Medium VLETPQEIHTVSSEAVSLLEEVITPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 198 2.32 0.00 0 4 25 3 959.51837 2876.54056 5.32 53.51 5769 5769 MS2 19/100 Linfeng_122411_rIgG_3.raw High LDYLGVSYGLTPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 386 2.29 0.00 0 21 25 2 727.38867 1453.77007 1.01 37.20 3695 3695 MS2 17/24 Linfeng_122411_rIgG_3.raw High LDYLGVSYGLTPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 367 2.15 0.00 0 28 100 2 727.39368 1453.78008 7.89 45.89 5800 5800 MS2 16/24 Linfeng_20120125_PCAF_2.raw High LFNEVQEK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 330 2.14 0.00 0 18 25 2 503.76236 1006.51744 -2.97 24.15 2667 2667 MS2 11/14 Linfeng_091311_rIgG_2.raw High QSILNSLSR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 600 2.08 0.00 0 29 25 2 509.28656 1017.56584 -2.88 30.59 3552 3552 MS2 12/16 Linfeng_091311_rIgG_2.raw High GDDEEWNEVLNK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 109 2.05 0.00 0 38 100 2 724.32544 1447.64360 6.87 35.88 3739 3739 MS2 16/22 Linfeng_20120125_PCAF_2.raw High ILIENGVAER Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 405 2.01 0.00 0 20 25 2 557.31244 1113.61760 -7.82 26.51 2995 2995 MS2 16/18 Linfeng_091311_rIgG_2.raw IPI00300371.5 Isoform 1 of Splicing factor 3B subunit 3 13.15 2 13 13 25 20.41 5.92 6 8 31.14 7.89 8 11 15.40 4.03 4 6 1217 135.5 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HIANYISGIQTIGHR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 377 4.22 0.00 0 9 25 3 560.63806 1679.89963 1.17 28.54 2578 2578 MS2 37/56 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 338 4.07 0.00 0 5 25 3 603.63330 1808.88535 2.17 38.99 3926 3926 MS2 28/56 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 243 3.72 0.00 0 15 25 2 904.94208 1808.87688 -2.51 39.86 4768 4768 MS2 22/28 Linfeng_091311_rIgG_2.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 290 3.27 0.00 0 15 25 2 904.94604 1808.88481 1.88 39.01 3929 3929 MS2 19/28 Linfeng_122411_rIgG_3.raw High MQGQEAVLAMSSR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 273 3.21 0.00 0 3 100 2 704.34430 1407.68132 6.64 29.91 2614 2614 MS2 21/24 Linfeng_20120125_PCAF_2.raw High LGAVFNQVAFPLQYTPR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 353 3.12 0.00 0 15 25 3 641.01453 1921.02903 -2.13 42.89 5088 5088 MS2 31/64 Linfeng_091311_rIgG_3.raw High FLAVGLVDNTVR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 311 2.86 0.00 0 10 25 2 652.37274 1303.73821 0.98 35.63 3496 3496 MS2 20/22 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 308 2.84 0.00 0 22 25 3 603.63000 1808.87546 -3.29 39.88 4770 4770 MS2 26/56 Linfeng_091311_rIgG_2.raw High TPVEEVPAAIAPFQGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 265 2.83 0.00 0 23 100 2 841.45575 1681.90422 7.93 42.72 5202 5202 MS2 17/30 Linfeng_20120125_PCAF_3.raw High SVAGGFVYTYK Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 445 2.73 0.00 0 29 25 2 596.30762 1191.60796 2.92 29.22 2668 2668 MS2 17/20 Linfeng_122411_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 371 2.67 0.00 0 7 25 2 744.88165 1488.75603 1.29 31.34 2946 2946 MS2 22/26 Linfeng_122411_rIgG_3.raw High FLAVGLVDNTVR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 266 2.54 0.00 0 17 100 2 652.37653 1303.74578 6.78 47.37 6329 6329 MS2 20/22 Linfeng_20120125_PCAF_3.raw High IVILEYQPSK Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 237 2.52 0.00 0 19 25 2 595.34576 1189.68425 1.27 30.93 2893 2893 MS2 15/18 Linfeng_122411_rIgG_3.raw High TPVEEVPAAIAPFQGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 276 2.45 0.00 0 18 100 2 841.45441 1681.90154 6.33 42.53 5016 5016 MS2 22/30 Linfeng_20120125_PCAF_2.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 351 2.43 0.00 0 28 25 2 744.87811 1488.74895 -3.46 32.76 3840 3840 MS2 22/26 Linfeng_091311_rIgG_2.raw High DYIVVGSDSGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 239 2.34 0.00 0 17 25 2 584.28754 1167.56780 3.17 21.08 1660 1660 MS2 17/20 Linfeng_122411_rIgG_3.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 304 2.19 0.00 0 16 100 2 482.75797 964.50865 5.50 27.60 2221 2221 MS2 13/14 Linfeng_20120125_PCAF_2.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 401 2.19 0.00 0 29 25 2 744.88275 1488.75823 2.77 31.45 2991 2991 MS2 21/26 Linfeng_122411_rIgG_2.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 357 2.19 0.00 0 41 25 2 744.87848 1488.74968 -2.97 32.68 3790 3790 MS2 22/26 Linfeng_091311_rIgG_3.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 268 2.17 0.00 0 28 100 2 482.75848 964.50969 6.58 27.89 2274 2274 MS2 14/14 Linfeng_20120125_PCAF_2.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 2.17 0.00 0 35 25 2 482.75635 964.50542 2.15 25.63 2193 2193 MS2 13/14 Linfeng_122411_rIgG_3.raw High DYIVVGSDSGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 240 2.10 0.00 0 13 25 2 584.28748 1167.56767 3.07 20.07 1565 1565 MS2 14/20 Linfeng_122411_rIgG_3.raw High NFGDQPDIR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 193 2.06 0.00 0 28 25 2 531.25287 1061.49846 -2.49 25.03 2791 2791 MS2 13/16 Linfeng_091311_rIgG_2.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.03 0.00 0 13 25 2 482.75354 964.49980 -3.67 28.52 3271 3271 MS2 13/14 Linfeng_091311_rIgG_2.raw High RNDLDDPER Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 122 2.03 0.00 1 15 25 2 565.26459 1129.52190 -1.24 16.64 1610 1610 MS2 12/16 Linfeng_091311_rIgG_2.raw IPI00301323.1 ATP-dependent RNA helicase DDX18 29.10 3 13 13 20 30.19 18.51 8 11 17.22 10.60 6 6 8.73 6.87 3 3 670 75.4 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 299 3.62 0.00 0 13 25 2 723.35797 1445.70867 2.28 32.96 3299 3299 MS2 19/22 Linfeng_122411_rIgG_4.raw High ANATVDGLEQGYVVcPSEK Unambiguous 1 1 IPI00301323.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 234 3.61 0.00 0 4 100 2 1018.99054 2036.97380 7.05 34.68 3416 3416 MS2 23/36 Linfeng_20120125_PCAF_3.raw High QIFNVNNLNLPQVALSFGFK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 256 3.57 0.00 0 29 25 3 755.07843 2263.22074 -1.20 51.49 6162 6162 MS2 34/76 Linfeng_091311_rIgG_4.raw High GLDIPEVDWIVQYDPPDDPKEYIHR Unambiguous 3 1 IPI00301323.1 CID 1.0000 0.0000 1 1 229 3.52 0.00 1 7 25 4 753.12097 3009.46206 -0.31 44.13 5239 5239 MS2 44/144 Linfeng_091311_rIgG_4.raw High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 3.27 0.00 0 12 25 2 723.35345 1445.69963 -3.97 34.14 3969 3969 MS2 19/22 Linfeng_091311_rIgG_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 563 3.08 0.00 0 23 25 2 580.81152 1160.61577 -0.02 4.61 541 541 MS2 16/18 Linfeng_122411_rIgG_4.raw High NGTGVLILSPTR Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 398 3.05 0.00 0 42 25 2 614.35736 1227.70745 1.49 30.49 2979 2979 MS2 18/22 Linfeng_122411_rIgG_4.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 245 2.75 0.00 0 12 25 2 721.35571 1441.70415 2.97 40.36 4232 4232 MS2 19/22 Linfeng_122411_rIgG_4.raw Medium YHYELLNYIDLPVLAIHGK Unambiguous 3 1 IPI00301323.1 CID 1.0000 0.0000 1 1 329 2.73 0.00 0 0 25 4 568.55896 2271.21401 -1.44 45.16 5369 5369 MS2 36/108 Linfeng_091311_rIgG_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 491 2.71 0.00 0 7 25 2 580.80957 1160.61186 -3.38 26.28 2920 2920 MS2 16/18 Linfeng_091311_rIgG_4.raw High LGNGINIIVATPGR Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 145 2.69 0.00 0 10 25 2 697.91046 1394.81365 1.54 33.25 3337 3337 MS2 20/26 Linfeng_122411_rIgG_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 476 2.62 0.00 0 33 25 2 580.80957 1160.61186 -3.38 26.47 2920 2920 MS2 16/18 Linfeng_091311_rIgG_9.raw High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 336 2.61 0.00 0 40 100 2 723.36188 1445.71648 7.68 40.95 4791 4791 MS2 19/22 Linfeng_20120125_PCAF_3.raw Medium GHALLILRPEELGFLR Unambiguous 3 1 IPI00301323.1 CID 1.0000 0.0000 1 1 94 2.56 0.00 0 3 25 4 459.27219 1834.06692 -1.61 39.59 4667 4667 MS2 38/90 Linfeng_091311_rIgG_4.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 211 2.51 0.00 0 19 25 2 721.35248 1441.69768 -1.52 41.49 4908 4908 MS2 19/22 Linfeng_091311_rIgG_4.raw High VPPFVDLNVNSNEGK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 329 2.51 0.00 0 21 100 2 814.92377 1628.84026 7.56 42.23 5086 5086 MS2 15/28 Linfeng_20120125_PCAF_3.raw High GGGGGFGYQK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 105 2.45 0.00 0 18 25 2 464.21820 927.42912 -3.05 19.55 1983 1983 MS2 13/18 Linfeng_091311_rIgG_4.raw High GGGGGFGYQK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 103 2.18 0.00 0 23 25 2 464.21799 927.42870 -3.51 19.87 1996 1996 MS2 12/18 Linfeng_091311_rIgG_9.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 210 2.07 0.00 0 23 25 2 721.35229 1441.69731 -1.77 41.75 4907 4907 MS2 19/22 Linfeng_091311_rIgG_9.raw High ILDVGFEEELK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 421 2.03 0.00 0 24 25 2 646.34351 1291.67974 1.28 36.03 3689 3689 MS2 16/20 Linfeng_122411_rIgG_4.raw IPI00302238.3 Protein AATF 13.93 1 6 6 9 16.04 9.46 3 5 10.27 7.68 4 4 560 63.1 4.94 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 193 3.70 0.00 0 23 25 2 1021.56860 2042.12993 -1.10 46.60 5552 5552 MS2 18/34 Linfeng_091311_rIgG_3.raw High SLVGLQEELLFQYPDTR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 373 3.49 0.00 0 15 25 2 1004.52032 2008.03337 -2.63 44.91 5337 5337 MS2 17/32 Linfeng_091311_rIgG_4.raw High DLDEEIFDDDDFYHQLLR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 95 3.39 0.00 0 21 25 3 766.67749 2298.01792 -0.82 46.40 5527 5527 MS2 33/68 Linfeng_091311_rIgG_3.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 168 3.34 0.00 0 14 25 2 1021.57355 2042.13982 3.74 45.18 4840 4840 MS2 17/34 Linfeng_122411_rIgG_4.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 235 2.93 0.00 0 19 25 3 681.38141 2042.12967 -1.23 46.58 5549 5549 MS2 26/68 Linfeng_091311_rIgG_3.raw High GGPEFSSALK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 422 2.54 0.00 0 38 25 2 496.75708 992.50688 2.11 21.30 1787 1787 MS2 13/18 Linfeng_122411_rIgG_4.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 268 2.53 0.00 0 15 25 3 681.37872 2042.12162 -5.17 46.63 5553 5553 MS2 29/68 Linfeng_091311_rIgG_4.raw High FADFTVYR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 372 2.28 0.00 0 27 25 2 509.75439 1018.50151 2.18 31.79 3149 3149 MS2 13/14 Linfeng_122411_rIgG_4.raw High GFGAFER Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 175 2.10 0.00 0 47 25 2 392.19370 783.38011 2.11 24.45 2177 2177 MS2 10/12 Linfeng_122411_rIgG_4.raw IPI00303813.5 Nucleolar protein 11 23.37 1 13 13 21 28.09 18.50 10 10 30.89 16.13 9 11 0.00 719 81.1 6.07 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DVQLLQLcLQQFPDIPESVTcAcLK Unambiguous 1 1 IPI00303813.5 C8(Carbamidomethyl); C21(Carbamidomethyl); C23(Carbamidomethyl) CID 1.0000 0.0000 1 1 259 5.00 0.00 0 13 25 3 992.49384 2975.46695 -0.23 49.66 5938 5938 MS2 41/96 Linfeng_091311_rIgG_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 349 3.61 0.00 0 7 25 2 796.93237 1592.85747 2.76 35.55 3628 3628 MS2 23/26 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 124 3.48 0.00 0 16 25 3 515.30927 1543.91324 2.44 40.42 4240 4240 MS2 32/52 Linfeng_122411_rIgG_4.raw High QTPDFHTVIGDTVTGLLER Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 380 3.36 0.00 0 5 25 3 700.36639 2099.08463 3.71 45.21 4844 4844 MS2 32/72 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 114 3.19 0.00 0 27 25 2 772.45947 1543.91167 1.42 40.38 4235 4235 MS2 21/26 Linfeng_122411_rIgG_4.raw High QTPDFHTVIGDTVTGLLER Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 385 3.04 0.00 0 25 25 3 700.36328 2099.07529 -0.74 46.42 5526 5526 MS2 33/72 Linfeng_091311_rIgG_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 355 2.99 0.00 0 15 25 2 796.92749 1592.84770 -3.37 36.64 4293 4293 MS2 22/26 Linfeng_091311_rIgG_4.raw High IETVISDEEVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 485 2.99 0.00 0 11 25 2 687.87323 1374.73918 2.08 30.58 2991 2991 MS2 18/22 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 318 2.96 0.00 0 33 25 3 428.23831 1282.70038 0.13 34.36 3480 3480 MS2 27/44 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 152 2.79 0.00 0 14 25 2 772.45636 1543.90544 -2.62 41.77 4942 4942 MS2 20/26 Linfeng_091311_rIgG_4.raw High ATLSAEVYR Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 217 2.74 0.00 0 12 25 2 505.26831 1009.52934 -1.96 25.13 2765 2765 MS2 15/16 Linfeng_091311_rIgG_4.raw High IETVISDEEVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 466 2.68 0.00 0 40 25 2 687.87030 1374.73332 -2.18 31.89 3676 3676 MS2 17/22 Linfeng_091311_rIgG_4.raw High IWNNEDVNLDK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 213 2.67 0.00 0 4 25 2 680.32892 1359.65056 -2.52 29.00 3293 3293 MS2 18/20 Linfeng_091311_rIgG_4.raw High IWNNEDVNLDK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 249 2.48 0.00 0 20 25 2 680.33246 1359.65764 2.69 27.23 2548 2548 MS2 18/20 Linfeng_122411_rIgG_4.raw High TDQFLVTDSGR Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 234 2.34 0.00 0 68 25 2 619.80591 1238.60454 2.69 25.82 2361 2361 MS2 16/20 Linfeng_122411_rIgG_4.raw High cEVSSLAGALGK Unambiguous 1 1 IPI00303813.5 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 485 2.19 0.00 0 17 25 2 596.30640 1191.60552 1.39 29.67 2872 2872 MS2 19/22 Linfeng_122411_rIgG_4.raw High SQISVYSELNK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 383 2.16 0.00 0 9 25 2 634.33130 1267.65532 1.92 27.57 2593 2593 MS2 17/20 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 346 2.14 0.00 0 0 25 2 641.85315 1282.69902 -0.93 34.31 3473 3473 MS2 18/22 Linfeng_122411_rIgG_4.raw High HPVLIFITEK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 177 2.10 0.00 0 42 25 2 598.85352 1196.69975 -3.40 33.65 3905 3905 MS2 12/18 Linfeng_091311_rIgG_4.raw High FQTLQTSK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 221 2.04 0.00 0 8 25 2 476.75726 952.50725 -2.73 20.89 2173 2173 MS2 11/14 Linfeng_091311_rIgG_4.raw High SQISVYSELNK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 345 2.04 0.00 0 27 25 2 634.32867 1267.65007 -2.22 29.35 3339 3339 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00304187.8 RNA-binding protein 28 19.50 4 12 12 17 27.90 16.60 11 11 19.06 10.67 6 6 0.00 759 85.7 9.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLSFDSEEEELGELLQQFGELK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 237 5.45 0.00 0 2 25 3 852.08142 2554.22971 3.94 54.65 5892 5892 MS2 37/84 Linfeng_122411_rIgG_3.raw High SEQLEELFSQVGPVK Unambiguous 3 1 IPI00304187.8 CID 1.0000 0.0000 1 1 411 4.25 0.00 0 5 25 3 563.96252 1689.87302 2.10 40.10 4069 4069 MS2 32/56 Linfeng_122411_rIgG_3.raw High SEQLEELFSQVGPVK Unambiguous 3 1 IPI00304187.8 CID 1.0000 0.0000 1 1 412 3.48 0.00 0 5 25 3 563.96002 1689.86551 -2.34 41.04 4855 4855 MS2 33/56 Linfeng_091311_rIgG_3.raw High AEVEQVELPDGK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 304 3.36 0.00 0 21 25 2 657.33118 1313.65508 -2.54 27.98 3161 3161 MS2 17/22 Linfeng_091311_rIgG_3.raw High DTQSVSAIGEEK Unambiguous 4 1 IPI00304187.8 CID 1.0000 0.0000 1 1 256 2.72 0.00 0 30 25 2 632.30414 1263.60100 -4.24 22.15 2354 2354 MS2 19/22 Linfeng_091311_rIgG_3.raw High cLLAASPENEAGGLK Unambiguous 3 1 IPI00304187.8 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.69 0.00 0 18 25 2 765.38708 1529.76689 2.61 28.08 2517 2517 MS2 17/28 Linfeng_122411_rIgG_3.raw High cLLAASPENEAGGLK Unambiguous 3 1 IPI00304187.8 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.63 0.00 0 10 25 2 765.38354 1529.75981 -2.02 29.72 3397 3397 MS2 19/28 Linfeng_091311_rIgG_3.raw High AGSTSWTGFQTK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 166 2.51 0.00 0 36 25 2 635.80518 1270.60307 -2.53 28.62 3247 3247 MS2 17/22 Linfeng_091311_rIgG_3.raw High DQNIFVSR Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 390 2.46 0.00 0 95 25 2 489.75171 978.49614 -4.31 27.96 3157 3157 MS2 13/14 Linfeng_091311_rIgG_3.raw High AGSTSWTGFQTK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 185 2.44 0.00 0 31 25 2 635.80829 1270.60930 2.37 26.07 2250 2250 MS2 16/22 Linfeng_122411_rIgG_3.raw High LINNNPEIFGPLK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 279 2.43 0.00 0 12 25 2 734.91034 1468.81340 -1.71 35.87 4202 4202 MS2 18/24 Linfeng_091311_rIgG_3.raw High DQNIFVSR Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 396 2.20 0.00 0 76 25 2 489.75430 978.50133 0.99 24.32 2021 2021 MS2 13/14 Linfeng_122411_rIgG_3.raw High TVAVDWAVAK Unambiguous 4 1 IPI00304187.8 CID 1.0000 0.0000 1 1 530 2.17 0.00 0 32 25 2 530.29388 1059.58049 -2.73 31.18 3591 3591 MS2 16/18 Linfeng_091311_rIgG_3.raw High AAEGVSAADMAK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 244 2.10 0.00 0 61 25 2 560.76776 1120.52825 -1.91 21.31 2237 2237 MS2 14/22 Linfeng_091311_rIgG_3.raw High FNQLVEQYK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 304 2.04 0.00 0 11 25 2 584.80414 1168.60100 1.09 4.69 532 532 MS2 14/16 Linfeng_122411_rIgG_3.raw High FNQLVEQYK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 328 2.02 0.00 0 36 25 2 584.80200 1168.59673 -2.57 27.23 3059 3059 MS2 14/16 Linfeng_091311_rIgG_3.raw High GFGFVQFK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 318 2.01 0.00 0 15 25 2 465.24561 929.48393 -4.39 36.70 4308 4308 MS2 13/14 Linfeng_091311_rIgG_3.raw IPI00304692.1 Heterogeneous nuclear ribonucleoprotein G 25.32 5 9 9 24 39.54 23.27 8 16 24.20 8.95 3 8 391 42.3 10.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 279 4.00 0.00 0 33 25 3 496.24557 1486.72217 0.55 38.57 4213 4213 MS2 25/52 Linfeng_122411_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 289 3.48 0.00 0 36 25 2 743.86670 1486.72612 3.21 38.73 4077 4077 MS2 20/26 Linfeng_122411_rIgG_6.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 233 3.28 0.00 0 6 8 2 743.86481 1486.72234 0.66 38.51 4205 4205 MS2 22/26 Linfeng_122411_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 269 3.27 0.00 0 35 25 2 743.86609 1486.72490 2.39 38.43 3472 3472 MS2 21/26 Linfeng_122411_rIgG_7.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 381 3.22 0.00 0 15 25 2 718.37445 1435.74162 -0.82 31.26 3208 3208 MS2 20/24 Linfeng_122411_rIgG_5.raw High VEQATKPSFESGR Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 330 3.18 0.00 0 17 25 2 718.36096 1435.71465 -2.09 19.34 1919 1919 MS2 16/24 Linfeng_091311_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 247 2.95 0.00 0 18 25 2 743.86267 1486.71807 -2.21 39.69 4628 4628 MS2 21/26 Linfeng_091311_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 225 2.92 0.00 0 25 2 743.86151 1486.71575 -3.77 39.88 4683 4683 MS2 21/26 Linfeng_091311_rIgG_6.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 223 2.73 0.00 0 26 25 2 743.86328 1486.71929 -1.39 39.84 4666 4666 MS2 21/26 Linfeng_091311_rIgG_7.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 340 2.64 0.00 0 17 25 2 718.37286 1435.73845 -3.03 32.95 3753 3753 MS2 19/24 Linfeng_091311_rIgG_5.raw Medium DRDYSDHPSGGSYR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 46 2.50 0.00 1 26 25 3 537.89728 1611.67728 -0.62 16.82 1561 1561 MS2 17/52 Linfeng_091311_rIgG_5.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 342 2.48 0.00 0 18 25 2 718.37286 1435.73845 -3.03 33.13 3824 3824 MS2 18/24 Linfeng_091311_rIgG_6.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 373 2.48 0.00 0 7 25 2 718.37665 1435.74602 2.24 31.89 3219 3219 MS2 19/24 Linfeng_122411_rIgG_6.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 396 2.46 0.00 0 10 25 2 718.37622 1435.74516 1.65 31.17 2798 2798 MS2 18/24 Linfeng_122411_rIgG_10.raw High YDDYSSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 13 2.45 0.00 0 15 25 2 496.70078 992.39427 -1.33 16.70 1544 1544 MS2 13/14 Linfeng_091311_rIgG_5.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 26 2.42 0.00 0 4 25 2 589.24054 1177.47380 -1.56 20.36 2065 2065 MS2 16/18 Linfeng_091311_rIgG_5.raw Medium DRDYSDHPSGGSYR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 42 2.38 0.00 1 28 25 3 537.89679 1611.67582 -1.53 16.94 1601 1601 MS2 18/52 Linfeng_091311_rIgG_7.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 340 2.35 0.00 0 18 25 2 718.37305 1435.73882 -2.77 33.07 3806 3806 MS2 19/24 Linfeng_091311_rIgG_7.raw High YDDYSSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 14 2.18 0.00 0 26 25 2 496.70074 992.39421 -1.39 16.91 1632 1632 MS2 14/14 Linfeng_091311_rIgG_6.raw High SDLYSSGR Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 97 2.17 0.00 0 25 25 2 442.70776 884.40825 -2.95 18.65 1823 1823 MS2 13/14 Linfeng_091311_rIgG_5.raw High GPPPSYGGSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 189 2.13 0.00 0 33 25 2 531.25122 1061.49516 -5.58 16.13 1466 1466 MS2 14/20 Linfeng_091311_rIgG_5.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 26 2.04 0.00 0 3 25 2 589.24072 1177.47417 -1.25 20.52 2134 2134 MS2 17/18 Linfeng_091311_rIgG_6.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 19 2.02 0.00 0 38 25 2 589.24017 1177.47307 -2.18 20.51 2103 2103 MS2 16/18 Linfeng_091311_rIgG_7.raw High ALEAVFGK Unambiguous 2 1 IPI00304692.1 CID 1.0000 0.0000 1 1 308 2.01 0.00 0 13 25 2 417.74051 834.47374 2.05 28.64 2793 2793 MS2 12/14 Linfeng_122411_rIgG_6.raw IPI00304885.2 Centromere protein C 1 7.53 3 4 4 4 0.00 13.61 7.53 4 4 943 106.8 9.39 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DINTEQGQNVLEILQDcFEEK Unambiguous 2 1 IPI00304885.2 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 5.63 0.00 0 5 25 3 841.39832 2522.18039 3.47 50.00 5343 5343 MS2 36/80 Linfeng_122411_rIgG_3.raw High TVLDTSYALIGETVNNYR Unambiguous 3 1 IPI00304885.2 CID 1.0000 0.0000 1 1 387 3.22 0.00 0 15 25 3 677.01160 2029.02024 -1.72 43.74 4541 4541 MS2 29/68 Linfeng_122411_rIgG_3.raw Medium FLNAEGSGGIVGHDEISR Unambiguous 2 1 IPI00304885.2 CID 1.0000 0.0000 1 1 327 2.46 0.00 0 19 25 3 619.97607 1857.91367 2.48 27.35 2423 2423 MS2 22/68 Linfeng_122411_rIgG_3.raw High TISPAESTALLQGR Unambiguous 3 1 IPI00304885.2 CID 1.0000 0.0000 1 1 413 2.29 0.00 0 15 25 2 722.39532 1443.78337 2.16 30.43 2827 2827 MS2 18/26 Linfeng_122411_rIgG_3.raw IPI00305068.5 Pre-mRNA-processing factor 6 7.65 2 6 6 6 15.49 7.65 6 6 941 106.9 8.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FELQHGTEEQQEEVR Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 179 3.85 0.00 0 12 25 3 620.28870 1858.85154 -2.76 23.80 2585 2585 MS2 29/56 Linfeng_091311_rIgG_3.raw High IDSDLGDAWAFFYK Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 237 2.62 0.00 0 45 25 2 824.38800 1647.76872 -0.18 47.50 5664 5664 MS2 19/26 Linfeng_091311_rIgG_3.raw High AAQDLcEEALR Unambiguous 2 1 IPI00305068.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 2.45 0.00 0 44 25 2 638.29950 1275.59172 -6.37 26.54 2964 2964 MS2 16/20 Linfeng_091311_rIgG_3.raw High AAVELEEPEDAR Unambiguous 1 1 IPI00305068.5 CID 1.0000 0.0000 1 1 186 2.31 0.00 0 8 25 2 664.81738 1328.62749 -4.10 25.78 2859 2859 MS2 17/22 Linfeng_091311_rIgG_3.raw High LESENDEYER Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 45 2.22 0.00 0 11 25 2 642.27167 1283.53606 -2.03 18.70 1874 1874 MS2 14/18 Linfeng_091311_rIgG_3.raw High WLAGDVPAAR Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 289 2.03 0.00 0 34 25 2 528.28418 1055.56108 -2.12 29.26 3334 3334 MS2 12/18 Linfeng_091311_rIgG_3.raw IPI00306723.3 CCAAT/enhancer-binding protein zeta 5.88 1 4 4 4 12.49 5.88 4 4 1054 120.9 5.94 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAIDDLQQGELEAFIQNLNLAK Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 351 5.00 0.00 0 28 25 3 800.75238 2400.24259 0.81 51.89 6288 6288 MS2 37/84 Linfeng_091311_rIgG_2.raw High ELLITDLLPDNR Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 323 2.75 0.00 0 61 25 2 706.39209 1411.77690 -1.62 44.62 5304 5304 MS2 16/22 Linfeng_091311_rIgG_3.raw High ALTVAHELLcNKPEEEK Unambiguous 1 1 IPI00306723.3 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 2.53 0.00 0 20 25 3 661.00519 1981.00101 -2.52 27.59 3144 3144 MS2 23/64 Linfeng_091311_rIgG_2.raw High AIVSSGTLGDR Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 631 2.20 0.00 0 34 25 2 538.28912 1075.57097 -3.07 23.98 2642 2642 MS2 18/20 Linfeng_091311_rIgG_2.raw IPI00328103.4 "Keratin, type I cytoskeletal 27" 12.64 1 3 5 53 29.28 8.50 4 13 0.00 89.45 8.06 3 40 459 49.8 5.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SASLQQQISDDAGATTSAR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 293 3.55 0.00 0 0 100 2 953.96594 1906.92461 7.57 31.59 3125 3125 MS2 26/36 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 121 2.58 0.00 0 57 100 2 555.25165 1109.49602 5.54 36.41 4651 4651 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.53 0.00 0 41 100 2 555.25256 1109.49785 7.19 38.01 4663 4663 MS2 14/16 Linfeng_20120125_PCAF_10.raw High ALEEANADLEQK Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 266 2.52 0.00 0 11 25 2 665.82623 1330.64519 -2.54 23.53 2514 2514 MS2 17/22 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 90 2.51 0.00 0 12 25 2 555.24683 1109.48638 -3.15 33.12 3823 3823 MS2 13/16 Linfeng_091311_rIgG_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.46 0.00 0 29 100 2 555.25269 1109.49809 7.41 36.78 4307 4307 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.43 0.00 0 3 44 2 555.25250 1109.49773 7.08 33.96 3497 3497 MS2 13/16 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 85 2.43 0.00 0 13 5 2 555.24652 1109.48577 -3.70 32.96 3554 3554 MS2 13/16 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 84 2.42 0.00 0 10 5 2 555.24640 1109.48552 -3.92 32.90 3858 3858 MS2 13/16 Linfeng_091311_rIgG_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.41 0.00 0 46 100 2 555.25250 1109.49773 7.08 38.18 4702 4702 MS2 14/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.38 0.00 0 38 100 2 555.25250 1109.49773 7.08 37.81 4990 4990 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LASYLENVR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 381 2.38 0.00 0 21 25 2 532.78894 1064.57060 -2.74 28.91 3250 3250 MS2 15/16 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.38 0.00 0 4 22 2 555.25269 1109.49809 7.41 33.88 3634 3634 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.37 0.00 0 37 88 2 555.25043 1109.49358 3.34 33.51 4068 4068 MS2 13/16 Linfeng_20120125_PCAF_8.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 113 2.37 0.00 0 3 6 2 555.25220 1109.49712 6.53 33.90 4042 4042 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.36 0.00 0 16 21 2 555.24707 1109.48686 -2.71 32.81 3807 3807 MS2 13/16 Linfeng_091311_rIgG_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.34 0.00 0 3 42 2 555.25226 1109.49724 6.64 34.21 3768 3768 MS2 13/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.32 0.00 0 50 100 2 555.25275 1109.49822 7.52 38.10 4684 4684 MS2 14/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 120 2.31 0.00 0 3 40 2 555.25250 1109.49773 7.08 34.01 3262 3262 MS2 13/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.27 0.00 0 32 100 2 555.25220 1109.49712 6.53 37.88 5006 5006 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.26 0.00 0 6 58 2 555.25226 1109.49724 6.64 34.92 3870 3870 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.25 0.00 0 36 100 2 555.25232 1109.49736 6.75 33.38 3125 3125 MS2 14/16 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 89 2.24 0.00 0 13 10 2 555.24988 1109.49248 2.35 33.76 4152 4152 MS2 13/16 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.23 0.00 0 4 27 2 555.25269 1109.49809 7.41 34.50 4317 4317 MS2 13/16 Linfeng_20120125_PCAF_8.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.19 0.00 0 32 100 2 555.25220 1109.49712 6.53 35.20 3603 3603 MS2 13/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 87 2.16 0.00 0 6 19 2 555.24683 1109.48638 -3.15 33.03 3764 3764 MS2 13/16 Linfeng_091311_rIgG_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.16 0.00 0 32 100 2 555.25256 1109.49785 7.19 33.20 3249 3249 MS2 13/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 128 2.15 0.00 0 37 100 2 555.25244 1109.49761 6.97 35.38 3566 3566 MS2 13/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 90 2.14 0.00 0 24 25 2 555.24707 1109.48686 -2.71 33.08 3807 3807 MS2 13/16 Linfeng_091311_rIgG_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 83 2.13 0.00 0 40 25 2 555.24725 1109.48723 -2.38 32.91 3811 3811 MS2 14/16 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.12 0.00 0 44 100 2 555.25293 1109.49858 7.85 37.66 4955 4955 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.12 0.00 0 5 23 2 555.25232 1109.49736 6.75 34.94 4297 4297 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 134 2.12 0.00 0 36 100 2 555.25238 1109.49748 6.86 33.17 3207 3207 MS2 13/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.11 0.00 0 24 100 2 555.25262 1109.49797 7.30 35.25 3950 3950 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 124 2.11 0.00 0 11 100 2 555.25250 1109.49773 7.08 35.03 3489 3489 MS2 14/16 Linfeng_20120125_PCAF_3.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 345 2.08 0.00 0 8 100 2 545.77240 1090.53752 5.96 21.28 1421 1421 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.08 0.00 0 22 100 2 555.25165 1109.49602 5.54 32.96 3268 3268 MS2 14/16 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 127 2.07 0.00 0 29 100 2 555.25226 1109.49724 6.64 36.72 3865 3865 MS2 14/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.07 0.00 0 16 100 2 555.25226 1109.49724 6.64 34.78 4405 4405 MS2 13/16 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 117 2.06 0.00 0 24 100 2 555.25275 1109.49822 7.52 35.32 3965 3965 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.06 0.00 0 43 100 2 555.25269 1109.49809 7.41 35.34 3721 3721 MS2 14/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 104 2.06 0.00 0 6 100 2 555.25220 1109.49712 6.53 1.52 142 142 MS2 10/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 114 2.06 0.00 0 2 56 2 555.25287 1109.49846 7.74 34.19 3471 3471 MS2 14/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.05 0.00 0 38 100 2 555.25226 1109.49724 6.64 36.56 3828 3828 MS2 12/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 88 2.04 0.00 0 14 25 2 555.24677 1109.48625 -3.26 33.14 3878 3878 MS2 13/16 Linfeng_091311_rIgG_8.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.03 0.00 0 2 48 2 555.25226 1109.49724 6.64 34.40 3348 3348 MS2 13/16 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 131 2.03 0.00 0 16 100 2 555.25250 1109.49773 7.08 34.98 3731 3731 MS2 13/16 Linfeng_20120125_PCAF_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.01 0.00 0 0 100 2 545.77197 1090.53667 5.18 20.83 1549 1549 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 122 2.01 0.00 0 43 100 2 555.25281 1109.49834 7.63 35.48 4076 4076 MS2 13/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.00 0.00 0 30 100 2 555.25177 1109.49626 5.76 32.90 3799 3799 MS2 13/16 Linfeng_20120125_PCAF_1.raw IPI00328985.1 Isoform 1 of THO complex subunit 6 homolog 20.23 3 5 5 5 13.74 20.23 5 5 0.00 341 37.5 7.43 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TSLEVPEINALLLVPK Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 78 3.23 0.00 0 9 25 3 579.34442 1736.01871 -1.03 47.22 5600 5600 MS2 27/60 Linfeng_091311_rIgG_6.raw High AVPLAVPLGQTEVFQALQR Unambiguous 2 1 IPI00328985.1 CID 1.0000 0.0000 1 1 167 3.08 0.00 0 9 25 3 679.71960 2037.14426 -2.45 44.54 5264 5264 MS2 33/72 Linfeng_091311_rIgG_6.raw High VDVFTNLGYR Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 337 2.90 0.00 0 23 25 2 592.30719 1183.60710 -2.99 36.05 4199 4199 MS2 17/18 Linfeng_091311_rIgG_6.raw High SPEVLSGGEDGAVR Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 215 2.52 0.00 0 5 25 2 686.83734 1372.66741 -2.17 24.93 2733 2733 MS2 22/26 Linfeng_091311_rIgG_6.raw High VLTAAGNScR Unambiguous 2 1 IPI00328985.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 470 2.01 0.00 0 44 25 2 524.76288 1048.51848 -1.88 16.74 1608 1608 MS2 15/18 Linfeng_091311_rIgG_6.raw IPI00329389.8 60S ribosomal protein L6 15.63 3 4 4 6 18.39 15.63 4 6 288 32.7 10.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QLASGLLLVTGPLVLNR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 19 4.20 0.00 0 60 25 2 882.53949 1764.07170 -1.46 46.54 5515 5515 MS2 24/32 Linfeng_091311_rIgG_6.raw High QLASGLLLVTGPLVLNR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 28 3.66 0.00 0 28 25 3 588.69519 1764.07102 -1.84 46.50 5510 5510 MS2 30/64 Linfeng_091311_rIgG_6.raw High HQEGEIFDTEKEK Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 202 2.78 0.00 1 25 25 3 530.58484 1589.73996 -2.70 20.86 2181 2181 MS2 24/48 Linfeng_091311_rIgG_6.raw High ASITPGTILIILTGR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 76 2.68 0.00 0 23 25 3 509.31519 1525.93100 -0.18 51.88 6138 6138 MS2 29/56 Linfeng_091311_rIgG_6.raw High ASITPGTILIILTGR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 61 2.68 0.00 0 34 25 3 509.31610 1525.93375 1.62 52.13 6144 6144 MS2 23/56 Linfeng_091311_rIgG_7.raw High HQEGEIFDTEK Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 147 2.40 0.00 0 12 25 2 666.80542 1332.60356 -2.35 23.43 2528 2528 MS2 17/20 Linfeng_091311_rIgG_6.raw IPI00373877.3 Isoform 1 of Zinc finger protein 326 9.62 1 5 5 5 12.59 9.62 5 5 0.00 582 65.6 5.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DYGHGSYGGQR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 58 2.93 0.00 0 24 25 3 399.50662 1196.50531 -2.20 16.49 1552 1552 MS2 18/40 Linfeng_091311_rIgG_4.raw High SGYGFNEPEQSR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 62 2.76 0.00 0 42 25 2 685.80042 1370.59355 -2.65 24.78 2715 2715 MS2 15/22 Linfeng_091311_rIgG_4.raw High ESVLTATSILNNPIVK Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 251 2.74 0.00 0 33 25 3 566.99133 1698.95945 -2.50 40.65 4802 4802 MS2 26/60 Linfeng_091311_rIgG_4.raw High FGGSYGGR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 90 2.10 0.00 0 14 25 2 400.68680 800.36632 -2.86 18.87 1887 1887 MS2 12/14 Linfeng_091311_rIgG_4.raw High NSLDSFGGR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 147 2.07 0.00 0 18 25 2 476.72665 952.44603 -2.41 24.96 2740 2740 MS2 14/16 Linfeng_091311_rIgG_4.raw IPI00375454.8 Isoform 2 of Telomere-associated protein RIF1 2.17 4 3 3 10 0.00 22.05 2.17 3 10 2446 271.5 5.41 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LIAEQTLQENLIEK Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 309 2.92 0.00 0 35 100 2 821.46198 1641.91667 6.59 41.72 5909 5909 MS2 18/26 Linfeng_20120125_PCAF_1.raw High ELDPSLVSANDSPSGMQTR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 203 2.50 0.00 0 39 100 2 1002.47729 2003.94731 6.66 32.70 3751 3751 MS2 13/36 Linfeng_20120125_PCAF_1.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 295 2.19 0.00 2 1 26 2 1139.57642 2278.14556 -5.28 46.76 7551 7551 MS2 13/38 Linfeng_20120125_PCAF_5.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 298 2.16 0.00 2 72 100 2 1139.57642 2278.14556 -5.28 43.25 6544 6544 MS2 11/38 Linfeng_20120125_PCAF_5.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 278 2.12 0.00 2 0 100 2 1139.57983 2278.15239 -2.28 47.27 6304 6304 MS2 12/38 Linfeng_20120125_PCAF_3.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 274 2.08 0.00 2 14 100 2 1139.57922 2278.15117 -2.81 47.19 6795 6795 MS2 14/38 Linfeng_20120125_PCAF_6.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 293 2.05 0.00 2 4 100 2 1139.57874 2278.15019 -3.24 43.54 6618 6618 MS2 11/38 Linfeng_20120125_PCAF_5.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 290 2.03 0.00 2 100 100 2 1139.57874 2278.15019 -3.24 47.06 6565 6565 MS2 13/38 Linfeng_20120125_PCAF_4.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 278 2.02 0.00 2 73 100 2 1139.58325 2278.15923 0.72 47.19 6285 6285 MS2 12/38 Linfeng_20120125_PCAF_3.raw High RVSFADPIYQAGLADDIDRR Unambiguous 4 1 IPI00375454.8 CID 1.0000 0.0000 1 1 280 2.00 0.00 2 6 35 2 1139.57629 2278.14531 -5.39 46.55 7497 7497 MS2 12/38 Linfeng_20120125_PCAF_5.raw IPI00375911.2 "Keratin, type I cytoskeletal 25" 8.22 1 1 3 40 0.00 89.41 8.22 3 40 450 49.3 5.08 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SASLQQQISEDVGATTSAR Unambiguous 1 1 IPI00375911.2 CID 1.0000 0.0000 1 1 326 3.50 0.00 0 15 100 2 974.98889 1948.97051 6.87 41.60 5439 5439 MS2 22/36 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 121 2.58 0.00 0 57 100 2 555.25165 1109.49602 5.54 36.41 4651 4651 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.53 0.00 0 41 100 2 555.25256 1109.49785 7.19 38.01 4663 4663 MS2 14/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.46 0.00 0 29 100 2 555.25269 1109.49809 7.41 36.78 4307 4307 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.43 0.00 0 3 44 2 555.25250 1109.49773 7.08 33.96 3497 3497 MS2 13/16 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.41 0.00 0 46 100 2 555.25250 1109.49773 7.08 38.18 4702 4702 MS2 14/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.38 0.00 0 38 100 2 555.25250 1109.49773 7.08 37.81 4990 4990 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.38 0.00 0 4 22 2 555.25269 1109.49809 7.41 33.88 3634 3634 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.37 0.00 0 37 88 2 555.25043 1109.49358 3.34 33.51 4068 4068 MS2 13/16 Linfeng_20120125_PCAF_8.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 113 2.37 0.00 0 3 6 2 555.25220 1109.49712 6.53 33.90 4042 4042 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.34 0.00 0 3 42 2 555.25226 1109.49724 6.64 34.21 3768 3768 MS2 13/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.32 0.00 0 50 100 2 555.25275 1109.49822 7.52 38.10 4684 4684 MS2 14/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 120 2.31 0.00 0 3 40 2 555.25250 1109.49773 7.08 34.01 3262 3262 MS2 13/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 125 2.27 0.00 0 32 100 2 555.25220 1109.49712 6.53 37.88 5006 5006 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.26 0.00 0 6 58 2 555.25226 1109.49724 6.64 34.92 3870 3870 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.25 0.00 0 36 100 2 555.25232 1109.49736 6.75 33.38 3125 3125 MS2 14/16 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 89 2.24 0.00 0 13 10 2 555.24988 1109.49248 2.35 33.76 4152 4152 MS2 13/16 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.23 0.00 0 4 27 2 555.25269 1109.49809 7.41 34.50 4317 4317 MS2 13/16 Linfeng_20120125_PCAF_8.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 116 2.19 0.00 0 32 100 2 555.25220 1109.49712 6.53 35.20 3603 3603 MS2 13/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.16 0.00 0 32 100 2 555.25256 1109.49785 7.19 33.20 3249 3249 MS2 13/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 128 2.15 0.00 0 37 100 2 555.25244 1109.49761 6.97 35.38 3566 3566 MS2 13/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 123 2.12 0.00 0 44 100 2 555.25293 1109.49858 7.85 37.66 4955 4955 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.12 0.00 0 5 23 2 555.25232 1109.49736 6.75 34.94 4297 4297 MS2 13/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 134 2.12 0.00 0 36 100 2 555.25238 1109.49748 6.86 33.17 3207 3207 MS2 13/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.11 0.00 0 24 100 2 555.25262 1109.49797 7.30 35.25 3950 3950 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 124 2.11 0.00 0 11 100 2 555.25250 1109.49773 7.08 35.03 3489 3489 MS2 14/16 Linfeng_20120125_PCAF_3.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 345 2.08 0.00 0 8 100 2 545.77240 1090.53752 5.96 21.28 1421 1421 MS2 14/16 Linfeng_20120125_PCAF_1.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.08 0.00 0 22 100 2 555.25165 1109.49602 5.54 32.96 3268 3268 MS2 14/16 Linfeng_20120125_PCAF_4.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 127 2.07 0.00 0 29 100 2 555.25226 1109.49724 6.64 36.72 3865 3865 MS2 14/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.07 0.00 0 16 100 2 555.25226 1109.49724 6.64 34.78 4405 4405 MS2 13/16 Linfeng_20120125_PCAF_5.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 117 2.06 0.00 0 24 100 2 555.25275 1109.49822 7.52 35.32 3965 3965 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 129 2.06 0.00 0 43 100 2 555.25269 1109.49809 7.41 35.34 3721 3721 MS2 14/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 104 2.06 0.00 0 6 100 2 555.25220 1109.49712 6.53 1.52 142 142 MS2 10/16 Linfeng_20120125_PCAF_2.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 114 2.06 0.00 0 2 56 2 555.25287 1109.49846 7.74 34.19 3471 3471 MS2 14/16 Linfeng_20120125_PCAF_9.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 130 2.05 0.00 0 38 100 2 555.25226 1109.49724 6.64 36.56 3828 3828 MS2 12/16 Linfeng_20120125_PCAF_3.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 119 2.03 0.00 0 2 48 2 555.25226 1109.49724 6.64 34.40 3348 3348 MS2 13/16 Linfeng_20120125_PCAF_7.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 131 2.03 0.00 0 16 100 2 555.25250 1109.49773 7.08 34.98 3731 3731 MS2 13/16 Linfeng_20120125_PCAF_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.01 0.00 0 0 100 2 545.77197 1090.53667 5.18 20.83 1549 1549 MS2 14/16 Linfeng_20120125_PCAF_6.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 122 2.01 0.00 0 43 100 2 555.25281 1109.49834 7.63 35.48 4076 4076 MS2 13/16 Linfeng_20120125_PCAF_10.raw High DAEAWFNEK Unambiguous 4 3 IPI00009865.4;IPI00328103.4;IPI00375911.2 CID 1.0000 0.0000 1 1 118 2.00 0.00 0 30 100 2 555.25177 1109.49626 5.76 32.90 3799 3799 MS2 13/16 Linfeng_20120125_PCAF_1.raw IPI00376379.4 "keratin, type II cytoskeletal 1b" 26.12 1 8 14 187 111.45 12.98 6 37 228.36 12.46 8 72 269.39 11.25 5 78 578 61.9 5.99 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 4.31 0.00 0 34 100 2 738.40143 1475.79558 6.95 29.07 2482 2482 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.19 0.00 0 34 98 2 738.40088 1475.79448 6.21 27.83 2583 2583 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 4.15 0.00 0 34 100 2 738.40063 1475.79399 5.88 29.06 2315 2315 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 414 4.15 0.00 0 40 100 2 738.40167 1475.79607 7.28 28.89 2395 2395 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.08 0.00 0 49 100 2 738.40100 1475.79473 6.37 28.54 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 4.06 0.00 0 13 42 2 738.40063 1475.79399 5.88 27.70 2555 2555 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 4.05 0.00 0 35 100 2 738.40100 1475.79473 6.37 27.97 2282 2282 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 4.05 0.00 0 33 100 2 738.40045 1475.79363 5.63 27.85 2450 2450 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 4.02 0.00 0 37 100 2 738.40094 1475.79460 6.29 28.65 2869 2869 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 430 3.99 0.00 0 35 100 2 738.40155 1475.79582 7.12 27.90 2225 2225 MS2 19/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.95 0.00 0 36 100 2 738.40094 1475.79460 6.29 28.05 2304 2304 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.95 0.00 0 38 100 2 738.40149 1475.79570 7.03 28.91 2398 2398 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.94 0.00 0 41 100 2 738.40088 1475.79448 6.21 28.61 2861 2861 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.92 0.00 0 4 2 2 738.40009 1475.79289 5.13 26.66 2303 2303 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.92 0.00 0 34 100 2 738.40167 1475.79607 7.28 28.81 2272 2272 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.89 0.00 0 5 97 2 738.40143 1475.79558 6.95 27.68 2418 2418 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.88 0.00 0 1 99 2 738.40143 1475.79558 6.95 27.72 2087 2087 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.84 0.00 0 3 6 2 738.40247 1475.79766 8.36 26.74 2428 2428 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.83 0.00 0 33 100 2 738.40210 1475.79692 7.86 28.80 2436 2436 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.83 0.00 0 17 100 2 738.40173 1475.79619 7.36 29.69 2769 2769 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.79 0.00 0 27 100 2 738.40155 1475.79582 7.12 28.04 2147 2147 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 3.79 0.00 0 31 100 2 738.40143 1475.79558 6.95 28.11 2503 2503 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.79 0.00 0 8 100 2 738.40204 1475.79680 7.78 27.77 2669 2669 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.78 0.00 0 2 92 2 738.40106 1475.79485 6.45 27.63 2227 2227 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 436 3.77 0.00 0 35 100 2 738.40222 1475.79717 8.03 28.63 2873 2873 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.75 0.00 0 2 100 2 738.40137 1475.79546 6.87 25.70 2194 2194 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.75 0.00 0 3 100 2 738.40100 1475.79473 6.37 27.73 2234 2234 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.73 0.00 0 55 100 2 738.40118 1475.79509 6.62 29.70 2582 2582 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.72 0.00 0 57 100 2 738.40063 1475.79399 5.88 29.68 3021 3021 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 409 3.70 0.00 0 40 100 2 738.40137 1475.79546 6.87 28.12 2210 2210 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.69 0.00 0 38 100 2 738.40179 1475.79631 7.45 27.90 2702 2702 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 440 3.69 0.00 0 3 11 2 738.40253 1475.79778 8.44 26.70 2016 2016 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.67 0.00 0 49 100 2 738.40167 1475.79607 7.28 29.54 2744 2744 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 389 3.66 0.00 0 2 6 2 738.39984 1475.79241 4.80 26.71 2410 2410 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.64 0.00 0 33 100 2 738.40198 1475.79668 7.70 28.58 2863 2863 MS2 19/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 433 3.61 0.00 0 46 100 2 738.40161 1475.79595 7.20 28.52 2278 2278 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 437 3.60 0.00 0 3 100 2 738.40222 1475.79717 8.03 27.71 2191 2191 MS2 20/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.59 0.00 0 3 100 2 738.40155 1475.79582 7.12 27.69 2141 2141 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 415 3.58 0.00 0 4 6 2 738.40179 1475.79631 7.45 26.65 2220 2220 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.58 0.00 0 46 100 2 738.40088 1475.79448 6.21 30.13 3131 3131 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.57 0.00 0 49 100 2 738.40106 1475.79485 6.45 29.61 2739 2739 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.55 0.00 0 32 100 2 738.40167 1475.79607 7.28 30.64 2946 2946 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.51 0.00 0 52 100 2 738.40131 1475.79534 6.79 28.34 2248 2248 MS2 19/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.51 0.00 0 11 100 2 738.40149 1475.79570 7.03 25.74 2121 2121 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 420 3.51 0.00 0 23 100 2 738.40149 1475.79570 7.03 25.71 1781 1781 MS2 18/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 418 3.48 0.00 0 3 14 2 738.40198 1475.79668 7.70 26.75 2267 2267 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.48 0.00 0 4 19 2 738.40240 1475.79753 8.27 26.68 2003 2003 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.48 0.00 0 4 8 2 738.40216 1475.79704 7.94 26.72 1917 1917 MS2 20/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 431 3.46 0.00 0 4 6 2 738.40149 1475.79570 7.03 26.71 2034 2034 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 349 3.44 0.00 0 2 78 2 738.39935 1475.79143 4.14 25.73 2183 2183 MS2 18/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.44 0.00 0 54 100 2 738.40057 1475.79387 5.79 29.60 3002 3002 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.44 0.00 0 4 9 2 738.40198 1475.79668 7.70 26.61 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 412 3.42 0.00 0 5 100 2 738.40100 1475.79473 6.37 27.78 2435 2435 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.38 0.00 0 71 100 2 738.40155 1475.79582 7.12 30.39 2890 2890 MS2 19/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 408 3.33 0.00 0 0 100 2 738.40051 1475.79375 5.71 25.61 1927 1927 MS2 19/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.30 0.00 0 61 100 2 738.40021 1475.79314 5.30 30.32 3176 3176 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 500 3.28 0.00 0 6 25 2 658.85822 1316.70915 2.63 45.22 4738 4738 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 438 3.28 0.00 0 40 100 2 738.40027 1475.79326 5.38 29.89 2610 2610 MS2 18/22 Linfeng_20120125_PCAF_2.raw High STSGFcQGGGVGGFGGGR Unambiguous 1 1 IPI00376379.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.27 0.00 0 8 25 2 822.86499 1644.72270 2.60 25.44 2193 2193 MS2 21/34 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.18 0.00 0 33 100 2 738.40088 1475.79448 6.21 25.70 1871 1871 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 417 3.14 0.00 0 14 100 2 738.40173 1475.79619 7.36 25.64 2052 2052 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.11 0.00 0 50 100 2 738.40167 1475.79607 7.28 25.64 2077 2077 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 407 3.09 0.00 0 22 100 2 738.40057 1475.79387 5.79 37.76 4979 4979 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.05 0.00 0 27 100 2 738.40045 1475.79363 5.63 29.88 3068 3068 MS2 20/22 Linfeng_20120125_PCAF_1.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 507 3.04 0.00 0 14 25 2 658.85522 1316.70317 -1.91 46.48 5500 5500 MS2 18/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 387 3.04 0.00 0 20 100 2 738.40088 1475.79448 6.21 25.68 1879 1879 MS2 19/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 508 3.00 0.00 0 4 25 2 658.85529 1316.70329 -1.82 46.25 5579 5579 MS2 18/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High VDTLTGEVNFLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 331 2.96 0.00 0 4 100 2 668.36548 1335.72368 6.11 44.93 5581 5581 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 543 2.94 0.00 0 20 25 2 658.85797 1316.70867 2.26 45.17 4600 4600 MS2 19/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.92 0.00 0 26 100 2 738.40045 1475.79363 5.63 29.96 3089 3089 MS2 17/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 375 2.84 0.00 0 15 100 2 738.40125 1475.79521 6.70 25.68 1807 1807 MS2 19/22 Linfeng_20120125_PCAF_9.raw High STSGFcQGGGVGGFGGGR Unambiguous 1 1 IPI00376379.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.82 0.00 0 36 100 2 822.86774 1644.72820 5.94 27.55 2520 2520 MS2 21/34 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 425 2.80 0.00 0 34 100 2 738.40155 1475.79582 7.12 38.10 4356 4356 MS2 17/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 405 2.78 0.00 0 24 100 2 738.40173 1475.79619 7.36 38.09 4445 4445 MS2 17/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High STSGFcQGGGVGGFGGGR Unambiguous 1 1 IPI00376379.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 86 2.67 0.00 0 55 100 2 822.86847 1644.72966 6.83 27.50 2508 2508 MS2 18/34 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 609 2.64 0.00 0 33 25 2 658.85590 1316.70452 -0.89 46.30 5512 5512 MS2 18/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 0 50 100 2 738.40088 1475.79448 6.21 38.78 5220 5220 MS2 15/22 Linfeng_20120125_PCAF_1.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 570 2.54 0.00 0 43 25 2 658.85797 1316.70867 2.26 45.33 4342 4342 MS2 16/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High TGSENDFVVLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 396 2.52 0.00 0 12 25 2 604.81250 1208.61772 1.59 27.99 2370 2370 MS2 15/20 Linfeng_122411_rIgG_10.raw High VYSTSSSAGSGGGSPAVGSVcYAR Unambiguous 1 1 IPI00376379.4 C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 150 2.50 0.00 0 16 25 3 755.35028 2264.03629 5.04 48.66 5811 5811 MS2 21/92 Linfeng_091311_rIgG_4.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 503 2.46 0.00 0 28 25 2 658.85516 1316.70305 -2.01 46.15 5319 5319 MS2 18/22 Linfeng_091311_rIgG_1.raw High VDTLTGEVNFLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 350 2.43 0.00 0 10 100 2 668.36505 1335.72283 5.47 44.62 6611 6611 MS2 15/22 Linfeng_20120125_PCAF_1.raw High VDTLTGEVNFLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 335 2.41 0.00 0 33 100 2 668.36578 1335.72429 6.57 44.77 6210 6210 MS2 18/22 Linfeng_20120125_PCAF_6.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 597 2.39 0.00 0 38 25 2 658.85577 1316.70427 -1.08 46.44 5503 5503 MS2 18/22 Linfeng_091311_rIgG_6.raw Medium VRFLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 312 2.39 0.00 1 46 25 3 577.65790 1730.95914 2.47 25.30 2175 2175 MS2 24/52 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00021304.1;IPI00220327.4;IPI00376379.4 CID 1.0000 0.0000 1 1 416 2.37 0.00 0 46 100 2 738.40057 1475.79387 5.79 38.23 4200 4200 MS2 14/22 Linfeng_20120125_PCAF_3.raw Medium VYSTSSSAGSGGGSPAVGSVcYAR Unambiguous 1 1 IPI00376379.4 C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 142 2.35 0.00 0 22 25 3 755.35010 2264.03574 4.79 48.58 5801 5801 MS2 22/92 Linfeng_091311_rIgG_3.raw High SKDEAEALYQTK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 237 2.33 0.00 1 17 25 2 691.84161 1382.67595 -2.82 21.66 2315 2315 MS2 15/22 Linfeng_091311_rIgG_2.raw High VDTLTGEVNFLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 330 2.33 0.00 0 26 100 2 668.36584 1335.72441 6.66 45.03 5770 5770 MS2 17/22 Linfeng_20120125_PCAF_3.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 389 2.32 0.00 0 56 25 2 589.81323 1178.61919 2.32 24.43 2174 2174 MS2 14/18 Linfeng_122411_rIgG_4.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High VDTLTGEVNFLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 338 2.25 0.00 0 37 100 2 668.36591 1335.72453 6.75 45.21 6752 6752 MS2 16/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High SKDEAEALYQTK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 1 16 25 2 691.84210 1382.67693 -2.11 20.49 1867 1867 MS2 14/22 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 394 2.11 0.00 0 41 25 2 589.81329 1178.61931 2.43 20.13 1599 1599 MS2 15/18 Linfeng_122411_rIgG_2.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 378 2.10 0.00 0 17 25 2 589.81293 1178.61858 1.80 26.19 2466 2466 MS2 15/18 Linfeng_122411_rIgG_6.raw High LSLDVEIATYR Unambiguous 3 2 IPI00477227.3;IPI00376379.4 CID 1.0000 0.0000 1 1 358 2.09 0.00 0 15 100 2 640.35272 1279.69817 6.94 45.90 6918 6918 MS2 15/20 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LQDLEEALQQSK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 461 2.07 0.00 0 24 100 2 701.36920 1401.73113 6.47 37.24 4853 4853 MS2 19/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00376481.6 Isoform 3 of Centromere protein V 17.65 1 3 3 3 10.04 17.65 3 3 0.00 272 29.7 9.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SGASAAPAASAAAALAPSATR Unambiguous 1 1 IPI00376481.6 CID 1.0000 0.0000 1 1 336 4.16 0.00 0 4 25 2 885.45911 1769.91094 -1.82 29.90 3384 3384 MS2 23/40 Linfeng_091311_rIgG_7.raw High LLLDTFEYQGLVK Unambiguous 1 1 IPI00376481.6 CID 1.0000 0.0000 1 1 331 3.55 0.00 0 14 25 2 769.92529 1538.84331 -2.09 42.72 5029 5029 MS2 22/24 Linfeng_091311_rIgG_7.raw Medium GAEHITTYTFNTHK Unambiguous 1 1 IPI00376481.6 CID 1.0000 0.0000 1 1 326 2.32 0.00 0 19 25 3 540.59741 1619.77768 -2.22 23.57 2523 2523 MS2 17/52 Linfeng_091311_rIgG_7.raw IPI00383296.5 Isoform 2 of Heterogeneous nuclear ribonucleoprotein M 33.43 2 21 21 39 53.95 27.79 17 20 34.89 15.05 9 11 19.42 12.59 6 8 691 73.6 8.82 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 323 4.36 0.00 0 10 25 2 876.94250 1752.87773 2.97 44.31 4730 4730 MS2 23/30 Linfeng_122411_rIgG_4.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 334 4.32 0.00 0 41 25 2 876.93896 1752.87065 -1.07 45.51 5413 5413 MS2 22/30 Linfeng_091311_rIgG_4.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 419 3.86 0.00 0 13 25 3 584.96198 1752.87137 -0.66 45.53 5415 5415 MS2 35/60 Linfeng_091311_rIgG_4.raw High FNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 280 3.68 0.00 0 10 25 3 522.58649 1565.74491 2.02 27.27 2554 2554 MS2 28/48 Linfeng_122411_rIgG_4.raw High GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 267 3.67 0.00 0 0 100 2 1017.98749 2034.96770 7.21 38.95 4355 4355 MS2 19/44 Linfeng_20120125_PCAF_3.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 403 3.64 0.00 0 15 25 3 584.96362 1752.87632 2.16 44.30 4729 4729 MS2 33/60 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 355 3.41 0.00 0 8 25 3 476.25809 1426.75971 1.40 34.69 3521 3521 MS2 25/48 Linfeng_122411_rIgG_4.raw High GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 240 3.30 0.00 0 9 13 3 678.99017 2034.95597 1.45 30.11 2931 2931 MS2 30/88 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 298 3.29 0.00 0 14 25 2 713.88043 1426.75359 -2.89 35.78 4183 4183 MS2 20/24 Linfeng_091311_rIgG_4.raw High GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 226 3.14 0.00 0 4 25 3 678.98724 2034.94718 -2.87 31.22 3589 3589 MS2 28/88 Linfeng_091311_rIgG_4.raw High DKFNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 296 3.07 0.00 1 13 25 4 452.97211 1808.86660 1.62 27.10 2531 2531 MS2 32/84 Linfeng_122411_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 222 2.99 0.00 0 18 25 2 642.81525 1284.62322 -4.65 21.93 2324 2324 MS2 18/28 Linfeng_091311_rIgG_3.raw High FNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.98 0.00 0 22 25 3 522.58411 1565.73777 -2.54 28.80 3266 3266 MS2 26/48 Linfeng_091311_rIgG_4.raw High VKEDPDGEHAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 219 2.92 0.00 1 26 25 3 418.20258 1252.59317 1.16 2.44 208 208 MS2 24/40 Linfeng_091311_rIgG_4.raw Medium DKFNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 290 2.90 0.00 1 7 25 4 452.97031 1808.85940 -2.36 28.61 3240 3240 MS2 29/84 Linfeng_091311_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 238 2.89 0.00 0 8 4 2 642.81720 1284.62712 -1.61 3.34 341 341 MS2 22/28 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 295 2.86 0.00 0 46 25 2 713.88416 1426.76103 2.33 34.58 3508 3508 MS2 20/24 Linfeng_122411_rIgG_4.raw High AFITNIPFDVK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 352 2.70 0.00 0 22 25 2 632.85187 1264.69646 2.21 38.67 4022 4022 MS2 17/20 Linfeng_122411_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 245 2.65 0.00 0 5 25 2 642.81671 1284.62615 -2.37 21.82 2302 2302 MS2 22/28 Linfeng_091311_rIgG_4.raw High GEGERPAQNEK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 161 2.63 0.00 0 15 25 2 607.79156 1214.57585 -0.18 2.23 183 183 MS2 14/20 Linfeng_091311_rIgG_4.raw High INEILSNALK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 430 2.62 0.00 0 4 8 2 557.82758 1114.64787 1.05 31.01 3047 3047 MS2 16/18 Linfeng_122411_rIgG_4.raw High MGANSLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 290 2.50 0.00 0 10 25 2 439.21182 877.41637 -3.78 19.32 1950 1950 MS2 13/14 Linfeng_091311_rIgG_4.raw Medium GGNRFEPYANPTK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 271 2.48 0.00 1 27 25 3 484.23911 1450.70276 -3.20 22.55 2403 2403 MS2 26/48 Linfeng_091311_rIgG_4.raw Medium GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 281 2.45 0.00 0 31 100 3 678.99438 2034.96860 7.66 39.07 4381 4381 MS2 24/88 Linfeng_20120125_PCAF_3.raw Medium GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 227 2.41 0.00 0 26 25 3 678.98730 2034.94736 -2.78 31.21 3594 3594 MS2 25/88 Linfeng_091311_rIgG_3.raw High MGAGMGFGLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 188 2.38 0.00 0 22 100 2 563.26636 1125.52544 6.56 38.37 4230 4230 MS2 16/20 Linfeng_20120125_PCAF_3.raw High INEILSNALKR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 297 2.36 0.00 1 7 25 2 635.87830 1270.74932 1.18 28.18 2675 2675 MS2 17/20 Linfeng_122411_rIgG_4.raw High FNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 296 2.30 0.00 0 10 100 2 783.38092 1565.75456 8.19 35.17 3519 3519 MS2 19/24 Linfeng_20120125_PCAF_3.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 353 2.26 0.00 0 63 100 2 713.88599 1426.76470 4.90 43.33 5350 5350 MS2 16/24 Linfeng_20120125_PCAF_3.raw High MGANNLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 309 2.22 0.00 0 20 25 2 452.71774 904.42821 -2.62 18.70 1863 1863 MS2 12/14 Linfeng_091311_rIgG_4.raw High ADILEDK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 447 2.20 0.00 0 38 25 2 402.20984 803.41240 -2.70 22.48 2393 2393 MS2 11/12 Linfeng_091311_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 357 2.17 0.00 0 19 100 2 713.88599 1426.76470 4.90 43.64 5740 5740 MS2 20/24 Linfeng_20120125_PCAF_4.raw High MGPAMGPALGAGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 295 2.16 0.00 0 9 100 2 714.36572 1427.72417 7.49 36.95 3919 3919 MS2 17/28 Linfeng_20120125_PCAF_3.raw High AFITNIPFDVK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 357 2.15 0.00 0 36 25 2 632.84894 1264.69060 -2.42 40.08 4729 4729 MS2 15/20 Linfeng_091311_rIgG_4.raw High VGQTIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 560 2.15 0.00 0 18 25 2 401.72394 802.44060 -1.47 15.20 1368 1368 MS2 11/12 Linfeng_091311_rIgG_4.raw High AAEVLNK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 443 2.09 0.00 0 41 25 2 372.71564 744.42400 -1.44 14.79 1309 1309 MS2 9/12 Linfeng_091311_rIgG_4.raw High FESPEVAER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 239 2.06 0.00 0 45 25 2 532.25470 1063.50212 -3.20 23.32 2510 2510 MS2 13/16 Linfeng_091311_rIgG_4.raw High MVPAGMGAGLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 312 2.04 0.00 0 29 100 2 594.80115 1188.59502 7.19 28.58 2233 2233 MS2 15/22 Linfeng_20120125_PCAF_3.raw High INEILSNALK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 466 2.01 0.00 0 32 25 2 557.82483 1114.64238 -3.88 32.60 3770 3770 MS2 14/18 Linfeng_091311_rIgG_4.raw IPI00384444.6 "Keratin, type I cytoskeletal 14" 48.94 17 7 22 273 283.40 38.77 16 100 137.44 32.20 15 48 375.52 37.50 14 125 472 51.5 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 6.21 0.00 0 17 25 3 770.35748 2309.05790 -2.69 27.70 3087 3087 MS2 41/84 Linfeng_091311_rIgG_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 149 5.83 0.00 0 16 25 3 770.36029 2309.06632 0.96 26.59 2521 2521 MS2 40/84 Linfeng_122411_rIgG_6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 5.58 0.00 0 3 25 3 770.35797 2309.05936 -2.06 27.71 3057 3057 MS2 44/84 Linfeng_091311_rIgG_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 141 5.56 0.00 0 6 25 3 770.35822 2309.06009 -1.74 27.56 3097 3097 MS2 43/84 Linfeng_091311_rIgG_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 5.53 0.00 0 15 25 3 770.35785 2309.05899 -2.22 27.64 2841 2841 MS2 41/84 Linfeng_091311_rIgG_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 136 5.53 0.00 0 7 25 3 770.35760 2309.05826 -2.53 27.77 3114 3114 MS2 44/84 Linfeng_091311_rIgG_6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 167 5.28 0.00 0 2 100 2 1155.04504 2309.08281 8.10 29.32 2358 2358 MS2 22/42 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 137 5.08 0.00 0 3 25 3 770.35785 2309.05899 -2.22 27.54 3138 3138 MS2 44/84 Linfeng_091311_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 189 4.96 0.00 0 26 100 3 770.36377 2309.07676 5.48 29.02 2867 2867 MS2 38/84 Linfeng_20120125_PCAF_1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 257 4.92 0.00 0 100 100 2 1043.50366 2086.00005 6.21 37.59 5090 5090 MS2 25/40 Linfeng_20120125_PCAF_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 142 4.89 0.00 0 3 100 2 1155.04443 2309.08159 7.57 29.28 2516 2516 MS2 20/42 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 216 4.77 0.00 0 16 100 3 770.36584 2309.08298 8.17 29.29 2352 2352 MS2 38/84 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 153 4.72 0.00 0 0 100 2 1155.04309 2309.07891 6.41 29.08 2880 2880 MS2 23/42 Linfeng_20120125_PCAF_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 201 4.65 0.00 0 29 100 3 770.36487 2309.08005 6.90 29.66 2441 2441 MS2 37/84 Linfeng_20120125_PCAF_7.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 361 4.63 0.00 1 10 100 3 702.02740 2104.06766 7.56 28.01 2295 2295 MS2 34/72 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 202 4.63 0.00 0 43 100 3 770.36536 2309.08152 7.54 29.22 2673 2673 MS2 38/84 Linfeng_20120125_PCAF_6.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 4.56 0.00 0 16 25 3 685.37823 2054.12015 -1.94 40.56 4768 4768 MS2 38/72 Linfeng_091311_rIgG_6.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 260 4.53 0.00 0 12 100 2 1043.50574 2086.00420 8.20 37.95 4413 4413 MS2 24/40 Linfeng_20120125_PCAF_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 204 4.50 0.00 0 35 100 3 770.36542 2309.08170 7.62 29.54 2516 2516 MS2 37/84 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 199 4.48 0.00 0 19 100 3 770.36456 2309.07914 6.51 28.55 2847 2847 MS2 36/84 Linfeng_20120125_PCAF_5.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 270 4.47 0.00 0 13 100 2 1043.50574 2086.00420 8.20 37.95 4141 4141 MS2 25/40 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 201 4.46 0.00 0 47 100 3 770.36499 2309.08042 7.06 28.94 2460 2460 MS2 39/84 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 196 4.43 0.00 0 31 100 3 770.36517 2309.08097 7.30 29.45 2499 2499 MS2 38/84 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 191 4.39 0.00 0 19 100 3 770.36438 2309.07859 6.27 29.70 2447 2447 MS2 35/84 Linfeng_20120125_PCAF_7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 4.36 0.00 0 0 100 2 1043.50427 2086.00127 6.80 38.00 4143 4143 MS2 26/40 Linfeng_20120125_PCAF_7.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 238 4.36 0.00 0 14 25 3 685.38141 2054.12967 2.69 39.20 3974 3974 MS2 39/72 Linfeng_122411_rIgG_2.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 284 4.34 0.00 0 0 100 2 1043.50549 2086.00371 7.97 37.79 4539 4539 MS2 25/40 Linfeng_20120125_PCAF_6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 197 4.34 0.00 0 14 100 3 770.36517 2309.08097 7.30 29.20 2503 2503 MS2 38/84 Linfeng_20120125_PCAF_2.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 232 4.33 0.00 0 6 25 3 685.38104 2054.12857 2.16 39.31 3967 3967 MS2 39/72 Linfeng_122411_rIgG_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 298 4.29 0.00 0 7 25 3 685.37787 2054.11905 -2.48 40.25 4756 4756 MS2 37/72 Linfeng_091311_rIgG_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 148 4.27 0.00 0 0 100 2 1155.04492 2309.08257 7.99 29.57 2995 2995 MS2 21/42 Linfeng_20120125_PCAF_1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 251 4.27 0.00 0 0 100 2 1043.50488 2086.00249 7.38 38.42 4521 4521 MS2 22/40 Linfeng_20120125_PCAF_4.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 249 4.26 0.00 0 0 100 2 1043.50610 2086.00493 8.55 38.65 4289 4289 MS2 20/40 Linfeng_20120125_PCAF_3.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 272 4.25 0.00 0 4 100 2 1043.50574 2086.00420 8.20 38.42 5134 5134 MS2 25/40 Linfeng_20120125_PCAF_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 202 4.24 0.00 0 36 100 3 770.36481 2309.07987 6.82 29.58 2734 2734 MS2 33/84 Linfeng_20120125_PCAF_6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 201 4.20 0.00 0 42 100 3 770.36505 2309.08060 7.14 29.09 2321 2321 MS2 34/84 Linfeng_20120125_PCAF_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 4.17 0.00 0 29 17 3 685.37732 2054.11740 -3.28 40.32 4559 4559 MS2 38/72 Linfeng_091311_rIgG_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 189 4.15 0.00 0 51 100 3 770.36401 2309.07749 5.79 29.02 2308 2308 MS2 37/84 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 186 4.10 0.00 0 41 100 3 770.36340 2309.07566 5.00 28.97 2463 2463 MS2 36/84 Linfeng_20120125_PCAF_2.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 246 4.06 0.00 0 7 100 2 1043.50476 2086.00224 7.26 37.78 4282 4282 MS2 20/40 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 160 4.01 0.00 0 4 25 3 770.36139 2309.06961 2.38 26.60 2034 2034 MS2 35/84 Linfeng_122411_rIgG_7.raw High DAEEWFFTKTEELNR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 227 4.01 0.00 1 15 25 3 638.96881 1914.89188 2.59 39.19 3567 3567 MS2 31/56 Linfeng_122411_rIgG_7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 275 4.00 0.00 0 0 100 2 1043.50476 2086.00224 7.26 37.75 4529 4529 MS2 23/40 Linfeng_20120125_PCAF_6.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 251 3.99 0.00 0 15 25 3 685.38037 2054.12656 1.18 39.41 3594 3594 MS2 37/72 Linfeng_122411_rIgG_7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 277 3.87 0.00 0 29 100 2 1043.50574 2086.00420 8.20 38.68 4268 4268 MS2 23/40 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 205 3.83 0.00 0 37 100 3 770.36542 2309.08170 7.62 29.73 2552 2552 MS2 38/84 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 200 3.82 0.00 0 80 100 3 770.36469 2309.07950 6.67 29.62 2741 2741 MS2 30/84 Linfeng_20120125_PCAF_6.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 275 3.80 0.00 0 18 25 3 685.37756 2054.11814 -2.92 40.60 4762 4762 MS2 38/72 Linfeng_091311_rIgG_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 189 3.80 0.00 0 28 100 3 770.36407 2309.07767 5.87 29.22 2379 2379 MS2 35/84 Linfeng_20120125_PCAF_7.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 187 3.76 0.00 0 33 100 3 770.36353 2309.07602 5.16 29.01 2471 2471 MS2 38/84 Linfeng_20120125_PCAF_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 373 3.74 0.00 1 13 100 3 702.02783 2104.06894 8.17 27.81 2257 2257 MS2 32/72 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 202 3.69 0.00 0 36 100 3 770.36481 2309.07987 6.82 30.19 2661 2661 MS2 35/84 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 200 3.68 0.00 0 15 100 3 770.36487 2309.08005 6.90 29.37 3034 3034 MS2 34/84 Linfeng_20120125_PCAF_5.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 280 3.65 0.00 0 25 25 3 685.37689 2054.11612 -3.90 40.54 4787 4787 MS2 35/72 Linfeng_091311_rIgG_4.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 287 3.63 0.00 0 32 100 2 1043.50586 2086.00444 8.32 38.06 4153 4153 MS2 21/40 Linfeng_20120125_PCAF_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 188 3.60 0.00 0 41 100 3 770.36371 2309.07657 5.40 28.90 2837 2837 MS2 35/84 Linfeng_20120125_PCAF_1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 265 3.56 0.00 0 5 100 2 1043.50574 2086.00420 8.20 37.88 4560 4560 MS2 22/40 Linfeng_20120125_PCAF_6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 201 3.55 0.00 0 19 100 3 770.36469 2309.07950 6.67 28.46 2826 2826 MS2 34/84 Linfeng_20120125_PCAF_5.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 3.53 0.00 0 19 25 3 685.37750 2054.11795 -3.01 40.63 4765 4765 MS2 37/72 Linfeng_091311_rIgG_7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 285 3.53 0.00 0 0 100 2 1043.50623 2086.00517 8.67 38.34 4408 4408 MS2 20/40 Linfeng_20120125_PCAF_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 197 3.53 0.00 0 40 100 3 770.36517 2309.08097 7.30 29.29 2467 2467 MS2 36/84 Linfeng_20120125_PCAF_9.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 298 3.48 0.00 0 51 25 3 685.37781 2054.11887 -2.57 40.43 4898 4898 MS2 36/72 Linfeng_091311_rIgG_10.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 3.47 0.00 1 11 100 3 702.02704 2104.06656 7.03 28.06 2306 2306 MS2 28/72 Linfeng_20120125_PCAF_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 3.45 0.00 1 3 100 3 702.02704 2104.06656 7.03 27.55 2394 2394 MS2 29/72 Linfeng_20120125_PCAF_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 194 3.34 0.00 0 46 100 3 770.36450 2309.07895 6.43 29.17 2371 2371 MS2 34/84 Linfeng_20120125_PCAF_7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 264 3.31 0.00 0 0 100 2 1043.50256 2085.99785 5.16 38.16 4459 4459 MS2 25/40 Linfeng_20120125_PCAF_4.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 268 3.30 0.00 0 40 100 2 1043.50684 2086.00640 9.25 37.96 4134 4134 MS2 20/40 Linfeng_20120125_PCAF_2.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 286 3.29 0.00 0 21 100 2 1043.50598 2086.00469 8.43 37.63 4948 4948 MS2 21/40 Linfeng_20120125_PCAF_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 189 3.24 0.00 0 50 100 3 770.36395 2309.07730 5.71 29.12 2365 2365 MS2 31/84 Linfeng_20120125_PCAF_7.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 294 3.24 0.00 0 36 25 2 713.35437 1425.70146 3.20 23.70 1757 1757 MS2 20/28 Linfeng_122411_rIgG_7.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 201 3.24 0.00 0 36 100 3 770.36536 2309.08152 7.54 29.10 2482 2482 MS2 32/84 Linfeng_20120125_PCAF_4.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.13 0.00 0 30 25 2 553.78412 1106.56096 -1.23 4.81 544 544 MS2 19/20 Linfeng_122411_rIgG_6.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 257 3.11 0.00 0 41 25 2 713.35016 1425.69304 -2.71 24.90 2767 2767 MS2 19/28 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 276 3.10 0.00 0 38 25 3 685.37762 2054.11832 -2.83 40.54 4848 4848 MS2 32/72 Linfeng_091311_rIgG_8.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 243 3.09 0.00 0 38 25 2 713.35040 1425.69353 -2.37 24.95 2737 2737 MS2 20/28 Linfeng_091311_rIgG_6.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 277 3.08 0.00 0 16 25 3 685.37732 2054.11740 -3.28 40.41 4837 4837 MS2 36/72 Linfeng_091311_rIgG_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 3.07 0.00 1 26 100 3 702.02667 2104.06546 6.51 27.53 2210 2210 MS2 29/72 Linfeng_20120125_PCAF_2.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 300 3.06 0.00 0 38 25 2 713.35388 1425.70049 2.52 22.08 1919 1919 MS2 19/28 Linfeng_122411_rIgG_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 3.02 0.00 0 3 6 2 651.33167 1301.65605 -1.81 4.19 457 457 MS2 19/22 Linfeng_122411_rIgG_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 3.02 0.00 0 6 25 2 639.79468 1278.58208 -2.76 21.33 2269 2269 MS2 21/28 Linfeng_091311_rIgG_2.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 3.00 0.00 0 5 25 2 681.34723 1361.68718 -2.63 21.80 2277 2277 MS2 20/24 Linfeng_091311_rIgG_7.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 280 2.99 0.00 0 28 25 2 713.35303 1425.69878 1.32 23.55 2154 2154 MS2 17/28 Linfeng_122411_rIgG_5.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 2.99 0.00 0 13 25 2 681.34735 1361.68743 -2.45 21.72 2294 2294 MS2 20/24 Linfeng_091311_rIgG_6.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 395 2.99 0.00 1 5 6 3 422.89459 1266.66922 0.27 3.58 361 361 MS2 22/36 Linfeng_122411_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 2.98 0.00 0 13 4 2 651.33118 1301.65508 -2.56 4.10 471 471 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 340 2.94 0.00 0 18 25 2 651.33527 1301.66326 3.72 25.75 1843 1843 MS2 18/22 Linfeng_122411_rIgG_1.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 297 2.92 0.00 0 12 25 2 610.80334 1220.59941 -0.92 3.40 311 311 MS2 17/20 Linfeng_122411_rIgG_9.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.92 0.00 0 10 25 2 681.34717 1361.68706 -2.72 21.41 2280 2280 MS2 19/24 Linfeng_091311_rIgG_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 97 2.90 0.00 0 8 25 2 586.76776 1172.52825 1.98 38.81 3521 3521 MS2 13/16 Linfeng_122411_rIgG_7.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.90 0.00 0 36 25 2 639.79510 1278.58293 -2.09 21.41 2244 2244 MS2 21/28 Linfeng_091311_rIgG_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 2.90 0.00 0 33 25 2 639.79437 1278.58147 -3.24 21.52 2221 2221 MS2 21/28 Linfeng_091311_rIgG_5.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 2.89 0.00 0 27 25 2 713.35016 1425.69304 -2.71 24.66 2705 2705 MS2 19/28 Linfeng_091311_rIgG_3.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 367 2.89 0.00 1 14 23 3 422.89301 1266.66446 -3.49 24.78 2456 2456 MS2 22/36 Linfeng_091311_rIgG_1.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 255 2.88 0.00 0 42 25 2 713.34937 1425.69145 -3.82 24.61 2733 2733 MS2 18/28 Linfeng_091311_rIgG_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 2.87 0.00 0 29 25 2 713.34979 1425.69231 -3.22 24.58 2429 2429 MS2 19/28 Linfeng_091311_rIgG_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 380 2.87 0.00 1 3 25 3 422.89343 1266.66574 -2.48 25.11 2704 2704 MS2 23/36 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 346 2.85 0.00 0 4 25 2 651.33386 1301.66045 1.56 25.38 2359 2359 MS2 19/22 Linfeng_122411_rIgG_6.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 360 2.85 0.00 0 9 25 2 681.34778 1361.68828 -1.82 21.55 2263 2263 MS2 19/24 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.84 0.00 0 1 25 2 681.34705 1361.68682 -2.90 21.69 2254 2254 MS2 20/24 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.83 0.00 1 4 100 2 690.37207 1379.73686 6.57 36.42 3797 3797 MS2 15/20 Linfeng_20120125_PCAF_3.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 277 2.83 0.00 0 38 25 2 713.35016 1425.69304 -2.71 24.88 2700 2700 MS2 19/28 Linfeng_091311_rIgG_9.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 101 2.81 0.00 0 10 25 2 586.76746 1172.52764 1.46 39.10 3961 3961 MS2 13/16 Linfeng_122411_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 161 2.81 0.00 0 20 25 3 770.36145 2309.06980 2.46 26.64 2354 2354 MS2 28/84 Linfeng_122411_rIgG_2.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 381 2.79 0.00 1 5 19 3 422.89328 1266.66529 -2.84 24.87 2769 2769 MS2 20/36 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 6 25 2 651.33063 1301.65398 -3.41 27.08 2999 2999 MS2 19/22 Linfeng_091311_rIgG_7.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 245 2.77 0.00 0 40 25 2 713.35046 1425.69365 -2.28 24.85 2668 2668 MS2 17/28 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 20 25 2 651.33459 1301.66191 2.69 20.48 1702 1702 MS2 17/22 Linfeng_122411_rIgG_4.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 262 2.76 0.00 0 6 100 2 1043.50488 2086.00249 7.38 38.23 4643 4643 MS2 19/40 Linfeng_20120125_PCAF_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 20 25 2 651.33075 1301.65422 -3.22 27.05 3018 3018 MS2 19/22 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.75 0.00 1 1 100 2 690.37219 1379.73711 6.75 36.06 3719 3719 MS2 16/20 Linfeng_20120125_PCAF_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 324 2.75 0.00 1 28 100 2 593.35492 1185.70256 6.33 41.42 4792 4792 MS2 14/18 Linfeng_20120125_PCAF_2.