Accession # AAs MW [kDa] calc. pI Description ?Coverage ?# PSMs ?# Peptides Score A2 Coverage A2 # PSM A2 # Peptides A2 Score B2 Coverage B2 # PSM B2 # Peptides B2 Score C2 Coverage C2 # PSM C2 # Peptides C2 IPI:IPI00007019.1 166 18.2 7.99 Peptidyl-prolyl cis-trans isomerase-like 1 10.24 2 2 14.30 0.00 36.51 10.24 1 1 37.09 8.43 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIKDFmIQGGDPTGTGR IPI:IPI00007019.1 1 1 CID M6(Oxidation) 29.65 4.54 1.00 1 3 607.97491 1821.91019 -3.44 29.02 3127 3127 MS2 27/64 Linfeng_091611_rIgG_9.raw High DFmIQGGDPTGTGR IPI:IPI00007019.1 1 1 CID M3(Oxidation) 92.37 4.45 1.00 1 2 734.32721 1467.64714 -4.23 28.96 3148 3148 MS2 18/26 Linfeng_091811_SIN3A_9.raw IPI:IPI00008433.4 204 22.9 9.72 40S ribosomal protein S5 7.35 1 1 19.55 0.00 16.60 7.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TIAEcLADELINAAK IPI:IPI00008433.4 1 1 CID C5(Carbamidomethyl) 88.65 5.92 1.00 1 3 544.61316 1631.82492 -3.71 48.49 5599 5599 MS2 33/56 Linfeng_091811_SIN3A_8.raw IPI:IPI00014474.1 692 76.1 5.15 A-kinase anchor protein 8 2.89 1 1 14.40 0.00 9.39 2.89 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ETPEEVAADVLAEVITAAVR IPI:IPI00014474.1 1 1 CID 62.72 5.25 1.00 1 3 695.03528 2083.09128 -0.28 56.04 6578 6578 MS2 28/76 Linfeng_091811_SIN3A_3.raw IPI:IPI00016930.1 280 32.8 7.90 Inhibitor of growth protein 2 38.21 23 7 4.01 0.00 211.39 38.21 23 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLTcYVQDYLEcVESLPHDMQR IPI:IPI00016930.1 1 1 CID "C4(Carbamidomethyl), C12(Carbamidomethyl)" 116.48 6.34 1.00 1 4 693.07245 2769.26797 -0.08 48.68 5779 5779 MS2 41/126 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 81.50 6.00 1.00 1 2 843.46741 1685.92754 1.18 51.55 5909 5909 MS2 23/26 Linfeng_091811_SIN3A_7.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 82.91 5.97 1.00 1 2 843.46661 1685.92595 0.24 51.45 6119 6119 MS2 23/26 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 79.09 5.91 1.00 1 3 562.64685 1685.92600 0.27 51.39 6112 6112 MS2 29/52 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 82.65 5.78 1.00 1 2 843.46497 1685.92266 -1.72 51.45 5913 5913 MS2 23/26 Linfeng_091811_SIN3A_10.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 63.02 5.75 1.00 1 3 562.64606 1685.92362 -1.15 51.39 5905 5905 MS2 27/52 Linfeng_091811_SIN3A_10.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 71.88 5.66 1.00 1 3 562.64520 1685.92105 -2.67 51.45 6320 6320 MS2 28/52 Linfeng_091811_SIN3A_5.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 59.41 5.60 1.00 1 3 562.64600 1685.92344 -1.26 51.57 5983 5983 MS2 27/52 Linfeng_091811_SIN3A_8.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 84.84 5.55 1.00 1 2 843.46692 1685.92656 0.60 51.67 5995 5995 MS2 21/26 Linfeng_091811_SIN3A_8.raw High QMELHSQcFQDPAESER IPI:IPI00016930.1 2 1 CID C8(Carbamidomethyl) 37.33 5.49 1.00 1 3 697.96411 2091.87778 -3.91 27.57 3057 3057 MS2 23/64 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 54.07 5.42 1.00 1 3 562.64648 1685.92490 -0.39 51.35 6087 6087 MS2 28/52 Linfeng_091811_SIN3A_2.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 69.00 5.34 1.00 1 3 562.64600 1685.92344 -1.26 51.48 5992 5992 MS2 29/52 Linfeng_091811_SIN3A_9.raw High QmELHSQcFQDPAESER IPI:IPI00016930.1 2 1 CID "M2(Oxidation), C8(Carbamidomethyl)" 45.34 5.10 1.00 1 3 703.29651 2107.87497 -2.80 24.63 2436 2436 MS2 24/64 Linfeng_091811_SIN3A_7.raw High IQIVTQmLELVENR IPI:IPI00016930.1 2 1 CID M7(Oxidation) 34.43 5.00 1.00 1 3 567.97552 1701.91202 -4.96 38.33 4472 4472 MS2 25/52 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 40.27 4.92 1.00 1 3 562.64697 1685.92636 0.48 51.47 5901 5901 MS2 25/52 Linfeng_091811_SIN3A_7.raw High DLcHmANGIEDcDDQPPK IPI:IPI00016930.1 2 1 CID "C3(Carbamidomethyl), M5(Oxidation), C12(Carbamidomethyl)" 65.51 4.83 1.00 1 3 710.95374 2130.84665 -2.80 25.88 2830 2830 MS2 28/68 Linfeng_091811_SIN3A_6.raw High QmELHSQcFQDPAESER IPI:IPI00016930.1 2 1 CID "M2(Oxidation), C8(Carbamidomethyl)" 77.20 4.68 1.00 1 3 703.29669 2107.87552 -2.54 24.49 2639 2639 MS2 26/64 Linfeng_091811_SIN3A_6.raw High IQIVTQMLELVENR IPI:IPI00016930.1 2 1 CID 71.79 4.51 1.00 1 3 562.64624 1685.92417 -0.82 51.34 6105 6105 MS2 26/52 Linfeng_091811_SIN3A_3.raw High YKKEDDLNQK IPI:IPI00016930.1 2 1 CID 14.37 4.51 1.00 1 3 427.55298 1280.64438 -2.94 2.80 287 287 MS2 22/36 Linfeng_091811_SIN3A_6.raw High QMELHSQcFQDPAESER IPI:IPI00016930.1 2 1 CID C8(Carbamidomethyl) 49.98 4.38 1.00 1 3 697.96381 2091.87687 -4.35 27.66 2848 2848 MS2 25/64 Linfeng_091811_SIN3A_7.raw High YQETLKEIDDVYEK IPI:IPI00016930.1 1 1 CID 69.12 4.28 1.00 1 3 591.62286 1772.85404 -2.77 30.89 3287 3287 MS2 25/52 Linfeng_091811_SIN3A_7.raw High ALINSQELGDEK IPI:IPI00016930.1 2 1 CID 63.46 4.13 1.00 1 2 658.83612 1316.66496 -3.29 28.23 3147 3147 MS2 18/22 Linfeng_091811_SIN3A_6.raw High ALINSQELGDEK IPI:IPI00016930.1 2 1 CID 67.95 4.08 1.00 1 2 658.83606 1316.66484 -3.39 28.23 2925 2925 MS2 18/22 Linfeng_091811_SIN3A_7.raw IPI:IPI00017342.1 191 21.3 8.12 Rho-related GTP-binding protein RhoG 9.95 1 1 32.22 0.00 37.72 9.95 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LKEQGQAPITPQQGQALAK IPI:IPI00017342.1 1 1 CID 36.00 4.36 1.00 1 3 669.37140 2006.09964 -1.68 24.16 2506 2506 MS2 22/72 Linfeng_091811_SIN3A_9.raw IPI:IPI00018017.1 246 28.4 4.74 Breast cancer metastasis-suppressor 1 24.80 28 6 10.31 0.00 287.06 24.80 28 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 86.08 6.91 1.00 1 3 564.30365 1690.89640 -2.78 42.39 4838 4838 MS2 34/52 Linfeng_091811_SIN3A_8.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 75.34 6.89 1.00 1 3 564.30383 1690.89695 -2.45 42.43 4897 4897 MS2 35/52 Linfeng_091811_SIN3A_9.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 81.13 6.27 1.00 1 3 564.30389 1690.89713 -2.34 42.42 4801 4801 MS2 35/52 Linfeng_091811_SIN3A_10.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 83.43 6.14 1.00 1 3 564.30353 1690.89603 -2.99 42.30 4762 4762 MS2 35/52 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 79.25 5.90 1.00 1 3 564.30359 1690.89621 -2.88 42.46 5002 5002 MS2 33/52 Linfeng_091811_SIN3A_6.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 73.15 5.83 1.00 1 3 564.30353 1690.89603 -2.99 43.40 4901 4901 MS2 30/52 Linfeng_091811_SIN3A_7.raw High RSEcVSEMLDLEK IPI:IPI00018017.1 3 1 CID C4(Carbamidomethyl) 31.48 5.69 1.00 1 3 532.58319 1595.73502 -3.41 32.18 3458 3458 MS2 26/48 Linfeng_091811_SIN3A_7.raw High RSEcVSEmLDLEK IPI:IPI00018017.1 3 1 CID "C4(Carbamidomethyl), M8(Oxidation)" 33.73 5.56 1.00 1 3 537.91315 1611.72489 -6.50 25.99 2628 2628 MS2 24/48 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 78.86 5.50 1.00 1 2 845.95099 1690.89470 -3.78 42.39 4774 4774 MS2 22/26 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 78.97 5.39 1.00 1 2 845.95135 1690.89543 -3.35 42.44 4845 4845 MS2 22/26 Linfeng_091811_SIN3A_8.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 44.33 5.36 1.00 1 3 564.30396 1690.89731 -2.24 44.55 5045 5045 MS2 29/52 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 88.41 5.23 1.00 1 2 845.94714 1690.88701 -8.33 57.60 6476 6476 MS2 20/26 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 80.91 5.19 1.00 1 2 845.95154 1690.89580 -3.13 42.42 4896 4896 MS2 22/26 Linfeng_091811_SIN3A_9.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 59.89 5.14 1.00 1 2 845.95465 1690.90203 0.55 56.33 6372 6372 MS2 21/26 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 99.28 4.94 1.00 1 2 845.95093 1690.89458 -3.85 59.63 6640 6640 MS2 21/26 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 83.07 4.81 1.00 1 2 845.95435 1690.90141 0.19 57.35 6455 6455 MS2 20/26 Linfeng_091811_SIN3A_7.raw High RSEcVSEMLDLEK IPI:IPI00018017.1 3 1 CID C4(Carbamidomethyl) 78.30 4.73 1.00 1 2 798.37225 1595.73723 -2.02 32.21 3462 3462 MS2 20/24 Linfeng_091811_SIN3A_7.raw High LLLYDTLQGELQER IPI:IPI00018017.1 2 1 CID 77.83 4.70 1.00 1 2 845.95270 1690.89812 -1.76 58.62 6558 6558 MS2 21/26 Linfeng_091811_SIN3A_7.raw High NKYEcELQGAK IPI:IPI00018017.1 3 1 CID C5(Carbamidomethyl) 51.41 4.39 1.00 1 3 447.21353 1339.62604 -3.80 20.48 1938 1938 MS2 22/40 Linfeng_091811_SIN3A_8.raw High NKYEcELQGAK IPI:IPI00018017.1 3 1 CID C5(Carbamidomethyl) 52.71 4.36 1.00 1 3 447.21368 1339.62650 -3.45 20.39 1846 1846 MS2 23/40 Linfeng_091811_SIN3A_7.raw High SEcVSEmLDLEK IPI:IPI00018017.1 3 1 CID "C3(Carbamidomethyl), M7(Oxidation)" 60.48 4.34 1.00 1 2 728.31842 1455.62956 -3.22 29.07 3039 3039 MS2 19/22 Linfeng_091811_SIN3A_7.raw High SEcVSEMLDLEK IPI:IPI00018017.1 3 1 CID C3(Carbamidomethyl) 66.43 4.30 1.00 1 2 720.32068 1439.63408 -3.65 35.58 3895 3895 MS2 19/22 Linfeng_091811_SIN3A_7.raw High APEYTEPLGGLQR IPI:IPI00018017.1 3 1 CID 110.91 4.18 1.00 1 2 715.86517 1430.72307 -3.08 31.44 3360 3360 MS2 19/24 Linfeng_091811_SIN3A_7.raw High APEYTEPLGGLQR IPI:IPI00018017.1 3 1 CID 62.20 4.14 1.00 1 2 715.86548 1430.72368 -2.66 31.58 3588 3588 MS2 17/24 Linfeng_091811_SIN3A_3.raw High SEcVSEmLDLEK IPI:IPI00018017.1 3 1 CID "C3(Carbamidomethyl), M7(Oxidation)" 68.12 4.13 