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 365 2.74 0.00 0 21 25 2 681.34790 1361.68852 -1.64 21.53 2267 2267 MS2 18/24 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 101 2.73 0.00 0 10 25 2 586.76764 1172.52800 1.77 38.96 3923 3923 MS2 14/16 Linfeng_122411_rIgG_3.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 256 2.73 0.00 0 54 25 2 713.34998 1425.69267 -2.96 24.95 2711 2711 MS2 18/28 Linfeng_091311_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 651.33057 1301.65386 -3.50 26.83 2996 2996 MS2 19/22 Linfeng_091311_rIgG_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 17 25 2 639.79437 1278.58147 -3.24 21.53 2231 2231 MS2 22/28 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 390 2.66 0.00 0 12 100 2 651.33771 1301.66814 7.47 27.14 2096 2096 MS2 18/22 Linfeng_20120125_PCAF_9.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 268 2.65 0.00 0 33 25 2 713.35028 1425.69328 -2.54 24.68 2700 2700 MS2 16/28 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 2.65 0.00 0 7 25 2 681.34723 1361.68718 -2.63 20.04 1805 1805 MS2 19/24 Linfeng_091311_rIgG_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 404 2.64 0.00 1 27 100 3 460.58389 1379.73713 6.76 35.73 4487 4487 MS2 23/40 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 344 2.64 0.00 0 31 25 2 651.33484 1301.66240 3.07 25.70 1945 1945 MS2 18/22 Linfeng_122411_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 338 2.63 0.00 0 25 100 2 651.33704 1301.66680 6.44 24.70 1661 1661 MS2 17/22 Linfeng_20120125_PCAF_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 79 2.63 0.00 0 9 25 2 586.76508 1172.52287 -2.60 40.31 4725 4725 MS2 14/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 488 2.61 0.00 0 5 100 2 515.30438 1029.60149 7.33 37.04 3939 3939 MS2 15/16 Linfeng_20120125_PCAF_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.60 0.00 0 5 25 2 651.33014 1301.65300 -4.16 27.05 2997 2997 MS2 19/22 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.59 0.00 0 11 25 2 610.80072 1220.59416 -5.22 25.93 2871 2871 MS2 15/20 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 394 2.57 0.00 0 22 25 2 651.33234 1301.65740 -0.78 25.57 2427 2427 MS2 18/22 Linfeng_122411_rIgG_5.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 2.57 0.00 0 9 25 2 639.79535 1278.58342 -1.71 21.35 2244 2244 MS2 21/28 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 2.57 0.00 0 19 25 2 639.79492 1278.58257 -2.38 21.63 2282 2282 MS2 20/28 Linfeng_091311_rIgG_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 378 2.56 0.00 0 26 25 2 651.33429 1301.66130 2.22 25.71 2229 2229 MS2 18/22 Linfeng_122411_rIgG_2.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 380 2.56 0.00 1 32 25 3 422.89383 1266.66693 -1.54 24.86 2733 2733 MS2 22/36 Linfeng_091311_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 303 2.55 0.00 0 3 25 2 651.33014 1301.65300 -4.16 26.78 3033 3033 MS2 19/22 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 318 2.54 0.00 0 10 12 2 651.33173 1301.65618 -1.72 4.31 474 474 MS2 19/22 Linfeng_122411_rIgG_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 209 2.54 0.00 0 0 4 2 1027.56775 2054.12822 1.99 48.58 7591 7591 MS2 13/36 Linfeng_20120125_PCAF_1.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 310 2.53 0.00 0 41 100 2 713.35675 1425.70622 6.54 23.91 1719 1719 MS2 17/28 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 383 2.52 0.00 1 6 25 3 422.89331 1266.66538 -2.77 25.17 2742 2742 MS2 23/36 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 364 2.52 0.00 0 23 25 2 651.33282 1301.65837 -0.03 25.78 2164 2164 MS2 17/22 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 385 2.51 0.00 1 17 25 3 422.89352 1266.66602 -2.26 25.18 2768 2768 MS2 21/36 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.50 0.00 1 13 100 2 690.37152 1379.73577 5.77 36.52 3851 3851 MS2 15/20 Linfeng_20120125_PCAF_2.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 270 2.50 0.00 0 48 100 2 1043.50647 2086.00566 8.90 37.86 4122 4122 MS2 20/40 Linfeng_20120125_PCAF_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 293 2.50 0.00 0 25 25 2 651.33051 1301.65373 -3.59 26.95 2953 2953 MS2 19/22 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 409 2.49 0.00 0 26 100 2 651.33752 1301.66777 7.19 24.53 1646 1646 MS2 15/22 Linfeng_20120125_PCAF_9.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 334 2.48 0.00 1 24 100 2 593.35553 1185.70378 7.36 41.29 4766 4766 MS2 13/18 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.46 0.00 1 0 100 2 690.37231 1379.73735 6.92 35.59 3613 3613 MS2 15/20 Linfeng_20120125_PCAF_3.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.45 0.00 0 19 25 2 610.80090 1220.59453 -4.92 25.92 2878 2878 MS2 15/20 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 379 2.43 0.00 1 12 100 2 690.37231 1379.73735 6.92 35.43 3651 3651 MS2 14/20 Linfeng_20120125_PCAF_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 78 2.43 0.00 0 24 25 2 586.76495 1172.52263 -2.81 40.14 4737 4737 MS2 13/16 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 308 2.42 0.00 0 15 25 2 651.33057 1301.65386 -3.50 26.92 3105 3105 MS2 19/22 Linfeng_091311_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 303 2.42 0.00 0 23 25 2 651.33026 1301.65325 -3.97 26.68 2984 2984 MS2 19/22 Linfeng_091311_rIgG_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 67 2.42 0.00 0 9 25 2 586.76532 1172.52336 -2.18 40.23 4727 4727 MS2 13/16 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 309 2.41 0.00 0 5 25 2 610.80035 1220.59343 -5.82 26.19 2904 2904 MS2 17/20 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 372 2.41 0.00 1 12 100 2 690.37140 1379.73552 5.60 36.68 3885 3885 MS2 13/20 Linfeng_20120125_PCAF_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 72 2.41 0.00 0 11 25 2 586.76508 1172.52287 -2.60 40.21 4697 4697 MS2 13/16 Linfeng_091311_rIgG_5.raw Medium LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 140 2.40 0.00 0 22 16 3 770.35858 2309.06119 -1.26 4.26 468 468 MS2 36/84 Linfeng_122411_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw Medium ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 239 2.39 0.00 0 14 25 3 685.38116 2054.12894 2.34 39.27 4096 4096 MS2 21/72 Linfeng_122411_rIgG_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.39 0.00 1 25 100 2 690.37201 1379.73674 6.48 35.31 4387 4387 MS2 15/20 Linfeng_20120125_PCAF_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 411 2.39 0.00 0 21 100 2 651.33777 1301.66826 7.57 25.16 1857 1857 MS2 17/22 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.37 0.00 1 63 100 3 460.58411 1379.73777 7.22 36.22 3795 3795 MS2 19/40 Linfeng_20120125_PCAF_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 291 2.37 0.00 0 58 25 2 610.80304 1220.59880 -1.42 25.77 2584 2584 MS2 16/20 Linfeng_091311_rIgG_1.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 111 2.37 0.00 0 26 100 2 586.76941 1172.53154 4.79 48.31 6363 6363 MS2 13/16 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 355 2.36 0.00 1 9 100 2 690.37183 1379.73638 6.21 35.61 4035 4035 MS2 13/20 Linfeng_20120125_PCAF_6.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 77 2.36 0.00 0 13 25 2 586.76544 1172.52361 -1.97 40.06 4794 4794 MS2 13/16 Linfeng_091311_rIgG_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 76 2.32 0.00 0 54 25 2 586.76477 1172.52226 -3.12 40.21 4714 4714 MS2 13/16 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 70 25 2 651.32861 1301.64995 -6.50 27.21 3055 3055 MS2 15/22 Linfeng_091311_rIgG_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 68 2.31 0.00 0 21 25 2 586.76538 1172.52349 -2.08 40.03 4728 4728 MS2 13/16 Linfeng_091311_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 371 2.31 0.00 1 4 100 2 690.37256 1379.73784 7.28 36.41 3960 3960 MS2 14/20 Linfeng_20120125_PCAF_9.raw High ILNEMRDQYEK Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 322 2.31 0.00 1 4 100 2 719.85785 1438.70842 6.17 21.88 1548 1548 MS2 14/20 Linfeng_20120125_PCAF_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 96 2.30 0.00 0 10 18 2 586.76636 1172.52544 -0.41 39.13 4290 4290 MS2 14/16 Linfeng_122411_rIgG_5.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.29 0.00 0 24 25 2 639.79449 1278.58171 -3.04 21.68 2260 2260 MS2 20/28 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 345 2.29 0.00 0 20 100 2 651.33673 1301.66619 5.97 27.64 2639 2639 MS2 16/22 Linfeng_20120125_PCAF_5.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 43 100 3 460.58365 1379.73639 6.23 35.93 4536 4536 MS2 16/40 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.25 0.00 0 13 25 2 610.80060 1220.59392 -5.42 25.83 2902 2902 MS2 17/20 Linfeng_091311_rIgG_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 282 2.25 0.00 0 35 25 2 610.80206 1220.59685 -3.02 26.01 2854 2854 MS2 16/20 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.24 0.00 1 26 100 2 690.37262 1379.73796 7.36 35.53 4016 4016 MS2 13/20 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.24 0.00 0 27 25 2 639.79425 1278.58122 -3.43 21.61 2318 2318 MS2 21/28 Linfeng_091311_rIgG_8.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.24 0.00 0 41 25 2 610.80115 1220.59502 -4.52 26.18 2875 2875 MS2 16/20 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.23 0.00 1 15 100 2 532.81219 1064.61711 6.76 23.08 1526 1526 MS2 14/16 Linfeng_20120125_PCAF_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 380 2.22 0.00 1 2 100 2 690.37244 1379.73760 7.10 35.64 3625 3625 MS2 15/20 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 509 2.22 0.00 0 3 66 2 515.30414 1029.60100 6.86 37.00 3951 3951 MS2 15/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 341 2.21 0.00 0 37 100 2 651.33667 1301.66606 5.88 28.98 2467 2467 MS2 13/22 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 253 2.21 0.00 1 5 100 2 532.81219 1064.61711 6.76 24.65 1757 1757 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 339 2.20 0.00 0 15 100 2 651.33667 1301.66606 5.88 27.31 2090 2090 MS2 16/22 Linfeng_20120125_PCAF_7.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.20 0.00 0 27 25 2 553.78314 1106.55901 -3.00 23.20 2467 2467 MS2 19/20 Linfeng_091311_rIgG_9.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 112 2.20 0.00 0 31 100 2 586.77045 1172.53362 6.56 48.16 6517 6517 MS2 13/16 Linfeng_20120125_PCAF_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 362 2.19 0.00 1 20 100 2 690.37177 1379.73625 6.13 34.43 4322 4322 MS2 14/20 Linfeng_20120125_PCAF_5.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.17 0.00 1 3 100 2 633.84167 1266.67607 5.68 25.30 1878 1878 MS2 15/18 Linfeng_20120125_PCAF_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 110 2.17 0.00 0 45 100 2 586.77148 1172.53569 8.33 48.24 7050 7050 MS2 13/16 Linfeng_20120125_PCAF_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 343 2.17 0.00 0 21 100 2 651.33673 1301.66619 5.97 27.19 2149 2149 MS2 17/22 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 260 2.17 0.00 1 4 98 2 532.81287 1064.61846 8.03 24.50 1780 1780 MS2 14/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 333 2.16 0.00 0 18 100 2 651.33740 1301.66753 7.00 27.14 2315 2315 MS2 18/22 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 524 2.16 0.00 0 12 100 2 515.30396 1029.60063 6.50 37.02 4799 4799 MS2 15/16 Linfeng_20120125_PCAF_1.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 103 2.16 0.00 0 26 25 2 586.76752 1172.52776 1.57 39.36 3911 3911 MS2 13/16 Linfeng_122411_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.16 0.00 1 37 100 2 690.37134 1379.73540 5.51 36.33 4632 4632 MS2 13/20 Linfeng_20120125_PCAF_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 312 2.15 0.00 1 1 100 2 633.84180 1266.67632 5.87 25.23 1867 1867 MS2 15/18 Linfeng_20120125_PCAF_2.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.15 0.00 0 48 25 2 639.79504 1278.58281 -2.19 19.47 1727 1727 MS2 20/28 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 255 2.15 0.00 1 3 100 2 532.81250 1064.61772 7.34 24.73 1765 1765 MS2 14/16 Linfeng_20120125_PCAF_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 398 2.14 0.00 1 25 100 2 690.37219 1379.73711 6.75 35.10 4337 4337 MS2 12/20 Linfeng_20120125_PCAF_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 323 2.14 0.00 1 25 100 2 633.84186 1266.67644 5.97 25.34 1821 1821 MS2 14/18 Linfeng_20120125_PCAF_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 343 2.14 0.00 0 9 100 2 651.33582 1301.66435 4.57 27.24 2542 2542 MS2 18/22 Linfeng_20120125_PCAF_5.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 344 2.13 0.00 1 33 100 2 593.35608 1185.70488 8.28 41.20 4749 4749 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.13 0.00 1 4 100 2 532.81171 1064.61614 5.85 24.51 1743 1743 MS2 14/16 Linfeng_20120125_PCAF_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 578 2.13 0.00 0 39 100 2 515.30377 1029.60027 6.14 36.20 3741 3741 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 416 2.13 0.00 0 38 100 2 651.33765 1301.66802 7.38 25.19 1711 1711 MS2 16/22 Linfeng_20120125_PCAF_3.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 340 2.11 0.00 1 7 100 2 633.84271 1266.67815 7.32 24.73 1884 1884 MS2 15/18 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 563 2.11 0.00 0 29 100 2 515.30328 1029.59929 5.20 37.84 4111 4111 MS2 14/16 Linfeng_20120125_PCAF_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 408 2.11 0.00 0 22 100 2 651.33752 1301.66777 7.19 26.17 1993 1993 MS2 15/22 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 530 2.10 0.00 0 16 100 2 515.30396 1029.60063 6.50 36.70 4029 4029 MS2 15/16 Linfeng_20120125_PCAF_9.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 259 2.10 0.00 1 21 100 2 532.81287 1064.61846 8.03 24.23 1795 1795 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 386 2.09 0.00 1 5 100 2 633.84302 1266.67876 7.80 23.72 1713 1713 MS2 15/18 Linfeng_20120125_PCAF_1.raw High NHEEEMNALR Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 55 2.08 0.00 0 7 25 2 621.77930 1242.55132 -1.53 20.04 2019 2019 MS2 13/18 Linfeng_091311_rIgG_5.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 345 2.08 0.00 0 8 100 2 545.77240 1090.53752 5.96 21.28 1421 1421 MS2 14/16 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 382 2.08 0.00 1 5 100 2 690.37201 1379.73674 6.48 35.56 3866 3866 MS2 13/20 Linfeng_20120125_PCAF_4.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.08 0.00 0 57 25 2 610.80389 1220.60051 -0.02 24.24 2203 2203 MS2 15/20 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 350 2.07 0.00 0 69 100 2 651.33643 1301.66557 5.50 26.25 2205 2205 MS2 16/22 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.06 0.00 1 23 100 2 690.37195 1379.73662 6.39 35.04 4322 4322 MS2 12/20 Linfeng_20120125_PCAF_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 349 2.06 0.00 0 42 100 2 651.33661 1301.66594 5.78 24.75 1913 1913 MS2 14/22 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.05 0.00 1 24 100 2 532.81268 1064.61809 7.68 23.42 1525 1525 MS2 14/16 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.05 0.00 1 4 32 2 532.81201 1064.61675 6.42 24.00 1820 1820 MS2 15/16 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 266 2.05 0.00 1 9 100 2 532.81177 1064.61626 5.96 23.83 1864 1864 MS2 14/16 Linfeng_20120125_PCAF_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 384 2.04 0.00 0 8 100 2 651.33759 1301.66789 7.29 26.99 2486 2486 MS2 14/22 Linfeng_20120125_PCAF_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 409 2.03 0.00 0 4 100 2 651.33752 1301.66777 7.19 27.25 2139 2139 MS2 17/22 Linfeng_20120125_PCAF_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 329 2.03 0.00 0 42 100 2 651.33679 1301.66631 6.07 24.55 1853 1853 MS2 16/22 Linfeng_20120125_PCAF_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 414 2.02 0.00 0 37 100 2 651.33752 1301.66777 7.19 24.56 1642 1642 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 122 2.02 0.00 0 22 100 2 586.77026 1172.53325 6.25 48.26 6735 6735 MS2 13/16 Linfeng_20120125_PCAF_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 322 2.01 0.00 0 26 100 2 651.33716 1301.66704 6.63 27.18 1997 1997 MS2 17/22 Linfeng_20120125_PCAF_3.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 7 5 IPI00009865.4;IPI00217963.3;IPI00328103.4;IPI00384444.6;IPI00375911.2 CID 1.0000 0.0000 1 1 356 2.01 0.00 0 0 100 2 545.77197 1090.53667 5.18 20.83 1549 1549 MS2 14/16 Linfeng_20120125_PCAF_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 409 2.01 0.00 1 45 100 2 690.37085 1379.73442 4.80 36.41 4652 4652 MS2 14/20 Linfeng_20120125_PCAF_1.raw IPI00385042.4 Nucleolar GTP-binding protein 1 22.56 2 11 11 16 29.92 22.56 11 11 12.96 8.52 5 5 634 73.9 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFTDLQSEGFPVIETSTLTEEGVIK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 305 4.83 0.00 0 35 25 3 918.47662 2753.41532 0.75 45.82 5452 5452 MS2 43/96 Linfeng_091311_rIgG_4.raw High KLEELEKEEELR Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 488 3.36 0.00 2 16 25 3 515.60889 1544.81211 -2.98 24.47 2672 2672 MS2 24/44 Linfeng_091311_rIgG_4.raw High ADVDVQPYAFTTK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 262 3.14 0.00 0 21 25 2 727.86328 1454.71929 2.09 30.43 2972 2972 MS2 18/24 Linfeng_122411_rIgG_4.raw High TLLLcGYPNVGK Unambiguous 2 1 IPI00385042.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.85 0.00 0 14 25 2 667.86182 1334.71636 1.96 33.17 3327 3327 MS2 19/22 Linfeng_122411_rIgG_4.raw High ADVDVQPYAFTTK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 232 2.82 0.00 0 22 25 2 727.86041 1454.71355 -1.85 31.82 3667 3667 MS2 18/24 Linfeng_091311_rIgG_4.raw High IAELSEDDQK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 268 2.76 0.00 0 5 25 2 574.27618 1147.54509 -2.34 20.69 2145 2145 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLLLcGYPNVGK Unambiguous 2 1 IPI00385042.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.63 0.00 0 45 25 2 667.85907 1334.71086 -2.15 34.44 4008 4008 MS2 19/22 Linfeng_091311_rIgG_4.raw Medium DDKERPPFIPEGVVAR Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 346 2.46 0.00 1 28 25 3 608.99054 1824.95707 -1.82 31.90 3677 3677 MS2 30/60 Linfeng_091311_rIgG_4.raw High DFIDLTLSK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 357 2.45 0.00 0 6 25 2 526.28845 1051.56963 2.45 38.65 4019 4019 MS2 14/16 Linfeng_122411_rIgG_4.raw High FTQQNYHDR Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 131 2.40 0.00 0 6 25 2 604.77490 1208.54253 -1.49 15.34 1388 1388 MS2 14/16 Linfeng_091311_rIgG_4.raw High LSQILTDFPK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 381 2.34 0.00 0 32 25 2 581.32526 1161.64324 -7.07 35.14 4099 4099 MS2 16/18 Linfeng_091311_rIgG_4.raw High LALGQINIAK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 149 2.32 0.00 0 19 25 2 520.82800 1040.64873 2.32 31.73 3141 3141 MS2 16/18 Linfeng_122411_rIgG_4.raw Medium WQVVDTPGILDHPLEDR Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 359 2.28 0.00 0 9 25 3 664.00470 1989.99955 -1.72 38.09 4477 4477 MS2 35/64 Linfeng_091311_rIgG_4.raw High IAELSEDDQK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 368 2.20 0.00 0 10 25 2 574.28131 1147.55535 6.59 3.12 308 308 MS2 15/18 Linfeng_122411_rIgG_4.raw High DFIDLTLSK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 294 2.01 0.00 0 12 25 2 526.28558 1051.56389 -3.01 39.89 4705 4705 MS2 12/16 Linfeng_091311_rIgG_4.raw High LALGQINIAK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 115 2.01 0.00 0 16 25 2 520.82544 1040.64360 -2.60 33.18 3846 3846 MS2 16/18 Linfeng_091311_rIgG_4.raw IPI00394982.1 probable ATP-dependent RNA helicase DDX52 isoform b 18.33 2 5 5 7 23.68 18.33 5 7 0.00 491 55.2 9.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NSAVETVEQELLFVGSETGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 328 5.09 0.00 0 19 25 3 713.02563 2137.06235 -1.72 48.19 5751 5751 MS2 33/76 Linfeng_091311_rIgG_4.raw High IHVQGTDLPDPIATFQQLDQEYK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 323 4.45 0.00 0 8 25 3 886.11188 2656.32108 -1.63 44.24 5252 5252 MS2 32/88 Linfeng_091311_rIgG_4.raw High NSAVETVEQELLFVGSETGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 320 4.15 0.00 0 38 25 3 713.02618 2137.06400 -0.95 48.55 5760 5760 MS2 32/76 Linfeng_091311_rIgG_7.raw High GFNPPVLVFVQSIER Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 285 2.76 0.00 0 55 25 2 851.46930 1701.93132 -0.60 50.03 5984 5984 MS2 19/28 Linfeng_091311_rIgG_4.raw High GFNPPVLVFVQSIER Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 311 2.75 0.00 0 0 25 3 567.98206 1701.93161 -0.43 49.65 5936 5936 MS2 25/56 Linfeng_091311_rIgG_4.raw Medium GVNLVINYDFPTSSVEYIHR Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 350 2.32 0.00 0 27 25 3 775.05969 2323.16452 -3.13 39.93 4710 4710 MS2 26/76 Linfeng_091311_rIgG_4.raw High ELLASAPTGSGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 539 2.17 0.00 0 27 25 2 565.80420 1130.60112 -3.64 23.73 2570 2570 MS2 14/22 Linfeng_091311_rIgG_4.raw IPI00396435.3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 21.51 1 11 11 26 31.82 14.34 7 10 15.39 6.16 4 5 27.24 14.09 8 11 795 90.9 7.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FAHIDGDHLTLLNVYHAFK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 370 4.16 0.00 0 12 25 4 553.53674 2211.12514 -4.29 37.83 4450 4450 MS2 39/108 Linfeng_091311_rIgG_3.raw High FQIYFDNcPLLTIPGR Unambiguous 1 1 IPI00396435.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 287 3.78 0.00 0 42 25 2 977.49969 1953.99211 1.49 46.84 5582 5582 MS2 18/30 Linfeng_091311_rIgG_3.raw High DNQVVQLHPSTVLDHKPEWVLYNEFVLTTK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 202 3.68 0.00 0 9 25 5 710.77289 3549.83533 -0.69 42.48 5036 5036 MS2 51/232 Linfeng_091311_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 291 3.51 0.00 0 7 25 2 693.34375 1385.68022 0.49 29.87 2753 2753 MS2 19/24 Linfeng_122411_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 290 3.41 0.00 0 22 25 2 693.34167 1385.67607 -2.51 31.19 3592 3592 MS2 19/24 Linfeng_091311_rIgG_3.raw High IAPQYYDMSNFPQcEAK Unambiguous 1 1 IPI00396435.3 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 85 3.10 0.00 0 13 100 2 1031.46362 2061.91997 7.48 37.45 4032 4032 MS2 20/32 Linfeng_20120125_PCAF_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 389 3.03 0.00 0 22 25 3 472.24786 1414.72904 -2.49 30.99 3566 3566 MS2 24/44 Linfeng_091311_rIgG_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 349 3.03 0.00 0 6 25 2 579.34680 1157.68633 -2.22 34.31 3328 3328 MS2 17/20 Linfeng_122411_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 400 3.01 0.00 0 7 25 3 472.24963 1414.73435 1.26 29.63 2721 2721 MS2 27/44 Linfeng_122411_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 405 3.00 0.00 0 25 25 3 472.25000 1414.73545 2.04 29.69 2875 2875 MS2 22/44 Linfeng_122411_rIgG_4.raw Medium FAHIDGDHLTLLNVYHAFK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 368 2.95 0.00 0 2 25 5 443.03110 2211.12638 -3.73 37.81 4448 4448 MS2 46/144 Linfeng_091311_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 382 2.95 0.00 0 18 25 3 472.24802 1414.72950 -2.17 31.12 3575 3575 MS2 24/44 Linfeng_091311_rIgG_4.raw High IIPLYSTLPPQQQQR Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 173 2.87 0.00 0 38 100 2 891.50616 1782.00505 7.94 40.44 4675 4675 MS2 15/28 Linfeng_20120125_PCAF_3.raw High IRVESLLVTAISK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 56 2.83 0.00 1 10 25 3 476.96518 1428.88099 1.73 36.57 3615 3615 MS2 24/48 Linfeng_122411_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 339 2.78 0.00 0 15 100 2 693.34711 1385.68694 5.33 33.02 3055 3055 MS2 16/24 Linfeng_20120125_PCAF_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 364 2.77 0.00 0 5 22 2 579.34485 1157.68242 -5.60 35.35 4135 4135 MS2 17/20 Linfeng_091311_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 317 2.63 0.00 0 8 100 2 693.34760 1385.68791 6.03 33.21 3329 3329 MS2 17/24 Linfeng_20120125_PCAF_4.raw High IRVESLLVTAISK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 57 2.57 0.00 1 4 25 3 476.96286 1428.87403 -3.14 37.12 4361 4361 MS2 25/48 Linfeng_091311_rIgG_3.raw High FQIYFDNcPLLTIPGR Unambiguous 1 1 IPI00396435.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.52 0.00 0 12 25 3 652.00104 1953.98856 -0.33 46.65 5558 5558 MS2 25/60 Linfeng_091311_rIgG_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 282 2.45 0.00 0 8 100 2 579.35205 1157.69682 6.84 44.61 5666 5666 MS2 16/20 Linfeng_20120125_PCAF_3.raw High TEMQDNTYPEILR Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 272 2.39 0.00 0 25 100 2 805.38690 1609.76653 8.58 37.53 4049 4049 MS2 16/24 Linfeng_20120125_PCAF_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 263 2.36 0.00 0 39 100 2 579.35132 1157.69536 5.58 44.63 5984 5984 MS2 14/20 Linfeng_20120125_PCAF_4.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 274 2.31 0.00 0 9 100 2 579.35199 1157.69670 6.74 44.48 5634 5634 MS2 17/20 Linfeng_20120125_PCAF_3.raw Medium FAHIDGDHLTLLNVYHAFK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 387 2.27 0.00 0 18 100 3 737.71179 2211.12082 -6.24 41.28 5183 5183 MS2 14/72 Linfeng_20120125_PCAF_4.raw High TcTDIKPEWLVK Unambiguous 1 1 IPI00396435.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 455 2.05 0.00 0 60 100 2 745.39435 1489.78142 6.33 38.89 4342 4342 MS2 12/22 Linfeng_20120125_PCAF_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 404 2.02 0.00 0 31 100 2 707.87579 1414.74431 8.30 38.42 4241 4241 MS2 16/22 Linfeng_20120125_PCAF_3.raw IPI00396485.3 Elongation factor 1-alpha 1 7.58 2 3 3 17 0.00 43.41 7.58 3 17 0.00 462 50.1 9.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EHALLAYTLGVK Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 451 3.58 0.00 0 6 16 3 438.91837 1314.74054 -0.85 31.79 3279 3279 MS2 26/44 Linfeng_122411_rIgG_5.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 438 2.89 0.00 0 7 25 3 468.91263 1404.72333 -2.66 28.02 2762 2762 MS2 25/44 Linfeng_122411_rIgG_5.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 491 2.71 0.00 0 11 25 3 468.91437 1404.72855 1.06 29.41 2896 2896 MS2 18/44 Linfeng_122411_rIgG_6.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 128 2.70 0.00 0 15 25 2 513.30890 1025.61052 0.24 26.55 2515 2515 MS2 16/20 Linfeng_122411_rIgG_6.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 477 2.69 0.00 0 35 25 3 468.91455 1404.72910 1.45 28.01 2453 2453 MS2 25/44 Linfeng_122411_rIgG_8.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 174 2.68 0.00 0 10 25 2 513.30969 1025.61211 1.79 19.56 1669 1669 MS2 17/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 183 2.53 0.00 0 14 25 2 513.30957 1025.61186 1.55 21.62 1912 1912 MS2 16/20 Linfeng_122411_rIgG_5.raw Medium YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 438 2.47 0.00 0 49 25 3 468.91507 1404.73066 2.56 26.58 2104 2104 MS2 23/44 Linfeng_122411_rIgG_9.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 175 2.44 0.00 0 34 25 2 513.30957 1025.61186 1.55 25.31 2292 2292 MS2 16/20 Linfeng_122411_rIgG_4.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 183 2.41 0.00 0 12 25 2 513.30969 1025.61211 1.79 20.59 1789 1789 MS2 16/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 188 2.41 0.00 0 25 25 2 513.30994 1025.61260 2.27 18.55 1559 1559 MS2 15/20 Linfeng_122411_rIgG_5.raw Medium EHALLAYTLGVK Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 437 2.40 0.00 0 17 25 3 438.91931 1314.74338 1.31 32.41 3286 3286 MS2 16/44 Linfeng_122411_rIgG_6.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 169 2.40 0.00 0 16 25 2 513.31030 1025.61333 2.98 16.53 1362 1362 MS2 14/20 Linfeng_122411_rIgG_5.raw Medium YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 439 2.39 0.00 0 23 25 3 468.91473 1404.72965 1.84 28.95 2633 2633 MS2 17/44 Linfeng_122411_rIgG_3.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 157 2.33 0.00 0 14 14 2 513.30817 1025.60906 -1.18 4.70 569 569 MS2 16/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 175 2.31 0.00 0 19 25 2 513.31024 1025.61321 2.86 17.53 1455 1455 MS2 14/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 185 2.07 0.00 0 49 25 2 513.31018 1025.61308 2.74 15.51 1278 1278 MS2 15/20 Linfeng_122411_rIgG_5.raw IPI00397904.6 Nuclear pore complex protein Nup93 14.16 2 10 10 10 27.31 14.16 10 10 819 93.4 5.72 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LESLSAATTFEPLEPVKDTDIQGFLK Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 270 4.11 0.00 1 7 25 3 950.49829 2849.48032 -0.60 43.49 5162 5162 MS2 33/100 Linfeng_091311_rIgG_3.raw High LNQVcFDDDGTSSPQDR Unambiguous 2 1 IPI00397904.6 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.01 0.00 0 5 25 2 977.41364 1953.81999 -2.25 27.29 3066 3066 MS2 22/32 Linfeng_091311_rIgG_3.raw High NLQEIQQAGER Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 314 3.20 0.00 0 38 25 2 643.32678 1285.64629 -2.55 23.58 2554 2554 MS2 17/20 Linfeng_091311_rIgG_3.raw High EALQYFYFLR Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 457 2.78 0.00 0 7 25 2 675.34668 1349.68608 -2.07 44.16 5246 5246 MS2 16/18 Linfeng_091311_rIgG_3.raw Medium AQHQLGEFK Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 325 2.41 0.00 0 20 25 3 353.18521 1057.54108 -1.40 19.81 2032 2032 MS2 18/32 Linfeng_091311_rIgG_3.raw High TSQETADVK Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 280 2.38 0.00 0 20 25 2 489.73981 978.47234 -1.57 2.98 282 282 MS2 13/16 Linfeng_091311_rIgG_3.raw High AFDIIER Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 358 2.23 0.00 0 22 25 2 432.23392 863.46056 -1.89 30.78 3538 3538 MS2 11/12 Linfeng_091311_rIgG_3.raw High AVYcIIGR Unambiguous 2 1 IPI00397904.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.08 0.00 0 19 25 2 476.25647 951.50566 -2.55 29.14 3318 3318 MS2 13/14 Linfeng_091311_rIgG_3.raw High ASVLLGSR Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 626 2.08 0.00 0 14 25 2 401.74130 802.47533 -3.54 24.02 2614 2614 MS2 12/14 Linfeng_091311_rIgG_3.raw High QALAYLEQSYK Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 270 2.02 0.00 0 20 25 2 657.33893 1313.67058 -2.32 31.59 3646 3646 MS2 13/20 Linfeng_091311_rIgG_3.raw IPI00398625.5 Hornerin 17.58 1 11 11 30 95.75 17.58 11 30 2850 282.2 10.04 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 27 5.48 0.00 0 9 25 3 783.66064 2348.96738 -3.81 24.14 2627 2627 MS2 38/92 Linfeng_091311_rIgG_4.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 27 4.91 0.00 0 8 25 3 783.66125 2348.96921 -3.03 24.03 2352 2352 MS2 37/92 Linfeng_091311_rIgG_1.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 55 4.51 0.00 0 1 25 3 603.59045 1808.75681 1.39 2.51 207 207 MS2 32/72 Linfeng_091311_rIgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 4.30 0.00 0 9 25 4 620.01038 2477.01967 -0.54 14.88 1350 1350 MS2 39/150 Linfeng_091311_rIgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 4.17 0.00 0 1 25 4 620.01062 2477.02065 -0.14 14.54 1286 1286 MS2 43/150 Linfeng_091311_rIgG_3.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 53 4.03 0.00 0 12 25 3 603.58990 1808.75516 0.48 2.49 204 204 MS2 34/72 Linfeng_091311_rIgG_2.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 52 3.73 0.00 0 2 25 3 603.59027 1808.75626 1.08 2.32 190 190 MS2 34/72 Linfeng_091311_rIgG_3.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 3.72 0.00 0 2 25 4 620.01038 2477.01967 -0.54 14.61 1285 1285 MS2 39/150 Linfeng_091311_rIgG_4.raw High HGAGSGQSLSHGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 267 3.69 0.00 0 14 25 3 417.53748 1250.59787 -0.52 2.63 225 225 MS2 27/48 Linfeng_091311_rIgG_6.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 46 3.59 0.00 0 38 25 3 603.58905 1808.75260 -0.94 2.11 164 164 MS2 32/72 Linfeng_091311_rIgG_5.raw High SEQHGSSSGLSSSYGQHGSGSHQSSGHGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 40 3.43 0.00 0 13 25 6 479.04327 2869.22326 0.11 13.61 1181 1181 MS2 56/280 Linfeng_091311_rIgG_6.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 55 3.41 0.00 0 15 25 3 603.59003 1808.75553 0.68 2.28 189 189 MS2 35/72 Linfeng_091311_rIgG_4.raw High QSLGHGQHGSGSGQSPSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 149 3.36 0.00 0 4 25 3 649.97076 1947.89774 -2.01 13.07 1107 1107 MS2 25/76 Linfeng_091311_rIgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 3.22 0.00 0 5 25 4 620.01062 2477.02065 -0.14 14.90 1298 1298 MS2 39/150 Linfeng_091311_rIgG_5.raw Medium SEQHGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 2.85 0.00 0 31 25 4 538.97705 2152.88637 -0.53 3.37 322 322 MS2 29/126 Linfeng_091311_rIgG_2.raw Medium SEQHGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 2.83 0.00 0 22 25 4 538.97778 2152.88930 0.83 3.77 339 339 MS2 31/126 Linfeng_091311_rIgG_6.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 148 2.79 0.00 0 29 25 3 528.90894 1584.71225 -1.74 15.49 1399 1399 MS2 17/60 Linfeng_091311_rIgG_7.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 113 2.76 0.00 0 6 25 2 698.31519 1395.62309 -1.22 13.96 1230 1230 MS2 19/26 Linfeng_091311_rIgG_6.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 111 2.71 0.00 0 29 25 2 698.31543 1395.62358 -0.87 13.70 1196 1196 MS2 18/26 Linfeng_091311_rIgG_2.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 153 2.69 0.00 0 19 25 3 528.90942 1584.71372 -0.82 15.11 1367 1367 MS2 24/60 Linfeng_091311_rIgG_3.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 130 2.69 0.00 0 25 25 2 698.31628 1395.62529 0.36 13.01 1077 1077 MS2 18/26 Linfeng_091311_rIgG_4.raw High QSLGHGQHGSGSGQSPSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 151 2.64 0.00 0 26 25 3 649.97119 1947.89902 -1.36 0.96 99 99 MS2 26/76 Linfeng_091311_rIgG_1.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 122 2.57 0.00 0 12 25 2 570.25732 1139.50737 -0.23 14.89 1351 1351 MS2 17/22 Linfeng_091311_rIgG_6.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 9 25 2 698.31531 1395.62334 -1.04 13.38 1167 1167 MS2 16/26 Linfeng_091311_rIgG_8.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 115 2.46 0.00 0 18 25 2 570.25726 1139.50725 -0.33 14.28 1239 1239 MS2 16/22 Linfeng_091311_rIgG_4.raw Medium QSLGHGQHGSGSGQSPSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 150 2.32 0.00 0 37 25 3 649.97083 1947.89792 -1.92 12.85 1076 1076 MS2 22/76 Linfeng_091311_rIgG_2.raw Medium GPYESGSGHSSGLGHR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 161 2.30 0.00 0 28 25 3 528.90961 1584.71427 -0.47 15.60 1392 1392 MS2 21/60 Linfeng_091311_rIgG_9.raw High GSGSSQSSGYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 31 25 2 565.24689 1129.48650 -0.35 11.68 948 948 MS2 12/22 Linfeng_091311_rIgG_6.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 103 2.03 0.00 0 8 25 2 570.25763 1139.50798 0.31 14.79 1281 1281 MS2 13/22 Linfeng_091311_rIgG_9.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 116 2.02 0.00 0 23 25 2 570.25732 1139.50737 -0.23 14.11 1225 1225 MS2 13/22 Linfeng_091311_rIgG_3.raw IPI00400922.5 Protein RRP5 homolog 16.84 1 27 27 40 39.52 7.16 11 17 53.72 11.70 17 19 10.45 2.62 4 4 1871 208.6 8.87 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SIKDYGVFIQFPSGLSGLAPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 268 4.27 0.00 1 5 25 3 742.07434 2224.20847 3.21 42.93 4445 4445 MS2 33/80 Linfeng_122411_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 229 4.23 0.00 0 36 25 3 608.67731 1824.01737 3.27 42.29 4365 4365 MS2 40/72 Linfeng_122411_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 248 3.59 0.00 0 17 25 3 608.67401 1824.00748 -2.16 43.29 5203 5203 MS2 34/72 Linfeng_091311_rIgG_2.raw High TKDGLEVAVLPHNIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 246 3.52 0.00 1 14 25 4 416.23981 1661.93740 2.40 27.46 2464 2464 MS2 38/84 Linfeng_122411_rIgG_2.raw High IIDYSQMDELALLSLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 387 3.37 0.00 0 23 25 3 627.33447 1879.98886 2.87 46.44 4894 4894 MS2 22/60 Linfeng_122411_rIgG_2.raw High TKDGLEVAVLPHNIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 245 3.17 0.00 1 37 25 3 554.65057 1661.93717 2.26 27.50 2470 2470 MS2 30/56 Linfeng_122411_rIgG_2.raw High DSETVDEDEEVDPALTVGTIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 189 3.13 0.00 0 0 100 2 1131.53625 2262.06523 6.36 39.87 5475 5475 MS2 25/40 Linfeng_20120125_PCAF_1.raw High VGQYLNcIVEK Unambiguous 1 1 IPI00400922.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 381 2.90 0.00 0 8 25 2 661.84302 1322.67876 1.07 28.92 2659 2659 MS2 16/20 Linfeng_122411_rIgG_2.raw High AIFENTLSTYPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 335 2.89 0.00 0 9 25 2 692.36194 1383.71660 0.79 31.72 3027 3027 MS2 17/22 Linfeng_122411_rIgG_2.raw High DSETVDEDEEVDPALTVGTIKK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 283 2.87 0.00 1 12 25 3 797.38928 2390.15329 3.13 30.86 2915 2915 MS2 27/84 Linfeng_122411_rIgG_2.raw High HELSTEYIPDPER Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 195 2.83 0.00 0 17 100 2 793.38123 1585.75517 3.68 31.22 3393 3393 MS2 18/24 Linfeng_20120125_PCAF_1.raw High TSIIEAQYLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 293 2.80 0.00 0 12 25 2 597.33112 1193.65495 2.06 30.81 2908 2908 MS2 17/18 Linfeng_122411_rIgG_2.raw High AINIGQLVDVK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 232 2.78 0.00 0 9 25 2 585.34912 1169.69097 1.76 36.31 3608 3608 MS2 17/20 Linfeng_122411_rIgG_2.raw High FVTSTSDHFVEGQTVAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 293 2.60 0.00 0 0 25 3 641.98151 1923.92997 -7.69 26.49 2993 2993 MS2 24/68 Linfeng_091311_rIgG_2.raw High FVTSTSDHFVEGQTVAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 303 2.58 0.00 0 17 25 3 641.98193 1923.93125 -7.02 26.64 2704 2704 MS2 27/68 Linfeng_091311_rIgG_1.raw High AGQEVESGQK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 253 2.54 0.00 0 11 25 2 516.75122 1032.49516 -0.50 2.87 257 257 MS2 16/18 Linfeng_091311_rIgG_2.raw High KPALVSTVEGGQDPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 384 2.52 0.00 0 41 25 3 509.27679 1525.81583 -4.13 22.25 2108 2108 MS2 22/56 Linfeng_091311_rIgG_1.raw High GRIPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 37 2.52 0.00 1 22 25 3 482.30237 1444.89255 2.68 40.38 4122 4122 MS2 24/48 Linfeng_122411_rIgG_2.raw High LGPSVVGLAR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 95 2.46 0.00 0 37 25 2 484.79868 968.59007 1.31 27.97 2533 2533 MS2 17/18 Linfeng_122411_rIgG_2.raw High WLEVEIAPDIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 269 2.42 0.00 0 11 25 2 670.86591 1340.72453 2.67 38.91 3937 3937 MS2 17/20 Linfeng_122411_rIgG_2.raw Medium VTPNEGLTVSFPFGK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 436 2.37 0.00 0 7 25 3 531.61676 1592.83573 2.36 38.42 3876 3876 MS2 24/56 Linfeng_122411_rIgG_2.raw Medium SKVEDPEINSIQDIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 432 2.35 0.00 1 25 100 3 572.30353 1714.89603 5.94 31.67 3499 3499 MS2 23/56 Linfeng_20120125_PCAF_1.raw High FYNNVQGLVPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 373 2.34 0.00 0 15 25 2 639.84662 1278.68596 1.42 31.11 2947 2947 MS2 15/20 Linfeng_122411_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 40 2.32 0.00 0 6 25 2 616.38861 1231.76995 3.13 44.06 4590 4590 MS2 18/20 Linfeng_122411_rIgG_2.raw Medium SKVEDPEINSIQDIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 414 2.29 0.00 1 34 25 3 572.30194 1714.89127 3.16 23.21 1915 1915 MS2 18/56 Linfeng_122411_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 60 2.26 0.00 0 10 25 2 616.38489 1231.76250 -2.92 45.15 5192 5192 MS2 18/20 Linfeng_091311_rIgG_1.raw High LGPSVVGLAR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 143 2.22 0.00 0 25 25 2 484.79666 968.58605 -2.84 30.13 3490 3490 MS2 15/18 Linfeng_091311_rIgG_2.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 173 2.21 0.00 0 15 25 2 613.79004 1226.57280 -5.93 25.87 2908 2908 MS2 15/18 Linfeng_091311_rIgG_2.raw High ATVVGPDSSK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 509 2.20 0.00 0 30 25 2 480.75220 960.49712 -2.69 16.15 1515 1515 MS2 10/18 Linfeng_091311_rIgG_3.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 170 2.20 0.00 0 23 25 2 613.79004 1226.57280 -5.93 25.85 2595 2595 MS2 15/18 Linfeng_091311_rIgG_1.raw High YGAFLLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 299 2.18 0.00 0 15 25 2 420.24313 839.47899 1.86 32.23 3093 3093 MS2 11/12 Linfeng_122411_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 67 2.17 0.00 0 15 25 2 616.38513 1231.76299 -2.52 45.31 5459 5459 MS2 17/20 Linfeng_091311_rIgG_2.raw High VVILNVDLLK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 34 2.16 0.00 0 15 25 2 563.36462 1125.72197 -2.01 40.74 4880 4880 MS2 15/18 Linfeng_091311_rIgG_2.raw High VEDPEINSIQDIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 370 2.14 0.00 0 15 100 2 750.38672 1499.76616 4.87 33.73 4002 4002 MS2 18/24 Linfeng_20120125_PCAF_1.raw High VGQYLNcIVEK Unambiguous 1 1 IPI00400922.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.11 0.00 0 56 25 2 661.83997 1322.67266 -3.55 30.59 3239 3239 MS2 14/20 Linfeng_091311_rIgG_1.raw High ATVVGPDSSK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 531 2.04 0.00 0 49 25 2 480.75223 960.49718 -2.63 16.40 1577 1577 MS2 12/18 Linfeng_091311_rIgG_2.raw High VVVLNcEPSK Unambiguous 1 1 IPI00400922.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 417 2.04 0.00 0 52 25 2 572.80328 1144.59929 -3.35 23.69 2603 2603 MS2 13/18 Linfeng_091311_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 64 2.03 0.00 0 19 25 2 616.38556 1231.76384 -1.83 45.27 5385 5385 MS2 16/20 Linfeng_091311_rIgG_3.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 166 2.03 0.00 0 34 25 2 613.79102 1226.57475 -4.33 25.79 2860 2860 MS2 15/18 Linfeng_091311_rIgG_3.raw High VTPNEGLTVSFPFGK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 16 25 2 796.92126 1592.83525 2.07 38.26 3856 3856 MS2 20/28 Linfeng_122411_rIgG_2.raw IPI00402182.2 Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q 32.14 3 1 17 52 60.77 21.09 12 23 39.46 17.18 8 14 42.98 15.14 7 15 588 65.6 8.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SENQEFYQDTFGQQWK Unambiguous 2 1 IPI00402182.2 CID 1.0000 0.0000 1 1 85 4.43 0.00 0 9 100 2 1017.95319 2034.89910 7.97 42.72 5518 5518 MS2 21/30 Linfeng_20120125_PCAF_4.raw High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 313 3.78 0.00 1 4 100 3 898.79236 2694.36252 7.96 40.54 5009 5009 MS2 32/100 Linfeng_20120125_PCAF_4.raw High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 316 3.76 0.00 1 12 100 3 898.79279 2694.36380 8.43 40.63 5030 5030 MS2 30/100 Linfeng_20120125_PCAF_4.raw High AIEALKEFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 310 3.67 0.00 1 46 25 3 778.74902 2334.23252 -0.68 45.70 5437 5437 MS2 30/80 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 420 3.56 0.00 0 4 25 3 570.28815 1708.84989 -2.50 44.87 5332 5332 MS2 30/56 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 422 3.54 0.00 0 22 25 2 797.40808 1593.80889 2.59 49.31 5380 5380 MS2 19/24 Linfeng_122411_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 482 3.38 0.00 0 8 25 3 491.93295 1473.78431 3.21 38.52 4002 4002 MS2 29/48 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 412 3.34 0.00 0 33 25 2 797.40826 1593.80925 2.82 48.97 5312 5312 MS2 20/24 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 311 3.29 0.00 1 13 100 3 898.79242 2694.36271 8.03 40.44 4987 4987 MS2 26/100 Linfeng_20120125_PCAF_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 425 3.27 0.00 0 34 25 2 797.40637 1593.80547 0.45 50.39 5987 5987 MS2 19/24 Linfeng_091311_rIgG_6.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 423 3.24 0.00 0 100 3 648.33490 1942.99015 7.42 43.09 5606 5606 MS2 23/64 Linfeng_20120125_PCAF_4.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 438 3.21 0.00 0 25 25 2 737.39575 1473.78423 3.15 38.48 3997 3997 MS2 20/24 Linfeng_122411_rIgG_4.raw High AIEALKEFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 316 3.14 0.00 1 26 25 3 778.75140 2334.23966 2.38 44.73 4785 4785 MS2 20/80 Linfeng_122411_rIgG_4.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 413 3.10 0.00 0 10 100 2 971.99945 1942.99162 8.19 43.05 5599 5599 MS2 19/32 Linfeng_20120125_PCAF_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 387 3.08 0.00 0 30 25 2 797.40601 1593.80474 -0.01 50.48 5985 5985 MS2 18/24 Linfeng_091311_rIgG_7.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 3.01 0.00 0 10 19 3 648.32837 1942.97055 -2.66 34.79 4054 4054 MS2 29/64 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 445 2.84 0.00 0 21 25 3 570.28784 1708.84897 -3.04 44.99 5320 5320 MS2 27/56 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 398 2.81 0.00 0 34 25 2 797.40771 1593.80815 2.13 49.09 5228 5228 MS2 14/24 Linfeng_122411_rIgG_3.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 2.80 0.00 0 26 25 2 797.40582 1593.80437 -0.24 50.29 6017 6017 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 368 2.80 0.00 0 46 25 2 797.40741 1593.80754 1.75 49.30 4839 4839 MS2 14/24 Linfeng_122411_rIgG_7.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 436 2.79 0.00 0 10 25 3 531.94037 1593.80655 1.13 49.19 5615 5615 MS2 21/48 Linfeng_122411_rIgG_5.raw High YGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 303 2.78 0.00 0 31 100 3 856.09271 2566.26358 6.81 42.70 5514 5514 MS2 28/96 Linfeng_20120125_PCAF_4.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 415 2.77 0.00 0 7 83 3 648.33368 1942.98648 5.54 43.35 5670 5670 MS2 23/64 Linfeng_20120125_PCAF_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 415 2.76 0.00 0 43 25 2 854.92822 1708.84917 -2.92 45.01 5323 5323 MS2 18/28 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 220 2.60 0.00 1 32 25 3 408.19482 1222.56992 0.01 11.94 976 976 MS2 19/40 Linfeng_091311_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 478 2.59 0.00 0 30 25 2 737.39215 1473.77703 -1.73 39.54 4661 4661 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 380 2.57 0.00 0 53 25 2 797.40594 1593.80461 -0.09 50.29 6015 6015 MS2 16/24 Linfeng_091311_rIgG_3.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 403 2.53 0.00 1 23 25 3 451.24243 1351.71274 1.71 27.86 2632 2632 MS2 22/40 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 305 2.50 0.00 0 16 100 3 856.09283 2566.26395 6.95 42.73 5521 5521 MS2 28/96 Linfeng_20120125_PCAF_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw Medium TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 2.44 0.00 1 49 25 3 451.24039 1351.70661 -2.83 29.38 3344 3344 MS2 20/40 Linfeng_091311_rIgG_4.raw High GFcFLEYEDHK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.39 0.00 0 30 100 2 722.81793 1444.62859 5.79 44.07 5848 5848 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium HIGVcISVANNR Unambiguous 13 4 IPI00402182.2;IPI00402184.4;IPI00012074.3;IPI00644055.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 2.38 0.00 0 30 9 3 447.23425 1339.68821 -1.33 4.18 475 475 MS2 23/44 Linfeng_122411_rIgG_4.raw High ADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 68 2.38 0.00 0 16 25 2 547.74078 1094.47429 -0.59 13.98 1197 1197 MS2 14/18 Linfeng_091311_rIgG_4.raw Medium VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 394 2.37 0.00 0 5 100 3 648.33228 1942.98227 3.37 43.55 5718 5718 MS2 23/64 Linfeng_20120125_PCAF_4.raw High DSDLSHVQNK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 189 2.29 0.00 0 19 25 2 571.77490 1142.54253 -1.01 15.76 1448 1448 MS2 13/18 Linfeng_091311_rIgG_4.raw Medium KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 228 2.29 0.00 1 14 25 3 408.19653 1222.57505 4.21 3.06 298 298 MS2 17/40 Linfeng_122411_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw Medium DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 446 2.28 0.00 0 34 25 3 531.94153 1593.81003 3.31 49.04 5320 5320 MS2 20/48 Linfeng_122411_rIgG_4.raw Medium VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 427 2.26 0.00 0 18 100 3 648.33496 1942.99033 7.52 42.91 5564 5564 MS2 20/64 Linfeng_20120125_PCAF_4.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 354 2.21 0.00 1 30 100 2 676.36237 1351.71745 5.20 36.38 4056 4056 MS2 15/20 Linfeng_20120125_PCAF_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 390 2.13 0.00 0 60 25 2 797.40472 1593.80217 -1.62 50.38 5990 5990 MS2 15/24 Linfeng_091311_rIgG_5.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.09 0.00 1 15 25 2 611.78748 1222.56767 -1.82 2.85 262 262 MS2 15/20 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 251 2.04 0.00 0 26 100 2 464.25940 927.51152 7.32 43.12 5615 5615 MS2 12/14 Linfeng_20120125_PCAF_4.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 340 2.04 0.00 1 28 100 2 676.36310 1351.71892 6.28 36.22 4019 4019 MS2 16/20 Linfeng_20120125_PCAF_4.raw High DSDLSHVQNK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 184 2.03 0.00 0 43 25 2 571.77435 1142.54143 -1.97 16.03 1476 1476 MS2 13/18 Linfeng_091311_rIgG_7.raw High LFVGSIPK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00402184.4 Isoform 4 of Heterogeneous nuclear ribonucleoprotein Q 32.64 5 1 15 48 53.69 21.44 10 20 39.86 18.98 8 14 38.56 13.85 6 14 527 58.7 7.56 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 313 3.78 0.00 1 4 100 3 898.79236 2694.36252 7.96 40.54 5009 5009 MS2 32/100 Linfeng_20120125_PCAF_4.raw High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 316 3.76 0.00 1 12 100 3 898.79279 2694.36380 8.43 40.63 5030 5030 MS2 30/100 Linfeng_20120125_PCAF_4.raw High AIEALKEFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 310 3.67 0.00 1 46 25 3 778.74902 2334.23252 -0.68 45.70 5437 5437 MS2 30/80 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 420 3.56 0.00 0 4 25 3 570.28815 1708.84989 -2.50 44.87 5332 5332 MS2 30/56 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 422 3.54 0.00 0 22 25 2 797.40808 1593.80889 2.59 49.31 5380 5380 MS2 19/24 Linfeng_122411_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 482 3.38 0.00 0 8 25 3 491.93295 1473.78431 3.21 38.52 4002 4002 MS2 29/48 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 412 3.34 0.00 0 33 25 2 797.40826 1593.80925 2.82 48.97 5312 5312 MS2 20/24 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 311 3.29 0.00 1 13 100 3 898.79242 2694.36271 8.03 40.44 4987 4987 MS2 26/100 Linfeng_20120125_PCAF_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 425 3.27 0.00 0 34 25 2 797.40637 1593.80547 0.45 50.39 5987 5987 MS2 19/24 Linfeng_091311_rIgG_6.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 423 3.24 0.00 0 100 3 648.33490 1942.99015 7.42 43.09 5606 5606 MS2 23/64 Linfeng_20120125_PCAF_4.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 438 3.21 0.00 0 25 25 2 737.39575 1473.78423 3.15 38.48 3997 3997 MS2 20/24 Linfeng_122411_rIgG_4.raw High AIEALKEFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 316 3.14 0.00 1 26 25 3 778.75140 2334.23966 2.38 44.73 4785 4785 MS2 20/80 Linfeng_122411_rIgG_4.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 413 3.10 0.00 0 10 100 2 971.99945 1942.99162 8.19 43.05 5599 5599 MS2 19/32 Linfeng_20120125_PCAF_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 387 3.08 0.00 0 30 25 2 797.40601 1593.80474 -0.01 50.48 5985 5985 MS2 18/24 Linfeng_091311_rIgG_7.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 3.01 0.00 0 10 19 3 648.32837 1942.97055 -2.66 34.79 4054 4054 MS2 29/64 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 445 2.84 0.00 0 21 25 3 570.28784 1708.84897 -3.04 44.99 5320 5320 MS2 27/56 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 398 2.81 0.00 0 34 25 2 797.40771 1593.80815 2.13 49.09 5228 5228 MS2 14/24 Linfeng_122411_rIgG_3.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 2.80 0.00 0 26 25 2 797.40582 1593.80437 -0.24 50.29 6017 6017 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 368 2.80 0.00 0 46 25 2 797.40741 1593.80754 1.75 49.30 4839 4839 MS2 14/24 Linfeng_122411_rIgG_7.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 436 2.79 0.00 0 10 25 3 531.94037 1593.80655 1.13 49.19 5615 5615 MS2 21/48 Linfeng_122411_rIgG_5.raw High YGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 303 2.78 0.00 0 31 100 3 856.09271 2566.26358 6.81 42.70 5514 5514 MS2 28/96 Linfeng_20120125_PCAF_4.raw High VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 415 2.77 0.00 0 7 83 3 648.33368 1942.98648 5.54 43.35 5670 5670 MS2 23/64 Linfeng_20120125_PCAF_4.raw High EFNEDGALAVLQQFK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 415 2.76 0.00 0 43 25 2 854.92822 1708.84917 -2.92 45.01 5323 5323 MS2 18/28 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High GVEAGPDLLQ Unambiguous 4 1 IPI00402184.4 CID 1.0000 0.0000 1 1 276 2.68 0.00 0 12 25 2 499.76202 998.51677 1.41 32.27 3212 3212 MS2 14/18 Linfeng_122411_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 478 2.59 0.00 0 30 25 2 737.39215 1473.77703 -1.73 39.54 4661 4661 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 380 2.57 0.00 0 53 25 2 797.40594 1593.80461 -0.09 50.29 6015 6015 MS2 16/24 Linfeng_091311_rIgG_3.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 403 2.53 0.00 1 23 25 3 451.24243 1351.71274 1.71 27.86 2632 2632 MS2 22/40 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGQQPSVGTEIFVGK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 305 2.50 0.00 0 16 100 3 856.09283 2566.26395 6.95 42.73 5521 5521 MS2 28/96 Linfeng_20120125_PCAF_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw Medium TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 363 2.44 0.00 1 49 25 3 451.24039 1351.70661 -2.83 29.38 3344 3344 MS2 20/40 Linfeng_091311_rIgG_4.raw High GFcFLEYEDHK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.39 0.00 0 30 100 2 722.81793 1444.62859 5.79 44.07 5848 5848 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium HIGVcISVANNR Unambiguous 13 4 IPI00402182.2;IPI00402184.4;IPI00012074.3;IPI00644055.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 2.38 0.00 0 30 9 3 447.23425 1339.68821 -1.33 4.18 475 475 MS2 23/44 Linfeng_122411_rIgG_4.raw Medium VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 394 2.37 0.00 0 5 100 3 648.33228 1942.98227 3.37 43.55 5718 5718 MS2 23/64 Linfeng_20120125_PCAF_4.raw High DSDLSHVQNK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 189 2.29 0.00 0 19 25 2 571.77490 1142.54253 -1.01 15.76 1448 1448 MS2 13/18 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw Medium DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 446 2.28 0.00 0 34 25 3 531.94153 1593.81003 3.31 49.04 5320 5320 MS2 20/48 Linfeng_122411_rIgG_4.raw Medium VTEGLTDVILYHQPDDK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 427 2.26 0.00 0 18 100 3 648.33496 1942.99033 7.52 42.91 5564 5564 MS2 20/64 Linfeng_20120125_PCAF_4.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 354 2.21 0.00 1 30 100 2 676.36237 1351.71745 5.20 36.38 4056 4056 MS2 15/20 Linfeng_20120125_PCAF_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 390 2.13 0.00 0 60 25 2 797.40472 1593.80217 -1.62 50.38 5990 5990 MS2 15/24 Linfeng_091311_rIgG_5.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 251 2.04 0.00 0 26 100 2 464.25940 927.51152 7.32 43.12 5615 5615 MS2 12/14 Linfeng_20120125_PCAF_4.raw High TKEQILEEFSK Unambiguous 7 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 340 2.04 0.00 1 28 100 2 676.36310 1351.71892 6.28 36.22 4019 4019 MS2 16/20 Linfeng_20120125_PCAF_4.raw High DSDLSHVQNK Unambiguous 6 2 IPI00402182.2;IPI00402184.4 CID 1.0000 0.0000 1 1 184 2.03 0.00 0 43 25 2 571.77435 1142.54143 -1.97 16.03 1476 1476 MS2 13/18 Linfeng_091311_rIgG_7.raw High LFVGSIPK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00411886.4 Nucleolar complex protein 2 homolog 4.01 1 3 3 3 7.50 4.01 3 3 749 84.9 5.62 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VQENSAYIcSR Unambiguous 1 1 IPI00411886.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 2.69 0.00 0 25 25 2 663.80823 1326.60918 -1.16 21.58 2275 2275 MS2 16/20 Linfeng_091311_rIgG_3.raw High VLAFLVLSR Unambiguous 1 1 IPI00411886.4 CID 1.0000 0.0000 1 1 37 2.51 0.00 0 20 25 2 509.32553 1017.64379 -1.76 41.86 4958 4958 MS2 15/16 Linfeng_091311_rIgG_3.raw Medium LFHEVVQAFR Unambiguous 1 1 IPI00411886.4 CID 1.0000 0.0000 1 1 599 2.29 0.00 0 2 25 3 415.89514 1245.67087 -2.45 31.65 3654 3654 MS2 21/36 Linfeng_091311_rIgG_3.raw IPI00411937.4 Nucleolar protein 56 45.12 6 19 19 46 56.46 33.50 15 20 26.51 19.70 9 10 44.88 13.64 5 16 594 66.0 9.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LVAFcPFASSQVALENANAVSEGVVHEDLR Unambiguous 4 1 IPI00411937.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 210 4.44 0.00 0 24 25 4 808.15271 3229.58901 -1.79 45.19 5372 5372 MS2 48/174 Linfeng_091311_rIgG_4.raw High LAALALASSENSSSTPEEcEEMSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.35 0.00 0 17 100 3 965.78796 2895.34934 8.90 34.99 3732 3732 MS2 30/104 Linfeng_20120125_PCAF_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 210 4.19 0.00 0 18 25 2 1177.12683 2353.24639 -1.46 46.43 5528 5528 MS2 20/40 Linfeng_091311_rIgG_4.raw High IGAAIQEELGYNcQTGGVIAEILR Unambiguous 4 1 IPI00411937.4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 330 3.98 0.00 0 31 25 3 859.11078 2575.31778 -0.31 46.23 5503 5503 MS2 34/92 Linfeng_091311_rIgG_4.raw High LAALALASSENSSSTPEEcEEMSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 3.86 0.00 0 81 100 3 965.78760 2895.34824 8.53 35.18 3776 3776 MS2 32/104 Linfeng_20120125_PCAF_4.raw High LVAFcPFASSQVALENANAVSEGVVHEDLR Unambiguous 4 1 IPI00411937.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.64 0.00 0 5 25 3 1077.20264 3229.59336 -0.45 45.18 5371 5371 MS2 34/116 Linfeng_091311_rIgG_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 272 3.57 0.00 0 6 25 3 785.09106 2353.25864 3.75 45.22 4846 4846 MS2 28/80 Linfeng_122411_rIgG_4.raw High LAALALASSENSSSTPEEcEEMSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 183 3.39 0.00 0 48 100 3 965.78802 2895.34952 8.97 34.96 4303 4303 MS2 25/104 Linfeng_20120125_PCAF_1.raw High LAALALASSENSSSTPEEcEEMSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 3.37 0.00 0 11 100 3 965.78729 2895.34732 8.21 34.90 4289 4289 MS2 27/104 Linfeng_20120125_PCAF_1.raw High LAALALASSENSSSTPEEcEEMSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl) CID 1.0000 0.0000 1 1 178 3.34 0.00 0 32 100 3 965.78717 2895.34696 8.08 34.88 3707 3707 MS2 21/104 Linfeng_20120125_PCAF_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 331 3.27 0.00 0 0 25 3 470.92145 1410.74979 -2.20 36.12 4226 4226 MS2 24/44 Linfeng_091311_rIgG_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 302 3.26 0.00 0 11 25 3 470.92340 1410.75565 1.96 35.34 3601 3601 MS2 26/44 Linfeng_122411_rIgG_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 327 3.08 0.00 0 0 25 3 470.92093 1410.74823 -3.30 36.39 4202 4202 MS2 25/44 Linfeng_091311_rIgG_5.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 281 3.07 0.00 0 11 25 3 785.08710 2353.24674 -1.31 46.41 5525 5525 MS2 28/80 Linfeng_091311_rIgG_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 272 3.05 0.00 0 26 25 3 785.08691 2353.24619 -1.54 46.64 5528 5528 MS2 24/80 Linfeng_091311_rIgG_6.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 422 2.99 0.00 0 4 22 2 688.87555 1376.74382 1.28 29.42 2840 2840 MS2 22/24 Linfeng_122411_rIgG_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 278 2.85 0.00 0 5 25 2 656.33411 1311.66094 2.25 32.61 3255 3255 MS2 18/20 Linfeng_122411_rIgG_4.raw High IINDNATYcR Unambiguous 4 1 IPI00411937.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 164 2.77 0.00 0 1 25 2 620.29144 1239.57561 -2.48 21.16 2209 2209 MS2 17/18 Linfeng_091311_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 382 2.75 0.00 0 6 22 2 688.87268 1376.73808 -2.89 30.89 3546 3546 MS2 22/24 Linfeng_091311_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 191 2.70 0.00 0 4 100 2 857.90869 1714.81011 6.28 45.60 6218 6218 MS2 19/28 Linfeng_20120125_PCAF_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 8 25 2 857.90521 1714.80315 2.22 37.14 3830 3830 MS2 18/28 Linfeng_122411_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.63 0.00 0 10 100 2 857.90845 1714.80962 5.99 45.59 6843 6843 MS2 16/28 Linfeng_20120125_PCAF_1.raw High MSQVAPSLSALIGEAVGAR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 355 2.59 0.00 0 31 25 3 619.66998 1856.99540 2.92 46.00 4944 4944 MS2 29/72 Linfeng_122411_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 464 2.56 0.00 0 3 100 2 688.87927 1376.75127 6.69 34.45 3612 3612 MS2 21/24 Linfeng_20120125_PCAF_4.raw High FSKEEPVSSGPEEAVGK Unambiguous 1 1 IPI00411937.4 CID 1.0000 0.0000 1 1 301 2.53 0.00 1 17 25 3 592.95850 1776.86094 -2.36 22.49 2395 2395 MS2 25/64 Linfeng_091311_rIgG_4.raw High EAMVQAEEAAAEITR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 299 2.51 0.00 0 27 100 2 809.89728 1618.78728 8.07 40.83 5076 5076 MS2 19/28 Linfeng_20120125_PCAF_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 452 2.50 0.00 0 29 100 2 688.87970 1376.75212 7.31 34.68 3415 3415 MS2 18/24 Linfeng_20120125_PCAF_3.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.40 0.00 0 9 100 2 857.90955 1714.81182 7.27 45.95 6930 6930 MS2 14/28 Linfeng_20120125_PCAF_1.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.35 0.00 0 39 25 2 857.90125 1714.79521 -2.41 38.22 4494 4494 MS2 16/28 Linfeng_091311_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 379 2.34 0.00 0 29 100 2 688.87830 1376.74932 5.27 34.21 4119 4119 MS2 15/24 Linfeng_20120125_PCAF_1.raw High EAMVQAEEAAAEITR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 303 2.34 0.00 0 46 100 2 809.89679 1618.78630 7.47 40.74 5679 5679 MS2 17/28 Linfeng_20120125_PCAF_1.raw High ELNEDKLEK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 433 2.26 0.00 1 24 25 2 559.28876 1117.57024 -3.01 18.25 1800 1800 MS2 13/16 Linfeng_091311_rIgG_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 299 2.26 0.00 0 5 100 2 656.33698 1311.66667 6.62 39.51 5394 5394 MS2 15/20 Linfeng_20120125_PCAF_1.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 293 2.24 0.00 0 33 25 2 656.33130 1311.65532 -2.04 33.79 3924 3924 MS2 18/20 Linfeng_091311_rIgG_4.raw High GLTDLSAcK Unambiguous 4 1 IPI00411937.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.23 0.00 0 11 25 2 482.74075 964.47423 -2.72 25.16 2769 2769 MS2 14/16 Linfeng_091311_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 446 2.23 0.00 0 31 100 2 688.87976 1376.75224 7.40 34.89 3460 3460 MS2 16/24 Linfeng_20120125_PCAF_3.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 460 2.23 0.00 0 38 25 2 688.87604 1376.74480 1.99 29.40 2722 2722 MS2 15/24 Linfeng_122411_rIgG_2.raw High VLLGVGDPK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 110 2.18 0.00 0 35 25 2 449.27457 897.54186 1.57 24.41 2171 2171 MS2 13/16 Linfeng_122411_rIgG_4.raw High VVSLSEYR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 198 2.18 0.00 0 5 18 2 476.75671 952.50615 -3.88 26.26 2918 2918 MS2 12/14 Linfeng_091311_rIgG_4.raw High GLTDLSAcK Unambiguous 4 1 IPI00411937.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 304 2.16 0.00 0 39 16 2 482.74054 964.47380 -3.17 4.34 501 501 MS2 11/16 Linfeng_122411_rIgG_4.raw High EEPVSSGPEEAVGK Unambiguous 1 1 IPI00411937.4 CID 1.0000 0.0000 1 1 159 2.16 0.00 0 3 25 2 707.83594 1414.66460 -3.61 21.96 2321 2321 MS2 18/26 Linfeng_091311_rIgG_4.raw High AQLGLGHSYSR Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 403 2.13 0.00 0 15 25 2 594.80829 1188.60930 -2.30 21.75 2292 2292 MS2 16/20 Linfeng_091311_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 2.09 0.00 0 6 100 2 857.90924 1714.81120 6.92 45.85 6904 6904 MS2 13/28 Linfeng_20120125_PCAF_1.raw High VLLGVGDPK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 112 2.08 0.00 0 14 25 2 449.27289 897.53850 -2.17 27.72 3119 3119 MS2 14/16 Linfeng_091311_rIgG_4.raw High IINDNATYcR Unambiguous 4 1 IPI00411937.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 153 2.07 0.00 0 29 25 2 620.29144 1239.57561 -2.48 21.46 2260 2260 MS2 15/18 Linfeng_091311_rIgG_6.raw High LAQFIGNR Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 493 2.00 0.00 0 12 25 2 459.76013 918.51299 -2.87 4.82 570 570 MS2 11/14 Linfeng_122411_rIgG_4.raw IPI00413173.3 Isoform Short of Antigen KI-67 14.12 2 27 27 39 25.22 4.90 9 10 34.04 7.94 14 14 36.82 4.66 9 15 2896 319.2 9.51 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KKPNPVEEEPSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 344 3.45 0.00 1 39 25 3 470.58331 1409.73539 -2.13 14.21 1268 1268 MS2 22/44 Linfeng_091311_rIgG_2.raw High AAVGEEKDINTFVGTPVEK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 394 3.25 0.00 1 33 25 3 668.68304 2004.03458 3.02 28.48 2602 2602 MS2 29/72 Linfeng_122411_rIgG_2.raw High EEAQALEDLTGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 315 2.92 0.00 0 23 100 2 725.86279 1450.71831 8.42 45.22 6755 6755 MS2 16/24 Linfeng_20120125_PCAF_1.raw High ELFQTPGHTEEAVAAGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 318 2.92 0.00 0 18 100 2 892.94965 1784.89202 5.92 30.99 3337 3337 MS2 21/32 Linfeng_20120125_PCAF_1.raw Medium LTQTSGQSTHTHKEPASGDEGIK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 281 2.83 0.00 1 14 25 4 603.04700 2409.16616 0.83 14.74 1315 1315 MS2 31/132 Linfeng_091311_rIgG_3.raw High VEVKEELLAVGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 266 2.76 0.00 1 15 25 3 438.59497 1313.77036 2.12 27.69 2495 2495 MS2 23/44 Linfeng_122411_rIgG_2.raw High EEAQALEDLTGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 330 2.75 0.00 0 12 100 2 725.86066 1450.71404 5.48 45.55 6835 6835 MS2 17/24 Linfeng_20120125_PCAF_1.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 437 2.70 0.00 0 9 25 2 595.81714 1190.62700 0.54 29.83 2780 2780 MS2 18/20 Linfeng_122411_rIgG_2.raw High SPQPDPVGTPTIFKPQSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 338 2.67 0.00 0 10 100 3 642.01440 1924.02866 5.78 33.82 4022 4022 MS2 22/68 Linfeng_20120125_PCAF_1.raw High KADVEEESLALR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 502 2.64 0.00 1 25 100 2 680.36194 1359.71660 3.74 23.70 1708 1708 MS2 14/22 Linfeng_20120125_PCAF_1.raw Medium LTQTSGETTHTDKEPVGEGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 252 2.62 0.00 1 9 25 4 529.50952 2115.01626 -1.83 15.84 1473 1473 MS2 30/114 Linfeng_091311_rIgG_3.raw High VLNNFISNQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 425 2.61 0.00 0 31 25 2 588.82428 1176.64128 3.48 23.64 1966 1966 MS2 15/18 Linfeng_122411_rIgG_2.raw Medium LTQTSGETTHTDKEPVGEGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 240 2.57 0.00 1 11 25 4 529.50903 2115.01430 -2.75 16.00 1520 1520 MS2 31/114 Linfeng_091311_rIgG_2.raw High SPQPDPVGTPTIFKPQSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 379 2.56 0.00 0 23 25 3 642.01196 1924.02134 1.97 27.59 2482 2482 MS2 27/68 Linfeng_122411_rIgG_2.raw High SPPPELTDTATSTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 270 2.53 0.00 0 28 25 2 722.86047 1444.71367 -2.06 23.28 2544 2544 MS2 17/26 Linfeng_091311_rIgG_2.raw High ELFQTPcTDNPTTDEK Unambiguous 2 1 IPI00413173.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 87 2.52 0.00 0 10 100 2 948.42566 1895.84404 5.92 30.74 3278 3278 MS2 17/30 Linfeng_20120125_PCAF_1.raw High KLDAEDVIGSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 507 2.52 0.00 1 28 100 2 601.82544 1202.64360 4.98 26.54 2275 2275 MS2 15/20 Linfeng_20120125_PCAF_1.raw High DIVEELSALK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 498 2.49 0.00 0 19 25 2 558.81250 1116.61772 2.67 40.81 4177 4177 MS2 15/18 Linfeng_122411_rIgG_2.raw High SSPELEDTATSSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 145 2.44 0.00 0 24 25 2 676.31317 1351.61907 -2.47 20.05 2091 2091 MS2 18/24 Linfeng_091311_rIgG_2.raw High SPQSDPADTPTNTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 127 2.41 0.00 0 30 25 2 729.83734 1458.66741 -2.29 16.30 1563 1563 MS2 18/26 Linfeng_091311_rIgG_2.raw High KADVEEEFLALR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 420 2.38 0.00 1 44 100 2 710.38275 1419.75823 7.27 46.92 7158 7158 MS2 16/22 Linfeng_20120125_PCAF_1.raw Medium KADVEEEFLALR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 421 2.37 0.00 1 19 25 3 473.92096 1419.74833 0.30 34.51 3381 3381 MS2 22/44 Linfeng_122411_rIgG_2.raw High LDLLGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 267 2.36 0.00 0 11 25 2 563.82788 1126.64849 1.57 36.23 3598 3598 MS2 17/20 Linfeng_122411_rIgG_2.raw High DINTFLGTPVQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 452 2.34 0.00 0 36 100 2 666.86597 1332.72466 6.61 40.45 5609 5609 MS2 16/22 Linfeng_20120125_PCAF_1.raw High QILDSAASLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 381 2.33 0.00 0 19 25 2 645.85059 1290.69390 2.99 28.44 2596 2596 MS2 15/24 Linfeng_122411_rIgG_2.raw Medium SPQPDPVGTPTIFKPQSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 333 2.31 0.00 0 15 100 3 642.01385 1924.02701 4.92 33.59 3967 3967 MS2 23/68 Linfeng_20120125_PCAF_1.raw High KLDAEDVIGSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 516 2.28 0.00 1 27 100 2 601.82550 1202.64372 5.08 26.33 2224 2224 MS2 16/20 Linfeng_20120125_PCAF_1.raw High ELFQTPGHTEEAVAAGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 325 2.25 0.00 0 22 100 2 892.94928 1784.89128 5.51 30.87 3308 3308 MS2 14/32 Linfeng_20120125_PCAF_1.raw High DINTFLGTPVQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 424 2.24 0.00 0 32 100 2 666.86517 1332.72307 5.42 40.53 5629 5629 MS2 17/22 Linfeng_20120125_PCAF_1.raw High SPQPDPVDTPASTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 278 2.20 0.00 0 12 25 2 720.35248 1439.69768 -2.54 20.92 2212 2212 MS2 15/26 Linfeng_091311_rIgG_2.raw High QILDPAASVTGSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 421 2.14 0.00 0 36 25 2 657.85602 1314.70476 2.65 27.72 2499 2499 MS2 16/24 Linfeng_122411_rIgG_2.raw High AQALEELTGFR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 492 2.13 0.00 0 20 25 2 617.82520 1234.64311 0.34 34.61 3393 3393 MS2 16/20 Linfeng_122411_rIgG_2.raw High LDLPGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 302 2.13 0.00 0 16 25 2 555.81201 1110.61675 1.20 30.56 2875 2875 MS2 15/20 Linfeng_122411_rIgG_2.raw High DINTFLGTPVQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 464 2.12 0.00 0 40 25 2 666.86273 1332.71819 1.75 34.82 3421 3421 MS2 15/22 Linfeng_122411_rIgG_2.raw High LDLLGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 279 2.12 0.00 0 23 25 2 563.82422 1126.64116 -4.93 37.40 4447 4447 MS2 16/20 Linfeng_091311_rIgG_2.raw High AQALEDLAGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 326 2.08 0.00 0 48 25 2 581.81000 1162.61272 2.05 33.19 3214 3214 MS2 16/20 Linfeng_122411_rIgG_2.raw High DINTFVGTPVEK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 407 2.06 0.00 0 47 100 2 660.34967 1319.69206 5.94 33.75 4006 4006 MS2 15/22 Linfeng_20120125_PCAF_1.raw High DIVEELSALK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 429 2.05 0.00 0 10 25 2 558.80969 1116.61211 -2.36 41.78 4755 4755 MS2 14/18 Linfeng_091311_rIgG_1.raw High KADVEEESLALR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 496 2.01 0.00 1 76 100 2 680.36188 1359.71648 3.65 24.54 1850 1850 MS2 11/22 Linfeng_20120125_PCAF_1.raw IPI00413611.1 DNA topoisomerase 1 18.69 1 10 10 17 38.28 15.16 8 12 14.62 6.54 4 5 0.00 765 90.7 9.31 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGNEKEEGETADTVGccSLR Unambiguous 1 1 IPI00413611.1 C16(Carbamidomethyl); C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.19 0.00 1 5 21 3 728.31250 2182.92295 -5.09 21.97 2330 2330 MS2 40/76 Linfeng_091311_rIgG_3.raw High VEHINLHPELDGQEYVVEFDFLGK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 255 4.06 0.00 0 7 25 4 707.60327 2827.39126 -0.92 42.32 5016 5016 MS2 38/138 Linfeng_091311_rIgG_3.raw High AGNEKEEGETADTVGccSLR Unambiguous 1 1 IPI00413611.1 C16(Carbamidomethyl); C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 30 4.00 0.00 1 14 25 3 728.31415 2182.92789 -2.82 21.39 1992 1992 MS2 32/76 Linfeng_091311_rIgG_1.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 396 3.54 0.00 0 3 25 2 754.40790 1507.80852 -1.99 30.48 3499 3499 MS2 18/24 Linfeng_091311_rIgG_3.raw High GPVFAPPYEPLPENVK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 333 3.51 0.00 0 18 25 2 877.45978 1753.91228 -2.14 36.42 4272 4272 MS2 21/30 Linfeng_091311_rIgG_3.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 377 3.40 0.00 0 2 25 2 754.41107 1507.81487 2.22 29.02 2643 2643 MS2 17/24 Linfeng_122411_rIgG_3.raw High KLEEEEDGKLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 472 3.18 0.00 2 40 25 3 439.90051 1317.68698 -2.07 15.33 1398 1398 MS2 24/40 Linfeng_091311_rIgG_3.raw High IANFKIEPPGLFR Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 255 3.15 0.00 1 5 25 3 501.28949 1501.85392 0.85 35.84 3523 3523 MS2 27/48 Linfeng_122411_rIgG_3.raw High FAWAIDMADEDYEF Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 21 2.96 0.00 0 34 25 2 861.85657 1722.70586 3.81 49.75 5311 5311 MS2 17/26 Linfeng_122411_rIgG_3.raw High KLEEEEDGKLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 468 2.93 0.00 2 47 25 3 439.90039 1317.68662 -2.35 16.14 1503 1503 MS2 22/40 Linfeng_091311_rIgG_4.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 395 2.89 0.00 0 48 25 3 503.27402 1507.80750 -2.67 30.38 3487 3487 MS2 24/48 Linfeng_091311_rIgG_3.raw High GPVFAPPYEPLPENVK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 331 2.73 0.00 0 17 25 2 877.45966 1753.91203 -2.28 36.56 4282 4282 MS2 20/30 Linfeng_091311_rIgG_4.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 441 2.66 0.00 0 25 25 3 503.27655 1507.81510 2.37 29.02 2642 2642 MS2 25/48 Linfeng_122411_rIgG_3.raw High AVAILcNHQR Unambiguous 1 1 IPI00413611.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.53 0.00 0 7 25 2 591.31262 1181.61797 -2.43 20.90 2183 2183 MS2 16/18 Linfeng_091311_rIgG_3.raw High AEEVATFFAK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 274 2.45 0.00 0 24 25 2 556.78479 1112.56230 -0.01 32.01 3033 3033 MS2 16/18 Linfeng_122411_rIgG_3.raw High AEEVATFFAK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 285 2.37 0.00 0 30 25 2 556.78314 1112.55901 -2.97 33.24 3862 3862 MS2 16/18 Linfeng_091311_rIgG_3.raw High LEVQATDREENK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 367 2.33 0.00 1 18 25 2 716.35657 1431.70586 -1.13 17.59 1718 1718 MS2 17/22 Linfeng_091311_rIgG_3.raw IPI00414101.4 Isoform 2 of DNA topoisomerase 2-alpha 33.59 7 37 44 137 136.43 19.85 27 45 154.07 22.61 27 46 126.60 12.72 15 46 1557 177.4 8.75 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDDANDAGGRNSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 6.52 0.00 1 0 25 3 908.42145 2723.24979 2.64 28.86 2652 2652 MS2 40/100 Linfeng_122411_rIgG_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 266 5.23 0.00 0 6 25 3 985.82629 2955.46433 -0.67 49.29 5962 5962 MS2 34/96 Linfeng_091311_rIgG_2.raw High KLLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 295 5.00 0.00 1 15 25 3 1028.52173 3083.55063 -3.45 45.05 5425 5425 MS2 30/100 Linfeng_091311_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 341 4.85 0.00 1 3 100 3 762.71344 2286.12577 7.03 31.23 2846 2846 MS2 34/80 Linfeng_20120125_PCAF_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 274 4.83 0.00 0 24 25 3 985.82709 2955.46671 0.14 49.28 5889 5889 MS2 32/96 Linfeng_091311_rIgG_3.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 310 4.61 0.00 1 3 25 3 762.70544 2286.10178 -3.46 28.07 3210 3210 MS2 41/80 Linfeng_091311_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 365 4.56 0.00 0 3 16 3 542.95526 1626.85123 1.58 36.63 3648 3648 MS2 33/56 Linfeng_122411_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 4.52 0.00 0 11 25 2 865.47235 1729.93743 3.92 53.37 5748 5748 MS2 21/30 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 4.49 0.00 0 1 25 2 869.91248 1738.81767 0.71 28.62 2620 2620 MS2 23/30 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 337 4.39 0.00 1 18 100 3 762.71313 2286.12485 6.63 30.82 3297 3297 MS2 31/80 Linfeng_20120125_PCAF_1.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 355 4.34 0.00 0 30 25 2 903.95526 1806.90325 1.33 53.51 6475 6475 MS2 24/30 Linfeng_091311_rIgG_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 199 4.23 0.00 0 0 100 2 835.90063 1670.79399 1.86 43.83 5321 5321 MS2 22/30 Linfeng_20120125_PCAF_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 360 4.21 0.00 0 23 25 2 903.95776 1806.90825 4.10 52.43 5637 5637 MS2 22/30 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 401 4.17 0.00 0 14 25 3 643.00342 1926.99570 1.89 42.06 4336 4336 MS2 29/64 Linfeng_122411_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 129 4.10 0.00 0 0 25 2 1022.97180 2044.93633 2.78 29.18 2695 2695 MS2 23/36 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 195 4.08 0.00 0 4 25 2 869.91119 1738.81511 -0.77 28.73 2604 2604 MS2 23/30 Linfeng_122411_rIgG_3.raw High MYVPALIFGQLLTSSNYDDDEK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 271 4.06 0.00 0 9 25 3 840.40826 2519.21024 3.62 51.64 5546 5546 MS2 34/84 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 334 4.03 0.00 0 7 25 2 964.00171 1926.99614 2.12 42.09 4340 4340 MS2 20/32 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 318 4.00 0.00 1 3 25 3 762.71069 2286.11753 3.43 23.62 1964 1964 MS2 38/80 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 409 3.97 0.00 0 25 25 3 642.99994 1926.98526 -3.52 42.94 5160 5160 MS2 29/64 Linfeng_091311_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 373 3.96 0.00 0 34 25 3 602.97076 1806.89774 -1.72 61.01 7165 7165 MS2 28/60 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 454 3.95 0.00 0 3 13 2 731.38464 1461.76201 2.43 36.62 3646 3646 MS2 20/24 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 3.92 0.00 0 5 25 3 542.95251 1626.84299 -3.49 37.62 4475 4475 MS2 34/56 Linfeng_091311_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 368 3.89 0.00 0 41 25 2 903.95734 1806.90740 3.62 52.31 5628 5628 MS2 17/30 Linfeng_122411_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 457 3.85 0.00 0 2 88 2 731.38818 1461.76909 7.27 45.47 6815 6815 MS2 20/24 Linfeng_20120125_PCAF_1.