1.00 1 2 728.31793 1455.62859 -3.89 29.25 3131 3131 MS2 19/22 Linfeng_091811_SIN3A_8.raw High APEYTEPLGGLQR IPI:IPI00018017.1 3 1 CID 100.85 4.12 1.00 1 2 715.86493 1430.72258 -3.42 31.70 3460 3460 MS2 19/24 Linfeng_091811_SIN3A_8.raw High LRLEEVGAER IPI:IPI00018017.1 3 1 CID 46.19 4.11 1.00 1 2 586.32269 1171.63811 -4.20 24.81 2461 2461 MS2 16/18 Linfeng_091811_SIN3A_7.raw High APEYTEPLGGLQR IPI:IPI00018017.1 3 1 CID 36.19 4.10 1.00 1 2 715.86469 1430.72209 -3.77 31.50 3565 3565 MS2 17/24 Linfeng_091811_SIN3A_1.raw IPI:IPI00022019.1 220 23.3 9.17 Histone deacetylase complex subunit SAP30 26.36 7 5 3.64 0.00 127.70 26.36 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR IPI:IPI00022019.1 1 1 CID 147.24 8.01 1.00 1 3 1130.53540 3389.59165 -1.90 43.04 4856 4856 MS2 41/120 Linfeng_091811_SIN3A_7.raw High GSDDDGGDSPVQDIDTPEVDLYQLQVNTLR IPI:IPI00022019.1 1 1 CID 106.43 6.02 1.00 1 3 1087.83826 3261.50022 -0.89 45.73 5192 5192 MS2 34/116 Linfeng_091811_SIN3A_7.raw High KGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR IPI:IPI00022019.1 1 1 CID 94.23 5.77 1.00 1 4 848.15173 3389.58510 -3.83 43.05 4858 4858 MS2 38/180 Linfeng_091811_SIN3A_7.raw High GSDDDGGDSPVQDIDTPEVDLYQLQVNTLR IPI:IPI00022019.1 1 1 CID 85.17 5.07 1.00 1 4 816.12970 3261.49697 -1.88 45.80 5201 5201 MS2 34/174 Linfeng_091811_SIN3A_7.raw High SIPVNEKDTLTYFIYSVK IPI:IPI00022019.1 1 1 CID 96.00 5.01 1.00 1 2 1059.05945 2117.11162 -2.33 42.66 4808 4808 MS2 21/34 Linfeng_091811_SIN3A_7.raw High HLYIcDYHK IPI:IPI00022019.1 1 1 CID C5(Carbamidomethyl) 67.91 4.36 1.00 1 3 416.86411 1248.57776 -4.21 23.03 2293 2293 MS2 18/32 Linfeng_091811_SIN3A_8.raw High DTLTYFIYSVK IPI:IPI00022019.1 1 1 CID 51.79 4.10 1.00 1 2 675.35236 1349.69744 -0.99 46.54 5294 5294 MS2 16/20 Linfeng_091811_SIN3A_7.raw IPI:IPI00031517.1 821 92.8 5.41 DNA replication licensing factor MCM6 1.58 1 1 10.66 0.00 25.42 1.58 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VSGVDGYETEGIR IPI:IPI00031517.1 1 1 CID 95.71 4.23 1.00 1 2 691.33173 1381.65618 -2.38 27.35 3017 3017 MS2 18/24 Linfeng_091811_SIN3A_3.raw IPI:IPI00031653.8 433 49.2 5.81 Breast cancer metastasis-suppressor 1-like protein 11.09 11 4 8.50 0.00 187.02 11.09 11 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HSIDITSELWNDELQSR IPI:IPI00031653.8 1 1 CID 82.09 6.99 1.00 1 3 681.66119 2042.96903 -4.32 38.73 4304 4304 MS2 28/64 Linfeng_091811_SIN3A_7.raw High APEYLEPLATLQENMQIR IPI:IPI00031653.8 1 1 CID 109.70 6.51 1.00 1 2 1058.53870 2116.07012 -2.03 46.40 5495 5495 MS2 25/34 Linfeng_091811_SIN3A_6.raw High HSIDITSELWNDELQSR IPI:IPI00031653.8 1 1 CID 62.11 6.28 1.00 1 3 681.66089 2042.96811 -4.77 38.70 4519 4519 MS2 26/64 Linfeng_091811_SIN3A_6.raw High APEYLEPLATLQENMQIR IPI:IPI00031653.8 1 1 CID 74.54 5.90 1.00 1 2 1058.53857 2116.06987 -2.15 46.50 5289 5289 MS2 19/34 Linfeng_091811_SIN3A_7.raw High APEYLEPLATLQENmQIR IPI:IPI00031653.8 1 1 CID M15(Oxidation) 79.25 5.64 1.00 1 2 1066.53516 2132.06304 -2.95 41.16 4836 4836 MS2 20/34 Linfeng_091811_SIN3A_6.raw High APEYLEPLATLQENMQIR IPI:IPI00031653.8 1 1 CID 40.39 5.56 1.00 1 3 706.02863 2116.07132 -1.46 46.34 5487 5487 MS2 28/68 Linfeng_091811_SIN3A_6.raw High APEYLEPLATLQENMQIR IPI:IPI00031653.8 1 1 CID 41.61 5.56 1.00 1 3 706.02869 2116.07151 -1.37 46.41 5277 5277 MS2 28/68 Linfeng_091811_SIN3A_7.raw High APEYLEPLATLQENmQIR IPI:IPI00031653.8 1 1 CID M15(Oxidation) 55.29 5.55 1.00 1 3 711.35962 2132.06430 -2.36 41.15 4615 4615 MS2 30/68 Linfeng_091811_SIN3A_7.raw High APEYLEPLATLQENmQIR IPI:IPI00031653.8 1 1 CID M15(Oxidation) 74.20 5.44 1.00 1 3 711.35919 2132.06302 -2.96 41.02 4818 4818 MS2 30/68 Linfeng_091811_SIN3A_6.raw High RmEcLDEMSNLEK IPI:IPI00031653.8 1 1 CID "M2(Oxidation), C4(Carbamidomethyl)" 65.94 4.74 1.00 1 3 557.57391 1670.70719 -6.68 27.41 3036 3036 MS2 25/48 Linfeng_091811_SIN3A_6.raw High mEcLDEMSNLEK IPI:IPI00031653.8 1 1 CID "M1(Oxidation), C3(Carbamidomethyl)" 80.06 4.10 1.00 1 2 757.81000 1514.61272 -2.98 30.23 3420 3420 MS2 20/22 Linfeng_091811_SIN3A_6.raw IPI:IPI00032513.3 416 47.2 4.88 "Keratin, type I cuticular Ha1" 12.74 18 3 110.20 0.00 442.02 12.74 18 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QVVSSSEQLQSYQAEIIELR IPI:IPI00032513.3 7 1 CID 122.41 7.30 1.00 1 2 1154.09326 2307.17925 -1.52 39.80 4682 4682 MS2 24/38 Linfeng_091611_rIgG_6.raw High SDLEAQVESLKEELLcLK IPI:IPI00032513.3;IPI:IPI00917866.1 6 2 CID C16(Carbamidomethyl) 109.69 6.28 1.00 1 2 1052.54431 2104.08135 -1.41 46.19 5495 5495 MS2 22/34 Linfeng_091611_rIgG_6.raw High SDLEAQVESLKEELLcLK IPI:IPI00032513.3;IPI:IPI00917866.1 6 2 CID C16(Carbamidomethyl) 142.39 6.04 1.00 1 2 1052.54346 2104.07964 -2.22 46.19 4932 4932 MS2 22/34 Linfeng_091611_rIgG_3.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 77.70 5.15 1.00 1 2 813.42651 1625.84575 -2.25 33.79 3900 3900 MS2 19/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 83.78 5.12 1.00 1 2 813.42657 1625.84587 -2.18 33.57 3329 3329 MS2 20/28 Linfeng_091611_rIgG_3.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 79.24 5.04 1.00 1 2 813.42590 1625.84453 -3.00 33.75 3749 3749 MS2 19/28 Linfeng_091611_rIgG_2.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 73.58 4.85 1.00 1 2 813.42572 1625.84416 -3.23 33.69 4025 4025 MS2 19/28 Linfeng_091611_rIgG_8.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 76.80 4.82 1.00 1 2 813.42639 1625.84551 -2.40 33.72 3823 3823 MS2 20/28 Linfeng_091611_rIgG_7.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 72.31 4.72 1.00 1 2 813.42572 1625.84416 -3.23 35.04 4062 4062 MS2 20/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 82.21 4.64 1.00 1 2 813.42474 1625.84221 -4.43 36.04 4193 4193 MS2 19/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 75.31 4.52 1.00 1 2 813.42566 1625.84404 -3.30 33.62 3935 3935 MS2 20/28 Linfeng_091611_rIgG_4.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 69.64 4.50 1.00 1 2 813.42743 1625.84758 -1.13 58.16 6812 6812 MS2 16/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 81.62 4.49 1.00 1 2 813.42584 1625.84441 -3.08 33.71 3907 3907 MS2 20/28 Linfeng_091611_rIgG_5.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 70.60 4.39 1.00 1 2 813.42780 1625.84831 -0.67 53.66 6402 6402 MS2 14/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 83.27 4.33 1.00 1 2 813.42542 1625.84355 -3.60 33.66 3733 3733 MS2 20/28 Linfeng_091611_rIgG_1.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 59.46 4.24 1.00 1 2 813.42645 1625.84563 -2.33 59.21 6903 6903 MS2 16/28 Linfeng_091611_rIgG_6.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 58.19 4.22 1.00 1 2 813.42645 1625.84563 -2.33 35.02 3509 3509 MS2 16/28 Linfeng_091611_rIgG_3.raw High LNVEVDAAPTVDLNR IPI:IPI00032513.3 2 1 CID 60.08 4.08 1.00 1 2 813.42963 1625.85198 1.58 57.08 6721 6721 MS2 17/28 Linfeng_091611_rIgG_6.raw IPI:IPI00032541.1 507 55.8 6.55 "Keratin, type II cuticular Hb5" 17.36 33 5 76.14 0.00 1270.53 17.36 33 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 123.67 7.29 1.00 1 3 1308.64331 3923.91538 -0.91 46.98 5607 5607 MS2 34/144 Linfeng_091611_rIgG_5.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 93.35 6.63 1.00 1 3 1308.63965 3923.90439 -3.71 46.88 5018 5018 MS2 26/144 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 115.46 6.48 1.00 1 4 981.73035 3923.89956 -4.94 46.85 5015 5015 MS2 38/216 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 128.81 6.41 1.00 1 4 981.73291 3923.90981 -2.32 46.90 5641 5641 MS2 38/216 Linfeng_091611_rIgG_4.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 300.00 6.33 1.00 1 4 981.73303 3923.91030 -2.20 46.97 5606 5606 MS2 38/216 Linfeng_091611_rIgG_5.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 69.39 6.19 1.00 1 3 1308.64148 3923.90989 -2.31 46.92 5644 5644 MS2 31/144 Linfeng_091611_rIgG_4.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 128.14 5.72 1.00 1 2 855.39893 1709.79057 -2.36 29.28 3303 3303 MS2 25/30 Linfeng_091611_rIgG_6.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 112.78 5.40 1.00 1 2 855.39850 1709.78972 -2.86 28.97 3121 3121 MS2 24/30 Linfeng_091611_rIgG_1.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 120.85 5.38 1.00 1 2 855.39917 1709.79106 -2.07 29.05 3137 3137 MS2 24/30 Linfeng_091611_rIgG_2.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 68.25 5.25 1.00 1 2 855.40088 1709.79448 -0.07 30.31 2918 2918 MS2 17/30 Linfeng_091611_rIgG_3.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 99.56 5.23 1.00 1 2 855.39935 1709.79143 -1.86 29.11 3218 3218 MS2 25/30 Linfeng_091611_rIgG_7.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 50.71 5.21 1.00 1 3 570.60107 1709.78867 -3.47 29.11 3340 3340 MS2 27/60 Linfeng_091611_rIgG_4.raw High VLQAHISDTSVIVK IPI:IPI00032541.1 2 1 CID 98.36 4.84 1.00 1 2 755.43317 1509.85906 -3.00 28.54 3225 3225 MS2 21/26 Linfeng_091611_rIgG_5.raw High VLQAHISDTSVIVK IPI:IPI00032541.1 2 1 CID 77.80 4.81 1.00 1 2 755.43317 1509.85906 -3.00 28.55 3070 3070 MS2 21/26 Linfeng_091611_rIgG_2.raw High VLQAHISDTSVIVK IPI:IPI00032541.1 2 1 CID 93.87 4.81 1.00 1 2 755.43274 1509.85820 -3.56 28.49 3254 3254 MS2 22/26 Linfeng_091611_rIgG_4.