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 200 3.83 0.00 0 3 25 2 835.90002 1670.79277 1.13 35.80 3543 3543 MS2 22/30 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 305 3.78 0.00 0 3 22 2 813.92932 1626.85137 1.66 36.64 3649 3649 MS2 21/28 Linfeng_122411_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 3.76 0.00 0 25 25 3 577.31696 1729.93631 3.28 53.40 5751 5751 MS2 32/60 Linfeng_122411_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 149 3.73 0.00 0 12 25 3 682.31647 2044.93485 2.05 29.16 2692 2692 MS2 33/72 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 328 3.72 0.00 1 7 100 3 762.71265 2286.12339 5.99 30.98 3335 3335 MS2 36/80 Linfeng_20120125_PCAF_1.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 299 3.70 0.00 0 13 25 2 813.92926 1626.85124 1.59 36.71 3633 3633 MS2 20/28 Linfeng_122411_rIgG_3.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 392 3.68 0.00 0 30 25 3 602.97192 1806.90122 0.20 53.45 6467 6467 MS2 31/60 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 400 3.68 0.00 0 23 25 2 731.38110 1461.75493 -2.42 37.61 4474 4474 MS2 20/24 Linfeng_091311_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 3.62 0.00 0 44 25 3 602.97363 1806.90635 3.04 52.24 5620 5620 MS2 28/60 Linfeng_122411_rIgG_3.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.60 0.00 0 37 25 2 865.47186 1729.93645 3.35 54.39 6558 6558 MS2 22/30 Linfeng_091311_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 332 3.53 0.00 1 33 100 3 762.71283 2286.12394 6.23 30.91 3318 3318 MS2 38/80 Linfeng_20120125_PCAF_1.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 485 3.47 0.00 0 4 3 3 463.24533 1387.72144 -0.15 3.81 399 399 MS2 25/44 Linfeng_122411_rIgG_2.raw High MQSLDKDIVALMVR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 508 3.46 0.00 1 14 25 3 540.29431 1618.86838 1.71 40.56 4146 4146 MS2 26/52 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 207 3.41 0.00 0 28 100 2 869.91583 1738.82439 4.57 32.96 3816 3816 MS2 17/30 Linfeng_20120125_PCAF_1.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 512 3.39 0.00 0 13 25 3 463.24625 1387.72419 1.83 24.96 2130 2130 MS2 25/44 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 299 3.38 0.00 0 32 25 2 813.92493 1626.84258 -3.74 37.59 4472 4472 MS2 19/28 Linfeng_091311_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 232 3.36 0.00 0 35 100 2 869.91724 1738.82720 6.18 31.91 3557 3557 MS2 19/30 Linfeng_20120125_PCAF_1.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 323 3.34 0.00 0 30 25 2 963.99677 1926.98625 -3.01 43.03 5171 5171 MS2 20/32 Linfeng_091311_rIgG_2.raw High RDPALNSGVSQKPDPAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 379 3.31 0.00 1 25 25 3 593.98145 1779.92978 -2.86 17.79 1772 1772 MS2 31/64 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 502 3.29 0.00 0 2 9 3 487.92520 1461.76105 1.77 36.62 3647 3647 MS2 33/48 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 232 3.21 0.00 0 8 100 2 869.91858 1738.82988 7.73 32.30 3039 3039 MS2 20/30 Linfeng_20120125_PCAF_2.raw High DPALNSGVSQKPDPAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 414 3.21 0.00 0 5 24 3 541.94775 1623.82871 -3.11 20.19 2110 2110 MS2 26/60 Linfeng_091311_rIgG_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 355 3.20 0.00 0 2 25 2 765.40430 1529.80132 1.33 33.56 3261 3261 MS2 21/24 Linfeng_122411_rIgG_2.raw High SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 171 3.17 0.00 1 5 25 4 991.24561 3961.96059 1.28 36.97 3692 3692 MS2 34/222 Linfeng_122411_rIgG_2.raw High EWLLGMLGAESAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 391 3.12 0.00 0 20 25 2 702.86493 1404.72258 2.37 43.72 4544 4544 MS2 21/24 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 479 3.07 0.00 0 12 100 2 694.36890 1387.73052 6.39 25.85 2118 2118 MS2 20/22 Linfeng_20120125_PCAF_1.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 3.06 0.00 0 5 25 3 487.92535 1461.76151 2.08 36.58 3616 3616 MS2 29/48 Linfeng_122411_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 435 3.05 0.00 0 1 16 3 487.92239 1461.75263 -3.99 37.66 4481 4481 MS2 31/48 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 420 3.03 0.00 0 13 100 2 694.36938 1387.73149 7.09 25.11 1964 1964 MS2 20/22 Linfeng_20120125_PCAF_1.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 3.01 0.00 0 26 25 3 580.27722 1738.81711 0.38 28.65 2624 2624 MS2 29/60 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 393 3.00 0.00 0 8 25 2 694.36023 1387.71318 -6.10 25.85 2905 2905 MS2 20/22 Linfeng_091311_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 2.97 0.00 0 7 11 2 622.28564 1243.56401 1.32 3.17 300 300 MS2 17/20 Linfeng_122411_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 299 2.94 0.00 0 29 16 2 718.85217 1436.69707 -3.20 35.48 4198 4198 MS2 19/22 Linfeng_091311_rIgG_2.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 372 2.90 0.00 0 17 25 2 638.81793 1276.62859 1.42 30.40 2854 2854 MS2 19/22 Linfeng_122411_rIgG_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 338 2.88 0.00 0 39 25 2 614.82263 1228.63799 2.02 25.72 2230 2230 MS2 18/20 Linfeng_122411_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 108 2.88 0.00 0 10 25 2 622.28333 1243.55937 -2.41 23.10 2480 2480 MS2 15/20 Linfeng_091311_rIgG_4.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 312 2.88 0.00 1 11 25 3 762.70660 2286.10526 -1.94 28.13 3181 3181 MS2 28/80 Linfeng_091311_rIgG_3.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 428 2.87 0.00 0 15 15 3 463.24207 1387.71164 -7.21 25.91 2913 2913 MS2 23/44 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 2.85 0.00 0 34 100 2 731.38855 1461.76982 7.77 45.16 6741 6741 MS2 19/24 Linfeng_20120125_PCAF_1.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 339 2.85 0.00 0 13 10 2 564.83844 1128.66960 -3.54 32.71 3833 3833 MS2 21/22 Linfeng_091311_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 2.84 0.00 0 15 25 2 622.28229 1243.55730 -4.08 22.90 2491 2491 MS2 17/20 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 453 2.84 0.00 0 17 100 2 694.36847 1387.72966 5.77 25.49 1908 1908 MS2 19/22 Linfeng_20120125_PCAF_2.raw High KYDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 298 2.84 0.00 1 10 25 3 412.56940 1235.69364 -4.71 37.39 4446 4446 MS2 21/36 Linfeng_091311_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 2.83 0.00 0 19 25 2 865.47339 1729.93950 5.12 53.26 5739 5739 MS2 17/30 Linfeng_122411_rIgG_3.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 204 2.82 0.00 0 9 100 2 835.90173 1670.79619 3.18 43.61 5266 5266 MS2 20/30 Linfeng_20120125_PCAF_2.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 311 2.81 0.00 0 20 25 2 564.84088 1128.67449 0.78 31.20 2959 2959 MS2 21/22 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 514 2.77 0.00 0 27 100 2 694.36908 1387.73088 6.65 25.55 1919 1919 MS2 19/22 Linfeng_20120125_PCAF_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 381 2.74 0.00 0 38 25 3 602.97308 1806.90470 2.13 53.53 6356 6356 MS2 26/60 Linfeng_091311_rIgG_3.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.74 0.00 0 8 25 3 577.31726 1729.93723 3.81 54.34 6553 6553 MS2 22/60 Linfeng_091311_rIgG_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 207 2.74 0.00 0 5 100 2 835.90106 1670.79485 2.37 43.70 5288 5288 MS2 20/30 Linfeng_20120125_PCAF_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 205 2.72 0.00 0 26 100 2 835.90112 1670.79497 2.45 43.45 6324 6324 MS2 21/30 Linfeng_20120125_PCAF_1.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 2.72 0.00 0 37 25 3 580.27521 1738.81107 -3.09 30.41 3528 3528 MS2 25/60 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 510 2.68 0.00 0 38 100 2 694.36902 1387.73076 6.56 25.37 1890 1890 MS2 19/22 Linfeng_20120125_PCAF_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 505 2.67 0.00 0 19 100 2 694.36926 1387.73125 6.92 25.20 1863 1863 MS2 18/22 Linfeng_20120125_PCAF_2.raw High RAYDIAGSTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 327 2.66 0.00 1 10 25 2 541.28375 1081.56023 -3.20 18.04 1807 1807 MS2 17/18 Linfeng_091311_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 144 2.66 0.00 0 0 100 2 1022.97571 2044.94414 6.60 32.59 3724 3724 MS2 21/36 Linfeng_20120125_PCAF_1.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 37 25 2 718.85248 1436.69768 -2.77 35.58 4165 4165 MS2 16/22 Linfeng_091311_rIgG_3.raw High KEWLTNFMEDR Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 201 2.64 0.00 1 8 100 3 490.23654 1468.69507 4.13 48.35 7512 7512 MS2 20/40 Linfeng_20120125_PCAF_1.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 324 2.63 0.00 0 7 25 3 376.89645 1128.67481 1.07 31.33 2976 2976 MS2 22/44 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 492 2.63 0.00 0 20 100 2 731.38763 1461.76799 6.52 45.55 5723 5723 MS2 20/24 Linfeng_20120125_PCAF_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 310 2.62 0.00 1 12 25 3 762.71033 2286.11643 2.95 22.62 1853 1853 MS2 24/80 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 511 2.60 0.00 0 12 100 2 694.36914 1387.73100 6.74 26.12 2176 2176 MS2 20/22 Linfeng_20120125_PCAF_1.raw High YDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 345 2.59 0.00 0 5 25 2 554.30719 1107.60710 2.36 40.62 4153 4153 MS2 15/16 Linfeng_122411_rIgG_2.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 4 25 2 668.38293 1335.75859 1.99 41.95 4322 4322 MS2 16/20 Linfeng_122411_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 348 2.56 0.00 0 34 100 2 718.86035 1436.71343 8.19 42.46 5143 5143 MS2 15/22 Linfeng_20120125_PCAF_3.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 353 2.56 0.00 0 59 100 2 718.85901 1436.71074 6.32 42.91 5098 5098 MS2 15/22 Linfeng_20120125_PCAF_2.raw High YIFTMLSSLAR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 488 2.54 0.00 0 14 25 2 651.35187 1301.69646 3.22 43.29 4491 4491 MS2 18/20 Linfeng_122411_rIgG_2.raw High TPPLITDYREYHTDTTVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 394 2.54 0.00 1 7 25 3 717.36517 2150.08097 2.09 28.07 2546 2546 MS2 23/68 Linfeng_122411_rIgG_2.raw High SKGESDDFHMDFDSAVAPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 104 2.53 0.00 1 22 100 3 704.31390 2110.92716 6.44 38.46 5142 5142 MS2 27/72 Linfeng_20120125_PCAF_1.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 349 2.52 0.00 0 44 100 2 718.85956 1436.71184 7.08 41.78 5922 5922 MS2 16/22 Linfeng_20120125_PCAF_1.raw High YDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 259 2.50 0.00 0 4 25 2 554.30457 1107.60185 -2.38 41.59 4987 4987 MS2 15/16 Linfeng_091311_rIgG_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 399 2.50 0.00 0 17 100 2 614.82452 1228.64177 5.10 28.72 2794 2794 MS2 16/20 Linfeng_20120125_PCAF_1.raw High KYDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 296 2.49 0.00 1 17 25 2 618.35046 1235.69365 -4.70 37.37 4443 4443 MS2 17/18 Linfeng_091311_rIgG_2.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 325 2.49 0.00 0 30 25 2 564.84021 1128.67314 -0.41 31.34 3091 3091 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 293 2.48 0.00 0 4 14 2 668.37988 1335.75249 -2.58 43.01 5168 5168 MS2 16/20 Linfeng_091311_rIgG_2.raw Medium GSVPLSSSPPATHFPDETEITNPVPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 307 2.47 0.00 0 1 25 3 902.12347 2704.35587 3.44 32.50 3128 3128 MS2 33/100 Linfeng_122411_rIgG_2.raw High IMIMTDQDQDGSHIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 186 2.46 0.00 0 48 100 2 866.41095 1731.81462 6.06 27.43 2490 2490 MS2 14/28 Linfeng_20120125_PCAF_1.raw High IMIMTDQDQDGSHIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 208 2.45 0.00 0 43 100 2 866.41235 1731.81743 7.69 27.27 2454 2454 MS2 12/28 Linfeng_20120125_PCAF_1.raw High SIPSMVDGLKPGQR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 385 2.45 0.00 0 29 100 2 742.90271 1484.79814 6.12 35.93 4537 4537 MS2 16/26 Linfeng_20120125_PCAF_1.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 485 2.44 0.00 0 80 25 2 694.36542 1387.72356 1.37 24.93 2125 2125 MS2 16/22 Linfeng_122411_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 104 2.42 0.00 0 16 25 2 622.28308 1243.55889 -2.81 23.00 2472 2472 MS2 15/20 Linfeng_091311_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 486 2.42 0.00 0 12 100 2 731.38867 1461.77007 7.94 45.79 5953 5953 MS2 18/24 Linfeng_20120125_PCAF_3.raw High DKLDETGNSLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 400 2.41 0.00 1 55 25 2 610.31091 1219.61455 -1.62 19.60 2028 2028 MS2 17/20 Linfeng_091311_rIgG_2.raw High YIFTMLSSLAR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 466 2.40 0.00 0 43 25 2 651.34875 1301.69023 -1.57 44.18 5315 5315 MS2 17/20 Linfeng_091311_rIgG_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 257 2.40 0.00 0 45 100 2 835.90393 1670.80058 5.81 44.07 6475 6475 MS2 19/30 Linfeng_20120125_PCAF_1.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 312 2.39 0.00 0 21 100 2 564.84418 1128.68108 6.62 37.66 4953 4953 MS2 21/22 Linfeng_20120125_PCAF_1.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 502 2.39 0.00 0 26 100 2 694.36908 1387.73088 6.65 26.04 2160 2160 MS2 19/22 Linfeng_20120125_PCAF_1.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 340 2.38 0.00 0 38 25 2 813.92548 1626.84368 -3.06 37.66 4429 4429 MS2 17/28 Linfeng_091311_rIgG_3.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 336 2.37 0.00 0 14 25 2 638.81573 1276.62419 -2.02 31.54 3678 3678 MS2 19/22 Linfeng_091311_rIgG_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 437 2.33 0.00 0 11 100 2 765.40790 1529.80852 6.04 41.58 5875 5875 MS2 14/24 Linfeng_20120125_PCAF_1.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 316 2.32 0.00 0 8 25 2 491.75616 982.50505 2.43 28.42 2594 2594 MS2 13/14 Linfeng_122411_rIgG_2.raw High AQVQLNK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 346 2.32 0.00 0 17 25 2 400.73386 800.46044 -2.59 16.39 1575 1575 MS2 11/12 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 481 2.27 0.00 0 37 100 2 694.36957 1387.73186 7.36 26.48 2033 2033 MS2 19/22 Linfeng_20120125_PCAF_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 2.26 0.00 0 16 100 2 869.91821 1738.82915 7.31 33.25 3885 3885 MS2 14/30 Linfeng_20120125_PCAF_1.raw High LDDANDAGGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 51 2.23 0.00 0 45 25 2 502.22552 1003.44377 -0.22 12.80 1046 1046 MS2 14/18 Linfeng_091311_rIgG_4.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 280 2.22 0.00 0 9 25 2 668.38086 1335.75444 -1.11 43.15 5120 5120 MS2 15/20 Linfeng_091311_rIgG_3.raw High KEWLTNFMEDR Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 221 2.22 0.00 1 7 100 2 734.85181 1468.69634 4.99 48.34 7509 7509 MS2 15/20 Linfeng_20120125_PCAF_1.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 2.20 0.00 0 9 100 2 869.91760 1738.82793 6.60 33.09 3847 3847 MS2 16/30 Linfeng_20120125_PCAF_1.raw High DKYGVFPLR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 296 2.17 0.00 1 12 25 2 547.80396 1094.60063 1.17 29.96 2797 2797 MS2 15/16 Linfeng_122411_rIgG_2.raw High LDDANDAGGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 64 2.17 0.00 0 35 25 2 502.22467 1003.44206 -1.92 13.49 1165 1165 MS2 15/18 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.15 0.00 0 5 25 2 491.75320 982.49913 -3.60 30.35 3521 3521 MS2 13/14 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 502 2.13 0.00 0 44 100 2 694.36853 1387.72978 5.86 26.28 2211 2211 MS2 17/22 Linfeng_20120125_PCAF_1.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 429 2.09 0.00 0 25 100 2 614.82556 1228.64385 6.79 28.84 2445 2445 MS2 15/20 Linfeng_20120125_PCAF_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 432 2.08 0.00 0 26 100 2 614.82495 1228.64263 5.80 28.98 2466 2466 MS2 13/20 Linfeng_20120125_PCAF_2.raw High SPSDLWK Unambiguous 11 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 404 2.07 0.00 0 9 25 2 416.71194 832.41661 -4.05 28.00 3200 3200 MS2 10/12 Linfeng_091311_rIgG_2.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 277 2.07 0.00 0 11 25 2 668.38324 1335.75920 2.45 42.00 4315 4315 MS2 14/20 Linfeng_122411_rIgG_3.raw High RAYDIAGSTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 2.06 0.00 1 15 25 2 541.28381 1081.56035 -3.09 17.93 1766 1766 MS2 17/18 Linfeng_091311_rIgG_3.raw High ELILFSNSDNER Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 341 2.06 0.00 0 30 100 2 718.86047 1436.71367 8.36 42.32 5108 5108 MS2 14/22 Linfeng_20120125_PCAF_3.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 484 2.05 0.00 0 52 100 2 694.36835 1387.72942 5.60 23.94 1747 1747 MS2 16/22 Linfeng_20120125_PCAF_1.raw High EQVLEPMLNGTEK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 377 2.04 0.00 0 43 100 2 744.37817 1487.74907 5.36 34.49 4189 4189 MS2 13/24 Linfeng_20120125_PCAF_1.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 306 2.03 0.00 0 44 25 2 491.75452 982.50176 -0.92 28.48 2570 2570 MS2 13/14 Linfeng_122411_rIgG_3.raw High IIIENKPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 79 2.00 0.00 0 17 25 2 477.80130 954.59532 -3.11 17.77 1769 1769 MS2 12/14 Linfeng_091311_rIgG_2.raw IPI00414676.6 Heat shock protein HSP 90-beta 25.28 4 11 16 45 38.85 16.02 11 15 28.50 9.39 5 10 50.18 11.74 6 20 724 83.2 5.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 67 4.02 0.00 0 18 25 2 924.40485 1847.80242 2.89 32.45 3090 3090 MS2 23/28 Linfeng_122411_rIgG_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 67 3.60 0.00 0 28 25 2 924.40381 1847.80034 1.77 32.81 3336 3336 MS2 20/28 Linfeng_122411_rIgG_6.raw High YHTSQSGDEMTSLSEYVSR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 97 3.29 0.00 0 16 100 3 726.32544 2176.96177 7.60 38.51 4259 4259 MS2 28/72 Linfeng_20120125_PCAF_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 67 3.28 0.00 0 31 100 2 924.40955 1847.81182 7.98 36.60 4264 4264 MS2 20/28 Linfeng_20120125_PCAF_6.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 65 3.20 0.00 0 33 100 2 924.40936 1847.81145 7.78 36.58 4098 4098 MS2 20/28 Linfeng_20120125_PCAF_4.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 62 3.16 0.00 0 5 100 2 924.40790 1847.80852 6.20 36.46 3805 3805 MS2 22/28 Linfeng_20120125_PCAF_3.raw High KHLEINPDHPIVETLR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 262 3.10 0.00 1 13 25 4 478.51529 1911.03933 -2.84 27.04 3033 3033 MS2 33/90 Linfeng_091311_rIgG_3.raw High HSQFIGYPITLYLEK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 2 404 3.02 0.00 0 6 25 3 603.65637 1808.95456 -2.01 40.24 4754 4754 MS2 30/56 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 314 2.95 0.00 0 5 23 2 638.32349 1275.63970 -2.40 28.64 3250 3250 MS2 18/22 Linfeng_091311_rIgG_3.raw Medium VILHLKEDQTEYLEER Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 399 2.90 0.00 1 33 25 4 504.51773 2015.04909 2.29 28.49 2716 2716 MS2 28/90 Linfeng_122411_rIgG_4.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 373 2.90 0.00 0 12 21 2 621.85437 1242.70146 -3.08 34.74 4055 4055 MS2 18/22 Linfeng_091311_rIgG_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 396 2.90 0.00 0 6 25 2 621.85718 1242.70708 1.44 33.66 3031 3031 MS2 17/22 Linfeng_122411_rIgG_9.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 353 2.89 0.00 0 12 25 2 621.85760 1242.70793 2.13 33.70 3394 3394 MS2 20/22 Linfeng_122411_rIgG_4.raw High TLTLVDTGIGMTK Unambiguous 3 2 IPI00414676.6;IPI00784295.2 CID 1.0000 0.0000 1 1 344 2.81 0.00 0 18 100 2 675.37659 1349.74590 8.41 42.81 5224 5224 MS2 18/24 Linfeng_20120125_PCAF_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 400 2.80 0.00 0 10 25 2 621.85626 1242.70525 -0.04 33.69 3130 3130 MS2 18/22 Linfeng_122411_rIgG_10.raw High HSQFIGYPITLYLEK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 2 395 2.73 0.00 0 20 25 3 603.65900 1808.96244 2.35 39.63 3777 3777 MS2 22/56 Linfeng_122411_rIgG_9.raw High HLEINPDHPIVETLR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 335 2.69 0.00 0 15 25 3 594.98700 1782.94645 -1.87 30.10 3448 3448 MS2 25/56 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 68 2.68 0.00 0 8 25 2 656.28705 1311.56682 -2.40 25.33 2765 2765 MS2 14/18 Linfeng_091311_rIgG_7.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.63 0.00 0 15 100 2 621.86108 1242.71489 7.73 41.89 5536 5536 MS2 17/22 Linfeng_20120125_PCAF_10.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 67 2.62 0.00 0 9 25 2 656.28754 1311.56780 -1.65 24.93 2742 2742 MS2 16/18 Linfeng_091311_rIgG_3.raw High LGIHEDSTNR Unambiguous 2 1 IPI00414676.6 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 19 25 3 381.19052 1141.55701 -2.33 17.29 1675 1675 MS2 22/36 Linfeng_091311_rIgG_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 78 2.56 0.00 0 25 100 2 924.40955 1847.81182 7.98 36.49 4240 4240 MS2 19/28 Linfeng_20120125_PCAF_6.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 68 2.54 0.00 0 21 100 2 924.40942 1847.81157 7.85 36.45 4229 4229 MS2 17/28 Linfeng_20120125_PCAF_6.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 352 2.52 0.00 0 19 25 2 638.32306 1275.63884 -3.06 28.94 3255 3255 MS2 16/22 Linfeng_091311_rIgG_7.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 444 2.52 0.00 0 20 100 2 757.40216 1513.79704 7.47 41.13 5324 5324 MS2 18/26 Linfeng_20120125_PCAF_6.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 409 2.47 0.00 0 7 25 2 621.85620 1242.70513 -0.13 4.47 471 471 MS2 17/22 Linfeng_122411_rIgG_7.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 397 2.43 0.00 0 24 100 2 638.32983 1275.65239 7.56 28.96 2340 2340 MS2 14/22 Linfeng_20120125_PCAF_7.raw Medium LGIHEDSTNR Unambiguous 2 1 IPI00414676.6 CID 1.0000 0.0000 1 1 289 2.39 0.00 0 39 25 3 381.19058 1141.55719 -2.17 17.45 1687 1687 MS2 17/36 Linfeng_091311_rIgG_4.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 427 2.38 0.00 0 25 100 2 621.86090 1242.71453 7.43 41.83 5521 5521 MS2 17/22 Linfeng_20120125_PCAF_10.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 64 2.38 0.00 0 15 25 2 656.28754 1311.56780 -1.65 25.30 2759 2759 MS2 14/18 Linfeng_091311_rIgG_9.raw Medium RAPFDLFENKK Unambiguous 2 1 IPI00414676.6 CID 1.0000 0.0000 1 1 469 2.38 0.00 2 45 25 3 455.58148 1364.72989 -1.68 30.52 3505 3505 MS2 19/40 Linfeng_091311_rIgG_3.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 372 2.34 0.00 0 11 25 2 580.79462 1160.58196 -1.24 28.38 3214 3214 MS2 16/18 Linfeng_091311_rIgG_3.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 417 2.29 0.00 0 20 100 2 757.40228 1513.79729 7.63 41.01 4807 4807 MS2 17/26 Linfeng_20120125_PCAF_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 66 2.29 0.00 0 59 100 2 924.40918 1847.81108 7.58 36.68 4119 4119 MS2 15/28 Linfeng_20120125_PCAF_4.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 490 2.18 0.00 0 57 25 2 580.79614 1160.58501 1.38 24.77 2321 2321 MS2 14/18 Linfeng_122411_rIgG_5.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 438 2.17 0.00 0 81 100 2 757.40277 1513.79827 8.27 41.00 5294 5294 MS2 15/26 Linfeng_20120125_PCAF_6.raw High EQVANSAFVER Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 324 2.16 0.00 0 4 25 2 625.31036 1249.61345 -3.00 24.44 2673 2673 MS2 16/20 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.14 0.00 0 24 100 2 638.33014 1275.65300 8.04 29.00 2347 2347 MS2 12/22 Linfeng_20120125_PCAF_7.raw High YIDQEELNK Unambiguous 6 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 238 2.12 0.00 0 40 25 2 576.28137 1151.55547 -2.14 22.64 2421 2421 MS2 14/16 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 392 2.12 0.00 0 20 100 2 638.32947 1275.65166 6.98 28.21 2227 2227 MS2 17/22 Linfeng_20120125_PCAF_7.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 363 2.10 0.00 0 48 100 2 621.86072 1242.71416 7.14 41.62 4957 4957 MS2 16/22 Linfeng_20120125_PCAF_7.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.10 0.00 0 40 100 2 638.32941 1275.65154 6.89 28.18 2169 2169 MS2 17/22 Linfeng_20120125_PCAF_3.raw High TLTLVDTGIGMTK Unambiguous 3 2 IPI00414676.6;IPI00784295.2 CID 1.0000 0.0000 1 1 359 2.09 0.00 0 12 100 2 675.37604 1349.74480 7.59 42.76 5224 5224 MS2 16/24 Linfeng_20120125_PCAF_7.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.08 0.00 0 18 100 2 757.40271 1513.79814 8.19 41.08 5136 5136 MS2 18/26 Linfeng_20120125_PCAF_4.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 507 2.02 0.00 0 47 25 2 580.79700 1160.58672 2.86 26.08 2397 2397 MS2 14/18 Linfeng_122411_rIgG_4.raw IPI00414696.1 Isoform A2 of Heterogeneous nuclear ribonucleoproteins A2/B1 60.70 3 20 21 79 131.19 56.89 15 41 77.10 46.92 14 23 44.13 32.55 7 15 341 36.0 8.65 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 24 7.02 0.00 0 1 25 3 832.35358 2495.04618 2.61 31.86 3214 3214 MS2 42/108 Linfeng_122411_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 19 6.39 0.00 0 1 20 3 832.34918 2495.03299 -2.67 32.72 3771 3771 MS2 41/108 Linfeng_091311_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 19 5.34 0.00 0 1 25 3 832.34863 2495.03135 -3.33 32.80 3771 3771 MS2 41/108 Linfeng_091311_rIgG_7.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 380 4.70 0.00 1 4 13 3 643.00916 1927.01291 -2.23 39.10 4574 4574 MS2 32/64 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 25 4.55 0.00 0 0 100 2 1095.46155 2189.91582 4.73 26.10 2127 2127 MS2 23/48 Linfeng_20120125_PCAF_6.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 375 4.48 0.00 1 4 25 3 643.01257 1927.02317 3.09 38.25 4017 4017 MS2 33/64 Linfeng_122411_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 291 4.46 0.00 1 11 25 3 740.69446 2220.06882 -0.87 42.37 4994 4994 MS2 34/68 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 359 4.43 0.00 0 13 25 2 899.96375 1798.92021 -1.13 43.22 5101 5101 MS2 25/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 367 4.32 0.00 0 11 25 2 899.96716 1798.92705 2.67 42.09 3931 3931 MS2 26/30 Linfeng_122411_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 23 4.31 0.00 0 6 25 3 730.64197 2189.91135 2.69 25.73 2405 2405 MS2 32/96 Linfeng_122411_rIgG_6.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 386 4.29 0.00 1 6 10 3 643.00928 1927.01328 -2.04 39.06 4581 4581 MS2 32/64 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 360 4.26 0.00 0 8 25 2 899.96747 1798.92766 3.01 41.98 4482 4482 MS2 26/30 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 346 4.24 0.00 0 10 25 2 899.96283 1798.91838 -2.15 43.28 5100 5100 MS2 25/30 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 12 4.22 0.00 0 7 25 3 730.63623 2189.89414 -5.17 26.92 3001 3001 MS2 37/96 Linfeng_091311_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 291 4.14 0.00 1 19 25 3 740.69446 2220.06882 -0.87 42.32 4979 4979 MS2 32/68 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 12 4.11 0.00 0 10 25 3 730.63708 2189.89670 -4.00 27.03 2991 2991 MS2 37/96 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 30 4.01 0.00 0 0 100 3 730.64410 2189.91776 5.62 24.37 1861 1861 MS2 39/96 Linfeng_20120125_PCAF_6.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 361 3.99 0.00 1 15 25 2 964.01019 1927.01311 -2.13 39.14 4591 4591 MS2 24/32 Linfeng_091311_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 311 3.94 0.00 1 4 25 3 740.69739 2220.07761 3.09 41.49 4420 4420 MS2 30/68 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 354 3.89 0.00 0 65 25 2 899.96240 1798.91753 -2.62 43.34 5108 5108 MS2 24/30 Linfeng_091311_rIgG_9.raw High RGFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 218 3.85 0.00 1 8 25 3 617.95825 1851.86020 -3.20 33.92 3926 3926 MS2 31/60 Linfeng_091311_rIgG_6.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 27 3.85 0.00 0 3 100 2 1095.46448 2189.92168 7.41 24.26 1850 1850 MS2 22/48 Linfeng_20120125_PCAF_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 361 3.69 0.00 0 27 25 2 899.96246 1798.91765 -2.55 43.21 5253 5253 MS2 23/30 Linfeng_091311_rIgG_10.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 402 3.64 0.00 0 12 25 3 600.31384 1798.92698 2.63 42.02 4486 4486 MS2 32/60 Linfeng_122411_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 320 3.64 0.00 1 19 25 3 740.69659 2220.07523 2.02 41.48 3854 3854 MS2 26/68 Linfeng_122411_rIgG_7.raw High ALSRQEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 413 3.56 0.00 1 9 13 3 550.27417 1648.80796 0.45 3.85 402 402 MS2 27/52 Linfeng_122411_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 25 3.44 0.00 0 0 100 2 1248.03235 2495.05742 7.12 34.99 3888 3888 MS2 24/54 Linfeng_20120125_PCAF_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 347 3.40 0.00 0 0 100 2 899.96851 1798.92974 4.17 55.13 7713 7713 MS2 24/30 Linfeng_20120125_PCAF_6.raw High RGFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 218 3.27 0.00 1 22 25 3 617.95819 1851.86002 -3.30 34.03 3928 3928 MS2 30/60 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 391 3.26 0.00 0 17 25 3 600.31122 1798.91910 -1.75 43.34 5108 5108 MS2 34/60 Linfeng_091311_rIgG_7.raw High GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 402 3.20 0.00 1 4 25 3 759.72461 2277.15927 1.82 39.33 4151 4151 MS2 30/76 Linfeng_122411_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 529 3.18 0.00 0 36 25 2 594.82892 1188.65056 2.91 30.36 2460 2460 MS2 15/18 Linfeng_122411_rIgG_7.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 123 3.17 0.00 0 22 25 3 459.87949 1377.62390 -4.08 24.66 2261 2261 MS2 30/56 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 396 3.07 0.00 0 13 25 3 600.31079 1798.91782 -2.46 43.28 5108 5108 MS2 32/60 Linfeng_091311_rIgG_6.raw High GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 403 3.07 0.00 1 8 25 4 570.04565 2277.16079 2.49 39.13 4126 4126 MS2 33/114 Linfeng_122411_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 25 3.07 0.00 0 0 100 2 1248.03186 2495.05644 6.73 34.93 3874 3874 MS2 23/54 Linfeng_20120125_PCAF_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 602 3.05 0.00 0 26 24 2 594.82410 1188.64092 -5.20 35.33 4106 4106 MS2 17/18 Linfeng_091311_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 559 2.97 0.00 0 0 25 2 594.82379 1188.64031 -5.72 35.34 4097 4097 MS2 17/18 Linfeng_091311_rIgG_7.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 75 2.95 0.00 0 49 25 2 507.22598 1013.44469 1.08 25.04 2313 2313 MS2 15/18 Linfeng_122411_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 276 2.91 0.00 1 43 25 3 740.69336 2220.06552 -2.35 42.36 5144 5144 MS2 21/68 Linfeng_091311_rIgG_10.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 535 2.91 0.00 0 26 25 2 594.82501 1188.64275 -3.66 35.39 4250 4250 MS2 17/18 Linfeng_091311_rIgG_10.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 76 2.89 0.00 0 21 25 2 507.22598 1013.44469 1.08 26.09 2453 2453 MS2 15/18 Linfeng_122411_rIgG_6.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 371 2.86 0.00 1 4 25 3 627.32495 1879.96030 -3.12 25.54 2818 2818 MS2 30/60 Linfeng_091311_rIgG_6.raw High SGRGGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 147 2.81 0.00 1 36 25 3 438.53784 1313.59897 0.58 4.73 531 531 MS2 22/48 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 62 2.79 0.00 0 48 25 2 507.22263 1013.43797 -5.54 26.96 3006 3006 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 406 2.76 0.00 1 5 25 4 570.04504 2277.15835 1.42 40.35 4278 4278 MS2 30/114 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 63 2.76 0.00 0 14 13 2 507.22333 1013.43938 -4.16 27.06 2996 2996 MS2 16/18 Linfeng_091311_rIgG_7.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 403 2.74 0.00 1 17 100 3 627.33051 1879.97696 5.74 37.74 4527 4527 MS2 23/60 Linfeng_20120125_PCAF_6.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 377 2.73 0.00 1 14 100 3 627.33112 1879.97879 6.71 37.91 4566 4566 MS2 20/60 Linfeng_20120125_PCAF_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 522 2.73 0.00 0 10 17 2 594.83167 1188.65605 7.53 41.52 5419 5419 MS2 17/18 Linfeng_20120125_PCAF_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 571 2.69 0.00 0 18 22 2 594.82391 1188.64055 -5.51 35.50 4188 4188 MS2 16/18 Linfeng_091311_rIgG_8.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 373 2.69 0.00 1 2 25 3 627.32483 1879.95993 -3.32 24.91 2706 2706 MS2 27/60 Linfeng_091311_rIgG_7.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 58 2.66 0.00 0 15 25 2 507.22372 1013.44017 -3.37 27.07 3062 3062 MS2 15/18 Linfeng_091311_rIgG_8.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 571 2.62 0.00 0 2 21 2 594.82764 1188.64800 0.75 34.32 3526 3526 MS2 17/18 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 58 2.59 0.00 0 12 25 2 507.22354 1013.43981 -3.74 27.06 2998 2998 MS2 15/18 Linfeng_091311_rIgG_9.raw Medium KRGFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 305 2.58 0.00 2 21 25 4 495.74661 1979.96462 1.78 30.58 3049 3049 MS2 31/96 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 398 2.57 0.00 0 36 25 3 600.31049 1798.91690 -2.97 43.31 5104 5104 MS2 26/60 Linfeng_091311_rIgG_9.raw High QEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 148 2.53 0.00 0 13 25 2 611.27881 1221.55034 -2.08 17.21 1640 1640 MS2 17/18 Linfeng_091311_rIgG_7.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 376 2.51 0.00 1 1 17 3 643.01251 1927.02298 3.00 48.51 7128 7128 MS2 26/64 Linfeng_20120125_PCAF_6.raw High GFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 127 2.40 0.00 0 10 100 2 848.39172 1695.77617 6.58 46.85 6714 6714 MS2 23/28 Linfeng_20120125_PCAF_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 75 2.34 0.00 0 47 25 2 507.22574 1013.44420 0.60 4.89 595 595 MS2 15/18 Linfeng_122411_rIgG_5.raw Medium LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 374 2.32 0.00 1 42 100 3 627.33130 1879.97934 7.01 36.84 4320 4320 MS2 21/60 Linfeng_20120125_PCAF_6.raw Medium GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 116 2.27 0.00 0 18 25 3 459.87875 1377.62171 -5.67 26.63 2963 2963 MS2 24/56 Linfeng_091311_rIgG_6.raw High GGSDGYGSGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 37 2.27 0.00 0 55 25 2 456.69342 912.37956 -1.18 3.22 329 329 MS2 14/18 Linfeng_091311_rIgG_8.raw Medium LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 378 2.27 0.00 1 23 100 3 627.33118 1879.97898 6.81 35.62 4038 4038 MS2 22/60 Linfeng_20120125_PCAF_6.raw High GGSDGYGSGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 16 2.26 0.00 0 26 25 2 456.69299 912.37871 -2.12 2.80 266 266 MS2 13/18 Linfeng_091311_rIgG_7.raw High EESGKPGAHVTVK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 365 2.26 0.00 0 14 25 2 669.85431 1338.70134 0.05 12.02 972 972 MS2 14/24 Linfeng_091311_rIgG_7.raw High QEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 137 2.17 0.00 0 6 25 2 611.27930 1221.55132 -1.28 17.28 1683 1683 MS2 16/18 Linfeng_091311_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.17 0.00 0 48 25 2 497.24872 993.49016 4.53 22.37 1957 1957 MS2 13/14 Linfeng_122411_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 2.16 0.00 0 19 25 2 497.24542 993.48357 -2.10 25.17 2767 2767 MS2 13/14 Linfeng_091311_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 2.13 0.00 0 11 25 2 497.24512 993.48296 -2.72 25.14 2739 2739 MS2 13/14 Linfeng_091311_rIgG_7.raw High EESGKPGAHVTVK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 374 2.13 0.00 0 3 25 2 669.85425 1338.70122 -0.04 13.74 1198 1198 MS2 18/24 Linfeng_091311_rIgG_6.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 108 2.12 0.00 0 12 25 2 689.31512 1377.62297 -4.75 26.53 2989 2989 MS2 15/28 Linfeng_091311_rIgG_8.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 128 2.10 0.00 0 8 23 2 689.31696 1377.62663 -2.10 24.59 2251 2251 MS2 18/28 Linfeng_122411_rIgG_6.raw High DYFEEYGK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 47 2.10 0.00 0 25 25 2 525.72546 1050.44365 2.06 28.79 2813 2813 MS2 12/14 Linfeng_122411_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 522 2.09 0.00 0 65 100 2 594.83160 1188.65593 7.43 41.04 5302 5302 MS2 14/18 Linfeng_20120125_PCAF_6.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 112 2.06 0.00 0 11 25 2 689.31616 1377.62505 -3.25 26.42 2936 2936 MS2 16/28 Linfeng_091311_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 473 2.02 0.00 0 35 100 2 594.83087 1188.65447 6.20 41.85 5527 5527 MS2 14/18 Linfeng_20120125_PCAF_10.raw High NYYEQWGK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 60 2.02 0.00 0 7 17 2 544.24432 1087.48137 -2.74 27.76 3112 3112 MS2 12/14 Linfeng_091311_rIgG_6.raw IPI00419273.5 Isoform 1 of Cullin-4A 5.27 2 1 3 3 7.81 5.27 3 3 759 87.6 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LKHEcGAAFTSK Unambiguous 6 2 IPI00965290.1;IPI00419273.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 2.89 0.00 1 22 25 3 450.22699 1348.66642 -1.07 15.16 1374 1374 MS2 24/44 Linfeng_091311_rIgG_3.raw High YNLEELYQAVENLcSHK Unambiguous 2 1 IPI00419273.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 2.52 0.00 0 14 25 3 704.00183 2109.99094 -0.05 46.81 5579 5579 MS2 23/64 Linfeng_091311_rIgG_3.raw High TIDGILLLIER Unambiguous 6 2 IPI00965290.1;IPI00419273.5 CID 1.0000 0.0000 1 1 197 2.39 0.00 0 17 25 2 628.38464 1255.76201 -0.06 47.66 5685 5685 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00420014.2 Isoform 1 of U5 small nuclear ribonucleoprotein 200 kDa helicase 22.38 5 37 37 81 74.86 8.15 13 25 132.53 20.79 33 42 35.37 5.62 9 14 2136 244.4 6.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 5.02 0.00 0 11 25 3 648.66455 1943.97910 2.43 35.39 3492 3492 MS2 40/72 Linfeng_122411_rIgG_2.raw High GLFYFDNSFRPVPLEQTYVGITEK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 326 4.88 0.00 0 4 25 3 940.81635 2820.43448 3.57 44.05 4589 4589 MS2 35/92 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 266 4.79 0.00 0 7 25 3 698.38318 2093.13498 3.42 47.81 5068 5068 MS2 34/72 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 306 4.76 0.00 0 12 25 3 698.38013 2093.12583 -0.95 48.73 5648 5648 MS2 35/72 Linfeng_091311_rIgG_1.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 4.52 0.00 0 21 25 3 592.31897 1774.94236 3.10 44.08 4592 4592 MS2 36/60 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 193 4.35 0.00 0 3 25 2 1047.07129 2093.13530 3.57 47.79 5066 5066 MS2 20/36 Linfeng_122411_rIgG_2.raw High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 4.33 0.00 0 4 25 2 972.49377 1943.98027 3.03 35.43 3496 3496 MS2 24/36 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 289 4.32 0.00 0 34 25 3 698.37988 2093.12510 -1.30 48.98 5923 5923 MS2 32/72 Linfeng_091311_rIgG_2.raw High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 349 4.18 0.00 0 10 100 2 972.49750 1943.98772 6.86 42.95 6203 6203 MS2 24/36 Linfeng_20120125_PCAF_1.raw High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 338 4.17 0.00 0 0 100 2 972.49219 1943.97710 1.40 43.18 6257 6257 MS2 26/36 Linfeng_20120125_PCAF_1.raw High ETYEVLLSFIQAALGDQPR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 367 4.10 0.00 0 6 25 3 717.37854 2150.12107 3.80 55.62 5991 5991 MS2 30/72 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 90 4.04 0.00 0 61 25 2 743.95325 1486.89922 -0.02 50.38 5861 5861 MS2 21/24 Linfeng_091311_rIgG_1.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 3.98 0.00 0 7 25 2 887.97498 1774.94267 3.28 44.14 4600 4600 MS2 24/30 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 513 3.92 0.00 0 29 25 3 529.62207 1586.85166 3.62 50.87 5451 5451 MS2 31/56 Linfeng_122411_rIgG_2.raw High WTELGALDILQMLGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 384 3.73 0.00 0 10 25 2 858.46411 1715.92095 3.46 52.34 5626 5626 MS2 22/28 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 72 3.71 0.00 0 48 25 2 743.95526 1486.90325 2.69 49.46 5276 5276 MS2 20/24 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 89 3.61 0.00 0 44 25 2 743.95313 1486.89897 -0.18 50.69 6139 6139 MS2 20/24 Linfeng_091311_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 308 3.53 0.00 0 28 25 3 672.36780 2015.08884 3.95 47.53 5032 5032 MS2 33/68 Linfeng_122411_rIgG_2.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 421 3.53 0.00 0 14 25 3 592.31567 1774.93247 -2.47 44.82 5150 5150 MS2 32/60 Linfeng_091311_rIgG_1.raw High GLFYFDNSFRPVPLEQTYVGITEK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 325 3.52 0.00 0 16 25 4 705.86475 2820.43715 4.52 44.11 4596 4596 MS2 37/138 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 465 3.48 0.00 0 0 25 2 793.92963 1586.85198 3.82 50.80 5442 5442 MS2 23/28 Linfeng_122411_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 326 3.46 0.00 0 37 25 3 672.36487 2015.08005 -0.41 48.22 5583 5583 MS2 34/68 Linfeng_091311_rIgG_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 306 3.45 0.00 0 8 25 2 688.38843 1375.76958 1.18 29.94 2794 2794 MS2 21/24 Linfeng_122411_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 334 3.31 0.00 0 17 25 3 672.36462 2015.07932 -0.77 48.49 5862 5862 MS2 35/68 Linfeng_091311_rIgG_2.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 389 3.30 0.00 0 40 25 2 887.97028 1774.93328 -2.01 44.98 5170 5170 MS2 21/30 Linfeng_091311_rIgG_1.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 73 3.30 0.00 0 26 25 3 496.30579 1486.90281 2.40 49.45 5274 5274 MS2 28/48 Linfeng_122411_rIgG_2.raw High YPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 216 3.29 0.00 0 12 25 3 707.06342 2119.17569 -1.97 46.51 5365 5365 MS2 29/72 Linfeng_091311_rIgG_1.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 258 3.26 0.00 0 17 25 2 1008.04797 2015.08867 3.87 47.60 5041 5041 MS2 18/34 Linfeng_122411_rIgG_2.raw High TIENKQDAVDYLTWTFLYR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 307 3.26 0.00 1 35 25 3 792.73639 2376.19461 3.16 45.25 4742 4742 MS2 27/72 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 227 3.18 0.00 0 14 25 2 595.34448 1189.68169 2.49 23.27 1923 1923 MS2 19/22 Linfeng_122411_rIgG_2.raw High DEPTGEVLSLVGK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 450 3.17 0.00 0 26 25 2 672.35779 1343.70830 2.19 36.77 3667 3667 MS2 19/24 Linfeng_122411_rIgG_2.raw High QDAVDYLTWTFLYR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 330 3.09 0.00 0 25 25 3 597.63049 1790.87693 1.15 51.16 6197 6197 MS2 19/52 Linfeng_091311_rIgG_2.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 412 3.07 0.00 0 12 25 3 592.31531 1774.93137 -3.09 45.06 5427 5427 MS2 28/60 Linfeng_091311_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 327 3.03 0.00 0 23 25 2 611.31567 1221.62407 1.47 27.81 2511 2511 MS2 18/20 Linfeng_122411_rIgG_2.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 328 3.02 0.00 0 13 25 2 582.29718 1163.58708 2.27 41.31 4239 4239 MS2 14/16 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 475 2.98 0.00 0 34 25 2 793.92883 1586.85039 2.82 51.88 6039 6039 MS2 23/28 Linfeng_091311_rIgG_1.raw High KADEVLEILK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 373 2.94 0.00 1 8 25 3 386.56467 1157.67945 1.53 31.09 2945 2945 MS2 23/36 Linfeng_122411_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 329 2.92 0.00 0 22 25 3 672.36493 2015.08023 -0.32 48.43 5783 5783 MS2 31/68 Linfeng_091311_rIgG_3.raw Medium HLILPEKYPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 30 2.79 0.00 1 26 25 4 738.17834 2949.69155 3.47 43.07 4462 4462 MS2 32/150 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 2.79 0.00 0 59 25 2 793.92700 1586.84673 0.51 52.20 6239 6239 MS2 20/28 Linfeng_091311_rIgG_4.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 272 2.78 0.00 0 66 25 2 595.34521 1189.68315 3.72 22.27 1816 1816 MS2 17/22 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 473 2.69 0.00 0 9 25 2 793.92700 1586.84673 0.51 52.05 6309 6309 MS2 22/28 Linfeng_091311_rIgG_2.raw High KPVIVFVPSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 147 2.64 0.00 0 33 25 3 381.24191 1141.71119 1.69 25.95 2261 2261 MS2 17/36 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 267 2.64 0.00 0 10 25 2 595.34076 1189.67424 -3.77 28.02 2893 2893 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLVQEMVGSFGK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 330 2.63 0.00 0 17 25 2 641.33093 1281.65459 2.94 39.79 4047 4047 MS2 19/22 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 109 2.62 0.00 0 43 25 3 496.30423 1486.89814 -0.74 50.43 5869 5869 MS2 24/48 Linfeng_091311_rIgG_1.raw High YPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 180 2.57 0.00 0 11 25 3 707.06671 2119.18558 2.70 45.47 4770 4770 MS2 21/72 Linfeng_122411_rIgG_2.raw High FYDDAIVSQK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 248 2.55 0.00 0 33 25 2 593.29419 1185.58110 2.05 24.77 2105 2105 MS2 14/18 Linfeng_122411_rIgG_2.raw High TIcAEFAILR Unambiguous 2 1 IPI00420014.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 347 2.53 0.00 0 11 25 2 597.32178 1193.63628 1.27 36.64 3650 3650 MS2 17/18 Linfeng_122411_rIgG_2.raw High MTQNPNYYNLQGISHR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 250 2.52 0.00 0 23 25 3 645.97723 1935.91715 2.12 25.84 2246 2246 MS2 17/60 Linfeng_122411_rIgG_2.raw High MTQNPNYYNLQGISHR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 283 2.51 0.00 0 44 100 3 645.97931 1935.92337 5.33 31.55 3472 3472 MS2 17/60 Linfeng_20120125_PCAF_1.raw High DEPTGEVLSLVGK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 398 2.49 0.00 0 28 100 2 672.36066 1343.71404 6.46 44.13 6492 6492 MS2 15/24 Linfeng_20120125_PCAF_1.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 366 2.49 0.00 0 35 25 2 611.31171 1221.61614 -5.03 29.72 3434 3434 MS2 15/20 Linfeng_091311_rIgG_2.raw Medium GYTLLSEGIDEMVGIIYKPK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 332 2.47 0.00 0 12 25 3 742.73248 2226.18290 4.57 49.81 5320 5320 MS2 22/76 Linfeng_122411_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 352 2.46 0.00 0 12 25 2 611.31268 1221.61809 -3.43 29.89 3145 3145 MS2 16/20 Linfeng_091311_rIgG_1.raw High FYDDAIVSQK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 260 2.41 0.00 0 16 25 2 593.29114 1185.57500 -3.10 28.42 2947 2947 MS2 15/18 Linfeng_091311_rIgG_1.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 305 2.40 0.00 0 6 25 2 582.29419 1163.58110 -2.87 42.25 4817 4817 MS2 14/16 Linfeng_091311_rIgG_1.raw High TNLLLQAHLSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 182 2.40 0.00 0 28 25 2 633.37097 1265.73467 1.72 28.29 2575 2575 MS2 15/20 Linfeng_122411_rIgG_2.raw Medium LYDLNHNEIGELIR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 425 2.38 0.00 0 16 25 3 566.96661 1698.88529 2.51 35.37 3490 3490 MS2 27/52 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 288 2.38 0.00 0 16 100 2 595.34552 1189.68376 4.23 26.87 2356 2356 MS2 16/22 Linfeng_20120125_PCAF_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 281 2.38 0.00 0 54 100 2 688.39185 1375.77641 6.15 35.07 4330 4330 MS2 15/24 Linfeng_20120125_PCAF_1.raw Medium DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 489 2.36 0.00 0 8 25 3 529.62024 1586.84616 0.16 51.87 6037 6037 MS2 26/56 Linfeng_091311_rIgG_1.raw High GWAQLTDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 594 2.34 0.00 0 17 25 2 459.73871 918.47014 2.33 24.39 2058 2058 MS2 13/14 Linfeng_122411_rIgG_2.raw High DTLGLFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 370 2.34 0.00 0 17 25 2 467.77252 934.53777 2.22 39.37 3995 3995 MS2 13/14 Linfeng_122411_rIgG_2.raw High TLVEDLFADK Unambiguous 1 1 IPI00420014.2 CID 1.0000 0.0000 1 1 415 2.32 0.00 0 10 25 2 575.80469 1150.60210 2.61 39.26 3982 3982 MS2 15/18 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 246 2.32 0.00 0 14 100 2 595.34570 1189.68413 4.54 27.07 2405 2405 MS2 16/22 Linfeng_20120125_PCAF_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 262 2.29 0.00 0 18 100 2 688.39246 1375.77764 7.04 35.27 4377 4377 MS2 17/24 Linfeng_20120125_PCAF_1.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 176 2.28 0.00 0 32 100 2 651.30713 1301.60698 4.70 34.39 4163 4163 MS2 15/20 Linfeng_20120125_PCAF_1.raw High KPVIVFVPSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 130 2.25 0.00 0 44 25 2 571.35852 1141.70976 0.45 26.30 2309 2309 MS2 14/18 Linfeng_122411_rIgG_2.raw High EEGWWVVIGDAK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 336 2.24 0.00 0 10 25 2 694.84711 1388.68694 1.70 41.77 4298 4298 MS2 18/22 Linfeng_122411_rIgG_2.raw High EEISATQIIVcTPEK Unambiguous 2 1 IPI00420014.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 353 2.18 0.00 0 36 100 2 859.44318 1717.87908 6.59 36.89 4767 4767 MS2 17/28 Linfeng_20120125_PCAF_1.raw High SPTLYGISHDDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 370 2.16 0.00 0 8 25 2 723.36908 1445.73088 2.59 27.72 2498 2498 MS2 16/24 Linfeng_122411_rIgG_2.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 328 2.15 0.00 0 48 25 2 582.29449 1163.58171 -2.35 42.29 5012 5012 MS2 14/16 Linfeng_091311_rIgG_3.raw High YAQAGFEGFK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 224 2.12 0.00 0 29 25 2 559.27026 1117.53325 1.72 27.37 2452 2452 MS2 15/18 Linfeng_122411_rIgG_2.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 162 2.11 0.00 0 49 100 2 651.30731 1301.60735 4.98 34.20 4117 4117 MS2 17/20 Linfeng_20120125_PCAF_1.raw High TLVEDLFADK Unambiguous 1 1 IPI00420014.2 CID 1.0000 0.0000 1 1 356 2.09 0.00 0 9 25 2 575.80157 1150.59587 -2.80 40.25 4550 4550 MS2 14/18 Linfeng_091311_rIgG_1.raw High SNSLISIK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 417 2.08 0.00 0 48 25 2 431.25400 861.50072 -3.86 27.40 2808 2808 MS2 12/14 Linfeng_091311_rIgG_1.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 330 2.08 0.00 0 33 100 2 611.31793 1221.62859 5.16 30.70 3267 3267 MS2 14/20 Linfeng_20120125_PCAF_1.raw High AIFEIVLNR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 260 2.04 0.00 0 7 25 2 537.81995 1074.63262 1.82 38.15 3842 3842 MS2 15/16 Linfeng_122411_rIgG_2.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 171 2.02 0.00 0 43 100 2 651.30750 1301.60771 5.26 34.51 4194 4194 MS2 14/20 Linfeng_20120125_PCAF_1.raw High KADEVLEILK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 364 2.00 0.00 1 26 100 2 579.34570 1157.68413 5.57 42.42 6076 6076 MS2 13/18 Linfeng_20120125_PCAF_1.raw IPI00440493.2 "ATP synthase subunit alpha, mitochondrial" 19.53 5 8 8 8 0.00 24.69 19.53 8 8 0.00 553 59.7 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EVAAFAQFGSDLDAATQQLLSR Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 375 5.68 0.00 0 8 25 3 780.06250 2338.17295 2.34 50.10 5731 5731 MS2 38/84 Linfeng_122411_rIgG_5.raw High ILGADTSVDLEETGR Unambiguous 5 1 IPI00440493.2 CID 1.0000 0.0000 1 1 343 3.53 0.00 0 12 25 2 788.39594 1575.78459 -0.98 30.43 3091 3091 MS2 25/28 Linfeng_122411_rIgG_5.raw High FENAFLSHVVSQHQALLGTIR Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 273 3.09 0.00 0 48 17 4 592.56946 2367.25600 -0.37 38.48 4201 4201 MS2 41/120 Linfeng_122411_rIgG_5.raw High TGAIVDVPVGEELLGR Unambiguous 4 1 IPI00440493.2 CID 1.0000 0.0000 1 1 393 2.99 0.00 0 33 25 3 542.30212 1624.89182 0.77 38.98 4268 4268 MS2 28/60 Linfeng_122411_rIgG_5.raw High EIVTNFLAGFEA Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 298 2.65 0.00 0 22 25 2 655.83582 1310.66435 1.22 48.84 5571 5571 MS2 18/22 Linfeng_122411_rIgG_5.raw High LKEIVTNFLAGFEA Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 343 2.33 0.00 1 17 25 2 776.42480 1551.84233 0.34 44.76 5046 5046 MS2 18/26 Linfeng_122411_rIgG_5.raw High VLSIGDGIAR Unambiguous 5 1 IPI00440493.2 CID 1.0000 0.0000 1 1 385 2.25 0.00 0 34 25 2 500.79266 1000.57805 -0.58 27.64 2707 2707 MS2 15/18 Linfeng_122411_rIgG_5.raw High AVDSLVPIGR Unambiguous 4 1 IPI00440493.2 CID 1.0000 0.0000 1 1 241 2.17 0.00 0 14 16 2 513.79987 1026.59245 -1.78 29.78 3002 3002 MS2 14/18 Linfeng_122411_rIgG_5.raw IPI00444262.3 "cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin" 24.21 4 13 13 30 35.91 16.58 8 12 42.13 19.57 8 13 11.05 11.28 5 5 603 65.9 4.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 367 5.37 0.00 0 9 25 3 771.39258 2312.16318 3.17 46.32 4875 4875 MS2 34/80 Linfeng_122411_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 348 5.30 0.00 0 4 25 3 834.42999 2501.27542 3.84 47.88 5075 5075 MS2 36/84 Linfeng_122411_rIgG_3.raw High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 347 5.28 0.00 0 31 25 3 771.39032 2312.15641 0.24 47.40 5652 5652 MS2 34/80 Linfeng_091311_rIgG_3.raw High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 344 4.44 0.00 0 14 25 3 771.39178 2312.16080 2.14 46.15 4963 4963 MS2 30/80 Linfeng_122411_rIgG_4.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 352 4.43 0.00 0 13 25 3 834.42639 2501.26462 -0.48 48.95 5848 5848 MS2 36/84 Linfeng_091311_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 351 4.25 0.00 0 22 25 3 834.42731 2501.26737 0.61 49.11 5867 5867 MS2 34/84 Linfeng_091311_rIgG_4.raw High VTQDELKEVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 337 4.05 0.00 1 3 25 3 664.67072 1991.99759 2.74 41.29 4223 4223 MS2 33/64 Linfeng_122411_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 305 3.61 0.00 0 39 25 2 1251.13721 2501.26714 0.52 49.05 5860 5860 MS2 17/42 Linfeng_091311_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 338 3.43 0.00 0 12 25 3 834.43054 2501.27707 4.49 47.77 5167 5167 MS2 32/84 Linfeng_122411_rIgG_4.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 481 2.82 0.00 0 12 25 2 500.77618 1000.54509 2.85 25.69 2201 2201 MS2 15/16 Linfeng_122411_rIgG_3.raw High AIRLELQGPR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 141 2.81 0.00 1 38 25 3 384.90097 1152.68836 3.06 23.36 1904 1904 MS2 20/36 Linfeng_122411_rIgG_3.raw High GLSEDTTEETLKESFDGSVR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 219 2.77 0.00 1 3 25 3 734.01514 2200.03086 2.53 33.31 3201 3201 MS2 35/76 Linfeng_122411_rIgG_3.raw High GLSEDTTEETLK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 233 2.57 0.00 0 3 25 2 661.81787 1322.62847 -2.85 24.38 2665 2665 MS2 16/22 Linfeng_091311_rIgG_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 480 2.52 0.00 0 22 25 2 580.79419 1160.58110 -1.98 29.90 3421 3421 MS2 14/18 Linfeng_091311_rIgG_3.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 486 2.42 0.00 0 25 25 2 500.77545 1000.54363 1.38 26.30 2425 2425 MS2 15/16 Linfeng_122411_rIgG_4.raw Medium AIRLELQGPR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 144 2.38 0.00 1 52 25 3 384.90106 1152.68863 3.30 22.34 1793 1793 MS2 18/36 Linfeng_122411_rIgG_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 482 2.35 0.00 0 45 25 2 580.79651 1160.58574 2.02 28.15 2527 2527 MS2 13/18 Linfeng_122411_rIgG_3.raw Medium GLSEDTTEETLKESFDGSVR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 261 2.33 0.00 1 36 100 3 734.01868 2200.04148 7.36 41.10 4827 4827 MS2 27/76 Linfeng_20120125_PCAF_3.raw High VTQDELK Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 714 2.29 0.00 0 62 25 2 416.72299 832.43871 -2.89 16.17 1518 1518 MS2 9/12 Linfeng_091311_rIgG_3.raw High GFGFVDFNSEEDAK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 95 2.28 0.00 0 29 100 2 781.34912 1561.69097 6.63 46.07 6021 6021 MS2 17/26 Linfeng_20120125_PCAF_3.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 369 2.26 0.00 0 14 25 2 500.77338 1000.53948 -2.76 28.55 3238 3238 MS2 15/16 Linfeng_091311_rIgG_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 290 2.25 0.00 0 21 25 2 589.78668 1178.56609 -2.35 29.82 3410 3410 MS2 15/18 Linfeng_091311_rIgG_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 310 2.19 0.00 0 39 100 2 589.79224 1178.57720 7.07 31.10 2658 2658 MS2 16/18 Linfeng_20120125_PCAF_3.raw High FGYVDFESAEDLEK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 112 2.17 0.00 0 14 100 2 824.87799 1648.74870 6.63 45.93 5987 5987 MS2 19/26 Linfeng_20120125_PCAF_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 483 2.16 0.00 0 30 25 2 580.79419 1160.58110 -1.98 30.04 3433 3433 MS2 14/18 Linfeng_091311_rIgG_4.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 257 2.15 0.00 0 13 25 2 469.25189 937.49651 -2.63 31.66 3655 3655 MS2 13/16 Linfeng_091311_rIgG_3.raw High VTQDELK Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 591 2.13 0.00 0 44 25 2 416.72357 832.43987 -1.49 16.40 1539 1539 MS2 9/12 Linfeng_091311_rIgG_4.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 480 2.08 0.00 0 26 100 2 580.79968 1160.59209 7.49 31.68 2769 2769 MS2 14/18 Linfeng_20120125_PCAF_3.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 259 2.01 0.00 0 22 25 2 469.25369 937.50011 1.21 30.18 2939 2939 MS2 12/16 Linfeng_122411_rIgG_4.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 253 2.00 0.00 0 19 25 2 469.25391 937.50054 1.67 30.00 2772 2772 MS2 13/16 Linfeng_122411_rIgG_3.raw IPI00450768.7 "Keratin, type I cytoskeletal 17" 33.10 8 5 15 109 92.54 16.90 8 37 69.41 18.29 9 24 117.52 16.90 7 48 432 48.1 5.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 191 5.10 0.00 0 3 25 2 1034.57690 2068.14653 3.26 41.02 3953 3953 MS2 24/36 Linfeng_122411_rIgG_9.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 226 4.97 0.00 0 3 25 3 690.05365 2068.14640 3.19 40.87 4049 4049 MS2 42/72 Linfeng_122411_rIgG_10.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 207 4.90 0.00 0 4 25 3 690.05334 2068.14548 2.75 41.52 4016 4016 MS2 40/72 Linfeng_122411_rIgG_9.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 361 4.63 0.00 1 10 100 3 702.02740 2104.06766 7.56 28.01 2295 2295 MS2 34/72 Linfeng_20120125_PCAF_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 373 3.74 0.00 1 13 100 3 702.02783 2104.06894 8.17 27.81 2257 2257 MS2 32/72 Linfeng_20120125_PCAF_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 3.47 0.00 1 11 100 3 702.02704 2104.06656 7.03 28.06 2306 2306 MS2 28/72 Linfeng_20120125_PCAF_2.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 3.45 0.00 1 3 100 3 702.02704 2104.06656 7.03 27.55 2394 2394 MS2 29/72 Linfeng_20120125_PCAF_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 441 3.32 0.00 0 5 1 2 673.34503 1345.68279 -1.36 3.61 341 341 MS2 18/22 Linfeng_122411_rIgG_9.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 207 3.15 0.00 0 25 25 3 690.05322 2068.14511 2.57 40.12 3839 3839 MS2 32/72 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High TEELNREVATNSELVQSGK Unambiguous 7 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 3.07 0.00 1 26 100 3 702.02667 2104.06546 6.51 27.53 2210 2210 MS2 29/72 Linfeng_20120125_PCAF_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 3.00 0.00 0 5 25 2 681.34723 1361.68718 -2.63 21.80 2277 2277 MS2 20/24 Linfeng_091311_rIgG_7.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 2.99 0.00 0 13 25 2 681.34735 1361.68743 -2.45 21.72 2294 2294 MS2 20/24 Linfeng_091311_rIgG_6.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.92 0.00 0 10 25 2 681.34717 1361.68706 -2.72 21.41 2280 2280 MS2 19/24 Linfeng_091311_rIgG_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 360 2.85 0.00 0 9 25 2 681.34778 1361.68828 -1.82 21.55 2263 2263 MS2 19/24 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.84 0.00 0 1 25 2 681.34705 1361.68682 -2.90 21.69 2254 2254 MS2 20/24 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.83 0.00 1 4 100 2 690.37207 1379.73686 6.57 36.42 3797 3797 MS2 15/20 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLTQYK Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 468 2.83 0.00 0 33 100 2 758.89142 1516.77556 7.46 28.51 2223 2223 MS2 18/24 Linfeng_20120125_PCAF_3.raw High LLEGEDAHLTQYK Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 446 2.76 0.00 0 29 100 2 758.89105 1516.77483 6.97 28.66 2248 2248 MS2 17/24 Linfeng_20120125_PCAF_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.75 0.00 1 1 100 2 690.37219 1379.73711 6.75 36.06 3719 3719 MS2 16/20 Linfeng_20120125_PCAF_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 324 2.75 0.00 1 28 100 2 593.35492 1185.70256 6.33 41.42 4792 4792 MS2 14/18 Linfeng_20120125_PCAF_2.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 365 2.74 0.00 0 21 25 2 681.34790 1361.68852 -1.64 21.53 2267 2267 MS2 18/24 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 465 2.71 0.00 0 26 25 2 673.34747 1345.68767 2.27 25.85 2010 2010 MS2 18/22 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High LSVEADINGLR Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 412 2.67 0.00 0 24 25 2 593.82605 1186.64482 1.80 31.14 2702 2702 MS2 19/20 Linfeng_122411_rIgG_9.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 2.65 0.00 0 7 25 2 681.34723 1361.68718 -2.63 20.04 1805 1805 MS2 19/24 Linfeng_091311_rIgG_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 404 2.64 0.00 1 27 100 3 460.58389 1379.73713 6.76 35.73 4487 4487 MS2 23/40 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 488 2.61 0.00 0 5 100 2 515.30438 1029.60149 7.33 37.04 3939 3939 MS2 15/16 Linfeng_20120125_PCAF_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.50 0.00 1 13 100 2 690.37152 1379.73577 5.77 36.52 3851 3851 MS2 15/20 Linfeng_20120125_PCAF_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 334 2.48 0.00 1 24 100 2 593.35553 1185.70378 7.36 41.29 4766 4766 MS2 13/18 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.46 0.00 1 0 100 2 690.37231 1379.73735 6.92 35.59 3613 3613 MS2 15/20 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 379 2.43 0.00 1 12 100 2 690.37231 1379.73735 6.92 35.43 3651 3651 MS2 14/20 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 372 2.41 0.00 1 12 100 2 690.37140 1379.73552 5.60 36.68 3885 3885 MS2 13/20 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.39 0.00 1 25 100 2 690.37201 1379.73674 6.48 35.31 4387 4387 MS2 15/20 Linfeng_20120125_PCAF_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 394 2.37 0.00 1 63 100 3 460.58411 1379.73777 7.22 36.22 3795 3795 MS2 19/40 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 355 2.36 0.00 1 9 100 2 690.37183 1379.73638 6.21 35.61 4035 4035 MS2 13/20 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LLEGEDAHLTQYK Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 440 2.34 0.00 0 30 100 2 758.89130 1516.77532 7.29 28.67 2250 2250 MS2 16/24 Linfeng_20120125_PCAF_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 371 2.31 0.00 1 4 100 2 690.37256 1379.73784 7.28 36.41 3960 3960 MS2 14/20 Linfeng_20120125_PCAF_9.raw High ILNEMRDQYEK Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 322 2.31 0.00 1 4 100 2 719.85785 1438.70842 6.17 21.88 1548 1548 MS2 14/20 Linfeng_20120125_PCAF_2.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 428 2.30 0.00 0 44 25 2 673.34363 1345.67998 -3.45 27.03 3067 3067 MS2 17/22 Linfeng_091311_rIgG_2.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 43 100 3 460.58365 1379.73639 6.23 35.93 4536 4536 MS2 16/40 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High LLEGEDAHLTQYK Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 448 2.25 0.00 0 50 100 2 758.89050 1516.77373 6.25 28.46 2214 2214 MS2 15/24 Linfeng_20120125_PCAF_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 354 2.24 0.00 1 26 100 2 690.37262 1379.73796 7.36 35.53 4016 4016 MS2 13/20 Linfeng_20120125_PCAF_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.23 0.00 1 15 100 2 532.81219 1064.61711 6.76 23.08 1526 1526 MS2 14/16 Linfeng_20120125_PCAF_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 380 2.22 0.00 1 2 100 2 690.37244 1379.73760 7.10 35.64 3625 3625 MS2 15/20 Linfeng_20120125_PCAF_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 509 2.22 0.00 0 3 66 2 515.30414 1029.60100 6.86 37.00 3951 3951 MS2 15/16 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 253 2.21 0.00 1 5 100 2 532.81219 1064.61711 6.76 24.65 1757 1757 MS2 14/16 Linfeng_20120125_PCAF_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 362 2.19 0.00 1 20 100 2 690.37177 1379.73625 6.13 34.43 4322 4322 MS2 14/20 Linfeng_20120125_PCAF_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 260 2.17 0.00 1 4 98 2 532.81287 1064.61846 8.03 24.50 1780 1780 MS2 14/16 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 524 2.16 0.00 0 12 100 2 515.30396 1029.60063 6.50 37.02 4799 4799 MS2 15/16 Linfeng_20120125_PCAF_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.16 0.00 1 37 100 2 690.37134 1379.73540 5.51 36.33 4632 4632 MS2 13/20 Linfeng_20120125_PCAF_1.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 255 2.15 0.00 1 3 100 2 532.81250 1064.61772 7.34 24.73 1765 1765 MS2 14/16 Linfeng_20120125_PCAF_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 398 2.14 0.00 1 25 100 2 690.37219 1379.73711 6.75 35.10 4337 4337 MS2 12/20 Linfeng_20120125_PCAF_1.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 344 2.13 0.00 1 33 100 2 593.35608 1185.70488 8.28 41.20 4749 4749 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.13 0.00 1 4 100 2 532.81171 1064.61614 5.85 24.51 1743 1743 MS2 14/16 Linfeng_20120125_PCAF_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 578 2.13 0.00 0 39 100 2 515.30377 1029.60027 6.14 36.20 3741 3741 MS2 14/16 Linfeng_20120125_PCAF_7.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.12 0.00 0 48 25 2 673.34332 1345.67937 -3.90 27.22 2782 2782 MS2 17/22 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 563 2.11 0.00 0 29 100 2 515.30328 1029.59929 5.20 37.84 4111 4111 MS2 14/16 Linfeng_20120125_PCAF_2.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 530 2.10 0.00 0 16 100 2 515.30396 1029.60063 6.50 36.70 4029 4029 MS2 15/16 Linfeng_20120125_PCAF_9.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 259 2.10 0.00 1 21 100 2 532.81287 1064.61846 8.03 24.23 1795 1795 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High NHEEEMNALR Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 55 2.08 0.00 0 7 25 2 621.77930 1242.55132 -1.53 20.04 2019 2019 MS2 13/18 Linfeng_091311_rIgG_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 382 2.08 0.00 1 5 100 2 690.37201 1379.73674 6.48 35.56 3866 3866 MS2 13/20 Linfeng_20120125_PCAF_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 385 2.06 0.00 1 23 100 2 690.37195 1379.73662 6.39 35.04 4322 4322 MS2 12/20 Linfeng_20120125_PCAF_1.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 258 2.05 0.00 1 24 100 2 532.81268 1064.61809 7.68 23.42 1525 1525 MS2 14/16 Linfeng_20120125_PCAF_3.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 256 2.05 0.00 1 4 32 2 532.81201 1064.61675 6.42 24.00 1820 1820 MS2 15/16 Linfeng_20120125_PCAF_6.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 266 2.05 0.00 1 9 100 2 532.81177 1064.61626 5.96 23.83 1864 1864 MS2 14/16 Linfeng_20120125_PCAF_5.raw High LASYLDKVR Unambiguous 19 4 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00217963.3;IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 409 2.01 0.00 1 45 100 2 690.37085 1379.73442 4.80 36.41 4652 4652 MS2 14/20 Linfeng_20120125_PCAF_1.raw High LSGGLGAGScR Unambiguous 4 1 IPI00450768.7 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 308 2.01 0.00 0 6 25 2 517.75354 1034.49980 -4.84 19.58 1955 1955 MS2 15/20 Linfeng_091311_rIgG_5.raw IPI00453473.6 Histone H4 57.28 1 13 13 260 123.63 51.46 6 48 228.80 57.28 13 83 316.10 52.43 7 129 103 11.4 11.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 4.54 0.00 1 21 25 3 702.37030 2105.09635 -3.00 44.04 4457 4457 MS2 32/68 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 327 4.45 0.00 1 5 15 3 480.27133 1438.79944 1.36 35.38 3346 3346 MS2 31/48 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 366 4.39 0.00 1 1 8 3 480.26913 1438.79285 -3.22 36.34 4374 4374 MS2 31/48 Linfeng_091311_rIgG_10.raw High KTVTAMDVVYALKR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 236 4.38 0.00 2 7 25 3 532.30499 1594.90042 1.14 33.19 3064 3064 MS2 32/52 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 329 4.00 0.00 1 38 25 3 480.27170 1438.80054 2.13 35.47 3257 3257 MS2 29/48 Linfeng_122411_rIgG_9.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 268 3.86 0.00 1 1 88 3 480.27393 1438.80722 6.77 48.31 7501 7501 MS2 28/48 Linfeng_20120125_PCAF_1.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 3.60 0.00 0 3 12 3 437.57272 1310.70362 0.84 39.57 3880 3880 MS2 32/44 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 3.56 0.00 0 3 15 3 437.57117 1310.69895 -2.72 40.48 4905 4905 MS2 28/44 Linfeng_091311_rIgG_10.raw High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 387 3.40 0.00 1 46 25 3 702.37421 2105.10807 2.57 44.40 4543 4543 MS2 29/68 Linfeng_122411_rIgG_8.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 292 3.34 0.00 1 34 25 2 719.90363 1438.79997 1.73 35.46 3356 3356 MS2 20/24 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 351 3.34 0.00 0 25 25 2 590.81232 1180.61736 -2.98 30.01 3162 3162 MS2 17/18 Linfeng_091311_rIgG_1.raw High GVLKVFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 47 3.33 0.00 1 16 25 3 462.95477 1386.84977 2.12 44.98 4575 4575 MS2 23/44 Linfeng_122411_rIgG_10.raw High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 385 3.33 0.00 1 31 25 3 702.37445 2105.10880 2.92 44.40 4383 4383 MS2 30/68 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 310 3.29 0.00 0 44 23 2 590.81354 1180.61980 -0.91 0.06 9 9 MS2 17/18 Linfeng_122411_rIgG_1.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 247 3.24 0.00 1 6 100 2 719.90747 1438.80766 7.08 48.30 7497 7497 MS2 22/24 Linfeng_20120125_PCAF_1.raw High ISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 226 3.23 0.00 1 11 25 2 789.44995 1577.89263 1.79 32.62 2992 2992 MS2 19/26 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 389 3.21 0.00 0 21 25 2 590.81421 1180.62114 0.23 27.45 2680 2680 MS2 17/18 Linfeng_122411_rIgG_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 3.16 0.00 0 13 4 2 590.81519 1180.62309 1.88 3.11 277 277 MS2 17/18 Linfeng_122411_rIgG_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 3.15 0.00 0 15 25 2 590.81268 1180.61809 -2.36 29.79 3503 3503 MS2 17/18 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 3.11 0.00 0 52 25 2 663.37756 1325.74785 -4.37 26.39 3032 3032 MS2 18/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 386 3.10 0.00 0 5 1 2 590.81421 1180.62114 0.23 25.42 2031 2031 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 3.10 0.00 0 15 25 2 590.81262 1180.61797 -2.46 30.05 3404 3404 MS2 17/18 Linfeng_091311_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 373 3.09 0.00 0 4 21 2 590.81598 1180.62468 3.23 25.57 1980 1980 MS2 17/18 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 394 3.08 0.00 0 8 25 2 590.81488 1180.62248 1.37 27.94 2529 2529 MS2 17/18 Linfeng_122411_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 369 3.08 0.00 0 12 25 2 590.81274 1180.61821 -2.25 30.16 3419 3419 MS2 17/18 Linfeng_091311_rIgG_7.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 325 3.07 0.00 0 24 25 2 567.77661 1134.54595 2.94 16.80 1274 1274 MS2 14/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 3.05 0.00 0 13 25 2 590.81500 1180.62273 1.57 28.01 2509 2509 MS2 17/18 Linfeng_122411_rIgG_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 3.04 0.00 0 26 25 2 590.81299 1180.61870 -1.84 29.89 3419 3419 MS2 17/18 Linfeng_091311_rIgG_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 350 3.02 0.00 0 5 18 2 590.81537 1180.62346 2.19 28.78 2811 2811 MS2 17/18 Linfeng_122411_rIgG_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 347 3.01 0.00 0 5 3 2 590.81812 1180.62895 6.85 31.44 3118 3118 MS2 17/18 Linfeng_20120125_PCAF_10.raw High RISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 217 3.01 0.00 2 12 25 3 578.66669 1733.98551 -3.12 32.08 2920 2920 MS2 26/56 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 339 3.00 0.00 0 4 5 2 590.81763 1180.62798 6.02 31.12 3367 3367 MS2 17/18 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.99 0.00 0 7 15 2 590.81506 1180.62285 1.68 28.15 2670 2670 MS2 17/18 Linfeng_122411_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 2.99 0.00 0 5 3 2 590.81775 1180.62822 6.23 31.85 3218 3218 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 336 2.99 0.00 0 5 4 2 590.81812 1180.62895 6.85 31.16 3053 3053 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 362 2.98 0.00 0 37 25 2 590.81274 1180.61821 -2.25 30.09 3426 3426 MS2 17/18 Linfeng_091311_rIgG_6.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 221 2.97 0.00 0 7 100 2 663.38531 1325.76335 7.33 22.64 1490 1490 MS2 16/22 Linfeng_20120125_PCAF_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.96 0.00 0 30 25 2 590.81287 1180.61846 -2.05 29.93 3417 3417 MS2 17/18 Linfeng_091311_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 386 2.96 0.00 0 6 25 2 590.81604 1180.62480 3.33 26.44 2165 2165 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 334 2.96 0.00 0 5 6 2 590.81854 1180.62981 7.57 31.05 3028 3028 MS2 17/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 240 2.96 0.00 0 4 12 2 663.37866 1325.75005 -2.71 25.13 2854 2854 MS2 18/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 380 2.95 0.00 0 25 25 2 590.81586 1180.62444 3.02 52.20 5466 5466 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.95 0.00 0 15 25 2 590.81122 1180.61516 -4.84 30.85 3648 3648 MS2 17/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 319 2.94 0.00 0 16 25 2 590.81305 1180.61882 -1.74 28.73 2470 2470 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.93 0.00 0 14 25 2 590.81549 1180.62370 2.40 28.88 2406 2406 MS2 17/18 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 349 2.93 0.00 0 5 25 2 590.81512 1180.62297 1.78 26.79 2296 2296 MS2 17/18 Linfeng_122411_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 225 2.93 0.00 0 3 31 2 663.38580 1325.76433 8.06 23.54 1686 1686 MS2 18/22 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 2.90 0.00 0 5 5 2 590.81842 1180.62956 7.36 31.10 3040 3040 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 337 2.89 0.00 0 5 3 2 590.81818 1180.62908 6.95 31.56 3146 3146 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 383 2.89 0.00 0 19 25 2 590.81250 1180.61772 -2.67 30.10 3474 3474 MS2 17/18 Linfeng_091311_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 347 2.88 0.00 0 5 5 2 590.81812 1180.62895 6.85 31.99 3251 3251 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 376 2.87 0.00 0 9 25 3 394.21268 1180.62348 2.21 25.93 2097 2097 MS2 24/36 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 259 2.87 0.00 0 10 25 2 663.37653 1325.74578 -5.93 26.45 3040 3040 MS2 17/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 340 2.86 0.00 0 4 9 2 590.81860 1180.62993 7.67 30.83 2983 2983 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 303 2.84 0.00 0 22 100 2 590.81909 1180.63091 8.50 31.25 3507 3507 MS2 16/18 Linfeng_20120125_PCAF_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 408 2.83 0.00 0 47 25 2 590.81580 1180.62432 2.92 28.87 2281 2281 MS2 16/18 Linfeng_122411_rIgG_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 343 2.83 0.00 0 5 7 2 590.81824 1180.62920 7.05 30.94 3006 3006 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 338 2.83 0.00 0 5 2 2 590.81769 1180.62810 6.12 31.66 3171 3171 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 380 2.82 0.00 0 36 25 3 394.21249 1180.62293 1.74 26.98 2320 2320 MS2 23/36 Linfeng_122411_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 293 2.82 0.00 0 8 25 3 442.59042 1325.75672 2.32 24.07 1871 1871 MS2 21/44 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 350 2.82 0.00 0 6 30 2 590.81812 1180.62895 6.85 32.16 3617 3617 MS2 17/18 Linfeng_20120125_PCAF_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 246 2.82 0.00 0 3 1 2 663.38263 1325.75798 3.27 3.06 269 269 MS2 19/22 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 268 2.81 0.00 0 2 3 2 663.38129 1325.75530 1.25 3.15 271 271 MS2 17/22 Linfeng_122411_rIgG_8.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 390 2.80 0.00 1 5 0 3 446.24503 1336.72052 -1.10 3.69 372 372 MS2 23/40 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 333 2.80 0.00 0 15 100 2 590.81738 1180.62749 5.61 33.70 3993 3993 MS2 17/18 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 383 2.79 0.00 0 29 25 3 394.20990 1180.61515 -4.85 30.02 3536 3536 MS2 20/36 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 405 2.78 0.00 0 13 25 2 590.81641 1180.62554 3.95 28.76 2054 2054 MS2 15/18 Linfeng_122411_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 372 2.77 0.00 0 36 25 2 590.81567 1180.62407 2.71 51.17 5345 5345 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 218 2.77 0.00 1 9 25 2 789.45093 1577.89458 3.03 32.79 2919 2919 MS2 18/26 Linfeng_122411_rIgG_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 231 2.76 0.00 0 5 100 2 663.38507 1325.76286 6.96 22.54 1533 1533 MS2 18/22 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 22 25 2 590.81567 1180.62407 2.71 54.23 5686 5686 MS2 16/18 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 217 2.75 0.00 0 3 12 2 663.38531 1325.76335 7.33 23.56 1870 1870 MS2 17/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 364 2.75 0.00 0 5 100 2 590.81781 1180.62834 6.33 35.28 4029 4029 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.74 0.00 0 20 25 2 590.81519 1180.62309 1.88 28.98 2578 2578 MS2 17/18 Linfeng_122411_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 237 2.74 0.00 0 17 100 2 663.38513 1325.76299 7.05 24.91 1922 1922 MS2 18/22 Linfeng_20120125_PCAF_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 228 2.74 0.00 0 8 100 2 663.38550 1325.76372 7.60 23.86 1734 1734 MS2 18/22 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 339 2.73 0.00 0 6 3 2 590.81775 1180.62822 6.23 31.73 3187 3187 MS2 17/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 241 2.73 0.00 0 5 25 2 663.37927 1325.75127 -1.79 23.06 2053 2053 MS2 18/22 Linfeng_122411_rIgG_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 393 2.72 0.00 0 26 25 2 590.81598 1180.62468 3.23 53.21 5580 5580 MS2 17/18 Linfeng_122411_rIgG_10.raw Medium VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 375 2.72 0.00 1 18 25 4 527.03119 2105.10293 0.13 43.99 4451 4451 MS2 29/102 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALKR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 278 2.72 0.00 1 2 25 2 733.90668 1466.80608 1.67 36.62 3505 3505 MS2 18/24 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 305 2.72 0.00 0 3 18 2 663.37628 1325.74529 -6.30 25.14 2508 2508 MS2 18/22 Linfeng_091311_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 354 2.71 0.00 0 63 52 2 590.81824 1180.62920 7.05 30.09 3119 3119 MS2 17/18 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.71 0.00 0 9 100 2 590.81842 1180.62956 7.36 31.43 2724 2724 MS2 17/18 Linfeng_20120125_PCAF_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 237 2.71 0.00 0 12 25 2 663.37866 1325.75005 -2.71 25.47 2784 2784 MS2 16/22 Linfeng_091311_rIgG_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 223 2.70 0.00 0 4 100 2 663.38544 1325.76360 7.51 23.89 1739 1739 MS2 18/22 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 349 2.70 0.00 0 13 100 2 590.81830 1180.62932 7.16 31.48 3101 3101 MS2 17/18 Linfeng_20120125_PCAF_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 368 2.68 0.00 0 44 25 2 590.81561 1180.62395 2.61 50.14 5224 5224 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 5 100 2 590.81824 1180.62920 7.05 31.60 2913 2913 MS2 17/18 Linfeng_20120125_PCAF_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 19 100 2 590.81842 1180.62956 7.36 30.99 2645 2645 MS2 17/18 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 6 100 2 590.81732 1180.62737 5.50 35.22 4014 4014 MS2 16/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 212 2.67 0.00 0 21 100 2 663.38434 1325.76140 5.85 22.70 1694 1694 MS2 16/22 Linfeng_20120125_PCAF_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 343 2.67 0.00 0 39 100 2 590.81842 1180.62956 7.36 32.68 3417 3417 MS2 16/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 345 2.67 0.00 0 6 52 2 590.81830 1180.62932 7.16 30.27 2875 2875 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.65 0.00 0 5 100 2 590.81854 1180.62981 7.57 31.29 2703 2703 MS2 17/18 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 365 2.65 0.00 0 15 100 2 590.81836 1180.62944 7.26 31.09 2665 2665 MS2 17/18 Linfeng_20120125_PCAF_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 247 2.65 0.00 0 21 25 2 663.38245 1325.75762 3.00 24.08 1872 1872 MS2 16/22 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 256 2.64 0.00 0 8 25 3 442.58801 1325.74948 -3.14 23.04 2050 2050 MS2 19/44 Linfeng_122411_rIgG_6.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 221 2.64 0.00 0 2 100 2 663.38550 1325.76372 7.60 24.57 1978 1978 MS2 17/22 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 204 2.64 0.00 0 16 100 2 663.38501 1325.76274 6.87 31.04 3025 3025 MS2 16/22 Linfeng_20120125_PCAF_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.64 0.00 0 5 4 2 655.85608 1310.70488 1.81 39.56 3879 3879 MS2 19/22 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 402 2.64 0.00 0 34 25 2 590.81598 1180.62468 3.23 44.51 4515 4515 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 331 2.61 0.00 0 6 3 2 590.81805 1180.62883 6.74 31.34 3093 3093 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 362 2.61 0.00 0 10 100 2 590.81848 1180.62969 7.47 29.99 2820 2820 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.61 0.00 0 4 100 2 590.81793 1180.62859 6.54 32.00 2989 2989 MS2 17/18 Linfeng_20120125_PCAF_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 370 2.60 0.00 0 41 25 2 590.81555 1180.62383 2.50 47.08 4844 4844 MS2 17/18 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 239 2.60 0.00 0 12 25 2 663.37897 1325.75066 -2.25 28.22 3287 3287 MS2 17/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 355 2.58 0.00 0 22 100 2 590.81854 1180.62981 7.57 29.82 2792 2792 MS2 16/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 311 2.58 0.00 0 20 100 2 590.81866 1180.63005 7.78 31.89 3181 3181 MS2 17/18 Linfeng_20120125_PCAF_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 275 2.58 0.00 0 36 25 2 567.77234 1134.53740 -4.59 17.74 1808 1808 MS2 16/18 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 232 2.57 0.00 0 6 100 2 663.38531 1325.76335 7.33 23.66 1694 1694 MS2 17/22 Linfeng_20120125_PCAF_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 377 2.57 0.00 0 57 25 3 394.21283 1180.62394 2.60 24.91 1971 1971 MS2 23/36 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 224 2.56 0.00 0 39 100 3 442.59201 1325.76148 5.91 24.88 1914 1914 MS2 20/44 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 2.56 0.00 0 34 25 2 590.81226 1180.61724 -3.08 32.78 3907 3907 MS2 16/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 373 2.55 0.00 0 40 25 2 590.81561 1180.62395 2.61 49.14 5104 5104 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.54 0.00 0 21 100 2 590.81854 1180.62981 7.57 31.86 3176 3176 MS2 17/18 Linfeng_20120125_PCAF_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.54 0.00 0 45 25 2 590.81219 1180.61711 -3.18 29.89 3457 3457 MS2 17/18 Linfeng_091311_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 353 2.54 0.00 0 10 100 2 590.81842 1180.62956 7.36 31.24 2694 2694 MS2 17/18 Linfeng_20120125_PCAF_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 296 2.54 0.00 0 6 1 3 442.59021 1325.75608 1.84 3.07 270 270 MS2 18/44 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 343 2.54 0.00 0 30 100 2 590.81830 1180.62932 7.16 30.82 2617 2617 MS2 16/18 Linfeng_20120125_PCAF_7.raw Medium KTVTAMDVVYALKR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 222 2.53 0.00 2 2 16 4 399.48071 1594.90102 1.52 33.18 3063 3063 MS2 37/78 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.53 0.00 0 5 100 2 590.81812 1180.62895 6.85 35.36 4047 4047 MS2 17/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 262 2.53 0.00 0 8 12 2 663.38025 1325.75322 -0.32 3.58 362 362 MS2 17/22 Linfeng_122411_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.52 0.00 0 7 100 2 590.81812 1180.62895 6.85 31.68 2972 2972 MS2 17/18 Linfeng_20120125_PCAF_4.raw Medium VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 396 2.51 0.00 1 25 25 4 527.03253 2105.10830 2.68 44.12 4707 4707 MS2 27/102 Linfeng_122411_rIgG_4.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.51 0.00 0 9 4 2 495.29251 989.57775 -0.15 0.56 81 81 MS2 12/14 Linfeng_122411_rIgG_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 243 2.51 0.00 0 19 25 2 663.37860 1325.74993 -2.80 25.47 2845 2845 MS2 14/22 Linfeng_091311_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 365 2.51 0.00 0 4 100 2 590.81812 1180.62895 6.85 31.93 2811 2811 MS2 17/18 Linfeng_20120125_PCAF_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 284 2.50 0.00 0 3 1 3 442.58963 1325.75434 0.52 3.14 269 269 MS2 20/44 Linfeng_122411_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 401 2.50 0.00 0 29 25 2 590.81384 1180.62041 -0.39 27.70 2331 2331 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.50 0.00 0 52 100 2 590.81854 1180.62981 7.57 29.68 2768 2768 MS2 16/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.50 0.00 0 9 100 2 590.81824 1180.62920 7.05 31.61 2760 2760 MS2 17/18 Linfeng_20120125_PCAF_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 292 2.49 0.00 0 4 13 2 495.29382 989.58037 2.50 33.56 3017 3017 MS2 13/14 Linfeng_122411_rIgG_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 235 2.49 0.00 0 5 100 2 663.38513 1325.76299 7.05 22.55 1720 1720 MS2 15/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.48 0.00 0 11 100 2 590.81848 1180.62969 7.47 30.05 2834 2834 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 11 100 2 590.81775 1180.62822 6.23 1.66 160 160 MS2 16/18 Linfeng_20120125_PCAF_2.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 263 2.48 0.00 0 16 11 2 495.29254 989.57781 -0.09 33.48 3102 3102 MS2 13/14 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 21 100 2 590.81720 1180.62712 5.30 34.68 3882 3882 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 345 2.46 0.00 0 7 100 2 590.81799 1180.62871 6.64 31.36 2711 2711 MS2 16/18 Linfeng_20120125_PCAF_7.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 348 2.46 0.00 1 35 25 2 719.89996 1438.79265 -3.36 36.49 4393 4393 MS2 16/24 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 345 2.45 0.00 0 10 100 2 590.81689 1180.62651 4.78 34.81 3913 3913 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.45 0.00 0 14 100 2 590.81830 1180.62932 7.16 31.14 2675 2675 MS2 17/18 Linfeng_20120125_PCAF_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 223 2.45 0.00 0 15 100 2 663.38446 1325.76164 6.04 22.65 1605 1605 MS2 15/22 Linfeng_20120125_PCAF_2.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 234 2.43 0.00 0 0 25 2 663.38367 1325.76006 4.84 24.24 1738 1738 MS2 15/22 Linfeng_122411_rIgG_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 217 2.43 0.00 0 14 100 2 663.38464 1325.76201 6.31 23.78 1561 1561 MS2 15/22 Linfeng_20120125_PCAF_3.raw Medium DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 224 2.42 0.00 0 31 100 3 442.59229 1325.76230 6.53 22.67 1622 1622 MS2 16/44 Linfeng_20120125_PCAF_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 390 2.42 0.00 0 46 25 2 590.81494 1180.62261 1.47 48.10 4973 4973 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.41 0.00 0 16 100 2 590.81854 1180.62981 7.57 30.90 2630 2630 MS2 17/18 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 303 2.41 0.00 0 18 100 2 590.81891 1180.63054 8.19 2.06 202 202 MS2 16/18 Linfeng_20120125_PCAF_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 404 2.41 0.00 0 70 25 2 590.81488 1180.62248 1.37 31.10 2788 2788 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 367 2.41 0.00 0 8 100 2 590.81830 1180.62932 7.16 31.49 2736 2736 MS2 17/18 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 395 2.40 0.00 0 33 25 2 590.81500 1180.62273 1.57 24.41 1909 1909 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 353 2.40 0.00 0 10 100 2 590.81744 1180.62761 5.71 1.87 187 187 MS2 17/18 Linfeng_20120125_PCAF_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.40 0.00 0 10 100 2 590.81842 1180.62956 7.36 32.07 3004 3004 MS2 17/18 Linfeng_20120125_PCAF_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.40 0.00 0 21 100 2 590.81561 1180.62395 2.61 1.41 120 120 MS2 17/18 Linfeng_20120125_PCAF_2.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 341 2.39 0.00 0 4 25 2 655.85797 1310.70867 4.70 39.34 2958 2958 MS2 17/22 Linfeng_122411_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.39 0.00 0 19 100 2 590.81836 1180.62944 7.26 29.90 2807 2807 MS2 16/18 Linfeng_20120125_PCAF_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.39 0.00 0 27 25 2 655.85400 1310.70073 -1.36 46.40 5655 5655 MS2 18/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.39 0.00 0 37 100 2 590.81787 1180.62847 6.43 32.67 3744 3744 MS2 15/18 Linfeng_20120125_PCAF_1.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 280 2.38 0.00 0 11 2 2 495.29214 989.57701 -0.89 33.74 3190 3190 MS2 13/14 Linfeng_122411_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 309 2.38 0.00 0 24 100 2 590.81873 1180.63017 7.88 32.04 3210 3210 MS2 16/18 Linfeng_20120125_PCAF_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 340 2.38 0.00 0 4 100 2 567.77850 1134.54973 6.27 13.86 870 870 MS2 14/18 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 310 2.37 0.00 0 28 100 2 590.81873 1180.63017 7.88 30.99 2789 2789 MS2 16/18 Linfeng_20120125_PCAF_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 205 2.37 0.00 0 19 100 2 663.38434 1325.76140 5.85 31.58 3152 3152 MS2 16/22 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 274 2.37 0.00 0 1 6 2 495.29077 989.57427 -3.66 34.98 3829 3829 MS2 13/14 Linfeng_091311_rIgG_1.raw Medium ISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 218 2.36 0.00 1 17 25 3 526.63568 1577.89249 1.70 32.79 3135 3135 MS2 19/52 Linfeng_122411_rIgG_3.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 222 2.36 0.00 0 27 100 2 663.38422 1325.76116 5.67 23.72 1643 1643 MS2 14/22 Linfeng_20120125_PCAF_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 296 2.35 0.00 0 21 100 2 590.81879 1180.63030 7.98 31.93 3190 3190 MS2 16/18 Linfeng_20120125_PCAF_6.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 216 2.35 0.00 0 5 4 2 495.29651 989.58574 7.93 44.65 6173 6173 MS2 13/14 Linfeng_20120125_PCAF_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 280 2.34 0.00 0 9 25 2 567.77362 1134.53996 -2.33 17.69 1732 1732 MS2 15/18 Linfeng_091311_rIgG_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 256 2.34 0.00 0 3 25 2 495.29297 989.57866 0.78 4.54 481 481 MS2 13/14 Linfeng_122411_rIgG_7.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.33 0.00 0 57 25 2 655.85626 1310.70525 2.09 39.73 3957 3957 MS2 18/22 Linfeng_122411_rIgG_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 285 2.33 0.00 0 13 25 2 495.29108 989.57488 -3.05 35.08 4132 4132 MS2 12/14 Linfeng_091311_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 214 2.32 0.00 0 12 100 2 663.38397 1325.76067 5.30 22.74 1746 1746 MS2 15/22 Linfeng_20120125_PCAF_5.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.31 0.00 0 19 18 2 495.29297 989.57866 0.78 33.63 3385 3385 MS2 13/14 Linfeng_122411_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 379 2.31 0.00 0 55 25 2 590.81598 1180.62468 3.23 54.18 6587 6587 MS2 14/18 Linfeng_091311_rIgG_10.raw High GVLKVFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 46 2.31 0.00 1 12 25 2 693.92853 1386.84978 2.13 45.01 4578 4578 MS2 18/22 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 354 2.31 0.00 0 49 100 2 590.81842 1180.62956 7.36 30.88 2766 2766 MS2 16/18 Linfeng_20120125_PCAF_9.raw Medium DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 259 2.30 0.00 0 41 25 3 442.59070 1325.75754 2.94 24.10 2020 2020 MS2 18/44 Linfeng_122411_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 310 2.30 0.00 0 18 100 2 590.81866 1180.63005 7.78 32.00 3203 3203 MS2 17/18 Linfeng_20120125_PCAF_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 273 2.30 0.00 0 10 25 2 567.77332 1134.53935 -2.87 17.88 1784 1784 MS2 14/18 Linfeng_091311_rIgG_2.raw Medium DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 222 2.29 0.00 0 43 100 3 442.59201 1325.76148 5.91 22.76 1546 1546 MS2 19/44 Linfeng_20120125_PCAF_4.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 318 2.29 0.00 0 36 25 2 655.85706 1310.70683 3.30 39.56 3768 3768 MS2 18/22 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 354 2.29 0.00 0 20 100 2 590.81824 1180.62920 7.05 36.27 4261 4261 MS2 17/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 339 2.29 0.00 0 8 100 2 590.81818 1180.62908 6.95 32.07 2837 2837 MS2 16/18 Linfeng_20120125_PCAF_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 2.28 0.00 0 10 20 2 495.29245 989.57762 -0.27 33.90 3474 3474 MS2 13/14 Linfeng_122411_rIgG_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 2.28 0.00 0 54 25 2 567.77399 1134.54070 -1.69 17.76 1730 1730 MS2 14/18 Linfeng_091311_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 352 2.28 0.00 0 23 100 2 590.81824 1180.62920 7.05 30.91 2989 2989 MS2 17/18 Linfeng_20120125_PCAF_6.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 205 2.28 0.00 0 7 100 2 663.38470 1325.76213 6.40 22.67 1623 1623 MS2 13/22 Linfeng_20120125_PCAF_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 290 2.28 0.00 0 6 25 2 495.29114 989.57500 -2.92 34.85 4178 4178 MS2 12/14 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.28 0.00 0 43 100 2 590.81769 1180.62810 6.12 34.31 3792 3792 MS2 17/18 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 12 25 2 495.29141 989.57555 -2.37 34.98 4077 4077 MS2 12/14 Linfeng_091311_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 46 25 2 590.81311 1180.61894 -1.63 58.64 6996 6996 MS2 15/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 287 2.28 0.00 0 9 3 2 495.29208 989.57689 -1.01 33.59 3525 3525 MS2 13/14 Linfeng_122411_rIgG_5.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 238 2.28 0.00 0 25 100 2 663.38513 1325.76299 7.05 29.01 2661 2661 MS2 14/22 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 299 2.28 0.00 0 4 7 2 495.29498 989.58269 4.85 44.42 6562 6562 MS2 13/14 Linfeng_20120125_PCAF_1.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.27 0.00 0 28 25 2 567.77380 1134.54033 -2.01 19.39 2045 2045 MS2 15/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.26 0.00 0 81 25 2 590.81427 1180.62126 0.33 51.66 6317 6317 MS2 15/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 2.25 0.00 0 49 100 2 590.81812 1180.62895 6.85 33.28 3559 3559 MS2 15/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 211 2.25 0.00 0 21 100 2 663.38495 1325.76262 6.77 23.66 1577 1577 MS2 13/22 Linfeng_20120125_PCAF_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.25 0.00 0 47 25 2 590.81543 1180.62358 2.30 45.92 4695 4695 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 369 2.25 0.00 0 40 100 2 590.81793 1180.62859 6.54 30.68 2598 2598 MS2 16/18 Linfeng_20120125_PCAF_7.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 330 2.24 0.00 0 5 4 2 655.85352 1310.69975 -2.10 40.48 4904 4904 MS2 19/22 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 270 2.24 0.00 0 1 25 2 495.29123 989.57518 -2.74 35.08 4057 4057 MS2 13/14 Linfeng_091311_rIgG_9.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 277 2.24 0.00 0 5 25 2 495.29138 989.57549 -2.43 35.14 4081 4081 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 290 2.24 0.00 0 3 25 2 495.29144 989.57561 -2.31 34.85 4069 4069 MS2 13/14 Linfeng_091311_rIgG_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.23 0.00 0 49 100 2 590.81793 1180.62859 6.54 33.82 3337 3337 MS2 16/18 Linfeng_20120125_PCAF_2.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 200 2.23 0.00 0 9 100 2 663.38470 1325.76213 6.40 22.76 1470 1470 MS2 12/22 Linfeng_20120125_PCAF_3.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 328 2.23 0.00 0 6 100 2 567.77869 1134.55010 6.60 17.59 1383 1383 MS2 14/18 Linfeng_20120125_PCAF_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 226 2.22 0.00 0 29 100 2 663.38397 1325.76067 5.30 22.70 1540 1540 MS2 14/22 Linfeng_20120125_PCAF_4.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 303 2.21 0.00 0 15 98 2 495.29529 989.58330 5.47 44.39 5457 5457 MS2 12/14 Linfeng_20120125_PCAF_2.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 332 2.21 0.00 0 4 100 2 567.77856 1134.54985 6.38 13.84 1141 1141 MS2 13/18 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 282 2.20 0.00 0 4 25 2 495.29144 989.57561 -2.31 35.14 4071 4071 MS2 12/14 Linfeng_091311_rIgG_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.18 0.00 0 6 25 2 495.29092 989.57457 -3.35 34.90 4121 4121 MS2 13/14 Linfeng_091311_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 398 2.18 0.00 0 33 25 2 590.81415 1180.62102 0.13 53.12 6480 6480 MS2 15/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 351 2.18 0.00 0 9 49 2 590.81769 1180.62810 6.12 46.61 6649 6649 MS2 16/18 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 293 2.17 0.00 0 48 25 2 495.29379 989.58031 2.44 53.48 5607 5607 MS2 13/14 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 2.17 0.00 0 22 25 2 590.81525 1180.62322 1.99 42.37 4241 4241 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.16 0.00 0 12 100 2 590.81653 1180.62578 4.16 0.82 58 58 MS2 13/18 Linfeng_20120125_PCAF_2.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 323 2.16 0.00 0 5 100 2 567.77850 1134.54973 6.27 15.08 954 954 MS2 14/18 Linfeng_20120125_PCAF_1.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 213 2.16 0.00 0 20 100 2 495.29565 989.58403 6.21 44.52 5956 5956 MS2 12/14 Linfeng_20120125_PCAF_4.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 268 2.15 0.00 0 15 25 2 567.77313 1134.53899 -3.19 17.91 1796 1796 MS2 14/18 Linfeng_091311_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 208 2.15 0.00 0 15 100 2 663.38446 1325.76164 6.04 32.07 3271 3271 MS2 14/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 2.15 0.00 0 57 25 2 590.81580 1180.62432 2.92 24.56 1866 1866 MS2 14/18 Linfeng_122411_rIgG_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 218 2.14 0.00 0 49 100 2 663.38501 1325.76274 6.87 28.98 2655 2655 MS2 12/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 349 2.14 0.00 0 14 100 2 590.81824 1180.62920 7.05 32.18 3241 3241 MS2 15/18 Linfeng_20120125_PCAF_6.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 311 2.13 0.00 0 3 0 2 655.85675 1310.70622 2.83 48.59 7593 7593 MS2 19/22 Linfeng_20120125_PCAF_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.13 0.00 0 36 25 2 590.81586 1180.62444 3.02 55.26 5790 5790 MS2 15/18 Linfeng_122411_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 273 2.13 0.00 0 15 25 2 567.77441 1134.54155 -0.93 18.00 1729 1729 MS2 12/18 Linfeng_091311_rIgG_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.12 0.00 0 42 25 2 590.81158 1180.61589 -4.22 60.04 7107 7107 MS2 15/18 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 228 2.12 0.00 0 15 100 2 663.38397 1325.76067 5.30 31.83 3214 3214 MS2 14/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 352 2.12 0.00 0 54 100 2 590.81842 1180.62956 7.36 29.59 2752 2752 MS2 15/18 Linfeng_20120125_PCAF_10.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 2.12 0.00 1 7 2 2 668.86414 1336.72099 -0.75 3.70 373 373 MS2 16/20 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 240 2.11 0.00 0 13 100 2 663.38513 1325.76299 7.05 30.03 2830 2830 MS2 16/22 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.11 0.00 0 53 100 2 590.81775 1180.62822 6.23 29.60 3001 3001 MS2 15/18 Linfeng_20120125_PCAF_1.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 230 2.11 0.00 0 7 28 2 495.29550 989.58373 5.90 46.60 6647 6647 MS2 13/14 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 227 2.11 0.00 0 53 100 2 495.29614 989.58501 7.19 46.38 6592 6592 MS2 12/14 Linfeng_20120125_PCAF_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 294 2.10 0.00 0 5 25 2 567.77356 1134.53984 -2.44 20.46 2198 2198 MS2 14/18 Linfeng_091311_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 329 2.09 0.00 0 0 100 2 567.77863 1134.54997 6.49 16.59 1318 1318 MS2 12/18 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.08 0.00 0 42 100 2 590.81860 1180.62993 7.67 30.93 2777 2777 MS2 17/18 Linfeng_20120125_PCAF_9.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 222 2.07 0.00 0 17 100 2 495.29626 989.58525 7.44 47.03 6752 6752 MS2 12/14 Linfeng_20120125_PCAF_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 370 2.07 0.00 0 49 100 2 590.81793 1180.62859 6.54 31.85 2803 2803 MS2 16/18 Linfeng_20120125_PCAF_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 237 2.06 0.00 0 15 58 2 495.29602 989.58476 6.95 46.51 6623 6623 MS2 12/14 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 221 2.06 0.00 0 20 100 2 495.29568 989.58409 6.27 44.47 5633 5633 MS2 12/14 Linfeng_20120125_PCAF_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 289 2.06 0.00 0 12 72 2 495.29382 989.58037 2.50 43.00 6477 6477 MS2 11/14 Linfeng_20120125_PCAF_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 368 2.05 0.00 0 44 100 2 590.81787 1180.62847 6.43 30.75 2960 2960 MS2 17/18 Linfeng_20120125_PCAF_6.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 214 2.05 0.00 0 15 100 2 663.38434 1325.76140 5.85 22.73 1599 1599 MS2 11/22 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 334 2.05 0.00 0 65 100 2 590.81726 1180.62724 5.40 30.63 2591 2591 MS2 15/18 Linfeng_20120125_PCAF_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 2.05 0.00 0 17 25 2 590.81519 1180.62309 1.88 56.15 6780 6780 MS2 15/18 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 212 2.05 0.00 0 14 100 2 663.38422 1325.76116 5.67 31.41 3111 3111 MS2 13/22 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.05 0.00 0 50 25 2 495.29373 989.58019 2.32 44.48 4511 4511 MS2 12/14 Linfeng_122411_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 323 2.05 0.00 0 54 25 2 495.29327 989.57927 1.39 46.88 4818 4818 MS2 11/14 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 241 2.04 0.00 0 42 25 2 663.37903 1325.75078 -2.16 25.51 2814 2814 MS2 15/22 Linfeng_091311_rIgG_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 342 2.04 0.00 0 18 100 2 590.81769 1180.62810 6.12 1.29 105 105 MS2 16/18 Linfeng_20120125_PCAF_2.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 289 2.03 0.00 0 2 25 2 495.29401 989.58074 2.87 34.10 2930 2930 MS2 12/14 Linfeng_122411_rIgG_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 235 2.02 0.00 0 77 100 2 495.29568 989.58409 6.27 46.32 7017 7017 MS2 12/14 Linfeng_20120125_PCAF_1.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 220 2.01 0.00 0 53 100 2 495.29593 989.58458 6.76 45.97 6493 6493 MS2 12/14 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 213 2.01 0.00 0 12 100 2 495.29620 989.58513 7.32 47.74 6919 6919 MS2 11/14 Linfeng_20120125_PCAF_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 218 2.01 0.00 0 41 100 2 495.29578 989.58428 6.45 45.49 6818 6818 MS2 11/14 Linfeng_20120125_PCAF_1.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 296 2.00 0.00 1 28 100 2 668.86859 1336.72991 5.92 37.07 4813 4813 MS2 11/20 Linfeng_20120125_PCAF_1.raw IPI00456887.2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 16.60 2 12 12 20 31.20 15.53 11 12 26.36 8.97 7 8 0.00 747 85.1 4.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 5.02 0.00 0 3 25 2 914.42737 1827.84746 1.72 32.49 3096 3096 MS2 23/28 Linfeng_122411_rIgG_3.raw High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 3.95 0.00 0 12 25 3 609.95374 1827.84665 1.28 32.48 3095 3095 MS2 31/56 Linfeng_122411_rIgG_3.raw High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 162 3.94 0.00 0 10 25 2 914.42377 1827.84026 -2.22 33.55 3901 3901 MS2 24/28 Linfeng_091311_rIgG_3.raw High SRDLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 480 3.94 0.00 1 27 25 3 578.30634 1732.90445 1.93 27.05 2382 2382 MS2 29/56 Linfeng_122411_rIgG_3.raw High KVVVVVPNEEDWKK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 277 3.55 0.00 2 17 25 3 556.98065 1668.92740 -2.77 27.45 3088 3088 MS2 27/52 Linfeng_091311_rIgG_3.raw High DLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 3.51 0.00 0 4 25 2 745.38910 1489.77092 1.98 32.09 3043 3043 MS2 21/24 Linfeng_122411_rIgG_3.raw High VTQNLPMKEGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 358 3.35 0.00 1 17 25 3 692.36023 2075.06614 1.76 30.51 2837 2837 MS2 29/68 Linfeng_122411_rIgG_3.raw High DLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.12 0.00 0 10 25 2 745.38593 1489.76457 -2.28 33.17 3852 3852 MS2 21/24 Linfeng_091311_rIgG_3.raw High NcVVELNFGQK Unambiguous 2 1 IPI00456887.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 2.71 0.00 0 7 25 2 654.32281 1307.63835 -2.26 32.84 3811 3811 MS2 17/20 Linfeng_091311_rIgG_3.raw High SGDETPGSEVPGDK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 72 2.51 0.00 0 0 25 2 687.80389 1374.60051 -1.10 19.50 1988 1988 MS2 19/26 Linfeng_091311_rIgG_3.raw Medium SRDLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 475 2.48 0.00 1 39 25 3 578.30420 1732.89804 -1.77 28.74 3265 3265 MS2 24/56 Linfeng_091311_rIgG_3.raw Medium NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 171 2.31 0.00 0 46 25 3 609.95123 1827.83915 -2.83 33.64 3913 3913 MS2 27/56 Linfeng_091311_rIgG_3.raw High FPTLWSGAR Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 442 2.23 0.00 0 14 25 2 517.77502 1034.54277 0.90 34.84 3395 3395 MS2 15/16 Linfeng_122411_rIgG_3.raw High YGGQPLFSEK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 283 2.18 0.00 0 37 25 2 563.28381 1125.56035 2.50 24.34 2023 2023 MS2 15/18 Linfeng_122411_rIgG_3.raw High EGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.17 0.00 0 20 25 2 582.29150 1163.57573 2.73 26.46 2303 2303 MS2 14/18 Linfeng_122411_rIgG_3.raw High FPTLWSGAR Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 476 2.14 0.00 0 3 25 2 517.77307 1034.53887 -2.88 35.99 4217 4217 MS2 15/16 Linfeng_091311_rIgG_3.raw High REEDEPEER Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 50 2.13 0.00 1 26 25 2 594.75977 1188.51225 -0.46 2.70 240 240 MS2 15/16 Linfeng_091311_rIgG_3.raw High EGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 2.12 0.00 0 10 25 2 582.28888 1163.57048 -1.78 28.92 3289 3289 MS2 15/18 Linfeng_091311_rIgG_3.raw High YGGQPLFSEK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 273 2.11 0.00 0 28 25 2 563.28070 1125.55412 -3.04 27.90 3149 3149 MS2 15/18 Linfeng_091311_rIgG_3.raw High NYYGYQGYR Unambiguous 1 1 IPI00456887.2 CID 1.0000 0.0000 1 1 59 2.10 0.00 0 10 25 2 592.25854 1183.50981 -5.81 25.54 2826 2826 MS2 14/16 Linfeng_091311_rIgG_3.raw IPI00465022.9 Isoform 2 of Structural maintenance of chromosomes flexible hinge domain-containing protein 1 5.22 3 7 7 12 0.00 16.71 3.44 5 6 13.26 2.56 3 6 1917 215.6 7.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AcVcQTLGISPEEK Unambiguous 2 1 IPI00465022.9 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 209 3.17 0.00 0 22 25 2 796.37787 1591.74846 1.84 26.35 2315 2315 MS2 19/26 Linfeng_122411_rIgG_2.raw High GSNEEDTDTPLFIGK Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 177 3.15 0.00 0 4 25 2 811.88251 1622.75774 1.99 31.12 2949 2949 MS2 20/28 Linfeng_122411_rIgG_2.raw High FSFGLLDLPFR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 362 3.02 0.00 0 21 25 2 656.36047 1311.71367 3.06 49.46 5275 5275 MS2 17/20 Linfeng_122411_rIgG_2.raw High SLFEASQQLLNEMK Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 359 2.94 0.00 0 41 25 2 819.41614 1637.82500 2.80 43.63 4532 4532 MS2 19/26 Linfeng_122411_rIgG_2.raw High DSTEYFIVFEPR Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 235 2.39 0.00 0 30 25 2 751.86420 1502.72112 3.24 42.31 4367 4367 MS2 16/22 Linfeng_122411_rIgG_2.raw High TTFQENTQSISVR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 345 2.35 0.00 0 50 100 2 755.88422 1510.76116 7.61 24.77 1891 1891 MS2 16/24 Linfeng_20120125_PCAF_1.raw High TTFQENTQSISVR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 305 2.31 0.00 0 59 100 2 755.88403 1510.76079 7.37 25.22 1985 1985 MS2 15/24 Linfeng_20120125_PCAF_1.raw Medium LQVVLNESNADTYAGRPLPSK Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 334 2.25 0.00 0 15 100 3 758.07434 2272.20847 6.68 35.07 4329 4329 MS2 19/80 Linfeng_20120125_PCAF_1.raw High TTFQENTQSISVR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 337 2.15 0.00 0 53 100 2 755.88422 1510.76116 7.61 25.32 2007 2007 MS2 15/24 Linfeng_20120125_PCAF_1.raw High TTFQENTQSISVR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 327 2.14 0.00 0 66 100 2 755.88354 1510.75981 6.72 25.39 2023 2023 MS2 15/24 Linfeng_20120125_PCAF_1.raw High GSNEEDTDTPLFIGK Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 200 2.06 0.00 0 20 100 2 811.88593 1622.76457 6.21 35.55 4445 4445 MS2 17/28 Linfeng_20120125_PCAF_1.raw High FSFGLLDLPFR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 334 2.04 0.00 0 45 25 2 656.36047 1311.71367 3.06 49.40 5267 5267 MS2 15/20 Linfeng_122411_rIgG_3.raw IPI00470805.2 Isoform 2 of Mediator of DNA damage checkpoint protein 1 21.86 9 18 18 40 13.52 3.12 3 5 50.94 15.12 13 15 63.87 10.58 7 20 1825 197.5 5.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AHEVGAQGGPPVAQVEQDLPISR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 334 5.18 0.00 0 9 25 3 785.74249 2355.21292 3.25 32.50 3127 3127 MS2 39/88 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPELQPSTSTDQPVTSEPTSQVTR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 204 4.91 0.00 0 0 25 3 1126.23425 3376.68821 3.74 32.53 3131 3131 MS2 36/124 Linfeng_122411_rIgG_2.raw High TPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 253 4.82 0.00 0 2 100 3 1165.25867 3493.76145 8.01 41.88 5946 5946 MS2 42/132 Linfeng_20120125_PCAF_1.raw High ENLTDLVVDTDTLGESTQPQR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 292 4.81 0.00 0 8 25 3 777.71667 2331.13547 1.86 39.40 3999 3999 MS2 30/80 Linfeng_122411_rIgG_2.raw High TPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 248 4.53 0.00 0 3 100 3 1165.25818 3493.75998 7.59 41.84 5936 5936 MS2 43/132 Linfeng_20120125_PCAF_1.raw High TPETVVPTAPELQPSTSTDQPVTPEPTSQATR Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 261 4.25 0.00 0 4 100 3 1121.56665 3362.68540 7.57 36.15 4590 4590 MS2 26/124 Linfeng_20120125_PCAF_1.raw High AHEVGAQGGPPVAQVEQDLPISR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 335 4.19 0.00 0 26 100 3 785.74548 2355.22190 7.06 40.78 5687 5687 MS2 33/88 Linfeng_20120125_PCAF_1.raw High AHEVGAQGGPPVAQVEQDLPISR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 346 4.13 0.00 0 27 100 3 785.74475 2355.21970 6.13 40.59 5642 5642 MS2 36/88 Linfeng_20120125_PCAF_1.raw High VGLPLLSPEFLLTGVLK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 27 3.94 0.00 0 56 25 3 599.37158 1796.10019 3.85 53.98 5810 5810 MS2 28/64 Linfeng_122411_rIgG_2.raw High SQASTTVDINTQVEK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 396 3.69 0.00 0 0 25 2 810.91046 1620.81365 3.74 23.74 1976 1976 MS2 20/28 Linfeng_122411_rIgG_2.raw High GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 200 3.41 0.00 1 6 25 4 846.67621 3383.68300 3.38 28.46 2599 2599 MS2 48/198 Linfeng_122411_rIgG_2.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 201 3.39 0.00 0 3 100 3 1026.54565 3077.62241 7.21 38.96 5262 5262 MS2 26/112 Linfeng_20120125_PCAF_1.raw High TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 217 3.36 0.00 0 0 25 3 1132.91284 3396.72397 3.22 32.46 3122 3122 MS2 27/124 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 341 3.29 0.00 0 18 25 3 875.11151 2623.31998 -1.95 27.55 2829 2829 MS2 26/96 Linfeng_091311_rIgG_1.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 343 3.20 0.00 0 38 100 3 875.11847 2623.34085 6.01 28.67 2784 2784 MS2 28/96 Linfeng_20120125_PCAF_1.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 206 3.19 0.00 0 0 100 3 1026.54468 3077.61948 6.25 38.89 5245 5245 MS2 23/112 Linfeng_20120125_PCAF_1.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 206 3.07 0.00 0 1 25 3 1026.54089 3077.60813 2.57 32.32 3105 3105 MS2 27/112 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 346 3.06 0.00 0 39 100 3 875.11774 2623.33866 5.17 28.19 2669 2669 MS2 26/96 Linfeng_20120125_PCAF_1.raw High AHEVGAQGGPPVAQVEQDLPISR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 334 3.06 0.00 0 26 100 3 785.74548 2355.22190 7.06 40.51 5623 5623 MS2 34/88 Linfeng_20120125_PCAF_1.raw High TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 207 3.03 0.00 0 0 100 3 1132.91809 3396.73972 7.85 39.65 5428 5428 MS2 27/124 Linfeng_20120125_PCAF_1.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 349 3.01 0.00 0 21 25 3 875.11127 2623.31925 -2.23 27.39 3117 3117 MS2 26/96 Linfeng_091311_rIgG_2.raw High TPESIVPIAPELQPSTSR Unambiguous 7 1 IPI00470805.2 CID 1.0000 0.0000 1 1 285 2.99 0.00 0 17 25 3 641.34686 1922.02604 1.57 35.30 3481 3481 MS2 27/68 Linfeng_122411_rIgG_2.raw High TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 202 2.84 0.00 0 10 100 3 1132.91785 3396.73899 7.64 39.81 5462 5462 MS2 25/124 Linfeng_20120125_PCAF_1.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 199 2.81 0.00 0 9 100 3 1026.54712 3077.62680 8.63 38.84 5234 5234 MS2 24/112 Linfeng_20120125_PCAF_1.raw High VGLPLLSPEFLLTGVLK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 12 2.81 0.00 0 11 25 2 898.55481 1796.10234 5.04 53.86 5797 5797 MS2 17/32 Linfeng_122411_rIgG_2.raw High LDVSLPFVSR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 296 2.77 0.00 0 25 25 2 566.82324 1132.63921 2.71 39.25 3980 3980 MS2 15/18 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 339 2.76 0.00 0 23 100 3 875.11761 2623.33829 5.03 28.26 2685 2685 MS2 27/96 Linfeng_20120125_PCAF_1.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 200 2.68 0.00 0 6 100 3 1026.54602 3077.62351 7.56 39.17 5314 5314 MS2 25/112 Linfeng_20120125_PCAF_1.raw High NFGFSLQDALSR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 337 2.62 0.00 0 7 25 2 677.84210 1354.67693 1.38 39.86 4056 4056 MS2 19/22 Linfeng_122411_rIgG_2.raw High TPETLVPTAPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 301 2.56 0.00 0 43 25 2 577.32422 1153.64116 -4.52 26.92 2741 2741 MS2 14/20 Linfeng_091311_rIgG_1.raw High TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 217 2.53 0.00 0 0 100 3 1132.91614 3396.73386 6.13 39.61 5418 5418 MS2 28/124 Linfeng_20120125_PCAF_1.raw High TPESIVPIAPELQPSTSR Unambiguous 7 1 IPI00470805.2 CID 1.0000 0.0000 1 1 255 2.53 0.00 0 11 25 2 961.51703 1922.02678 1.96 35.35 3487 3487 MS2 18/34 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 8 1 IPI00470805.2 CID 1.0000 0.0000 1 1 339 2.52 0.00 0 38 100 3 875.11768 2623.33847 5.10 28.70 2790 2790 MS2 24/96 Linfeng_20120125_PCAF_1.raw High LEPSTSTDQPVTPEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 288 2.51 0.00 0 18 25 3 748.03076 2242.07773 -2.55 24.63 2435 2435 MS2 27/80 Linfeng_091311_rIgG_1.raw High VLFTGVVDAR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 329 2.50 0.00 0 22 25 2 538.80963 1076.61199 1.91 31.70 3024 3024 MS2 16/18 Linfeng_122411_rIgG_2.raw Medium TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 208 2.46 0.00 0 0 100 3 1132.91748 3396.73789 7.31 39.74 5449 5449 MS2 25/124 Linfeng_20120125_PCAF_1.raw Medium AVLALGGSLAGSAAEASHLVTDR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 305 2.35 0.00 0 6 25 3 722.72424 2166.15818 3.11 39.32 3989 3989 MS2 27/88 Linfeng_122411_rIgG_2.raw Medium TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 203 2.32 0.00 0 0 100 3 1026.54565 3077.62241 7.21 39.30 5345 5345 MS2 26/112 Linfeng_20120125_PCAF_1.raw High TPETLVPTAPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 256 2.16 0.00 0 54 25 2 577.32397 1153.64067 -4.94 26.85 3042 3042 MS2 12/20 Linfeng_091311_rIgG_2.raw High TPESIVPIAPELQPSTSR Unambiguous 7 1 IPI00470805.2 CID 1.0000 0.0000 1 1 250 2.11 0.00 0 40 100 2 961.51770 1922.02812 2.65 43.49 6334 6334 MS2 14/34 Linfeng_20120125_PCAF_1.raw IPI00477227.3 "Isoform 1 of Keratin, type II cytoskeletal 78" 21.15 2 6 10 31 28.26 5.77 3 12 27.40 10.38 5 10 20.83 15.38 7 9 520 56.8 6.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 429 3.30 0.00 0 46 25 2 721.88214 1442.75701 3.04 44.39 4787 4787 MS2 20/22 Linfeng_122411_rIgG_6.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 421 3.17 0.00 0 19 25 2 721.88239 1442.75749 3.38 44.34 4625 4625 MS2 20/22 Linfeng_122411_rIgG_2.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 419 3.07 0.00 0 46 25 2 721.87958 1442.75188 -0.51 45.38 5400 5400 MS2 20/22 Linfeng_091311_rIgG_3.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 567 2.99 0.00 0 39 25 2 508.27560 1015.54393 1.99 28.95 2663 2663 MS2 15/16 Linfeng_122411_rIgG_2.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 414 2.93 0.00 0 18 25 2 721.88196 1442.75664 2.79 44.32 4616 4616 MS2 20/22 Linfeng_122411_rIgG_3.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 398 2.82 0.00 0 38 25 2 721.88165 1442.75603 2.36 44.46 4233 4233 MS2 19/22 Linfeng_122411_rIgG_7.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 429 2.79 0.00 0 36 25 2 721.88275 1442.75823 3.88 44.25 4723 4723 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 425 2.74 0.00 0 29 25 3 481.59009 1442.75571 2.14 44.45 4795 4795 MS2 17/44 Linfeng_122411_rIgG_6.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 409 2.71 0.00 0 43 25 2 721.87897 1442.75066 -1.36 45.60 5398 5398 MS2 20/22 Linfeng_091311_rIgG_6.raw High LLcEYQELTSTK Unambiguous 2 1 IPI00477227.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 296 2.56 0.00 0 40 100 2 742.87390 1484.74053 6.98 35.32 4389 4389 MS2 16/22 Linfeng_20120125_PCAF_1.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 612 2.45 0.00 0 46 100 2 508.27740 1015.54753 5.54 30.81 3294 3294 MS2 15/16 Linfeng_20120125_PCAF_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 623 2.34 0.00 0 6 100 2 508.27759 1015.54790 5.90 31.75 3520 3520 MS2 15/16 Linfeng_20120125_PCAF_1.raw High LLcEYQELTSTK Unambiguous 2 1 IPI00477227.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 307 2.32 0.00 0 53 100 2 742.87347 1484.73967 6.40 35.69 4478 4478 MS2 16/22 Linfeng_20120125_PCAF_1.raw High SLNSFGGcLEGSR Unambiguous 1 1 IPI00477227.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.28 0.00 0 16 25 2 692.32104 1383.63481 1.88 28.09 2519 2519 MS2 18/24 Linfeng_122411_rIgG_3.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High ATLENDFVVLKK Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 268 2.17 0.00 1 31 100 2 688.89740 1376.78752 6.58 39.70 4986 4986 MS2 11/22 Linfeng_20120125_PCAF_6.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 425 2.16 0.00 0 49 25 2 721.88000 1442.75273 0.08 45.68 5400 5400 MS2 19/22 Linfeng_091311_rIgG_7.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LSLDVEIATYR Unambiguous 3 2 IPI00477227.3;IPI00376379.4 CID 1.0000 0.0000 1 1 358 2.09 0.00 0 15 100 2 640.35272 1279.69817 6.94 45.90 6918 6918 MS2 15/20 Linfeng_20120125_PCAF_1.raw High SLNSFGGcLEGSR Unambiguous 1 1 IPI00477227.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 2.08 0.00 0 53 100 2 692.32343 1383.63957 5.33 31.81 3533 3533 MS2 14/24 Linfeng_20120125_PCAF_1.raw High IEIDPQFQVVR Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 531 2.04 0.00 0 23 100 2 672.37408 1343.74089 6.74 42.18 6018 6018 MS2 15/20 Linfeng_20120125_PCAF_1.raw IPI00477971.4 Transducin beta-like protein 3 31.44 3 16 16 25 42.01 25.74 13 13 40.54 23.51 11 12 0.00 808 89.0 6.90 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SLEQEDQEDITAFDLSPDNEVLVTASR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 138 5.43 0.00 0 9 25 3 1007.80798 3021.40940 -2.60 42.21 5003 5003 MS2 40/104 Linfeng_091311_rIgG_3.raw High FLGPEDSHVVVASNSPcLK Unambiguous 3 1 IPI00477971.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 4.23 0.00 0 16 25 3 686.00897 2056.01236 -2.20 30.46 3497 3497 MS2 31/72 Linfeng_091311_rIgG_3.raw High ALLLAQWAWQEGSVTR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 407 4.11 0.00 0 35 25 3 610.32990 1828.97513 2.52 43.90 4562 4562 MS2 30/60 Linfeng_122411_rIgG_3.raw High NTAPDNGPILLQAQTTQR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 401 3.91 0.00 0 41 25 3 646.67426 1938.00821 2.17 29.03 2644 2644 MS2 26/68 Linfeng_122411_rIgG_3.raw High FLGPEDSHVVVASNSPcLK Unambiguous 3 1 IPI00477971.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 3.83 0.00 0 24 25 3 686.01117 2056.01896 1.00 29.43 2695 2695 MS2 28/72 Linfeng_122411_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 167 3.73 0.00 0 9 25 3 879.82172 2637.45060 4.51 48.21 5116 5116 MS2 30/96 Linfeng_122411_rIgG_3.raw High SLEQEDQEDITAFDLSPDNEVLVTASR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 177 3.64 0.00 0 3 25 3 1007.81342 3021.42569 2.79 41.45 4243 4243 MS2 27/104 Linfeng_122411_rIgG_3.raw High LDDHALTGASDSR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 178 3.62 0.00 0 10 25 3 453.21503 1357.63053 -2.79 21.80 2306 2306 MS2 29/48 Linfeng_091311_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 184 3.58 0.00 0 12 25 4 660.11652 2637.44423 2.10 48.27 5124 5124 MS2 32/144 Linfeng_122411_rIgG_3.raw High LLLFSSATDAAIR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 342 3.40 0.00 0 8 25 2 689.39160 1377.77593 1.61 38.10 3811 3811 MS2 22/24 Linfeng_122411_rIgG_3.raw High NTAPDNGPILLQAQTTQR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 402 3.30 0.00 0 16 25 3 646.67139 1937.99961 -2.27 30.58 3513 3513 MS2 30/68 Linfeng_091311_rIgG_3.raw High LKESFLVTGSQDcTVK Unambiguous 3 1 IPI00477971.4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 390 3.19 0.00 1 48 25 3 604.64685 1811.92600 2.84 25.30 2149 2149 MS2 27/60 Linfeng_122411_rIgG_3.raw High GTQLLSSGSDGLVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 481 3.09 0.00 0 5 25 2 681.36841 1361.72954 1.75 28.01 2508 2508 MS2 21/26 Linfeng_122411_rIgG_3.raw High DVTEAEQAEEQAR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 111 3.06 0.00 0 5 25 2 738.33246 1475.65764 -2.23 23.02 2475 2475 MS2 20/24 Linfeng_091311_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 178 3.03 0.00 0 15 25 3 879.81885 2637.44199 1.25 49.36 5899 5899 MS2 29/96 Linfeng_091311_rIgG_3.raw High VNILEVASGAVLR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 282 2.97 0.00 0 18 25 2 670.89807 1340.78887 -0.62 43.47 5160 5160 MS2 19/24 Linfeng_091311_rIgG_3.raw High LWALQDFScLK Unambiguous 3 1 IPI00477971.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 2.95 0.00 0 38 25 2 690.85138 1380.69548 -1.89 43.04 5107 5107 MS2 18/20 Linfeng_091311_rIgG_3.raw High GTQLLSSGSDGLVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 457 2.94 0.00 0 6 25 2 681.36603 1361.72478 -1.74 29.69 3393 3393 MS2 20/26 Linfeng_091311_rIgG_3.raw High VNILEVASGAVLR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 207 2.84 0.00 0 49 25 2 670.89984 1340.79241 2.02 42.42 4370 4370 MS2 20/24 Linfeng_122411_rIgG_3.raw High AALEALLPYTER Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 357 2.78 0.00 0 11 25 2 673.86938 1346.73149 -0.01 37.12 3685 3685 MS2 17/22 Linfeng_122411_rIgG_3.raw High ALLLAQWAWQEGSVTR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 406 2.73 0.00 0 27 25 3 610.32678 1828.96579 -2.59 44.91 5341 5341 MS2 29/60 Linfeng_091311_rIgG_3.raw High DINSVAIAPNDK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 321 2.67 0.00 0 21 25 2 628.82513 1256.64299 -4.12 26.71 2988 2988 MS2 17/22 Linfeng_091311_rIgG_3.raw High LPVPAAAPTPWETHK Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 477 2.59 0.00 0 26 25 3 538.95844 1614.86075 -1.97 31.36 3614 3614 MS2 23/56 Linfeng_091311_rIgG_3.raw High AALEALLPYTER Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 364 2.50 0.00 0 9 25 2 673.86798 1346.72869 -2.09 38.12 4488 4488 MS2 17/22 Linfeng_091311_rIgG_3.raw Medium LWALPQcQLLGVFSGHR Unambiguous 3 1 IPI00477971.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 367 2.44 0.00 0 40 25 3 661.35394 1982.04728 2.16 43.91 4563 4563 MS2 26/64 Linfeng_122411_rIgG_3.raw IPI00478410.2 "Isoform Liver of ATP synthase subunit gamma, mitochondrial" 12.08 1 3 3 3 7.26 12.08 3 3 298 33.0 9.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IYGLGSLALYEK Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 358 2.66 0.00 0 9 25 2 663.86774 1326.72820 -1.68 39.23 4589 4589 MS2 19/22 Linfeng_091311_rIgG_7.raw Medium THSDQFLVAFK Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 424 2.48 0.00 0 37 25 3 431.55817 1292.65995 -2.68 32.45 3725 3725 MS2 19/40 Linfeng_091311_rIgG_7.raw High ELIEIISGAAALD Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 444 2.13 0.00 0 23 25 2 657.86090 1314.71453 -0.51 47.32 5605 5605 MS2 15/24 Linfeng_091311_rIgG_7.raw IPI00550451.1 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 17.88 6 4 4 6 19.85 17.88 4 6 0.00 330 37.5 6.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EIFLSQPILLELEAPLK Unambiguous 6 1 IPI00550451.1 CID 1.0000 0.0000 1 1 95 4.89 0.00 0 57 25 2 977.07092 1953.13457 1.93 51.29 6072 6072 MS2 23/32 Linfeng_091311_rIgG_7.raw High EIFLSQPILLELEAPLK Unambiguous 6 1 IPI00550451.1 CID 1.0000 0.0000 1 1 112 4.20 0.00 0 67 25 3 651.71570 1953.13254 0.90 51.20 6071 6071 MS2 31/64 Linfeng_091311_rIgG_6.raw High TFTDcFNcLPIAAIVDEK Unambiguous 6 1 IPI00550451.1 C5(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 202 3.39 0.00 0 23 25 3 705.33649 2113.99491 0.72 47.12 5579 5579 MS2 26/68 Linfeng_091311_rIgG_7.raw High EIFLSQPILLELEAPLK Unambiguous 6 1 IPI00550451.1 CID 1.0000 0.0000 1 1 112 3.05 0.00 0 42 25 3 651.71594 1953.13327 1.27 51.21 6063 6063 MS2 29/64 Linfeng_091311_rIgG_7.raw Medium AHQVVEDGYEFFAK Unambiguous 6 1 IPI00550451.1 CID 1.0000 0.0000 1 1 199 2.27 0.00 0 33 25 3 547.26086 1639.76804 -4.34 32.90 3784 3784 MS2 24/52 Linfeng_091311_rIgG_7.raw High NVQLTENEIR Unambiguous 3 1 IPI00550451.1 CID 1.0000 0.0000 1 1 451 2.04 0.00 0 27 25 2 608.31683 1215.62639 -5.31 26.04 2856 2856 MS2 14/18 Linfeng_091311_rIgG_7.raw IPI00550731.2 Putative uncharacterized protein 35.15 5 1 5 40 73.80 28.03 4 21 32.51 19.67 3 10 24.94 20.92 3 9 239 26.2 8.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 372 4.03 0.00 0 6 25 3 599.97125 1797.89920 2.17 44.10 4505 4505 MS2 31/60 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 395 3.86 0.00 0 11 25 3 649.34839 1946.03061 1.83 40.20 4016 4016 MS2 31/68 Linfeng_122411_rIgG_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 322 3.81 0.00 0 11 100 2 938.47144 1875.93559 4.59 26.02 2255 2255 MS2 23/32 Linfeng_20120125_PCAF_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 3.67 0.00 0 12 100 2 938.47009 1875.93291 3.16 26.06 2264 2264 MS2 20/32 Linfeng_20120125_PCAF_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 12 25 3 649.34894 1946.03226 2.68 41.22 4143 4143 MS2 26/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 132 3.43 0.00 0 0 100 2 1068.49536 2135.98345 6.85 18.73 1320 1320 MS2 21/38 Linfeng_20120125_PCAF_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 375 3.36 0.00 0 16 25 3 649.34900 1946.03244 2.77 40.13 3683 3683 MS2 28/68 Linfeng_122411_rIgG_7.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 348 3.36 0.00 0 6 25 2 973.51831 1946.02934 1.18 40.22 4019 4019 MS2 24/34 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 397 3.31 0.00 0 21 25 3 649.34851 1946.03098 2.02 40.11 3838 3838 MS2 29/68 Linfeng_122411_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 218 2.90 0.00 0 38 25 2 652.31372 1303.62016 2.79 24.21 1965 1965 MS2 18/24 Linfeng_122411_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 2.88 0.00 0 18 25 2 899.45111 1797.89495 -0.19 44.33 4534 4534 MS2 17/30 Linfeng_122411_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 373 2.79 0.00 0 31 25 3 599.97186 1797.90104 3.19 44.20 4358 4358 MS2 21/60 Linfeng_122411_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 200 2.67 0.00 0 8 25 2 652.31049 1303.61370 -2.18 29.18 3420 3420 MS2 18/24 Linfeng_091311_rIgG_10.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 203 2.64 0.00 0 20 25 2 652.31012 1303.61296 -2.74 29.36 3310 3310 MS2 16/24 Linfeng_091311_rIgG_9.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 221 2.52 0.00 0 25 100 2 652.31671 1303.62615 7.38 28.59 2864 2864 MS2 18/24 Linfeng_20120125_PCAF_8.raw Medium VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.46 0.00 0 2 13 3 625.98517 1875.94095 7.45 26.43 2355 2355 MS2 31/64 Linfeng_20120125_PCAF_8.raw Medium SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.45 0.00 0 21 25 3 599.97168 1797.90049 2.89 44.48 4512 4512 MS2 20/60 Linfeng_122411_rIgG_10.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 393 2.44 0.00 0 53 25 3 649.34601 1946.02347 -1.84 42.54 5006 5006 MS2 25/68 Linfeng_091311_rIgG_9.raw Medium VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 360 2.41 0.00 0 2 100 3 625.98499 1875.94040 7.15 27.11 2514 2514 MS2 29/64 Linfeng_20120125_PCAF_8.raw Medium SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.36 0.00 0 43 25 3 599.96924 1797.89316 -1.19 45.74 5408 5408 MS2 20/60 Linfeng_091311_rIgG_7.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 227 2.30 0.00 0 28 100 2 652.31677 1303.62627 7.47 28.43 2827 2827 MS2 15/24 Linfeng_20120125_PCAF_8.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 394 2.28 0.00 0 48 25 3 649.34570 1946.02256 -2.31 43.08 5236 5236 MS2 26/68 Linfeng_091311_rIgG_10.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 219 2.18 0.00 0 34 100 2 652.31683 1303.62639 7.56 29.58 3103 3103 MS2 13/24 Linfeng_20120125_PCAF_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 341 2.17 0.00 0 82 100 2 938.47406 1875.94084 7.39 27.27 2551 2551 MS2 16/32 Linfeng_20120125_PCAF_8.raw IPI00552978.1 Cohesin subunit SA-2 10.15 2 8 8 11 13.11 6.26 4 4 26.19 8.04 6 7 1231 141.2 5.43 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLEDFLQEGEEPDEDDAYQVLSTLKR Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 195 5.42 0.00 1 9 25 3 1018.16272 3052.47361 3.32 44.52 4643 4643 MS2 34/100 Linfeng_122411_rIgG_3.raw High ELQENQDEIENMMNAIFK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 141 4.52 0.00 0 19 25 3 732.67273 2196.00364 4.00 49.45 5274 5274 MS2 35/68 Linfeng_122411_rIgG_3.raw High EPNPQGESHPPLNLAFLDILSEFSSK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 256 4.36 0.00 0 39 25 3 956.14545 2866.42179 -1.43 52.18 6326 6326 MS2 23/100 Linfeng_091311_rIgG_2.raw High ITELFAVALPQLLAK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 55 4.05 0.00 0 28 25 2 813.99829 1626.98931 3.88 47.56 5034 5034 MS2 21/28 Linfeng_122411_rIgG_3.raw High LLEDFLQEGEEPDEDDAYQVLSTLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 197 3.82 0.00 0 31 25 3 966.12689 2896.36612 1.30 48.61 5805 5805 MS2 30/96 Linfeng_091311_rIgG_3.raw High VFcQIcQHYLTNVNTTVK Unambiguous 2 1 IPI00552978.1 C3(Carbamidomethyl); C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 294 3.54 0.00 0 4 25 3 742.36774 2225.08866 1.99 30.72 2864 2864 MS2 27/68 Linfeng_122411_rIgG_3.raw High ANERLELLLQK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 222 3.23 0.00 1 30 25 3 442.93033 1326.77643 1.80 29.91 2760 2760 MS2 24/40 Linfeng_122411_rIgG_3.raw High ITELFAVALPQLLAK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 78 2.86 0.00 0 11 25 3 542.99860 1626.98124 -1.08 48.96 5921 5921 MS2 26/56 Linfeng_091311_rIgG_2.raw Medium LLEDFLQEGEEPDEDDAYQVLSTLKR Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 198 2.77 0.00 1 10 25 4 763.87421 3052.47500 3.78 44.54 4645 4645 MS2 41/150 Linfeng_122411_rIgG_3.raw High FALTFGLDQLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 262 2.66 0.00 0 13 25 2 626.85162 1252.69597 1.84 42.01 4316 4316 MS2 17/20 Linfeng_122411_rIgG_3.raw High FALTFGLDQLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 276 2.07 0.00 0 5 25 2 626.84869 1252.69011 -2.83 43.10 5179 5179 MS2 17/20 Linfeng_091311_rIgG_2.raw IPI00554648.3 "Keratin, type II cytoskeletal 8" 13.87 9 3 10 163 267.22 7.87 6 113 101.67 11.80 7 37 35.29 6.42 3 13 483 53.7 5.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 307 3.49 0.00 0 23 25 2 639.35968 1277.71208 1.61 38.39 3848 3848 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 282 3.42 0.00 0 29 25 2 639.36078 1277.71428 3.33 38.29 3974 3974 MS2 18/20 Linfeng_122411_rIgG_4.raw High LSELEAALQR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 503 3.41 0.00 0 6 25 3 377.21158 1129.62018 -0.92 30.37 3084 3084 MS2 23/36 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 308 3.35 0.00 0 14 25 2 639.36005 1277.71282 2.18 39.42 4001 4001 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 282 3.33 0.00 0 16 25 2 639.36029 1277.71330 2.56 38.30 3457 3457 MS2 18/20 Linfeng_122411_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 299 3.29 0.00 0 5 7 2 639.35858 1277.70989 -0.11 38.42 4193 4193 MS2 18/20 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 264 3.28 0.00 0 1 8 2 639.36115 1277.71501 3.90 48.57 6933 6933 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 299 3.28 0.00 0 15 17 2 639.35724 1277.70720 -2.22 39.51 4722 4722 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 306 3.28 0.00 0 29 25 2 639.35999 1277.71269 2.08 38.35 3867 3867 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 295 3.27 0.00 0 20 25 2 639.35999 1277.71269 2.08 40.55 4144 4144 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 250 3.18 0.00 0 4 1 2 639.36255 1277.71782 6.10 48.55 7142 7142 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 305 3.18 0.00 0 23 25 2 639.36115 1277.71501 3.90 47.56 5036 5036 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 306 3.13 0.00 0 9 25 2 639.36017 1277.71306 2.37 38.56 4056 4056 MS2 18/20 Linfeng_122411_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 3.10 0.00 0 8 4 2 639.35724 1277.70720 -2.22 39.64 4465 4465 MS2 18/20 Linfeng_091311_rIgG_1.raw High LEGLTDEINFLR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 372 3.06 0.00 0 11 15 2 710.37805 1419.74883 0.66 40.76 4513 4513 MS2 20/22 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 253 2.92 0.00 0 2 1 2 639.36127 1277.71526 4.09 48.56 6817 6817 MS2 18/20 Linfeng_20120125_PCAF_9.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 264 2.91 0.00 0 4 0 2 639.36035 1277.71343 2.66 48.56 7582 7582 MS2 18/20 Linfeng_20120125_PCAF_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 269 2.89 0.00 0 2 1 2 639.36029 1277.71330 2.56 48.57 6448 6448 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 263 2.88 0.00 0 6 27 2 639.36163 1277.71599 4.66 55.12 8144 8144 MS2 18/20 Linfeng_20120125_PCAF_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 275 2.88 0.00 0 16 25 2 639.36072 1277.71416 3.23 44.12 4597 4597 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 281 2.86 0.00 0 44 25 2 639.36108 1277.71489 3.80 55.44 5969 5969 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 302 2.84 0.00 0 19 25 2 639.35883 1277.71037 0.27 57.35 6547 6547 MS2 18/20 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 297 2.80 0.00 0 7 25 2 639.35742 1277.70757 -1.93 39.55 4662 4662 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 276 2.79 0.00 0 14 25 2 639.36023 1277.71318 2.47 41.60 4276 4276 MS2 18/20 Linfeng_122411_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 267 2.76 0.00 0 19 25 2 639.35938 1277.71147 1.13 57.08 6542 6542 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 286 2.75 0.00 0 51 25 2 639.36121 1277.71514 3.99 54.35 5853 5853 MS2 17/20 Linfeng_122411_rIgG_2.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 351 2.75 0.00 0 7 25 2 569.29388 1137.58049 1.60 22.57 2029 2029 MS2 16/18 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 253 2.74 0.00 0 53 25 2 639.36023 1277.71318 2.47 48.60 5166 5166 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 267 2.72 0.00 0 15 25 2 639.35748 1277.70769 -1.83 57.90 6603 6603 MS2 17/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 248 2.71 0.00 0 24 25 2 639.36096 1277.71465 3.61 52.60 5658 5658 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 332 2.69 0.00 0 21 25 2 639.35999 1277.71269 2.08 38.68 3768 3768 MS2 18/20 Linfeng_122411_rIgG_10.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.69 0.00 0 15 25 2 639.35748 1277.70769 -1.83 40.82 4627 4627 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 322 2.68 0.00 0 11 25 2 639.35724 1277.70720 -2.22 41.68 4931 4931 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 336 2.67 0.00 0 10 25 2 639.35712 1277.70696 -2.41 39.72 4662 4662 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 247 2.66 0.00 0 10 25 2 639.36072 1277.71416 3.23 54.23 6415 6415 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 299 2.65 0.00 0 47 25 2 639.36005 1277.71282 2.18 51.42 5981 5981 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 316 2.65 0.00 0 9 25 2 639.35718 1277.70708 -2.31 39.73 4653 4653 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 2.64 0.00 0 12 25 2 639.35724 1277.70720 -2.22 40.53 4853 4853 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 256 2.64 0.00 0 0 3 2 639.36066 1277.71404 3.13 48.56 6651 6651 MS2 18/20 Linfeng_20120125_PCAF_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 355 2.63 0.00 0 17 25 2 639.35803 1277.70879 -0.97 58.46 6793 6793 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 285 2.63 0.00 0 22 25 2 639.35754 1277.70781 -1.74 46.15 5566 5566 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 360 2.62 0.00 0 26 25 2 639.35785 1277.70842 -1.26 47.00 5572 5572 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.61 0.00 0 24 25 2 639.36078 1277.71428 3.33 49.59 5292 5292 MS2 15/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 298 2.61 0.00 0 6 25 2 639.35681 1277.70635 -2.88 40.79 4786 4786 MS2 18/20 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.60 0.00 0 17 25 2 639.35687 1277.70647 -2.79 43.85 5205 5205 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 278 2.59 0.00 0 9 25 2 639.35864 1277.71001 -0.02 56.85 6692 6692 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 298 2.59 0.00 0 12 25 2 639.35742 1277.70757 -1.93 39.43 4653 4653 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 320 2.58 0.00 0 14 25 2 639.35693 1277.70659 -2.69 43.98 5290 5290 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 257 2.58 0.00 0 27 25 2 639.36108 1277.71489 3.80 38.32 2863 2863 MS2 17/20 Linfeng_122411_rIgG_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.57 0.00 0 20 25 2 639.35675 1277.70622 -2.98 39.80 4662 4662 MS2 18/20 Linfeng_091311_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.57 0.00 2 15 100 3 436.89230 1308.66236 6.16 17.30 1300 1300 MS2 19/36 Linfeng_20120125_PCAF_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 315 2.57 0.00 0 0 25 2 639.35718 1277.70708 -2.31 41.60 4989 4989 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 310 2.57 0.00 0 2 3 2 639.36121 1277.71514 3.99 48.58 6633 6633 MS2 15/20 Linfeng_20120125_PCAF_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 285 2.57 0.00 0 21 25 2 639.36041 1277.71355 2.75 51.59 5541 5541 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 337 2.54 0.00 0 6 25 2 639.35815 1277.70903 -0.78 45.93 5466 5466 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.54 0.00 0 11 25 2 639.35730 1277.70732 -2.12 39.69 4805 4805 MS2 18/20 Linfeng_091311_rIgG_10.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 2.54 0.00 0 3 25 2 639.35712 1277.70696 -2.41 40.59 4794 4794 MS2 18/20 Linfeng_091311_rIgG_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 320 2.52 0.00 0 0 25 2 639.35840 1277.70952 -0.40 47.96 5722 5722 MS2 18/20 Linfeng_091311_rIgG_4.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.52 0.00 2 15 100 3 436.89246 1308.66281 6.51 14.25 898 898 MS2 15/36 Linfeng_20120125_PCAF_1.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 284 2.52 0.00 0 21 25 2 639.35828 1277.70928 -0.59 47.07 5611 5611 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 289 2.51 0.00 0 20 25 2 639.35724 1277.70720 -2.22 40.76 4793 4793 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 405 2.50 0.00 0 18 25 2 639.35785 1277.70842 -1.26 49.38 5973 5973 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 321 2.48 0.00 0 2 25 2 639.35706 1277.70683 -2.50 42.71 5061 5061 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 330 2.46 0.00 0 20 25 2 639.35992 1277.71257 1.99 54.68 6585 6585 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 328 2.45 0.00 0 33 25 2 639.35712 1277.70696 -2.41 41.51 4915 4915 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.45 0.00 0 25 25 2 639.35742 1277.70757 -1.93 41.96 4933 4933 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 293 2.44 0.00 0 12 25 2 639.35651 1277.70574 -3.36 39.73 4633 4633 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 322 2.43 0.00 0 11 25 2 639.35876 1277.71025 0.17 50.14 5998 5998 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 298 2.43 0.00 0 21 25 2 639.35675 1277.70622 -2.98 45.08 5429 5429 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 294 2.43 0.00 0 12 25 2 639.35815 1277.70903 -0.78 57.73 6858 6858 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 2.42 0.00 0 12 25 2 639.35889 1277.71050 0.36 57.87 6780 6780 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 334 2.42 0.00 0 0 25 2 639.35870 1277.71013 0.08 52.20 6228 6228 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 252 2.42 0.00 0 13 25 2 639.35742 1277.70757 -1.93 58.91 6875 6875 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 276 2.42 0.00 0 23 25 2 639.35724 1277.70720 -2.22 58.75 6942 6942 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 268 2.41 0.00 0 4 21 2 639.36115 1277.71501 3.90 55.14 7549 7549 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 318 2.41 0.00 0 15 25 2 639.35632 1277.70537 -3.65 42.99 5166 5166 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 285 2.41 0.00 0 20 25 2 639.35779 1277.70830 -1.36 48.39 5850 5850 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 307 2.40 0.00 0 19 25 2 639.35767 1277.70806 -1.55 50.47 6111 6111 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 275 2.40 0.00 0 17 25 2 639.36017 1277.71306 2.37 46.17 4859 4859 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 287 2.39 0.00 0 15 25 2 639.35754 1277.70781 -1.74 46.95 5593 5593 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 272 2.39 0.00 0 25 25 2 639.35858 1277.70989 -0.11 55.69 6680 6680 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 297 2.38 0.00 0 27 25 2 639.35687 1277.70647 -2.79 40.79 4787 4787 MS2 18/20 Linfeng_091311_rIgG_9.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 328 2.38 0.00 0 49 25 2 639.36115 1277.71501 3.90 42.71 4418 4418 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 310 2.38 0.00 0 29 25 2 639.35852 1277.70976 -0.21 52.38 6257 6257 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 304 2.37 0.00 0 27 25 2 639.35663 1277.70598 -3.17 39.76 4747 4747 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 320 2.37 0.00 0 21 25 2 639.35687 1277.70647 -2.79 40.82 4884 4884 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 261 2.37 0.00 0 19 25 2 639.35907 1277.71086 0.65 54.41 6456 6456 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 312 2.36 0.00 0 43 25 2 639.35870 1277.71013 0.08 56.85 6536 6536 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 303 2.36 0.00 0 30 25 2 639.35736 1277.70745 -2.02 40.48 4785 4785 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 288 2.36 0.00 0 12 25 2 639.36047 1277.71367 2.85 45.12 4725 4725 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 333 2.34 0.00 0 12 25 2 639.35901 1277.71074 0.56 53.47 6470 6470 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 2.34 0.00 0 14 25 2 639.35815 1277.70903 -0.78 44.89 5334 5334 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 264 2.33 0.00 0 6 51 2 639.36139 1277.71550 4.28 48.67 7138 7138 MS2 17/20 Linfeng_20120125_PCAF_10.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 259 2.32 0.00 0 41 25 2 639.35974 1277.71221 1.70 52.81 6214 6214 MS2 16/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 311 2.32 0.00 0 32 25 2 639.35919 1277.71111 0.84 51.45 6234 6234 MS2 18/20 Linfeng_091311_rIgG_2.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 366 2.31 0.00 2 5 8 3 436.88864 1308.65137 -2.24 18.37 1829 1829 MS2 21/36 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 363 2.31 0.00 2 4 3 3 436.88809 1308.64972 -3.50 18.40 1859 1859 MS2 21/36 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 280 2.30 0.00 0 12 25 2 639.35773 1277.70818 -1.45 49.00 5854 5854 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 368 2.29 0.00 0 39 25 2 639.35791 1277.70854 -1.16 46.09 5489 5489 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 256 2.28 0.00 0 20 25 2 639.35767 1277.70806 -1.55 51.78 6128 6128 MS2 17/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 361 2.27 0.00 2 6 17 3 436.88849 1308.65091 -2.59 18.41 1822 1822 MS2 21/36 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 293 2.27 0.00 0 30 25 2 639.35992 1277.71257 1.99 53.85 6301 6301 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 369 2.27 0.00 0 16 25 2 639.35797 1277.70867 -1.07 58.32 6740 6740 MS2 18/20 Linfeng_091311_rIgG_3.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 386 2.26 0.00 0 32 25 2 569.29132 1137.57536 -2.91 28.22 3124 3124 MS2 15/18 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 286 2.26 0.00 0 74 25 2 639.35742 1277.70757 -1.93 54.71 6487 6487 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 293 2.25 0.00 0 25 25 2 639.35925 1277.71123 0.94 57.30 6896 6896 MS2 16/20 Linfeng_091311_rIgG_8.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.25 0.00 2 5 16 3 436.88831 1308.65036 -3.01 18.60 1866 1866 MS2 21/36 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 279 2.25 0.00 0 16 25 2 639.35895 1277.71062 0.46 52.47 6357 6357 MS2 18/20 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 275 2.24 0.00 0 0 25 2 639.35962 1277.71196 1.51 56.70 6776 6776 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 302 2.24 0.00 0 23 25 2 639.35834 1277.70940 -0.50 44.99 5351 5351 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 356 2.24 0.00 0 49 25 2 639.35797 1277.70867 -1.07 47.18 5697 5697 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 301 2.23 0.00 0 23 25 2 639.35815 1277.70903 -0.78 50.01 5982 5982 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.23 0.00 0 22 25 2 639.35846 1277.70964 -0.30 57.44 6712 6712 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.22 0.00 0 9 25 2 639.35962 1277.71196 1.51 57.32 6664 6664 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 262 2.22 0.00 0 0 25 2 639.35907 1277.71086 0.65 56.30 6588 6588 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 291 2.22 0.00 0 34 25 2 639.35944 1277.71160 1.22 52.58 6256 6256 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 277 2.21 0.00 0 31 25 2 639.36035 1277.71343 2.66 56.18 6442 6442 MS2 17/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 304 2.21 0.00 0 24 25 2 639.35840 1277.70952 -0.40 51.13 6113 6113 MS2 16/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LSELEAALQR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 625 2.18 0.00 0 42 100 2 565.31787 1129.62847 6.41 35.75 4645 4645 MS2 15/18 Linfeng_20120125_PCAF_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.18 0.00 0 10 25 2 639.36121 1277.71514 3.99 52.03 6131 6131 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.18 0.00 0 20 25 2 639.35944 1277.71160 1.22 56.43 6637 6637 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 319 2.17 0.00 0 29 25 2 639.35858 1277.70989 -0.11 51.12 6119 6119 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 290 2.17 0.00 0 20 25 2 639.35767 1277.70806 -1.55 57.91 6613 6613 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 306 2.17 0.00 0 10 25 2 639.35754 1277.70781 -1.74 45.33 5363 5363 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.16 0.00 0 47 25 2 569.29425 1137.58122 2.24 21.54 1902 1902 MS2 16/18 Linfeng_122411_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 296 2.15 0.00 0 49 25 2 639.35779 1277.70830 -1.36 48.47 5758 5758 MS2 15/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 288 2.12 0.00 0 14 25 2 639.35980 1277.71233 1.80 53.20 6322 6322 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 272 2.12 0.00 0 40 25 2 639.35919 1277.71111 0.84 55.41 6551 6551 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 300 2.12 0.00 0 7 25 2 639.35687 1277.70647 -2.79 42.02 4951 4951 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 293 2.11 0.00 0 28 25 2 639.35883 1277.71037 0.27 50.99 6039 6039 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 267 2.10 0.00 0 46 25 2 639.35687 1277.70647 -2.79 58.93 6679 6679 MS2 15/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 284 2.10 0.00 0 79 25 2 639.35693 1277.70659 -2.69 49.98 5932 5932 MS2 14/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 297 2.10 0.00 0 19 25 2 639.35889 1277.71050 0.36 48.09 5740 5740 MS2 16/20 Linfeng_091311_rIgG_3.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 299 2.09 0.00 0 47 25 2 639.35938 1277.71147 1.13 56.89 6527 6527 MS2 15/20 Linfeng_091311_rIgG_7.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 270 2.07 0.00 0 9 25 2 639.35895 1277.71062 0.46 53.39 6361 6361 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 316 2.06 0.00 0 77 25 2 639.36060 1277.71391 3.04 56.29 6795 6795 MS2 17/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 295 2.06 0.00 0 49 25 2 639.35779 1277.70830 -1.36 43.56 5135 5135 MS2 17/20 Linfeng_091311_rIgG_7.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 328 2.04 0.00 0 32 25 2 639.36115 1277.71501 3.90 49.09 5866 5866 MS2 16/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 8 2 IPI00554648.3;IPI00220327.4 CID 1.0000 0.0000 1 2 290 2.03 0.00 0 0 25 2 639.35925 1277.71123 0.94 53.58 6373 6373 MS2 16/20 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00554711.3 Junction plakoglobin 8.99 1 2 4 5 0.00 14.83 8.99 4 5 745 81.7 6.14 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAIVHLINYQDDAELATR Unambiguous 2 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 413 4.05 0.00 0 9 25 3 677.01782 2029.03891 1.94 33.28 3225 3225 MS2 29/68 Linfeng_122411_rIgG_2.raw High NLSDVATKQEGLESVLK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 358 3.24 0.00 1 22 25 3 611.00031 1830.98636 3.03 32.35 2863 2863 MS2 27/64 Linfeng_122411_rIgG_9.raw High LNTIPLFVQLLYSSVENIQR Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 125 3.04 0.00 0 21 25 3 783.10822 2347.31009 3.41 55.61 6414 6414 MS2 26/76 Linfeng_122411_rIgG_5.raw Medium NLSDVATKQEGLESVLK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 357 2.40 0.00 1 42 25 3 610.99988 1830.98508 2.33 32.47 3123 3123 MS2 25/64 Linfeng_122411_rIgG_2.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 397 2.10 0.00 0 40 25 2 671.36755 1341.72783 1.30 28.07 2718 2718 MS2 14/22 Linfeng_122411_rIgG_6.raw IPI00556218.1 Isoform 4 of Nucleolar protein 6 7.00 3 5 5 5 13.37 7.00 5 5 0.00 0.00 1143 127.2 7.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GQSPAGDGSPEPPTPR Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 196 3.19 0.00 0 6 25 2 775.36407 1549.72087 -2.15 20.88 2207 2207 MS2 20/30 Linfeng_091311_rIgG_2.raw High TVFRPPLDIYDVLIR Unambiguous 2 1 IPI00556218.1 CID 1.0000 0.0000 1 1 172 3.01 0.00 0 5 25 3 606.34760 1817.02823 -2.11 45.15 5439 5439 MS2 37/56 Linfeng_091311_rIgG_2.raw High ETSSTGEEALVAAVR Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 381 2.47 0.00 0 4 25 2 760.38147 1519.75566 -2.80 31.37 3656 3656 MS2 20/28 Linfeng_091311_rIgG_2.raw Medium LLWGLEGLPLTVSAVQGAHPVLR Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 74 2.38 0.00 0 30 25 3 809.46759 2426.38822 -1.54 46.58 5620 5620 MS2 26/88 Linfeng_091311_rIgG_2.raw High FLFLVSTFDWK Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 448 2.32 0.00 0 33 25 2 701.87360 1402.73992 -0.50 50.07 6061 6061 MS2 16/20 Linfeng_091311_rIgG_2.raw IPI00607550.3 U3 small nucleolar RNA-associated protein 14 homolog A isoform 2 17.25 4 8 8 11 20.13 11.54 6 6 15.41 11.54 5 5 0.00 719 82.0 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SELSQDAEPAGSQETK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 121 4.62 0.00 0 7 25 2 838.88324 1676.75920 -1.10 20.11 2074 2074 MS2 24/30 Linfeng_091311_rIgG_3.raw High VSEFNVSSEGSGEK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 116 3.75 0.00 0 21 25 2 728.33197 1455.65666 -2.20 23.85 2591 2591 MS2 23/26 Linfeng_091311_rIgG_3.raw High TPLEQEIFNLLHK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 331 3.72 0.00 0 32 25 3 527.96051 1581.86698 2.15 44.41 4628 4628 MS2 31/48 Linfeng_122411_rIgG_3.raw High NKQPVTDPLLTPVEK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 229 3.37 0.00 1 39 25 3 560.31848 1678.94089 2.02 25.79 2214 2214 MS2 27/56 Linfeng_122411_rIgG_3.raw High NKQPVTDPLLTPVEK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 275 3.24 0.00 1 26 25 3 560.31598 1678.93338 -2.45 28.58 3243 3243 MS2 28/56 Linfeng_091311_rIgG_3.raw High TIQTPIGSTWNTQR Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 412 3.01 0.00 0 34 25 2 801.91425 1602.82121 -1.43 31.42 3622 3622 MS2 20/26 Linfeng_091311_rIgG_3.raw Medium ASSEGTIPQVQREEPAPEEEEPLLLQRPER Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 233 2.96 0.00 1 5 25 4 854.43567 3414.72085 2.08 31.20 2928 2928 MS2 37/174 Linfeng_122411_rIgG_3.raw High TPLEQEIFNLLHK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 358 2.80 0.00 0 28 25 3 527.95880 1581.86185 -1.09 45.09 5363 5363 MS2 23/48 Linfeng_091311_rIgG_3.raw High TIQTPIGSTWNTQR Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 417 2.74 0.00 0 23 25 2 801.91766 1602.82805 2.84 30.13 2789 2789 MS2 19/26 Linfeng_122411_rIgG_3.raw High LVLADLLEPVK Unambiguous 3 1 IPI00607550.3 CID 1.0000 0.0000 1 1 57 2.72 0.00 0 24 25 2 605.37543 1209.74358 -1.48 44.27 5260 5260 MS2 17/20 Linfeng_091311_rIgG_3.raw High LLEAISSLDGK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 463 2.63 0.00 0 15 25 2 573.32562 1145.64397 2.34 32.70 3123 3123 MS2 18/20 Linfeng_122411_rIgG_3.raw IPI00641229.4 Ig alpha-2 chain C region 21.76 10 1 4 5 13.04 21.76 4 5 340 36.5 6.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QEPSQGTTTFAVTSILR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 414 3.28 0.00 0 21 25 3 612.65283 1835.94394 -3.21 38.10 4602 4602 MS2 25/64 Linfeng_091311_rIgG_10.raw Medium SGNTFRPEVHLLPPPSEELALNELVTLTcLAR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 C29(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 2.65 0.00 0 39 25 4 894.22443 3573.87588 0.65 50.00 6110 6110 MS2 40/186 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 304 2.50 0.00 0 17 25 2 607.31860 1213.62993 -2.08 29.17 3419 3419 MS2 18/18 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 301 2.49 0.00 0 5 25 2 607.31842 1213.62956 -2.38 29.37 3312 3312 MS2 17/18 Linfeng_091311_rIgG_9.raw High DASGATFTWTPSSGK Unambiguous 10 1 IPI00641229.4 CID 1.0000 0.0000 1 1 150 2.12 0.00 0 15 25 2 756.84961 1512.69194 -3.07 32.68 3894 3894 MS2 16/28 Linfeng_091311_rIgG_10.raw IPI00642046.1 RSL1D1 protein 25.15 2 12 12 13 35.45 25.15 12 13 489 54.8 10.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAALPIFSSFVSNWDEATK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 285 5.15 0.00 0 18 25 2 1035.51306 2070.01885 0.44 50.72 6072 6072 MS2 28/36 Linfeng_091311_rIgG_4.raw High SAALPIFSSFVSNWDEATK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 356 3.04 0.00 0 49 25 3 690.67706 2070.01664 -0.63 50.47 6041 6041 MS2 23/72 Linfeng_091311_rIgG_4.raw High SDSEDIcLFTK Unambiguous 2 1 IPI00642046.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 2.71 0.00 0 26 25 2 657.79590 1314.58452 -2.85 33.00 3823 3823 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLSSFDFFLTDAR Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 436 2.68 0.00 0 43 25 2 766.39166 1531.77605 -2.05 47.32 5643 5643 MS2 21/24 Linfeng_091311_rIgG_4.raw High KAVDALLTHcK Unambiguous 2 1 IPI00642046.