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 63.34 4.79 1.00 1 3 570.60138 1709.78958 -2.94 29.24 3318 3318 MS2 28/60 Linfeng_091611_rIgG_5.raw High AKQDMAcLLK IPI:IPI00032541.1 3 1 CID C7(Carbamidomethyl) 25.40 4.72 1.00 1 3 393.20560 1177.60224 -3.91 25.47 2846 2846 MS2 25/36 Linfeng_091611_rIgG_4.raw High VLQAHISDTSVIVK IPI:IPI00032541.1 2 1 CID 85.91 4.71 1.00 1 2 755.43329 1509.85930 -2.84 28.70 3225 3225 MS2 21/26 Linfeng_091611_rIgG_6.raw High VLQAHISDTSVIVK IPI:IPI00032541.1 2 1 CID 97.63 4.69 1.00 1 2 755.43323 1509.85918 -2.92 28.46 2678 2678 MS2 22/26 Linfeng_091611_rIgG_3.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 64.25 4.63 1.00 1 2 855.39801 1709.78874 -3.43 28.88 3270 3270 MS2 17/30 Linfeng_091611_rIgG_5.raw High AKQDMAcLLK IPI:IPI00032541.1 3 1 CID C7(Carbamidomethyl) 28.02 4.60 1.00 1 3 393.20560 1177.60224 -3.91 25.46 2662 2662 MS2 25/36 Linfeng_091611_rIgG_1.raw High AKQDMAcLLK IPI:IPI00032541.1 3 1 CID C7(Carbamidomethyl) 21.41 4.60 1.00 1 3 393.20596 1177.60334 -2.98 25.63 2837 2837 MS2 25/36 Linfeng_091611_rIgG_5.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 56.44 4.58 1.00 1 2 855.39935 1709.79143 -1.86 29.15 2932 2932 MS2 17/30 Linfeng_091611_rIgG_10.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 51.69 4.20 1.00 1 2 632.34930 1263.69133 -2.41 39.60 4094 4094 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 52.27 4.19 1.00 1 2 632.34900 1263.69072 -2.90 39.63 4717 4717 MS2 17/20 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 69.77 4.18 1.00 1 2 632.34918 1263.69109 -2.61 40.13 4725 4725 MS2 17/20 Linfeng_091611_rIgG_6.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.54 4.16 1.00 1 2 632.34900 1263.69072 -2.90 39.91 4540 4540 MS2 17/20 Linfeng_091611_rIgG_2.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 60.07 4.15 1.00 1 2 855.39850 1709.78972 -2.86 28.67 3279 3279 MS2 16/30 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.75 4.13 1.00 1 2 632.34851 1263.68974 -3.67 40.65 4228 4228 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.95 4.11 1.00 1 2 632.34729 1263.68730 -5.60 39.89 4555 4555 MS2 17/20 Linfeng_091611_rIgG_1.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.57 4.11 1.00 1 2 632.35034 1263.69341 -0.77 57.58 6839 6839 MS2 17/20 Linfeng_091611_rIgG_5.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.39 4.11 1.00 1 2 632.34882 1263.69036 -3.19 42.78 4500 4500 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.31 4.09 1.00 1 2 632.35034 1263.69341 -0.77 52.52 6295 6295 MS2 15/20 Linfeng_091611_rIgG_5.raw IPI:IPI00032849.2 178 21.2 9.94 Nucleolar protein 16 8.43 1 1 7.01 0.00 8.65 8.43 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FYPAEWQDFLDSLQK IPI:IPI00032849.2 1 1 CID 51.47 4.51 1.00 1 3 629.63513 1886.89084 -2.74 50.37 5835 5835 MS2 29/56 Linfeng_091811_SIN3A_8.raw IPI:IPI00073602.1 272 28.2 6.28 Exosome complex exonuclease MTR3 5.88 1 1 14.35 0.00 11.65 5.88 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GGGPAGAGGEAPAALR IPI:IPI00073602.1 1 1 CID 50.40 4.42 1.00 1 2 654.83380 1308.66033 -4.02 23.81 2323 2323 MS2 19/30 Linfeng_091811_SIN3A_7.raw IPI:IPI00082310.1 404 44.0 7.28 "Isoform 3 of KH domain-containing, RNA-binding, signal transduction-associated protein 1" 3.47 1 1 14.27 0.00 79.51 3.47 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KDDEENYLDLFSHK IPI:IPI00082310.1 4 1 CID 26.00 4.97 1.00 1 3 584.93884 1752.80198 -3.20 35.30 4151 4151 MS2 21/52 Linfeng_091611_rIgG_4.raw IPI:IPI00106847.3 1068 120.5 7.93 Isoform GTBP-alt of DNA mismatch repair protein Msh6 1.12 1 1 37.18 0.00 34.15 1.12 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIDFLSALEGFK IPI:IPI00106847.3 2 1 CID 56.24 4.14 1.00 1 2 676.87610 1352.74492 -0.87 52.35 6097 6097 MS2 18/22 Linfeng_091611_rIgG_2.raw IPI:IPI00145593.7 860 96.2 8.10 Nucleolar MIF4G domain-containing protein 1 1.63 2 1 52.48 0.00 101.06 1.63 1 1 62.57 1.63 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DGLDYILGALESGK IPI:IPI00145593.7 1 1 CID 62.55 5.15 1.00 1 2 725.87378 1450.74028 -1.51 51.08 5534 5534 MS2 18/26 Linfeng_091611_rIgG_3.raw High DGLDYILGALESGK 1 0 CID 58.10 5.06 1.00 1 2 725.87500 1450.74272 0.17 51.29 6099 6099 MS2 20/26 Linfeng_091811_SIN3A_3.raw IPI:IPI00150057.6 1130 124.8 5.55 Isoform 2 of SWI/SNF complex subunit SMARCC2 1.86 2 1 29.25 0.00 15.01 1.86 1 1 18.25 1.86 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIGEGNLSTAAAAALAAAAVK 2 0 CID 42.52 5.46 1.00 1 3 629.00525 1885.00119 -0.77 45.13 5201 5201 MS2 32/80 Linfeng_091611_rIgG_2.raw High DIGEGNLSTAAAAALAAAAVK IPI:IPI00150057.6 2 1 CID 8.15 4.44 1.00 1 3 629.00403 1884.99753 -2.72 45.38 5335 5335 MS2 30/80 Linfeng_091811_SIN3A_2.raw IPI:IPI00154528.3 1091 126.2 6.99 Isoform 1 of Structural maintenance of chromosomes protein 6 1.56 1 1 41.56 0.00 16.19 1.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FGPNVPALLEAIDDAYR IPI:IPI00154528.3 2 1 CID 68.68 4.97 1.00 1 3 620.98682 1860.94590 -1.74 52.32 5687 5687 MS2 29/64 Linfeng_091611_rIgG_3.raw IPI:IPI00167941.1 5596 632.4 5.68 Midasin 0.68 2 2 66.97 0.00 82.71 0.68 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVEGLDQFTGEVISSVSELQSLK IPI:IPI00167941.1 1 1 CID 128.12 7.32 1.00 1 3 826.77289 2478.30411 2.67 54.43 6379 6379 MS2 35/88 Linfeng_091611_rIgG_1.raw High LLSVLAQVFTELAQK IPI:IPI00167941.1 1 1 CID 33.75 5.22 1.00 1 3 553.99500 1659.97043 1.43 54.62 6403 6403 MS2 28/56 Linfeng_091611_rIgG_1.raw IPI:IPI00170596.1 1273 145.1 7.25 Paired amphipathic helix protein Sin3a 44.54 200 40 27.80 0.00 2201.74 44.54 200 40 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 110.51 8.18 1.00 1 3 715.02087 2143.04807 -2.27 47.59 5614 5614 MS2 32/68 Linfeng_091811_SIN3A_2.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 300.00 7.90 1.00 1 4 1025.74805 4099.97036 -0.87 42.37 4988 4988 MS2 40/216 Linfeng_091811_SIN3A_3.raw High WLmGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C13(Carbamidomethyl), C17(Carbamidomethyl)" 144.11 7.68 1.00 1 3 1108.85583 3324.55295 -1.72 43.59 5144 5144 MS2 28/112 Linfeng_091811_SIN3A_3.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 80.94 7.63 1.00 1 3 756.36694 2267.08628 -3.39 36.96 4253 4253 MS2 31/80 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 100.34 7.59 1.00 1 3 715.02130 2143.04935 -1.68 47.68 5657 5657 MS2 35/68 Linfeng_091811_SIN3A_3.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 110.51 7.54 1.00 1 3 715.02063 2143.04734 -2.62 47.81 5685 5685 MS2 33/68 Linfeng_091811_SIN3A_4.raw High WLmGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C13(Carbamidomethyl), C17(Carbamidomethyl)" 110.13 7.53 1.00 1 3 1108.85535 3324.55149 -2.16 43.61 5112 5112 MS2 28/112 Linfeng_091811_SIN3A_2.raw High WLmGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C13(Carbamidomethyl), C17(Carbamidomethyl)" 133.73 7.47 1.00 1 3 1108.85547 3324.55185 -2.05 43.95 5033 5033 MS2 28/112 Linfeng_091811_SIN3A_8.raw High WLMGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "C13(Carbamidomethyl), C17(Carbamidomethyl)" 300.00 7.39 1.00 1 3 1103.52734 3308.56748 1.13 46.47 5507 5507 MS2 28/112 Linfeng_091811_SIN3A_3.raw High WLMGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "C13(Carbamidomethyl), C17(Carbamidomethyl)" 300.00 7.38 1.00 1 3 1103.52490 3308.56015 -1.09 46.30 5452 5452 MS2 31/112 Linfeng_091811_SIN3A_2.raw High LFKNQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 137.99 7.33 1.00 1 3 1013.86322 3039.57511 2.51 50.34 5960 5960 MS2 36/104 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 120.90 7.30 1.00 1 3 715.02008 2143.04569 -3.38 47.81 5855 5855 MS2 34/68 Linfeng_091811_SIN3A_5.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 98.08 7.16 1.00 1 3 720.35175 2159.04068 -3.32 46.04 5418 5418 MS2 32/68 Linfeng_091811_SIN3A_2.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 109.92 7.16 1.00 1 3 1367.32642 4099.96469 -2.25 42.51 4971 4971 MS2 26/144 Linfeng_091811_SIN3A_2.raw High WLmGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C13(Carbamidomethyl), C17(Carbamidomethyl)" 127.14 7.10 1.00 1 3 1108.85620 3324.55405 -1.39 43.73 5184 5184 MS2 28/112 Linfeng_091811_SIN3A_4.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 147.50 7.07 1.00 1 4 1025.74683 4099.96547 -2.06 42.54 5030 5030 MS2 39/216 Linfeng_091811_SIN3A_4.raw High SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK IPI:IPI00170596.1 1 1 CID 156.54 7.07 1.00 1 3 1337.01709 4009.03672 -5.00 37.01 4259 4259 MS2 26/144 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 116.27 7.04 1.00 1 3 720.35199 2159.04142 -2.98 42.71 5206 5206 MS2 32/68 Linfeng_091811_SIN3A_5.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 99.77 7.00 1.00 1 3 720.35260 2159.04325 -2.13 42.65 5045 5045 MS2 33/68 Linfeng_091811_SIN3A_4.raw High VSKPSQLQAHTPASQQTPPLPPYASPR IPI:IPI00170596.1 1 1 CID 94.22 6.95 1.00 1 3 961.83813 2883.49985 -3.96 27.93 3047 3047 MS2 27/104 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 84.23 6.90 1.00 1 3 715.02209 2143.05173 -0.56 47.75 5661 5661 MS2 33/68 Linfeng_091811_SIN3A_1.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 300.00 6.88 1.00 1 5 820.79944 4099.96809 -1.42 42.48 4967 4967 MS2 52/288 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 90.21 6.87 1.00 1 3 720.35315 2159.04489 -1.37 45.00 5287 5287 MS2 32/68 Linfeng_091811_SIN3A_2.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 118.76 6.78 1.00 1 4 1025.74646 4099.96401 -2.42 42.40 4957 4957 MS2 35/216 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 98.22 6.75 1.00 1 3 720.35309 2159.04471 -1.46 42.46 5000 5000 MS2 35/68 Linfeng_091811_SIN3A_3.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 112.59 6.62 1.00 1 3 883.07782 2647.21891 -0.40 46.68 5533 5533 MS2 31/88 Linfeng_091811_SIN3A_3.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 72.27 6.55 1.00 1 3 883.07587 2647.21305 -2.61 47.50 5602 5602 MS2 30/88 Linfeng_091811_SIN3A_2.raw High FRLDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 57.44 6.54 1.00 1 3 605.65363 1814.94632 -2.49 30.93 3503 3503 MS2 29/60 Linfeng_091811_SIN3A_3.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 57.00 6.53 1.00 1 4 663.58594 2651.32192 0.72 52.29 6215 6215 MS2 36/138 Linfeng_091811_SIN3A_3.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 112.91 6.53 1.00 1 2 1080.02466 2159.04204 -2.69 42.46 4965 4965 MS2 25/34 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 115.35 6.52 1.00 1 2 956.44666 1911.88603 -3.70 37.11 4302 4302 MS2 22/32 Linfeng_091811_SIN3A_1.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 30.11 6.48 1.00 1 4 663.58521 2651.31899 -0.39 52.16 6187 6187 MS2 36/138 Linfeng_091811_SIN3A_2.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 74.83 6.44 1.00 1 3 756.36725 2267.08719 -2.98 37.03 4292 4292 MS2 31/80 Linfeng_091811_SIN3A_1.raw High FRLDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 52.44 6.41 1.00 1 3 605.65344 1814.94577 -2.80 31.15 3560 3560 MS2 26/60 Linfeng_091811_SIN3A_4.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 111.34 6.40 1.00 1 2 956.44708 1911.88689 -3.25 37.10 4309 4309 MS2 22/32 Linfeng_091811_SIN3A_3.raw High GDLSDVEEEEEEEmDVDEATGAVK IPI:IPI00170596.1 1 1 CID M14(Oxidation) 120.29 6.38 1.00 1 3 881.03021 2641.07608 -2.64 35.15 4013 4013 MS2 36/92 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 111.30 6.38 1.00 1 3 720.35248 2159.04288 -2.30 42.67 5022 5022 MS2 31/68 Linfeng_091811_SIN3A_1.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 128.95 6.35 1.00 1 2 1080.02539 2159.04350 -2.02 42.54 5009 5009 MS2 23/34 Linfeng_091811_SIN3A_3.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 114.56 6.32 1.00 1 2 1072.02771 2143.04814 -2.24 47.72 5631 5631 MS2 23/34 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 90.44 6.32 1.00 1 3 637.96735 1911.88749 -2.94 37.10 4310 4310 MS2 36/64 Linfeng_091811_SIN3A_3.raw High LQFGSQPQVYNDFLDIMK IPI:IPI00170596.1 1 1 CID 57.60 6.31 1.00 1 3 715.02246 2143.05283 -0.05 47.92 5683 5683 MS2 32/68 Linfeng_091811_SIN3A_6.raw High GDLSDVEEEEEEEMDVDEATGAVK IPI:IPI00170596.1 1 1 CID 157.61 6.30 1.00 1 3 875.69592 2625.07322 -5.68 37.54 4329 4329 MS2 36/92 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 113.71 6.28 1.00 1 2 956.44550 1911.88371 -4.91 37.61 4338 4338 MS2 21/32 Linfeng_091811_SIN3A_2.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 130.84 6.25 1.00 1 2 1326.16553 2651.32378 1.42 52.22 6194 6194 MS2 24/46 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 117.28 6.25 1.00 1 2 956.44678 1911.88628 -3.57 37.30 4338 4338 MS2 22/32 Linfeng_091811_SIN3A_6.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 82.91 6.18 1.00 1 3 756.36786 2267.08902 -2.17 37.01 4298 4298 MS2 32/80 Linfeng_091811_SIN3A_3.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 125.07 6.17 1.00 1 3 637.96698 1911.88639 -3.52 37.12 4274 4274 MS2 32/64 Linfeng_091811_SIN3A_2.raw High LKEPMDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID M19(Oxidation) 91.97 6.17 1.00 1 3 854.40100 2561.18845 -2.15 44.30 5199 5199 MS2 30/80 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 125.99 6.11 1.00 1 2 956.44708 1911.88689 -3.25 36.48 4190 4190 MS2 23/32 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 92.63 6.10 1.00 1 3 637.96704 1911.88657 -3.42 35.48 4057 4057 MS2 35/64 Linfeng_091811_SIN3A_2.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 118.94 6.09 1.00 1 2 1134.04675 2267.08623 -3.41 37.00 4258 4258 MS2 23/40 Linfeng_091811_SIN3A_2.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 72.10 6.06 1.00 1 3 592.62555 1775.86209 -2.86 24.35 2531 2531 MS2 28/56 Linfeng_091811_SIN3A_9.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 65.34 6.01 1.00 1 3 592.62549 1775.86191 -2.96 24.21 2576 2576 MS2 30/56 Linfeng_091811_SIN3A_3.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 112.53 6.00 1.00 1 2 1134.04663 2267.08599 -3.51 37.08 4307 4307 MS2 22/40 Linfeng_091811_SIN3A_3.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 106.56 5.99 1.00 1 2 956.44690 1911.88652 -3.45 37.28 4352 4352 MS2 22/32 Linfeng_091811_SIN3A_4.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 125.34 5.98 1.00 1 2 956.44653 1911.88579 -3.83 37.21 4476 4476 MS2 22/32 Linfeng_091811_SIN3A_5.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 73.78 5.97 1.00 1 3 592.62506 1775.86063 -3.68 24.41 2628 2628 MS2 28/56 Linfeng_091811_SIN3A_6.raw High LKEPmDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID M5(Oxidation) 80.28 5.96 1.00 1 3 854.40088 2561.18808 -2.30 45.54 5389 5389 MS2 27/80 Linfeng_091811_SIN3A_3.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 92.61 5.95 1.00 1 3 884.44440 2651.31864 -0.52 52.31 6153 6153 MS2 35/92 Linfeng_091811_SIN3A_4.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 58.89 5.93 1.00 1 3 720.35229 2159.04233 -2.56 43.86 5144 5144 MS2 30/68 Linfeng_091811_SIN3A_2.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 91.43 5.91 1.00 1 2 1324.11255 2647.21782 -0.81 46.70 5536 5536 MS2 17/44 Linfeng_091811_SIN3A_3.raw High FRLDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 61.90 5.90 1.00 1 3 605.65240 1814.94266 -4.51 30.98 3463 3463 MS2 27/60 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 133.48 5.88 1.00 1 3 637.96704 1911.88657 -3.42 37.33 4342 4342 MS2 33/64 Linfeng_091811_SIN3A_6.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 108.57 5.84 1.00 1 2 810.94366 1620.88005 -2.67 40.47 4708 4708 MS2 22/26 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID M5(Oxidation) 70.57 5.83 1.00 1 3 854.40076 2561.18772 -2.44 45.51 5352 5352 MS2 29/80 Linfeng_091811_SIN3A_2.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 97.33 5.83 1.00 1 3 637.96704 1911.88657 -3.42 37.13 4304 4304 MS2 32/64 Linfeng_091811_SIN3A_1.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 57.76 5.79 1.00 1 3 592.62494 1775.86026 -3.89 24.26 2616 2616 MS2 28/56 Linfeng_091811_SIN3A_4.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 82.25 5.73 1.00 1 3 884.44373 2651.31662 -1.28 53.56 6336 6336 MS2 34/92 Linfeng_091811_SIN3A_2.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 100.31 5.72 1.00 1 2 829.87146 1658.73564 -2.70 34.15 3924 3924 MS2 23/28 Linfeng_091811_SIN3A_3.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 94.48 5.70 1.00 1 2 1324.11060 2647.21391 -2.28 46.62 5491 5491 MS2 17/44 Linfeng_091811_SIN3A_2.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 106.52 5.70 1.00 1 2 888.43384 1775.86040 -3.81 24.16 2526 2526 MS2 22/28 Linfeng_091811_SIN3A_2.raw High QEQATEENAGVPVGPHLSLAYEDK IPI:IPI00170596.1 1 1 CID 58.81 5.68 1.00 1 3 861.41461 2582.22928 -2.99 32.78 3772 3772 MS2 23/92 Linfeng_091811_SIN3A_4.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 40.15 5.66 1.00 1 3 592.62457 1775.85917 -4.51 23.45 2426 2426 MS2 27/56 Linfeng_091811_SIN3A_2.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 76.94 5.63 1.00 1 3 884.44489 2651.32010 0.03 52.24 6210 6210 MS2 30/92 Linfeng_091811_SIN3A_1.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 92.78 5.62 1.00 1 2 829.87207 1658.73686 -1.96 34.34 3971 3971 MS2 22/28 Linfeng_091811_SIN3A_4.raw High LKEPMDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID 112.66 5.60 1.00 1 3 849.06885 2545.19199 -2.77 47.66 5623 5623 MS2 29/80 Linfeng_091811_SIN3A_2.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 58.81 5.58 1.00 1 2 810.94287 1620.87847 -3.65 40.66 4764 4764 MS2 22/26 Linfeng_091811_SIN3A_1.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 131.07 5.56 1.00 1 2 956.44714 1911.88701 -3.19 35.45 4053 4053 MS2 22/32 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 86.97 5.52 1.00 1 3 859.73187 2577.18106 -3.03 41.96 4936 4936 MS2 31/80 Linfeng_091811_SIN3A_3.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 66.68 5.48 1.00 1 3 592.62476 1775.85971 -4.20 24.44 2564 2564 MS2 31/56 Linfeng_091811_SIN3A_2.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 57.11 5.47 1.00 1 3 592.62524 1775.86118 -3.37 24.36 2471 2471 MS2 28/56 Linfeng_091811_SIN3A_8.