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 390 2.68 0.00 1 32 25 3 419.23172 1255.68061 -1.73 21.45 2250 2250 MS2 29/40 Linfeng_091311_rIgG_4.raw High EINDcIGGTVLNISK Unambiguous 2 1 IPI00642046.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 382 2.62 0.00 0 21 25 2 816.91302 1632.81877 -4.56 35.08 4090 4090 MS2 20/28 Linfeng_091311_rIgG_4.raw High TASVLSKDDVAPESGDTTVK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 369 2.55 0.00 1 5 25 3 674.00592 2020.00321 -2.46 24.61 2691 2691 MS2 22/76 Linfeng_091311_rIgG_4.raw High TVSQIISLQTLK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 131 2.54 0.00 0 17 25 2 665.89935 1330.79143 -2.00 36.11 4224 4224 MS2 19/22 Linfeng_091311_rIgG_4.raw High KKVPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 41 2.54 0.00 2 21 25 3 437.94891 1311.83219 -2.84 24.38 2660 2660 MS2 27/44 Linfeng_091311_rIgG_4.raw Medium KVPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 119 2.49 0.00 1 22 25 3 395.25073 1183.73764 -2.79 28.72 3255 3255 MS2 22/40 Linfeng_091311_rIgG_4.raw High KALPASETPK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 201 2.19 0.00 1 15 25 2 521.30017 1041.59307 -0.84 14.38 1252 1252 MS2 12/18 Linfeng_091311_rIgG_4.raw High DDVAPESGDTTVK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 121 2.16 0.00 0 26 25 2 667.30847 1333.60967 -1.64 19.73 2009 2009 MS2 18/24 Linfeng_091311_rIgG_4.raw High VPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 117 2.09 0.00 0 18 25 2 528.32562 1055.64397 -1.90 32.06 3698 3698 MS2 13/18 Linfeng_091311_rIgG_4.raw IPI00642510.3 testis-expressed sequence 10 protein isoform 2 5.15 2 3 3 3 10.59 5.15 3 3 0.00 913 103.8 9.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NPELSTQLIDIIHTAAAR Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 314 3.75 0.00 0 18 25 3 655.02448 1963.05887 -0.98 43.86 5209 5209 MS2 31/68 Linfeng_091311_rIgG_3.raw High VLDILLEQYPALITGR Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 148 3.63 0.00 0 24 25 3 605.35181 1814.04087 -0.79 47.00 5602 5602 MS2 33/60 Linfeng_091311_rIgG_3.raw High LAAVQLLQFLAPK Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 84 3.20 0.00 0 14 25 2 706.43695 1411.86662 -0.42 49.63 5934 5934 MS2 17/24 Linfeng_091311_rIgG_3.raw IPI00644055.3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein R 38.52 3 1 23 69 86.70 31.76 18 32 66.68 27.20 15 22 40.41 12.74 7 15 636 71.2 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 333 4.48 0.00 1 0 25 3 879.11920 2635.34305 1.02 33.88 3418 3418 MS2 42/100 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 321 4.43 0.00 1 5 21 3 879.11639 2635.33463 -2.18 34.89 4066 4066 MS2 38/100 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 477 4.41 0.00 0 2 25 3 487.59863 1460.78135 -2.04 42.64 5052 5052 MS2 30/48 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 487 4.21 0.00 0 3 25 3 487.60062 1460.78730 2.03 41.48 4373 4373 MS2 28/48 Linfeng_122411_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 434 3.92 0.00 0 5 25 2 730.89764 1460.78801 2.52 41.60 4434 4434 MS2 21/24 Linfeng_122411_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 442 3.88 0.00 0 3 19 2 730.89813 1460.78899 3.19 41.38 4360 4360 MS2 21/24 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 3.70 0.00 0 16 100 3 836.42529 2507.26133 6.36 45.58 6212 6212 MS2 34/96 Linfeng_20120125_PCAF_4.raw High AIDALREFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 320 3.62 0.00 1 13 25 3 793.41888 2378.24210 2.91 45.13 4835 4835 MS2 28/80 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 330 3.60 0.00 0 18 100 3 836.42572 2507.26261 6.87 45.44 6178 6178 MS2 33/96 Linfeng_20120125_PCAF_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 262 3.52 0.00 0 6 25 2 805.40656 1609.80583 3.84 45.06 4873 4873 MS2 20/24 Linfeng_122411_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 298 3.51 0.00 0 21 25 3 836.42126 2507.24924 1.54 37.04 3817 3817 MS2 34/96 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 325 3.48 0.00 0 7 100 3 836.42548 2507.26187 6.57 45.83 6273 6273 MS2 33/96 Linfeng_20120125_PCAF_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 344 3.40 0.00 0 32 25 2 869.93854 1738.86980 2.92 43.10 4576 4576 MS2 20/28 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 350 3.34 0.00 0 18 25 3 580.29474 1738.86966 2.84 43.06 4572 4572 MS2 31/56 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 316 3.17 0.00 0 23 100 3 836.42517 2507.26096 6.21 45.86 5969 5969 MS2 26/96 Linfeng_20120125_PCAF_3.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 482 3.16 0.00 0 6 25 2 730.89484 1460.78240 -1.32 42.76 5043 5043 MS2 21/24 Linfeng_091311_rIgG_6.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 229 3.15 0.00 0 21 25 2 805.40265 1609.79802 -1.01 46.11 5462 5462 MS2 20/24 Linfeng_091311_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 432 3.11 0.00 0 11 25 2 730.89441 1460.78154 -1.91 42.52 5036 5036 MS2 21/24 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 260 3.10 0.00 0 3 25 2 805.40582 1609.80437 2.93 44.81 4794 4794 MS2 20/24 Linfeng_122411_rIgG_4.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 349 3.07 0.00 1 16 25 3 513.92316 1539.75492 -2.72 30.41 3483 3483 MS2 26/44 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 3.02 0.00 0 6 21 2 582.28241 1163.55754 1.81 35.39 3607 3607 MS2 15/18 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 3.00 0.00 0 32 25 2 869.93451 1738.86174 -1.71 44.33 5264 5264 MS2 19/28 Linfeng_091311_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 2.94 0.00 0 25 100 3 836.42560 2507.26224 6.72 45.72 5935 5935 MS2 29/96 Linfeng_20120125_PCAF_3.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 23 25 2 535.31720 1069.62712 1.76 26.39 2438 2438 MS2 16/18 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 13 15 2 805.40234 1609.79741 -1.39 46.04 5479 5479 MS2 20/24 Linfeng_091311_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 334 2.91 0.00 0 19 25 3 580.29218 1738.86197 -1.58 44.35 5266 5266 MS2 32/56 Linfeng_091311_rIgG_4.raw High VTGLTEGLVDVILYHQPDDK Unambiguous 2 1 IPI00644055.3 CID 1.0000 0.0000 1 1 393 2.89 0.00 0 8 25 3 738.05359 2212.14621 -1.57 45.10 5361 5361 MS2 28/76 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 88 2.78 0.00 0 8 100 2 879.89703 1758.78679 6.23 29.02 2309 2309 MS2 15/26 Linfeng_20120125_PCAF_3.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.75 0.00 1 9 14 4 385.69418 1539.75490 -2.73 30.39 3481 3481 MS2 29/66 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 431 2.71 0.00 1 8 25 3 430.21945 1288.64380 4.50 2.91 277 277 MS2 23/44 Linfeng_122411_rIgG_4.raw High ESDLSHVQNK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.70 0.00 0 21 25 2 578.78235 1156.55742 -1.65 14.89 1324 1324 MS2 13/18 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 456 2.68 0.00 0 10 25 2 730.89496 1460.78264 -1.16 42.56 5046 5046 MS2 19/24 Linfeng_091311_rIgG_3.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.68 0.00 0 6 24 2 582.28015 1163.55303 -2.07 36.47 4271 4271 MS2 15/18 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 313 2.65 0.00 0 11 25 3 580.29211 1738.86179 -1.69 44.44 5252 5252 MS2 25/56 Linfeng_091311_rIgG_6.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 220 2.60 0.00 1 32 25 3 408.19482 1222.56992 0.01 11.94 976 976 MS2 19/40 Linfeng_091311_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 2.59 0.00 0 33 25 3 836.41833 2507.24045 -1.97 38.14 4484 4484 MS2 27/96 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 309 2.57 0.00 0 7 25 3 537.27313 1609.80484 3.23 44.89 4805 4805 MS2 32/48 Linfeng_122411_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 422 2.56 0.00 1 7 25 3 446.56873 1337.69162 -2.36 31.81 3665 3665 MS2 22/40 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TGYTLDVTTGQR Unambiguous 12 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 250 2.43 0.00 0 48 25 2 805.40332 1609.79936 -0.18 45.94 5470 5470 MS2 18/24 Linfeng_091311_rIgG_3.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 327 2.41 0.00 1 36 100 2 770.38861 1539.76995 7.04 42.60 5490 5490 MS2 16/22 Linfeng_20120125_PCAF_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.40 0.00 0 11 25 2 805.40601 1609.80474 3.16 44.94 4697 4697 MS2 16/24 Linfeng_122411_rIgG_3.raw High GFcFLEYEDHK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.39 0.00 0 30 100 2 722.81793 1444.62859 5.79 44.07 5848 5848 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 481 2.39 0.00 1 16 25 3 446.57065 1337.69739 1.95 30.41 2969 2969 MS2 21/40 Linfeng_122411_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 106 2.39 0.00 0 10 100 2 879.89746 1758.78765 6.71 28.67 2413 2413 MS2 15/26 Linfeng_20120125_PCAF_4.raw Medium HLGVcISVANNR Unambiguous 13 4 IPI00402182.2;IPI00402184.4;IPI00012074.3;IPI00644055.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 2 356 2.38 0.00 0 30 9 3 447.23425 1339.68821 -1.33 4.18 475 475 MS2 23/44 Linfeng_122411_rIgG_4.raw High ADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 68 2.38 0.00 0 16 25 2 547.74078 1094.47429 -0.59 13.98 1197 1197 MS2 14/18 Linfeng_091311_rIgG_4.raw High DYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 119 2.36 0.00 0 14 100 2 649.79834 1298.58940 7.19 40.49 4996 4996 MS2 13/18 Linfeng_20120125_PCAF_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 162 2.36 0.00 0 35 25 2 535.31470 1069.62212 -2.92 28.59 3238 3238 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 175 2.35 0.00 0 36 25 2 535.31482 1069.62236 -2.69 28.83 3258 3258 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 324 2.34 0.00 1 23 100 3 513.92853 1539.77103 7.74 42.33 5110 5110 MS2 21/44 Linfeng_20120125_PCAF_3.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 420 2.33 0.00 1 9 100 2 669.35663 1337.70598 8.37 41.88 5006 5006 MS2 15/20 Linfeng_20120125_PCAF_3.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.31 0.00 1 24 100 3 513.92810 1539.76975 6.91 42.43 5451 5451 MS2 22/44 Linfeng_20120125_PCAF_4.raw Medium KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 228 2.29 0.00 1 14 25 3 408.19653 1222.57505 4.21 3.06 298 298 MS2 17/40 Linfeng_122411_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High DYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 117 2.15 0.00 0 11 100 2 649.79846 1298.58965 7.37 40.43 4983 4983 MS2 14/18 Linfeng_20120125_PCAF_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 315 2.14 0.00 1 12 25 2 644.82178 1288.63628 -1.34 2.91 271 271 MS2 12/22 Linfeng_091311_rIgG_4.raw High KADGYNQPDSK Unambiguous 8 3 IPI00012074.3;IPI00402182.2;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.09 0.00 1 15 25 2 611.78748 1222.56767 -1.82 2.85 262 262 MS2 15/20 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 251 2.04 0.00 0 26 100 2 464.25940 927.51152 7.32 43.12 5615 5615 MS2 12/14 Linfeng_20120125_PCAF_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 83 2.04 0.00 0 7 25 2 879.89374 1758.78020 2.48 25.15 2271 2271 MS2 14/26 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 266 2.03 0.00 0 34 25 2 805.40240 1609.79753 -1.32 46.19 5465 5465 MS2 17/24 Linfeng_091311_rIgG_7.raw High LcDSYEIRPGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.02 0.00 0 27 25 2 669.32794 1337.64861 -2.44 23.40 2522 2522 MS2 15/20 Linfeng_091311_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 458 2.01 0.00 1 18 25 2 669.35229 1337.69731 1.89 30.55 2987 2987 MS2 15/20 Linfeng_122411_rIgG_4.raw High LFVGSIPK Unambiguous 13 4 IPI00012074.3;IPI00402182.2;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00644497.4 Conserved hypothetical protein 32.42 9 3 6 7 17.61 32.42 6 7 293 31.8 5.62 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QEPSQGTTTFAVTSILR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 414 3.28 0.00 0 21 25 3 612.65283 1835.94394 -3.21 38.10 4602 4602 MS2 25/64 Linfeng_091311_rIgG_10.raw Medium SGNTFRPEVHLLPPPSEELALNELVTLTcLAR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 C29(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 2.65 0.00 0 39 25 4 894.22443 3573.87588 0.65 50.00 6110 6110 MS2 40/186 Linfeng_091311_rIgG_10.raw High DASGVTFTWTPSSGK Unambiguous 9 1 IPI00644497.4 CID 1.0000 0.0000 1 1 186 2.54 0.00 0 7 25 2 770.86304 1540.71880 -5.90 35.25 4231 4231 MS2 21/28 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 304 2.50 0.00 0 17 25 2 607.31860 1213.62993 -2.08 29.17 3419 3419 MS2 18/18 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 19 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 301 2.49 0.00 0 5 25 2 607.31842 1213.62956 -2.38 29.37 3312 3312 MS2 17/18 Linfeng_091311_rIgG_9.raw High TFTcTAAYPESK Unambiguous 9 1 IPI00644497.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.14 0.00 0 3 25 2 688.31067 1375.61406 -4.23 24.50 2764 2764 MS2 16/22 Linfeng_091311_rIgG_10.raw High TPLTATLSK Unambiguous 8 1 IPI00644497.4 CID 1.0000 0.0000 1 1 439 2.02 0.00 0 11 23 2 466.27405 931.54082 -5.47 25.31 2881 2881 MS2 13/16 Linfeng_091311_rIgG_10.raw IPI00644504.2 Brix domain containing 1 21.50 3 4 4 5 14.01 21.50 4 5 0.00 214 24.6 9.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NITRPFEDQTSLEFFSK Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 308 3.93 0.00 0 11 25 3 687.00714 2059.00687 -3.07 37.67 4393 4393 MS2 37/64 Linfeng_091311_rIgG_7.raw High RTHLASDDLYK Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 466 3.19 0.00 1 20 25 3 440.22913 1318.67282 -1.67 19.92 2021 2021 MS2 22/40 Linfeng_091311_rIgG_7.raw Medium KRPNNLVIGR Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 101 2.45 0.00 1 18 25 3 389.57437 1166.70856 -2.70 17.92 1739 1739 MS2 22/36 Linfeng_091311_rIgG_7.raw Medium RTHLASDDLYK Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 435 2.28 0.00 1 67 25 3 440.22864 1318.67136 -2.78 19.97 2057 2057 MS2 20/40 Linfeng_091311_rIgG_6.raw High GPTVSNIR Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 394 2.16 0.00 0 18 25 2 422.23676 843.46623 -2.49 19.34 1937 1937 MS2 12/14 Linfeng_091311_rIgG_7.raw IPI00644712.4 X-ray repair cross-complementing protein 6 38.10 4 20 20 34 42.33 28.08 13 14 49.45 22.82 13 16 11.51 10.02 4 4 609 69.8 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLEALALDLMEPEQAVDLTLPK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 276 4.95 0.00 0 43 25 3 808.43011 2423.27579 0.76 53.33 6355 6355 MS2 38/84 Linfeng_091311_rIgG_4.raw High IISSDRDLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 269 4.61 0.00 1 5 25 3 676.03571 2026.09256 3.43 42.73 4531 4531 MS2 31/68 Linfeng_122411_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 276 4.09 0.00 0 43 25 2 1066.57507 2132.14287 0.05 51.99 6212 6212 MS2 25/36 Linfeng_091311_rIgG_4.raw High TEGDEEAEEEQEENLEASGDYK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 7 3.96 0.00 0 0 100 2 1251.00903 2501.01079 5.95 26.16 1941 1941 MS2 21/42 Linfeng_20120125_PCAF_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 411 3.93 0.00 0 11 25 2 787.41602 1573.82475 1.68 36.44 3740 3740 MS2 22/26 Linfeng_122411_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 287 3.72 0.00 0 13 25 3 711.38898 2132.15238 4.51 50.18 5447 5447 MS2 34/72 Linfeng_122411_rIgG_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 463 3.67 0.00 0 4 25 3 525.28027 1573.82627 2.64 36.49 3746 3746 MS2 33/52 Linfeng_122411_rIgG_4.raw High IISSDRDLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 294 3.65 0.00 1 10 25 3 676.03241 2026.08268 -1.45 43.81 5200 5200 MS2 32/68 Linfeng_091311_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 288 3.44 0.00 0 20 25 3 711.38721 2132.14707 2.02 51.88 6203 6203 MS2 30/72 Linfeng_091311_rIgG_4.raw High NIPPYFVALVPQEEELDDQK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 360 3.38 0.00 0 10 25 3 782.06494 2344.18027 4.03 43.15 4583 4583 MS2 31/76 Linfeng_122411_rIgG_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 313 3.38 0.00 1 11 25 3 391.56830 1172.69034 1.51 28.05 2657 2657 MS2 23/36 Linfeng_122411_rIgG_4.raw High SGLKKQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 138 3.34 0.00 2 35 25 3 519.97778 1557.91880 -1.49 28.79 2756 2756 MS2 27/52 Linfeng_122411_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 247 3.29 0.00 0 35 25 2 1066.57727 2132.14726 2.11 50.21 5451 5451 MS2 22/36 Linfeng_122411_rIgG_4.raw High NIPPYFVALVPQEEELDDQK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 344 3.16 0.00 0 23 25 3 782.06030 2344.16635 -1.91 44.44 5278 5278 MS2 29/76 Linfeng_091311_rIgG_4.raw High TFNTSTGGLLLPSDTK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 322 3.15 0.00 0 26 25 2 826.42853 1651.84978 -2.44 34.42 4005 4005 MS2 23/30 Linfeng_091311_rIgG_4.raw High LGSLVDEFKELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 334 3.06 0.00 1 19 25 3 837.09106 2509.25864 3.52 45.34 4861 4861 MS2 31/84 Linfeng_122411_rIgG_4.raw High DSLIFLVDASK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 396 3.02 0.00 0 12 25 2 604.33380 1207.66033 2.80 40.37 4233 4233 MS2 17/20 Linfeng_122411_rIgG_4.raw High DLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 388 2.98 0.00 0 14 25 2 677.86365 1354.72002 -3.94 47.58 5674 5674 MS2 19/22 Linfeng_091311_rIgG_4.raw High TFNTSTGGLLLPSDTK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 346 2.79 0.00 0 20 100 2 826.43628 1651.86528 6.94 40.16 4919 4919 MS2 21/30 Linfeng_20120125_PCAF_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 363 2.78 0.00 1 30 25 3 391.56683 1172.68595 -2.24 29.74 3392 3392 MS2 21/36 Linfeng_091311_rIgG_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 441 2.76 0.00 0 12 100 2 787.42096 1573.83464 7.96 46.43 6418 6418 MS2 20/26 Linfeng_20120125_PCAF_4.raw High DSLIFLVDASK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 420 2.74 0.00 0 6 25 2 604.33099 1207.65471 -1.85 41.71 4935 4935 MS2 18/20 Linfeng_091311_rIgG_4.raw High DLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 312 2.71 0.00 0 16 25 2 677.86853 1354.72978 3.27 46.30 4982 4982 MS2 17/22 Linfeng_122411_rIgG_4.raw High DTGIFLDLMHLK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 421 2.62 0.00 0 26 25 2 701.87146 1402.73564 -3.09 45.60 5424 5424 MS2 18/22 Linfeng_091311_rIgG_4.raw Medium KPGGFDISLFYR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 341 2.47 0.00 0 3 25 3 467.25122 1399.73911 1.56 37.52 3877 3877 MS2 25/44 Linfeng_122411_rIgG_4.raw High LGSLVDEFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 280 2.33 0.00 0 4 25 2 504.27222 1007.53716 -3.66 34.11 3965 3965 MS2 15/16 Linfeng_091311_rIgG_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 358 2.33 0.00 1 18 25 2 586.84875 1172.69023 1.42 28.07 2660 2660 MS2 16/18 Linfeng_122411_rIgG_4.raw Medium IQVTPPGFQLVFLPFADDKR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 201 2.28 0.00 1 8 25 3 763.42194 2288.25125 3.22 46.52 5009 5009 MS2 25/76 Linfeng_122411_rIgG_4.raw High DIISIAEDEDLR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 311 2.19 0.00 0 25 25 2 694.84705 1388.68682 -2.61 38.88 4577 4577 MS2 19/22 Linfeng_091311_rIgG_4.raw High LGSLVDEFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 454 2.18 0.00 0 10 25 2 504.27509 1007.54289 2.04 32.83 3283 3283 MS2 15/16 Linfeng_122411_rIgG_4.raw High ELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 232 2.18 0.00 0 23 25 2 760.86530 1520.72331 -2.29 30.67 3517 3517 MS2 16/24 Linfeng_091311_rIgG_4.raw High ILELDQFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 260 2.08 0.00 0 3 19 2 503.28452 1005.56175 0.18 33.84 3412 3412 MS2 13/14 Linfeng_122411_rIgG_4.raw High VEYSEEELK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 176 2.06 0.00 0 11 25 2 563.26697 1125.52666 -3.90 23.64 2556 2556 MS2 13/16 Linfeng_091311_rIgG_4.raw High LGSLVDEFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 422 2.01 0.00 0 31 100 2 504.27731 1007.54735 6.46 41.38 5205 5205 MS2 12/16 Linfeng_20120125_PCAF_4.raw IPI00645339.2 39 kDa protein 11.63 6 4 4 4 9.63 11.63 4 4 0.00 344 38.5 9.44 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SGASVVAIR Unambiguous 6 1 IPI00645339.2 CID 1.0000 0.0000 1 1 885 2.93 0.00 0 34 25 2 430.25189 859.49651 -3.65 22.80 2438 2438 MS2 15/16 Linfeng_091311_rIgG_4.raw High GASGSFVVVQK Unambiguous 5 1 IPI00645339.2 CID 1.0000 0.0000 1 1 397 2.58 0.00 0 38 25 2 539.79639 1078.58550 -3.43 25.22 2778 2778 MS2 15/20 Linfeng_091311_rIgG_4.raw High GQLEQITGK Unambiguous 5 1 IPI00645339.2 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 15 25 2 487.26755 973.52782 -3.61 23.65 2557 2557 MS2 14/16 Linfeng_091311_rIgG_4.raw High SSAVDPEPQVK Unambiguous 6 1 IPI00645339.2 CID 1.0000 0.0000 1 1 287 2.02 0.00 0 7 25 2 578.79492 1156.58257 -1.67 20.12 2065 2065 MS2 14/20 Linfeng_091311_rIgG_4.raw IPI00645869.1 Isoform 2 of Protein LAS1 homolog 24.69 5 12 12 15 38.58 22.32 10 11 8.79 5.16 4 4 717 81.2 4.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IcSIYTQSGENSLVQEGSEASPIGK Unambiguous 3 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 5.54 0.00 0 7 25 3 885.42285 2654.25400 -2.83 34.26 3993 3993 MS2 36/96 Linfeng_091311_rIgG_3.raw High cLAQEVNIPDWIVDLR Unambiguous 4 1 IPI00645869.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 3.99 0.00 0 26 25 2 970.99786 1940.98845 -0.78 48.26 5761 5761 MS2 22/30 Linfeng_091311_rIgG_3.raw High SGNELPLAVASTADLIR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 328 3.84 0.00 0 33 25 2 863.96802 1726.92876 -2.73 41.46 4909 4909 MS2 24/32 Linfeng_091311_rIgG_3.raw High AQQQEEQGSVNDVKEEEKEEK Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 130 3.77 0.00 2 4 25 4 616.03772 2461.12905 -1.45 18.48 1845 1845 MS2 40/120 Linfeng_091311_rIgG_3.raw High GLHSQNFTQALLER Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 400 3.52 0.00 0 27 25 3 538.61682 1613.83591 -2.22 31.82 3678 3678 MS2 23/52 Linfeng_091311_rIgG_3.raw High LLDVTGGLGTDELR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 426 3.36 0.00 0 31 25 2 729.89136 1458.77544 -3.08 36.78 4319 4319 MS2 22/26 Linfeng_091311_rIgG_3.raw High GcYFVLDWLQK Unambiguous 4 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 3.30 0.00 0 25 25 2 714.85193 1428.69658 -1.05 46.35 5521 5521 MS2 17/20 Linfeng_091311_rIgG_3.raw High GALQGSAWQVSSEDVR Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 303 3.12 0.00 0 24 25 2 845.41113 1689.81499 -2.48 31.10 3580 3580 MS2 21/30 Linfeng_091311_rIgG_3.raw High GSLPLSAHGIVVAWLSR Unambiguous 5 1 IPI00645869.1 CID 1.0000 0.0000 1 1 185 3.04 0.00 0 1 25 3 588.33588 1762.99308 -1.86 43.05 5108 5108 MS2 30/64 Linfeng_091311_rIgG_3.raw High SGNELPLAVASTADLIR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 330 2.67 0.00 0 23 25 3 576.31506 1726.93064 -1.65 41.53 4918 4918 MS2 31/64 Linfeng_091311_rIgG_3.raw High VEcVLAELK Unambiguous 3 1 IPI00645869.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 708 2.48 0.00 0 31 25 2 530.78961 1060.57195 1.11 31.05 2908 2908 MS2 13/16 Linfeng_122411_rIgG_3.raw High FSAGQWEAR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 221 2.43 0.00 0 54 25 2 526.25018 1051.49309 -2.41 27.77 3132 3132 MS2 14/16 Linfeng_091311_rIgG_3.raw High FVNLISER Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 481 2.29 0.00 0 23 25 2 489.27524 977.54320 1.74 29.94 2763 2763 MS2 14/14 Linfeng_122411_rIgG_3.raw High GcYFVLDWLQK Unambiguous 4 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 2.01 0.00 0 46 25 2 714.85419 1428.70110 2.11 45.36 4751 4751 MS2 15/20 Linfeng_122411_rIgG_3.raw High FSAGQWEAR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 223 2.00 0.00 0 56 25 2 526.25275 1051.49822 2.47 24.18 2004 2004 MS2 12/16 Linfeng_122411_rIgG_3.raw IPI00647896.1 "Tubulin, beta" 17.20 4 4 4 7 0.00 20.29 17.20 4 7 372 41.7 4.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GHYTEGAELVDSVLDVVR Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 417 3.52 0.00 0 8 14 3 653.66553 1958.98203 0.08 42.84 4797 4797 MS2 33/68 Linfeng_122411_rIgG_5.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 465 3.22 0.00 0 10 10 3 553.97015 1659.89591 0.37 40.77 4515 4515 MS2 29/56 Linfeng_122411_rIgG_5.raw High MAVTFIGNSTAIQELFK Unambiguous 4 1 IPI00647896.1 CID 1.0000 0.0000 1 1 396 3.06 0.00 0 47 25 3 623.99719 1869.97702 -0.52 45.51 5144 5144 MS2 37/64 Linfeng_122411_rIgG_5.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 391 2.83 0.00 0 7 25 3 553.97125 1659.89920 2.36 40.48 4294 4294 MS2 28/56 Linfeng_122411_rIgG_6.raw High NSSYFVEWIPNNVK Unambiguous 4 1 IPI00647896.1 CID 1.0000 0.0000 1 1 325 2.68 0.00 0 15 25 2 848.92224 1696.83721 2.48 39.47 4169 4169 MS2 13/26 Linfeng_122411_rIgG_6.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 317 2.52 0.00 0 15 25 2 830.45398 1659.90068 3.25 40.77 4330 4330 MS2 18/28 Linfeng_122411_rIgG_6.raw Medium ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 387 2.47 0.00 0 34 25 3 553.97125 1659.89920 2.36 40.66 3750 3750 MS2 26/56 Linfeng_122411_rIgG_7.raw IPI00651653.1 Isoform 3 of Probable ATP-dependent RNA helicase DDX17 21.78 7 7 12 22 17.96 13.65 7 7 17.19 10.28 6 6 22.34 10.12 5 9 652 72.5 8.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 328 3.64 0.00 0 12 100 2 846.42273 1691.83818 8.64 38.62 4565 4565 MS2 21/28 Linfeng_20120125_PCAF_4.raw High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 303 3.41 0.00 0 7 25 2 846.41803 1691.82878 3.08 32.96 3300 3300 MS2 22/28 Linfeng_122411_rIgG_4.raw High GTAYTFFTPGNLK Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 376 3.31 0.00 0 15 25 2 708.86188 1416.71648 0.45 35.95 3679 3679 MS2 18/24 Linfeng_122411_rIgG_4.raw High SSQSSSQQFSGIGR Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 169 3.11 0.00 0 4 25 2 728.34302 1455.67876 -2.44 23.39 2521 2521 MS2 20/26 Linfeng_091311_rIgG_4.raw High FVINYDYPNSSEDYVHR Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 155 2.84 0.00 0 33 100 3 706.66290 2117.97416 8.41 39.48 4472 4472 MS2 16/64 Linfeng_20120125_PCAF_3.raw High SGKAPILIATDVASR Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 303 2.83 0.00 1 34 25 3 500.29199 1498.86142 1.72 27.92 2639 2639 MS2 26/56 Linfeng_122411_rIgG_4.raw High STcIYGGAPK Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 2.80 0.00 0 10 25 2 527.25403 1053.50078 -2.48 21.34 2235 2235 MS2 16/18 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 186 2.74 0.00 0 6 25 2 613.85974 1226.71221 1.49 30.62 2996 2996 MS2 19/22 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 2.72 0.00 0 25 25 2 684.86682 1368.72637 -3.00 37.48 4399 4399 MS2 18/24 Linfeng_091311_rIgG_4.raw High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 311 2.71 0.00 0 21 100 2 846.42297 1691.83867 8.92 38.68 4295 4295 MS2 18/28 Linfeng_20120125_PCAF_3.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 154 2.51 0.00 0 8 67 2 613.86279 1226.71831 6.46 36.66 4114 4114 MS2 18/22 Linfeng_20120125_PCAF_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.51 0.00 0 31 25 2 684.86975 1368.73223 1.28 36.28 3721 3721 MS2 18/24 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 167 2.50 0.00 0 9 22 2 613.85651 1226.70574 -3.79 32.24 3723 3723 MS2 18/22 Linfeng_091311_rIgG_4.raw Medium FVINYDYPNSSEDYVHR Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 68 2.44 0.00 0 24 25 3 706.65540 2117.95163 -2.23 33.44 3879 3879 MS2 20/64 Linfeng_091311_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.40 0.00 0 24 25 2 586.80963 1172.61199 2.30 28.86 2766 2766 MS2 16/20 Linfeng_122411_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.33 0.00 0 38 25 2 586.80688 1172.60649 -2.38 30.52 3497 3497 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium FVINYDYPNSSEDYVHR Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 148 2.30 0.00 0 32 100 3 706.66199 2117.97141 7.11 39.70 4814 4814 MS2 17/64 Linfeng_20120125_PCAF_4.raw High MLDMGFEPQIR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 288 2.23 0.00 0 13 100 2 668.82739 1336.64751 6.45 45.53 6201 6201 MS2 17/20 Linfeng_20120125_PCAF_4.raw High NFYVEHPEVAR Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 357 2.09 0.00 0 43 100 2 680.84106 1360.67485 7.63 26.66 2026 2026 MS2 12/20 Linfeng_20120125_PCAF_4.raw High VLEEANQAINPK Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 323 2.05 0.00 0 9 25 2 663.35443 1325.70159 -3.35 24.18 2632 2632 MS2 18/22 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 176 2.00 0.00 0 15 81 2 613.86298 1226.71868 6.76 36.84 4156 4156 MS2 19/22 Linfeng_20120125_PCAF_4.raw High MLDMGFEPQIR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 CID 1.0000 0.0000 1 1 290 2.00 0.00 0 9 100 2 668.82819 1336.64910 7.63 45.64 6228 6228 MS2 16/20 Linfeng_20120125_PCAF_4.raw IPI00654555.3 NOP2 protein 17.40 3 11 11 14 33.02 17.40 11 11 8.54 4.38 3 3 845 92.8 9.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQASSSFQDSSQPAGK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 112 3.96 0.00 0 13 25 2 813.37280 1625.73833 -1.17 18.62 1863 1863 MS2 23/30 Linfeng_091311_rIgG_3.raw High NTGVILANDANAER Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 306 3.95 0.00 0 26 25 2 729.36786 1457.72844 -4.07 25.33 2798 2798 MS2 23/26 Linfeng_091311_rIgG_3.raw High DLAIYYSYGDFLLGK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 327 3.22 0.00 0 31 25 2 869.44073 1737.87419 0.42 48.66 5811 5811 MS2 22/28 Linfeng_091311_rIgG_3.raw High GADSELSTVPSVTK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 455 3.17 0.00 0 0 25 2 695.85510 1390.70293 -2.27 4.41 491 491 MS2 22/26 Linfeng_122411_rIgG_3.raw High GADSELSTVPSVTK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 448 3.03 0.00 0 4 25 2 695.85516 1390.70305 -2.18 27.16 3048 3048 MS2 21/26 Linfeng_091311_rIgG_3.raw High GISAGAVQTAGK Unambiguous 2 1 IPI00654555.3 CID 1.0000 0.0000 1 1 575 3.02 0.00 0 19 25 2 530.29205 1059.57683 -2.39 20.03 2063 2063 MS2 20/22 Linfeng_091311_rIgG_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 477 2.99 0.00 0 14 23 3 515.93945 1545.80381 1.15 29.59 2717 2717 MS2 24/52 Linfeng_122411_rIgG_3.raw High VLLDAPcSGTGVISK Unambiguous 3 1 IPI00654555.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 423 2.91 0.00 0 17 25 2 758.90387 1516.80046 -2.36 30.57 3511 3511 MS2 22/28 Linfeng_091311_rIgG_3.raw High GTDTQTPAVLSPSK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 358 2.82 0.00 0 12 25 2 701.36273 1401.71819 -2.76 24.33 2658 2658 MS2 18/26 Linfeng_091311_rIgG_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 445 2.82 0.00 0 20 25 3 515.93732 1545.79740 -3.00 30.60 3515 3515 MS2 25/52 Linfeng_091311_rIgG_3.raw High DLAQALINR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 311 2.54 0.00 0 11 25 2 507.28909 1013.57091 -2.92 34.30 3997 3997 MS2 15/16 Linfeng_091311_rIgG_3.raw High LVPTGLDFGQEGFTR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 296 2.47 0.00 0 28 25 2 818.91779 1636.82829 -2.89 38.33 4515 4515 MS2 18/28 Linfeng_091311_rIgG_3.raw High IQDIVGILR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 207 2.38 0.00 0 12 25 2 513.81970 1026.63213 1.43 34.95 3409 3409 MS2 15/16 Linfeng_122411_rIgG_3.raw High IQDIVGILR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 158 2.27 0.00 0 17 25 2 513.81763 1026.62798 -2.61 36.07 4227 4227 MS2 15/16 Linfeng_091311_rIgG_3.raw IPI00736859.1 Isoform 4 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 14.02 4 7 7 10 19.41 11.38 5 6 12.61 10.05 4 4 756 84.7 8.78 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NYILDQTNVYGSAQR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 249 4.44 0.00 0 4 25 2 871.42700 1741.84673 -2.13 31.88 3685 3685 MS2 25/28 Linfeng_091311_rIgG_3.raw High IGWSLDScSTQLGEEPFSYGYGGTGK Unambiguous 3 1 IPI00736859.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 90 4.09 0.00 0 27 25 3 932.75641 2796.25467 3.15 41.14 4203 4203 MS2 33/100 Linfeng_122411_rIgG_3.raw High IGWSLDScSTQLGEEPFSYGYGGTGK Unambiguous 3 1 IPI00736859.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 4.09 0.00 0 24 25 3 932.75073 2796.23764 -2.94 41.91 4965 4965 MS2 38/100 Linfeng_091311_rIgG_3.raw High QNQFYDTQVIKQENESGYER Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 154 3.74 0.00 1 6 25 3 826.05298 2476.14438 2.74 26.70 2335 2335 MS2 23/76 Linfeng_122411_rIgG_3.raw High SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 300 3.46 0.00 0 56 25 2 1038.01575 2075.02422 0.42 50.79 6073 6073 MS2 23/36 Linfeng_091311_rIgG_3.raw High KAIVIcPTDEDLKDR Unambiguous 4 1 IPI00736859.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 2.78 0.00 2 17 25 3 591.64392 1772.91721 -2.25 25.16 2775 2775 MS2 19/56 Linfeng_091311_rIgG_3.raw High SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 352 2.55 0.00 0 22 25 3 692.34528 2075.02127 -1.00 50.78 6071 6071 MS2 25/72 Linfeng_091311_rIgG_3.raw Medium SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 383 2.46 0.00 0 44 25 3 692.34912 2075.03281 4.56 49.57 5288 5288 MS2 21/72 Linfeng_122411_rIgG_3.raw High NcAVEFNFGQR Unambiguous 4 1 IPI00736859.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 112 2.32 0.00 0 39 25 2 671.30463 1341.60198 1.10 31.35 2948 2948 MS2 16/20 Linfeng_122411_rIgG_3.raw High QNQFYDTQVIK Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 346 2.09 0.00 0 51 25 2 692.34802 1383.68877 -1.14 29.38 3350 3350 MS2 14/20 Linfeng_091311_rIgG_3.raw IPI00743629.2 "Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B" 14.01 4 4 4 4 10.27 14.01 4 4 357 43.1 5.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAEFLSEHPNVTLTISAAR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 372 2.97 0.00 0 26 25 3 690.36981 2069.09488 -3.76 37.44 4364 4364 MS2 24/72 Linfeng_091311_rIgG_7.raw High FDENYAFLHR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 174 2.76 0.00 0 9 25 3 437.87378 1311.60678 -3.75 31.37 3582 3582 MS2 20/36 Linfeng_091311_rIgG_7.raw High SNLLWDTGVFR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 304 2.47 0.00 0 6 25 2 654.33990 1307.67253 -1.37 41.82 4915 4915 MS2 17/20 Linfeng_091311_rIgG_7.raw High QTYLcYEVER Unambiguous 3 1 IPI00743629.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 129 2.08 0.00 0 45 25 2 680.81226 1360.61724 -2.18 30.00 3398 3398 MS2 10/18 Linfeng_091311_rIgG_7.raw IPI00744148.2 Isoform 1 of Core histone macro-H2A.1 44.44 6 17 17 61 61.31 43.36 14 19 63.04 44.44 14 20 63.47 27.37 6 22 369 39.2 9.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 155 5.08 0.00 0 0 12 2 1064.00537 2127.00347 -2.56 33.41 3860 3860 MS2 25/42 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 163 4.95 0.00 0 0 25 2 1064.00586 2127.00444 -2.10 32.34 3721 3721 MS2 26/42 Linfeng_091311_rIgG_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 142 4.88 0.00 0 11 25 2 993.56915 1986.13103 -3.68 38.08 4457 4457 MS2 21/38 Linfeng_091311_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 151 4.87 0.00 0 1 16 2 967.04608 1933.08489 4.91 55.21 7736 7736 MS2 27/32 Linfeng_20120125_PCAF_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 202 4.81 0.00 0 1 25 2 1064.01074 2127.01421 2.49 32.27 3268 3268 MS2 25/42 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 205 4.80 0.00 0 2 25 3 645.03204 1933.08158 3.20 39.81 4211 4211 MS2 36/64 Linfeng_122411_rIgG_6.raw High FVIHcNSPVWGADKcEELLEK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 4.76 0.00 1 7 25 3 844.40399 2531.19742 -3.33 33.54 3877 3877 MS2 30/80 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 214 4.76 0.00 0 4 100 2 1064.01563 2127.02397 7.09 37.34 4877 4877 MS2 23/42 Linfeng_20120125_PCAF_1.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 189 4.55 0.00 0 12 25 2 967.04413 1933.08098 2.89 39.88 4219 4219 MS2 28/32 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 238 4.52 0.00 0 7 9 3 645.02881 1933.07187 -1.82 40.64 4777 4777 MS2 34/64 Linfeng_091311_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 157 4.22 0.00 0 1 32 2 967.04761 1933.08794 6.49 55.23 8175 8175 MS2 26/32 Linfeng_20120125_PCAF_1.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 203 4.00 0.00 0 0 100 2 1064.01660 2127.02593 8.00 37.11 4382 4382 MS2 24/42 Linfeng_20120125_PCAF_6.raw High KGGKEFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 227 3.69 0.00 2 10 25 3 525.63562 1574.89231 1.36 37.29 3897 3897 MS2 25/52 Linfeng_122411_rIgG_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 109 3.68 0.00 0 2 25 2 993.57379 1986.14031 0.99 37.17 3882 3882 MS2 16/38 Linfeng_122411_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 239 3.67 0.00 0 16 25 3 709.67590 2127.01316 2.00 31.11 3118 3118 MS2 33/84 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 220 3.59 0.00 0 3 25 4 484.02548 1933.08010 2.44 39.90 4222 4222 MS2 42/96 Linfeng_122411_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 233 3.56 0.00 0 3 15 3 709.67609 2127.01371 2.26 32.26 3266 3266 MS2 39/84 Linfeng_122411_rIgG_6.raw High GGKEFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 345 3.44 0.00 1 3 25 3 482.93762 1446.79831 2.16 40.23 4263 4263 MS2 26/48 Linfeng_122411_rIgG_6.raw High FVIHcNSPVWGADK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.38 0.00 0 26 25 2 815.39435 1629.78142 -1.76 30.76 3516 3516 MS2 21/26 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 213 3.38 0.00 0 9 8 3 709.67230 2127.00235 -3.08 33.40 3859 3859 MS2 36/84 Linfeng_091311_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 232 3.27 0.00 0 28 25 3 645.02826 1933.07022 -2.67 40.77 4783 4783 MS2 29/64 Linfeng_091311_rIgG_7.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 211 3.17 0.00 0 4 100 2 1064.01526 2127.02324 6.74 34.80 3844 3844 MS2 18/42 Linfeng_20120125_PCAF_6.raw High FVIHcNSPVWGADK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 258 3.13 0.00 0 19 25 3 543.93304 1629.78458 0.17 29.60 2920 2920 MS2 26/52 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 148 3.09 0.00 0 33 100 2 967.04724 1933.08721 6.11 55.41 7796 7796 MS2 19/32 Linfeng_20120125_PCAF_6.raw High FVIHcNSPVWGADKcEELLEK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 234 3.09 0.00 1 4 10 4 633.55505 2531.19838 -2.95 33.42 3861 3861 MS2 40/120 Linfeng_091311_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 363 3.01 0.00 0 19 25 3 605.99603 1815.97354 1.25 30.69 3063 3063 MS2 31/76 Linfeng_122411_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 263 3.00 0.00 0 27 100 2 908.49670 1815.98613 8.18 39.12 4851 4851 MS2 18/38 Linfeng_20120125_PCAF_6.raw High NcLALADDKK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 430 2.96 0.00 1 24 25 3 383.19687 1147.57605 -1.39 19.93 2051 2051 MS2 23/36 Linfeng_091311_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 290 2.88 0.00 0 22 100 2 908.49493 1815.98259 6.23 39.30 5346 5346 MS2 21/38 Linfeng_20120125_PCAF_1.raw High NcLALADDK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.81 0.00 0 14 25 2 510.24329 1019.47930 -3.32 23.93 2597 2597 MS2 14/16 Linfeng_091311_rIgG_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 111 2.81 0.00 0 9 41 3 662.72034 1986.14646 4.09 48.42 7532 7532 MS2 21/76 Linfeng_20120125_PCAF_1.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 96 2.79 0.00 1 39 25 2 667.90381 1334.80034 -2.96 27.83 3122 3122 MS2 19/24 Linfeng_091311_rIgG_6.raw High NcLALADDKK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 514 2.75 0.00 1 12 25 3 383.19760 1147.57825 0.53 3.69 378 378 MS2 21/36 Linfeng_122411_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 269 2.75 0.00 0 17 100 2 908.49530 1815.98332 6.63 39.54 5402 5402 MS2 21/38 Linfeng_20120125_PCAF_1.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 112 2.72 0.00 0 24 79 3 662.72021 1986.14609 3.90 48.37 7084 7084 MS2 26/76 Linfeng_20120125_PCAF_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 205 2.62 0.00 0 8 100 2 1064.01514 2127.02300 6.63 37.21 4997 4997 MS2 19/42 Linfeng_20120125_PCAF_5.raw High LEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 125 2.54 0.00 0 41 25 2 575.34839 1149.68950 1.43 27.79 2679 2679 MS2 15/20 Linfeng_122411_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 269 2.52 0.00 0 19 100 2 908.49615 1815.98503 7.57 39.25 4880 4880 MS2 20/38 Linfeng_20120125_PCAF_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 88 2.47 0.00 1 24 100 2 667.91058 1334.81389 7.19 35.32 3967 3967 MS2 13/24 Linfeng_20120125_PCAF_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 410 2.47 0.00 0 24 25 2 458.27441 915.54155 0.47 30.67 3060 3060 MS2 14/16 Linfeng_122411_rIgG_6.raw High LEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 153 2.40 0.00 0 37 25 2 575.34589 1149.68450 -2.92 29.53 3350 3350 MS2 16/20 Linfeng_091311_rIgG_6.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 440 2.39 0.00 0 22 25 2 546.29736 1091.58745 2.76 32.26 3267 3267 MS2 16/20 Linfeng_122411_rIgG_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 350 2.38 0.00 0 9 14 2 458.27316 915.53905 -2.26 30.07 3043 3043 MS2 13/16 Linfeng_122411_rIgG_5.raw High EFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 439 2.38 0.00 0 8 17 2 602.83093 1204.65459 -2.24 41.25 4854 4854 MS2 16/18 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 90 2.37 0.00 1 24 100 2 667.91040 1334.81352 6.92 35.12 3919 3919 MS2 14/24 Linfeng_20120125_PCAF_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 260 2.34 0.00 0 21 100 2 908.49591 1815.98454 7.30 39.44 4925 4925 MS2 17/38 Linfeng_20120125_PCAF_6.raw Medium NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 382 2.31 0.00 0 35 25 3 605.99371 1815.96659 -2.59 31.82 3653 3653 MS2 22/76 Linfeng_091311_rIgG_6.raw Medium NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 365 2.31 0.00 0 8 100 3 605.99963 1815.98435 7.20 39.31 4894 4894 MS2 26/76 Linfeng_20120125_PCAF_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 96 2.28 0.00 1 33 100 2 667.91071 1334.81413 7.37 35.26 3952 3952 MS2 13/24 Linfeng_20120125_PCAF_6.raw Medium GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 127 2.28 0.00 0 4 25 3 662.71857 1986.14115 1.41 37.00 3861 3861 MS2 26/76 Linfeng_122411_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 84 2.25 0.00 1 36 25 2 667.90717 1334.80705 2.07 26.51 2510 2510 MS2 17/24 Linfeng_122411_rIgG_6.raw High SLFLGQK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 272 2.23 0.00 0 5 11 2 396.73328 792.45928 -2.74 28.89 3266 3266 MS2 10/12 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 91 2.18 0.00 1 22 100 2 667.91046 1334.81365 7.01 34.88 3862 3862 MS2 16/24 Linfeng_20120125_PCAF_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 86 2.08 0.00 1 46 100 2 667.91058 1334.81389 7.19 35.37 3979 3979 MS2 12/24 Linfeng_20120125_PCAF_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 381 2.08 0.00 0 27 25 2 458.27283 915.53838 -3.00 32.43 3723 3723 MS2 13/16 Linfeng_091311_rIgG_7.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 326 2.05 0.00 0 11 25 2 458.27267 915.53807 -3.33 32.23 3707 3707 MS2 13/16 Linfeng_091311_rIgG_6.raw High cEELLEK Unambiguous 5 1 IPI00744148.2 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 278 2.03 0.00 0 21 25 2 460.72375 920.44023 0.90 4.71 528 528 MS2 10/12 Linfeng_122411_rIgG_6.raw High SLFLGQK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 286 2.02 0.00 0 15 25 2 396.73480 792.46233 1.11 24.74 2317 2317 MS2 10/12 Linfeng_122411_rIgG_5.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 333 2.02 0.00 0 40 100 2 458.27704 915.54680 6.20 35.94 4114 4114 MS2 13/16 Linfeng_20120125_PCAF_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 375 2.01 0.00 0 52 100 2 458.27698 915.54668 6.07 35.58 4451 4451 MS2 12/16 Linfeng_20120125_PCAF_1.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 393 2.01 0.00 0 33 20 2 546.29443 1091.58159 -2.61 33.29 3845 3845 MS2 15/20 Linfeng_091311_rIgG_6.raw IPI00745872.2 Isoform 1 of Serum albumin 23.65 11 13 13 75 126.59 20.85 10 42 22.00 5.25 3 7 78.12 4.11 3 26 609 69.3 6.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 335 4.48 0.00 0 22 25 3 682.36786 2045.08902 -3.15 40.38 4892 4892 MS2 35/64 Linfeng_091311_rIgG_10.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 173 4.30 0.00 1 27 100 3 547.32074 1639.94767 6.00 35.41 3829 3829 MS2 30/56 Linfeng_20120125_PCAF_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 203 4.24 0.00 1 5 10 3 547.31586 1639.93302 -2.93 29.30 3377 3377 MS2 32/56 Linfeng_091311_rIgG_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 174 4.24 0.00 1 8 25 3 547.31873 1639.94162 2.32 27.48 2467 2467 MS2 29/56 Linfeng_122411_rIgG_2.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 234 4.23 0.00 1 8 25 3 489.95135 1467.83951 -2.45 33.68 3962 3962 MS2 33/44 Linfeng_091311_rIgG_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 163 4.22 0.00 1 14 4 3 547.31549 1639.93192 -3.60 29.44 3086 3086 MS2 30/56 Linfeng_091311_rIgG_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 186 4.14 0.00 1 29 100 3 547.32092 1639.94822 6.34 35.18 3599 3599 MS2 29/56 Linfeng_20120125_PCAF_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 173 4.08 0.00 1 13 25 3 547.31891 1639.94217 2.65 27.68 2608 2608 MS2 32/56 Linfeng_122411_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 175 4.04 0.00 1 15 100 3 547.32050 1639.94693 5.56 34.49 3468 3468 MS2 27/56 Linfeng_20120125_PCAF_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 163 4.00 0.00 1 12 25 3 547.31543 1639.93174 -3.71 29.51 3332 3332 MS2 29/56 Linfeng_091311_rIgG_7.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 195 4.00 0.00 1 14 25 3 547.31635 1639.93448 -2.04 29.13 3317 3317 MS2 26/56 Linfeng_091311_rIgG_3.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 230 3.85 0.00 1 5 25 3 489.95157 1467.84015 -2.02 33.81 3927 3927 MS2 33/44 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 185 3.84 0.00 1 30 100 3 547.32098 1639.94840 6.45 34.57 4208 4208 MS2 28/56 Linfeng_20120125_PCAF_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 198 3.80 0.00 1 16 24 3 547.31622 1639.93412 -2.26 29.24 3325 3325 MS2 30/56 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 185 3.80 0.00 1 5 100 3 547.32123 1639.94913 6.90 34.70 3823 3823 MS2 31/56 Linfeng_20120125_PCAF_6.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 187 3.78 0.00 1 20 100 3 547.32080 1639.94785 6.11 34.40 3601 3601 MS2 30/56 Linfeng_20120125_PCAF_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 203 3.77 0.00 1 19 25 3 547.31586 1639.93302 -2.93 29.50 3346 3346 MS2 28/56 Linfeng_091311_rIgG_6.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 175 3.55 0.00 1 32 25 3 547.31854 1639.94107 1.98 27.55 2448 2448 MS2 28/56 Linfeng_122411_rIgG_3.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 174 3.49 0.00 1 17 100 3 547.32068 1639.94748 5.89 34.18 4237 4237 MS2 30/56 Linfeng_20120125_PCAF_8.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 232 3.48 0.00 1 14 25 3 489.95154 1467.84006 -2.08 34.09 3903 3903 MS2 29/44 Linfeng_091311_rIgG_5.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 324 3.45 0.00 0 34 25 3 682.36859 2045.09122 -2.08 40.60 4772 4772 MS2 28/64 Linfeng_091311_rIgG_6.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 185 3.44 0.00 1 15 100 3 547.32098 1639.94840 6.45 35.67 3891 3891 MS2 27/56 Linfeng_20120125_PCAF_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 201 3.37 0.00 1 38 25 3 547.31573 1639.93265 -3.15 29.34 3442 3442 MS2 27/56 Linfeng_091311_rIgG_10.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 175 3.32 0.00 1 42 100 3 547.32050 1639.94693 5.56 34.48 4187 4187 MS2 23/56 Linfeng_20120125_PCAF_1.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 205 3.32 0.00 1 21 25 3 489.95090 1467.83814 -3.39 34.14 3942 3942 MS2 30/44 Linfeng_091311_rIgG_7.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 342 3.32 0.00 0 25 25 3 682.36761 2045.08829 -3.51 40.59 4761 4761 MS2 29/64 Linfeng_091311_rIgG_9.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 233 3.31 0.00 1 19 25 3 489.95102 1467.83850 -3.14 34.09 3930 3930 MS2 29/44 Linfeng_091311_rIgG_9.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 198 3.27 0.00 1 18 25 3 547.31622 1639.93412 -2.26 29.46 3290 3290 MS2 24/56 Linfeng_091311_rIgG_5.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 190 3.20 0.00 1 36 25 3 547.31757 1639.93814 0.20 26.80 2592 2592 MS2 27/56 Linfeng_122411_rIgG_5.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 209 3.17 0.00 1 39 25 3 489.95081 1467.83786 -3.58 33.65 3915 3915 MS2 30/44 Linfeng_091311_rIgG_3.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 184 3.15 0.00 1 46 100 3 547.32104 1639.94858 6.56 34.94 4299 4299 MS2 24/56 Linfeng_20120125_PCAF_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 164 3.09 0.00 1 27 25 3 547.31512 1639.93082 -4.27 29.53 3398 3398 MS2 25/56 Linfeng_091311_rIgG_8.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 174 3.05 0.00 1 19 100 3 547.32074 1639.94767 6.00 34.59 3389 3389 MS2 25/56 Linfeng_20120125_PCAF_7.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 134 2.98 0.00 1 7 25 2 820.46960 1639.93193 -3.59 29.48 3091 3091 MS2 20/28 Linfeng_091311_rIgG_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 187 2.97 0.00 1 31 100 3 547.32092 1639.94822 6.34 34.65 3407 3407 MS2 26/56 Linfeng_20120125_PCAF_3.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 146 2.93 0.00 1 16 100 2 820.47809 1639.94890 6.76 34.63 3650 3650 MS2 19/28 Linfeng_20120125_PCAF_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 203 2.90 0.00 1 33 25 3 547.31580 1639.93283 -3.04 29.50 3329 3329 MS2 24/56 Linfeng_091311_rIgG_9.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 140 2.88 0.00 1 30 100 2 820.47699 1639.94670 5.42 34.79 3429 3429 MS2 17/28 Linfeng_20120125_PCAF_7.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 166 2.87 0.00 1 18 100 2 820.47803 1639.94878 6.68 34.75 3834 3834 MS2 21/28 Linfeng_20120125_PCAF_6.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 343 2.85 0.00 0 32 25 3 682.36816 2045.08994 -2.71 40.46 4776 4776 MS2 25/64 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 175 2.83 0.00 1 17 25 3 547.31842 1639.94071 1.76 28.35 2755 2755 MS2 23/56 Linfeng_122411_rIgG_6.raw High TcVADESAENcDK Unambiguous 5 1 IPI00745872.2 C2(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 10 2.83 0.00 0 4 25 2 749.79285 1498.57842 -0.07 17.09 1602 1602 MS2 21/24 Linfeng_091311_rIgG_9.raw High ccTESLVNR Unambiguous 10 1 IPI00745872.2 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 92 2.82 0.00 0 9 25 2 569.75134 1138.49541 -2.28 20.92 2177 2177 MS2 15/16 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 151 2.80 0.00 1 22 100 2 820.47803 1639.94878 6.68 34.73 3514 3514 MS2 20/28 Linfeng_20120125_PCAF_2.raw High TcVADESAENcDK Unambiguous 5 1 IPI00745872.2 C2(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 10 2.78 0.00 0 4 25 2 749.79218 1498.57707 -0.96 16.93 1692 1692 MS2 21/24 Linfeng_091311_rIgG_10.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 344 2.77 0.00 0 34 25 3 682.36816 2045.08994 -2.71 40.61 4763 4763 MS2 28/64 Linfeng_091311_rIgG_7.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 162 2.69 0.00 1 19 100 2 820.47809 1639.94890 6.76 34.85 3452 3452 MS2 19/28 Linfeng_20120125_PCAF_3.raw High YIcENQDSISSK Unambiguous 9 1 IPI00745872.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 2.63 0.00 0 8 25 2 722.32330 1443.63933 -1.90 21.52 2346 2346 MS2 20/22 Linfeng_091311_rIgG_10.raw High ccTESLVNR Unambiguous 10 1 IPI00745872.2 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 95 2.60 0.00 0 15 25 2 569.75116 1138.49504 -2.60 20.89 2181 2181 MS2 15/16 Linfeng_091311_rIgG_3.raw High ccTESLVNR Unambiguous 10 1 IPI00745872.2 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 2.56 0.00 0 19 25 2 569.75165 1138.49602 -1.74 17.84 1518 1518 MS2 15/16 Linfeng_091311_rIgG_1.raw High HPYFYAPELLFFAK Unambiguous 8 1 IPI00745872.2 CID 1.0000 0.0000 1 1 424 2.54 0.00 0 69 25 3 581.63495 1742.89029 -2.21 45.40 5402 5402 MS2 22/52 Linfeng_091311_rIgG_3.raw High YIcENQDSISSK Unambiguous 9 1 IPI00745872.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 2.54 0.00 0 15 25 2 722.32263 1443.63799 -2.83 21.63 2245 2245 MS2 19/22 Linfeng_091311_rIgG_9.raw High AAFTEccQAADK Unambiguous 7 1 IPI00745872.2 C6(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 23 2.52 0.00 0 16 25 2 686.28546 1371.56365 -2.32 20.86 2255 2255 MS2 15/22 Linfeng_091311_rIgG_10.raw High YIcENQDSISSK Unambiguous 9 1 IPI00745872.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.52 0.00 0 0 25 2 722.32355 1443.63982 -1.56 21.47 2253 2253 MS2 19/22 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 147 2.52 0.00 1 41 100 2 820.47815 1639.94902 6.83 34.85 4275 4275 MS2 16/28 Linfeng_20120125_PCAF_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 171 2.51 0.00 1 43 100 2 820.47845 1639.94963 7.20 35.56 3864 3864 MS2 16/28 Linfeng_20120125_PCAF_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 164 2.47 0.00 1 46 100 2 820.47864 1639.95000 7.43 34.85 3441 3441 MS2 15/28 Linfeng_20120125_PCAF_7.raw High VPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 243 2.37 0.00 0 16 100 2 756.43024 1511.85320 6.84 36.26 4030 4030 MS2 19/26 Linfeng_20120125_PCAF_4.raw High YIcENQDSISSK Unambiguous 9 1 IPI00745872.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 2.35 0.00 0 4 25 2 722.32141 1443.63555 -4.52 21.71 2332 2332 MS2 18/22 Linfeng_091311_rIgG_8.raw High YIcENQDSISSK Unambiguous 9 1 IPI00745872.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 85 2.33 0.00 0 4 25 2 722.32349 1443.63970 -1.65 21.75 2299 2299 MS2 17/22 Linfeng_091311_rIgG_6.raw Medium RHPDYSVVLLLR Unambiguous 9 1 IPI00745872.2 CID 1.0000 0.0000 1 1 230 2.31 0.00 1 26 25 3 489.95154 1467.84006 -2.08 34.20 3960 3960 MS2 23/44 Linfeng_091311_rIgG_6.raw Medium VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 351 2.31 0.00 0 47 25 3 682.36743 2045.08774 -3.78 40.55 4849 4849 MS2 20/64 Linfeng_091311_rIgG_8.raw High VPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 230 2.31 0.00 0 32 100 2 756.42957 1511.85185 5.95 36.26 4617 4617 MS2 16/26 Linfeng_20120125_PCAF_1.raw Medium HPYFYAPELLFFAK Unambiguous 8 1 IPI00745872.2 CID 1.0000 0.0000 1 1 410 2.29 0.00 0 76 25 3 581.63562 1742.89231 -1.05 45.69 5410 5410 MS2 19/52 Linfeng_091311_rIgG_6.raw Medium ADDKETcFAEEGK Unambiguous 8 1 IPI00745872.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 30 2.28 0.00 1 56 25 3 500.54767 1499.62845 -2.33 19.65 2083 2083 MS2 19/48 Linfeng_091311_rIgG_10.raw High LVNEVTEFAK Unambiguous 5 1 IPI00745872.2 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 0 25 2 575.30981 1149.61235 -2.37 30.04 3538 3538 MS2 16/18 Linfeng_091311_rIgG_10.raw High VPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 231 2.21 0.00 0 14 100 2 756.42987 1511.85246 6.36 36.34 3818 3818 MS2 16/26 Linfeng_20120125_PCAF_2.raw High KQTALVELVK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 203 2.19 0.00 1 3 100 2 564.85675 1128.70622 6.63 31.30 2858 2858 MS2 15/18 Linfeng_20120125_PCAF_2.raw High AAFTEccQAADK Unambiguous 7 1 IPI00745872.2 C6(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 2.15 0.00 0 14 25 2 686.28448 1371.56169 -3.74 21.08 2166 2166 MS2 16/22 Linfeng_091311_rIgG_9.raw High ccTESLVNR Unambiguous 10 1 IPI00745872.2 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 94 2.13 0.00 0 24 25 2 569.75067 1138.49407 -3.45 21.18 2181 2181 MS2 14/16 Linfeng_091311_rIgG_9.raw High YLYEIAR Unambiguous 3 1 IPI00745872.2 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 51 25 2 464.25076 927.49425 0.85 27.15 2537 2537 MS2 11/12 Linfeng_122411_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 155 2.06 0.00 1 50 100 2 820.47870 1639.95012 7.50 35.36 3560 3560 MS2 14/28 Linfeng_20120125_PCAF_3.raw High LVNEVTEFAK Unambiguous 5 1 IPI00745872.2 CID 1.0000 0.0000 1 1 363 2.01 0.00 0 18 25 2 575.30945 1149.61162 -3.00 30.16 3419 3419 MS2 15/18 Linfeng_091311_rIgG_9.raw High LVNEVTEFAK Unambiguous 5 1 IPI00745872.2 CID 1.0000 0.0000 1 1 394 2.01 0.00 0 58 25 2 575.31256 1149.61785 2.41 24.95 1908 1908 MS2 13/18 Linfeng_122411_rIgG_9.raw High KQTALVELVK Unambiguous 10 1 IPI00745872.2 CID 1.0000 0.0000 1 1 198 2.01 0.00 1 19 100 2 564.85669 1128.70610 6.52 31.93 2818 2818 MS2 15/18 Linfeng_20120125_PCAF_3.raw IPI00745955.4 Probable rRNA-processing protein EBP2 29.08 4 8 8 8 21.45 29.08 8 8 306 34.8 10.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDVTLGPVPEIGGSEAPAPQNK Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 379 4.28 0.00 0 23 25 3 730.38531 2189.14139 -1.63 37.56 4392 4392 MS2 33/84 Linfeng_091311_rIgG_6.raw Medium GFSDKLDFLEGDQKPLAQR Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 392 2.99 0.00 1 17 25 4 541.78046 2164.10000 -1.58 35.09 4075 4075 MS2 34/108 Linfeng_091311_rIgG_6.raw High QAQAAVLAVLPR Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 136 2.61 0.00 0 25 25 2 618.87292 1236.73857 -3.06 35.00 4063 4063 MS2 19/22 Linfeng_091311_rIgG_6.raw High AVDPEDDFQR Unambiguous 3 1 IPI00745955.4 CID 1.0000 0.0000 1 1 100 2.54 0.00 0 0 25 2 596.26379 1191.52031 -6.22 25.70 2841 2841 MS2 16/18 Linfeng_091311_rIgG_6.raw High VQTEVLQK Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 498 2.39 0.00 0 33 25 2 472.77310 944.53893 -2.37 19.89 2046 2046 MS2 12/14 Linfeng_091311_rIgG_6.raw High DLEWVER Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 260 2.27 0.00 0 10 25 2 473.73367 946.46007 -3.01 32.80 3782 3782 MS2 10/12 Linfeng_091311_rIgG_6.raw High KVQTEVLQK Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 324 2.23 0.00 1 22 25 2 536.82056 1072.63384 -2.14 17.22 1674 1674 MS2 12/16 Linfeng_091311_rIgG_6.raw High KAVNDVNGLK Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 389 2.13 0.00 1 28 25 2 529.30292 1057.59856 -1.45 17.11 1660 1660 MS2 11/18 Linfeng_091311_rIgG_6.raw IPI00759472.1 Isoform 2 of Inner centromere protein 3.94 2 3 3 4 0.00 10.55 3.94 3 4 914 104.9 9.45 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLAPILPDNFSTPTGSR Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 372 3.17 0.00 0 9 25 3 595.65729 1784.95731 1.74 37.28 3706 3706 MS2 26/64 Linfeng_122411_rIgG_3.raw High LLNVEVPQK Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 170 2.58 0.00 0 36 25 2 520.31219 1039.61711 2.35 25.84 2220 2220 MS2 14/16 Linfeng_122411_rIgG_3.raw High VPSSLAYSLK Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 341 2.40 0.00 0 15 25 2 532.80402 1064.60076 1.96 27.07 2385 2385 MS2 14/18 Linfeng_122411_rIgG_3.raw High VLAPILPDNFSTPTGSR Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 321 2.40 0.00 0 11 25 2 892.98260 1784.95793 2.09 37.33 3711 3711 MS2 18/32 Linfeng_122411_rIgG_3.raw IPI00783271.1 "Leucine-rich PPR motif-containing protein, mitochondrial" 12.34 4 13 13 16 0.00 49.42 12.34 13 16 1394 157.8 6.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YAGEPVPFIEPPESFEFYAQQLR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 277 5.17 0.00 0 10 25 3 905.44641 2714.32468 4.01 46.96 4957 4957 MS2 32/88 Linfeng_122411_rIgG_3.raw High DAGIEPGPDTYLALLNAYAEK Unambiguous 4 1 IPI00783271.1 CID 1.0000 0.0000 1 1 364 4.66 0.00 0 14 25 3 741.04205 2221.11161 4.14 48.24 5120 5120 MS2 33/80 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 343 3.79 0.00 0 14 25 2 862.95001 1724.89275 4.22 49.14 5235 5235 MS2 20/30 Linfeng_122411_rIgG_2.raw High LIASYcNVGDIEGASK Unambiguous 4 1 IPI00783271.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 3.63 0.00 0 8 25 2 848.91693 1696.82659 3.21 30.09 2784 2784 MS2 24/30 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 407 3.19 0.00 0 24 25 3 575.63440 1724.88864 1.85 48.99 5215 5215 MS2 28/60 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 373 3.09 0.00 0 15 25 2 862.94916 1724.89104 3.23 48.93 5207 5207 MS2 21/30 Linfeng_122411_rIgG_3.raw High VIEEQLEPAVEK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 318 3.01 0.00 0 20 25 2 692.37195 1383.73662 -0.03 4.60 519 519 MS2 19/22 Linfeng_122411_rIgG_3.raw High DYLKEAVTTLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 240 2.97 0.00 1 27 25 3 427.57556 1280.71213 1.91 31.14 2920 2920 MS2 21/40 Linfeng_122411_rIgG_3.raw High SGGLGGSHALLLLR Unambiguous 4 1 IPI00783271.1 CID 1.0000 0.0000 1 1 155 2.80 0.00 0 13 25 3 450.93420 1350.78806 2.06 32.13 3048 3048 MS2 34/52 Linfeng_122411_rIgG_3.raw High GFTLNDAANSR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 270 2.77 0.00 0 15 25 2 583.28418 1165.56108 1.20 4.73 538 538 MS2 17/20 Linfeng_122411_rIgG_3.raw High GFTLNDAANSR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 266 2.54 0.00 0 22 25 2 583.28436 1165.56145 1.52 4.76 540 540 MS2 17/20 Linfeng_122411_rIgG_2.raw Medium DAGIEPGPDTYLALLNAYAEKGDIDHVK Unambiguous 4 1 IPI00783271.1 CID 1.0000 0.0000 1 1 289 2.52 0.00 1 9 25 4 747.12878 2985.49331 3.07 44.24 4605 4605 MS2 35/162 Linfeng_122411_rIgG_3.raw High NVQGIIEILK Unambiguous 3 1 IPI00783271.1 CID 1.0000 0.0000 1 1 197 2.49 0.00 0 10 25 2 563.84650 1126.68572 2.33 37.98 3796 3796 MS2 16/18 Linfeng_122411_rIgG_3.raw High SNTLPISLQSIR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 426 2.33 0.00 0 16 25 2 664.88141 1328.75554 1.69 34.62 3368 3368 MS2 17/22 Linfeng_122411_rIgG_3.raw High GAYDIFLNAK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 332 2.29 0.00 0 27 25 2 556.29388 1111.58049 1.99 35.39 3465 3465 MS2 14/18 Linfeng_122411_rIgG_3.raw High LQDAINILK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 331 2.18 0.00 0 13 25 2 514.31158 1027.61589 1.19 31.35 2947 2947 MS2 14/16 Linfeng_122411_rIgG_3.raw IPI00784295.2 Isoform 1 of Heat shock protein HSP 90-alpha 15.85 4 5 10 20 22.11 10.11 7 9 0.00 26.02 7.38 4 11 732 84.6 5.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 373 2.90 0.00 0 12 21 2 621.85437 1242.70146 -3.08 34.74 4055 4055 MS2 18/22 Linfeng_091311_rIgG_3.raw High TLTIVDTGIGMTK Unambiguous 3 2 IPI00414676.6;IPI00784295.2 CID 1.0000 0.0000 1 2 344 2.81 0.00 0 18 100 2 675.37659 1349.74590 8.41 42.81 5224 5224 MS2 18/24 Linfeng_20120125_PCAF_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 68 2.68 0.00 0 8 25 2 656.28705 1311.56682 -2.40 25.33 2765 2765 MS2 14/18 Linfeng_091311_rIgG_7.raw High NPDDITNEEYGEFYK Unambiguous 2 1 IPI00784295.2 CID 1.0000 0.0000 1 1 57 2.63 0.00 0 0 100 2 917.40088 1833.79448 7.12 35.91 3685 3685 MS2 21/28 Linfeng_20120125_PCAF_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.63 0.00 0 15 100 2 621.86108 1242.71489 7.73 41.89 5536 5536 MS2 17/22 Linfeng_20120125_PCAF_10.raw High DQVANSAFVER Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 302 2.63 0.00 0 46 25 2 618.30029 1235.59331 -6.67 25.47 2817 2817 MS2 16/20 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 67 2.62 0.00 0 9 25 2 656.28754 1311.56780 -1.65 24.93 2742 2742 MS2 16/18 Linfeng_091311_rIgG_3.raw High LGIHEDSQNR Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 292 2.53 0.00 0 21 25 3 390.19437 1168.56855 -1.73 16.82 1610 1610 MS2 20/36 Linfeng_091311_rIgG_3.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 444 2.52 0.00 0 20 100 2 757.40216 1513.79704 7.47 41.13 5324 5324 MS2 18/26 Linfeng_20120125_PCAF_6.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 427 2.38 0.00 0 25 100 2 621.86090 1242.71453 7.43 41.83 5521 5521 MS2 17/22 Linfeng_20120125_PCAF_10.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 64 2.38 0.00 0 15 25 2 656.28754 1311.56780 -1.65 25.30 2759 2759 MS2 14/18 Linfeng_091311_rIgG_9.raw High NPDDITNEEYGEFYK Unambiguous 2 1 IPI00784295.2 CID 1.0000 0.0000 1 1 51 2.32 0.00 0 10 100 2 917.40076 1833.79424 6.99 36.04 3713 3713 MS2 21/28 Linfeng_20120125_PCAF_3.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 417 2.29 0.00 0 20 100 2 757.40228 1513.79729 7.63 41.01 4807 4807 MS2 17/26 Linfeng_20120125_PCAF_3.raw High ELISNSSDALDK Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 323 2.17 0.00 0 67 25 2 646.31921 1291.63115 -5.04 25.97 2885 2885 MS2 16/22 Linfeng_091311_rIgG_3.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 438 2.17 0.00 0 81 100 2 757.40277 1513.79827 8.27 41.00 5294 5294 MS2 15/26 Linfeng_20120125_PCAF_6.raw High YIDQEELNK Unambiguous 6 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 238 2.12 0.00 0 40 25 2 576.28137 1151.55547 -2.14 22.64 2421 2421 MS2 14/16 Linfeng_091311_rIgG_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 363 2.10 0.00 0 48 100 2 621.86072 1242.71416 7.14 41.62 4957 4957 MS2 16/22 Linfeng_20120125_PCAF_7.raw High TLTIVDTGIGMTK Unambiguous 3 2 IPI00414676.6;IPI00784295.2 CID 1.0000 0.0000 1 2 359 2.09 0.00 0 12 100 2 675.37604 1349.74480 7.59 42.76 5224 5224 MS2 16/24 Linfeng_20120125_PCAF_7.raw High GVVDSEDLPLNISR Unambiguous 3 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 420 2.08 0.00 0 18 100 2 757.40271 1513.79814 8.19 41.08 5136 5136 MS2 18/26 Linfeng_20120125_PCAF_4.raw High HIYYITGETK Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 334 2.07 0.00 0 4 25 2 612.81433 1224.62139 -3.71 23.99 2611 2611 MS2 15/18 Linfeng_091311_rIgG_3.raw IPI00784865.1 IGK@ protein 26.69 5 1 4 30 68.49 22.88 3 19 34.36 18.22 3 11 0.00 236 25.8 6.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 372 4.03 0.00 0 6 25 3 599.97125 1797.89920 2.17 44.10 4505 4505 MS2 31/60 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 395 3.86 0.00 0 11 25 3 649.34839 1946.03061 1.83 40.20 4016 4016 MS2 31/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 12 25 3 649.34894 1946.03226 2.68 41.22 4143 4143 MS2 26/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 375 3.36 0.00 0 16 25 3 649.34900 1946.03244 2.77 40.13 3683 3683 MS2 28/68 Linfeng_122411_rIgG_7.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 348 3.36 0.00 0 6 25 2 973.51831 1946.02934 1.18 40.22 4019 4019 MS2 24/34 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 397 3.31 0.00 0 21 25 3 649.34851 1946.03098 2.02 40.11 3838 3838 MS2 29/68 Linfeng_122411_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 2.88 0.00 0 18 25 2 899.45111 1797.89495 -0.19 44.33 4534 4534 MS2 17/30 Linfeng_122411_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 373 2.79 0.00 0 31 25 3 599.97186 1797.90104 3.19 44.20 4358 4358 MS2 21/60 Linfeng_122411_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw Medium SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.45 0.00 0 21 25 3 599.97168 1797.90049 2.89 44.48 4512 4512 MS2 20/60 Linfeng_122411_rIgG_10.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 393 2.44 0.00 0 53 25 3 649.34601 1946.02347 -1.84 42.54 5006 5006 MS2 25/68 Linfeng_091311_rIgG_9.raw High LLIYGASSR Unambiguous 1 1 IPI00784865.1 CID 1.0000 0.0000 1 1 237 2.43 0.00 0 33 25 2 490.28262 979.55797 0.85 21.75 1691 1691 MS2 14/16 Linfeng_122411_rIgG_8.raw Medium SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.36 0.00 0 43 25 3 599.96924 1797.89316 -1.19 45.74 5408 5408 MS2 20/60 Linfeng_091311_rIgG_7.raw High LLIYGASSR Unambiguous 1 1 IPI00784865.1 CID 1.0000 0.0000 1 1 299 2.33 0.00 0 61 25 2 490.28345 979.55962 2.53 20.74 1594 1594 MS2 12/16 Linfeng_122411_rIgG_8.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 394 2.28 0.00 0 48 25 3 649.34570 1946.02256 -2.31 43.08 5236 5236 MS2 26/68 Linfeng_091311_rIgG_10.raw IPI00784985.1 IGK@ protein 37.02 6 1 5 29 68.49 22.98 3 19 0.00 29.44 22.55 3 10 235 25.5 6.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 322 3.81 0.00 0 11 100 2 938.47144 1875.93559 4.59 26.02 2255 2255 MS2 23/32 Linfeng_20120125_PCAF_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 3.67 0.00 0 12 100 2 938.47009 1875.93291 3.16 26.06 2264 2264 MS2 20/32 Linfeng_20120125_PCAF_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 132 3.43 0.00 0 0 100 2 1068.49536 2135.98345 6.85 18.73 1320 1320 MS2 21/38 Linfeng_20120125_PCAF_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 283 3.22 0.00 0 13 89 2 816.90259 1632.79790 7.01 39.82 5616 5616 MS2 18/30 Linfeng_20120125_PCAF_8.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 307 3.11 0.00 0 18 96 2 816.90326 1632.79924 7.83 39.73 5594 5594 MS2 19/30 Linfeng_20120125_PCAF_8.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 307 3.08 0.00 0 42 100 2 816.90271 1632.79814 7.15 40.20 4839 4839 MS2 16/30 Linfeng_20120125_PCAF_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw Medium VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.46 0.00 0 2 13 3 625.98517 1875.94095 7.45 26.43 2355 2355 MS2 31/64 Linfeng_20120125_PCAF_8.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 393 2.44 0.00 0 53 25 3 649.34601 1946.02347 -1.84 42.54 5006 5006 MS2 25/68 Linfeng_091311_rIgG_9.raw Medium VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 360 2.41 0.00 0 2 100 3 625.98499 1875.94040 7.15 27.11 2514 2514 MS2 29/64 Linfeng_20120125_PCAF_8.raw Medium SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.36 0.00 0 43 25 3 599.96924 1797.89316 -1.19 45.74 5408 5408 MS2 20/60 Linfeng_091311_rIgG_7.raw Medium TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 394 2.28 0.00 0 48 25 3 649.34570 1946.02256 -2.31 43.08 5236 5236 MS2 26/68 Linfeng_091311_rIgG_10.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 341 2.17 0.00 0 82 100 2 938.47406 1875.94084 7.39 27.27 2551 2551 MS2 16/32 Linfeng_20120125_PCAF_8.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 309 2.08 0.00 0 32 100 2 816.90253 1632.79778 6.93 40.14 4826 4826 MS2 16/30 Linfeng_20120125_PCAF_9.raw IPI00786995.1 "similar to protein kinase, DNA-activated, catalytic polypeptide" 4.13 3 12 12 15 10.13 1.27 4 4 21.02 2.22 7 8 9.08 1.20 3 3 4096 465.2 7.23 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLAVLELMQSSVDNTK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 396 3.92 0.00 0 18 25 3 664.01208 1990.02170 2.75 47.62 5043 5043 MS2 34/68 Linfeng_122411_rIgG_2.raw High SLEYcSTASIDSENPPDLNK Unambiguous 3 1 IPI00786995.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 115 3.46 0.00 0 5 100 2 1120.51147 2240.01567 5.92 32.44 3687 3687 MS2 22/38 Linfeng_20120125_PCAF_1.raw High NLSSNEAISLEEIR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 450 3.07 0.00 0 27 100 2 787.91003 1574.81279 6.78 39.79 5459 5459 MS2 17/26 Linfeng_20120125_PCAF_1.raw High ATQQQHDFTLTQTADGR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 204 3.06 0.00 0 7 25 3 639.97125 1917.89920 -3.03 24.35 2397 2397 MS2 28/64 Linfeng_091311_rIgG_1.raw High NLLIFENLIDLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 163 2.84 0.00 0 37 25 2 722.92633 1444.84538 2.99 49.03 5221 5221 MS2 18/22 Linfeng_122411_rIgG_2.raw High TVGALQVLGTEAQSSLLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 183 2.74 0.00 0 6 25 2 908.01703 1815.02678 2.47 40.57 4147 4147 MS2 17/34 Linfeng_122411_rIgG_2.raw High MEVQEQEEDISSLIR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 273 2.54 0.00 0 9 100 2 903.43878 1805.87029 6.44 44.78 5548 5548 MS2 20/28 Linfeng_20120125_PCAF_2.raw High NLLIFENLIDLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 164 2.49 0.00 0 62 25 2 722.92444 1444.84160 0.37 50.03 5816 5816 MS2 18/22 Linfeng_091311_rIgG_1.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 513 2.41 0.00 0 48 25 2 588.31445 1175.62163 -4.31 27.58 2833 2833 MS2 18/20 Linfeng_091311_rIgG_1.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 526 2.39 0.00 0 58 25 2 588.31714 1175.62700 0.25 19.37 1533 1533 MS2 16/20 Linfeng_122411_rIgG_2.raw High LLALNSLYSPK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 234 2.34 0.00 0 24 25 2 609.85870 1218.71013 0.69 35.31 3482 3482 MS2 16/20 Linfeng_122411_rIgG_2.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 543 2.28 0.00 0 49 25 2 588.31702 1175.62676 0.05 18.26 1438 1438 MS2 14/20 Linfeng_122411_rIgG_2.raw High NELEIPGQYDGR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 251 2.27 0.00 0 28 25 2 695.83508 1390.66289 2.23 29.13 2657 2657 MS2 14/22 Linfeng_122411_rIgG_3.raw High DFGLLVFVR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 290 2.24 0.00 0 47 25 2 533.30933 1065.61138 2.04 46.70 4926 4926 MS2 15/16 Linfeng_122411_rIgG_2.raw High QLFSSLFSGILK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 262 2.17 0.00 0 26 25 2 670.38409 1339.76091 -0.87 47.93 5793 5793 MS2 14/22 Linfeng_091311_rIgG_2.raw IPI00788837.2 "cDNA FLJ54752, highly similar to Poly(rC)-binding protein 2" 14.54 8 2 3 7 9.97 14.54 3 4 7.09 14.54 3 3 282 29.7 7.71 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AITIAGIPQSIIEcVK Unambiguous 8 1 IPI00788837.2 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.02 0.00 0 23 25 2 856.98315 1712.95903 -1.50 43.69 5158 5158 MS2 16/30 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 143 2.68 0.00 0 2 13 2 644.79956 1288.59184 -2.52 4.21 456 456 MS2 18/20 Linfeng_122411_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 123 2.57 0.00 0 9 25 2 644.79742 1288.58757 -5.83 22.37 2382 2382 MS2 17/20 Linfeng_091311_rIgG_6.raw Medium AITIAGIPQSIIEcVK Unambiguous 8 1 IPI00788837.2 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 288 2.40 0.00 0 53 25 3 571.65961 1712.96427 1.55 42.24 4514 4514 MS2 25/60 Linfeng_122411_rIgG_6.raw High LVVPASQcGSLIGK Unambiguous 8 1 IPI00788837.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 333 2.22 0.00 0 21 25 2 714.89612 1428.78496 -2.12 30.96 3541 3541 MS2 18/26 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 2.15 0.00 0 6 25 2 644.79883 1288.59038 -3.65 22.53 2377 2377 MS2 15/20 Linfeng_091311_rIgG_7.raw High LVVPASQcGSLIGK Unambiguous 8 1 IPI00788837.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 305 2.01 0.00 0 45 25 2 714.89905 1428.79082 1.98 29.52 2910 2910 MS2 19/26 Linfeng_122411_rIgG_6.raw IPI00789041.2 Isoform 1 of Pinin 7.81 2 5 5 5 12.05 7.81 5 5 717 81.6 7.14 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VESVEPSENEASK Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 162 2.57 0.00 0 24 25 2 702.82684 1404.64641 -1.82 18.33 1822 1822 MS2 14/24 Linfeng_091311_rIgG_3.raw Medium TKPHLFYIPGR Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 434 2.48 0.00 0 16 25 3 443.58621 1328.74408 -2.50 28.16 3185 3185 MS2 25/40 Linfeng_091311_rIgG_3.raw High GFSDSGGGPPAK Unambiguous 1 1 IPI00789041.2 CID 1.0000 0.0000 1 1 166 2.46 0.00 0 23 25 2 538.75269 1076.49809 -2.50 18.31 1820 1820 MS2 16/22 Linfeng_091311_rIgG_3.raw High LEVQAEEER Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 235 2.30 0.00 0 17 25 2 551.77106 1102.53484 -2.46 20.74 2162 2162 MS2 15/16 Linfeng_091311_rIgG_3.raw High FKQESTVATER Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 288 2.25 0.00 1 18 25 2 648.33215 1295.65703 -1.57 16.66 1587 1587 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00789324.3 "cDNA FLJ60424, highly similar to Junction plakoglobin" 13.85 3 2 8 38 48.05 6.57 4 20 46.21 13.85 8 18 0.00 563 62.6 5.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAIVHLINYQDDAELATR Unambiguous 2 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 413 4.05 0.00 0 9 25 3 677.01782 2029.03891 1.94 33.28 3225 3225 MS2 29/68 Linfeng_122411_rIgG_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High AALEDTLAETEAR Unambiguous 3 1 IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.98 0.00 0 52 25 2 695.34784 1389.68840 1.95 27.18 2182 2182 MS2 15/24 Linfeng_122411_rIgG_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 398 2.44 0.00 0 38 25 2 671.36530 1341.72331 -2.07 29.23 3323 3323 MS2 17/22 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High IVLQIDNAR Unambiguous 3 1 IPI00789324.3 CID 1.0000 0.0000 1 1 281 2.17 0.00 0 18 25 2 521.30664 1041.60600 0.80 25.81 2459 2459 MS2 15/16 Linfeng_122411_rIgG_5.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 397 2.10 0.00 0 40 25 2 671.36755 1341.72783 1.30 28.07 2718 2718 MS2 14/22 Linfeng_122411_rIgG_6.raw High LAADDFR Unambiguous 27 5 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 19 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw IPI00789477.1 "cDNA FLJ58679, highly similar to Lactotransferrin" 37.54 3 1 20 23 76.02 37.54 20 23 666 73.1 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 374 5.39 0.00 0 10 15 3 696.69568 2088.07248 -1.73 45.99 5603 5603 MS2 40/72 Linfeng_091311_rIgG_10.raw High DSPIQcIQAIAENR Unambiguous 8 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 5.11 0.00 0 15 25 3 538.93390 1614.78714 -2.08 41.52 5038 5038 MS2 32/52 Linfeng_091311_rIgG_10.raw High DVTVLQNTDGNNNEAWAK Unambiguous 2 1 IPI00789477.1 CID 1.0000 0.0000 1 1 187 4.99 0.00 0 3 25 2 994.96423 1988.92119 -4.89 31.79 3775 3775 MS2 24/34 Linfeng_091311_rIgG_10.raw High SQQSSDPDPNcVDRPVEGYLAVAVVR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.98 0.00 0 4 22 3 953.45874 2858.36167 -4.27 36.43 4386 4386 MS2 37/100 Linfeng_091311_rIgG_10.raw High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 334 4.76 0.00 0 12 25 2 1044.54004 2088.07280 -1.58 46.00 5605 5605 MS2 25/36 Linfeng_091311_rIgG_10.raw High SNLcALcIGDEQGENK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 4.04 0.00 0 17 25 2 904.39893 1807.79057 -2.45 30.45 3595 3595 MS2 22/30 Linfeng_091311_rIgG_10.raw High FDEYFSQScAPGSDPR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 15 3.80 0.00 0 4 25 2 931.88385 1862.76042 -2.50 30.44 3594 3594 MS2 22/30 Linfeng_091311_rIgG_10.raw High KGGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 465 3.78 0.00 1 11 25 3 506.94531 1518.82138 -4.05 32.07 3813 3813 MS2 24/52 Linfeng_091311_rIgG_10.raw High LADFALLcLDGK Unambiguous 3 2 IPI00789477.1;IPI00903112.