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 37.56 5.47 1.00 1 3 674.00201 2019.99149 -4.11 42.05 4914 4914 MS2 26/68 Linfeng_091811_SIN3A_2.raw High QEQATEENAGVPVGPHLSLAYEDK IPI:IPI00170596.1 1 1 CID 57.00 5.47 1.00 1 3 861.41467 2582.22947 -2.92 32.61 3680 3680 MS2 23/92 Linfeng_091811_SIN3A_2.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 101.10 5.47 1.00 1 2 829.87109 1658.73491 -3.14 34.21 3891 3891 MS2 23/28 Linfeng_091811_SIN3A_2.raw High LQFGSQPQVYNDFLDImK IPI:IPI00170596.1 1 1 CID M17(Oxidation) 81.64 5.45 1.00 1 3 720.35242 2159.04270 -2.39 42.38 4954 4954 MS2 34/68 Linfeng_091811_SIN3A_2.raw High HGGGTESLFFDKVR IPI:IPI00170596.1 1 1 CID 57.12 5.44 1.00 1 3 517.26154 1549.77005 -3.73 29.59 3273 3273 MS2 27/52 Linfeng_091811_SIN3A_2.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 104.12 5.44 1.00 1 2 837.86890 1674.73052 -2.70 31.45 3599 3599 MS2 23/28 Linfeng_091811_SIN3A_4.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 139.96 5.43 1.00 1 3 884.44598 2651.32340 1.27 52.16 6201 6201 MS2 35/92 Linfeng_091811_SIN3A_3.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 99.70 5.43 1.00 1 2 829.87305 1658.73882 -0.78 56.02 6604 6604 MS2 20/28 Linfeng_091811_SIN3A_2.raw High LDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 58.56 5.42 1.00 1 3 540.59119 1619.75901 -4.35 25.91 2816 2816 MS2 31/52 Linfeng_091811_SIN3A_3.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 49.19 5.41 1.00 1 3 674.00336 2019.99552 -2.11 41.00 4813 4813 MS2 28/68 Linfeng_091811_SIN3A_3.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 101.07 5.40 1.00 1 2 837.86853 1674.72978 -3.13 31.34 3511 3511 MS2 23/28 Linfeng_091811_SIN3A_2.raw High LDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 43.07 5.37 1.00 1 3 540.59009 1619.75571 -6.38 26.08 2873 2873 MS2 28/52 Linfeng_091811_SIN3A_4.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 69.40 5.37 1.00 1 3 553.58301 1658.73447 -3.40 34.29 3901 3901 MS2 30/56 Linfeng_091811_SIN3A_2.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 124.00 5.36 1.00 1 5 820.80090 4099.97541 0.36 42.51 5005 5005 MS2 48/288 Linfeng_091811_SIN3A_3.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 99.99 5.36 1.00 1 2 837.86890 1674.73052 -2.70 31.21 3539 3539 MS2 22/28 Linfeng_091811_SIN3A_3.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 69.36 5.34 1.00 1 3 592.62567 1775.86246 -2.65 23.98 2550 2550 MS2 29/56 Linfeng_091811_SIN3A_1.raw High LDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 78.43 5.33 1.00 1 2 810.38318 1619.75908 -4.30 25.84 2759 2759 MS2 20/26 Linfeng_091811_SIN3A_2.raw High LKEPMDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID M19(Oxidation) 99.30 5.33 1.00 1 3 854.40131 2561.18937 -1.80 44.34 5238 5238 MS2 29/80 Linfeng_091811_SIN3A_3.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 124.38 5.31 1.00 1 3 884.44635 2651.32450 1.69 52.32 6428 6428 MS2 35/92 Linfeng_091811_SIN3A_5.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 96.36 5.30 1.00 1 3 859.73145 2577.17978 -3.53 41.78 4879 4879 MS2 29/80 Linfeng_091811_SIN3A_2.raw High VEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 71.53 5.29 1.00 1 2 690.35321 1379.69914 -4.49 38.11 4402 4402 MS2 19/22 Linfeng_091811_SIN3A_2.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 62.42 5.27 1.00 1 3 883.07806 2647.21964 -0.12 46.76 5572 5572 MS2 29/88 Linfeng_091811_SIN3A_4.raw High RIPGSTEAFPHQHR IPI:IPI00170596.1 1 1 CID 53.88 5.25 1.00 1 3 544.94800 1632.82944 -3.66 19.23 1844 1844 MS2 26/52 Linfeng_091811_SIN3A_2.raw High QEQATEENAGVPVGPHLSLAYEDK IPI:IPI00170596.1 1 1 CID 55.76 5.25 1.00 1 3 861.41522 2582.23111 -2.28 32.54 3704 3704 MS2 22/92 Linfeng_091811_SIN3A_1.raw High cLVIFNQEVISR IPI:IPI00170596.1 1 1 CID C1(Carbamidomethyl) 55.12 5.21 1.00 1 3 493.26398 1477.77738 -3.96 38.45 4485 4485 MS2 26/44 Linfeng_091811_SIN3A_3.raw High QLQHIVSDEIcVQVTDLYLAENNNGATGGQLNTQNSR IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 136.28 5.19 1.00 1 4 1025.75330 4099.99135 4.25 42.83 5068 5068 MS2 37/216 Linfeng_091811_SIN3A_4.raw High LDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 79.41 5.18 1.00 1 2 810.38196 1619.75664 -5.81 25.97 2825 2825 MS2 20/26 Linfeng_091811_SIN3A_3.raw High AELVQLVSPFLGKFPELFNWFK IPI:IPI00170596.1 1 1 CID 117.30 5.18 1.00 1 3 870.47784 2609.41898 0.85 54.97 6493 6493 MS2 29/84 Linfeng_091811_SIN3A_2.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 69.41 5.17 1.00 1 2 810.94440 1620.88152 -1.77 40.68 4938 4938 MS2 22/26 Linfeng_091811_SIN3A_5.raw High LDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 70.74 5.17 1.00 1 3 540.59106 1619.75864 -4.58 25.79 2751 2751 MS2 33/52 Linfeng_091811_SIN3A_2.raw High GHPDLIMGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID 118.41 5.16 1.00 1 2 1002.50293 2003.99858 -3.14 43.05 5040 5040 MS2 25/34 Linfeng_091811_SIN3A_2.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 46.03 5.16 1.00 1 3 674.00287 2019.99405 -2.84 40.95 4771 4771 MS2 26/68 Linfeng_091811_SIN3A_2.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 37.20 5.14 1.00 1 3 674.00323 2019.99515 -2.29 41.13 4825 4825 MS2 24/68 Linfeng_091811_SIN3A_1.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 84.77 5.13 1.00 1 3 637.96686 1911.88602 -3.71 37.40 4367 4367 MS2 34/64 Linfeng_091811_SIN3A_4.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 70.74 5.13 1.00 1 3 558.91479 1674.72983 -3.10 31.23 3541 3541 MS2 32/56 Linfeng_091811_SIN3A_3.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 80.97 5.13 1.00 1 2 829.87292 1658.73857 -0.93 58.03 6785 6785 MS2 23/28 Linfeng_091811_SIN3A_2.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 109.79 5.12 1.00 1 3 558.91443 1674.72873 -3.76 31.36 3513 3513 MS2 31/56 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 88.41 5.12 1.00 1 3 859.73126 2577.17923 -3.74 42.80 5008 5008 MS2 30/80 Linfeng_091811_SIN3A_2.raw High LDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 67.12 5.11 1.00 1 3 504.59692 1511.77622 -3.37 27.54 2995 2995 MS2 27/52 Linfeng_091811_SIN3A_2.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 65.72 5.11 1.00 1 3 592.62378 1775.85678 -5.85 24.32 2727 2727 MS2 26/56 Linfeng_091811_SIN3A_5.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 51.04 5.10 1.00 1 3 558.91498 1674.73038 -2.78 31.48 3603 3603 MS2 31/56 Linfeng_091811_SIN3A_4.raw High cEDERFELDVVLETNLATIR IPI:IPI00170596.1 3 1 CID C1(Carbamidomethyl) 39.17 5.09 1.00 1 3 808.06976 2422.19474 1.14 53.98 6378 6378 MS2 24/76 Linfeng_091811_SIN3A_2.raw High EPMDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID M17(Oxidation) 82.01 5.05 1.00 1 3 774.00885 2320.01200 -1.26 47.10 5552 5552 MS2 29/72 Linfeng_091811_SIN3A_2.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 47.17 5.04 1.00 1 4 662.55957 2647.21645 -1.33 46.76 5509 5509 MS2 29/132 Linfeng_091811_SIN3A_2.raw High LKEPMDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID 78.79 5.04 1.00 1 3 849.07007 2545.19565 -1.34 47.80 5671 5671 MS2 28/80 Linfeng_091811_SIN3A_3.raw High RIPGSTEAFPHQHR IPI:IPI00170596.1 1 1 CID 56.27 5.01 1.00 1 3 544.94855 1632.83109 -2.65 19.41 1904 1904 MS2 25/52 Linfeng_091811_SIN3A_3.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 123.00 5.00 1.00 1 2 837.86786 1674.72844 -3.93 31.54 3596 3596 MS2 22/28 Linfeng_091811_SIN3A_6.raw High SLLDGNIDSSQYEDSLR IPI:IPI00170596.1 1 1 CID 126.14 5.00 1.00 1 2 956.44482 1911.88237 -5.62 35.61 4135 4135 MS2 16/32 Linfeng_091811_SIN3A_4.raw High KAEQLmSDENcFK IPI:IPI00170596.1 1 1 CID "M6(Oxidation), C11(Carbamidomethyl)" 79.89 4.99 1.00 1 2 808.35547 1615.70366 -3.40 21.68 2181 2181 MS2 18/24 Linfeng_091811_SIN3A_2.raw High FRLDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 72.94 4.98 1.00 1 2 907.97571 1814.94414 -3.70 31.08 3476 3476 MS2 23/30 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 17.63 4.98 1.00 1 3 859.73077 2577.17777 -4.31 44.60 5236 5236 MS2 23/80 Linfeng_091811_SIN3A_2.raw High cEDERFELDVVLETNLATIR IPI:IPI00170596.1 3 1 CID C1(Carbamidomethyl) 39.16 4.97 1.00 1 3 808.06610 2422.18375 -3.40 46.82 5517 5517 MS2 21/76 Linfeng_091811_SIN3A_2.raw High cLVIFNQEVISR IPI:IPI00170596.1 1 1 CID C1(Carbamidomethyl) 66.22 4.97 1.00 1 3 493.26401 1477.77747 -3.89 38.44 4446 4446 MS2 27/44 Linfeng_091811_SIN3A_2.raw High RIPGSTEAFPHQHR IPI:IPI00170596.1 1 1 CID 92.49 4.96 1.00 1 2 816.91833 1632.82939 -3.69 19.36 1863 1863 MS2 16/26 Linfeng_091811_SIN3A_2.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 105.38 4.95 1.00 1 2 829.87183 1658.73638 -2.25 59.17 6884 6884 MS2 22/28 Linfeng_091811_SIN3A_2.raw High ATEGIAmEIDYAScK IPI:IPI00170596.1 1 1 CID "M7(Oxidation), C14(Carbamidomethyl)" 23.81 4.94 1.00 1 2 837.86823 1674.72917 -3.50 34.37 3911 3911 MS2 17/28 Linfeng_091811_SIN3A_2.raw High IPGSTEAFPHQHR IPI:IPI00170596.1 1 1 CID 86.85 4.93 1.00 1 2 738.86847 1476.72966 -3.13 20.72 2051 2051 MS2 19/24 Linfeng_091811_SIN3A_2.raw High KTmENVDSLDKLEcR IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C14(Carbamidomethyl)" 53.87 4.91 1.00 1 3 618.62659 1853.86521 -4.35 24.91 2630 2630 MS2 23/56 Linfeng_091811_SIN3A_2.