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.39 0.00 0 32 25 2 668.35144 1335.69560 -1.63 41.80 5074 5074 MS2 19/22 Linfeng_091311_rIgG_10.raw High THYYAVAVVK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 382 2.91 0.00 0 13 25 3 384.21240 1150.62265 -2.51 23.99 2692 2692 MS2 21/36 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 450 2.85 0.00 0 6 25 3 487.59842 1460.78070 -3.40 24.80 2808 2808 MS2 26/48 Linfeng_091311_rIgG_10.raw High DGAGDVAFIR Unambiguous 5 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 359 2.82 0.00 0 39 25 2 510.75729 1020.50731 -3.57 31.03 3673 3673 MS2 15/18 Linfeng_091311_rIgG_10.raw High NLLFNDNTEcLAR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 2.79 0.00 0 15 25 2 790.37579 1579.74431 -5.74 35.26 4233 4233 MS2 20/24 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 396 2.66 0.00 0 8 25 2 730.89404 1460.78081 -3.33 24.88 2819 2819 MS2 18/24 Linfeng_091311_rIgG_10.raw High cLAENAGDVAFVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.65 0.00 0 5 25 2 697.33984 1393.67241 -4.09 30.74 3633 3633 MS2 20/24 Linfeng_091311_rIgG_10.raw High VVWcAVGEQELR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.52 0.00 0 15 25 2 723.36212 1445.71697 -2.54 33.46 3995 3995 MS2 18/22 Linfeng_091311_rIgG_10.raw High GGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 398 2.51 0.00 0 24 25 2 695.86725 1390.72722 -3.85 35.77 4300 4300 MS2 16/24 Linfeng_091311_rIgG_10.raw High SDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 254 2.46 0.00 0 7 25 2 619.30457 1237.60185 -3.31 29.40 3451 3451 MS2 18/20 Linfeng_091311_rIgG_10.raw Medium DVTVLQNTDGNNNEAWAK Unambiguous 2 1 IPI00789477.1 CID 1.0000 0.0000 1 1 197 2.41 0.00 0 23 25 3 663.64502 1988.92051 -5.23 31.81 3778 3778 MS2 23/68 Linfeng_091311_rIgG_10.raw Medium RSDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 371 2.39 0.00 1 26 25 3 465.23816 1393.69992 -5.13 25.94 2968 2968 MS2 19/44 Linfeng_091311_rIgG_10.raw High EDAIWNLLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 401 2.29 0.00 0 37 25 2 565.30280 1129.59831 -1.57 43.57 5297 5297 MS2 15/16 Linfeng_091311_rIgG_10.raw High FQLFGSPSGQK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 323 2.29 0.00 0 4 16 2 598.30554 1195.60381 -5.72 33.73 4031 4031 MS2 15/20 Linfeng_091311_rIgG_10.raw High FFSAScVPGADK Unambiguous 5 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 2.20 0.00 0 4 25 2 643.29626 1285.58525 -2.30 29.21 3425 3425 MS2 19/22 Linfeng_091311_rIgG_10.raw IPI00789514.1 13 kDa protein 22.73 3 1 4 4 9.66 22.73 4 4 110 12.9 10.76 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HFNAPSHIR Unambiguous 3 1 IPI00789514.1 CID 1.0000 0.0000 1 1 434 2.86 0.00 0 23 25 3 360.18930 1078.55335 -0.72 17.72 1689 1689 MS2 22/32 Linfeng_091311_rIgG_9.raw High YVIYIER Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 204 2.40 0.00 0 11 25 2 478.26471 955.52214 -2.74 30.87 3512 3512 MS2 11/12 Linfeng_091311_rIgG_9.raw High KDDEVQVVR Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 464 2.34 0.00 1 41 25 2 544.28949 1087.57170 -2.36 18.13 1748 1748 MS2 14/16 Linfeng_091311_rIgG_9.raw High DDEVQVVR Unambiguous 4 2 IPI00007144.1;IPI00789514.1 CID 1.0000 0.0000 1 1 263 2.07 0.00 0 29 25 2 480.24133 959.47539 -4.08 22.10 2312 2312 MS2 13/14 Linfeng_091311_rIgG_9.raw IPI00790135.1 79 kDa protein 4.32 4 3 3 3 6.54 4.32 3 3 695 79.2 6.89 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FEEQGDFESEK Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 23 2.37 0.00 0 7 25 2 672.78113 1344.55498 -3.05 24.21 2641 2641 MS2 17/20 Linfeng_091311_rIgG_3.raw High YVLEEAQR Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 346 2.15 0.00 0 41 25 2 504.25931 1007.51134 -4.30 23.36 2522 2522 MS2 11/14 Linfeng_091311_rIgG_3.raw High VVLPTFILEPR Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 182 2.03 0.00 0 45 25 2 642.38861 1283.76995 -1.80 43.07 5110 5110 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00791325.1 Pumilio domain-containing protein KIAA0020 13.30 1 6 6 8 13.34 12.13 5 5 9.53 5.70 3 3 684 77.2 9.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAIILSSLLQScDLEVANK Unambiguous 1 1 IPI00791325.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 389 4.47 0.00 0 15 25 3 677.69958 2031.08420 2.48 42.96 4559 4559 MS2 33/72 Linfeng_122411_rIgG_4.raw High GAIILSSLLQScDLEVANK Unambiguous 1 1 IPI00791325.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 375 3.21 0.00 0 25 25 3 677.69690 2031.07614 -1.49 44.30 5259 5259 MS2 30/72 Linfeng_091311_rIgG_4.raw High VFLDFFTYAPPK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 396 3.02 0.00 0 8 25 2 722.87860 1444.74993 -0.86 45.98 5472 5472 MS2 19/22 Linfeng_091311_rIgG_4.raw High VFLDFFTYAPPK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 424 2.99 0.00 0 24 25 2 722.88220 1444.75713 4.12 44.62 4771 4771 MS2 18/22 Linfeng_122411_rIgG_4.raw High ELLESISPALLSYLQEHAQEVVLDK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 221 2.56 0.00 0 21 25 3 942.16998 2824.49540 -0.92 50.01 5981 5981 MS2 26/96 Linfeng_091311_rIgG_4.raw Medium QIIISEIISSLPSIVNDK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 136 2.30 0.00 0 6 25 3 657.04608 1969.12369 1.03 52.82 6302 6302 MS2 23/68 Linfeng_091311_rIgG_4.raw High VLLYLLSPR Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 75 2.25 0.00 0 49 25 2 537.33820 1073.66911 -2.48 40.52 4785 4785 MS2 14/16 Linfeng_091311_rIgG_4.raw High TNYDIVVR Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 393 2.07 0.00 0 50 25 2 490.26495 979.52263 1.92 23.30 2022 2022 MS2 11/14 Linfeng_122411_rIgG_4.raw IPI00791448.1 "cDNA FLJ51469, highly similar to 60S acidic ribosomal protein P0" 24.10 9 5 5 5 12.87 24.10 5 5 278 29.7 5.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGAIAPcEVTVPAQNTGLGPEK Unambiguous 9 1 IPI00791448.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.01 0.00 0 9 25 3 727.37030 2180.09635 -2.46 31.53 3603 3603 MS2 34/84 Linfeng_091311_rIgG_7.raw High GHLENNPALEK Unambiguous 9 1 IPI00791448.1 CID 1.0000 0.0000 1 1 329 2.53 0.00 0 18 25 2 611.31281 1221.61833 -3.23 18.25 1785 1785 MS2 16/20 Linfeng_091311_rIgG_7.raw High GTIEILSDVQLIK Unambiguous 3 1 IPI00791448.1 CID 1.0000 0.0000 1 1 254 2.49 0.00 0 30 25 2 714.91803 1428.82878 -1.48 42.37 4986 4986 MS2 17/24 Linfeng_091311_rIgG_7.raw High TSFFQALGITTK Unambiguous 8 1 IPI00791448.1 CID 1.0000 0.0000 1 1 324 2.47 0.00 0 3 25 2 657.35742 1313.70757 -1.88 42.97 5061 5061 MS2 19/22 Linfeng_091311_rIgG_7.raw High GNVGFVFTK Unambiguous 7 1 IPI00791448.1 CID 1.0000 0.0000 1 1 210 2.35 0.00 0 6 25 2 484.76212 968.51695 -3.19 32.21 3694 3694 MS2 14/16 Linfeng_091311_rIgG_7.raw IPI00792677.1 "cDNA FLJ60097, highly similar to Tubulin alpha-ubiquitous chain" 30.77 22 8 8 23 16.59 17.07 5 7 46.82 26.44 7 16 0.00 416 46.3 5.08 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TIGGGDDSFNTFFSETGAGK Unambiguous 13 1 IPI00792677.1 CID 1.0000 0.0000 1 1 86 3.61 0.00 0 21 13 3 669.96942 2007.89371 0.28 38.73 4236 4236 MS2 31/76 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 424 3.60 0.00 0 4 25 3 567.97504 1701.91056 2.75 40.92 3940 3940 MS2 31/56 Linfeng_122411_rIgG_9.raw High LISQIVSSITASLR Unambiguous 14 1 IPI00792677.1 CID 1.0000 0.0000 1 1 136 3.54 0.00 0 0 25 3 496.63129 1487.87931 0.05 46.84 5316 5316 MS2 31/52 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 391 3.46 0.00 0 22 25 2 851.45856 1701.90984 2.33 40.81 4161 4161 MS2 20/28 Linfeng_122411_rIgG_3.raw High QLFHPEQLITGKEDAANNYAR Unambiguous 19 1 IPI00792677.1 CID 1.0000 0.0000 1 1 372 3.42 0.00 1 35 12 4 604.55652 2415.20424 -0.41 31.53 3244 3244 MS2 32/120 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 455 3.24 0.00 0 11 9 3 567.97351 1701.90598 0.06 40.76 4514 4514 MS2 31/56 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 422 3.03 0.00 0 20 25 3 567.97449 1701.90891 1.78 40.80 4160 4160 MS2 28/56 Linfeng_122411_rIgG_3.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 401 2.88 0.00 0 5 25 2 851.45929 1701.91130 3.19 40.91 3939 3939 MS2 21/28 Linfeng_122411_rIgG_9.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 463 2.76 0.00 0 4 9 2 508.29224 1015.57720 -1.08 27.60 2702 2702 MS2 16/18 Linfeng_122411_rIgG_5.raw High VGINYQPPTVVPGGDLAK Unambiguous 18 1 IPI00792677.1 CID 1.0000 0.0000 1 1 293 2.72 0.00 0 19 25 2 912.99396 1824.98064 -2.67 34.68 3979 3979 MS2 11/34 Linfeng_091311_rIgG_5.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 651 2.72 0.00 0 12 25 2 508.29370 1015.58013 1.81 28.81 2816 2816 MS2 16/18 Linfeng_122411_rIgG_6.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 670 2.53 0.00 0 32 25 2 508.29346 1015.57964 1.33 27.99 2505 2505 MS2 15/18 Linfeng_122411_rIgG_3.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 710 2.51 0.00 0 39 25 2 508.29416 1015.58104 2.71 25.51 1972 1972 MS2 16/18 Linfeng_122411_rIgG_9.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 513 2.49 0.00 0 17 25 2 508.29117 1015.57506 -3.18 30.15 3382 3382 MS2 14/18 Linfeng_091311_rIgG_5.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 628 2.46 0.00 0 21 25 2 508.29340 1015.57952 1.21 28.21 2679 2679 MS2 16/18 Linfeng_122411_rIgG_4.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 464 2.43 0.00 0 23 25 2 508.29147 1015.57567 -2.58 30.18 3439 3439 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium IHFPLATYAPVISAEK Unambiguous 16 1 IPI00792677.1 CID 1.0000 0.0000 1 1 303 2.38 0.00 0 18 18 3 586.32574 1756.96268 -0.35 36.66 3948 3948 MS2 27/60 Linfeng_122411_rIgG_5.raw Medium AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00792677.1 CID 1.0000 0.0000 1 1 485 2.35 0.00 0 11 25 3 567.97180 1701.90085 -2.95 41.98 4925 4925 MS2 25/56 Linfeng_091311_rIgG_5.raw High DVNAAIATIK Unambiguous 11 1 IPI00792677.1 CID 1.0000 0.0000 1 1 684 2.35 0.00 0 47 25 2 508.29346 1015.57964 1.33 25.84 2086 2086 MS2 14/18 Linfeng_122411_rIgG_10.raw Medium NLDIERPTYTNLNR Unambiguous 19 1 IPI00792677.1 CID 1.0000 0.0000 1 1 474 2.33 0.00 0 10 25 3 573.63049 1718.87693 -3.00 29.26 3298 3298 MS2 20/52 Linfeng_091311_rIgG_7.raw Medium NLDIERPTYTNLNR Unambiguous 19 1 IPI00792677.1 CID 1.0000 0.0000 1 1 462 2.33 0.00 0 19 25 3 573.63232 1718.88242 0.20 26.27 2522 2522 MS2 23/52 Linfeng_122411_rIgG_5.raw High LISQIVSSITASLR Unambiguous 14 1 IPI00792677.1 CID 1.0000 0.0000 1 1 121 2.24 0.00 0 24 25 2 744.44269 1487.87810 -0.76 48.35 5733 5733 MS2 19/26 Linfeng_091311_rIgG_5.raw High LISQIVSSITASLR Unambiguous 14 1 IPI00792677.1 CID 1.0000 0.0000 1 1 147 2.02 0.00 0 33 25 2 744.44342 1487.87956 0.22 48.48 5751 5751 MS2 18/26 Linfeng_091311_rIgG_7.raw IPI00793641.1 "cDNA FLJ50908, highly similar to Homo sapiens keratin protein K6irs (K6IRS2), mRNA" 18.09 4 1 8 79 51.00 9.05 4 18 64.89 7.29 4 24 114.03 9.55 3 37 398 44.7 5.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.86 0.00 0 22 25 2 738.88586 1476.76445 -3.31 28.46 3190 3190 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.73 0.00 0 41 25 2 738.88519 1476.76311 -4.22 28.32 3190 3190 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.71 0.00 0 24 25 2 738.88623 1476.76518 -2.81 28.18 3182 3182 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 406 3.67 0.00 0 61 100 2 738.89166 1476.77605 4.54 28.98 2459 2459 MS2 20/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.64 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.21 3229 3229 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.56 0.00 0 59 100 2 738.89111 1476.77495 3.80 28.85 2618 2618 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.55 0.00 0 49 50 2 738.89130 1476.77532 4.05 28.86 2826 2826 MS2 20/22 Linfeng_20120125_PCAF_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.52 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.30 2931 2931 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.50 0.00 0 35 25 2 738.88617 1476.76506 -2.90 28.43 3152 3152 MS2 20/22 Linfeng_091311_rIgG_5.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 324 3.50 0.00 1 18 100 2 847.92865 1694.85002 4.80 33.01 3052 3052 MS2 17/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.50 0.00 0 61 100 2 738.89117 1476.77507 3.88 27.60 2631 2631 MS2 20/22 Linfeng_20120125_PCAF_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.49 0.00 0 30 25 2 738.88593 1476.76457 -3.23 28.38 3177 3177 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 423 3.41 0.00 0 31 100 2 738.89325 1476.77922 6.69 28.23 2527 2527 MS2 19/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 425 3.40 0.00 0 52 100 2 738.89252 1476.77776 5.70 28.45 2265 2265 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.37 0.00 0 34 25 2 738.88947 1476.77165 1.57 24.07 2225 2225 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 402 3.36 0.00 0 38 100 2 738.89246 1476.77764 5.62 29.50 2738 2738 MS2 20/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 416 3.36 0.00 0 45 100 2 738.89203 1476.77678 5.04 28.13 2507 2507 MS2 20/22 Linfeng_20120125_PCAF_10.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 3.34 0.00 1 11 100 2 847.92889 1694.85051 5.09 33.07 3067 3067 MS2 18/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 404 3.34 0.00 0 53 100 2 738.89142 1476.77556 4.21 28.29 2241 2241 MS2 19/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 455 3.32 0.00 0 7 25 2 738.88947 1476.77165 1.57 23.02 2088 2088 MS2 18/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.32 0.00 0 13 100 2 738.89355 1476.77983 7.10 29.23 2695 2695 MS2 20/22 Linfeng_20120125_PCAF_10.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 3.31 0.00 1 19 100 2 847.93024 1694.85320 6.68 32.67 3111 3111 MS2 20/28 Linfeng_20120125_PCAF_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 3.27 0.00 1 6 100 2 847.92853 1694.84978 4.66 32.80 3003 3003 MS2 20/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 430 3.26 0.00 0 37 100 2 738.89191 1476.77654 4.87 29.41 2406 2406 MS2 20/22 Linfeng_20120125_PCAF_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 445 3.25 0.00 0 13 25 2 738.88959 1476.77190 1.73 27.08 2585 2585 MS2 20/22 Linfeng_122411_rIgG_6.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 311 3.25 0.00 1 16 100 2 847.92816 1694.84905 4.23 32.84 3012 3012 MS2 19/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 3.24 0.00 0 36 100 2 738.89313 1476.77898 6.53 29.48 2718 2718 MS2 19/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.18 0.00 0 14 25 2 738.89020 1476.77312 2.56 25.27 2170 2170 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.15 0.00 0 18 25 2 738.89014 1476.77300 2.48 25.89 2370 2370 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.14 0.00 0 23 100 2 738.89264 1476.77800 5.86 30.74 2590 2590 MS2 19/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.14 0.00 0 23 25 2 738.89056 1476.77385 3.05 24.49 2041 2041 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 405 3.14 0.00 0 15 100 2 738.89362 1476.77995 7.19 29.32 3040 3040 MS2 20/22 Linfeng_20120125_PCAF_8.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 3.14 0.00 1 11 100 2 847.92828 1694.84929 4.37 32.76 2992 2992 MS2 20/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 3.13 0.00 0 38 100 2 738.89282 1476.77837 6.11 28.29 2792 2792 MS2 19/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.12 0.00 0 27 100 2 738.89349 1476.77971 7.02 30.63 2722 2722 MS2 18/22 Linfeng_20120125_PCAF_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 444 3.08 0.00 0 14 25 2 738.88922 1476.77117 1.24 26.28 2306 2306 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.07 0.00 0 52 100 2 738.89197 1476.77666 4.96 29.59 2736 2736 MS2 20/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.04 0.00 0 52 25 2 738.88947 1476.77165 1.57 24.24 2038 2038 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.02 0.00 0 3 25 2 738.88605 1476.76482 -3.06 29.62 3110 3110 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.99 0.00 0 9 25 2 738.89032 1476.77336 2.72 25.89 2226 2226 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 406 2.97 0.00 0 17 100 2 738.89307 1476.77886 6.44 29.43 3068 3068 MS2 19/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 380 2.93 0.00 0 50 100 2 738.89185 1476.77641 4.79 29.62 2570 2570 MS2 20/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.93 0.00 0 33 100 2 738.89288 1476.77849 6.20 29.56 2562 2562 MS2 19/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.92 0.00 0 7 25 2 738.88977 1476.77226 1.98 27.13 2535 2535 MS2 17/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 428 2.89 0.00 0 38 100 2 738.89294 1476.77861 6.28 28.13 2757 2757 MS2 20/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 39 25 2 738.88611 1476.76494 -2.98 29.46 3399 3399 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 472 2.85 0.00 0 15 25 2 738.88654 1476.76579 -2.40 29.49 3358 3358 MS2 19/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.84 0.00 0 17 25 2 738.89008 1476.77287 2.39 27.61 2484 2484 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.83 0.00 0 22 100 2 738.89215 1476.77703 5.20 30.26 3249 3249 MS2 19/22 Linfeng_20120125_PCAF_5.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.80 0.00 1 10 100 2 847.92792 1694.84856 3.94 32.88 3022 3022 MS2 19/28 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.78 0.00 0 32 25 2 738.88861 1476.76995 0.41 26.06 2493 2493 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 2.75 0.00 0 54 100 2 738.89185 1476.77641 4.79 30.82 2981 2981 MS2 18/22 Linfeng_20120125_PCAF_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.74 0.00 0 23 100 2 738.89276 1476.77825 6.03 30.57 2751 2751 MS2 16/22 Linfeng_20120125_PCAF_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.70 0.00 0 48 100 2 738.89264 1476.77800 5.86 30.34 2878 2878 MS2 14/22 Linfeng_20120125_PCAF_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 424 2.69 0.00 0 19 100 2 738.89319 1476.77910 6.61 30.69 2581 2581 MS2 18/22 Linfeng_20120125_PCAF_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 478 2.65 0.00 0 44 25 3 492.92874 1476.77167 1.58 24.37 2055 2055 MS2 21/44 Linfeng_122411_rIgG_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.49 0.00 0 31 100 2 738.89374 1476.78020 7.35 30.51 3329 3329 MS2 17/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.47 0.00 0 15 25 2 738.89001 1476.77275 2.31 28.54 2780 2780 MS2 16/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 395 2.42 0.00 0 49 100 2 738.89209 1476.77690 5.12 30.66 2744 2744 MS2 19/22 Linfeng_20120125_PCAF_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 426 2.36 0.00 0 38 100 2 738.89325 1476.77922 6.69 30.64 3360 3360 MS2 18/22 Linfeng_20120125_PCAF_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 448 2.34 0.00 0 10 25 2 738.88995 1476.77263 2.23 27.68 2464 2464 MS2 18/22 Linfeng_122411_rIgG_3.raw High LLESEEcR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.33 0.00 0 37 25 2 518.23932 1035.47136 -6.01 19.84 1993 1993 MS2 12/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High AQYEEIALK Unambiguous 4 1 IPI00793641.1 CID 1.0000 0.0000 1 1 264 2.19 0.00 0 28 25 2 532.78320 1064.55913 -2.97 27.86 3108 3108 MS2 13/16 Linfeng_091311_rIgG_9.raw High LALDMEIATYR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 345 2.16 0.00 0 8 100 2 648.34082 1295.67436 6.10 45.58 6840 6840 MS2 16/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00795527.1 21 kDa protein 38.92 22 3 3 12 0.00 40.12 38.92 3 12 0.00 185 20.8 7.40 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 332 4.20 0.00 0 5 25 2 894.46973 1787.93218 2.68 33.50 3369 3369 MS2 24/30 Linfeng_122411_rIgG_4.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 324 4.16 0.00 0 0 25 2 894.46918 1787.93108 2.07 33.74 3454 3454 MS2 24/30 Linfeng_122411_rIgG_6.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 376 4.05 0.00 0 3 3 3 596.64728 1787.92728 -0.06 33.63 3175 3175 MS2 32/60 Linfeng_122411_rIgG_8.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 331 3.74 0.00 0 2 3 2 894.46735 1787.92742 0.02 33.62 3173 3173 MS2 25/30 Linfeng_122411_rIgG_8.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 327 3.60 0.00 0 2 25 2 894.46912 1787.93096 2.00 33.47 3250 3250 MS2 24/30 Linfeng_122411_rIgG_2.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 313 3.58 0.00 0 10 25 2 894.47003 1787.93279 3.02 33.50 3010 3010 MS2 23/30 Linfeng_122411_rIgG_9.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 315 3.56 0.00 0 3 25 2 894.46930 1787.93132 2.20 33.49 3224 3224 MS2 23/30 Linfeng_122411_rIgG_3.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 327 3.30 0.00 0 7 25 2 894.46790 1787.92851 0.63 33.53 3109 3109 MS2 23/30 Linfeng_122411_rIgG_10.raw High TITLEVEPSDTIENVK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 359 3.27 0.00 0 21 25 3 596.64868 1787.93149 2.30 33.50 3225 3225 MS2 27/60 Linfeng_122411_rIgG_3.raw High ESTLHLVLR Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 236 2.35 0.00 0 24 25 2 534.31512 1067.62297 2.02 27.01 2404 2404 MS2 12/16 Linfeng_122411_rIgG_2.raw Medium TITLEVEPSDTIENVKAK Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 343 2.26 0.00 1 7 25 3 663.02625 1987.06418 2.37 30.71 2895 2895 MS2 28/68 Linfeng_122411_rIgG_2.raw High ESTLHLVLR Unambiguous 22 1 IPI00795527.1 CID 1.0000 0.0000 1 1 231 2.07 0.00 0 23 25 2 534.31543 1067.62358 2.60 24.29 1975 1975 MS2 12/16 Linfeng_122411_rIgG_8.raw IPI00797788.1 12 kDa protein 51.96 5 4 4 4 9.36 51.96 4 4 102 11.8 5.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High cLVFSLIGLHFK Unambiguous 5 1 IPI00797788.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 313 2.64 0.00 0 3 25 3 478.60287 1433.79407 -2.33 44.62 5429 5429 MS2 26/44 Linfeng_091311_rIgG_10.raw Medium IIDDSEITKEDDALWPPPDR Unambiguous 3 1 IPI00797788.1 CID 1.0000 0.0000 1 1 294 2.37 0.00 1 4 14 3 775.70996 2325.11533 -4.00 36.35 4376 4376 MS2 21/76 Linfeng_091311_rIgG_10.raw High VFYYLVQDLK Unambiguous 5 1 IPI00797788.1 CID 1.0000 0.0000 1 1 492 2.24 0.00 0 13 25 2 644.35156 1287.69585 -1.97 39.43 4771 4771 MS2 16/18 Linfeng_091311_rIgG_10.raw High IGSLIDVNQSK Unambiguous 5 1 IPI00797788.1 CID 1.0000 0.0000 1 1 472 2.11 0.00 0 6 17 2 587.32343 1173.63957 -6.69 28.74 3359 3359 MS2 18/20 Linfeng_091311_rIgG_10.raw IPI00844578.1 ATP-dependent RNA helicase A 34.33 1 41 41 147 239.66 28.90 32 81 161.98 28.19 30 50 45.59 11.97 10 16 1270 140.9 6.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.98 0.00 1 0 25 3 1015.72723 3045.16715 2.54 29.32 2681 2681 MS2 45/104 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 362 5.52 0.00 0 8 25 3 684.01532 2050.03141 3.57 44.91 4693 4693 MS2 33/64 Linfeng_122411_rIgG_3.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.46 0.00 1 3 25 3 1015.72156 3045.15012 -3.05 30.21 3463 3463 MS2 44/104 Linfeng_091311_rIgG_3.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.27 0.00 1 3 25 3 1015.72144 3045.14975 -3.17 30.39 3526 3526 MS2 43/104 Linfeng_091311_rIgG_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 5 5.23 0.00 1 2 100 3 1015.73224 3045.18216 7.47 30.32 2686 2686 MS2 40/104 Linfeng_20120125_PCAF_2.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 340 4.66 0.00 0 34 25 3 684.01227 2050.02225 -0.89 45.98 5545 5545 MS2 32/64 Linfeng_091311_rIgG_2.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 331 4.58 0.00 0 12 25 3 684.01196 2050.02134 -1.34 46.18 5497 5497 MS2 30/64 Linfeng_091311_rIgG_4.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 331 4.53 0.00 0 23 25 3 684.01410 2050.02774 1.79 44.85 4800 4800 MS2 33/64 Linfeng_122411_rIgG_4.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 330 4.50 0.00 0 10 25 3 684.01202 2050.02152 -1.25 46.03 5481 5481 MS2 33/64 Linfeng_091311_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 305 4.45 0.00 0 3 25 2 1025.51855 2050.02983 2.81 45.00 4704 4704 MS2 23/32 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 312 4.38 0.00 0 24 25 3 683.03955 2047.10410 -1.46 48.02 5804 5804 MS2 34/68 Linfeng_091311_rIgG_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 84 4.37 0.00 0 4 24 2 1081.98596 2162.96465 -4.26 32.42 3795 3795 MS2 24/40 Linfeng_091311_rIgG_2.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 4.34 0.00 0 5 25 3 683.04254 2047.11307 2.92 46.97 4958 4958 MS2 31/68 Linfeng_122411_rIgG_3.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 85 4.32 0.00 0 2 25 2 1081.99255 2162.97783 1.84 31.29 2940 2940 MS2 25/40 Linfeng_122411_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 361 4.31 0.00 0 14 25 3 581.29260 1741.86325 1.65 36.37 3590 3590 MS2 37/60 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 277 4.30 0.00 0 11 25 2 1025.51501 2050.02275 -0.65 46.12 5492 5492 MS2 23/32 Linfeng_091311_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 4.18 0.00 1 15 25 3 725.73749 2175.19791 -1.91 44.83 5331 5331 MS2 34/72 Linfeng_091311_rIgG_3.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 343 4.12 0.00 0 3 25 3 693.01178 2077.02079 3.33 46.00 4834 4834 MS2 28/68 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 282 4.09 0.00 0 11 25 2 1025.51489 2050.02251 -0.77 46.03 5551 5551 MS2 23/32 Linfeng_091311_rIgG_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 351 4.05 0.00 0 10 25 3 693.01135 2077.01950 2.72 46.08 4848 4848 MS2 27/68 Linfeng_122411_rIgG_2.raw High TTQVPQFILDDFIQNDRAAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 247 4.05 0.00 1 11 25 4 847.93207 3388.70644 3.21 43.97 4572 4572 MS2 34/168 Linfeng_122411_rIgG_3.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 367 3.91 0.00 0 8 25 3 693.01202 2077.02152 3.69 45.79 4918 4918 MS2 28/68 Linfeng_122411_rIgG_4.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 319 3.89 0.00 0 22 25 3 693.00885 2077.01200 -0.90 46.82 5580 5580 MS2 28/68 Linfeng_091311_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 229 3.81 0.00 1 9 25 3 725.73657 2175.19516 -3.17 44.87 5403 5403 MS2 32/72 Linfeng_091311_rIgG_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 5 3.81 0.00 1 3 100 3 1015.73206 3045.18161 7.29 30.80 2772 2772 MS2 39/104 Linfeng_20120125_PCAF_2.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 173 3.72 0.00 0 5 25 3 407.91217 1221.72196 1.44 29.93 2793 2793 MS2 26/40 Linfeng_122411_rIgG_2.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 3.69 0.00 1 12 25 3 725.73712 2175.19681 -2.41 44.95 5342 5342 MS2 32/72 Linfeng_091311_rIgG_4.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 173 3.67 0.00 0 4 9 3 407.91232 1221.72242 1.81 29.89 2756 2756 MS2 29/40 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 430 3.65 0.00 0 24 25 3 501.93399 1503.78742 -2.70 27.71 3160 3160 MS2 30/48 Linfeng_091311_rIgG_2.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 198 3.63 0.00 1 12 25 3 725.74115 2175.20890 3.14 44.15 4594 4594 MS2 31/72 Linfeng_122411_rIgG_3.raw High GMTLVTPLQLLLFASK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 92 3.55 0.00 0 34 25 3 578.00946 1732.01383 3.46 54.30 5857 5857 MS2 27/60 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 3.55 0.00 0 22 25 3 683.04248 2047.11289 2.83 46.73 5036 5036 MS2 31/68 Linfeng_122411_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 3.54 0.00 0 8 23 3 547.29199 1639.86142 1.77 29.50 2704 2704 MS2 32/56 Linfeng_122411_rIgG_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 250 3.51 0.00 0 22 25 3 473.27457 1417.80915 2.92 51.30 5505 5505 MS2 26/44 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 306 3.50 0.00 0 22 25 3 683.04034 2047.10648 -0.30 47.92 5718 5718 MS2 30/68 Linfeng_091311_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 266 3.49 0.00 0 11 11 2 871.43024 1741.85320 -4.12 37.45 4453 4453 MS2 21/30 Linfeng_091311_rIgG_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 296 3.47 0.00 0 46 25 3 693.00732 2077.00742 -3.10 47.13 5579 5579 MS2 27/68 Linfeng_091311_rIgG_5.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 443 3.46 0.00 0 40 25 3 501.93445 1503.78879 -1.79 27.64 3114 3114 MS2 28/48 Linfeng_091311_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 190 3.46 0.00 0 13 25 3 407.91025 1221.71619 -3.28 31.00 3606 3606 MS2 27/40 Linfeng_091311_rIgG_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 311 3.45 0.00 0 36 25 3 693.00922 2077.01310 -0.37 46.94 5592 5592 MS2 27/68 Linfeng_091311_rIgG_4.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 3.42 0.00 0 21 25 2 1025.51501 2050.02275 -0.65 46.24 5504 5504 MS2 22/32 Linfeng_091311_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.41 0.00 0 23 25 3 547.28955 1639.85410 -2.70 30.38 3486 3486 MS2 28/56 Linfeng_091311_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 469 3.36 0.00 0 40 25 3 501.93652 1503.79502 2.35 26.01 2243 2243 MS2 26/48 Linfeng_122411_rIgG_3.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 392 3.34 0.00 0 20 25 2 857.95636 1714.90544 2.53 40.77 4156 4156 MS2 22/28 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 157 3.33 0.00 0 9 25 3 407.91248 1221.72287 2.19 29.93 2907 2907 MS2 26/40 Linfeng_122411_rIgG_4.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 428 3.28 0.00 0 19 25 3 572.30444 1714.89878 -1.36 41.74 5006 5006 MS2 26/56 Linfeng_091311_rIgG_2.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 3.27 0.00 0 9 21 3 547.28937 1639.85355 -3.03 30.46 3535 3535 MS2 30/56 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 428 3.26 0.00 0 24 25 3 593.32037 1777.94657 -1.01 34.23 3318 3318 MS2 27/60 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 311 3.22 0.00 0 66 25 3 683.03986 2047.10501 -1.01 48.12 5742 5742 MS2 32/68 Linfeng_091311_rIgG_4.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 298 3.22 0.00 0 54 25 3 693.00763 2077.00833 -2.66 46.79 5648 5648 MS2 27/68 Linfeng_091311_rIgG_2.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 424 3.20 0.00 0 34 25 3 572.30676 1714.90573 2.70 40.78 4157 4157 MS2 27/56 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 459 3.19 0.00 0 48 25 3 501.93411 1503.78778 -2.46 27.78 3127 3127 MS2 25/48 Linfeng_091311_rIgG_4.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 3.16 0.00 0 1 20 2 679.34595 1357.68462 -3.47 24.33 2692 2692 MS2 18/22 Linfeng_091311_rIgG_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 413 3.15 0.00 0 23 25 2 644.85706 1288.70683 2.01 30.10 2785 2785 MS2 20/22 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 428 3.11 0.00 0 19 25 3 453.23288 1357.68409 -3.86 24.44 2708 2708 MS2 23/44 Linfeng_091311_rIgG_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 121 3.10 0.00 0 0 100 2 1081.99878 2162.99028 7.60 35.45 3654 3654 MS2 23/40 Linfeng_20120125_PCAF_2.raw High VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 243 3.09 0.00 0 24 25 4 384.68869 1535.73293 -1.93 28.62 3248 3248 MS2 28/66 Linfeng_091311_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 184 3.09 0.00 1 14 25 3 725.74231 2175.21238 4.74 44.00 4692 4692 MS2 26/72 Linfeng_122411_rIgG_4.raw High GMTLVTPLQLLLFASK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 77 3.07 0.00 0 18 25 2 866.51025 1732.01323 3.12 54.25 5851 5851 MS2 21/30 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 3.06 0.00 0 1 12 2 679.34772 1357.68816 -0.86 3.69 376 376 MS2 18/22 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 440 3.04 0.00 0 31 25 3 501.93680 1503.79584 2.90 24.87 2092 2092 MS2 27/48 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 460 3.03 0.00 0 22 100 3 501.93893 1503.80225 7.16 41.79 4862 4862 MS2 25/48 Linfeng_20120125_PCAF_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 3.00 0.00 0 11 24 2 644.85425 1288.70122 -2.35 31.53 3677 3677 MS2 20/22 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 432 2.99 0.00 0 34 25 3 593.31781 1777.93888 -5.33 34.95 4082 4082 MS2 29/60 Linfeng_091311_rIgG_3.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 2.99 0.00 0 19 25 3 547.28961 1639.85428 -2.59 30.51 3496 3496 MS2 27/56 Linfeng_091311_rIgG_4.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 118 2.99 0.00 0 3 25 3 721.66418 2162.97800 1.92 31.17 2925 2925 MS2 37/80 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 194 2.98 0.00 0 13 25 3 407.91043 1221.71674 -2.83 31.10 3573 3573 MS2 24/40 Linfeng_091311_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 2.98 0.00 0 17 100 2 820.43909 1639.87090 7.54 39.40 4409 4409 MS2 17/28 Linfeng_20120125_PCAF_2.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 368 2.93 0.00 0 10 100 3 547.29437 1639.86856 6.12 39.37 4402 4402 MS2 29/56 Linfeng_20120125_PCAF_2.raw High KLAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 2.92 0.00 1 40 25 3 472.93903 1416.80252 2.34 25.37 2158 2158 MS2 27/48 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 195 2.90 0.00 0 15 20 3 407.91055 1221.71711 -2.53 31.05 3574 3574 MS2 28/40 Linfeng_091311_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 282 2.90 0.00 0 28 25 2 871.43170 1741.85613 -2.44 37.39 4395 4395 MS2 21/30 Linfeng_091311_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 300 2.87 0.00 0 22 25 2 871.43146 1741.85564 -2.72 37.53 4406 4406 MS2 21/30 Linfeng_091311_rIgG_4.raw Medium VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 2.86 0.00 0 30 25 4 384.69016 1535.73879 1.88 27.56 2449 2449 MS2 29/66 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 323 2.85 0.00 0 4 25 2 679.34631 1357.68535 -2.93 24.35 2661 2661 MS2 18/22 Linfeng_091311_rIgG_3.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 358 2.85 0.00 0 14 100 3 547.29474 1639.86966 6.79 39.33 4394 4394 MS2 24/56 Linfeng_20120125_PCAF_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 99 2.84 0.00 0 10 19 3 721.65918 2162.96299 -5.02 32.41 3794 3794 MS2 34/80 Linfeng_091311_rIgG_2.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 584 2.82 0.00 0 18 25 2 588.30853 1175.60979 3.60 21.35 1685 1685 MS2 15/18 Linfeng_122411_rIgG_3.raw High QPAIISQLDPVNER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 278 2.81 0.00 0 3 100 2 790.43127 1579.85527 7.18 41.41 4790 4790 MS2 15/26 Linfeng_20120125_PCAF_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 492 2.81 0.00 0 3 25 2 644.85394 1288.70061 -2.82 31.57 3643 3643 MS2 18/22 Linfeng_091311_rIgG_3.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 580 2.75 0.00 1 13 25 2 544.31329 1087.61931 -2.37 19.91 2071 2071 MS2 18/18 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 439 2.74 0.00 0 23 11 3 593.31799 1777.93943 -5.03 35.00 4133 4133 MS2 28/60 Linfeng_091311_rIgG_2.raw High KKEGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 385 2.73 0.00 2 43 25 3 436.56525 1307.68119 -2.31 14.42 1298 1298 MS2 21/40 Linfeng_091311_rIgG_2.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 591 2.73 0.00 1 40 25 2 544.31366 1087.62004 -1.70 19.90 2045 2045 MS2 16/18 Linfeng_091311_rIgG_3.raw High QPAIISQLDPVNER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 337 2.67 0.00 0 10 25 2 790.42725 1579.84722 2.09 33.65 3244 3244 MS2 17/26 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 467 2.67 0.00 0 27 25 3 430.23987 1288.70505 0.63 30.21 2799 2799 MS2 24/44 Linfeng_122411_rIgG_3.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 602 2.66 0.00 0 16 25 2 588.30823 1175.60918 3.08 20.34 1591 1591 MS2 15/18 Linfeng_122411_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 323 2.66 0.00 0 7 25 2 701.89709 1402.78691 2.87 55.55 5993 5993 MS2 17/22 Linfeng_122411_rIgG_3.raw Medium VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 2.63 0.00 0 29 25 4 384.68829 1535.73134 -2.97 28.57 3278 3278 MS2 33/66 Linfeng_091311_rIgG_2.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 309 2.63 0.00 0 10 25 2 679.34662 1357.68596 -2.48 24.38 2659 2659 MS2 18/22 Linfeng_091311_rIgG_4.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 587 2.62 0.00 0 32 25 2 588.30853 1175.60979 3.60 19.32 1500 1500 MS2 14/18 Linfeng_122411_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 238 2.62 0.00 1 18 25 3 725.73682 2175.19590 -2.83 45.18 5344 5344 MS2 27/72 Linfeng_091311_rIgG_6.raw High GANLKDYYSR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 305 2.61 0.00 1 7 3 3 396.20013 1186.58585 0.60 3.32 317 317 MS2 23/36 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 447 2.61 0.00 0 26 100 3 501.93912 1503.80280 7.53 42.09 5056 5056 MS2 26/48 Linfeng_20120125_PCAF_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 340 2.59 0.00 0 41 25 3 473.27249 1417.80292 -1.47 52.75 6385 6385 MS2 20/44 Linfeng_091311_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 265 2.57 0.00 0 5 16 2 502.30115 1003.59502 1.46 34.11 3302 3302 MS2 17/18 Linfeng_122411_rIgG_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 255 2.56 0.00 0 52 25 3 473.27344 1417.80576 0.53 52.94 6315 6315 MS2 19/44 Linfeng_091311_rIgG_4.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 631 2.56 0.00 0 23 25 2 466.26227 931.51726 -3.77 22.59 2446 2446 MS2 15/16 Linfeng_091311_rIgG_2.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 585 2.55 0.00 1 22 25 2 544.31323 1087.61919 -2.49 20.00 2048 2048 MS2 14/18 Linfeng_091311_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.54 0.00 0 19 100 3 547.29474 1639.86966 6.79 39.57 4490 4490 MS2 23/56 Linfeng_20120125_PCAF_3.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 287 2.53 0.00 0 33 25 2 513.27576 1025.54424 2.68 36.81 3645 3645 MS2 13/14 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 487 2.52 0.00 0 15 25 2 644.85400 1288.70073 -2.73 31.62 3640 3640 MS2 19/22 Linfeng_091311_rIgG_4.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 245 2.50 0.00 0 22 25 2 709.40649 1417.80571 0.49 52.70 6274 6274 MS2 16/22 Linfeng_091311_rIgG_3.raw High YQILPLHSQIPR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 204 2.49 0.00 0 17 100 2 732.92499 1464.84270 7.17 41.77 4859 4859 MS2 15/22 Linfeng_20120125_PCAF_2.raw Medium GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 459 2.49 0.00 0 33 100 3 501.93939 1503.80362 8.07 42.63 5498 5498 MS2 20/48 Linfeng_20120125_PCAF_4.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 503 2.45 0.00 0 21 25 2 588.30493 1175.60259 -2.53 27.34 3073 3073 MS2 15/18 Linfeng_091311_rIgG_3.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 500 2.45 0.00 0 18 25 2 588.30493 1175.60259 -2.53 27.35 3111 3111 MS2 14/18 Linfeng_091311_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 281 2.41 0.00 0 12 25 2 502.29813 1003.58898 -4.56 35.23 4163 4163 MS2 17/18 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 2.40 0.00 0 37 25 2 709.40894 1417.81059 3.94 51.26 5499 5499 MS2 17/22 Linfeng_122411_rIgG_3.raw Medium KVQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 356 2.40 0.00 1 10 25 3 615.00452 1842.99900 1.58 36.98 3667 3667 MS2 28/60 Linfeng_122411_rIgG_3.raw Medium LETHMTPEMFR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 278 2.39 0.00 0 33 100 3 464.55603 1391.65354 6.36 36.88 3927 3927 MS2 19/40 Linfeng_20120125_PCAF_2.raw High YTQVGPDHNR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 115 2.39 0.00 0 67 25 2 593.78259 1186.55791 -1.75 15.00 1379 1379 MS2 15/18 Linfeng_091311_rIgG_2.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 401 2.37 0.00 0 9 25 2 579.33264 1157.65801 1.26 30.78 2873 2873 MS2 16/20 Linfeng_122411_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 339 2.36 0.00 0 23 25 2 701.89825 1402.78923 4.53 55.02 6520 6520 MS2 16/22 Linfeng_091311_rIgG_4.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 317 2.36 0.00 0 11 25 2 701.89709 1402.78691 2.87 55.02 6524 6524 MS2 16/22 Linfeng_091311_rIgG_5.raw High NFLYAWcGK Unambiguous 1 1 IPI00844578.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 140 2.35 0.00 0 15 25 2 579.77417 1158.54106 0.82 35.77 3514 3514 MS2 14/16 Linfeng_122411_rIgG_3.raw High KVFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 302 2.35 0.00 1 40 25 2 643.37720 1285.74712 -3.42 28.53 3272 3272 MS2 16/22 Linfeng_091311_rIgG_2.raw High QPAIISQLDPVNER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 336 2.34 0.00 0 29 24 2 790.42242 1579.83757 -4.02 34.70 4095 4095 MS2 18/26 Linfeng_091311_rIgG_2.raw Medium VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 2.33 0.00 0 37 25 3 512.58191 1535.73117 -3.08 28.61 3284 3284 MS2 26/44 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 228 2.33 0.00 0 28 25 2 709.40869 1417.81011 3.59 51.43 5521 5521 MS2 16/22 Linfeng_122411_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 222 2.32 0.00 0 5 25 2 709.40918 1417.81108 4.28 51.30 5575 5575 MS2 16/22 Linfeng_122411_rIgG_4.raw High LAQFEPSQR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 556 2.31 0.00 0 13 2 2 538.27979 1075.55229 -0.78 3.57 357 357 MS2 15/16 Linfeng_122411_rIgG_3.raw High YPSPFFVFGEK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 310 2.28 0.00 0 18 25 2 659.32800 1317.64873 -2.07 42.71 5064 5064 MS2 14/20 Linfeng_091311_rIgG_3.raw Medium RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 592 2.28 0.00 1 42 25 3 363.21143 1087.61972 -1.99 19.96 2053 2053 MS2 18/36 Linfeng_091311_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 304 2.26 0.00 0 38 25 2 701.89679 1402.78630 2.44 54.94 6617 6617 MS2 16/22 Linfeng_091311_rIgG_2.raw High MGGEEAEIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 144 2.25 0.00 0 43 25 2 496.22800 991.44872 -2.70 20.25 2119 2119 MS2 14/16 Linfeng_091311_rIgG_2.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 311 2.22 0.00 0 4 100 2 871.43774 1741.86821 4.50 43.41 5216 5216 MS2 22/30 Linfeng_20120125_PCAF_2.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 310 2.20 0.00 0 16 25 2 513.27551 1025.54375 2.20 36.87 3795 3795 MS2 13/14 Linfeng_122411_rIgG_4.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 698 2.20 0.00 0 23 25 2 466.26300 931.51872 -2.20 22.60 2415 2415 MS2 15/16 Linfeng_091311_rIgG_3.raw High LNQYFQK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 257 2.20 0.00 0 14 13 2 470.74622 940.48516 -3.78 23.59 2588 2588 MS2 11/12 Linfeng_091311_rIgG_2.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 315 2.19 0.00 0 3 25 2 701.89752 1402.78777 3.48 54.97 6482 6482 MS2 16/22 Linfeng_091311_rIgG_3.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 434 2.16 0.00 0 19 18 2 579.32861 1157.64995 -5.70 32.35 3785 3785 MS2 15/20 Linfeng_091311_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 285 2.14 0.00 0 16 25 2 502.29834 1003.58940 -4.13 35.31 4129 4129 MS2 16/18 Linfeng_091311_rIgG_3.raw High EGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 168 2.14 0.00 0 26 25 2 526.24957 1051.49187 -2.28 20.14 2078 2078 MS2 12/16 Linfeng_091311_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 2.13 0.00 0 20 25 2 644.85382 1288.70036 -3.01 31.85 3656 3656 MS2 18/22 Linfeng_091311_rIgG_6.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 227 2.13 0.00 0 3 12 2 513.27197 1025.53667 -4.70 37.98 4523 4523 MS2 13/14 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 245 2.12 0.00 0 33 25 2 709.40674 1417.80620 0.84 52.68 6379 6379 MS2 16/22 Linfeng_091311_rIgG_2.raw High EGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 184 2.11 0.00 0 23 25 2 526.24945 1051.49162 -2.52 20.15 2105 2105 MS2 14/16 Linfeng_091311_rIgG_2.raw High KLEAGIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 481 2.10 0.00 1 27 25 2 393.74414 786.48100 -2.87 16.26 1557 1557 MS2 10/12 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 254 2.08 0.00 0 34 25 2 709.40710 1417.80693 1.35 53.03 6311 6311 MS2 17/22 Linfeng_091311_rIgG_5.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 617 2.07 0.00 0 37 25 2 466.26294 931.51860 -2.33 22.71 2426 2426 MS2 15/16 Linfeng_091311_rIgG_4.raw High YPSPFFVFGEK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 389 2.07 0.00 0 10 25 2 659.33087 1317.65447 2.29 41.64 4268 4268 MS2 16/20 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 149 2.06 0.00 0 30 100 2 611.36768 1221.72807 6.44 42.50 5009 5009 MS2 15/20 Linfeng_20120125_PCAF_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.05 0.00 0 35 100 2 644.85938 1288.71147 5.61 36.44 3836 3836 MS2 15/22 Linfeng_20120125_PCAF_2.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 366 2.04 0.00 0 41 25 2 579.32916 1157.65105 -4.75 32.31 3740 3740 MS2 14/20 Linfeng_091311_rIgG_3.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 432 2.02 0.00 0 26 25 2 579.33325 1157.65923 2.31 30.85 2913 2913 MS2 12/20 Linfeng_122411_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 297 2.01 0.00 0 5 25 2 502.29831 1003.58934 -4.19 35.42 4135 4135 MS2 15/18 Linfeng_091311_rIgG_4.raw IPI00878536.1 Putative uncharacterized protein PES1 6.65 3 4 4 4 9.39 6.65 4 4 0.00 571 66.0 7.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LEGQAQAEAK Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 293 2.73 0.00 0 24 25 2 522.76947 1044.53166 -0.39 14.11 1215 1215 MS2 15/18 Linfeng_091311_rIgG_4.raw High LQLSLADFR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 294 2.29 0.00 0 6 25 2 531.79919 1062.59111 -2.97 38.95 4586 4586 MS2 14/16 Linfeng_091311_rIgG_4.raw High GSATNYITR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 314 2.22 0.00 0 22 25 2 491.75012 982.49297 -2.33 21.38 2240 2240 MS2 13/16 Linfeng_091311_rIgG_4.raw High LAALSASLAR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 513 2.15 0.00 0 33 25 2 486.79446 972.58165 -2.12 28.93 3283 3283 MS2 16/18 Linfeng_091311_rIgG_4.raw IPI00879819.1 Lamin-B2 9.50 2 4 6 10 10.39 5.50 4 4 13.99 5.67 3 6 600 67.6 5.35 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLESDVAELR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 392 3.07 0.00 0 25 25 2 544.78131 1088.55535 -2.71 31.13 3576 3576 MS2 16/18 Linfeng_091311_rIgG_4.raw High ATSSSSGSLSATGR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 229 2.64 0.00 0 9 25 2 634.80615 1268.60503 -2.15 16.07 1493 1493 MS2 19/26 Linfeng_091311_rIgG_4.raw High ALYESELADAR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 341 2.52 0.00 0 30 100 2 619.31073 1237.61418 6.64 29.01 2465 2465 MS2 15/20 Linfeng_20120125_PCAF_4.raw Medium KLLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 447 2.45 0.00 1 74 25 3 368.19531 1102.57138 -2.32 17.84 1742 1742 MS2 22/32 Linfeng_091311_rIgG_4.raw High ALYESELADAR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 330 2.42 0.00 0 20 100 2 619.31097 1237.61467 7.04 29.09 2479 2479 MS2 16/20 Linfeng_20120125_PCAF_4.raw High GLESDVAELR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 563 2.41 0.00 0 44 100 2 544.78589 1088.56450 5.70 35.84 3931 3931 MS2 16/18 Linfeng_20120125_PCAF_4.raw High GLESDVAELR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 550 2.35 0.00 0 48 100 2 544.78619 1088.56511 6.26 35.87 3938 3938 MS2 15/18 Linfeng_20120125_PCAF_4.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw High ALYESELADAR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 330 2.15 0.00 0 25 100 2 619.31079 1237.61431 6.74 28.94 2454 2454 MS2 14/20 Linfeng_20120125_PCAF_4.raw High LESLSYQLSGLQK Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 388 2.14 0.00 0 51 100 2 733.40381 1465.80034 7.24 41.19 5162 5162 MS2 16/24 Linfeng_20120125_PCAF_4.raw IPI00883857.2 Isoform Long of Heterogeneous nuclear ribonucleoprotein U 42.79 5 30 30 114 177.14 35.15 25 51 117.60 26.18 16 30 99.54 12.97 8 33 825 90.5 6.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 6.43 0.00 1 1 25 4 1082.95276 4328.78921 3.46 46.12 4849 4849 MS2 46/210 Linfeng_122411_rIgG_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 162 6.43 0.00 0 0 100 3 1042.82605 3126.46360 7.72 36.37 3823 3823 MS2 37/124 Linfeng_20120125_PCAF_2.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 305 6.42 0.00 0 9 25 3 908.78961 2724.35428 -0.51 43.15 5121 5121 MS2 36/84 Linfeng_091311_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 304 6.25 0.00 0 9 12 3 908.78857 2724.35117 -1.65 43.27 5133 5133 MS2 35/84 Linfeng_091311_rIgG_4.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 60 6.25 0.00 0 5 25 3 948.08813 2842.24985 3.43 50.13 5359 5359 MS2 41/92 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 302 6.20 0.00 0 3 9 3 908.78772 2724.34861 -2.59 43.11 5181 5181 MS2 36/84 Linfeng_091311_rIgG_2.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 147 6.17 0.00 0 0 25 3 1042.82056 3126.44712 2.45 31.37 2950 2950 MS2 40/124 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 321 6.00 0.00 0 2 7 3 908.79272 2724.36362 2.92 42.28 4352 4352 MS2 35/84 Linfeng_122411_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 5.85 0.00 0 14 25 3 948.08496 2842.24033 0.08 51.20 6127 6127 MS2 41/92 Linfeng_091311_rIgG_4.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 339 5.83 0.00 0 2 25 3 908.79352 2724.36600 3.80 42.21 4465 4465 MS2 37/84 Linfeng_122411_rIgG_4.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 162 5.78 0.00 0 2 86 3 1042.82556 3126.46213 7.25 36.97 3945 3945 MS2 40/124 Linfeng_20120125_PCAF_2.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 326 5.54 0.00 0 4 25 3 908.79248 2724.36289 2.65 42.49 4390 4390 MS2 37/84 Linfeng_122411_rIgG_2.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 5.36 0.00 0 31 25 3 948.08618 2842.24399 1.36 51.10 6190 6190 MS2 40/92 Linfeng_091311_rIgG_2.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 33 5.28 0.00 0 3 21 4 915.40479 3658.59731 -2.40 34.75 4056 4056 MS2 37/168 Linfeng_091311_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 5.23 0.00 0 32 25 3 948.08563 2842.24234 0.78 51.03 6101 6101 MS2 35/92 Linfeng_091311_rIgG_3.raw High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 4.94 0.00 1 1 25 3 1443.60046 4328.78684 2.91 46.17 4855 4855 MS2 32/140 Linfeng_122411_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 61 4.81 0.00 0 15 25 3 948.08936 2842.25351 4.71 50.24 5454 5454 MS2 37/92 Linfeng_122411_rIgG_4.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 33 4.67 0.00 0 1 11 4 915.40485 3658.59755 -2.33 34.89 4119 4119 MS2 38/168 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 469 4.64 0.00 0 9 25 3 549.95422 1647.84812 1.90 31.88 3015 3015 MS2 37/56 Linfeng_122411_rIgG_3.raw High SPQPPVEEEDEHFDDTVVcLDTYNcDLHFK Unambiguous 5 1 IPI00883857.2 C19(Carbamidomethyl); C25(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.58 0.00 0 10 25 4 909.64355 3635.55239 -1.50 38.24 4503 4503 MS2 38/174 Linfeng_091311_rIgG_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 149 4.58 0.00 0 6 25 4 782.36731 3126.44741 2.54 31.39 2952 2952 MS2 48/186 Linfeng_122411_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 476 4.53 0.00 0 16 6 3 549.95209 1647.84171 -1.99 33.13 3847 3847 MS2 36/56 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 441 4.50 0.00 0 4 4 2 824.42792 1647.84856 2.17 31.97 3028 3028 MS2 25/28 Linfeng_122411_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 4.42 0.00 0 30 25 3 868.08527 2602.24125 1.15 51.26 6210 6210 MS2 34/84 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 4.38 0.00 0 18 25 3 868.08374 2602.23667 -0.61 51.37 6139 6139 MS2 35/84 Linfeng_091311_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 4.35 0.00 0 31 25 3 868.08405 2602.23758 -0.26 51.74 6159 6159 MS2 29/84 Linfeng_091311_rIgG_5.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 407 4.27 0.00 0 3 100 2 824.43268 1647.85808 7.95 38.52 4240 4240 MS2 25/28 Linfeng_20120125_PCAF_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 391 4.20 0.00 0 59 100 2 824.43262 1647.85796 7.87 39.35 4397 4397 MS2 23/28 Linfeng_20120125_PCAF_2.raw High KAEGGGGGGRPGAPAAGDGKTEQK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 338 4.20 0.00 2 15 25 4 539.02234 2153.06753 -0.93 12.20 1004 1004 MS2 45/138 Linfeng_091311_rIgG_2.raw High RNFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 429 4.14 0.00 1 4 25 3 601.98773 1803.94864 1.41 28.21 2534 2534 MS2 28/60 Linfeng_122411_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 455 4.11 0.00 0 13 15 2 824.42365 1647.84001 -3.01 33.10 3886 3886 MS2 25/28 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 4.09 0.00 0 3 25 3 868.08765 2602.24839 3.89 50.17 5364 5364 MS2 33/84 Linfeng_122411_rIgG_3.raw High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 4.08 0.00 1 13 25 4 1082.95068 4328.78090 1.54 46.88 5588 5588 MS2 39/210 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 395 4.06 0.00 0 32 100 2 824.43121 1647.85515 6.17 38.87 4303 4303 MS2 24/28 Linfeng_20120125_PCAF_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 458 3.99 0.00 0 8 5 3 549.95142 1647.83969 -3.21 33.19 3897 3897 MS2 37/56 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 450 3.96 0.00 0 5 6 2 824.42438 1647.84148 -2.13 33.12 3846 3846 MS2 25/28 Linfeng_091311_rIgG_3.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 357 3.79 0.00 0 26 25 3 677.67230 2031.00235 0.90 51.80 6276 6276 MS2 27/72 Linfeng_091311_rIgG_2.raw High RNFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 391 3.76 0.00 1 19 100 2 902.48236 1803.95745 6.29 36.12 3776 3776 MS2 21/30 Linfeng_20120125_PCAF_2.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 379 3.58 0.00 0 29 25 3 677.67444 2031.00876 4.05 50.54 5410 5410 MS2 29/72 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 332 3.57 0.00 0 6 25 4 681.84589 2724.36172 2.22 42.32 4357 4357 MS2 36/126 Linfeng_122411_rIgG_3.raw High KDcEVVMMIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 3.50 0.00 1 8 100 2 852.93353 1704.85979 6.76 47.02 6057 6057 MS2 22/30 Linfeng_20120125_PCAF_2.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 198 3.50 0.00 1 10 25 4 797.63727 3187.52724 4.12 47.58 5142 5142 MS2 40/156 Linfeng_122411_rIgG_4.raw High KDcEVVMMIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 351 3.49 0.00 1 42 100 2 852.93359 1704.85991 6.83 46.24 5879 5879 MS2 23/30 Linfeng_20120125_PCAF_2.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 121 3.48 0.00 1 6 25 2 849.39563 1697.78398 1.99 31.48 2964 2964 MS2 20/24 Linfeng_122411_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 463 3.48 0.00 0 16 10 3 572.30707 1714.90665 -3.32 38.06 4534 4534 MS2 27/68 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 3.46 0.00 0 37 25 3 868.08569 2602.24253 1.64 51.36 6147 6147 MS2 28/84 Linfeng_091311_rIgG_4.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 367 3.46 0.00 0 16 25 3 677.67200 2031.00144 0.45 51.79 6185 6185 MS2 28/72 Linfeng_091311_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 3.43 0.00 1 20 25 4 797.63525 3187.51919 1.59 48.69 5816 5816 MS2 38/156 Linfeng_091311_rIgG_3.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 359 3.42 0.00 0 26 25 3 677.67212 2031.00180 0.63 51.90 6199 6199 MS2 29/72 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 398 3.27 0.00 0 25 100 2 824.43225 1647.85723 7.43 37.95 4577 4577 MS2 23/28 Linfeng_20120125_PCAF_6.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 194 3.25 0.00 1 8 25 4 797.63708 3187.52651 3.89 47.79 5063 5063 MS2 43/156 Linfeng_122411_rIgG_3.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 98 3.18 0.00 1 0 25 2 849.39069 1697.77410 -3.84 32.38 3749 3749 MS2 20/24 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 392 3.17 0.00 0 8 100 2 824.43268 1647.85808 7.95 38.57 4272 4272 MS2 22/28 Linfeng_20120125_PCAF_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 3.11 0.00 1 22 25 4 797.63409 3187.51455 0.13 48.72 5891 5891 MS2 43/156 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 388 3.10 0.00 0 24 100 2 824.43231 1647.85735 7.50 37.52 4053 4053 MS2 24/28 Linfeng_20120125_PCAF_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 393 3.02 0.00 0 38 100 2 824.43280 1647.85832 8.10 37.67 4079 4079 MS2 24/28 Linfeng_20120125_PCAF_3.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 337 3.01 0.00 0 12 25 2 691.85266 1382.69805 -0.32 33.80 3264 3264 MS2 19/22 Linfeng_122411_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 151 2.99 0.00 0 4 25 2 646.29657 1291.58586 1.33 32.87 3145 3145 MS2 15/18 Linfeng_122411_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 380 2.96 0.00 0 26 100 2 824.43250 1647.85771 7.73 37.79 4538 4538 MS2 22/28 Linfeng_20120125_PCAF_6.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 456 2.94 0.00 0 4 22 3 572.30701 1714.90647 -3.43 38.05 4479 4479 MS2 26/68 Linfeng_091311_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 431 2.90 0.00 0 5 25 3 572.30975 1714.91471 1.37 36.86 3652 3652 MS2 31/68 Linfeng_122411_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.90 0.00 1 0 25 3 1063.17981 3187.52488 3.37 47.51 5133 5133 MS2 27/104 Linfeng_122411_rIgG_4.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 387 2.89 0.00 0 16 100 2 824.43207 1647.85686 7.21 38.34 4502 4502 MS2 23/28 Linfeng_20120125_PCAF_4.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 99 2.88 0.00 1 20 25 2 849.38953 1697.77178 -5.20 32.47 3802 3802 MS2 17/24 Linfeng_091311_rIgG_2.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 186 2.83 0.00 0 5 100 2 646.30035 1291.59343 7.19 40.47 4612 4612 MS2 15/18 Linfeng_20120125_PCAF_2.raw Medium EKPYFPIPEEYTFIQNVPLEDRVR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 276 2.82 0.00 1 1 24 4 745.63959 2979.53652 3.80 40.66 4143 4143 MS2 43/138 Linfeng_122411_rIgG_3.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.80 0.00 0 4 25 2 753.27777 1505.54827 -2.45 17.41 1718 1718 MS2 19/22 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 369 2.77 0.00 0 29 21 2 857.95630 1714.90532 -4.10 38.00 4526 4526 MS2 23/34 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 364 2.77 0.00 0 3 21 2 857.96130 1714.91533 1.74 36.85 3651 3651 MS2 22/34 Linfeng_122411_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 384 2.74 0.00 0 17 13 2 857.95697 1714.90666 -3.32 38.01 4474 4474 MS2 21/34 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 122 2.72 0.00 0 26 25 2 646.29370 1291.58013 -3.11 33.76 3929 3929 MS2 15/18 Linfeng_091311_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 389 2.71 0.00 0 13 25 2 857.96063 1714.91399 0.95 36.99 3694 3694 MS2 21/34 Linfeng_122411_rIgG_2.raw High KAEGGGGGGRPGAPAAGDGK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 330 2.70 0.00 1 32 25 3 556.28009 1666.82572 0.01 11.97 981 981 MS2 32/76 Linfeng_091311_rIgG_2.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.70 0.00 0 2 25 2 753.27856 1505.54985 -1.39 17.27 1673 1673 MS2 17/22 Linfeng_091311_rIgG_3.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 148 2.68 0.00 1 7 100 2 849.39911 1697.79094 6.08 42.49 5007 5007 MS2 18/24 Linfeng_20120125_PCAF_2.raw Medium KAEGGGGGGRPGAPAAGDGK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 346 2.68 0.00 1 19 25 4 417.46234 1666.82754 1.10 11.96 980 980 MS2 44/114 Linfeng_091311_rIgG_2.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 159 2.68 0.00 1 34 100 2 849.39819 1697.78911 5.01 41.48 4802 4802 MS2 15/24 Linfeng_20120125_PCAF_2.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.68 0.00 0 10 25 2 753.27844 1505.54961 -1.56 17.36 1674 1674 MS2 19/22 Linfeng_091311_rIgG_4.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 383 2.66 0.00 0 34 100 2 824.43182 1647.85637 6.91 37.72 4360 4360 MS2 22/28 Linfeng_20120125_PCAF_4.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 245 2.59 0.00 0 0 25 3 868.08746 2602.24784 3.68 50.09 5437 5437 MS2 25/84 Linfeng_122411_rIgG_4.raw Medium KKAEGGGGGGRPGAPAAGDGK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 419 2.58 0.00 2 37 25 4 449.48511 1794.91860 -1.15 2.66 228 228 MS2 33/120 Linfeng_091311_rIgG_2.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 190 2.56 0.00 0 5 100 2 646.30103 1291.59477 8.23 41.19 4747 4747 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 2.56 0.00 0 0 25 2 1421.63123 2842.25517 5.30 50.26 5376 5376 MS2 15/46 Linfeng_122411_rIgG_3.raw High VSELKEELKK Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 312 2.54 0.00 2 21 25 2 601.85144 1202.69560 -2.94 18.01 1803 1803 MS2 15/18 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 421 2.54 0.00 0 45 100 3 549.95709 1647.85672 7.13 37.87 4116 4116 MS2 27/56 Linfeng_20120125_PCAF_2.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 171 2.53 0.00 1 13 100 2 849.40137 1697.79546 8.74 41.86 5003 5003 MS2 13/24 Linfeng_20120125_PCAF_3.raw Medium EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 314 2.52 0.00 0 7 25 4 681.84338 2724.35171 -1.45 43.38 5149 5149 MS2 28/126 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 188 2.50 0.00 0 4 100 2 646.30072 1291.59416 7.76 40.73 4742 4742 MS2 15/18 Linfeng_20120125_PCAF_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 394 2.45 0.00 0 46 100 2 824.43103 1647.85478 5.95 37.65 5105 5105 MS2 19/28 Linfeng_20120125_PCAF_5.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 365 2.44 0.00 0 29 100 2 691.85785 1382.70842 7.19 42.91 5096 5096 MS2 18/22 Linfeng_20120125_PCAF_2.raw High VSELKEELK Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 453 2.43 0.00 1 15 25 2 537.80420 1074.60112 -2.84 20.68 2179 2179 MS2 14/16 Linfeng_091311_rIgG_2.raw High DIDIHEVR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 270 2.42 0.00 0 41 25 2 498.75729 996.50731 -3.63 24.28 2685 2685 MS2 13/14 Linfeng_091311_rIgG_2.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 348 2.39 0.00 0 20 100 2 691.85767 1382.70806 6.92 42.48 5004 5004 MS2 18/22 Linfeng_20120125_PCAF_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 390 2.39 0.00 0 3 100 2 857.96545 1714.92363 6.58 47.56 6184 6184 MS2 21/34 Linfeng_20120125_PCAF_2.raw Medium GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 149 2.38 0.00 1 14 25 3 566.59900 1697.78244 1.08 31.38 2951 2951 MS2 21/48 Linfeng_122411_rIgG_3.raw High McLFAGFQR Unambiguous 4 1 IPI00883857.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 136 2.38 0.00 0 15 14 2 565.26843 1129.52959 1.23 36.85 3650 3650 MS2 15/16 Linfeng_122411_rIgG_3.raw High LLEQYKEESK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 334 2.36 0.00 1 15 25 2 633.83087 1266.65447 -2.51 20.77 2192 2192 MS2 14/18 Linfeng_091311_rIgG_2.raw Medium AEGGGGGGRPGAPAAGDGK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 215 2.31 0.00 0 11 25 3 513.58051 1538.72696 -2.45 13.62 1184 1184 MS2 27/72 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 397 2.31 0.00 0 10 100 2 857.96606 1714.92485 7.29 46.53 5944 5944 MS2 19/34 Linfeng_20120125_PCAF_2.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 468 2.30 0.00 0 25 25 2 524.77600 1048.54473 2.37 25.46 2313 2313 MS2 14/18 Linfeng_122411_rIgG_4.raw Medium SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 442 2.25 0.00 0 26 100 3 572.31281 1714.92386 6.71 46.95 6040 6040 MS2 22/68 Linfeng_20120125_PCAF_2.raw High McLFAGFQR Unambiguous 4 1 IPI00883857.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 121 2.24 0.00 0 15 25 2 565.26599 1129.52471 -3.09 37.92 4463 4463 MS2 15/16 Linfeng_091311_rIgG_3.raw High KAVVVcPK Unambiguous 4 1 IPI00883857.2 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 540 2.23 0.00 1 17 25 2 450.76941 900.53154 -2.27 14.68 1334 1334 MS2 12/14 Linfeng_091311_rIgG_2.raw High LLEQYKEESK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 338 2.23 0.00 1 13 25 2 633.83118 1266.65508 -2.03 20.79 2168 2168 MS2 14/18 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 197 2.21 0.00 0 9 100 2 646.30029 1291.59331 7.10 40.37 4593 4593 MS2 15/18 Linfeng_20120125_PCAF_2.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 387 2.20 0.00 0 19 17 2 524.77277 1048.53826 -3.80 28.10 3215 3215 MS2 14/18 Linfeng_091311_rIgG_2.raw High LLEQYKEESKK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 321 2.14 0.00 2 8 25 2 697.87836 1394.74944 -2.28 18.64 1893 1893 MS2 15/20 Linfeng_091311_rIgG_2.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 168 2.11 0.00 1 28 100 2 849.40118 1697.79509 8.53 41.76 4980 4980 MS2 13/24 Linfeng_20120125_PCAF_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 379 2.10 0.00 0 22 100 2 857.96680 1714.92632 8.14 46.78 6186 6186 MS2 15/34 Linfeng_20120125_PCAF_3.raw High DIDIHEVR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 266 2.10 0.00 0 8 25 2 498.75769 996.50810 -2.84 24.26 2648 2648 MS2 13/14 Linfeng_091311_rIgG_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 335 2.04 0.00 0 71 25 2 524.77307 1048.53887 -3.22 28.04 3169 3169 MS2 14/18 Linfeng_091311_rIgG_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 401 2.01 0.00 0 16 25 2 524.77344 1048.53960 -2.52 28.19 3183 3183 MS2 14/18 Linfeng_091311_rIgG_4.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 196 2.01 0.00 0 3 100 2 646.30035 1291.59343 7.19 41.36 4780 4780 MS2 15/18 Linfeng_20120125_PCAF_2.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 381 2.00 0.00 0 26 100 2 691.85754 1382.70781 6.75 41.66 4956 4956 MS2 17/22 Linfeng_20120125_PCAF_3.raw IPI00889723.2 C4A protein 4.83 11 7 7 26 46.04 4.83 7 16 33.17 3.83 4 10 1698 187.6 7.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 395 4.36 0.00 0 14 25 2 771.41083 1541.81438 -1.73 27.67 3118 3118 MS2 22/28 Linfeng_091311_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 187 4.27 0.00 0 7 25 3 695.72949 2085.17392 1.71 42.78 4417 4417 MS2 33/84 Linfeng_122411_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 175 4.07 0.00 0 6 25 3 695.73053 2085.17704 3.20 42.54 4506 4506 MS2 31/84 Linfeng_122411_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 377 4.05 0.00 0 11 25 2 771.41071 1541.81413 -1.89 27.77 3125 3125 MS2 22/28 Linfeng_091311_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 386 4.02 0.00 0 2 25 2 771.41437 1541.82146 2.87 22.80 1841 1841 MS2 21/28 Linfeng_122411_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 407 3.98 0.00 0 31 25 2 771.41388 1541.82048 2.23 25.02 2254 2254 MS2 22/28 Linfeng_122411_rIgG_4.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 196 3.55 0.00 0 29 25 3 695.72699 2085.16642 -1.89 43.40 5151 5151 MS2 33/84 Linfeng_091311_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 196 3.51 0.00 0 10 25 3 695.72705 2085.16660 -1.80 43.51 5162 5162 MS2 34/84 Linfeng_091311_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 347 3.42 0.00 0 6 25 2 771.40967 1541.81206 -3.23 28.09 3159 3159 MS2 22/28 Linfeng_091311_rIgG_6.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 404 3.40 0.00 0 21 25 2 771.41455 1541.82182 3.10 21.79 1730 1730 MS2 19/28 Linfeng_122411_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 403 3.27 0.00 0 19 25 3 514.60913 1541.81284 -2.73 27.78 3133 3133 MS2 26/56 Linfeng_091311_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 347 3.21 0.00 0 14 25 2 771.41003 1541.81279 -2.76 28.05 3102 3102 MS2 19/28 Linfeng_091311_rIgG_5.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 407 3.00 0.00 0 35 25 3 514.61145 1541.81980 1.79 25.00 2250 2250 MS2 29/56 Linfeng_122411_rIgG_4.raw High YLDKTEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 313 2.75 0.00 1 7 25 3 645.99335 1935.96549 -2.28 29.46 3361 3361 MS2 30/60 Linfeng_091311_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 372 2.71 0.00 0 15 25 2 684.36658 1367.72588 3.86 47.11 4976 4976 MS2 18/22 Linfeng_122411_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 329 2.70 0.00 0 16 25 2 684.36560 1367.72392 2.43 47.04 5075 5075 MS2 18/22 Linfeng_122411_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 430 2.65 0.00 0 22 25 3 514.61182 1541.82090 2.50 22.30 1788 1788 MS2 16/56 Linfeng_122411_rIgG_3.raw High TEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 321 2.52 0.00 0 20 25 2 708.85205 1416.69682 -2.66 28.44 3218 3218 MS2 17/22 Linfeng_091311_rIgG_4.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 369 2.47 0.00 0 21 25 2 684.36334 1367.71941 -0.87 48.40 5779 5779 MS2 17/22 Linfeng_091311_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 371 2.40 0.00 0 21 25 2 684.36371 1367.72014 -0.34 48.50 5791 5791 MS2 18/22 Linfeng_091311_rIgG_4.raw Medium YLDKTEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 332 2.36 0.00 1 42 25 3 645.99622 1935.97409 2.17 28.05 2514 2514 MS2 22/60 Linfeng_122411_rIgG_3.raw High TEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 333 2.17 0.00 0 20 25 2 708.85266 1416.69805 -1.80 28.51 3233 3233 MS2 15/22 Linfeng_091311_rIgG_3.raw High DHAVDLIQK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 330 2.14 0.00 0 11 25 2 519.78156 1038.55583 -1.97 23.08 2477 2477 MS2 14/16 Linfeng_091311_rIgG_4.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 353 2.12 0.00 0 47 25 2 684.36487 1367.72246 1.36 50.09 5991 5991 MS2 16/22 Linfeng_091311_rIgG_3.raw High ANSFLGEK Unambiguous 7 1 IPI00889723.2 CID 1.0000 0.0000 1 1 343 2.07 0.00 0 46 25 2 433.22275 865.43822 -3.73 23.52 2545 2545 MS2 11/14 Linfeng_091311_rIgG_3.raw High ANSFLGEK Unambiguous 7 1 IPI00889723.2 CID 1.0000 0.0000 1 1 317 2.02 0.00 0 23 25 2 433.22278 865.43828 -3.66 23.65 2558 2558 MS2 11/14 Linfeng_091311_rIgG_4.raw IPI00892671.1 32 kDa protein 21.02 13 4 4 11 26.59 21.02 4 11 0.00 295 32.0 8.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPEVTcVVVDVSHEDPEVK Unambiguous 13 1 IPI00892671.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 3.02 0.00 0 15 25 3 713.67889 2139.02213 -2.52 33.48 3998 3998 MS2 34/72 Linfeng_091311_rIgG_10.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.62 0.00 0 15 25 2 661.34131 1321.67534 -2.08 29.78 3367 3367 MS2 17/26 Linfeng_091311_rIgG_9.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.60 0.00 0 3 25 2 661.34174 1321.67620 -1.44 29.83 3375 3375 MS2 18/26 Linfeng_091311_rIgG_7.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 315 2.59 0.00 0 25 25 3 625.31110 1873.91874 -1.68 41.15 4831 4831 MS2 28/64 Linfeng_091311_rIgG_9.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 174 2.49 0.00 0 16 25 2 937.46222 1873.91716 -2.52 41.03 4975 4975 MS2 22/32 Linfeng_091311_rIgG_10.raw High GPSVFPLAPSSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 512 2.36 0.00 0 27 25 2 593.82513 1186.64299 -3.13 32.77 3906 3906 MS2 16/22 Linfeng_091311_rIgG_10.raw High GPSVFPLAPSSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 534 2.34 0.00 0 35 25 2 593.82520 1186.64311 -3.03 32.89 3777 3777 MS2 15/22 Linfeng_091311_rIgG_9.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 187 2.23 0.00 0 43 25 2 937.46289 1873.91850 -1.81 41.10 4920 4920 MS2 16/32 Linfeng_091311_rIgG_8.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 411 2.18 0.00 0 30 25 2 661.34058 1321.67388 -3.19 29.84 3440 3440 MS2 17/26 Linfeng_091311_rIgG_8.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 386 2.09 0.00 0 14 25 2 661.34088 1321.67449 -2.73 29.88 3397 3397 MS2 17/26 Linfeng_091311_rIgG_6.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 2.07 0.00 0 12 25 2 661.34113 1321.67497 -2.36 29.64 3483 3483 MS2 18/26 Linfeng_091311_rIgG_10.raw IPI00894365.2 "cDNA FLJ52842, highly similar to Actin, cytoplasmic 1" 18.52 8 5 5 22 27.83 13.96 4 11 32.31 12.54 3 11 0.00 351 39.2 5.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 301 3.77 0.00 0 16 25 2 895.95135 1790.89543 1.92 37.35 3904 3904 MS2 25/30 Linfeng_122411_rIgG_6.raw High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 348 3.22 0.00 0 21 25 3 597.63654 1790.89505 1.71 37.38 3907 3907 MS2 32/60 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 272 3.16 0.00 0 27 20 3 652.02527 1954.06125 -1.66 30.19 3059 3059 MS2 28/68 Linfeng_122411_rIgG_5.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 249 3.11 0.00 0 3 3 3 652.02698 1954.06638 0.96 0.11 16 16 MS2 31/68 Linfeng_122411_rIgG_1.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 246 3.09 0.00 0 8 25 3 652.02728 1954.06729 1.43 30.66 3059 3059 MS2 28/68 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 247 3.08 0.00 0 10 25 3 652.02698 1954.06638 0.96 30.43 2764 2764 MS2 27/68 Linfeng_122411_rIgG_8.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 174 2.90 0.00 0 6 25 2 566.76563 1132.52397 -2.64 23.43 2091 2091 MS2 16/18 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 270 2.90 0.00 0 3 25 3 652.02521 1954.06107 -1.76 32.01 3677 3677 MS2 26/68 Linfeng_091311_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 255 2.84 0.00 0 13 25 3 652.02808 1954.06968 2.65 29.79 2526 2526 MS2 25/68 Linfeng_122411_rIgG_9.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 138 2.79 0.00 0 45 25 2 566.76434 1132.52141 -4.90 25.63 2775 2775 MS2 16/18 Linfeng_091311_rIgG_5.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 128 2.72 0.00 0 42 25 2 488.72656 976.44585 -2.56 20.89 2184 2184 MS2 16/18 Linfeng_091311_rIgG_6.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 141 2.62 0.00 0 23 25 2 566.76379 1132.52031 -5.87 25.65 2870 2870 MS2 16/18 Linfeng_091311_rIgG_8.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 85 2.61 0.00 0 16 25 2 599.76367 1198.52007 -1.85 19.15 1942 1942 MS2 16/20 Linfeng_091311_rIgG_6.raw High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 307 2.60 0.00 0 5 8 2 895.94989 1790.89250 0.29 0.78 112 112 MS2 18/30 Linfeng_122411_rIgG_1.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 12 25 3 652.02423 1954.05814 -3.26 31.89 3789 3789 MS2 30/68 Linfeng_091311_rIgG_10.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 141 2.55 0.00 0 40 25 2 488.72684 976.44640 -2.00 20.73 2236 2236 MS2 16/18 Linfeng_091311_rIgG_10.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 135 2.54 0.00 0 31 25 2 566.76324 1132.51921 -6.84 25.41 2895 2895 MS2 16/18 Linfeng_091311_rIgG_10.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 259 2.52 0.00 0 6 25 3 652.02771 1954.06858 2.09 29.78 2613 2613 MS2 28/68 Linfeng_122411_rIgG_10.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 122 2.20 0.00 0 60 25 2 488.72614 976.44499 -3.44 20.87 2137 2137 MS2 14/18 Linfeng_091311_rIgG_9.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 84 2.18 0.00 0 16 25 2 599.76270 1198.51811 -3.48 19.21 1901 1901 MS2 13/20 Linfeng_091311_rIgG_9.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 77 2.16 0.00 0 28 25 2 599.76263 1198.51799 -3.58 19.19 1977 1977 MS2 14/20 Linfeng_091311_rIgG_8.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 180 2.03 0.00 0 9 10 2 566.76569 1132.52410 -2.53 3.30 295 295 MS2 15/18 Linfeng_122411_rIgG_9.raw IPI00903112.1 "cDNA FLJ36533 fis, clone TRACH2004428, highly similar to Lactotransferrin (Fragment)" 35.29 6 1 20 22 72.05 35.29 20 22 697 76.7 8.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 374 5.39 0.00 0 10 15 3 696.69568 2088.07248 -1.73 45.99 5603 5603 MS2 40/72 Linfeng_091311_rIgG_10.raw High DSPIQcIQAIAENR Unambiguous 8 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 5.11 0.00 0 15 25 3 538.93390 1614.78714 -2.08 41.52 5038 5038 MS2 32/52 Linfeng_091311_rIgG_10.raw High SQQSSDPDPNcVDRPVEGYLAVAVVR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.98 0.00 0 4 22 3 953.45874 2858.36167 -4.27 36.43 4386 4386 MS2 37/100 Linfeng_091311_rIgG_10.raw High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 334 4.76 0.00 0 12 25 2 1044.54004 2088.07280 -1.58 46.00 5605 5605 MS2 25/36 Linfeng_091311_rIgG_10.raw High SNLcALcIGDEQGENK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 4.04 0.00 0 17 25 2 904.39893 1807.79057 -2.45 30.45 3595 3595 MS2 22/30 Linfeng_091311_rIgG_10.raw High FDEYFSQScAPGSDPR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 15 3.80 0.00 0 4 25 2 931.88385 1862.76042 -2.50 30.44 3594 3594 MS2 22/30 Linfeng_091311_rIgG_10.raw High KGGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 465 3.78 0.00 1 11 25 3 506.94531 1518.82138 -4.05 32.07 3813 3813 MS2 24/52 Linfeng_091311_rIgG_10.raw High SVQWcAVSQPEATK Unambiguous 5 1 IPI00903112.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 3.43 0.00 0 5 25 2 795.88135 1590.75542 -1.71 28.40 3313 3313 MS2 19/26 Linfeng_091311_rIgG_10.raw High LADFALLcLDGK Unambiguous 3 2 IPI00789477.1;IPI00903112.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.39 0.00 0 32 25 2 668.35144 1335.69560 -1.63 41.80 5074 5074 MS2 19/22 Linfeng_091311_rIgG_10.raw High THYYAVAVVK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 382 2.91 0.00 0 13 25 3 384.21240 1150.62265 -2.51 23.99 2692 2692 MS2 21/36 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 450 2.85 0.00 0 6 25 3 487.59842 1460.78070 -3.40 24.80 2808 2808 MS2 26/48 Linfeng_091311_rIgG_10.raw High DGAGDVAFIR Unambiguous 5 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 359 2.82 0.00 0 39 25 2 510.75729 1020.50731 -3.57 31.03 3673 3673 MS2 15/18 Linfeng_091311_rIgG_10.raw High NLLFNDNTEcLAR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 2.79 0.00 0 15 25 2 790.37579 1579.74431 -5.74 35.26 4233 4233 MS2 20/24 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 396 2.66 0.00 0 8 25 2 730.89404 1460.78081 -3.33 24.88 2819 2819 MS2 18/24 Linfeng_091311_rIgG_10.raw High cLAENAGDVAFVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.65 0.00 0 5 25 2 697.33984 1393.67241 -4.09 30.74 3633 3633 MS2 20/24 Linfeng_091311_rIgG_10.raw High VVWcAVGEQELR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.52 0.00 0 15 25 2 723.36212 1445.71697 -2.54 33.46 3995 3995 MS2 18/22 Linfeng_091311_rIgG_10.raw High GGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 398 2.51 0.00 0 24 25 2 695.86725 1390.72722 -3.85 35.77 4300 4300 MS2 16/24 Linfeng_091311_rIgG_10.raw High SDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 254 2.46 0.00 0 7 25 2 619.30457 1237.60185 -3.31 29.40 3451 3451 MS2 18/20 Linfeng_091311_rIgG_10.raw Medium RSDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 371 2.39 0.00 1 26 25 3 465.23816 1393.69992 -5.13 25.94 2968 2968 MS2 19/44 Linfeng_091311_rIgG_10.raw High EDAIWNLLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 401 2.29 0.00 0 37 25 2 565.30280 1129.59831 -1.57 43.57 5297 5297 MS2 15/16 Linfeng_091311_rIgG_10.raw High FQLFGSPSGQK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 323 2.29 0.00 0 4 16 2 598.30554 1195.60381 -5.72 33.73 4031 4031 MS2 15/20 Linfeng_091311_rIgG_10.raw High FFSAScVPGADK Unambiguous 5 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 2.20 0.00 0 4 25 2 643.29626 1285.58525 -2.30 29.21 3425 3425 MS2 19/22 Linfeng_091311_rIgG_10.raw IPI00908449.1 "cDNA FLJ58737, highly similar to Splicing factor 3A subunit 3" 10.49 2 3 3 6 0.00 0.00 15.46 10.49 3 6 448 52.4 5.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ENPSEEAQNLVEFTDEEGYGR Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 54 4.30 0.00 0 0 100 2 1207.03503 2413.06279 8.32 46.37 6403 6403 MS2 23/40 Linfeng_20120125_PCAF_4.raw Medium LMDVMAKEMLTKK Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 408 2.47 0.00 2 5 100 3 513.27679 1537.81583 0.43 34.70 3822 3822 MS2 18/48 Linfeng_20120125_PCAF_6.raw Medium VKPLQDQNELFGK Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 472 2.34 0.00 0 31 100 3 505.94684 1515.82596 6.15 32.40 3129 3129 MS2 21/48 Linfeng_20120125_PCAF_4.raw High VKPLQDQNELFGK Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 419 2.29 0.00 0 24 100 2 758.41656 1515.82585 6.08 32.37 3123 3123 MS2 14/24 Linfeng_20120125_PCAF_4.raw High VKPLQDQNELFGK Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 473 2.05 0.00 0 16 100 2 758.41565 1515.82402 4.87 32.62 3183 3183 MS2 12/24 Linfeng_20120125_PCAF_4.raw High VKPLQDQNELFGK Unambiguous 2 1 IPI00908449.1 CID 1.0000 0.0000 1 1 426 2.02 0.00 0 10 100 2 758.41638 1515.82549 5.84 32.44 3140 3140 MS2 15/24 Linfeng_20120125_PCAF_4.raw IPI00908723.1 "cDNA FLJ61039, highly similar to Stomatin-like protein 2" 23.79 2 5 5 6 19.61 23.79 5 6 311 33.3 8.