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 136.65 4.90 1.00 1 2 1010.50000 2019.99272 -3.50 41.06 4785 4785 MS2 22/34 Linfeng_091811_SIN3A_2.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 63.88 4.89 1.00 1 3 527.59723 1580.77713 -2.00 47.36 5640 5640 MS2 28/48 Linfeng_091811_SIN3A_4.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 30.38 4.89 1.00 1 3 674.00311 2019.99479 -2.48 41.20 4856 4856 MS2 24/68 Linfeng_091811_SIN3A_4.raw High KTMENVDSLDKLEcR IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 88.79 4.89 1.00 1 3 613.29376 1837.86673 -6.32 26.96 2916 2916 MS2 26/56 Linfeng_091811_SIN3A_2.raw High LKEPMDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID M19(Oxidation) 121.54 4.89 1.00 1 4 641.05249 2561.18813 -2.28 44.37 5208 5208 MS2 40/120 Linfeng_091811_SIN3A_2.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 67.20 4.87 1.00 1 2 829.87274 1658.73821 -1.15 57.02 6689 6689 MS2 20/28 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 70.75 4.87 1.00 1 2 1289.09436 2577.18144 -2.89 42.13 4923 4923 MS2 18/40 Linfeng_091811_SIN3A_2.raw High GHPDLIMGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID 45.42 4.85 1.00 1 3 668.67230 2004.00235 -1.26 43.09 5080 5080 MS2 27/68 Linfeng_091811_SIN3A_3.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 45.99 4.84 1.00 1 3 674.00281 2019.99387 -2.93 41.30 4853 4853 MS2 24/68 Linfeng_091811_SIN3A_6.raw High SAEAYENFLR IPI:IPI00170596.1 1 1 CID 44.79 4.83 1.00 1 3 400.52615 1199.56391 -4.39 33.92 3852 3852 MS2 24/36 Linfeng_091811_SIN3A_2.raw High GHPDLImGFNTFLPPGYK IPI:IPI00170596.1 1 1 CID M7(Oxidation) 29.12 4.82 1.00 1 3 674.00153 2019.99002 -4.83 41.15 5002 5002 MS2 26/68 Linfeng_091811_SIN3A_5.raw High LKEPmDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID M5(Oxidation) 57.50 4.80 1.00 1 4 641.05292 2561.18984 -1.61 45.62 5366 5366 MS2 37/120 Linfeng_091811_SIN3A_2.raw High TMENVDSLDKLEcR IPI:IPI00170596.1 1 1 CID C13(Carbamidomethyl) 80.28 4.77 1.00 1 2 855.39264 1709.77800 -3.15 30.31 3373 3373 MS2 18/26 Linfeng_091811_SIN3A_2.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 42.02 4.76 1.00 1 3 540.96509 1620.88071 -2.26 40.46 4706 4706 MS2 25/52 Linfeng_091811_SIN3A_2.raw High ATEGIAMEIDYAScK IPI:IPI00170596.1 1 1 CID C14(Carbamidomethyl) 96.06 4.74 1.00 1 2 829.87146 1658.73564 -2.70 60.18 6971 6971 MS2 21/28 Linfeng_091811_SIN3A_2.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 34.81 4.74 1.00 1 3 527.59686 1580.77604 -2.70 47.55 5821 5821 MS2 25/48 Linfeng_091811_SIN3A_5.raw High QEQATEENAGVPVGPHLSLAYEDK IPI:IPI00170596.1 1 1 CID 47.72 4.72 1.00 1 2 1291.61902 2582.23076 -2.42 32.76 3700 3700 MS2 13/46 Linfeng_091811_SIN3A_2.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 90.69 4.72 1.00 1 2 790.89105 1580.77483 -3.46 45.27 5321 5321 MS2 20/24 Linfeng_091811_SIN3A_2.raw High FELDVVLETNLATIR IPI:IPI00170596.1 3 1 CID 34.26 4.71 1.00 1 3 578.32159 1732.95023 1.25 50.51 5982 5982 MS2 29/56 Linfeng_091811_SIN3A_2.raw High IKQIMHHFIPDLLFAQR IPI:IPI00170596.1 1 1 CID 97.04 4.71 1.00 1 3 703.05652 2107.15500 -4.00 37.28 4294 4294 MS2 33/64 Linfeng_091811_SIN3A_2.raw High LKEPMDVDVEDYYPAFLDMVR IPI:IPI00170596.1 1 1 CID 68.30 4.70 1.00 1 4 637.05371 2545.19301 -2.37 47.84 5644 5644 MS2 36/120 Linfeng_091811_SIN3A_2.raw High cEDERFELDVVLETNLATIR IPI:IPI00170596.1 3 1 CID C1(Carbamidomethyl) 55.55 4.69 1.00 1 3 808.07117 2422.19895 2.87 58.09 6791 6791 MS2 24/76 Linfeng_091811_SIN3A_2.raw High VEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 73.83 4.68 1.00 1 2 690.35400 1379.70073 -3.34 38.12 4443 4443 MS2 20/22 Linfeng_091811_SIN3A_3.raw High NQEDLLSEFGQFLPDANSSVLLSK IPI:IPI00170596.1 1 1 CID 132.41 4.67 1.00 1 3 884.44556 2651.32212 0.79 52.08 6177 6177 MS2 35/92 Linfeng_091811_SIN3A_2.raw High WLmGEGLEGLVPcTTTcDTETLHFVSINK IPI:IPI00170596.1 1 1 CID "M3(Oxidation), C13(Carbamidomethyl), C17(Carbamidomethyl)" 4.26 4.67 1.00 1 3 1108.85486 3324.55002 -2.60 46.14 5432 5432 MS2 17/112 Linfeng_091811_SIN3A_2.raw High AELVQLVSPFLGK IPI:IPI00170596.1 1 1 CID 77.12 4.63 1.00 1 2 700.90771 1400.80815 -4.78 45.64 5396 5396 MS2 18/24 Linfeng_091811_SIN3A_1.raw High QImHHFIPDLLFAQR IPI:IPI00170596.1 1 1 CID M3(Oxidation) 37.38 4.59 1.00 1 3 627.99622 1881.97409 -2.77 37.18 4319 4319 MS2 24/56 Linfeng_091811_SIN3A_3.raw High LDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 98.26 4.58 1.00 1 2 756.38953 1511.77178 -6.31 26.57 2862 2862 MS2 17/26 Linfeng_091811_SIN3A_2.raw High LDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 81.80 4.58 1.00 1 2 756.39038 1511.77349 -5.18 26.58 2902 2902 MS2 17/26 Linfeng_091811_SIN3A_1.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 27.17 4.57 1.00 1 3 592.62512 1775.86081 -3.58 24.38 2423 2423 MS2 24/56 Linfeng_091811_SIN3A_10.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 83.66 4.57 1.00 1 2 790.89246 1580.77764 -1.69 47.40 5617 5617 MS2 18/24 Linfeng_091811_SIN3A_1.raw High EAGGNYTPALTEQEVYAQVAR IPI:IPI00170596.1 1 1 CID 32.32 4.54 1.00 1 4 567.52661 2267.08462 -4.12 37.18 4281 4281 MS2 37/120 Linfeng_091811_SIN3A_2.raw High LDNTLGGTSEVIHR IPI:IPI00170596.1 1 1 CID 97.87 4.54 1.00 1 2 756.38977 1511.77226 -5.98 26.64 2917 2917 MS2 17/26 Linfeng_091811_SIN3A_3.raw High AELVQLVSPFLGK IPI:IPI00170596.1 1 1 CID 80.23 4.49 1.00 1 2 700.91046 1400.81365 -0.86 45.69 5441 5441 MS2 20/24 Linfeng_091811_SIN3A_4.raw High KAEQLMSDENcFK IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 44.41 4.49 1.00 1 3 533.90796 1599.70932 -3.07 25.44 2702 2702 MS2 30/48 Linfeng_091811_SIN3A_2.raw High AELVQLVSPFLGK IPI:IPI00170596.1 1 1 CID 82.25 4.49 1.00 1 2 700.90942 1400.81157 -2.34 46.11 5428 5428 MS2 20/24 Linfeng_091811_SIN3A_2.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 38.41 4.48 1.00 1 3 859.73230 2577.18235 -2.54 42.26 4994 4994 MS2 26/80 Linfeng_091811_SIN3A_4.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 22.12 4.47 1.00 1 3 540.96460 1620.87925 -3.17 36.80 4231 4231 MS2 22/52 Linfeng_091811_SIN3A_2.raw High EPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M3(Oxidation), M17(Oxidation)" 103.31 4.47 1.00 1 3 779.34009 2336.00571 -1.77 44.77 5258 5258 MS2 27/72 Linfeng_091811_SIN3A_2.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 85.86 4.46 1.00 1 2 790.89392 1580.78057 0.17 47.36 5618 5618 MS2 20/24 Linfeng_091811_SIN3A_3.raw High KAEQLMSDENcFK IPI:IPI00170596.1 1 1 CID C11(Carbamidomethyl) 76.26 4.43 1.00 1 3 533.90820 1599.71006 -2.61 25.64 2797 2797 MS2 27/48 Linfeng_091811_SIN3A_6.raw High HGGGTESLFFDK IPI:IPI00170596.1 1 1 CID 80.64 4.40 1.00 1 2 647.80499 1294.60271 -2.78 30.17 3401 3401 MS2 20/22 Linfeng_091811_SIN3A_3.raw High TmENVDSLDKLEcR IPI:IPI00170596.1 1 1 CID "M2(Oxidation), C13(Carbamidomethyl)" 79.90 4.39 1.00 1 2 863.38922 1725.77117 -4.13 27.91 3045 3045 MS2 20/26 Linfeng_091811_SIN3A_2.raw High AELVQLVSPFLGK IPI:IPI00170596.1 1 1 CID 76.85 4.39 1.00 1 2 700.90985 1400.81243 -1.73 45.60 5396 5396 MS2 20/24 Linfeng_091811_SIN3A_3.raw High AELVQLVSPFLGK IPI:IPI00170596.1 1 1 CID 75.39 4.38 1.00 1 2 700.90955 1400.81182 -2.17 45.09 5298 5298 MS2 16/24 Linfeng_091811_SIN3A_2.raw High QEQATEENAGVPVGPHLSLAYEDK IPI:IPI00170596.1 1 1 CID 91.22 4.36 1.00 1 3 861.41565 2582.23239 -1.79 32.57 3721 3721 MS2 22/92 Linfeng_091811_SIN3A_3.raw High LKVEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 39.51 4.35 1.00 1 3 540.96515 1620.88089 -2.15 40.49 4748 4748 MS2 25/52 Linfeng_091811_SIN3A_3.raw High EmFTIHAYIAFTmDKLIQSIVR IPI:IPI00170596.1 1 1 CID "M2(Oxidation), M13(Oxidation)" 19.81 4.34 1.00 1 4 665.59442 2659.35586 -2.45 48.13 5681 5681 MS2 35/126 Linfeng_091811_SIN3A_2.raw High EVLNDTWVSFPSWSEDSTFVSSK IPI:IPI00170596.1 2 1 CID 24.62 4.32 1.00 1 3 883.07739 2647.21762 -0.88 46.45 5470 5470 MS2 23/88 Linfeng_091811_SIN3A_2.raw High VEDALSYLDQVK IPI:IPI00170596.1 1 1 CID 55.59 4.28 1.00 1 3 460.57141 1379.69968 -4.10 38.20 4415 4415 MS2 27/44 Linfeng_091811_SIN3A_2.raw High HGGGTESLFFDK IPI:IPI00170596.1 1 1 CID 93.15 4.28 1.00 1 2 647.80511 1294.60295 -2.59 30.41 3462 3462 MS2 20/22 Linfeng_091811_SIN3A_4.raw High HGGGTESLFFDK IPI:IPI00170596.1 1 1 CID 87.00 4.28 1.00 1 2 647.80457 1294.60185 -3.44 30.20 3394 3394 MS2 20/22 Linfeng_091811_SIN3A_1.raw High cEDERFELDVVLETNLATIR IPI:IPI00170596.1 3 1 CID C1(Carbamidomethyl) 48.16 4.27 1.00 1 3 808.06995 2422.19529 1.36 58.47 6778 6778 MS2 22/76 Linfeng_091811_SIN3A_3.raw High LKEPmDVDVEDYYPAFLDmVR IPI:IPI00170596.1 1 1 CID "M5(Oxidation), M19(Oxidation)" 38.54 4.27 1.00 1 3 859.73224 2577.18216 -2.61 42.16 4956 4956 MS2 24/80 Linfeng_091811_SIN3A_1.raw High RLDDQESPVYAAQQR IPI:IPI00170596.1 1 1 CID 42.82 4.27 1.00 1 3 592.62469 1775.85953 -4.30 24.40 2405 2405 MS2 24/56 Linfeng_091811_SIN3A_7.raw High HGGGTESLFFDK IPI:IPI00170596.1 1 1 CID 91.98 4.26 1.00 1 2 647.80457 1294.60185 -3.44 30.18 3355 3355 MS2 20/22 Linfeng_091811_SIN3A_2.raw High SLLNEIESIYDER IPI:IPI00170596.1 1 1 CID 76.58 4.22 1.00 1 2 790.89343 1580.77959 -0.45 47.29 5578 5578 MS2 20/24 Linfeng_091811_SIN3A_2.raw High YMNSDTTSPELR IPI:IPI00170596.1 1 1 CID 69.06 4.16 1.00 1 2 707.31757 1413.62786 -2.59 24.58 2628 2628 MS2 17/22 Linfeng_091811_SIN3A_3.raw High cLVIFNQEVISR IPI:IPI00170596.1 1 1 CID C1(Carbamidomethyl) 54.45 4.16 1.00 1 2 739.39313 1477.77898 -2.87 38.36 4435 4435 MS2 18/22 Linfeng_091811_SIN3A_2.raw High YMNSDTTSPELR IPI:IPI00170596.1 1 1 CID 66.34 4.15 1.00 1 2 707.31616 1413.62505 -4.58 24.57 2500 2500 MS2 17/22 Linfeng_091811_SIN3A_8.raw High IPGSTEAFPHQHR IPI:IPI00170596.1 1 1 CID 82.72 4.10 1.00 1 2 738.86957 1476.73186 -1.65 20.81 2101 2101 MS2 15/24 Linfeng_091811_SIN3A_3.raw IPI:IPI00171611.7 136 15.4 11.27 Histone H3.2 23.53 11 1 227.51 0.00 123.32 23.53 1 1 249.65 23.53 10 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK 1 0 CID "M7(Oxidation), C27(Carbamidomethyl)" 139.96 9.18 1.00 1 4 883.18280 3529.70937 3.24 54.65 6098 6098 MS2 42/186 Linfeng_091611_rIgG_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 143.64 8.49 1.00 1 4 883.18121 3529.70302 1.44 54.67 6455 6455 MS2 41/186 Linfeng_091811_SIN3A_1.raw High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID C27(Carbamidomethyl) 144.63 8.31 1.00 1 4 879.18213 3513.70669 1.04 54.84 6255 6255 MS2 39/186 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 300.00 8.21 1.00 1 3 1177.23901 3529.70249 1.29 54.78 6248 6248 MS2 33/124 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 135.84 7.83 1.00 1 4 883.18201 3529.70620 2.34 54.78 6247 6247 MS2 41/186 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 300.00 7.77 1.00 1 3 1177.23767 3529.69846 0.15 54.66 6454 6454 MS2 33/124 Linfeng_091811_SIN3A_1.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 300.00 7.59 1.00 1 3 1177.24011 3529.70578 2.22 54.77 6304 6304 MS2 33/124 Linfeng_091811_SIN3A_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 141.22 6.93 1.00 1 5 706.74597 3529.70075 0.80 54.79 6249 6249 MS2 49/248 Linfeng_091811_SIN3A_10.raw High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID C27(Carbamidomethyl) 143.21 6.82 1.00 1 4 879.18127 3513.70327 0.07 54.84 6311 6311 MS2 41/186 Linfeng_091811_SIN3A_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 139.63 6.50 1.00 1 4 883.18182 3529.70547 2.13 54.77 6303 6303 MS2 41/186 Linfeng_091811_SIN3A_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00171611.7 1 1 CID "M7(Oxidation), C27(Carbamidomethyl)" 138.79 5.64 1.00 1 5 706.74719 3529.70686 2.53 54.79 6306 6306 MS2 51/248 Linfeng_091811_SIN3A_9.raw IPI:IPI00178047.6 1038 109.8 4.30 Putative uncharacterized protein PELP1 2.60 3 2 19.47 0.00 18.90 2.60 2 2 14.27 1.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLLLESVSGLLQPR 4 0 CID 45.35 4.63 1.00 1 3 513.31525 1537.93119 -0.06 49.53 5856 5856 MS2 29/52 Linfeng_091811_SIN3A_2.raw High LLLLESVSGLLQPR IPI:IPI00178047.6 4 1 CID 63.93 4.56 1.00 1 3 513.31421 1537.92807 -2.09 49.25 5714 5714 MS2 29/52 Linfeng_091611_rIgG_2.raw High LPSLGAGFSQGLK IPI:IPI00178047.6 5 1 CID 102.30 4.28 1.00 1 2 637.85577 1274.70427 -4.79 35.85 4019 4019 MS2 20/24 Linfeng_091611_rIgG_2.raw IPI:IPI00182655.8 486 53.5 5.66 "Keratin, type II cuticular Hb6" 17.08 31 4 91.33 0.00 1207.39 17.08 31 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 123.67 7.29 1.00 1 3 1308.64331 3923.91538 -0.91 46.98 5607 5607 MS2 34/144 Linfeng_091611_rIgG_5.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 93.35 6.63 1.00 1 3 1308.63965 3923.90439 -3.71 46.88 5018 5018 MS2 26/144 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 115.46 6.48 1.00 1 4 981.73035 3923.89956 -4.94 46.85 5015 5015 MS2 38/216 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 128.81 6.41 1.00 1 4 981.73291 3923.90981 -2.32 46.90 5641 5641 MS2 38/216 Linfeng_091611_rIgG_4.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 300.00 6.33 1.00 1 4 981.73303 3923.91030 -2.20 46.97 5606 5606 MS2 38/216 Linfeng_091611_rIgG_5.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 79.66 6.33 1.00 1 3 786.69531 2358.07138 -1.17 47.48 5713 5713 MS2 29/72 Linfeng_091611_rIgG_4.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 69.39 6.19 1.00 1 3 1308.64148 3923.90989 -2.31 46.92 5644 5644 MS2 31/144 Linfeng_091611_rIgG_4.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 70.19 6.06 1.00 1 3 786.69543 2358.07175 -1.02 47.49 5669 5669 MS2 27/72 Linfeng_091611_rIgG_5.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 81.62 5.83 1.00 1 3 786.69458 2358.06919 -2.10 47.43 5081 5081 MS2 29/72 Linfeng_091611_rIgG_3.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 128.14 5.72 1.00 1 2 855.39893 1709.79057 -2.36 29.28 3303 3303 MS2 25/30 Linfeng_091611_rIgG_6.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 57.34 5.72 1.00 1 3 786.69501 2358.07047 -1.56 47.41 5658 5658 MS2 25/72 Linfeng_091611_rIgG_5.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 64.89 5.59 1.00 1 3 786.69659 2358.07523 0.46 47.46 5492 5492 MS2 24/72 Linfeng_091611_rIgG_2.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 112.78 5.40 1.00 1 2 855.39850 1709.78972 -2.86 28.97 3121 3121 MS2 24/30 Linfeng_091611_rIgG_1.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 120.85 5.38 1.00 1 2 855.39917 1709.79106 -2.07 29.05 3137 3137 MS2 24/30 Linfeng_091611_rIgG_2.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 68.25 5.25 1.00 1 2 855.40088 1709.79448 -0.07 30.31 2918 2918 MS2 17/30 Linfeng_091611_rIgG_3.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 99.56 5.23 1.00 1 2 855.39935 1709.79143 -1.86 29.11 3218 3218 MS2 25/30 Linfeng_091611_rIgG_7.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 50.71 5.21 1.00 1 3 570.60107 1709.78867 -3.47 29.11 3340 3340 MS2 27/60 Linfeng_091611_rIgG_4.raw High EccQSNLEPLFEGYIETLR IPI:IPI00182655.8 3 1 CID "C2(Carbamidomethyl), C3(Carbamidomethyl)" 66.94 4.95 1.00 1 2 1179.54004 2358.07280 -0.57 47.62 5731 5731 MS2 18/36 Linfeng_091611_rIgG_4.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 63.34 4.79 1.00 1 3 570.60138 1709.78958 -2.94 29.24 3318 3318 MS2 28/60 Linfeng_091611_rIgG_5.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 64.25 4.63 1.00 1 2 855.39801 1709.78874 -3.43 28.88 3270 3270 MS2 17/30 Linfeng_091611_rIgG_5.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 56.44 4.58 1.00 1 2 855.39935 1709.79143 -1.86 29.15 2932 2932 MS2 17/30 Linfeng_091611_rIgG_10.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 51.69 4.20 1.00 1 2 632.34930 1263.69133 -2.41 39.60 4094 4094 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 52.27 4.19 1.00 1 2 632.34900 1263.69072 -2.90 39.63 4717 4717 MS2 17/20 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 69.77 4.18 1.00 1 2 632.34918 1263.69109 -2.61 40.13 4725 4725 MS2 17/20 Linfeng_091611_rIgG_6.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.54 4.16 1.00 1 2 632.34900 1263.69072 -2.90 39.91 4540 4540 MS2 17/20 Linfeng_091611_rIgG_2.raw High LcEGVGSVNVcVSSSR IPI:IPI00032541.1;IPI:IPI00182655.8 2 2 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 60.07 4.15 1.00 1 2 855.39850 1709.78972 -2.86 28.67 3279 3279 MS2 16/30 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.75 4.13 1.00 1 2 632.34851 1263.68974 -3.67 40.65 4228 4228 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.95 4.11 1.00 1 2 632.34729 1263.68730 -5.60 39.89 4555 4555 MS2 17/20 Linfeng_091611_rIgG_1.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.57 4.11 1.00 1 2 632.35034 1263.69341 -0.77 57.58 6839 6839 MS2 17/20 Linfeng_091611_rIgG_5.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.39 4.11 1.00 1 2 632.34882 1263.69036 -3.19 42.78 4500 4500 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.31 4.09 1.00 1 2 632.35034 1263.69341 -0.77 52.52 6295 6295 MS2 15/20 Linfeng_091611_rIgG_5.raw IPI:IPI00217430.1 359 40.6 5.49 Isoform 2 of NLR family CARD domain-containing protein 4 6.69 1 1 20.71 0.00 4.56 6.69 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EWNYPLFQDLNGQSGLTDSLGNLK IPI:IPI00217430.1 1 1 CID 1.00 4.56 1.00 1 3 903.76880 2709.29184 -8.77 47.68 5693 5693 MS2 10/92 Linfeng_091611_rIgG_5.raw IPI:IPI00219038.9 136 15.3 11.27 Histone H3.3 23.53 9 1 225.00 0.00 119.35 23.53 1 1 232.75 23.53 8 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 300.00 9.07 1.00 1 3 1146.57324 3437.70517 0.13 54.62 6449 6449 MS2 34/124 Linfeng_091811_SIN3A_1.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 140.62 7.96 1.00 1 3 1146.57544 3437.71177 2.04 54.74 6300 6300 MS2 37/124 Linfeng_091811_SIN3A_9.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 138.41 7.92 1.00 1 3 1146.57532 3437.71140 1.94 54.73 6241 6241 MS2 31/124 Linfeng_091811_SIN3A_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 127.30 7.58 1.00 1 4 860.18384 3437.71352 2.56 54.72 6240 6240 MS2 42/186 Linfeng_091811_SIN3A_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK 1 0 CID C27(Carbamidomethyl) 136.37 7.38 1.00 1 4 860.18213 3437.70669 0.57 54.61 6092 6092 MS2 42/186 Linfeng_091611_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 91.35 6.12 1.00 1 5 688.34778 3437.70979 1.47 54.75 6301 6301 MS2 53/248 Linfeng_091811_SIN3A_9.