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NTVVLFVPQQEAWVVER Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 363 4.33 0.00 0 6 25 2 1007.54083 2014.07439 -0.67 42.56 5018 5018 MS2 22/32 Linfeng_091311_rIgG_6.raw High AEQINQAAGEASAVLAK Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 428 3.89 0.00 0 9 25 2 835.93768 1670.86809 -1.67 31.63 3626 3626 MS2 25/32 Linfeng_091311_rIgG_6.raw High DVQGTDASLDEELDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 86 3.41 0.00 0 6 25 2 831.87451 1662.74175 -2.20 31.08 3556 3556 MS2 24/28 Linfeng_091311_rIgG_6.raw High ILEPGLNILIPVLDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 41 2.79 0.00 0 19 25 3 559.00952 1675.01401 -0.81 49.63 5900 5900 MS2 20/56 Linfeng_091311_rIgG_6.raw High ILEPGLNILIPVLDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 35 2.79 0.00 0 75 25 2 838.01099 1675.01470 -0.40 49.62 5898 5898 MS2 18/28 Linfeng_091311_rIgG_6.raw High ATVLESEGTR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 416 2.41 0.00 0 12 25 2 531.77399 1062.54070 -1.82 20.49 2129 2129 MS2 17/18 Linfeng_091311_rIgG_6.raw IPI00908873.1 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 8.57 1 1 4 6 17.92 8.57 4 6 0.00 700 73.7 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATGATQQDANASSLLDIYSFWLNR Unambiguous 1 1 IPI00908873.1 CID 1.0000 0.0000 1 1 281 5.27 0.00 0 23 25 3 881.43353 2642.28604 0.54 51.84 6191 6191 MS2 35/92 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 124 2.87 0.00 0 5 25 3 563.33221 1687.98209 2.29 54.30 6422 6422 MS2 27/56 Linfeng_091311_rIgG_3.raw High VREEEIEVDSR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 312 2.86 0.00 1 8 25 3 454.22696 1360.66632 -2.97 20.98 2193 2193 MS2 22/40 Linfeng_091311_rIgG_3.raw Medium VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 138 2.42 0.00 0 0 25 3 563.33118 1687.97898 0.44 54.42 6457 6457 MS2 27/56 Linfeng_091311_rIgG_4.raw High DNQLSEVANK Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 286 2.37 0.00 0 18 25 2 559.27484 1117.54241 -5.40 22.13 2351 2351 MS2 13/18 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 96 2.12 0.00 0 66 25 2 844.49548 1687.98369 3.23 54.35 6428 6428 MS2 19/28 Linfeng_091311_rIgG_3.raw IPI00909059.5 "cDNA FLJ53910, highly similar to Keratin, type II cytoskeletal 6A" 40.56 7 1 27 324 339.87 34.02 20 133 218.61 30.28 17 78 286.23 31.59 16 113 535 57.8 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 260 3.80 0.00 1 30 100 3 787.05029 2359.13633 6.85 42.78 5068 5068 MS2 33/76 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 3.67 0.00 0 3 61 2 724.39612 1447.78496 6.75 28.00 2292 2292 MS2 24/32 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 3.54 0.00 0 9 100 2 724.39636 1447.78545 7.09 28.19 2172 2172 MS2 22/32 Linfeng_20120125_PCAF_3.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 324 3.50 0.00 1 18 100 2 847.92865 1694.85002 4.80 33.01 3052 3052 MS2 17/28 Linfeng_20120125_PCAF_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 257 3.43 0.00 1 31 100 3 787.05023 2359.13614 6.77 42.73 5058 5058 MS2 31/76 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.39 0.00 0 16 25 2 724.38947 1447.77165 -2.44 27.27 3101 3101 MS2 22/32 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 3.34 0.00 1 11 100 2 847.92889 1694.85051 5.09 33.07 3067 3067 MS2 18/28 Linfeng_20120125_PCAF_3.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 3.32 0.00 0 7 25 2 799.88513 1598.76299 2.37 26.89 2388 2388 MS2 19/32 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 3.31 0.00 1 19 100 2 847.93024 1694.85320 6.68 32.67 3111 3111 MS2 20/28 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 3.27 0.00 1 6 100 2 847.92853 1694.84978 4.66 32.80 3003 3003 MS2 20/28 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 380 3.27 0.00 0 12 100 2 724.39478 1447.78227 4.90 27.26 2549 2549 MS2 21/32 Linfeng_20120125_PCAF_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 311 3.25 0.00 1 16 100 2 847.92816 1694.84905 4.23 32.84 3012 3012 MS2 19/28 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 340 3.15 0.00 0 9 100 2 724.39600 1447.78472 6.59 27.98 2238 2238 MS2 22/32 Linfeng_20120125_PCAF_9.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 3.14 0.00 1 11 100 2 847.92828 1694.84929 4.37 32.76 2992 2992 MS2 20/28 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 3.11 0.00 0 33 100 2 724.39624 1447.78520 6.92 27.40 2483 2483 MS2 20/32 Linfeng_20120125_PCAF_1.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 3.08 0.00 0 18 100 2 724.39648 1447.78569 7.26 26.93 2099 2099 MS2 18/32 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.08 0.00 0 9 25 2 799.88464 1598.76201 1.75 28.06 2717 2717 MS2 18/32 Linfeng_122411_rIgG_6.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 380 3.08 0.00 0 12 100 2 724.39514 1447.78301 5.41 29.02 2472 2472 MS2 16/32 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 3.06 0.00 1 7 100 2 675.87073 1350.73418 5.74 25.30 1879 1879 MS2 18/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 397 3.00 0.00 0 12 25 2 724.38983 1447.77239 -1.93 27.27 3064 3064 MS2 18/32 Linfeng_091311_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.99 0.00 0 6 100 2 724.39612 1447.78496 6.75 27.83 2682 2682 MS2 20/32 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 255 2.98 0.00 0 9 25 2 799.88348 1598.75969 0.30 26.18 2509 2509 MS2 19/32 Linfeng_122411_rIgG_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 212 2.97 0.00 0 13 25 2 506.75488 1012.50249 -3.31 24.33 2625 2625 MS2 15/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 235 2.94 0.00 0 34 25 2 506.75726 1012.50725 1.39 20.45 1716 1716 MS2 15/18 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 453 2.90 0.00 1 11 25 3 453.24719 1357.72702 -3.84 30.04 3478 3478 MS2 24/44 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.88 0.00 0 22 25 2 704.36133 1407.71538 2.76 39.90 4062 4062 MS2 18/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.87 0.00 0 12 25 2 799.88080 1598.75432 -3.06 29.00 3336 3336 MS2 20/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 448 2.84 0.00 1 18 25 3 453.24771 1357.72858 -2.70 30.25 3431 3431 MS2 24/44 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.84 0.00 0 11 25 2 704.36102 1407.71477 2.32 40.03 4238 4238 MS2 18/22 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 222 2.82 0.00 0 9 25 2 506.75400 1012.50072 -5.06 23.87 2331 2331 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 351 2.81 0.00 0 42 100 2 724.39630 1447.78533 7.01 27.34 2469 2469 MS2 18/32 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.80 0.00 1 10 100 2 847.92792 1694.84856 3.94 32.88 3022 3022 MS2 19/28 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.79 0.00 0 38 100 2 724.39612 1447.78496 6.75 27.31 2348 2348 MS2 18/32 Linfeng_20120125_PCAF_6.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 358 2.79 0.00 1 1 100 2 675.87115 1350.73503 6.38 24.63 1795 1795 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 359 2.78 0.00 0 32 25 2 704.35797 1407.70867 -2.01 40.84 4893 4893 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 2.76 0.00 1 13 100 2 675.87152 1350.73577 6.92 23.81 1565 1565 MS2 15/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 2.75 0.00 0 12 25 2 799.88153 1598.75578 -2.14 29.19 3288 3288 MS2 20/32 Linfeng_091311_rIgG_9.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.75 0.00 1 8 100 2 675.87079 1350.73430 5.83 23.62 1688 1688 MS2 15/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.74 0.00 0 2 100 2 799.88922 1598.77117 7.48 30.00 2464 2464 MS2 19/32 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.70 0.00 0 34 25 2 704.36005 1407.71282 0.93 39.89 4042 4042 MS2 18/22 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.69 0.00 0 36 25 3 533.59131 1598.75937 0.10 26.31 2527 2527 MS2 25/64 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 13 25 2 704.36017 1407.71306 1.11 39.88 3652 3652 MS2 18/22 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.67 0.00 0 38 25 2 704.36121 1407.71514 2.58 39.80 4162 4162 MS2 18/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.67 0.00 0 19 100 2 554.27832 1107.54936 5.79 19.57 1382 1382 MS2 15/16 Linfeng_20120125_PCAF_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 7 100 2 554.27863 1107.54997 6.34 17.67 1327 1327 MS2 14/16 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.66 0.00 0 22 25 2 704.35767 1407.70806 -2.45 40.92 4840 4840 MS2 17/22 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 16 100 2 724.39722 1447.78716 8.27 27.19 1998 1998 MS2 18/32 Linfeng_20120125_PCAF_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.64 0.00 1 4 100 2 675.87225 1350.73723 8.00 24.58 1644 1644 MS2 16/22 Linfeng_20120125_PCAF_3.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.63 0.00 0 42 25 2 704.35791 1407.70854 -2.10 41.07 4822 4822 MS2 18/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.63 0.00 0 11 100 2 724.39673 1447.78618 7.60 27.95 2234 2234 MS2 21/32 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 536 2.62 0.00 1 24 25 3 453.24814 1357.72986 -1.75 30.09 3440 3440 MS2 25/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 363 2.59 0.00 1 29 100 2 675.87109 1350.73491 6.29 23.69 1707 1707 MS2 14/22 Linfeng_20120125_PCAF_1.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.57 0.00 0 19 25 2 704.35681 1407.70635 -3.66 41.01 4801 4801 MS2 17/22 Linfeng_091311_rIgG_5.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.57 0.00 2 15 100 3 436.89230 1308.66236 6.16 17.30 1300 1300 MS2 19/36 Linfeng_20120125_PCAF_6.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.57 0.00 0 4 100 2 724.39630 1447.78533 7.01 27.52 2194 2194 MS2 19/32 Linfeng_20120125_PCAF_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.56 0.00 0 21 100 2 724.39655 1447.78581 7.34 26.98 2111 2111 MS2 20/32 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 2.55 0.00 1 21 25 3 453.24808 1357.72968 -1.89 30.27 3451 3451 MS2 24/44 Linfeng_091311_rIgG_6.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.54 0.00 0 1 2 2 704.36108 1407.71489 2.41 48.57 6449 6449 MS2 18/22 Linfeng_20120125_PCAF_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 389 2.54 0.00 1 12 25 2 679.36774 1357.72820 -2.98 30.14 3179 3179 MS2 18/22 Linfeng_091311_rIgG_1.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.53 0.00 0 26 20 2 704.35791 1407.70854 -2.10 40.85 4632 4632 MS2 18/22 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.52 0.00 2 15 100 3 436.89246 1308.66281 6.51 14.25 898 898 MS2 15/36 Linfeng_20120125_PCAF_1.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 409 2.52 0.00 1 24 100 2 675.87201 1350.73674 7.64 24.06 1767 1767 MS2 15/22 Linfeng_20120125_PCAF_1.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 368 2.51 0.00 0 19 100 2 583.29999 1165.59270 6.76 25.58 1922 1922 MS2 17/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 539 2.51 0.00 1 24 25 3 453.24838 1357.73059 -1.21 28.40 2815 2815 MS2 24/44 Linfeng_122411_rIgG_5.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 2.51 0.00 1 35 100 2 675.87195 1350.73662 7.55 24.13 1779 1779 MS2 15/22 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.50 0.00 0 14 100 2 724.39630 1447.78533 7.01 29.18 2334 2334 MS2 20/32 Linfeng_20120125_PCAF_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 507 2.45 0.00 1 35 100 3 453.25204 1357.74158 6.88 38.39 4217 4217 MS2 22/44 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.44 0.00 1 42 100 3 453.25171 1357.74057 6.14 38.34 4207 4207 MS2 22/44 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 576 2.43 0.00 0 9 30 2 602.32538 1203.64348 5.50 36.11 3772 3772 MS2 16/18 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 286 2.42 0.00 0 0 100 2 799.88910 1598.77092 7.33 29.90 2797 2797 MS2 16/32 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.41 0.00 0 10 100 2 602.32587 1203.64446 6.31 35.41 3646 3646 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.39 0.00 0 9 74 2 602.32617 1203.64507 6.82 35.49 3663 3663 MS2 16/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.38 0.00 0 7 63 2 602.32635 1203.64543 7.12 35.74 3710 3710 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 284 2.37 0.00 0 20 100 2 554.27820 1107.54912 5.57 19.46 1265 1265 MS2 14/16 Linfeng_20120125_PCAF_1.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.35 0.00 1 11 100 2 675.87225 1350.73723 8.00 24.61 1648 1648 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 2.35 0.00 1 27 25 3 453.24997 1357.73536 2.29 28.89 2655 2655 MS2 21/44 Linfeng_122411_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 294 2.33 0.00 0 9 100 2 554.27869 1107.55010 6.45 19.48 1457 1457 MS2 14/16 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 490 2.32 0.00 0 16 100 2 602.32642 1203.64556 7.22 36.25 3926 3926 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.32 0.00 0 10 54 2 602.32581 1203.64433 6.21 36.17 3786 3786 MS2 15/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 366 2.31 0.00 2 5 8 3 436.88864 1308.65137 -2.24 18.37 1829 1829 MS2 21/36 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 363 2.31 0.00 2 4 3 3 436.88809 1308.64972 -3.50 18.40 1859 1859 MS2 21/36 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 282 2.31 0.00 0 15 100 2 554.27850 1107.54973 6.12 17.65 1297 1297 MS2 14/16 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 591 2.30 0.00 0 15 100 2 602.32593 1203.64458 6.41 35.32 3627 3627 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 289 2.28 0.00 0 20 100 2 554.27832 1107.54936 5.79 17.63 1128 1128 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.28 0.00 0 23 100 2 602.32629 1203.64531 7.02 35.77 4074 4074 MS2 15/18 Linfeng_20120125_PCAF_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 361 2.27 0.00 2 6 17 3 436.88849 1308.65091 -2.59 18.41 1822 1822 MS2 21/36 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.26 0.00 0 23 100 2 799.88751 1598.76775 5.34 29.80 3049 3049 MS2 21/32 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.26 0.00 0 9 100 2 602.32574 1203.64421 6.11 35.36 4397 4397 MS2 17/18 Linfeng_20120125_PCAF_1.raw Medium AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.26 0.00 0 26 25 3 369.85086 1107.53803 -4.44 21.90 2350 2350 MS2 14/32 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.26 0.00 0 15 100 2 554.27875 1107.55022 6.56 17.56 1249 1249 MS2 14/16 Linfeng_20120125_PCAF_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 509 2.25 0.00 0 27 98 2 602.32623 1203.64519 6.92 35.70 4056 4056 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.25 0.00 2 5 16 3 436.88831 1308.65036 -3.01 18.60 1866 1866 MS2 21/36 Linfeng_091311_rIgG_6.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 375 2.22 0.00 0 16 100 2 611.82239 1222.63750 4.95 31.50 3460 3460 MS2 15/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.22 0.00 0 8 44 2 602.32581 1203.64433 6.21 35.99 3756 3756 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.21 0.00 0 7 88 2 602.32623 1203.64519 6.92 35.44 3653 3653 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 286 2.21 0.00 0 8 100 2 554.27844 1107.54961 6.01 17.71 1169 1169 MS2 13/16 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 2.20 0.00 0 10 25 2 799.88184 1598.75640 -1.76 29.21 3257 3257 MS2 19/32 Linfeng_091311_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.18 0.00 0 14 100 2 602.32562 1203.64397 5.90 35.45 4419 4419 MS2 15/18 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.18 0.00 0 13 100 2 602.32605 1203.64482 6.61 35.36 3636 3636 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.17 0.00 0 11 73 2 602.32593 1203.64458 6.41 36.29 3807 3807 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 2.17 0.00 0 25 100 2 602.32654 1203.64580 7.43 35.70 3638 3638 MS2 13/18 Linfeng_20120125_PCAF_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 515 2.14 0.00 0 19 100 2 602.32623 1203.64519 6.92 35.15 3593 3593 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 509 2.14 0.00 0 33 100 2 558.30426 1115.60124 6.19 33.58 3964 3964 MS2 15/18 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.14 0.00 0 13 96 2 602.32574 1203.64421 6.11 36.36 3821 3821 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 593 2.14 0.00 0 13 100 2 602.32593 1203.64458 6.41 35.18 4354 4354 MS2 17/18 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 589 2.12 0.00 0 10 64 2 602.32581 1203.64433 6.21 36.23 3797 3797 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 2.11 0.00 0 5 100 2 799.88782 1598.76836 5.72 29.89 3158 3158 MS2 17/32 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 588 2.11 0.00 0 16 100 2 602.32599 1203.64470 6.51 35.22 3607 3607 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 392 2.09 0.00 0 21 100 2 611.82214 1222.63701 4.55 31.38 3430 3430 MS2 13/20 Linfeng_20120125_PCAF_1.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 402 2.08 0.00 1 61 100 2 679.37378 1357.74028 5.92 38.61 4255 4255 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 574 2.06 0.00 0 22 100 2 602.32587 1203.64446 6.31 36.09 3890 3890 MS2 14/18 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.05 0.00 0 30 100 2 602.32581 1203.64433 6.21 35.02 3567 3567 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 510 2.03 0.00 0 33 100 2 558.30377 1115.60027 5.31 33.42 3927 3927 MS2 16/18 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.02 0.00 0 32 100 2 602.32587 1203.64446 6.31 35.92 3855 3855 MS2 15/18 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 495 2.02 0.00 0 29 100 2 602.32623 1203.64519 6.92 35.99 3868 3868 MS2 16/18 Linfeng_20120125_PCAF_9.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 505 2.02 0.00 0 23 100 2 602.32617 1203.64507 6.82 36.39 3791 3791 MS2 14/18 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 580 2.00 0.00 0 28 100 2 602.32593 1203.64458 6.41 35.60 4032 4032 MS2 14/18 Linfeng_20120125_PCAF_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00909093.1 "cDNA FLJ51295, highly similar to Cell division cycle 5-like protein" 7.35 2 4 4 4 11.57 7.35 4 4 0.00 775 89.2 8.54 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LVLPAPQISDAELQEVVK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 197 3.51 0.00 0 14 25 3 650.36865 1949.09140 -2.09 41.34 4894 4894 MS2 39/68 Linfeng_091311_rIgG_3.raw High QLNDLWDQIEQAHLELR Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 364 3.07 0.00 0 8 25 3 707.69446 2121.06882 -1.70 44.17 5247 5247 MS2 23/64 Linfeng_091311_rIgG_3.raw High LGLLGLPAPK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 24 2.53 0.00 0 12 25 2 489.81949 978.63170 -3.06 37.13 4363 4363 MS2 17/18 Linfeng_091311_rIgG_3.raw High GVDYNAEIPFEK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 216 2.46 0.00 0 15 25 2 691.33344 1381.65959 -2.81 33.30 3869 3869 MS2 17/22 Linfeng_091311_rIgG_3.raw IPI00909890.1 "cDNA FLJ58049, highly similar to RNA-binding protein FUS" 15.15 7 3 5 15 15.48 13.29 4 4 33.36 7.69 3 11 429 44.8 9.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HDSEQDNSDNNTIFVQGLGENVTIESVADYFK Unambiguous 5 1 IPI00909890.1 CID 1.0000 0.0000 1 1 83 7.81 0.00 0 8 25 3 1195.87964 3585.62436 -0.27 48.02 5730 5730 MS2 42/124 Linfeng_091311_rIgG_4.raw High AAIDWFDGKEFSGNPIK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 349 4.38 0.00 1 2 20 3 632.31769 1894.93851 2.65 38.37 3984 3984 MS2 34/64 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 183 3.24 0.00 0 0 25 2 710.83551 1420.66374 3.24 20.89 1743 1743 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 182 3.18 0.00 0 1 25 2 710.83557 1420.66387 3.33 19.87 1633 1633 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 165 3.10 0.00 0 5 24 2 710.83167 1420.65605 -2.17 4.72 556 556 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 181 2.92 0.00 0 0 25 2 710.83557 1420.66387 3.33 16.81 1369 1369 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 186 2.87 0.00 0 1 25 2 710.83521 1420.66313 2.81 17.83 1453 1453 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 176 2.87 0.00 0 4 25 2 710.83508 1420.66289 2.64 18.85 1540 1540 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 192 2.82 0.00 0 13 25 2 710.83563 1420.66399 3.41 15.81 1287 1287 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 195 2.78 0.00 0 0 25 2 710.83545 1420.66362 3.15 14.80 1212 1212 MS2 17/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 185 2.69 0.00 0 27 25 2 710.83527 1420.66326 2.90 25.14 2327 2327 MS2 19/26 Linfeng_122411_rIgG_6.raw High LKGEATVSFDDPPSAK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 407 2.68 0.00 1 20 25 3 554.61517 1661.83097 -4.34 25.32 2791 2791 MS2 30/60 Linfeng_091311_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 162 2.65 0.00 0 0 25 2 710.82874 1420.65019 -6.30 26.57 2961 2961 MS2 20/26 Linfeng_091311_rIgG_4.raw High LKGEATVSFDDPPSAK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 409 2.53 0.00 1 8 25 3 554.61884 1661.84195 2.27 24.21 2145 2145 MS2 29/60 Linfeng_122411_rIgG_4.raw High AAIDWFDGK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 249 2.33 0.00 0 17 25 2 511.74945 1022.49162 -2.55 36.49 4273 4273 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00911038.2 apoptotic chromatin condensation inducer in the nucleus isoform 3 14.14 5 10 10 22 0.00 47.00 10.91 8 13 31.81 7.23 4 9 1301 147.3 6.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLKTEEEEEEEEEEEEDDEEEEGDDEGQK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 4 7.33 0.00 1 0 100 3 1167.11975 3499.34470 8.21 23.86 1735 1735 MS2 44/112 Linfeng_20120125_PCAF_1.raw High NLKTEEEEEEEEEEEEDDEEEEGDDEGQK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 1 6.54 0.00 1 4 25 4 875.58752 3499.32827 3.51 24.06 2014 2014 MS2 46/168 Linfeng_122411_rIgG_2.raw High NLKTEEEEEEEEEEEEDDEEEEGDDEGQKSR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 6 6.50 0.00 2 0 25 4 936.37146 3742.46401 3.98 23.04 1896 1896 MS2 51/180 Linfeng_122411_rIgG_2.raw High KcEAEEAEPPAATQPQTSETQTSHLPESER Unambiguous 3 1 IPI00911038.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 103 5.76 0.00 1 0 100 3 1113.51416 3338.52793 6.01 21.79 1467 1467 MS2 45/116 Linfeng_20120125_PCAF_1.raw High NLKTEEEEEEEEEEEEDDEEEEGDDEGQKSR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 6 5.26 0.00 2 1 25 5 749.29858 3742.46381 3.92 23.06 1899 1899 MS2 53/240 Linfeng_122411_rIgG_2.raw High AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 4.40 0.00 0 7 25 3 701.70508 2103.10068 2.98 43.30 4493 4493 MS2 35/68 Linfeng_122411_rIgG_2.raw High ASLVALPEQTASEEETPPPLLTK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 351 3.88 0.00 0 5 25 3 807.76495 2421.28031 1.77 37.14 3713 3713 MS2 29/88 Linfeng_122411_rIgG_2.raw High ASLVALPEQTASEEETPPPLLTK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 236 3.18 0.00 0 0 100 2 1211.14966 2421.29204 6.61 46.32 7019 7019 MS2 19/44 Linfeng_20120125_PCAF_1.raw High ASLVALPEQTASEEETPPPLLTK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 225 3.07 0.00 0 0 100 2 1211.14978 2421.29228 6.71 46.16 6980 6980 MS2 23/44 Linfeng_20120125_PCAF_1.raw Medium KcEAEEAEPPAATQPQTSETQTSHLPESER Unambiguous 3 1 IPI00911038.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.87 0.00 1 0 100 4 835.38818 3338.53090 6.90 21.48 1439 1439 MS2 39/174 Linfeng_20120125_PCAF_1.raw High TGTLVEEAFWIDKIK Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 365 2.69 0.00 1 18 25 3 583.98615 1749.94388 0.93 40.25 4088 4088 MS2 21/56 Linfeng_122411_rIgG_3.raw High AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 396 2.68 0.00 0 12 25 3 701.70557 2103.10215 3.68 43.18 4587 4587 MS2 23/68 Linfeng_122411_rIgG_4.raw High STLADYSAQKDLEPESDR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 201 2.68 0.00 1 13 25 3 675.65265 2024.94339 1.28 4.52 506 506 MS2 22/68 Linfeng_122411_rIgG_2.raw Medium KcEAEEAEPPAATQPQTSETQTSHLPESER Unambiguous 3 1 IPI00911038.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 99 2.65 0.00 1 5 100 4 835.38794 3338.52993 6.61 21.88 1549 1549 MS2 33/174 Linfeng_20120125_PCAF_2.raw Medium HSTPHAAFQPNSQIGEEMSQNSFIK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 171 2.59 0.00 0 13 25 4 697.08124 2785.30312 1.13 31.37 2981 2981 MS2 40/144 Linfeng_122411_rIgG_2.raw High KPSISITTESLK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 189 2.48 0.00 0 41 100 2 652.38220 1303.75713 7.91 29.39 2369 2369 MS2 15/22 Linfeng_20120125_PCAF_3.raw Medium AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 2.47 0.00 0 24 25 3 701.70465 2103.09940 2.37 43.36 4492 4492 MS2 24/68 Linfeng_122411_rIgG_3.raw High SGVSITIDDPVR Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 528 2.47 0.00 0 10 25 2 629.83612 1258.66496 0.91 30.50 2867 2867 MS2 17/22 Linfeng_122411_rIgG_2.raw Medium TGTLVEEAFWIDKIK Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 329 2.46 0.00 1 19 25 3 583.98694 1749.94626 2.29 40.13 4091 4091 MS2 27/56 Linfeng_122411_rIgG_2.raw High KPSISITTESLK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 184 2.45 0.00 0 52 100 2 652.38062 1303.75395 5.48 29.14 2895 2895 MS2 14/22 Linfeng_20120125_PCAF_1.raw High SGVSITIDDPVR Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 517 2.38 0.00 0 18 25 2 629.83649 1258.66570 1.49 30.63 2853 2853 MS2 16/22 Linfeng_122411_rIgG_3.raw High KPSISITTESLK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 187 2.03 0.00 0 69 100 2 652.38043 1303.75359 5.20 29.03 2869 2869 MS2 11/22 Linfeng_20120125_PCAF_1.raw IPI00911039.1 "cDNA FLJ54408, highly similar to Heat shock 70 kDa protein 1" 25.77 12 8 10 22 18.76 14.51 6 6 28.84 16.89 6 9 18.86 11.60 5 7 586 63.9 5.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELEQVcNPIISGLYQGAGGPGPGGFGAQGPK Unambiguous 3 1 IPI00911039.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 5.49 0.00 0 6 25 3 1019.17371 3055.50656 4.00 41.25 4344 4344 MS2 36/120 Linfeng_122411_rIgG_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 302 4.58 0.00 0 8 25 2 829.92651 1658.84575 -2.40 31.63 3641 3641 MS2 23/28 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 377 4.08 0.00 0 5 25 3 563.30670 1687.90555 2.44 36.51 3749 3749 MS2 33/60 Linfeng_122411_rIgG_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 301 3.72 0.00 0 1 25 2 829.92999 1658.85271 1.79 30.25 2948 2948 MS2 24/28 Linfeng_122411_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 437 3.62 0.00 0 21 25 3 563.30359 1687.89621 -3.10 37.66 4422 4422 MS2 30/60 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 351 3.39 0.00 0 5 100 2 844.46045 1687.91362 7.22 45.82 6271 6271 MS2 22/30 Linfeng_20120125_PCAF_4.raw High ATAGDTHLGGEDFDNR Unambiguous 17 1 IPI00911039.1 CID 1.0000 0.0000 1 1 78 3.28 0.00 0 18 25 3 559.24756 1675.72812 -1.57 23.55 2543 2543 MS2 25/60 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 349 3.15 0.00 0 12 25 2 844.45648 1687.90569 2.52 36.60 3760 3760 MS2 22/30 Linfeng_122411_rIgG_4.raw High AQIHDLVLVGGSTR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 257 2.95 0.00 0 10 100 2 733.41541 1465.82353 7.72 35.78 3917 3917 MS2 18/26 Linfeng_20120125_PCAF_4.raw High AQIHDLVLVGGSTR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 250 2.91 0.00 0 11 100 2 733.41498 1465.82268 7.13 35.97 3961 3961 MS2 21/26 Linfeng_20120125_PCAF_4.raw High DAGVIAGLNVLR Unambiguous 9 1 IPI00911039.1 CID 1.0000 0.0000 1 1 239 2.86 0.00 0 3 25 2 599.35229 1197.69731 1.87 37.97 3933 3933 MS2 20/22 Linfeng_122411_rIgG_4.raw High AQIHDLVLVGGSTR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 349 2.83 0.00 0 17 25 3 489.27451 1465.80896 -2.22 29.72 3390 3390 MS2 24/52 Linfeng_091311_rIgG_4.raw High ARFEELcSDLFR Unambiguous 5 1 IPI00911039.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 2.65 0.00 1 25 25 3 514.91840 1542.74063 2.35 35.00 3559 3559 MS2 26/44 Linfeng_122411_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 223 2.64 0.00 0 47 25 2 744.35620 1487.70513 2.56 27.93 2361 2361 MS2 17/24 Linfeng_122411_rIgG_10.raw High AQIHDLVLVGGSTR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 241 2.61 0.00 0 12 100 2 733.41547 1465.82366 7.80 35.91 3948 3948 MS2 18/26 Linfeng_20120125_PCAF_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 361 2.50 0.00 0 17 100 2 829.93396 1658.86064 6.58 35.30 3804 3804 MS2 20/28 Linfeng_20120125_PCAF_4.raw High DAGVIAGLNVLR Unambiguous 9 1 IPI00911039.1 CID 1.0000 0.0000 1 1 232 2.34 0.00 0 23 100 2 599.35516 1197.70305 6.66 47.41 6648 6648 MS2 20/22 Linfeng_20120125_PCAF_4.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 222 2.22 0.00 0 14 25 2 744.35614 1487.70500 2.48 29.24 2817 2817 MS2 19/24 Linfeng_122411_rIgG_4.raw High NALESYAFNMK Unambiguous 9 1 IPI00911039.1 CID 1.0000 0.0000 1 1 204 2.16 0.00 0 44 100 2 644.31000 1287.61272 6.89 41.43 5218 5218 MS2 15/20 Linfeng_20120125_PCAF_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 183 2.13 0.00 0 21 25 2 744.35291 1487.69853 -1.87 30.71 3523 3523 MS2 18/24 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 229 2.04 0.00 0 39 25 2 744.35632 1487.70537 2.73 27.90 2277 2277 MS2 17/24 Linfeng_122411_rIgG_9.raw IPI00917777.1 116 kDa U5 small nuclear ribonucleoprotein component isoform b 23.27 3 14 14 28 35.08 9.93 6 12 32.58 13.02 8 10 20.20 8.32 5 6 937 105.3 5.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLGENYTLEDEEDSQIcTVGR Unambiguous 3 1 IPI00917777.1 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 5.23 0.00 0 0 100 2 1214.06152 2427.11577 7.27 38.11 4164 4164 MS2 23/40 Linfeng_20120125_PCAF_2.raw High VLGENYTLEDEEDSQIcTVGR Unambiguous 3 1 IPI00917777.1 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 5.02 0.00 0 5 25 3 809.70605 2427.10361 2.26 32.98 3159 3159 MS2 39/80 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 313 4.27 0.00 0 10 25 2 993.50366 1986.00005 3.65 51.18 5489 5489 MS2 22/32 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 363 4.11 0.00 0 7 25 3 662.66943 1985.99375 0.48 52.00 6303 6303 MS2 29/64 Linfeng_091311_rIgG_2.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 323 4.07 0.00 0 52 25 2 899.95319 1798.89910 -1.13 46.37 5523 5523 MS2 24/30 Linfeng_091311_rIgG_3.raw High GHVTQDAPIPGSPLYTIK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 250 4.04 0.00 0 19 100 2 947.51282 1894.01836 6.02 38.75 4284 4284 MS2 22/34 Linfeng_20120125_PCAF_2.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 370 3.70 0.00 0 33 25 3 662.67145 1985.99979 3.52 51.05 5473 5473 MS2 32/64 Linfeng_122411_rIgG_3.raw High GHVTQDAPIPGSPLYTIK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 252 3.61 0.00 0 11 100 2 947.51367 1894.02007 6.92 39.03 4335 4335 MS2 25/34 Linfeng_20120125_PCAF_2.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 361 3.33 0.00 0 39 25 3 600.30524 1798.90116 0.02 46.45 5604 5604 MS2 26/60 Linfeng_091311_rIgG_2.raw High SIWAFGPDATGPNILVDDTLPSEVDK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 293 3.18 0.00 0 49 25 3 919.79230 2757.36234 0.16 47.39 5725 5725 MS2 27/100 Linfeng_091311_rIgG_2.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 371 3.10 0.00 0 15 25 3 662.67090 1985.99814 2.69 52.35 6229 6229 MS2 25/64 Linfeng_091311_rIgG_5.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 409 3.05 0.00 0 8 25 2 742.90814 1484.80901 3.64 48.80 5191 5191 MS2 18/22 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 374 3.01 0.00 0 30 25 3 662.66968 1985.99448 0.85 52.03 6210 6210 MS2 24/64 Linfeng_091311_rIgG_3.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 43 25 2 899.95801 1798.90874 4.23 45.27 4739 4739 MS2 16/30 Linfeng_122411_rIgG_3.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 378 2.94 0.00 0 34 25 3 600.30670 1798.90555 2.46 45.26 4738 4738 MS2 20/60 Linfeng_122411_rIgG_3.raw High IYADTFGDINYQEFAK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 208 2.87 0.00 0 16 25 2 947.94818 1894.88909 1.72 38.54 3867 3867 MS2 13/30 Linfeng_122411_rIgG_3.raw High ILAQVVGDVDTSLPR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 264 2.83 0.00 0 4 100 2 791.94580 1582.88432 2.74 48.35 6375 6375 MS2 19/28 Linfeng_20120125_PCAF_2.raw High VADPVVTFcETVVETSSLK Unambiguous 3 1 IPI00917777.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 367 2.76 0.00 0 28 25 3 694.35583 2081.05295 2.77 44.13 4592 4592 MS2 31/72 Linfeng_122411_rIgG_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 390 2.57 0.00 0 45 25 2 742.90533 1484.80339 -0.14 50.17 6002 6002 MS2 18/22 Linfeng_091311_rIgG_4.raw High STPVTVVLPDTK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 419 2.51 0.00 0 18 25 2 628.85938 1256.71147 1.41 29.31 2680 2680 MS2 17/22 Linfeng_122411_rIgG_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 400 2.49 0.00 0 30 25 2 742.90552 1484.80376 0.11 49.96 6047 6047 MS2 17/22 Linfeng_091311_rIgG_2.raw Medium AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 376 2.49 0.00 0 50 25 3 600.30493 1798.90024 -0.49 46.44 5532 5532 MS2 23/60 Linfeng_091311_rIgG_3.raw High YDWDLLAAR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 339 2.49 0.00 0 17 25 2 561.78320 1122.55913 1.11 38.44 3855 3855 MS2 15/16 Linfeng_122411_rIgG_3.raw High TLDELGIHLTK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 265 2.43 0.00 0 5 100 2 620.35486 1239.70244 6.50 40.61 4633 4633 MS2 14/20 Linfeng_20120125_PCAF_2.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 348 2.30 0.00 0 54 25 2 742.90491 1484.80254 -0.72 49.98 5978 5978 MS2 16/22 Linfeng_091311_rIgG_3.raw High YDWDLLAAR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 330 2.22 0.00 0 13 25 2 561.78082 1122.55437 -3.13 39.42 4711 4711 MS2 15/16 Linfeng_091311_rIgG_2.raw High IAVEPVNPSELPK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 281 2.22 0.00 0 23 25 2 696.88849 1392.76970 -2.64 31.74 3667 3667 MS2 16/24 Linfeng_091311_rIgG_3.raw High ILDAVVAQEPLHR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 271 2.06 0.00 0 45 100 2 730.91998 1460.83269 7.28 35.37 3639 3639 MS2 14/24 Linfeng_20120125_PCAF_2.raw IPI00925702.1 "cDNA FLJ59523, highly similar to Scaffold attachment factor B" 18.62 4 3 11 48 32.61 16.03 8 9 32.60 13.07 6 8 127.77 12.70 7 31 811 91.0 7.24 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 7.74 0.00 1 1 25 4 889.91260 3556.62856 2.42 31.92 3021 3021 MS2 64/192 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 7.49 0.00 0 0 100 3 1143.52234 3428.55246 8.02 41.99 4901 4901 MS2 43/124 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 6.66 0.00 1 10 25 4 889.90790 3556.60976 -2.86 32.78 3843 3843 MS2 55/192 Linfeng_091311_rIgG_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 117 5.90 0.00 1 1 100 4 889.91663 3556.64467 6.95 42.14 4930 4930 MS2 52/192 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 5.87 0.00 0 0 100 3 1143.52209 3428.55173 7.80 41.79 4864 4864 MS2 38/124 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 193 5.75 0.00 1 1 100 3 950.11597 2848.33335 7.48 35.16 3596 3596 MS2 41/100 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 157 5.57 0.00 1 1 12 3 950.10638 2848.30460 -2.62 30.75 3573 3573 MS2 42/100 Linfeng_091311_rIgG_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 5.23 0.00 0 0 100 3 1143.52271 3428.55356 8.34 41.81 4867 4867 MS2 40/124 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 114 5.10 0.00 1 6 100 4 889.91626 3556.64321 6.54 42.08 4919 4919 MS2 48/192 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 175 5.04 0.00 2 2 100 3 992.81439 2976.42862 7.26 33.97 3362 3362 MS2 38/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 180 4.99 0.00 2 4 100 3 992.81421 2976.42807 7.07 33.87 3344 3344 MS2 39/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 170 4.76 0.00 2 6 100 3 992.81342 2976.42569 6.27 34.05 3378 3378 MS2 34/104 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 181 4.58 0.00 2 6 100 3 992.81476 2976.42972 7.63 33.92 3353 3353 MS2 31/104 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 124 4.52 0.00 1 10 100 4 889.91724 3556.64712 7.64 42.29 4960 4960 MS2 42/192 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 188 4.31 0.00 1 0 100 3 950.11560 2848.33225 7.09 34.76 3520 3520 MS2 39/100 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 107 4.27 0.00 1 5 100 4 889.91504 3556.63833 5.17 42.47 5001 5001 MS2 43/192 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 4.26 0.00 0 0 17 4 857.88892 3428.53383 2.58 33.39 3212 3212 MS2 48/186 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 62 4.18 0.00 0 2 25 4 857.88373 3428.51308 -3.47 34.27 3994 3994 MS2 47/186 Linfeng_091311_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 4.15 0.00 0 5 100 4 857.89313 3428.55068 7.50 42.01 4906 4906 MS2 37/186 Linfeng_20120125_PCAF_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 134 4.07 0.00 0 0 100 2 1058.98694 2116.96660 7.00 29.31 2520 2520 MS2 23/38 Linfeng_20120125_PCAF_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 130 4.05 0.00 0 0 25 2 1058.98328 2116.95928 3.54 27.49 2441 2441 MS2 21/38 Linfeng_122411_rIgG_3.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 152 4.05 0.00 0 7 25 3 706.32434 2116.95847 3.15 27.44 2434 2434 MS2 35/76 Linfeng_122411_rIgG_3.raw High SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 179 4.00 0.00 2 6 100 3 992.81409 2976.42771 6.95 33.71 3315 3315 MS2 34/104 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 3.91 0.00 0 8 100 4 857.89307 3428.55044 7.42 41.76 4857 4857 MS2 41/186 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 3.81 0.00 1 0 100 4 889.91693 3556.64589 7.29 42.00 4904 4904 MS2 47/192 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 3.71 0.00 1 20 100 2 867.91797 1734.82866 7.49 34.32 3435 3435 MS2 18/28 Linfeng_20120125_PCAF_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 195 3.57 0.00 1 7 100 3 950.11646 2848.33481 7.99 35.05 4326 4326 MS2 32/100 Linfeng_20120125_PCAF_1.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.50 0.00 0 9 100 4 857.89276 3428.54922 7.07 41.81 4866 4866 MS2 43/186 Linfeng_20120125_PCAF_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 120 3.46 0.00 0 18 25 3 706.32013 2116.94583 -2.81 29.23 3367 3367 MS2 32/76 Linfeng_091311_rIgG_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.41 0.00 1 4 25 3 578.94489 1734.82010 2.55 28.32 2549 2549 MS2 29/56 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 94 3.39 0.00 0 8 100 4 857.89301 3428.55019 7.35 42.25 4953 4953 MS2 41/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 96 3.37 0.00 0 7 100 4 857.89331 3428.55141 7.71 42.13 4929 4929 MS2 38/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.34 0.00 0 10 100 4 857.89246 3428.54799 6.71 41.90 4885 4885 MS2 43/186 Linfeng_20120125_PCAF_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.31 0.00 0 81 100 4 857.89270 3428.54897 7.00 41.71 4847 4847 MS2 38/186 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 3.27 0.00 1 18 25 3 578.94171 1734.81058 -2.94 29.69 3430 3430 MS2 27/56 Linfeng_091311_rIgG_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 129 3.11 0.00 1 6 100 4 889.91748 3556.64809 7.91 42.26 4955 4955 MS2 37/192 Linfeng_20120125_PCAF_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.06 0.00 1 3 25 5 712.13104 3556.62611 1.73 32.02 3034 3034 MS2 51/256 Linfeng_122411_rIgG_3.raw High NFWVSGLSSTTR Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 321 3.04 0.00 0 7 25 2 677.84222 1354.67717 1.57 34.69 3377 3377 MS2 18/22 Linfeng_122411_rIgG_3.raw Medium SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 162 2.99 0.00 2 14 25 4 744.85962 2976.41665 3.23 27.45 2436 2436 MS2 32/156 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 270 2.93 0.00 1 31 100 2 867.91931 1734.83135 9.03 34.46 3462 3462 MS2 17/28 Linfeng_20120125_PCAF_2.raw Medium LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 2.91 0.00 0 4 100 4 857.89355 3428.55239 7.99 42.17 4935 4935 MS2 40/186 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 2.55 0.00 1 13 100 3 578.94745 1734.82779 6.98 34.11 3391 3391 MS2 25/56 Linfeng_20120125_PCAF_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 219 2.53 0.00 1 10 25 3 578.94226 1734.81223 -1.99 29.73 3398 3398 MS2 21/56 Linfeng_091311_rIgG_3.raw Medium SKDQDDQKPGPSER Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 193 2.47 0.00 1 16 25 3 529.58466 1586.73941 -0.74 3.43 329 329 MS2 22/52 Linfeng_091311_rIgG_2.raw Medium KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 2.30 0.00 1 32 100 3 578.94702 1734.82651 6.25 34.71 3512 3512 MS2 22/56 Linfeng_20120125_PCAF_2.raw High ILDILGETcK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 434 2.26 0.00 0 11 14 2 581.31024 1161.61321 -4.51 35.31 4175 4175 MS2 16/18 Linfeng_091311_rIgG_2.raw High REPAEQPGDGER Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 2.21 0.00 1 16 25 2 670.81232 1340.61736 -1.23 13.33 1143 1143 MS2 16/22 Linfeng_091311_rIgG_2.raw High ADSLLAVVK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 563 2.04 0.00 0 19 100 2 458.28210 915.55693 6.47 36.78 3904 3904 MS2 15/16 Linfeng_20120125_PCAF_2.raw IPI00927500.1 Isoform 3 of Transformer-2 protein homolog beta 42.55 7 6 6 13 22.66 34.04 5 8 20.07 31.91 4 5 188 21.9 10.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YGPIADVSIVYDQQSR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 295 4.70 0.00 0 19 25 2 905.95190 1810.89653 -0.29 35.62 3687 3687 MS2 21/30 Linfeng_122411_rIgG_6.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.34 0.00 0 5 25 3 795.37463 2384.10935 3.49 43.05 4617 4617 MS2 35/80 Linfeng_122411_rIgG_6.raw High YGPIADVSIVYDQQSR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 339 4.27 0.00 0 25 25 3 604.30365 1810.89640 -0.37 35.63 3688 3688 MS2 32/60 Linfeng_122411_rIgG_6.raw High GFAFVYFENVDDAK Unambiguous 5 1 IPI00927500.1 CID 1.0000 0.0000 1 1 175 3.89 0.00 0 30 25 2 811.38330 1621.75932 3.67 41.42 4410 4410 MS2 21/26 Linfeng_122411_rIgG_6.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 3.69 0.00 0 27 25 3 795.36987 2384.09507 -2.51 44.22 5223 5223 MS2 30/80 Linfeng_091311_rIgG_6.raw High GFAFVYFENVDDAK Unambiguous 5 1 IPI00927500.1 CID 1.0000 0.0000 1 1 160 3.54 0.00 0 23 25 2 811.37939 1621.75151 -1.15 42.56 5009 5009 MS2 20/26 Linfeng_091311_rIgG_7.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 3.20 0.00 0 21 25 3 795.37067 2384.09745 -1.51 44.27 5224 5224 MS2 24/80 Linfeng_091311_rIgG_7.raw High IRVDFSITK Unambiguous 7 1 IPI00927500.1 CID 1.0000 0.0000 1 1 247 2.88 0.00 1 5 25 3 360.21381 1078.62687 1.20 29.08 2852 2852 MS2 23/32 Linfeng_122411_rIgG_6.raw High AAQDRDQIYR Unambiguous 6 1 IPI00927500.1 CID 1.0000 0.0000 1 1 317 2.64 0.00 1 33 25 3 412.54150 1235.60996 -2.28 17.51 1715 1715 MS2 14/36 Linfeng_091311_rIgG_6.raw High GYDDRDYYSR Unambiguous 7 1 IPI00927500.1 CID 1.0000 0.0000 1 1 41 2.56 0.00 1 16 25 3 437.18509 1309.54071 -2.81 21.51 2266 2266 MS2 14/36 Linfeng_091311_rIgG_6.raw Medium AAQDRDQIYR Unambiguous 6 1 IPI00927500.1 CID 1.0000 0.0000 1 1 306 2.44 0.00 1 42 25 3 412.54160 1235.61023 -2.05 17.40 1667 1667 MS2 14/36 Linfeng_091311_rIgG_7.raw Medium IRVDFSITK Unambiguous 7 1 IPI00927500.1 CID 1.0000 0.0000 1 1 294 2.30 0.00 1 48 25 3 360.21210 1078.62174 -3.55 30.49 3466 3466 MS2 20/32 Linfeng_091311_rIgG_7.raw Medium GYDDRDYYSR Unambiguous 7 1 IPI00927500.1 CID 1.0000 0.0000 1 1 37 2.29 0.00 1 29 25 3 437.18469 1309.53952 -3.72 21.57 2245 2245 MS2 15/36 Linfeng_091311_rIgG_7.raw IPI00927677.1 34 kDa protein 36.79 8 13 13 33 61.22 27.99 9 18 31.62 21.38 6 9 16.32 12.89 3 6 318 34.5 9.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 350 4.47 0.00 0 13 25 2 885.94702 1770.88677 -2.36 43.34 5115 5115 MS2 26/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 351 4.43 0.00 0 21 25 2 885.94714 1770.88701 -2.22 43.39 5114 5114 MS2 25/30 Linfeng_091311_rIgG_7.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 28 4.41 0.00 0 3 14 3 637.60101 1910.78849 -0.81 4.38 481 481 MS2 42/84 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 352 4.20 0.00 1 3 6 3 628.32135 1882.94950 -2.71 32.20 3702 3702 MS2 35/60 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 4.19 0.00 0 0 25 2 955.89575 1910.78423 -3.04 23.08 2480 2480 MS2 27/42 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 4.09 0.00 0 2 7 2 955.89880 1910.79033 0.15 4.35 478 478 MS2 31/42 Linfeng_122411_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 28 3.89 0.00 0 40 25 3 637.60254 1910.79306 1.58 22.12 1924 1924 MS2 40/84 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 319 3.88 0.00 1 15 25 2 941.97852 1882.94975 -2.57 32.25 3709 3709 MS2 22/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 355 3.81 0.00 0 22 25 2 885.95142 1770.89556 2.61 42.20 4509 4509 MS2 25/30 Linfeng_122411_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 27 3.77 0.00 0 14 25 3 637.59955 1910.78409 -3.11 23.13 2487 2487 MS2 40/84 Linfeng_091311_rIgG_6.raw High YGKIETIEVMEDR Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 286 3.66 0.00 1 23 25 3 528.26440 1582.77866 0.28 29.16 2863 2863 MS2 26/48 Linfeng_122411_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 19 3.65 0.00 0 0 25 2 955.89581 1910.78435 -2.98 23.16 2465 2465 MS2 28/42 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 350 3.65 0.00 1 7 25 3 628.32135 1882.94950 -2.71 32.28 3704 3704 MS2 34/60 Linfeng_091311_rIgG_7.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 3.58 0.00 0 5 25 2 955.90088 1910.79448 2.32 22.09 1920 1920 MS2 27/42 Linfeng_122411_rIgG_6.raw High RGEEGHDPKEPEQLR Unambiguous 4 1 IPI00927677.1 CID 1.0000 0.0000 1 1 311 3.45 0.00 2 8 13 4 444.96982 1776.85744 -2.81 16.35 1554 1554 MS2 35/84 Linfeng_091311_rIgG_6.raw High KLFIGGLSFETTDDSLREHFEK Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 348 3.28 0.00 2 3 25 4 643.07727 2569.28725 -2.40 37.59 4396 4396 MS2 32/126 Linfeng_091311_rIgG_6.raw High KIFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 344 3.27 0.00 2 3 25 3 671.01978 2011.04477 -2.39 29.60 3359 3359 MS2 32/64 Linfeng_091311_rIgG_6.raw High KLFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 434 3.20 0.00 1 3 25 3 633.66846 1898.99082 2.58 38.50 4048 4048 MS2 26/64 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 343 3.17 0.00 0 41 25 2 885.94708 1770.88689 -2.29 44.39 5246 5246 MS2 20/30 Linfeng_091311_rIgG_6.raw High GFAFVTFDDHDTVDK Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 135 3.12 0.00 0 17 100 2 857.39703 1713.78679 6.55 47.00 6750 6750 MS2 21/28 Linfeng_20120125_PCAF_6.raw Medium LFIGGLSFETTDDSLREHFEK Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 305 2.93 0.00 1 7 20 4 611.05383 2441.19350 -2.02 40.12 4714 4714 MS2 37/120 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 27 2.90 0.00 0 12 25 3 637.59943 1910.78373 -3.31 23.19 2469 2469 MS2 28/84 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 320 2.87 0.00 1 20 13 3 628.32385 1882.95700 1.28 31.25 3136 3136 MS2 31/60 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 349 2.85 0.00 1 16 100 3 628.32745 1882.96781 7.01 39.58 4956 4956 MS2 29/60 Linfeng_20120125_PCAF_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 346 2.72 0.00 1 34 100 2 941.98956 1882.97185 9.16 39.48 4934 4934 MS2 18/30 Linfeng_20120125_PCAF_6.raw High GFAFVTFDDHDTVDK Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 149 2.66 0.00 0 12 100 2 857.39783 1713.78838 7.47 46.30 6582 6582 MS2 19/28 Linfeng_20120125_PCAF_6.raw High IETIEVMEDR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 342 2.66 0.00 0 20 100 2 617.80719 1234.60710 7.01 33.49 3545 3545 MS2 16/18 Linfeng_20120125_PCAF_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 374 2.65 0.00 0 15 25 3 590.96741 1770.88767 -1.85 43.45 5129 5129 MS2 28/60 Linfeng_091311_rIgG_6.raw High KLFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 382 2.50 0.00 1 32 25 3 633.66553 1898.98203 -2.04 39.20 4599 4599 MS2 26/64 Linfeng_091311_rIgG_6.raw High EDSVKPGAHLTVK Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 364 2.47 0.00 0 0 25 2 690.87708 1380.74687 -0.98 19.08 1932 1932 MS2 18/24 Linfeng_091311_rIgG_6.raw Medium LFIGGLSFETTDDSLREHFEK Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 297 2.33 0.00 1 17 25 3 814.40302 2441.19449 -1.62 40.25 4730 4730 MS2 26/80 Linfeng_091311_rIgG_6.raw High GFAFVTFDDHDTVDK Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 132 2.30 0.00 0 11 100 2 857.39636 1713.78545 5.76 47.12 6779 6779 MS2 16/28 Linfeng_20120125_PCAF_6.raw High EDTEEYNLR Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 102 2.09 0.00 0 5 25 2 584.76129 1168.51531 3.08 16.77 1348 1348 MS2 14/16 Linfeng_122411_rIgG_6.raw IPI00937477.1 WD repeat-containing protein 43 19.20 1 9 9 13 14.47 9.90 5 5 13.03 10.34 5 5 7.20 6.06 3 3 677 74.8 5.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SGGNEVSIEER Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 189 3.23 0.00 0 5 25 2 588.77704 1176.54680 -2.02 20.79 2159 2159 MS2 17/20 Linfeng_091311_rIgG_4.raw High LILLITQVTASEK Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 44 3.04 0.00 0 14 25 2 714.93964 1428.87200 3.31 39.04 4068 4068 MS2 21/24 Linfeng_122411_rIgG_4.raw High MSLLLVYGSWFQPTIER Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 392 3.03 0.00 0 23 25 3 680.69202 2040.06150 -0.43 51.25 6133 6133 MS2 23/64 Linfeng_091311_rIgG_4.raw High GDNSSVSSLcISPDGK Unambiguous 1 1 IPI00937477.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 114 2.94 0.00 0 33 25 2 811.86829 1622.72930 -2.11 28.50 3225 3225 MS2 19/30 Linfeng_091311_rIgG_4.raw High MPLHTIIPLLQELTK Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 125 2.79 0.00 0 22 25 3 583.01050 1747.01694 -1.02 46.37 5520 5520 MS2 25/56 Linfeng_091311_rIgG_4.raw High STPKPIPILAAGFcSDK Unambiguous 1 1 IPI00937477.1 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 2.70 0.00 0 31 100 3 601.32678 1801.96579 7.78 46.45 6110 6110 MS2 25/64 Linfeng_20120125_PCAF_3.raw High GDNSSVSSLcISPDGK Unambiguous 1 1 IPI00937477.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 116 2.67 0.00 0 4 25 2 811.87183 1622.73638 2.26 26.29 2424 2424 MS2 19/30 Linfeng_122411_rIgG_4.raw Medium LHQEYVPSAHLSGTcTcLAWAPAR Unambiguous 1 1 IPI00937477.1 C15(Carbamidomethyl); C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 228 2.63 0.00 0 15 25 4 682.08167 2725.30483 2.71 31.11 3061 3061 MS2 35/138 Linfeng_122411_rIgG_4.raw High LLNVWQVR Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 318 2.59 0.00 0 5 25 2 514.30731 1027.60735 2.51 34.43 3490 3490 MS2 13/14 Linfeng_122411_rIgG_4.raw High LLNVWQVR Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 209 2.47 0.00 0 7 25 2 514.30438 1027.60149 -3.20 35.74 4178 4178 MS2 13/14 Linfeng_091311_rIgG_4.raw High GDNSSVSSLcISPDGK Unambiguous 1 1 IPI00937477.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 129 2.46 0.00 0 44 100 2 811.87506 1622.74285 6.24 26.54 1888 1888 MS2 17/30 Linfeng_20120125_PCAF_3.raw High DISNcWAPK Unambiguous 1 1 IPI00937477.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 162 2.10 0.00 0 13 25 2 545.75385 1090.50041 1.61 27.07 2527 2527 MS2 13/16 Linfeng_122411_rIgG_4.raw High LLNVWQVR Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 212 2.03 0.00 0 39 100 2 514.30963 1027.61199 7.02 45.30 5833 5833 MS2 13/14 Linfeng_20120125_PCAF_3.raw IPI00939362.1 Putative uncharacterized protein S100A9 64.56 2 4 4 11 19.67 45.57 3 7 10.37 54.43 3 4 79 9.4 5.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NIETIINTFHQYSVK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 359 4.23 0.00 0 15 18 2 903.96918 1806.93108 -4.12 41.01 4973 4973 MS2 21/28 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 339 3.17 0.00 0 10 4 3 485.91089 1455.71811 -3.17 24.22 2724 2724 MS2 27/48 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 369 3.06 0.00 0 7 100 3 485.91519 1455.73102 5.70 21.52 1442 1442 MS2 26/48 Linfeng_20120125_PCAF_1.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 340 3.01 0.00 0 19 12 3 485.91098 1455.71839 -2.98 24.33 2624 2624 MS2 26/48 Linfeng_091311_rIgG_9.raw High NIETIINTFHQYSVK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 388 2.77 0.00 0 4 65 2 903.97595 1806.94463 3.38 55.24 7038 7038 MS2 18/28 Linfeng_20120125_PCAF_2.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 339 2.58 0.00 0 42 25 3 485.91098 1455.71839 -2.98 24.51 2676 2676 MS2 24/48 Linfeng_091311_rIgG_6.raw High VIEHIMEDLDTNADK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 238 2.45 0.00 0 25 100 2 871.92297 1742.83867 6.91 41.29 5807 5807 MS2 16/28 Linfeng_20120125_PCAF_1.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 334 2.28 0.00 0 0 25 2 728.36316 1455.71904 -2.53 24.24 2727 2727 MS2 16/24 Linfeng_091311_rIgG_10.raw High KDLQNFLK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 412 2.25 0.00 1 13 25 2 503.28708 1005.56688 -5.89 27.49 3184 3184 MS2 13/14 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 318 2.15 0.00 0 10 25 2 728.36334 1455.71941 -2.28 24.35 2627 2627 MS2 15/24 Linfeng_091311_rIgG_9.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 316 2.09 0.00 0 3 100 2 728.36877 1455.73027 5.18 21.55 1445 1445 MS2 15/24 Linfeng_20120125_PCAF_1.raw IPI00940014.1 55 kDa protein 25.55 2 6 9 15 12.73 12.57 5 5 17.77 15.17 5 6 13.31 9.78 3 4 501 55.1 9.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VAYIPDEMAAQQNPLQQPR Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 318 4.06 0.00 0 0 100 2 1085.04956 2169.09184 7.39 40.22 4934 4934 MS2 20/36 Linfeng_20120125_PCAF_4.raw High TVNELQNLSSAEVVVPR Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 292 3.55 0.00 0 9 100 2 928.00623 1855.00517 7.07 43.02 5590 5590 MS2 23/32 Linfeng_20120125_PCAF_4.raw High LLVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00940014.1 CID 1.0000 0.0000 1 1 48 3.54 0.00 0 9 25 3 485.97083 1455.89792 3.08 45.22 4845 4845 MS2 29/52 Linfeng_122411_rIgG_4.raw High SITILSTPEGTSAAcK Unambiguous 2 1 IPI00940014.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 3.17 0.00 0 7 25 2 818.41870 1635.83013 2.59 28.87 2768 2768 MS2 21/30 Linfeng_122411_rIgG_4.raw High TVNELQNLSSAEVVVPR Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 278 3.10 0.00 0 18 100 2 928.00629 1855.00530 7.14 43.22 5639 5639 MS2 21/32 Linfeng_20120125_PCAF_4.raw High SITILSTPEGTSAAcK Unambiguous 2 1 IPI00940014.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.01 0.00 0 7 25 2 818.41522 1635.82317 -1.66 30.56 3502 3502 MS2 20/30 Linfeng_091311_rIgG_4.raw High ITISPLQELTLYNPER Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 308 3.00 0.00 0 14 25 2 944.01782 1887.02837 3.23 42.86 4547 4547 MS2 14/30 Linfeng_122411_rIgG_4.raw High TVNELQNLSSAEVVVPR Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 337 2.98 0.00 0 26 25 3 619.00391 1854.99717 2.76 35.09 3571 3571 MS2 28/64 Linfeng_122411_rIgG_4.raw High ITISPLQELTLYNPER Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 318 2.92 0.00 0 9 25 3 629.68182 1887.03092 4.58 42.84 4545 4545 MS2 26/60 Linfeng_122411_rIgG_4.raw High DQTPDENDQVVVK Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 207 2.80 0.00 0 12 25 2 743.85352 1486.69975 -1.55 22.72 2427 2427 MS2 18/24 Linfeng_091311_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00940014.1;IPI00922068.1 CID 1.0000 0.0000 1 1 439 2.60 0.00 0 7 100 2 715.89459 1430.78191 7.43 41.55 5246 5246 MS2 15/24 Linfeng_20120125_PCAF_4.raw High ALQSGPPQSR Unambiguous 2 1 IPI00940014.1 CID 1.0000 0.0000 1 1 331 2.56 0.00 0 35 25 2 520.77686 1040.54643 -1.87 16.33 1530 1530 MS2 13/18 Linfeng_091311_rIgG_4.raw Medium ILAHNNFVGR Unambiguous 4 2 IPI00008557.6;IPI00940014.1 CID 1.0000 0.0000 1 1 290 2.31 0.00 0 8 25 3 380.87949 1140.62390 -2.98 22.53 2400 2400 MS2 17/36 Linfeng_091311_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00940014.1;IPI00922068.1 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw High LLVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00940014.1 CID 1.0000 0.0000 1 1 45 2.04 0.00 0 53 25 2 728.45081 1455.89433 0.61 46.38 5521 5521 MS2 19/26 Linfeng_091311_rIgG_4.raw IPI00940685.1 U5 small nuclear ribonucleoprotein 40 kDa protein 18.21 2 4 4 7 11.47 18.21 4 4 8.58 15.41 3 3 357 39.3 8.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LPGHAGSINEVAFHPDEPIIISASSDKR Unambiguous 1 1 IPI00940685.1 CID 1.0000 0.0000 1 1 288 3.78 0.00 1 12 22 5 592.30609 2957.50135 -3.50 32.74 3773 3773 MS2 65/216 Linfeng_091311_rIgG_6.raw High LPGHAGSINEVAFHPDEPIIISASSDKR Unambiguous 1 1 IPI00940685.1 CID 1.0000 0.0000 1 1 294 3.68 0.00 1 19 25 5 592.30878 2957.51478 1.04 32.04 3238 3238 MS2 51/216 Linfeng_122411_rIgG_6.raw High GPQLVcTGSDDGTVK Unambiguous 2 1 IPI00940685.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.73 0.00 0 6 25 2 767.36255 1533.71782 -2.35 24.55 2681 2681 MS2 20/28 Linfeng_091311_rIgG_6.raw High TVAVWDSETGER Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 187 2.49 0.00 0 12 25 2 675.31830 1349.62932 -2.91 28.41 3202 3202 MS2 17/22 Linfeng_091311_rIgG_6.raw High FVYVWDTTSR Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 254 2.47 0.00 0 26 25 2 637.31250 1273.61772 -2.73 36.16 4213 4213 MS2 16/18 Linfeng_091311_rIgG_6.raw High GPQLVcTGSDDGTVK Unambiguous 2 1 IPI00940685.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 2.45 0.00 0 24 25 2 767.36682 1533.72637 3.22 20.82 1759 1759 MS2 17/28 Linfeng_122411_rIgG_6.raw High TVAVWDSETGER Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 213 2.44 0.00 0 9 25 2 675.32141 1349.63555 1.70 26.93 2566 2566 MS2 17/22 Linfeng_122411_rIgG_6.raw IPI00940851.1 ELAV-like protein 1 34.66 2 10 10 18 22.54 28.83 7 8 28.97 31.29 9 10 0.00 326 36.1 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEAEEAITSFNGHKPPGSSEPITVK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 308 4.89 0.00 0 3 25 3 871.43091 2612.27817 -2.22 29.99 3396 3396 MS2 35/96 Linfeng_091311_rIgG_7.raw High SLFSSIGEVESAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 334 3.31 0.00 0 13 25 2 677.34882 1353.69036 0.48 35.88 3720 3720 MS2 20/24 Linfeng_122411_rIgG_6.raw High SLFSSIGEVESAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 385 3.29 0.00 0 37 25 2 677.35004 1353.69280 2.29 34.21 2944 2944 MS2 20/24 Linfeng_122411_rIgG_7.raw High NVALLSQLYHSPAR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 331 3.26 0.00 0 1 25 2 784.93304 1568.85881 2.81 33.21 3387 3387 MS2 19/26 Linfeng_122411_rIgG_6.raw High VAGHSLGYGFVNYVTAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 385 3.25 0.00 0 6 25 3 594.97858 1782.92118 2.12 33.40 3411 3411 MS2 31/64 Linfeng_122411_rIgG_6.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 536 3.16 0.00 0 19 25 2 594.83276 1188.65825 -0.07 24.04 2175 2175 MS2 18/20 Linfeng_122411_rIgG_6.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 496 3.13 0.00 0 2 18 2 594.82996 1188.65264 -4.79 26.05 2858 2858 MS2 19/20 Linfeng_091311_rIgG_7.raw High LGDKILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 169 2.98 0.00 1 18 25 3 416.58432 1247.73841 2.04 31.57 3178 3178 MS2 22/40 Linfeng_122411_rIgG_6.raw High NVALLSQLYHSPAR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 318 2.63 0.00 0 6 25 2 784.92822 1568.84917 -3.34 34.37 3972 3972 MS2 19/26 Linfeng_091311_rIgG_7.raw Medium SEAEEAITSFNGHKPPGSSEPITVK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 334 2.61 0.00 0 7 25 4 653.82782 2612.28945 2.10 28.99 2839 2839 MS2 42/144 Linfeng_122411_rIgG_6.raw Medium DKVAGHSLGYGFVNYVTAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 380 2.58 0.00 1 24 25 4 507.26544 2026.03994 0.30 32.58 3308 3308 MS2 36/108 Linfeng_122411_rIgG_6.raw High DANLYISGLPR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 473 2.55 0.00 0 31 25 2 609.82330 1218.63933 -6.92 35.28 4089 4089 MS2 18/20 Linfeng_091311_rIgG_7.raw High VAGHSLGYGFVNYVTAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 402 2.54 0.00 0 18 19 3 594.97546 1782.91184 -3.12 34.22 3953 3953 MS2 32/64 Linfeng_091311_rIgG_7.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 495 2.50 0.00 0 13 25 2 594.83002 1188.65276 -4.69 26.16 2900 2900 MS2 17/20 Linfeng_091311_rIgG_6.raw High AINTLNGLR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 324 2.47 0.00 0 17 25 2 486.28479 971.56230 -1.03 24.84 2286 2286 MS2 15/16 Linfeng_122411_rIgG_6.raw High AINTLNGLR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 470 2.17 0.00 0 7 25 2 486.28192 971.55657 -6.93 26.93 2978 2978 MS2 15/16 Linfeng_091311_rIgG_7.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 138 2.13 0.00 0 18 25 2 417.75668 834.50609 -2.77 30.80 3508 3508 MS2 11/12 Linfeng_091311_rIgG_7.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 131 2.06 0.00 0 7 25 2 417.75882 834.51036 2.35 29.26 2876 2876 MS2 11/12 Linfeng_122411_rIgG_6.raw IPI00940901.1 Isoform 2 of RRP12-like protein 7.18 3 5 5 6 19.06 7.18 5 6 0.00 1197 132.6 8.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NFLPILFNLYGQPVAAGDTPAPR Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 271 4.29 0.00 0 13 25 3 824.44067 2471.30747 -0.32 49.50 5989 5989 MS2 37/88 Linfeng_091311_rIgG_2.raw High NFLPILFNLYGQPVAAGDTPAPR Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 271 4.15 0.00 0 33 25 3 824.44281 2471.31388 2.27 49.60 5930 5930 MS2 28/88 Linfeng_091311_rIgG_3.raw High LSVLDLVVALAPcADEAAISK Unambiguous 3 1 IPI00940901.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 252 2.85 0.00 0 6 25 3 719.06293 2155.17423 2.89 54.73 6593 6593 MS2 33/80 Linfeng_091311_rIgG_2.raw High APAHHPAAISTAK Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 408 2.77 0.00 0 0 25 3 424.56503 1271.68055 -3.94 12.55 1038 1038 MS2 24/48 Linfeng_091311_rIgG_2.raw High EFITALIPEVILcTK Unambiguous 3 1 IPI00940901.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 288 2.60 0.00 0 10 25 3 582.99597 1746.97336 1.29 51.07 6186 6186 MS2 24/56 Linfeng_091311_rIgG_2.raw Medium EIcAVLAAVTEVIR Unambiguous 3 1 IPI00940901.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 2.40 0.00 0 15 25 3 515.28839 1543.85062 -0.46 49.23 5955 5955 MS2 26/52 Linfeng_091311_rIgG_2.raw IPI00940972.1 Histone deacetylase complex subunit SAP18 32.03 3 3 3 3 7.53 32.03 3 3 153 17.5 9.35 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GTHFNFAIVFTDVK Unambiguous 3 1 IPI00940972.1 CID 1.0000 0.0000 1 1 387 2.74 0.00 0 15 25 3 532.61072 1595.81760 -2.58 40.48 4748 4748 MS2 25/52 Linfeng_091311_rIgG_9.raw Medium FQIGDYLDIAITPPNR Unambiguous 3 1 IPI00940972.1 CID 1.0000 0.0000 1 1 404 2.48 0.00 0 17 25 3 611.65521 1832.95108 -1.70 46.01 5442 5442 MS2 27/60 Linfeng_091311_rIgG_9.raw Medium GNVPSSELQIYTWMDATLK Unambiguous 3 1 IPI00940972.1 CID 1.0000 0.0000 1 1 315 2.31 0.00 0 30 25 3 718.35602 2153.05350 -2.29 47.02 5568 5568 MS2 24/72 Linfeng_091311_rIgG_9.raw IPI00942498.1 Histone H3 (Fragment) 41.12 1 2 3 3 11.67 41.12 3 3 0.00 107 12.1 10.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSAAIGALQEASEAYLVNLFEDTNLcAIHAK Unambiguous 1 1 IPI00942498.1 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 247 4.71 0.00 0 32 25 4 874.43774 3494.72915 0.84 54.46 6615 6615 MS2 39/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVNLFEDTNLcAIHAKR Unambiguous 1 1 IPI00942498.1 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 4.49 0.00 1 21 25 4 913.46405 3650.83437 1.93 52.71 6433 6433 MS2 41/192 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw IPI00942512.1 "keratin, type II cytoskeletal 3" 20.22 3 2 15 99 82.62 9.08 7 38 69.80 10.99 9 26 90.49 12.74 7 35 628 64.4 6.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVR Unambiguous 2 1 IPI00942512.1 CID 1.0000 0.0000 1 1 475 3.66 0.00 0 24 25 2 665.86633 1330.72539 3.04 44.33 4374 4374 MS2 19/22 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High TLYDAELSQMQSHISDTSVVLSMDNNR Unambiguous 2 1 IPI00942512.1 CID 1.0000 0.0000 1 1 155 3.16 0.00 0 10 100 3 1018.81573 3054.43265 5.97 44.92 5580 5580 MS2 25/104 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 3.06 0.00 1 7 100 2 675.87073 1350.73418 5.74 25.30 1879 1879 MS2 18/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 358 2.79 0.00 1 1 100 2 675.87115 1350.73503 6.38 24.63 1795 1795 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.77 0.00 1 2 100 2 738.90216 1476.79704 -5.88 27.08 2127 2127 MS2 15/22 Linfeng_20120125_PCAF_2.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 2.76 0.00 1 13 100 2 675.87152 1350.73577 6.92 23.81 1565 1565 MS2 15/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.75 0.00 1 8 100 2 675.87079 1350.73430 5.83 23.62 1688 1688 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High TLYDAELSQMQSHISDTSVVLSMDNNR Unambiguous 2 1 IPI00942512.1 CID 1.0000 0.0000 1 1 168 2.71 0.00 0 19 100 3 1018.81763 3054.43833 7.83 44.59 5502 5502 MS2 26/104 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.64 0.00 1 4 100 2 675.87225 1350.73723 8.00 24.58 1644 1644 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 363 2.59 0.00 1 29 100 2 675.87109 1350.73491 6.29 23.69 1707 1707 MS2 14/22 Linfeng_20120125_PCAF_1.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 409 2.52 0.00 1 24 100 2 675.87201 1350.73674 7.64 24.06 1767 1767 MS2 15/22 Linfeng_20120125_PCAF_1.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 2.51 0.00 1 35 100 2 675.87195 1350.73662 7.55 24.13 1779 1779 MS2 15/22 Linfeng_20120125_PCAF_1.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 187 2.47 0.00 0 3 18 2 570.27686 1139.54643 5.49 32.80 3776 3776 MS2 13/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.35 0.00 1 11 100 2 675.87225 1350.73723 8.00 24.61 1648 1648 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw Medium FLEQQNKVLETK Unambiguous 11 6 IPI00005859.5;IPI00008359.1;IPI00477227.3;IPI00241841.10;IPI00942512.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.28 0.00 1 8 25 3 492.94006 1476.80564 -0.06 22.92 2034 2034 MS2 19/44 Linfeng_122411_rIgG_6.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 414 2.26 0.00 2 6 100 2 597.81274 1194.61821 5.73 14.55 918 918 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 375 2.22 0.00 0 16 100 2 611.82239 1222.63750 4.95 31.50 3460 3460 MS2 15/20 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 392 2.09 0.00 0 21 100 2 611.82214 1222.63701 4.55 31.38 3430 3430 MS2 13/20 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00947128.1 Isoform 2 of UAP56-interacting factor 21.58 4 5 5 7 7.71 13.01 3 3 9.89 15.75 4 4 292 33.0 11.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RPNGVITGLAAR Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 165 3.02 0.00 0 19 25 3 408.91144 1224.71976 2.09 20.61 1734 1734 MS2 22/44 Linfeng_122411_rIgG_6.raw High VQAQLNTEQLLDDVVAK Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 429 2.93 0.00 0 22 25 3 628.67230 1884.00235 -2.66 41.30 4860 4860 MS2 28/64 Linfeng_091311_rIgG_6.raw High LLQQSGAQQFR Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 446 2.65 0.00 0 32 25 2 638.34497 1275.68266 1.73 20.56 1728 1728 MS2 17/20 Linfeng_122411_rIgG_6.raw High LLQQSGAQQFR Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 412 2.65 0.00 0 7 25 2 638.34204 1275.67681 -2.87 24.43 2665 2665 MS2 16/20 Linfeng_091311_rIgG_6.raw High NIEQYFPVLK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 359 2.20 0.00 0 4 25 2 625.84412 1250.68096 2.37 39.47 4168 4168 MS2 13/18 Linfeng_122411_rIgG_6.raw High NIEQYFPVLK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 362 2.13 0.00 0 9 25 2 625.84131 1250.67534 -2.12 40.59 4771 4771 MS2 15/18 Linfeng_091311_rIgG_6.raw High GVPLQFDINSVGK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 367 2.02 0.00 0 7 25 2 687.37543 1373.74358 0.85 35.99 3734 3734 MS2 19/24 Linfeng_122411_rIgG_6.raw IPI00954159.1 Isoform 1 of Protein ELYS 10.50 4 14 14 19 0.00 42.50 9.62 13 13 14.58 2.07 3 6 2266 252.3 6.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AILLPDLSEPNNEPLFSPASEVPR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 328 5.55 0.00 0 13 25 3 869.12421 2605.35807 2.73 43.95 4575 4575 MS2 40/92 Linfeng_122411_rIgG_2.raw High SSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 193 4.74 0.00 2 1 25 4 907.94202 3628.74624 3.10 31.66 3018 3018 MS2 41/198 Linfeng_122411_rIgG_2.raw High WITEEQPNSATNLR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 317 3.45 0.00 0 18 25 2 829.91174 1658.81621 1.73 27.22 2432 2432 MS2 20/26 Linfeng_122411_rIgG_2.raw High TDTPIESFPTVFAISWGQVK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 371 3.39 0.00 0 26 25 3 741.71936 2223.14353 4.60 48.59 5165 5165 MS2 31/76 Linfeng_122411_rIgG_2.raw High VAIAENLLDVIK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 154 3.37 0.00 0 13 25 2 649.39178 1297.77629 2.81 41.67 4286 4286 MS2 18/22 Linfeng_122411_rIgG_2.raw High EISEASENIYSDVR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 186 3.25 0.00 0 10 25 2 806.37982 1611.75237 1.64 27.90 2523 2523 MS2 21/26 Linfeng_122411_rIgG_2.raw High IEEPSPIVYSLPAPELPEAFFGTPISK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 223 3.14 0.00 0 5 25 3 976.85077 2928.53775 3.25 49.08 5228 5228 MS2 28/104 Linfeng_122411_rIgG_2.raw High NTEKESAWSPPPIEIR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 397 3.13 0.00 1 17 25 3 618.65247 1853.94284 1.92 31.17 2955 2955 MS2 27/60 Linfeng_122411_rIgG_2.raw High SGPSLNELIPDGYNR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 290 3.00 0.00 0 53 25 2 816.40570 1631.80412 1.03 36.70 3657 3657 MS2 16/28 Linfeng_122411_rIgG_2.raw High LPFTDTEQEcLVK Unambiguous 4 1 IPI00954159.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 288 2.87 0.00 0 4 25 2 790.38879 1579.77031 1.90 32.28 3099 3099 MS2 20/24 Linfeng_122411_rIgG_2.raw High EISEASENIYSDVR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 195 2.75 0.00 0 11 100 2 806.38379 1611.76030 6.56 30.78 3287 3287 MS2 18/26 Linfeng_20120125_PCAF_1.raw High LPFTDTEQEcLVK Unambiguous 4 1 IPI00954159.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 321 2.74 0.00 0 12 100 2 790.39294 1579.77861 7.16 38.43 5137 5137 MS2 19/24 Linfeng_20120125_PCAF_1.raw High LPISDSPPDTQEIHVIEQEK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 333 2.51 0.00 0 37 100 3 759.05811 2275.15976 6.34 38.40 5130 5130 MS2 21/76 Linfeng_20120125_PCAF_1.raw High SPLYLVSR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 229 2.32 0.00 0 4 25 2 467.77203 934.53679 1.20 28.06 2544 2544 MS2 13/14 Linfeng_122411_rIgG_2.raw High LPFTDTEQEcLVK Unambiguous 4 1 IPI00954159.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 296 2.23 0.00 0 14 100 2 790.39209 1579.77690 6.08 38.30 5107 5107 MS2 14/24 Linfeng_20120125_PCAF_1.raw High LNIEELLK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 472 2.20 0.00 0 2 25 2 486.29324 971.57921 2.05 38.88 3933 3933 MS2 13/14 Linfeng_122411_rIgG_2.raw High LPFTDTEQEcLVK Unambiguous 4 1 IPI00954159.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 303 2.18 0.00 0 10 100 2 790.39191 1579.77654 5.84 38.38 5124 5124 MS2 16/24 Linfeng_20120125_PCAF_1.raw High EISEASENIYSDVR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 187 2.17 0.00 0 16 100 2 806.38361 1611.75994 6.33 30.81 3293 3293 MS2 17/26 Linfeng_20120125_PCAF_1.raw High LISPLASPADGVK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 209 2.09 0.00 0 44 25 2 634.36804 1267.72881 2.45 29.38 2719 2719 MS2 19/24 Linfeng_122411_rIgG_2.raw IPI00956313.1 58 kDa protein 37.82 8 1 26 320 336.08 33.58 20 132 213.39 25.83 15 76 283.45 28.97 15 112 542 58.3 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 260 3.80 0.00 1 30 100 3 787.05029 2359.13633 6.85 42.78 5068 5068 MS2 33/76 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 3.67 0.00 0 3 61 2 724.39612 1447.78496 6.75 28.00 2292 2292 MS2 24/32 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 3.54 0.00 0 9 100 2 724.39636 1447.78545 7.09 28.19 2172 2172 MS2 22/32 Linfeng_20120125_PCAF_3.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 324 3.50 0.00 1 18 100 2 847.92865 1694.85002 4.80 33.01 3052 3052 MS2 17/28 Linfeng_20120125_PCAF_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High AEAESWYQTKYEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 257 3.43 0.00 1 31 100 3 787.05023 2359.13614 6.77 42.73 5058 5058 MS2 31/76 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.39 0.00 0 16 25 2 724.38947 1447.77165 -2.44 27.27 3101 3101 MS2 22/32 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 3.34 0.00 1 11 100 2 847.92889 1694.85051 5.09 33.07 3067 3067 MS2 18/28 Linfeng_20120125_PCAF_3.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 3.32 0.00 0 7 25 2 799.88513 1598.76299 2.37 26.89 2388 2388 MS2 19/32 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 3.31 0.00 1 19 100 2 847.93024 1694.85320 6.68 32.67 3111 3111 MS2 20/28 Linfeng_20120125_PCAF_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 3.27 0.00 1 6 100 2 847.92853 1694.84978 4.66 32.80 3003 3003 MS2 20/28 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 380 3.27 0.00 0 12 100 2 724.39478 1447.78227 4.90 27.26 2549 2549 MS2 21/32 Linfeng_20120125_PCAF_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 311 3.25 0.00 1 16 100 2 847.92816 1694.84905 4.23 32.84 3012 3012 MS2 19/28 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 340 3.15 0.00 0 9 100 2 724.39600 1447.78472 6.59 27.98 2238 2238 MS2 22/32 Linfeng_20120125_PCAF_9.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 3.14 0.00 1 11 100 2 847.92828 1694.84929 4.37 32.76 2992 2992 MS2 20/28 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 3.11 0.00 0 33 100 2 724.39624 1447.78520 6.92 27.40 2483 2483 MS2 20/32 Linfeng_20120125_PCAF_1.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 3.09 0.00 0 26 40 2 632.35596 1263.70464 8.12 48.45 7071 7071 MS2 18/20 Linfeng_20120125_PCAF_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 3.08 0.00 0 18 100 2 724.39648 1447.78569 7.26 26.93 2099 2099 MS2 18/32 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.08 0.00 0 9 25 2 799.88464 1598.76201 1.75 28.06 2717 2717 MS2 18/32 Linfeng_122411_rIgG_6.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 380 3.08 0.00 0 12 100 2 724.39514 1447.78301 5.41 29.02 2472 2472 MS2 16/32 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 3.06 0.00 1 7 100 2 675.87073 1350.73418 5.74 25.30 1879 1879 MS2 18/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 397 3.00 0.00 0 12 25 2 724.38983 1447.77239 -1.93 27.27 3064 3064 MS2 18/32 Linfeng_091311_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.99 0.00 0 6 100 2 724.39612 1447.78496 6.75 27.83 2682 2682 MS2 20/32 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 255 2.98 0.00 0 9 25 2 799.88348 1598.75969 0.30 26.18 2509 2509 MS2 19/32 Linfeng_122411_rIgG_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 453 2.90 0.00 1 11 25 3 453.24719 1357.72702 -3.84 30.04 3478 3478 MS2 24/44 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.88 0.00 0 22 25 2 704.36133 1407.71538 2.76 39.90 4062 4062 MS2 18/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.87 0.00 0 12 25 2 799.88080 1598.75432 -3.06 29.00 3336 3336 MS2 20/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 448 2.84 0.00 1 18 25 3 453.24771 1357.72858 -2.70 30.25 3431 3431 MS2 24/44 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.84 0.00 0 11 25 2 704.36102 1407.71477 2.32 40.03 4238 4238 MS2 18/22 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 24 38 2 632.35547 1263.70366 7.34 45.35 6350 6350 MS2 18/20 Linfeng_20120125_PCAF_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 351 2.81 0.00 0 42 100 2 724.39630 1447.78533 7.01 27.34 2469 2469 MS2 18/32 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.81 0.00 0 35 69 2 632.35492 1263.70256 6.47 45.65 5919 5919 MS2 18/20 Linfeng_20120125_PCAF_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High DVDAAYMNKVELQAK Unambiguous 11 3 IPI00793641.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.80 0.00 1 10 100 2 847.92792 1694.84856 3.94 32.88 3022 3022 MS2 19/28 Linfeng_20120125_PCAF_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.79 0.00 0 38 100 2 724.39612 1447.78496 6.75 27.31 2348 2348 MS2 18/32 Linfeng_20120125_PCAF_6.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 358 2.79 0.00 1 1 100 2 675.87115 1350.73503 6.38 24.63 1795 1795 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.78 0.00 0 26 34 2 632.35492 1263.70256 6.47 45.21 6317 6317 MS2 18/20 Linfeng_20120125_PCAF_6.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 359 2.78 0.00 0 32 25 2 704.35797 1407.70867 -2.01 40.84 4893 4893 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 2.76 0.00 1 13 100 2 675.87152 1350.73577 6.92 23.81 1565 1565 MS2 15/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.76 0.00 0 31 48 2 632.35510 1263.70293 6.76 45.29 6143 6143 MS2 18/20 Linfeng_20120125_PCAF_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 2.75 0.00 0 12 25 2 799.88153 1598.75578 -2.14 29.19 3288 3288 MS2 20/32 Linfeng_091311_rIgG_9.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.75 0.00 1 8 100 2 675.87079 1350.73430 5.83 23.62 1688 1688 MS2 15/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.74 0.00 0 2 100 2 799.88922 1598.77117 7.48 30.00 2464 2464 MS2 19/32 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.73 0.00 0 24 28 2 632.35510 1263.70293 6.76 44.97 6694 6694 MS2 18/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.70 0.00 0 34 25 2 704.36005 1407.71282 0.93 39.89 4042 4042 MS2 18/22 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.70 0.00 0 28 86 2 632.35486 1263.70244 6.38 45.53 5718 5718 MS2 18/20 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.69 0.00 0 36 25 3 533.59131 1598.75937 0.10 26.31 2527 2527 MS2 25/64 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 13 25 2 704.36017 1407.71306 1.11 39.88 3652 3652 MS2 18/22 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.67 0.00 0 38 25 2 704.36121 1407.71514 2.58 39.80 4162 4162 MS2 18/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 309 2.67 0.00 0 19 100 2 554.27832 1107.54936 5.79 19.57 1382 1382 MS2 15/16 Linfeng_20120125_PCAF_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 7 100 2 554.27863 1107.54997 6.34 17.67 1327 1327 MS2 14/16 Linfeng_20120125_PCAF_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.66 0.00 0 22 25 2 704.35767 1407.70806 -2.45 40.92 4840 4840 MS2 17/22 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.66 0.00 0 25 56 2 632.35510 1263.70293 6.76 45.71 6439 6439 MS2 18/20 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 34 72 2 632.35498 1263.70268 6.57 45.74 5940 5940 MS2 18/20 Linfeng_20120125_PCAF_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.65 0.00 0 16 100 2 724.39722 1447.78716 8.27 27.19 1998 1998 MS2 18/32 Linfeng_20120125_PCAF_3.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.64 0.00 1 4 100 2 675.87225 1350.73723 8.00 24.58 1644 1644 MS2 16/22 Linfeng_20120125_PCAF_3.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.63 0.00 0 42 25 2 704.35791 1407.70854 -2.10 41.07 4822 4822 MS2 18/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.63 0.00 0 11 100 2 724.39673 1447.78618 7.60 27.95 2234 2234 MS2 21/32 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.62 0.00 0 31 100 2 632.35583 1263.70439 7.92 46.21 6364 6364 MS2 18/20 Linfeng_20120125_PCAF_4.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 536 2.62 0.00 1 24 25 3 453.24814 1357.72986 -1.75 30.09 3440 3440 MS2 25/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.60 0.00 0 16 58 2 632.35547 1263.70366 7.34 46.01 6944 6944 MS2 18/20 Linfeng_20120125_PCAF_1.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 363 2.59 0.00 1 29 100 2 675.87109 1350.73491 6.29 23.69 1707 1707 MS2 14/22 Linfeng_20120125_PCAF_1.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.57 0.00 0 19 25 2 704.35681 1407.70635 -3.66 41.01 4801 4801 MS2 17/22 Linfeng_091311_rIgG_5.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.57 0.00 2 15 100 3 436.89230 1308.66236 6.16 17.30 1300 1300 MS2 19/36 Linfeng_20120125_PCAF_6.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.57 0.00 0 4 100 2 724.39630 1447.78533 7.01 27.52 2194 2194 MS2 19/32 Linfeng_20120125_PCAF_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.56 0.00 0 21 100 2 724.39655 1447.78581 7.34 26.98 2111 2111 MS2 20/32 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 39 100 2 632.35553 1263.70378 7.44 46.02 6515 6515 MS2 18/20 Linfeng_20120125_PCAF_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 2.55 0.00 1 21 25 3 453.24808 1357.72968 -1.89 30.27 3451 3451 MS2 24/44 Linfeng_091311_rIgG_6.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.54 0.00 0 1 2 2 704.36108 1407.71489 2.41 48.57 6449 6449 MS2 18/22 Linfeng_20120125_PCAF_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 389 2.54 0.00 1 12 25 2 679.36774 1357.72820 -2.98 30.14 3179 3179 MS2 18/22 Linfeng_091311_rIgG_1.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.53 0.00 0 26 20 2 704.35791 1407.70854 -2.10 40.85 4632 4632 MS2 18/22 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.52 0.00 2 15 100 3 436.89246 1308.66281 6.51 14.25 898 898 MS2 15/36 Linfeng_20120125_PCAF_1.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 409 2.52 0.00 1 24 100 2 675.87201 1350.73674 7.64 24.06 1767 1767 MS2 15/22 Linfeng_20120125_PCAF_1.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 368 2.51 0.00 0 19 100 2 583.29999 1165.59270 6.76 25.58 1922 1922 MS2 17/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 539 2.51 0.00 1 24 25 3 453.24838 1357.73059 -1.21 28.40 2815 2815 MS2 24/44 Linfeng_122411_rIgG_5.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 2.51 0.00 1 35 100 2 675.87195 1350.73662 7.55 24.13 1779 1779 MS2 15/22 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 487 2.51 0.00 0 12 100 2 665.37189 1329.73650 7.83 11.68 871 871 MS2 15/22 Linfeng_20120125_PCAF_7.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 332 2.50 0.00 0 14 100 2 724.39630 1447.78533 7.01 29.18 2334 2334 MS2 20/32 Linfeng_20120125_PCAF_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 455 2.49 0.00 0 11 100 2 665.37140 1329.73552 7.09 11.47 845 845 MS2 17/22 Linfeng_20120125_PCAF_7.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.45 0.00 0 17 79 2 632.35388 1263.70049 4.83 55.14 7716 7716 MS2 18/20 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 507 2.45 0.00 1 35 100 3 453.25204 1357.74158 6.88 38.39 4217 4217 MS2 22/44 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.44 0.00 1 42 100 3 453.25171 1357.74057 6.14 38.34 4207 4207 MS2 22/44 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 576 2.43 0.00 0 9 30 2 602.32538 1203.64348 5.50 36.11 3772 3772 MS2 16/18 Linfeng_20120125_PCAF_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 286 2.42 0.00 0 0 100 2 799.88910 1598.77092 7.33 29.90 2797 2797 MS2 16/32 Linfeng_20120125_PCAF_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 24 100 2 632.35547 1263.70366 7.34 45.99 5822 5822 MS2 18/20 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.41 0.00 0 10 100 2 602.32587 1203.64446 6.31 35.41 3646 3646 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 486 2.40 0.00 0 35 100 2 665.37158 1329.73589 7.37 1.48 133 133 MS2 16/22 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 463 2.39 0.00 0 7 100 2 665.37170 1329.73613 7.55 10.87 739 739 MS2 17/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.39 0.00 0 9 74 2 602.32617 1203.64507 6.82 35.49 3663 3663 MS2 16/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.38 0.00 0 7 63 2 602.32635 1203.64543 7.12 35.74 3710 3710 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 284 2.37 0.00 0 20 100 2 554.27820 1107.54912 5.57 19.46 1265 1265 MS2 14/16 Linfeng_20120125_PCAF_1.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 355 2.35 0.00 1 11 100 2 675.87225 1350.73723 8.00 24.61 1648 1648 MS2 16/22 Linfeng_20120125_PCAF_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 2.35 0.00 1 27 25 3 453.24997 1357.73536 2.29 28.89 2655 2655 MS2 21/44 Linfeng_122411_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 431 2.33 0.00 0 6 100 2 665.37134 1329.73540 7.00 11.47 763 763 MS2 15/22 Linfeng_20120125_PCAF_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 294 2.33 0.00 0 9 100 2 554.27869 1107.55010 6.45 19.48 1457 1457 MS2 14/16 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 490 2.32 0.00 0 16 100 2 602.32642 1203.64556 7.22 36.25 3926 3926 MS2 16/18 Linfeng_20120125_PCAF_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.32 0.00 0 27 50 2 632.35492 1263.70256 6.47 45.24 5650 5650 MS2 18/20 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.32 0.00 0 10 54 2 602.32581 1203.64433 6.21 36.17 3786 3786 MS2 15/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium YEDEINKR Unambiguous 22 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00220327.4;IPI00942512.1;IPI00956313.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 245 2.31 0.00 1 17 25 3 356.17654 1066.51508 -1.24 15.88 1478 1478 MS2 18/28 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 366 2.31 0.00 2 5 8 3 436.88864 1308.65137 -2.24 18.37 1829 1829 MS2 21/36 Linfeng_091311_rIgG_3.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 363 2.31 0.00 2 4 3 3 436.88809 1308.64972 -3.50 18.40 1859 1859 MS2 21/36 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 282 2.31 0.00 0 15 100 2 554.27850 1107.54973 6.12 17.65 1297 1297 MS2 14/16 Linfeng_20120125_PCAF_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 591 2.30 0.00 0 15 100 2 602.32593 1203.64458 6.41 35.32 3627 3627 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 289 2.28 0.00 0 20 100 2 554.27832 1107.54936 5.79 17.63 1128 1128 MS2 14/16 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 361 2.28 0.00 0 28 22 2 632.35364 1263.70000 4.45 48.48 7555 7555 MS2 18/20 Linfeng_20120125_PCAF_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 512 2.28 0.00 0 23 100 2 602.32629 1203.64531 7.02 35.77 4074 4074 MS2 15/18 Linfeng_20120125_PCAF_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 361 2.27 0.00 2 6 17 3 436.88849 1308.65091 -2.59 18.41 1822 1822 MS2 21/36 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.26 0.00 0 23 100 2 799.88751 1598.76775 5.34 29.80 3049 3049 MS2 21/32 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 590 2.26 0.00 0 9 100 2 602.32574 1203.64421 6.11 35.36 4397 4397 MS2 17/18 Linfeng_20120125_PCAF_1.raw Medium AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.26 0.00 0 26 25 3 369.85086 1107.53803 -4.44 21.90 2350 2350 MS2 14/32 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 291 2.26 0.00 0 15 100 2 554.27875 1107.55022 6.56 17.56 1249 1249 MS2 14/16 Linfeng_20120125_PCAF_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 471 2.25 0.00 0 27 25 3 443.91223 1329.72214 -2.97 44.95 5309 5309 MS2 22/44 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 509 2.25 0.00 0 27 98 2 602.32623 1203.64519 6.92 35.70 4056 4056 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.25 0.00 2 5 16 3 436.88831 1308.65036 -3.01 18.60 1866 1866 MS2 21/36 Linfeng_091311_rIgG_6.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 375 2.22 0.00 0 16 100 2 611.82239 1222.63750 4.95 31.50 3460 3460 MS2 15/20 Linfeng_20120125_PCAF_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 2.22 0.00 0 6 100 2 665.37012 1329.73296 5.16 11.16 795 795 MS2 16/22 Linfeng_20120125_PCAF_5.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.22 0.00 0 8 44 2 602.32581 1203.64433 6.21 35.99 3756 3756 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.22 0.00 0 6 37 2 632.35406 1263.70085 5.12 55.14 8152 8152 MS2 18/20 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 506 2.21 0.00 0 7 88 2 602.32623 1203.64519 6.92 35.44 3653 3653 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.21 0.00 0 59 100 2 665.37085 1329.73442 6.27 1.50 137 137 MS2 14/22 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 286 2.21 0.00 0 8 100 2 554.27844 1107.54961 6.01 17.71 1169 1169 MS2 13/16 Linfeng_20120125_PCAF_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 305 2.20 0.00 0 36 100 2 632.35571 1263.70415 7.73 45.46 6087 6087 MS2 18/20 Linfeng_20120125_PCAF_9.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 2.20 0.00 0 10 25 2 799.88184 1598.75640 -1.76 29.21 3257 3257 MS2 19/32 Linfeng_091311_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.19 0.00 0 44 19 2 632.35229 1263.69731 2.32 44.35 6847 6847 MS2 17/20 Linfeng_20120125_PCAF_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.18 0.00 0 14 100 2 602.32562 1203.64397 5.90 35.45 4419 4419 MS2 15/18 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 586 2.18 0.00 0 13 100 2 602.32605 1203.64482 6.61 35.36 3636 3636 MS2 16/18 Linfeng_20120125_PCAF_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 478 2.17 0.00 0 21 100 2 665.37146 1329.73564 7.18 1.18 90 90 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 583 2.17 0.00 0 11 73 2 602.32593 1203.64458 6.41 36.29 3807 3807 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 496 2.17 0.00 0 25 100 2 602.32654 1203.64580 7.43 35.70 3638 3638 MS2 13/18 Linfeng_20120125_PCAF_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 515 2.14 0.00 0 19 100 2 602.32623 1203.64519 6.92 35.15 3593 3593 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 509 2.14 0.00 0 33 100 2 558.30426 1115.60124 6.19 33.58 3964 3964 MS2 15/18 Linfeng_20120125_PCAF_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.14 0.00 0 13 96 2 602.32574 1203.64421 6.11 36.36 3821 3821 MS2 15/18 Linfeng_20120125_PCAF_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 593 2.14 0.00 0 13 100 2 602.32593 1203.64458 6.41 35.18 4354 4354 MS2 17/18 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 589 2.12 0.00 0 10 64 2 602.32581 1203.64433 6.21 36.23 3797 3797 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 2.11 0.00 0 5 100 2 799.88782 1598.76836 5.72 29.89 3158 3158 MS2 17/32 Linfeng_20120125_PCAF_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 588 2.11 0.00 0 16 100 2 602.32599 1203.64470 6.51 35.22 3607 3607 MS2 14/18 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 427 2.09 0.00 0 55 100 2 665.37115 1329.73503 6.72 1.43 122 122 MS2 15/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 15 5 IPI00009867.3;IPI00220327.4;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 392 2.09 0.00 0 21 100 2 611.82214 1222.63701 4.55 31.38 3430 3430 MS2 13/20 Linfeng_20120125_PCAF_1.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 402 2.08 0.00 1 61 100 2 679.37378 1357.74028 5.92 38.61 4255 4255 MS2 16/22 Linfeng_20120125_PCAF_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00005859.5;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 424 2.07 0.00 0 43 100 2 665.37091 1329.73454 6.36 44.86 6668 6668 MS2 13/22 Linfeng_20120125_PCAF_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 574 2.06 0.00 0 22 100 2 602.32587 1203.64446 6.31 36.09 3890 3890 MS2 14/18 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 577 2.05 0.00 0 30 100 2 602.32581 1203.64433 6.21 35.02 3567 3567 MS2 15/18 Linfeng_20120125_PCAF_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 510 2.03 0.00 0 33 100 2 558.30377 1115.60027 5.31 33.42 3927 3927 MS2 16/18 Linfeng_20120125_PCAF_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 581 2.02 0.00 0 32 100 2 602.32587 1203.64446 6.31 35.92 3855 3855 MS2 15/18 Linfeng_20120125_PCAF_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 495 2.02 0.00 0 29 100 2 602.32623 1203.64519 6.92 35.99 3868 3868 MS2 16/18 Linfeng_20120125_PCAF_9.raw High NKYEDEINK Unambiguous 17 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 505 2.02 0.00 0 23 100 2 602.32617 1203.64507 6.82 36.39 3791 3791 MS2 14/18 Linfeng_20120125_PCAF_3.raw High SGFSSISVSR Unambiguous 5 1 IPI00956313.1 CID 1.0000 0.0000 1 1 260 2.01 0.00 0 40 25 2 513.76239 1026.51750 -3.88 27.03 2757 2757 MS2 15/18 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 580 2.00 0.00 0 28 100 2 602.32593 1203.64458 6.41 35.60 4032 4032 MS2 14/18 Linfeng_20120125_PCAF_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00964686.1 Putative uncharacterized protein HNRNPAB 23.93 8 6 7 37 37.00 21.43 5 13 27.05 21.43 6 10 32.78 13.93 3 14 280 30.3 7.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 3 25 2 752.38965 1503.77202 1.99 30.87 3086 3086 MS2 22/26 Linfeng_122411_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 131 3.44 0.00 0 5 5 2 750.34668 1499.68608 -0.87 3.57 360 360 MS2 19/24 Linfeng_122411_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 441 3.35 0.00 0 33 25 2 752.38629 1503.76531 -2.48 32.16 3697 3697 MS2 22/26 Linfeng_091311_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 140 3.28 0.00 0 19 25 2 750.34576 1499.68425 -2.09 20.11 2030 2030 MS2 19/24 Linfeng_091311_rIgG_9.raw High GFVFITFKEEEPVKK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 316 3.23 0.00 2 12 25 3 599.99615 1797.97391 -2.63 34.44 3992 3992 MS2 21/56 Linfeng_091311_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 465 3.22 0.00 0 11 25 2 752.39014 1503.77300 2.64 30.14 2571 2571 MS2 20/26 Linfeng_122411_rIgG_9.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 125 3.19 0.00 0 0 25 2 750.34674 1499.68620 -0.78 20.07 2070 2070 MS2 19/24 Linfeng_091311_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 127 3.18 0.00 0 0 25 2 750.34601 1499.68474 -1.76 20.23 2064 2064 MS2 17/24 Linfeng_091311_rIgG_7.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 127 3.01 0.00 0 0 25 2 750.34637 1499.68547 -1.27 20.11 2148 2148 MS2 18/24 Linfeng_091311_rIgG_10.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 453 2.98 0.00 0 10 100 2 752.39313 1503.77898 6.61 36.15 4164 4164 MS2 21/26 Linfeng_20120125_PCAF_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 445 2.96 0.00 0 28 25 2 752.38629 1503.76531 -2.48 32.42 3722 3722 MS2 21/26 Linfeng_091311_rIgG_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 250 2.77 0.00 0 8 25 2 584.28802 1167.56877 -2.33 28.92 3252 3252 MS2 16/18 Linfeng_091311_rIgG_7.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 140 2.69 0.00 0 19 25 3 500.56671 1499.68558 -1.20 20.18 2086 2086 MS2 22/48 Linfeng_091311_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 490 2.67 0.00 0 4 25 3 501.92908 1503.77268 2.43 30.97 3100 3100 MS2 22/52 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 277 2.53 0.00 0 15 25 2 584.28796 1167.56865 -2.44 29.62 3362 3362 MS2 16/18 Linfeng_091311_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 130 2.52 0.00 0 23 25 2 750.34552 1499.68376 -2.41 20.15 2115 2115 MS2 17/24 Linfeng_091311_rIgG_8.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 280 2.49 0.00 0 2 88 2 584.29364 1167.58000 7.29 28.81 2608 2608 MS2 16/18 Linfeng_20120125_PCAF_6.raw Medium GFVFITFKEEEPVKK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 306 2.43 0.00 2 20 100 3 600.00183 1797.99094 6.84 48.19 7038 7038 MS2 23/56 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 324 2.42 0.00 0 1 90 2 584.29327 1167.57927 6.66 28.85 2617 2617 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 298 2.42 0.00 0 1 100 2 584.29340 1167.57952 6.87 28.04 2481 2481 MS2 16/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 279 2.40 0.00 0 2 100 2 584.29358 1167.57988 7.18 28.50 2560 2560 MS2 16/18 Linfeng_20120125_PCAF_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 423 2.39 0.00 0 24 100 2 752.39374 1503.78020 7.43 37.17 4396 4396 MS2 19/26 Linfeng_20120125_PCAF_6.raw Medium GFGFILFKDAASVEK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 498 2.38 0.00 1 21 25 3 543.62909 1628.87271 2.67 40.24 4265 4265 MS2 26/56 Linfeng_122411_rIgG_6.raw High GFVFITFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 516 2.29 0.00 0 4 25 2 479.77448 958.54167 2.05 40.16 4254 4254 MS2 12/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 275 2.28 0.00 0 19 25 2 584.28815 1167.56902 -2.12 29.66 3316 3316 MS2 16/18 Linfeng_091311_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 307 2.25 0.00 0 22 100 2 584.29340 1167.57952 6.87 30.48 3303 3303 MS2 15/18 Linfeng_20120125_PCAF_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 318 2.24 0.00 0 6 100 2 584.29333 1167.57939 6.76 28.01 2475 2475 MS2 15/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 276 2.24 0.00 0 2 100 2 584.29254 1167.57781 5.41 28.17 2503 2503 MS2 15/18 Linfeng_20120125_PCAF_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 457 2.23 0.00 0 22 100 2 752.39246 1503.77764 5.72 36.41 3782 3782 MS2 14/26 Linfeng_20120125_PCAF_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 308 2.16 0.00 0 25 100 2 584.29364 1167.58000 7.29 30.87 2982 2982 MS2 15/18 Linfeng_20120125_PCAF_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw High GFGFILFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 344 2.16 0.00 0 30 25 2 464.76895 928.53063 1.59 42.63 4563 4563 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 290 2.09 0.00 0 4 100 2 584.29272 1167.57817 5.72 29.35 2398 2398 MS2 14/18 Linfeng_20120125_PCAF_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 293 2.02 0.00 0 9 100 2 584.29358 1167.57988 7.18 29.86 2789 2789 MS2 15/18 Linfeng_20120125_PCAF_6.raw High GFGFILFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 430 2.01 0.00 0 36 25 2 464.76712 928.52696 -2.36 44.10 5209 5209 MS2 13/14 Linfeng_091311_rIgG_6.raw IPI00965290.1 Isoform 3 of Cullin-4B 5.02 4 1 3 3 7.62 5.02 3 3 717 84.0 6.79 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LKHEcGAAFTSK Unambiguous 6 2 IPI00965290.1;IPI00419273.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 2.89 0.00 1 22 25 3 450.22699 1348.66642 -1.07 15.16 1374 1374 MS2 24/44 Linfeng_091311_rIgG_3.raw High TIDGILLLIER Unambiguous 6 2 IPI00965290.1;IPI00419273.5 CID 1.0000 0.0000 1 1 197 2.39 0.00 0 17 25 2 628.38464 1255.76201 -0.06 47.66 5685 5685 MS2 16/20 Linfeng_091311_rIgG_3.raw Medium IQDLSLLYQLFSR Unambiguous 4 1 IPI00965290.1 CID 1.0000 0.0000 1 1 286 2.33 0.00 0 34 25 3 532.63177 1595.88077 0.97 50.85 6081 6081 MS2 20/48 Linfeng_091311_rIgG_3.raw IPI00967562.1 Putative uncharacterized protein HNRNPD 30.36 10 1 4 7 0.00 17.20 30.36 4 7 0.00 112 12.6 8.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFVGGLSPDTPEEK Unambiguous 9 1 IPI00967562.1 CID 1.0000 0.0000 1 1 408 2.90 0.00 0 6 8 2 744.88190 1488.75652 -1.08 30.17 3056 3056 MS2 20/26 Linfeng_122411_rIgG_5.raw High FGEVVDcTLK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High FGEVVDcTLK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High SRGFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 475 2.50 0.00 1 10 25 3 386.55405 1157.64759 0.81 36.54 3804 3804 MS2 21/36 Linfeng_122411_rIgG_6.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 500 2.18 0.00 0 1 5 2 457.76004 914.51280 -0.76 41.28 4584 4584 MS2 13/14 Linfeng_122411_rIgG_5.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 3 25 2 457.76132 914.51537 2.04 41.26 4391 4391 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTLK Unambiguous 21 3 IPI00045498.4;IPI00964686.1;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw IPI00000643.1 BAG family molecular chaperone regulator 2 15.64 1 3 3 3 8.81 15.64 3 3 211 23.8 6.70 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIDEVVNKFLDDLGNAK Unambiguous 1 1 IPI00000643.1 CID 1.0000 0.0000 1 1 367 4.00 0.00 1 13 25 3 635.01270 1903.02353 3.32 45.08 4626 4626 MS2 32/64 Linfeng_122411_rIgG_8.raw High FLDDLGNAK Unambiguous 1 1 IPI00000643.1 CID 1.0000 0.0000 1 1 424 2.49 0.00 0 17 25 2 496.75677 992.50627 1.49 26.73 2288 2288 MS2 14/16 Linfeng_122411_rIgG_8.raw Medium LLESLDQLELRVEALR Unambiguous 1 1 IPI00000643.1 CID 1.0000 0.0000 1 1 168 2.32 0.00 1 14 25 3 633.03156 1897.08011 2.48 43.57 4438 4438 MS2 19/60 Linfeng_122411_rIgG_8.raw IPI00004968.1 Pre-mRNA-processing factor 19 8.53 1 3 3 3 7.51 8.53 3 3 504 55.1 6.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALQDEWDAVMLHSFTLR Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 344 2.63 0.00 0 31 25 3 678.00330 2031.99533 -0.21 45.57 5152 5152 MS2 28/64 Linfeng_122411_rIgG_5.raw Medium ILTGGADKNVVVFDK Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 331 2.48 0.00 1 41 25 3 525.96307 1575.87467 0.32 26.33 2529 2529 MS2 23/56 Linfeng_122411_rIgG_5.raw High TLQLDNNFEVK Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 386 2.40 0.00 0 50 25 2 660.84210 1320.67693 -1.92 31.13 3191 3191 MS2 15/20 Linfeng_122411_rIgG_5.raw IPI00007188.5 ADP/ATP translocase 2 15.10 1 2 4 6 17.02 15.10 4 6 298 32.9 9.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFLAGGVAAAISK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 353 3.66 0.00 0 11 25 2 610.33862 1219.66997 1.46 36.33 3211 3211 MS2 21/24 Linfeng_122411_rIgG_7.raw High DFLAGGVAAAISK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 372 3.25 0.00 0 5 25 3 407.22803 1219.66953 1.10 36.39 3219 3219 MS2 30/48 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 494 3.00 0.00 0 12 25 3 482.91943 1446.74375 1.44 41.36 3840 3840 MS2 28/44 Linfeng_122411_rIgG_7.raw High AAYFGIYDTAK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 322 2.62 0.00 0 21 14 2 610.30267 1219.59807 -1.09 4.00 405 405 MS2 17/20 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 379 2.48 0.00 0 4 25 2 723.87616 1446.74504 2.34 41.30 3832 3832 MS2 20/22 Linfeng_122411_rIgG_7.raw High EQGVLSFWR Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 341 2.01 0.00 0 5 25 2 561.29144 1121.57561 1.55 37.97 3417 3417 MS2 13/16 Linfeng_122411_rIgG_7.raw IPI00007208.4 Probable ATP-dependent RNA helicase DDX41 5.63 2 3 3 3 7.81 5.63 3 3 622 69.8 6.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SALVKPVTINVGR Unambiguous 2 1 IPI00007208.4 CID 1.0000 0.0000 1 1 89 3.13 0.00 0 31 25 3 451.94620 1353.82404 2.00 25.39 2304 2304 MS2 22/48 Linfeng_122411_rIgG_4.raw High LLQEDSSPLLR Unambiguous 2 1 IPI00007208.4 CID 1.0000 0.0000 1 1 388 2.43 0.00 0 30 25 2 635.85443 1270.70159 1.09 29.86 2898 2898 MS2 18/20 Linfeng_122411_rIgG_4.raw Medium QTHGILEYYcR Unambiguous 2 1 IPI00007208.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 228 2.25 0.00 0 44 25 3 480.56363 1439.67633 1.87 27.15 2538 2538 MS2 19/40 Linfeng_122411_rIgG_4.raw IPI00011875.2 Protein Red 7.36 3 3 3 3 8.29 7.36 3 3 557 65.6 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYERNELFLPGR Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 451 3.17 0.00 1 27 25 3 488.92538 1464.76160 1.47 28.39 2702 2702 MS2 25/44 Linfeng_122411_rIgG_4.raw High DGVNKDYEETELISTTANYR Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 189 2.93 0.00 1 8 25 3 773.36584 2318.08298 2.00 32.24 3208 3208 MS2 25/76 Linfeng_122411_rIgG_4.raw High GLDFALLQK Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 323 2.19 0.00 0 9 25 2 502.79367 1004.58006 2.49 36.83 3790 3790 MS2 12/16 Linfeng_122411_rIgG_4.raw IPI00018213.5 Leucine-rich repeat-containing protein 8D 4.55 1 3 3 3 9.29 4.55 3 3 858 98.1 7.72 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FTDVAEIPAWVYLLK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 241 3.39 0.00 0 33 25 2 882.98639 1764.96550 4.73 49.29 5253 5253 MS2 18/28 Linfeng_122411_rIgG_3.raw High VEHFVSILGK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 478 3.11 0.00 0 14 25 3 376.88629 1128.64432 2.75 29.26 2673 2673 MS2 20/36 Linfeng_122411_rIgG_3.raw High VPSNITDVAPHLTK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 387 2.79 0.00 0 26 25 3 497.94461 1491.81928 1.77 27.15 2396 2396 MS2 26/52 Linfeng_122411_rIgG_3.raw IPI00019912.3 Peroxisomal multifunctional enzyme type 2 5.03 1 3 3 3 7.80 5.03 3 3 736 79.6 8.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYALAFAER Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 354 2.76 0.00 0 30 25 2 506.26740 1011.52751 1.64 30.36 2963 2963 MS2 15/16 Linfeng_122411_rIgG_4.raw High VVLVTGAGAGLGR Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 179 2.57 0.00 0 43 25 2 585.35437 1169.70146 1.11 28.02 2653 2653 MS2 20/24 Linfeng_122411_rIgG_4.raw High LGLLGLANSLAIEGR Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 128 2.47 0.00 0 28 25 2 748.94556 1496.88384 2.84 43.58 4638 4638 MS2 19/28 Linfeng_122411_rIgG_4.raw IPI00025491.1 Eukaryotic initiation factor 4A-I 11.58 1 3 4 4 9.96 11.58 4 4 406 46.1 5.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GIYAYGFEKPSAIQQR Unambiguous 2 2 IPI00025491.1;IPI00009328.4 CID 1.0000 0.0000 1 1 388 2.68 0.00 0 18 6 3 609.98376 1827.93674 -1.17 28.77 2865 2865 MS2 26/60 Linfeng_122411_rIgG_5.raw High ATQALVLAPTR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 212 2.47 0.00 0 53 25 2 570.84167 1140.67607 2.18 19.98 1717 1717 MS2 16/20 Linfeng_122411_rIgG_5.raw Medium KEELTLEGIR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 469 2.47 0.00 1 48 25 3 396.56006 1187.66562 2.13 21.67 1919 1919 MS2 19/36 Linfeng_122411_rIgG_5.raw High VLITTDLLAR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 184 2.34 0.00 0 19 25 2 557.84576 1114.68425 1.04 35.66 3280 3280 MS2 15/18 Linfeng_122411_rIgG_9.raw IPI00031522.2 "Trifunctional enzyme subunit alpha, mitochondrial" 5.77 1 3 3 4 11.98 5.77 3 4 763 82.9 9.04 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLQEVTQLSQEAQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 502 3.76 0.00 0 31 25 3 544.28510 1630.84073 0.72 29.06 2792 2792 MS2 32/52 Linfeng_122411_rIgG_4.raw High TLQEVTQLSQEAQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 504 3.61 0.00 0 16 25 2 815.92535 1630.84343 2.38 29.09 2796 2796 MS2 21/26 Linfeng_122411_rIgG_4.raw High TVLGTPEVLLGALPGAGGTQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 186 2.55 0.00 0 20 25 3 669.71490 2007.13016 3.35 41.91 4427 4427 MS2 32/80 Linfeng_122411_rIgG_4.raw High FVDLYGAQK Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 333 2.06 0.00 0 25 25 2 520.77545 1040.54363 2.37 26.99 2516 2516 MS2 13/16 Linfeng_122411_rIgG_4.raw IPI00031627.4 DNA-directed RNA polymerase II subunit RPB1 6.85 1 9 9 9 26.15 6.85 9 9 1970 217.0 7.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TVITPDPNLSIDQVGVPR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 309 3.79 0.00 0 32 25 3 641.01953 1921.04404 2.62 35.59 3517 3517 MS2 29/68 Linfeng_122411_rIgG_2.raw High INISQVIAVVGQQNVEGK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 216 3.52 0.00 0 19 25 3 632.69135 1896.05948 2.37 42.40 4379 4379 MS2 34/68 Linfeng_122411_rIgG_2.raw High TTSNDIVEIFTVLGIEAVR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 300 3.49 0.00 0 46 25 3 693.04755 2077.12809 5.02 55.06 5926 5926 MS2 23/72 Linfeng_122411_rIgG_2.raw High ELYHVISFDGSYVNYR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 267 2.90 0.00 0 8 25 3 654.65161 1961.94028 0.53 35.86 3550 3550 MS2 25/60 Linfeng_122411_rIgG_2.raw High TPSLTVFLLGQSAR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 253 2.90 0.00 0 13 25 3 497.28525 1489.84119 2.56 41.94 4320 4320 MS2 23/52 Linfeng_122411_rIgG_2.raw High NSINQVVQLR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 337 2.80 0.00 0 15 25 2 585.83423 1170.66118 1.87 27.18 2426 2426 MS2 15/18 Linfeng_122411_rIgG_2.raw Medium LSGEAFDWLLGEIESK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 414 2.36 0.00 0 34 25 3 598.63885 1793.90201 3.52 49.92 5332 5332 MS2 28/60 Linfeng_122411_rIgG_2.raw High IIITEDGEFK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 384 2.29 0.00 0 49 25 2 582.81207 1164.61687 1.83 29.60 2748 2748 MS2 16/18 Linfeng_122411_rIgG_2.raw High FGVEQPEGDEDLTK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 179 2.11 0.00 0 32 25 2 782.36383 1563.72038 1.91 25.94 2260 2260 MS2 15/26 Linfeng_122411_rIgG_2.raw IPI00033583.3 Serpin B12 8.15 2 3 3 3 6.55 8.15 3 3 405 46.2 5.53 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQTILFYGR Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 256 2.40 0.00 0 29 25 2 549.80200 1098.59673 2.25 31.56 3006 3006 MS2 13/16 Linfeng_122411_rIgG_2.raw High IGFIEEVK Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 264 2.11 0.00 0 13 25 2 467.76669 934.52611 1.76 30.34 2846 2846 MS2 13/14 Linfeng_122411_rIgG_2.raw High ADLTGISPSPNLYLSK Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 353 2.03 0.00 0 31 25 2 838.45245 1675.89763 4.44 31.61 2616 2616 MS2 12/30 Linfeng_122411_rIgG_7.raw IPI00186290.6 Elongation factor 2 5.01 1 3 3 3 7.68 5.01 3 3 858 95.3 6.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High STAISLFYELSENDLNFIK Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 361 2.98 0.00 0 21 25 3 735.37781 2204.11887 3.02 51.12 5482 5482 MS2 26/72 Linfeng_122411_rIgG_3.raw High EGIPALDNFLDKL Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 446 2.36 0.00 1 23 25 2 722.89081 1444.77434 4.18 49.53 5030 5030 MS2 13/24 Linfeng_122411_rIgG_9.raw High VFSGLVSTGLK Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 254 2.34 0.00 0 16 25 2 554.32495 1107.64263 1.57 30.97 2679 2679 MS2 18/20 Linfeng_122411_rIgG_9.raw IPI00219806.7 Protein S100-A7 44.55 1 6 6 11 34.28 44.55 6 11 101 11.5 6.77 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KIDFSEFLSLLGDIATDYHK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 400 4.76 0.00 1 12 25 3 771.40137 2312.18955 3.71 53.78 6189 6189 MS2 34/76 Linfeng_122411_rIgG_5.raw High KGTNYLADVFEKK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 400 3.57 0.00 2 14 25 3 504.94080 1512.80783 1.39 27.95 2364 2364 MS2 27/48 Linfeng_122411_rIgG_10.raw High KGTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 397 3.47 0.00 1 12 25 3 462.24237 1384.71256 1.30 32.47 2972 2972 MS2 28/44 Linfeng_122411_rIgG_10.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 292 3.31 0.00 0 4 11 2 628.81244 1256.61760 1.44 36.90 3541 3541 MS2 16/20 Linfeng_122411_rIgG_10.raw High KIDFSEFLSLLGDIATDYHK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 389 3.13 0.00 1 21 25 4 578.80310 2312.19057 4.15 53.70 6180 6180 MS2 36/114 Linfeng_122411_rIgG_5.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 297 3.07 0.00 0 30 25 2 628.81171 1256.61614 0.27 36.89 3656 3656 MS2 16/20 Linfeng_122411_rIgG_3.raw High ENFPNFLSAcDK Unambiguous 1 1 IPI00219806.7 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 3.05 0.00 0 8 25 2 721.32452 1441.64177 0.05 36.03 3429 3429 MS2 17/22 Linfeng_122411_rIgG_10.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 300 2.83 0.00 0 21 25 2 628.81274 1256.61821 1.93 36.27 3203 3203 MS2 16/20 Linfeng_122411_rIgG_7.raw High KGTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 384 2.69 0.00 1 10 25 2 692.85980 1384.71233 1.13 32.54 2981 2981 MS2 15/22 Linfeng_122411_rIgG_10.raw Medium IDFSEFLSLLGDIATDYHK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 357 2.31 0.00 0 8 25 3 728.70239 2184.09262 3.03 55.62 6416 6416 MS2 22/72 Linfeng_122411_rIgG_5.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 304 2.09 0.00 0 37 25 2 628.81244 1256.61760 1.44 36.91 3438 3438 MS2 14/20 Linfeng_122411_rIgG_9.raw IPI00291755.6 Isoform 1 of Nuclear pore membrane glycoprotein 210 7.63 2 11 11 13 42.19 7.63 11 13 0.00 1887 205.0 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFGAPEVLENLEVK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 458 4.77 0.00 0 6 25 3 515.28516 1543.84092 2.72 40.65 4158 4158 MS2 37/52 Linfeng_122411_rIgG_2.raw High LQLLNPEIEAEQILMSPNSYIK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 287 4.74 0.00 0 7 25 3 848.45630 2543.35434 4.59 48.99 5217 5217 MS2 35/84 Linfeng_122411_rIgG_2.raw High LTSIIFAEDITTGQVLR Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 212 4.04 0.00 0 14 25 2 939.02533 1877.04338 2.90 42.72 4419 4419 MS2 22/32 Linfeng_122411_rIgG_2.raw High AVDPTSGQLYGLAR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 467 3.68 0.00 0 27 25 3 483.25677 1447.75577 1.20 30.67 2890 2890 MS2 29/52 Linfeng_122411_rIgG_2.raw High GVAIGQTSLTASVTNK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 326 3.42 0.00 0 6 25 2 773.92651 1546.84575 1.40 27.89 2522 2522 MS2 24/30 Linfeng_122411_rIgG_2.raw High AVDPTSGQLYGLAR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 412 3.31 0.00 0 8 25 2 724.38165 1447.75603 1.38 30.61 2882 2882 MS2 22/26 Linfeng_122411_rIgG_2.raw High ELYLEDSPLELK Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 395 3.25 0.00 0 10 25 2 724.88135 1448.75542 2.39 37.85 3804 3804 MS2 19/22 Linfeng_122411_rIgG_2.raw High VFGAPEVLENLEVK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 443 3.19 0.00 0 12 25 2 772.42407 1543.84087 2.69 40.63 4155 4155 MS2 23/26 Linfeng_122411_rIgG_2.raw High VGQALELPLR Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 157 2.94 0.00 0 14 25 2 548.33130 1095.65532 2.91 32.40 3114 3114 MS2 17/18 Linfeng_122411_rIgG_2.raw High DDFVQIGK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 300 2.61 0.00 0 43 25 2 461.23816 921.46904 1.49 26.23 2299 2299 MS2 13/14 Linfeng_122411_rIgG_2.raw High ITIAAYLPLK Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 55 2.15 0.00 0 4 25 2 551.84814 1102.68901 1.73 39.00 3949 3949 MS2 16/18 Linfeng_122411_rIgG_2.raw High TVSVGLTLLR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 124 2.06 0.00 0 2 25 2 529.83313 1058.65898 1.99 34.97 3440 3440 MS2 17/18 Linfeng_122411_rIgG_2.raw High SGSPAVLAFAK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 337 2.05 0.00 0 27 25 2 524.29462 1047.58196 -1.36 30.00 2802 2802 MS2 13/20 Linfeng_122411_rIgG_2.raw IPI00291916.5 PH-interacting protein 5.00 1 6 6 6 15.63 5.00 6 6 1821 206.5 8.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LGPLLEQEIPQSVPGVQTLLGAGR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 80 3.31 0.00 0 5 25 3 824.80182 2472.39090 3.53 45.32 4751 4751 MS2 29/92 Linfeng_122411_rIgG_2.raw High YHDMPDVIDFLVLR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 429 2.91 0.00 0 28 25 3 578.29761 1732.87827 3.17 46.42 4891 4891 MS2 23/52 Linfeng_122411_rIgG_2.raw Medium SLIYKPLDGEWGTNPRDEEcER Unambiguous 1 1 IPI00291916.5 C20(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.83 0.00 1 14 25 4 666.81573 2664.24111 1.93 31.14 2951 2951 MS2 29/126 Linfeng_122411_rIgG_2.raw High VYFFGSGQPEK Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 269 2.34 0.00 0 47 25 2 629.81061 1258.61394 2.88 30.73 2897 2897 MS2 16/20 Linfeng_122411_rIgG_2.raw High IFTGSDDcLVK Unambiguous 1 1 IPI00291916.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 228 2.20 0.00 0 40 25 2 627.80634 1254.60539 1.49 26.96 2397 2397 MS2 17/20 Linfeng_122411_rIgG_2.raw High SELYFLIAR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 308 2.05 0.00 0 15 25 2 556.31256 1111.61785 2.86 39.24 3979 3979 MS2 14/16 Linfeng_122411_rIgG_2.raw IPI00292135.1 Lamin-B receptor 6.18 1 3 3 10 28.86 6.18 3 10 615 70.7 9.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 208 5.00 0.00 0 5 25 2 1015.48395 2029.96062 -0.42 44.88 5062 5062 MS2 26/36 Linfeng_122411_rIgG_5.raw High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 230 4.50 0.00 0 5 25 2 1015.48846 2029.96965 4.03 44.97 4861 4861 MS2 24/36 Linfeng_122411_rIgG_6.raw High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 249 3.89 0.00 0 5 25 3 677.32745 2029.96781 3.12 44.94 4858 4858 MS2 33/72 Linfeng_122411_rIgG_6.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 275 2.40 0.00 0 35 25 2 578.32330 1155.63933 2.12 19.78 1692 1692 MS2 15/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 269 2.39 0.00 0 29 25 2 578.32330 1155.63933 2.12 20.78 1812 1812 MS2 15/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 320 2.30 0.00 0 54 25 2 578.32397 1155.64067 3.28 17.74 1478 1478 MS2 14/20 Linfeng_122411_rIgG_5.raw High TFEVTPIR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 347 2.18 0.00 0 21 25 2 481.76883 962.53038 -0.23 26.46 2547 2547 MS2 11/14 Linfeng_122411_rIgG_5.raw High TFEVTPIR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 361 2.11 0.00 0 10 25 2 481.76962 962.53197 1.42 28.02 2711 2711 MS2 10/14 Linfeng_122411_rIgG_6.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 262 2.07 0.00 0 39 25 2 578.32367 1155.64006 2.75 18.76 1583 1583 MS2 12/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 286 2.02 0.00 0 67 25 2 578.32324 1155.63921 2.01 21.83 1939 1939 MS2 13/20 Linfeng_122411_rIgG_5.raw IPI00293464.5 DNA damage-binding protein 1 7.11 2 5 5 5 15.76 7.11 5 5 1140 126.9 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IEVQDTSGGTTALRPSASTQALSSSVSSSK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 279 5.44 0.00 0 0 25 3 984.83411 2952.48777 4.07 27.38 2427 2427 MS2 41/116 Linfeng_122411_rIgG_3.raw High IGRPSETGIIGIIDPEcR Unambiguous 1 1 IPI00293464.5 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 3.10 0.00 0 24 25 3 661.68390 1983.03714 2.14 36.61 3620 3620 MS2 33/68 Linfeng_122411_rIgG_3.raw High EATADDLIKVVEELTR Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 401 2.81 0.00 1 11 25 3 601.32495 1801.96030 3.34 50.13 5360 5360 MS2 24/60 Linfeng_122411_rIgG_3.raw High DLLFILTAK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 125 2.26 0.00 0 36 25 2 517.31982 1033.63237 3.01 45.49 4768 4768 MS2 13/16 Linfeng_122411_rIgG_3.raw High LYEWTTEK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 221 2.15 0.00 0 45 25 2 535.26477 1069.52226 2.04 26.09 2253 2253 MS2 12/14 Linfeng_122411_rIgG_3.raw IPI00297241.4 Nucleolar pre-ribosomal-associated protein 1 2.77 1 4 4 4 11.94 2.77 4 4 2271 254.2 6.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQEQSQLLYLLDVVR Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 287 3.42 0.00 0 30 25 3 617.67358 1851.00620 2.73 47.61 5042 5042 MS2 25/56 Linfeng_122411_rIgG_2.raw High DPVLAPAVGADLLDYcLAR Unambiguous 1 1 IPI00297241.4 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.14 0.00 0 24 25 3 677.02100 2029.04844 2.98 45.53 4778 4778 MS2 31/72 Linfeng_122411_rIgG_2.raw High TAADDDLVADLVVNILK Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 352 2.92 0.00 0 31 25 3 595.66162 1784.97031 3.47 55.42 5966 5966 MS2 28/64 Linfeng_122411_rIgG_2.raw High ISTINILLSTLK Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 31 2.45 0.00 0 41 25 2 658.41553 1315.82378 3.19 44.96 4705 4705 MS2 19/22 Linfeng_122411_rIgG_2.raw IPI00300052.1 "Keratin, type II cuticular Hb4" 11.33 2 3 8 22 57.96 11.33 8 22 600 64.9 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 381 3.57 0.00 0 6 25 2 650.36353 1299.71977 3.26 43.51 4269 4269 MS2 19/22 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 373 3.36 0.00 0 20 25 2 650.36353 1299.71977 3.26 42.13 4094 4094 MS2 19/22 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 368 3.27 0.00 0 27 25 2 650.36328 1299.71929 2.89 37.69 3536 3536 MS2 19/22 Linfeng_122411_rIgG_9.raw High LcEGVGPVNISVSSSR Unambiguous 1 1 IPI00300052.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.26 0.00 0 10 25 2 830.92236 1660.83745 3.06 29.53 2492 2492 MS2 20/30 Linfeng_122411_rIgG_9.raw High LcEGVGPVNISVSSSR Unambiguous 1 1 IPI00300052.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 436 3.03 0.00 0 8 25 3 554.28326 1660.83524 1.72 29.59 2501 2501 MS2 24/60 Linfeng_122411_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LGLDIEIATYR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 318 2.80 0.00 0 32 25 2 632.35175 1263.69621 1.45 38.44 3630 3630 MS2 17/20 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 437 2.80 0.00 0 18 25 3 433.91092 1299.71820 2.06 37.82 3552 3552 MS2 27/44 Linfeng_122411_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High VAPATGDLLSTGTR Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 515 2.67 0.00 0 36 25 2 679.86865 1358.73003 1.87 26.63 2469 2469 MS2 19/26 Linfeng_122411_rIgG_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw Medium LGLDIEIATYRR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 324 2.38 0.00 1 17 25 3 473.93719 1419.79703 1.08 34.46 3132 3132 MS2 22/44 Linfeng_122411_rIgG_9.raw Medium DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 394 2.33 0.00 0 7 25 3 433.91104 1299.71857 2.34 43.58 4278 4278 MS2 27/44 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 377 2.29 0.00 0 19 25 2 650.36304 1299.71880 2.51 38.99 3697 3697 MS2 15/22 Linfeng_122411_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw IPI00300053.4 "Keratin, type II cuticular Hb2" 4.29 1 1 3 3 7.32 4.29 3 3 513 56.6 6.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LGLDIEIATYR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 318 2.80 0.00 0 32 25 2 632.35175 1263.69621 1.45 38.44 3630 3630 MS2 17/20 Linfeng_122411_rIgG_9.raw Medium LGLDIEIATYRR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 324 2.38 0.00 1 17 25 3 473.93719 1419.79703 1.08 34.46 3132 3132 MS2 22/44 Linfeng_122411_rIgG_9.raw High LAGLEEALQK Unambiguous 1 1 IPI00300053.4 CID 1.0000 0.0000 1 1 372 2.14 0.00 0 39 25 2 536.30585 1071.60442 -0.09 28.95 2888 2888 MS2 15/18 Linfeng_122411_rIgG_5.raw IPI00307466.2 Isoform 2 of Serpin B3 14.79 2 4 4 5 15.06 14.79 4 5 338 38.5 6.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FYQTSVESVDFANAPEESR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 148 4.44 0.00 0 13 25 3 726.00116 2175.98893 2.72 33.00 3361 3361 MS2 32/72 Linfeng_122411_rIgG_6.raw High INSWVESQTNEK Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 246 3.29 0.00 0 15 25 2 717.84717 1434.68706 0.74 23.63 2117 2117 MS2 19/22 Linfeng_122411_rIgG_6.raw High TNSILFYGR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 353 2.81 0.00 0 12 25 2 535.78613 1070.56499 1.90 31.87 3215 3215 MS2 15/16 Linfeng_122411_rIgG_6.raw High TNSILFYGR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 328 2.28 0.00 0 47 25 2 535.78552 1070.56377 0.76 31.14 2795 2795 MS2 13/16 Linfeng_122411_rIgG_10.raw High GLVLSGVLHK Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 59 2.25 0.00 0 30 25 2 511.82138 1022.63548 -0.25 29.19 2867 2867 MS2 12/18 Linfeng_122411_rIgG_6.raw IPI00383565.5 Isoform 2 of Bromodomain adjacent to zinc finger domain protein 1A 3.48 2 4 4 4 12.05 3.48 4 4 1524 175.3 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFIEDYVDILR Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 326 3.36 0.00 0 25 25 2 699.35291 1397.69853 2.68 47.65 5048 5048 MS2 17/20 Linfeng_122411_rIgG_2.raw High LGLHVTPSNVDQVSTPPAAK Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 381 3.17 0.00 0 27 25 3 677.70190 2031.09116 2.04 26.39 2321 2321 MS2 28/76 Linfeng_122411_rIgG_2.raw High SLDLDScTLSEILR Unambiguous 2 1 IPI00383565.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 3.04 0.00 0 9 25 2 811.41119 1621.81511 3.01 42.70 4416 4416 MS2 21/26 Linfeng_122411_rIgG_2.raw High LLTLVSTR Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 91 2.48 0.00 0 28 25 2 451.78751 902.56774 0.84 28.31 2578 2578 MS2 12/14 Linfeng_122411_rIgG_2.raw IPI00456004.5 Isoform 2 of ATPase family AAA domain-containing protein 2B 3.65 2 3 5 5 11.96 3.65 5 5 1453 164.2 6.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPEEScAQIFR Unambiguous 2 1 IPI00456004.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 170 2.63 0.00 0 31 25 2 669.31311 1337.61894 2.59 24.19 2031 2031 MS2 16/20 Linfeng_122411_rIgG_2.raw High AEDLASGILR Unambiguous 2 1 IPI00456004.5 CID 1.0000 0.0000 1 1 622 2.55 0.00 0 25 25 2 522.78894 1044.57060 2.05 30.34 2847 2847 MS2 17/18 Linfeng_122411_rIgG_2.raw High GcLFYGPPGTGK Unambiguous 3 2 IPI00170548.1;IPI00456004.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 2.43 0.00 0 28 25 2 627.30408 1253.60088 2.00 29.07 2680 2680 MS2 17/22 Linfeng_122411_rIgG_2.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 365 2.24 0.00 0 66 25 2 500.27814 999.54900 2.01 25.76 2236 2236 MS2 13/16 Linfeng_122411_rIgG_2.raw High SFNNILAVLQK Unambiguous 2 1 IPI00456004.5 CID 1.0000 0.0000 1 1 216 2.11 0.00 0 24 25 2 623.86328 1246.71929 3.08 40.91 4189 4189 MS2 15/20 Linfeng_122411_rIgG_2.raw IPI00479823.3 Putative uncharacterized protein RSF1 3.64 3 4 4 4 12.72 3.64 4 4 0.00 1400 159.2 5.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RGEGEDEVEEESTALQK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 149 3.80 0.00 1 9 25 3 635.96240 1905.87265 2.80 24.06 2015 2015 MS2 26/64 Linfeng_122411_rIgG_2.raw High YLcEcQFDDNLK Unambiguous 3 1 IPI00479823.3 C3(Carbamidomethyl); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 3.52 0.00 0 6 25 2 802.84174 1604.67620 2.61 29.56 2743 2743 MS2 20/22 Linfeng_122411_rIgG_2.raw High NRNELAETLALLK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 378 3.27 0.00 1 8 25 3 495.61951 1484.84397 0.52 37.59 3770 3770 MS2 30/48 Linfeng_122411_rIgG_2.raw High AQIDPVLLK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 113 2.13 0.00 0 9 25 2 498.80893 996.61058 1.73 29.43 2726 2726 MS2 13/16 Linfeng_122411_rIgG_2.raw IPI00643041.3 GTP-binding nuclear protein Ran 16.20 4 3 3 3 7.02 16.20 3 3 216 24.4 7.49 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FNVWDTAGQEK Unambiguous 4 1 IPI00643041.3 CID 1.0000 0.0000 1 1 175 2.58 0.00 0 20 25 2 647.80750 1294.60771 1.09 30.52 2776 2776 MS2 17/20 Linfeng_122411_rIgG_8.raw Medium SNYNFEKPFLWLAR Unambiguous 4 1 IPI00643041.3 CID 1.0000 0.0000 1 1 370 2.43 0.00 0 15 25 3 595.64307 1784.91465 1.52 40.91 4105 4105 MS2 21/52 Linfeng_122411_rIgG_8.raw High NLQYYDISAK Unambiguous 4 1 IPI00643041.3 CID 1.0000 0.0000 1 1 238 2.01 0.00 0 6 25 2 607.80719 1214.60710 1.57 25.89 2179 2179 MS2 15/18 Linfeng_122411_rIgG_8.raw IPI00645646.1 17 kDa protein 21.52 2 1 3 4 10.63 21.52 3 4 158 17.3 9.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFLAGGIAAAISK Unambiguous 2 1 IPI00645646.1 CID 1.0000 0.0000 1 1 322 3.14 0.00 0 27 25 2 617.34692 1233.68657 2.21 40.09 3678 3678 MS2 21/24 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 494 3.00 0.00 0 12 25 3 482.91943 1446.74375 1.44 41.36 3840 3840 MS2 28/44 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 379 2.48 0.00 0 4 25 2 723.87616 1446.74504 2.34 41.30 3832 3832 MS2 20/22 Linfeng_122411_rIgG_7.raw High EQGVLSFWR Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 341 2.01 0.00 0 5 25 2 561.29144 1121.57561 1.55 37.97 3417 3417 MS2 13/16 Linfeng_122411_rIgG_7.raw IPI00759742.2 Isoform 1 of Bromodomain adjacent to zinc finger domain protein 2A 3.83 3 4 4 4 12.68 3.83 4 4 1878 208.3 6.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GQDSEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHK Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 183 4.61 0.00 0 1 25 4 974.99823 3896.97109 1.83 31.36 2979 2979 MS2 41/204 Linfeng_122411_rIgG_2.raw High DGEVDATASSIPELER Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 220 3.22 0.00 0 3 25 2 844.90405 1688.80083 2.01 31.85 3044 3044 MS2 22/30 Linfeng_122411_rIgG_2.raw High SGYSLNFSEGDGR Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 73 2.77 0.00 0 16 25 2 694.80945 1388.61162 2.79 29.35 2716 2716 MS2 18/24 Linfeng_122411_rIgG_2.raw High DNVSEILR Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 446 2.08 0.00 0 28 25 2 473.25397 945.50066 0.66 27.21 2431 2431 MS2 13/14 Linfeng_122411_rIgG_2.raw IPI00783781.2 Nuclear pore complex protein Nup205 3.03 1 3 3 3 9.12 3.03 3 3 2012 227.8 6.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High cQDVSAGSLQELALLTGIISK Unambiguous 1 1 IPI00783781.2 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 321 3.92 0.00 0 13 25 3 735.06293 2203.17423 4.66 49.34 5260 5260 MS2 32/80 Linfeng_122411_rIgG_2.raw Medium SGLAIVSQHDLDQLQADAINAFGESLQKK Unambiguous 1 1 IPI00783781.2 CID 1.0000 0.0000 1 1 225 2.79 0.00 1 24 25 4 774.90710 3096.60659 3.37 46.13 4854 4854 MS2 37/168 Linfeng_122411_rIgG_2.raw High VLVDSLVEDDR Unambiguous 1 1 IPI00783781.2 CID 1.0000 0.0000 1 1 449 2.42 0.00 0 17 25 2 630.32892 1259.65056 2.16 31.25 2965 2965 MS2 16/20 Linfeng_122411_rIgG_2.raw IPI00853641.1 Putative uncharacterized protein HBE1 43.68 2 3 3 4 13.99 43.68 3 4 87 9.5 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FFDSFGNLSSPSAILGNPK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 265 4.92 0.00 0 0 25 2 999.50476 1998.00224 2.72 42.21 4221 4221 MS2 26/36 Linfeng_122411_rIgG_10.raw High FFDSFGNLSSPSAILGNPK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 342 4.62 0.00 0 34 25 3 666.67291 1998.00418 3.69 42.17 4215 4215 MS2 34/72 Linfeng_122411_rIgG_10.raw High AAVTSLWSK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 333 2.39 0.00 0 18 25 2 481.76968 962.53209 1.55 27.29 2276 2276 MS2 15/16 Linfeng_122411_rIgG_10.raw High LLVVYPWTQR Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 227 2.05 0.00 0 38 25 2 637.86804 1274.72881 2.51 38.32 3723 3723 MS2 15/18 Linfeng_122411_rIgG_10.raw IPI00873948.3 DNA-directed RNA polymerase 3.91 4 3 3 3 8.12 3.91 3 3 0.00 1099 125.1 8.29 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VSANKGEIGDATPFNDAVNVQK Unambiguous 4 1 IPI00873948.3 CID 1.0000 0.0000 1 1 372 3.71 0.00 1 24 25 3 758.71875 2274.14170 2.43 27.87 2490 2490 MS2 34/84 Linfeng_122411_rIgG_3.raw Medium ISNLLSDYGYHLR Unambiguous 4 1 IPI00873948.3 CID 1.0000 0.0000 1 1 401 2.34 0.00 0 25 25 3 517.60437 1550.79856 1.52 34.03 3292 3292 MS2 26/48 Linfeng_122411_rIgG_3.raw High GPIQILNR Unambiguous 4 1 IPI00873948.3 CID 1.0000 0.0000 1 1 110 2.07 0.00 0 31 25 2 455.77808 910.54888 2.15 27.76 2475 2475 MS2 12/14 Linfeng_122411_rIgG_3.raw IPI00893580.1 HLA-B associated transcript 1 9.45 6 3 3 5 11.61 9.45 3 5 328 38.2 7.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLAITFVSDENDAK Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 349 2.79 0.00 0 43 25 2 740.36957 1479.73186 -0.53 33.46 3506 3506 MS2 21/26 Linfeng_122411_rIgG_5.raw High ILVATNLFGR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 177 2.25 0.00 0 24 15 2 552.33197 1103.65666 -0.50 36.47 3922 3922 MS2 16/18 Linfeng_122411_rIgG_5.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 378 2.22 0.00 0 6 25 2 453.73749 906.46770 -0.33 29.55 2971 2971 MS2 10/12 Linfeng_122411_rIgG_5.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 360 2.22 0.00 0 21 25 2 453.73868 906.47008 2.29 28.86 2404 2404 MS2 11/12 Linfeng_122411_rIgG_9.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 340 2.12 0.00 0 12 25 2 453.73837 906.46947 1.62 30.32 3015 3015 MS2 11/12 Linfeng_122411_rIgG_6.raw IPI00895865.1 "electron transfer flavoprotein subunit alpha, mitochondrial isoform b" 22.18 3 4 4 5 15.13 22.18 4 5 284 30.0 8.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLLPEELTPLILATQK Unambiguous 2 1 IPI00895865.1 CID 1.0000 0.0000 1 1 65 3.39 0.00 0 12 25 3 579.34613 1736.02384 1.92 46.12 4442 4442 MS2 29/60 Linfeng_122411_rIgG_7.raw High ASSTSPVEISEWLDQK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 314 3.14 0.00 0 35 25 3 592.96118 1776.86899 2.18 38.47 3477 3477 MS2 27/60 Linfeng_122411_rIgG_7.raw High GLLPEELTPLILATQK Unambiguous 2 1 IPI00895865.1 CID 1.0000 0.0000 1 1 57 2.96 0.00 0 17 25 2 868.51654 1736.02580 3.05 46.14 4444 4444 MS2 20/30 Linfeng_122411_rIgG_7.raw High LEVAPISDIIAIK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 80 2.87 0.00 0 12 25 2 691.42023 1381.83318 2.18 41.21 3820 3820 MS2 20/24 Linfeng_122411_rIgG_7.raw High GTSFDAAATSGGSASSEK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 94 2.77 0.00 0 37 25 2 815.86578 1630.72429 3.13 20.42 1493 1493 MS2 19/34 Linfeng_122411_rIgG_7.raw IPI00910934.2 Isoform 5 of Putative oxidoreductase GLYR1 17.80 5 6 6 8 14.68 10.38 4 5 8.94 10.17 3 3 472 51.5 8.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPAEVVSTcDITFAcVSDPK Unambiguous 5 1 IPI00910934.2 C9(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 181 4.13 0.00 0 4 100 2 1099.01953 2197.03179 7.53 42.46 5459 5459 MS2 20/38 Linfeng_20120125_PCAF_4.raw High TAEKcDLFIQEGAR Unambiguous 3 1 IPI00910934.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 4.06 0.00 1 28 25 3 546.60468 1637.79947 2.57 22.15 1883 1883 MS2 28/52 Linfeng_122411_rIgG_4.raw High TSFFLGEVGNAAK Unambiguous 5 1 IPI00910934.2 CID 1.0000 0.0000 1 1 351 3.37 0.00 0 27 25 2 670.84692 1340.68657 1.50 34.70 3523 3523 MS2 19/24 Linfeng_122411_rIgG_4.raw High TAEKcDLFIQEGAR Unambiguous 3 1 IPI00910934.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 313 2.80 0.00 1 33 25 3 546.60437 1637.79856 2.01 23.17 2004 2004 MS2 25/52 Linfeng_122411_rIgG_4.raw High TSFFLGEVGNAAK Unambiguous 5 1 IPI00910934.2 CID 1.0000 0.0000 1 1 366 2.52 0.00 0 16 100 2 670.85028 1340.69328 6.51 44.69 5998 5998 MS2 19/24 Linfeng_20120125_PCAF_4.raw High ALDQSDNDMSAVYR Unambiguous 5 1 IPI00910934.2 CID 1.0000 0.0000 1 1 96 2.29 0.00 0 11 25 2 792.85425 1584.70122 3.34 25.80 2358 2358 MS2 18/26 Linfeng_122411_rIgG_4.raw High GLYEDcSScFQAMGK Unambiguous 5 1 IPI00910934.2 C6(Carbamidomethyl); C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 2.28 0.00 0 7 100 2 876.86169 1752.71611 7.66 34.69 3665 3665 MS2 19/28 Linfeng_20120125_PCAF_4.raw High LGDLVWGK Unambiguous 4 1 IPI00910934.2 CID 1.0000 0.0000 1 1 780 2.16 0.00 0 23 25 2 444.25397 887.50066 2.34 31.92 3165 3165 MS2 13/14 Linfeng_122411_rIgG_4.raw IPI00915274.1 h/ACA ribonucleoprotein complex subunit 4 isoform 2 8.45 4 3 3 4 10.39 8.45 3 4 509 57.0 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDTSQWPLLLK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 284 2.87 0.00 0 53 25 2 657.37817 1313.74907 2.02 41.99 4681 4681 MS2 15/20 Linfeng_122411_rIgG_5.raw High ALETLTGALFQRPPLIAAVK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 39 2.61 0.00 0 12 25 3 703.75476 2109.24973 3.12 41.84 4419 4419 MS2 24/76 Linfeng_122411_rIgG_4.raw High DSAVNAIcYGAK Unambiguous 4 1 IPI00915274.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 2.61 0.00 0 53 25 2 634.80182 1268.59636 1.85 22.24 1894 1894 MS2 18/22 Linfeng_122411_rIgG_4.raw High LDTSQWPLLLK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 285 2.30 0.00 0 37 25 2 657.37878 1313.75029 2.95 41.98 4436 4436 MS2 13/20 Linfeng_122411_rIgG_4.raw IPI00922068.1 Isoform 5 of Insulin-like growth factor 2 mRNA-binding protein 2 8.11 6 1 3 3 8.56 8.11 3 3 0.00 493 54.7 7.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00940014.1 CID 1.0000 0.0000 1 2 48 3.54 0.00 0 9 25 3 485.97083 1455.89792 3.08 45.22 4845 4845 MS2 29/52 Linfeng_122411_rIgG_4.raw High IIGHFFASQTAQR Unambiguous 6 1 IPI00922068.1 CID 1.0000 0.0000 1 1 470 2.86 0.00 0 66 25 3 492.59729 1475.77732 1.28 26.30 2426 2426 MS2 22/48 Linfeng_122411_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00940014.1;IPI00922068.1 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw IPI00922826.1 "cDNA FLJ51392, highly similar to Keratin, type II cuticular Hb5" 10.85 6 2 4 4 10.57 10.85 4 4 295 32.4 5.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLNMDcIIAEIK Unambiguous 5 1 IPI00922826.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 289 3.07 0.00 0 29 25 2 717.85431 1434.70134 3.17 43.91 4681 4681 MS2 18/22 Linfeng_122411_rIgG_4.raw High LGLDIEIATYR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 318 2.80 0.00 0 32 25 2 632.35175 1263.69621 1.45 38.44 3630 3630 MS2 17/20 Linfeng_122411_rIgG_9.raw Medium LGLDIEIATYRR Unambiguous 8 3 IPI00922826.1;IPI00300052.1;IPI00300053.4 CID 1.0000 0.0000 1 1 324 2.38 0.00 1 17 25 3 473.93719 1419.79703 1.08 34.46 3132 3132 MS2 22/44 Linfeng_122411_rIgG_9.raw High AEAESWYR Unambiguous 6 1 IPI00922826.1 CID 1.0000 0.0000 1 1 83 2.32 0.00 0 31 25 2 506.22931 1011.45134 -1.71 4.58 536 536 MS2 13/14 Linfeng_122411_rIgG_4.raw IPI00930678.1 small nuclear ribonucleoprotein Sm D2 isoform 2 25.93 2 3 3 3 9.95 25.93 3 3 108 12.4 9.89 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High REEEEFNTGPLSVLTQSVK Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 365 4.39 0.00 1 9 25 3 721.70386 2163.09702 1.90 38.40 3732 3732 MS2 30/72 Linfeng_122411_rIgG_10.raw High EEEEFNTGPLSVLTQSVK Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 331 3.48 0.00 0 15 25 3 669.67084 2006.99796 3.08 42.14 4212 4212 MS2 31/68 Linfeng_122411_rIgG_10.raw High GDSVIVVLR Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 560 2.08 0.00 0 47 25 2 479.28751 957.56774 -5.30 29.26 2543 2543 MS2 15/16 Linfeng_122411_rIgG_10.raw IPI00000686.2 Probable RNA-binding protein 19 4.38 1 3 3 4 8.59 4.38 3 4 960 107.3 6.51 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VALGETQLVQEVR Unambiguous 1 1 IPI00000686.2 CID 1.0000 0.0000 1 1 363 2.31 0.00 0 18 100 2 721.40839 1441.80950 5.90 37.67 4078 4078 MS2 18/24 Linfeng_20120125_PCAF_2.raw High ILGENEEEEDLAESGR Unambiguous 1 1 IPI00000686.2 CID 1.0000 0.0000 1 1 128 2.18 0.00 0 23 100 2 895.41315 1789.81902 5.74 30.01 2632 2632 MS2 19/30 Linfeng_20120125_PCAF_2.raw High NLPYTSTEEDLEK Unambiguous 1 1 IPI00000686.2 CID 1.0000 0.0000 1 1 205 2.06 0.00 0 21 100 2 769.86987 1538.73247 6.73 30.83 2778 2778 MS2 10/24 Linfeng_20120125_PCAF_2.raw High NLPYTSTEEDLEK Unambiguous 1 1 IPI00000686.2 CID 1.0000 0.0000 1 1 195 2.04 0.00 0 12 100 2 769.86914 1538.73100 5.78 30.72 2755 2755 MS2 11/24 Linfeng_20120125_PCAF_2.raw IPI00002993.1 Transcription initiation factor TFIID subunit 9 12.50 1 3 3 4 8.71 12.50 3 4 264 29.0 8.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FTVQMPTSQSPAVK Unambiguous 1 1 IPI00002993.1 CID 1.0000 0.0000 1 1 415 2.44 0.00 0 4 100 2 760.89795 1520.78862 7.11 34.27 3319 3319 MS2 17/26 Linfeng_20120125_PCAF_7.raw High DMGITEYEPR Unambiguous 1 1 IPI00002993.1 CID 1.0000 0.0000 1 1 123 2.11 0.00 0 51 100 2 605.77850 1210.54973 7.28 31.44 2725 2725 MS2 15/18 Linfeng_20120125_PCAF_7.raw High YcLTAPNYR Unambiguous 1 1 IPI00002993.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 2.11 0.00 0 16 100 2 579.27728 1157.54729 5.58 26.92 2038 2038 MS2 11/16 Linfeng_20120125_PCAF_7.raw High YcLTAPNYR Unambiguous 1 1 IPI00002993.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.04 0.00 0 8 100 2 579.27808 1157.54888 6.95 26.83 2024 2024 MS2 12/16 Linfeng_20120125_PCAF_7.raw IPI00008200.2 YEATS domain-containing protein 2 6.40 1 5 5 10 31.70 6.40 5 10 1422 150.7 8.98 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AIVSGGGGTIVAQPVQTLTK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 124 3.89 0.00 0 20 100 2 949.04865 1897.09001 7.70 37.63 4072 4072 MS2 23/38 Linfeng_20120125_PCAF_3.raw High VKTEPETPGPScLSQEGQTAVK Unambiguous 1 1 IPI00008200.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 3.82 0.00 1 19 100 3 781.72711 2343.16678 7.26 25.00 1940 1940 MS2 26/84 Linfeng_20120125_PCAF_1.raw High AIVSGGGGTIVAQPVQTLTK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 120 3.75 0.00 0 15 100 2 949.04889 1897.09050 7.96 37.45 4040 4040 MS2 23/38 Linfeng_20120125_PCAF_2.raw High VKTEPETPGPScLSQEGQTAVK Unambiguous 1 1 IPI00008200.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 3.68 0.00 1 54 100 3 781.72687 2343.16605 6.95 24.96 1932 1932 MS2 28/84 Linfeng_20120125_PCAF_1.raw High VKTEPETPGPScLSQEGQTAVK Unambiguous 1 1 IPI00008200.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 360 3.38 0.00 1 59 100 3 781.72772 2343.16861 8.04 25.12 1966 1966 MS2 30/84 Linfeng_20120125_PCAF_1.raw High AATPTVVSATSLVPTPNPISGK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 160 3.19 0.00 0 49 100 2 1054.58875 2108.17021 4.91 44.18 5407 5407 MS2 19/42 Linfeng_20120125_PCAF_2.raw High VKTEPETPGPScLSQEGQTAVK Unambiguous 1 1 IPI00008200.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 3.12 0.00 1 22 100 3 781.72662 2343.16532 6.63 25.02 1840 1840 MS2 27/84 Linfeng_20120125_PCAF_2.raw High AIVSGGGGTIVAQPVQTLTK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 119 2.55 0.00 0 7 100 2 949.04767 1897.08806 6.67 37.38 4888 4888 MS2 19/38 Linfeng_20120125_PCAF_1.raw High SVEQYYGWNIGK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 234 2.30 0.00 0 32 100 2 722.35358 1443.69988 6.60 39.97 5498 5498 MS2 16/22 Linfeng_20120125_PCAF_1.raw High VVGVPVGSALPSTVK Unambiguous 1 1 IPI00008200.2 CID 1.0000 0.0000 1 1 102 2.02 0.00 0 24 100 2 705.42572 1409.84416 5.56 36.02 4558 4558 MS2 15/28 Linfeng_20120125_PCAF_1.raw IPI00010438.2 Isoform SNAP-23a of Synaptosomal-associated protein 23 23.22 1 3 3 4 13.20 23.22 3 4 211 23.3 5.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TTWGDGGENSPcNVVSK Unambiguous 1 1 IPI00010438.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 153 4.20 0.00 0 7 100 2 904.40588 1807.80449 7.11 24.17 1837 1837 MS2 24/32 Linfeng_20120125_PCAF_8.raw High DMALNIGNEIDAQNPQIK Unambiguous 1 1 IPI00010438.2 CID 1.0000 0.0000 1 1 291 3.69 0.00 0 56 97 2 992.49768 1983.98808 3.81 43.03 6444 6444 MS2 20/34 Linfeng_20120125_PCAF_8.raw High DMALNIGNEIDAQNPQIK Unambiguous 1 1 IPI00010438.2 CID 1.0000 0.0000 1 1 307 2.96 0.00 0 78 100 2 992.49750 1983.98772 3.63 43.16 6479 6479 MS2 18/34 Linfeng_20120125_PCAF_8.raw High ILGLAIESQDAGIK Unambiguous 1 1 IPI00010438.2 CID 1.0000 0.0000 1 1 265 2.35 0.00 0 22 100 2 714.41174 1427.81621 4.00 44.08 6718 6718 MS2 20/26 Linfeng_20120125_PCAF_8.raw IPI00011253.3 40S ribosomal protein S3 19.75 1 4 4 6 14.35 19.75 4 6 243 26.7 9.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KPLPDHVSIVEPK Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 293 2.77 0.00 0 20 100 3 486.95132 1458.83942 5.39 28.65 2297 2297 MS2 19/48 Linfeng_20120125_PCAF_7.raw High ELAEDGYSGVEVR Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 247 2.48 0.00 0 16 100 2 712.34387 1423.68047 7.33 26.45 1971 1971 MS2 17/24 Linfeng_20120125_PCAF_7.raw High ELAEDGYSGVEVR Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 236 2.42 0.00 0 4 100 2 712.34283 1423.67839 5.87 25.89 1906 1906 MS2 16/24 Linfeng_20120125_PCAF_7.raw Medium KPLPDHVSIVEPK Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 279 2.31 0.00 0 22 100 3 486.95142 1458.83969 5.58 28.81 2318 2318 MS2 21/48 Linfeng_20120125_PCAF_7.raw High DEILPTTPISEQK Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 420 2.31 0.00 0 36 100 2 735.89325 1470.77922 7.17 33.61 3172 3172 MS2 15/24 Linfeng_20120125_PCAF_7.raw High TEIIILATR Unambiguous 1 1 IPI00011253.3 CID 1.0000 0.0000 1 1 218 2.06 0.00 0 39 100 2 515.32251 1029.63774 7.21 40.15 4612 4612 MS2 14/16 Linfeng_20120125_PCAF_7.raw IPI00029778.3 Isoform 1 of Tumor suppressor p53-binding protein 1 12.68 5 13 13 24 73.54 12.68 13 24 1972 213.4 4.70 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SATVKPGAVGAGEFVSPcESGDNTGEPSALEEQR Unambiguous 3 1 IPI00029778.3 C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 117 5.65 0.00 0 0 100 3 1145.20691 3433.60617 7.21 34.63 4223 4223 MS2 38/132 Linfeng_20120125_PCAF_1.raw High LSDVDANTAIKHEEQSNEDIPIAEQSSK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 229 4.52 0.00 1 9 100 3 1023.50092 3068.48819 7.37 32.37 3670 3670 MS2 36/108 Linfeng_20120125_PCAF_1.raw High SATVKPGAVGAGEFVSPcESGDNTGEPSALEEQR Unambiguous 3 1 IPI00029778.3 C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 118 4.49 0.00 0 0 100 3 1145.20520 3433.60105 5.72 34.78 4260 4260 MS2 41/132 Linfeng_20120125_PCAF_1.raw High ADDPLRLDQELQQPQTQEK Unambiguous 5 1 IPI00029778.3 CID 1.0000 0.0000 1 1 373 4.37 0.00 1 14 100 3 751.38354 2252.13608 9.17 35.76 4495 4495 MS2 31/72 Linfeng_20120125_PCAF_1.raw High ADDPLRLDQELQQPQTQEK Unambiguous 5 1 IPI00029778.3 CID 1.0000 0.0000 1 1 374 3.98 0.00 1 14 100 3 751.38275 2252.13370 8.11 35.78 4500 4500 MS2 35/72 Linfeng_20120125_PCAF_1.raw High ENPVLDVVSNPEQTAGEER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 218 3.65 0.00 0 0 100 2 1042.00806 2083.00884 7.16 38.97 5265 5265 MS2 21/36 Linfeng_20120125_PCAF_1.raw High SGTAETEPVEQDSSQPSLPLVR Unambiguous 5 1 IPI00029778.3 CID 1.0000 0.0000 1 1 258 3.41 0.00 0 0 100 2 1164.08105 2327.15483 7.99 36.59 4697 4697 MS2 22/42 Linfeng_20120125_PCAF_1.raw High VITDVYYVDGTEVER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 339 3.12 0.00 0 11 100 2 879.43835 1757.86943 5.77 36.05 4566 4566 MS2 21/28 Linfeng_20120125_PCAF_1.raw High KGVSQTGTPVcEEDGDAGLGIR Unambiguous 3 1 IPI00029778.3 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 3.02 0.00 1 35 100 3 749.36652 2246.08500 5.84 28.41 2721 2721 MS2 31/84 Linfeng_20120125_PCAF_1.raw High SGTAETEPVEQDSSQPSLPLVR Unambiguous 5 1 IPI00029778.3 CID 1.0000 0.0000 1 1 271 2.97 0.00 0 75 100 2 1164.07922 2327.15117 6.42 36.90 4770 4770 MS2 15/42 Linfeng_20120125_PCAF_1.raw High LVSPETEASEESLQFNLEKPATGER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 269 2.96 0.00 0 2 100 3 921.12885 2761.37198 6.95 41.70 5903 5903 MS2 29/96 Linfeng_20120125_PCAF_1.raw High VITDVYYVDGTEVER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 355 2.89 0.00 0 6 100 2 879.43872 1757.87016 6.19 35.64 4467 4467 MS2 23/28 Linfeng_20120125_PCAF_1.raw High LMLSTSEYSQSPK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 290 2.56 0.00 0 28 100 2 735.86481 1470.72234 5.31 28.68 2785 2785 MS2 17/24 Linfeng_20120125_PCAF_1.raw High NYLLPAGYSLEEQR Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 342 2.52 0.00 0 7 100 2 826.91821 1652.82915 0.75 43.42 6318 6318 MS2 17/26 Linfeng_20120125_PCAF_1.raw High AADISLDNLVEGK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 463 2.51 0.00 0 10 100 2 672.85559 1344.70391 2.45 43.58 6357 6357 MS2 19/24 Linfeng_20120125_PCAF_1.raw High LVSPETEASEESLQFNLEKPATGER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 281 2.51 0.00 0 6 100 3 921.12854 2761.37107 6.62 41.42 5838 5838 MS2 26/96 Linfeng_20120125_PCAF_1.raw High VPETVSAATQTIK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 449 2.49 0.00 0 46 100 2 672.87671 1344.74614 6.81 26.08 2167 2167 MS2 17/24 Linfeng_20120125_PCAF_1.raw High ENPVLDVVSNPEQTAGEER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 247 2.46 0.00 0 74 100 2 1042.00854 2083.00981 7.63 38.94 5257 5257 MS2 13/36 Linfeng_20120125_PCAF_1.raw High NYLLPAGYSLEEQR Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 336 2.42 0.00 0 14 100 2 826.91949 1652.83171 2.30 43.50 6337 6337 MS2 13/26 Linfeng_20120125_PCAF_1.raw High VITDVYYVDGTEVER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 349 2.36 0.00 0 10 100 2 879.43774 1757.86821 5.08 36.11 3773 3773 MS2 17/28 Linfeng_20120125_PCAF_2.raw High LMLSTSEYSQSPK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 257 2.35 0.00 0 43 100 2 735.86536 1470.72344 6.06 28.78 2808 2808 MS2 18/24 Linfeng_20120125_PCAF_1.raw High LMLSTSEYSQSPK Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 285 2.25 0.00 0 29 100 2 735.86511 1470.72295 5.73 28.56 2757 2757 MS2 18/24 Linfeng_20120125_PCAF_1.raw High ENPVLDVVSNPEQTAGEER Unambiguous 4 1 IPI00029778.3 CID 1.0000 0.0000 1 1 269 2.07 0.00 0 75 100 2 1042.00916 2083.01103 8.22 38.88 5244 5244 MS2 15/36 Linfeng_20120125_PCAF_1.raw High VDVScEPLEGVEK Unambiguous 5 1 IPI00029778.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 290 2.03 0.00 0 40 100 2 730.85413 1460.70098 4.90 29.79 3045 3045 MS2 16/24 Linfeng_20120125_PCAF_1.raw IPI00060046.1 Transcriptional adapter 1 14.63 1 4 4 10 26.97 14.63 4 10 335 37.4 7.39 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 425 3.16 0.00 1 38 100 3 491.91916 1473.74292 6.53 26.78 2246 2246 MS2 24/44 Linfeng_20120125_PCAF_6.raw High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 426 3.14 0.00 1 29 100 3 491.91840 1473.74063 4.98 26.39 2171 2171 MS2 22/44 Linfeng_20120125_PCAF_6.raw High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 421 2.84 0.00 1 37 100 3 491.91937 1473.74356 6.96 26.68 2226 2226 MS2 25/44 Linfeng_20120125_PCAF_6.raw High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 422 2.83 0.00 1 36 100 3 491.91898 1473.74237 6.16 26.60 2211 2211 MS2 23/44 Linfeng_20120125_PCAF_6.raw High EVIPTHTVYALNIER Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 331 2.77 0.00 0 39 100 2 877.98175 1754.95622 7.18 40.86 5260 5260 MS2 15/28 Linfeng_20120125_PCAF_6.raw High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 424 2.71 0.00 1 19 100 3 491.91898 1473.74237 6.16 26.18 2140 2140 MS2 19/44 Linfeng_20120125_PCAF_6.raw High ISKEEFDLEAHR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 423 2.64 0.00 1 35 100 3 491.91940 1473.74366 7.03 26.73 2235 2235 MS2 21/44 Linfeng_20120125_PCAF_6.raw High LWHPNHEELQQDK Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 308 2.55 0.00 0 17 100 3 558.60919 1673.81302 5.93 26.24 2150 2150 MS2 19/48 Linfeng_20120125_PCAF_6.raw Medium LWHPNHEELQQDK Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 305 2.30 0.00 0 10 100 3 558.60931 1673.81339 6.15 26.50 2192 2192 MS2 20/48 Linfeng_20120125_PCAF_6.raw High DILTSVVSR Unambiguous 1 1 IPI00060046.1 CID 1.0000 0.0000 1 1 318 2.02 0.00 0 48 100 2 495.28894 989.57060 8.06 39.06 4835 4835 MS2 12/16 Linfeng_20120125_PCAF_6.raw IPI00180922.9 Isoform 2 of Protein FAM48A 8.46 3 4 4 7 18.53 8.46 4 7 733 80.1 8.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VVNQYQELVQNEAK Unambiguous 3 1 IPI00180922.9 CID 1.0000 0.0000 1 1 395 3.43 0.00 0 20 100 2 831.43457 1661.86186 7.51 32.06 2841 2841 MS2 17/26 Linfeng_20120125_PCAF_3.raw High LYDLYIEEcEKEPEVK Unambiguous 3 1 IPI00180922.9 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.42 0.00 1 9 100 2 1029.00049 2056.99370 7.43 39.91 4560 4560 MS2 19/30 Linfeng_20120125_PCAF_3.raw High SPcNLAIPSEVDVEK Unambiguous 3 1 IPI00180922.9 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 333 2.66 0.00 0 8 100 2 829.41516 1657.82305 7.72 36.19 3747 3747 MS2 15/28 Linfeng_20120125_PCAF_3.raw Medium LYDLYIEEcEKEPEVK Unambiguous 3 1 IPI00180922.9 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 299 2.31 0.00 1 11 100 3 686.33643 2056.99472 7.92 39.81 4539 4539 MS2 22/60 Linfeng_20120125_PCAF_3.raw High SPcNLAIPSEVDVEK Unambiguous 3 1 IPI00180922.9 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 325 2.24 0.00 0 8 100 2 829.41455 1657.82182 6.98 36.26 4029 4029 MS2 16/28 Linfeng_20120125_PCAF_4.raw High ETDQTETVSVQSSVLGK Unambiguous 3 1 IPI00180922.9 CID 1.0000 0.0000 1 1 302 2.24 0.00 0 23 100 2 904.45660 1807.90593 7.68 29.34 2362 2362 MS2 14/32 Linfeng_20120125_PCAF_3.raw High ETDQTETVSVQSSVLGK Unambiguous 3 1 IPI00180922.9 CID 1.0000 0.0000 1 1 311 2.23 0.00 0 15 100 2 904.45667 1807.90605 7.74 29.42 2375 2375 MS2 13/32 Linfeng_20120125_PCAF_3.raw IPI00647217.2 Superkiller viralicidic activity 2-like 2 5.57 1 4 4 9 21.39 5.57 4 9 1042 117.7 6.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VEEINPEYMLEK Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 277 2.62 0.00 0 14 100 2 747.36847 1493.72966 6.94 42.09 4922 4922 MS2 15/22 Linfeng_20120125_PCAF_2.raw High VEEINPEYMLEK Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 275 2.54 0.00 0 23 100 2 747.36835 1493.72942 6.78 42.15 4932 4932 MS2 17/22 Linfeng_20120125_PCAF_2.raw High EAIQcVDNNQSVLVSAHTSAGK Unambiguous 1 1 IPI00647217.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 348 2.54 0.00 0 8 100 3 776.71777 2328.13877 5.94 28.14 2321 2321 MS2 25/84 Linfeng_20120125_PCAF_2.raw Medium EAIQcVDNNQSVLVSAHTSAGK Unambiguous 1 1 IPI00647217.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 2.47 0.00 0 16 100 3 776.71863 2328.14133 7.04 28.22 2338 2338 MS2 26/84 Linfeng_20120125_PCAF_2.raw High DVDFEGTDEPIFGK Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 153 2.34 0.00 0 24 100 2 784.86530 1568.72331 7.48 42.95 5107 5107 MS2 19/26 Linfeng_20120125_PCAF_2.raw High LTEQLAGPLR Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 214 2.30 0.00 0 34 100 2 549.32336 1097.63945 7.34 28.76 2429 2429 MS2 16/18 Linfeng_20120125_PCAF_2.raw High LTEQLAGPLR Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 209 2.26 0.00 0 24 100 2 549.32281 1097.63835 6.34 28.66 2411 2411 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LTEQLAGPLR Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 203 2.19 0.00 0 27 100 2 549.32263 1097.63799 6.01 28.56 2394 2394 MS2 17/18 Linfeng_20120125_PCAF_2.raw High LTEQLAGPLR Unambiguous 1 1 IPI00647217.2 CID 1.0000 0.0000 1 1 206 2.13 0.00 0 30 100 2 549.32306 1097.63884 6.79 28.86 2447 2447 MS2 16/18 Linfeng_20120125_PCAF_2.raw IPI00797796.1 92 kDa protein 5.83 3 3 3 5 14.88 5.83 3 5 823 91.7 7.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAEGEQILSGGVFNK Unambiguous 3 1 IPI00797796.1 CID 1.0000 0.0000 1 1 389 3.59 0.00 0 24 100 2 781.41583 1561.82439 1.45 43.43 5374 5374 MS2 23/28 Linfeng_20120125_PCAF_3.raw High NSPEAWcAAGNcFSLQR Unambiguous 3 1 IPI00797796.1 C7(Carbamidomethyl); C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 3.34 0.00 0 0 100 2 984.43610 1967.86492 8.20 40.58 4707 4707 MS2 18/32 Linfeng_20120125_PCAF_3.raw High LAEGEQILSGGVFNK Unambiguous 3 1 IPI00797796.1 CID 1.0000 0.0000 1 1 411 2.99 0.00 0 23 100 2 781.41675 1561.82622 2.62 43.32 5347 5347 MS2 20/28 Linfeng_20120125_PCAF_3.raw High GGITQPNINDSLEITK Unambiguous 3 1 IPI00797796.1 CID 1.0000 0.0000 1 1 335 2.51 0.00 0 2 100 2 850.45270 1699.89812 7.02 36.78 3878 3878 MS2 22/30 Linfeng_20120125_PCAF_3.raw High NSPEAWcAAGNcFSLQR Unambiguous 3 1 IPI00797796.1 C7(Carbamidomethyl); C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 2.45 0.00 0 13 100 2 984.43457 1967.86186 6.65 40.30 4647 4647 MS2 16/32 Linfeng_20120125_PCAF_3.raw IPI00878392.1 11 kDa protein 41.05 2 3 3 8 19.53 41.05 3 8 95 11.2 6.80 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YFQINQDEEEEEDED Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 2 3.66 0.00 0 8 100 2 966.37592 1931.74455 7.44 32.11 3281 3281 MS2 19/28 Linfeng_20120125_PCAF_10.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 404 2.42 0.00 0 6 100 2 621.84766 1242.68804 6.34 28.69 2610 2610 MS2 16/24 Linfeng_20120125_PCAF_10.raw High ITVTSEVPFSK Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 363 2.37 0.00 0 4 100 2 604.33594 1207.66460 6.35 34.59 3861 3861 MS2 17/20 Linfeng_20120125_PCAF_10.raw High YFQINQDEEEEEDED Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 3 2.37 0.00 0 12 100 2 966.37531 1931.74333 6.80 31.97 3246 3246 MS2 18/28 Linfeng_20120125_PCAF_10.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 419 2.28 0.00 0 30 100 2 621.84741 1242.68755 5.95 27.68 2417 2417 MS2 16/24 Linfeng_20120125_PCAF_10.raw High YFQINQDEEEEEDED Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 4 2.22 0.00 0 4 100 2 966.37427 1931.74126 5.73 31.87 3222 3222 MS2 20/28 Linfeng_20120125_PCAF_10.raw High ITVTSEVPFSK Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 336 2.18 0.00 0 4 100 2 604.33508 1207.66289 4.93 34.76 3901 3901 MS2 17/20 Linfeng_20120125_PCAF_10.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 403 2.04 0.00 0 31 100 2 621.84753 1242.68779 6.15 27.61 2400 2400 MS2 16/24 Linfeng_20120125_PCAF_10.raw IPI00941747.1 Calnexin 7.94 2 3 3 7 20.38 7.94 3 7 592 67.5 4.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPELNLDQFHDK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 304 3.90 0.00 0 31 100 3 486.24359 1456.71622 6.51 35.75 3909 3909 MS2 26/44 Linfeng_20120125_PCAF_4.raw High IPDPEAVKPDDWDEDAPAK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 189 3.18 0.00 0 0 100 2 1054.50244 2107.99761 7.41 34.94 3721 3721 MS2 21/36 Linfeng_20120125_PCAF_4.raw High TPELNLDQFHDK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 303 2.94 0.00 0 30 100 3 486.24359 1456.71622 6.51 35.89 3942 3942 MS2 26/44 Linfeng_20120125_PCAF_4.raw High IPDPEAVKPDDWDEDAPAK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 231 2.74 0.00 0 21 100 3 703.33716 2107.99692 7.09 34.64 3653 3653 MS2 25/72 Linfeng_20120125_PCAF_4.raw High TPELNLDQFHDK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 307 2.73 0.00 0 19 100 3 486.24380 1456.71686 6.95 36.07 3984 3984 MS2 26/44 Linfeng_20120125_PCAF_4.raw High TPELNLDQFHDK Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 273 2.48 0.00 0 17 100 2 728.86218 1456.71709 7.10 35.61 3877 3877 MS2 16/22 Linfeng_20120125_PCAF_4.raw High APVPTGEVYFADSFDR Unambiguous 2 1 IPI00941747.1 CID 1.0000 0.0000 1 1 211 2.41 0.00 0 29 100 2 885.92676 1770.84624 7.24 45.63 6225 6225 MS2 19/30 Linfeng_20120125_PCAF_4.raw IPI00022055.2 Histone acetyltransferase KAT2B 5.65 1 0 3 6 16.96 5.65 3 6 832 93.0 9.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KPPFEKPSIEQGVNNFVQYK Unambiguous 2 2 IPI00022055.2;IPI00788972.1 CID 1.0000 0.0000 1 1 316 3.39 0.00 0 14 100 3 783.75140 2349.23966 6.73 44.54 5649 5649 MS2 33/76 Linfeng_20120125_PCAF_3.raw High KPPFEKPSIEQGVNNFVQYK Unambiguous 2 2 IPI00022055.2;IPI00788972.1 CID 1.0000 0.0000 1 1 322 3.24 0.00 0 31 100 3 783.75073 2349.23764 5.87 44.81 5716 5716 MS2 35/76 Linfeng_20120125_PCAF_3.raw High KPPFEKPSIEQGVNNFVQYK Unambiguous 2 2 IPI00022055.2;IPI00788972.1 CID 1.0000 0.0000 1 1 335 3.22 0.00 0 13 100 3 783.74963 2349.23435 4.47 44.90 5737 5737 MS2 26/76 Linfeng_20120125_PCAF_3.raw High DYEGATLMGcELNPR Unambiguous 2 2 IPI00022055.2;IPI00788972.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 104 3.00 0.00 0 13 100 2 863.38824 1725.76921 6.98 39.22 4414 4414 MS2 22/28 Linfeng_20120125_PCAF_3.raw High INYWHLEAPSQR Unambiguous 2 2 IPI00022055.2;IPI00788972.1 CID 1.0000 0.0000 1 1 373 2.06 0.00 0 31 100 2 757.38641 1513.76555 7.18 39.28 4429 4429 MS2 18/22 Linfeng_20120125_PCAF_3.raw High INYWHLEAPSQR Unambiguous 2 2 IPI00022055.2;IPI00788972.1 CID 1.0000 0.0000 1 1 367 2.05 0.00 0 38 100 2 757.38672 1513.76616 7.58 39.75 4526 4526 MS2 17/22 Linfeng_20120125_PCAF_3.raw