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 112.97 6.03 1.00 1 4 860.18298 3437.71010 1.56 54.63 6450 6450 MS2 39/186 Linfeng_091811_SIN3A_1.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 114.07 5.31 1.00 1 4 860.18292 3437.70986 1.49 54.72 6297 6297 MS2 38/186 Linfeng_091811_SIN3A_9.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK IPI:IPI00219038.9 1 1 CID C27(Carbamidomethyl) 97.46 5.01 1.00 1 5 688.34790 3437.71040 1.65 54.76 6245 6245 MS2 54/248 Linfeng_091811_SIN3A_10.raw IPI:IPI00219097.4 209 24.0 7.81 High mobility group protein B2 9.09 1 1 5.46 0.00 9.47 9.09 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGEMWSEQSAKDKQPYEQK IPI:IPI00219097.4 1 1 CID 3.31 4.32 1.00 1 3 761.36548 2282.08188 2.63 42.03 4728 4728 MS2 12/72 Linfeng_091811_SIN3A_7.raw IPI:IPI00221089.5 151 17.2 10.54 40S ribosomal protein S13 8.61 2 1 17.30 0.00 26.35 8.61 1 1 16.84 8.61 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KGLTPSQIGVILR IPI:IPI00221089.5 1 1 CID 50.78 5.42 1.00 1 3 461.28754 1381.84806 -3.31 33.20 3672 3672 MS2 30/48 Linfeng_091611_rIgG_9.raw High KGLTPSQIGVILR 1 0 CID 53.05 4.46 1.00 1 3 461.28769 1381.84851 -2.98 33.58 3764 3764 MS2 29/48 Linfeng_091811_SIN3A_9.raw IPI:IPI00291093.3 210 24.5 5.95 "DNA-directed RNA polymerases I, II, and III subunit RPABC1" 8.10 1 1 16.32 0.00 12.16 8.10 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GYLVTQDELDQTLEEFK IPI:IPI00291093.3 1 1 CID 78.70 5.70 1.00 1 2 1014.49316 2027.97905 -0.90 46.05 5295 5295 MS2 23/32 Linfeng_091811_SIN3A_8.raw IPI:IPI00291755.6 1887 205.0 6.81 Isoform 1 of Nuclear pore membrane glycoprotein 210 2.76 3 3 45.54 0.00 48.67 2.76 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LQLLNPEIEAEQILmSPNSYIK IPI:IPI00291755.6 1 1 CID M15(Oxidation) 116.66 6.29 1.00 1 3 853.78296 2559.33432 -1.27 48.85 5664 5664 MS2 31/84 Linfeng_091611_rIgG_2.raw High GVAIGQTSLTASVTNK IPI:IPI00291755.6 1 1 CID 120.48 4.85 1.00 1 2 773.92334 1546.83940 -2.70 30.06 2885 2885 MS2 19/30 Linfeng_091611_rIgG_3.raw High AVDPTSGQLYGLAR IPI:IPI00291755.6 1 1 CID 90.61 4.43 1.00 1 2 724.37872 1447.75017 -2.67 32.45 3584 3584 MS2 20/26 Linfeng_091611_rIgG_2.raw IPI:IPI00292387.6 699 73.6 9.47 Isoform Alpha of Nucleolar and coiled-body phosphoprotein 1 3.29 1 1 61.39 0.00 40.39 3.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATGATQQDANASSLLDIYSFWLK IPI:IPI00292387.6 2 1 CID 121.48 7.35 1.00 1 3 834.08398 2500.23740 0.74 52.61 5721 5721 MS2 34/88 Linfeng_091611_rIgG_3.raw IPI:IPI00293533.4 522 53.2 5.31 Nuclear pore glycoprotein p62 2.68 1 1 5.80 0.00 10.71 2.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELEDLLSPLEELVK IPI:IPI00293533.4 1 1 CID 45.11 4.35 1.00 1 2 813.94452 1626.88176 -1.21 52.62 6347 6347 MS2 17/26 Linfeng_091611_rIgG_4.raw IPI:IPI00293655.3 740 82.4 7.23 ATP-dependent RNA helicase DDX1 2.84 1 1 16.04 0.00 15.82 2.84 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLVLDEADGLLSQGYSDFINR IPI:IPI00293655.3 1 1 CID 115.80 7.32 1.00 1 3 791.39655 2372.17508 -0.80 53.12 5783 5783 MS2 37/80 Linfeng_091611_rIgG_3.raw IPI:IPI00296069.2 1257 142.7 5.10 Isoform I of AT-rich interactive domain-containing protein 4A 30.39 76 26 32.19 0.00 753.29 30.39 76 26 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HFAESETLDQLPLTNPEHFGTPVIAK IPI:IPI00296069.2 4 1 CID 300.00 9.59 1.00 1 3 964.48730 2891.44736 -3.51 37.77 4359 4359 MS2 42/100 Linfeng_091811_SIN3A_2.raw High ISSFGQNEAGSEPHIEAHSLELSSLDNK IPI:IPI00296069.2 3 1 CID 300.00 7.89 1.00 1 3 999.47559 2996.41220 -3.71 33.12 3748 3748 MS2 38/108 Linfeng_091811_SIN3A_2.raw High ENEGmPSLIAESNQcIQQLTSER IPI:IPI00296069.2 3 1 CID "M5(Oxidation), C15(Carbamidomethyl)" 92.80 7.39 1.00 1 3 884.07178 2650.20078 -2.89 40.49 4710 4710 MS2 34/88 Linfeng_091811_SIN3A_2.raw High ENEGMPSLIAESNQcIQQLTSER IPI:IPI00296069.2 3 1 CID C15(Carbamidomethyl) 300.00 6.94 1.00 1 3 878.73962 2634.20432 -3.49 44.57 5232 5232 MS2 31/88 Linfeng_091811_SIN3A_2.raw High DNDTENKDVDDDYETAEK IPI:IPI00296069.2 3 1 CID 113.56 6.82 1.00 1 3 705.95148 2115.83988 -3.54 21.70 2183 2183 MS2 30/68 Linfeng_091811_SIN3A_2.raw High LKDNDTENKDVDDDYETAEK IPI:IPI00296069.2 3 1 CID 300.00 6.46 1.00 1 3 786.34454 2357.01908 -3.11 20.36 2002 2002 MS2 33/76 Linfeng_091811_SIN3A_2.raw High STEIDDGEVLYLVHYYGWNVR IPI:IPI00296069.2 3 1 CID 135.76 6.30 1.00 1 4 632.80615 2528.20278 -2.58 47.26 5574 5574 MS2 39/120 Linfeng_091811_SIN3A_2.raw High DLEESMEEALKLDQEmPLTEVK IPI:IPI00296069.2 3 1 CID M16(Oxidation) 135.76 6.23 1.00 1 3 865.07880 2593.22184 -1.64 44.79 5260 5260 MS2 30/84 Linfeng_091811_SIN3A_2.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 115.69 6.20 1.00 1 2 854.42395 1707.84062 -1.77 32.41 3699 3699 MS2 25/32 Linfeng_091811_SIN3A_3.raw High LEVGENEQIVQIFGNK IPI:IPI00296069.2 3 1 CID 62.64 6.16 1.00 1 3 606.31830 1816.94034 -2.04 40.10 4713 4713 MS2 34/60 Linfeng_091811_SIN3A_4.raw High LEVGENEQIVQIFGNK IPI:IPI00296069.2 3 1 CID 62.11 6.13 1.00 1 3 606.31842 1816.94071 -1.83 39.85 4664 4664 MS2 33/60 Linfeng_091811_SIN3A_3.raw High LEVGENEQIVQIFGNK IPI:IPI00296069.2 3 1 CID 96.41 6.12 1.00 1 2 908.97333 1816.93938 -2.57 39.86 4629 4629 MS2 23/30 Linfeng_091811_SIN3A_2.raw High LTDASWYTVVFDDGDER IPI:IPI00296069.2 4 1 CID 125.46 6.11 1.00 1 2 994.94574 1988.88420 -1.56 44.22 5223 5223 MS2 23/32 Linfeng_091811_SIN3A_3.raw High DNDTENKDVDDDYETAEK IPI:IPI00296069.2 3 1 CID 112.54 6.09 1.00 1 3 705.95178 2115.84079 -3.10 21.71 2226 2226 MS2 29/68 Linfeng_091811_SIN3A_3.raw High DNDTENKDVDDDYETAEKK IPI:IPI00296069.2 3 1 CID 108.33 6.08 1.00 1 3 748.65009 2243.93570 -2.95 20.40 2007 2007 MS2 23/72 Linfeng_091811_SIN3A_2.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 106.92 6.06 1.00 1 2 854.42297 1707.83867 -2.92 32.45 3658 3658 MS2 24/32 Linfeng_091811_SIN3A_2.raw High LEVGENEQIVQIFGNK IPI:IPI00296069.2 3 1 CID 92.67 6.00 1.00 1 2 908.97388 1816.94048 -1.96 39.95 4678 4678 MS2 23/30 Linfeng_091811_SIN3A_3.raw High KTEEEVPEEELDPEER IPI:IPI00296069.2 4 1 CID 47.66 5.98 1.00 1 3 653.29547 1957.87186 -7.93 26.84 2938 2938 MS2 26/60 Linfeng_091811_SIN3A_1.raw High WSFQLNELDNMNSTER IPI:IPI00296069.2 1 1 CID 97.73 5.96 1.00 1 3 661.96497 1983.88034 -3.15 41.57 4852 4852 MS2 29/60 Linfeng_091811_SIN3A_2.raw High WSFQLNELDNmNSTER IPI:IPI00296069.2 1 1 CID M11(Oxidation) 88.69 5.90 1.00 1 3 667.29468 1999.86948 -6.02 39.22 4547 4547 MS2 30/60 Linfeng_091811_SIN3A_2.raw High WSFQLNELDNMNSTER IPI:IPI00296069.2 1 1 CID 124.07 5.90 1.00 1 2 992.44397 1983.88066 -2.99 41.60 4855 4855 MS2 23/30 Linfeng_091811_SIN3A_2.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 113.74 5.85 1.00 1 2 854.42328 1707.83928 -2.56 32.47 3695 3695 MS2 23/32 Linfeng_091811_SIN3A_1.raw High KTEEEVPEEELDPEERDNFLQQLYK IPI:IPI00296069.2 4 1 CID 136.37 5.80 1.00 1 4 777.61932 3107.45547 -4.45 37.89 4374 4374 MS2 41/144 Linfeng_091811_SIN3A_2.raw High LEVGENEQIVQIFGNK IPI:IPI00296069.2 3 1 CID 91.49 5.78 1.00 1 3 606.31842 1816.94071 -1.83 39.84 4626 4626 MS2 33/60 Linfeng_091811_SIN3A_2.raw High QIYMDLGIPILNSAASYNVK IPI:IPI00296069.2 5 1 CID 81.71 5.74 1.00 1 3 737.38788 2210.14908 -1.61 47.55 5609 5609 MS2 34/76 Linfeng_091811_SIN3A_2.raw High ENEGMPSLIAESNQcIQQLTSER IPI:IPI00296069.2 3 1 CID C15(Carbamidomethyl) 62.99 5.71 1.00 1 3 878.74152 2634.21000 -1.34 44.75 5289 5289 MS2 29/88 Linfeng_091811_SIN3A_3.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 55.46 5.62 1.00 1 3 581.58740 1742.74765 -3.55 31.15 3486 3486 MS2 33/56 Linfeng_091811_SIN3A_2.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 100.83 5.55 1.00 1 2 854.42242 1707.83757 -3.56 32.62 3517 3517 MS2 24/32 Linfeng_091811_SIN3A_7.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 114.67 5.53 1.00 1 2 854.42273 1707.83818 -3.20 32.58 3732 3732 MS2 26/32 Linfeng_091811_SIN3A_6.raw High KTEEEVPEEELDPEER IPI:IPI00296069.2 4 1 CID 45.49 5.49 1.00 1 3 653.29675 1957.87571 -5.97 27.05 3005 3005 MS2 26/60 Linfeng_091811_SIN3A_4.raw High QIYmDLGIPILNSAASYNVK IPI:IPI00296069.2 5 1 CID M4(Oxidation) 65.54 5.43 1.00 1 3 742.71948 2226.14389 -1.65 44.45 5218 5218 MS2 30/76 Linfeng_091811_SIN3A_2.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 81.21 5.37 1.00 1 2 871.87811 1742.74895 -2.81 31.11 3513 3513 MS2 22/28 Linfeng_091811_SIN3A_1.raw High IENGMEMTNTVSQER IPI:IPI00296069.2 3 1 CID 106.93 5.35 1.00 1 2 869.88763 1738.76799 -3.20 27.53 2994 2994 MS2 23/28 Linfeng_091811_SIN3A_2.raw High LTDASWYTVVFDDGDER IPI:IPI00296069.2 4 1 CID 85.65 5.30 1.00 1 3 663.63257 1988.88315 -2.09 44.18 5184 5184 MS2 32/64 Linfeng_091811_SIN3A_2.raw High KTEEEVPEEELDPEER IPI:IPI00296069.2 4 1 CID 60.32 5.28 1.00 1 3 653.29779 1957.87882 -4.38 26.89 2952 2952 MS2 27/60 Linfeng_091811_SIN3A_3.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 107.86 5.21 1.00 1 2 871.87897 1742.75066 -1.83 31.08 3522 3522 MS2 23/28 Linfeng_091811_SIN3A_3.raw High IENGmEmTNTVSQER IPI:IPI00296069.2 3 1 CID "M5(Oxidation), M7(Oxidation)" 80.40 5.21 1.00 1 2 885.88409 1770.76091 -1.39 18.46 1736 1736 MS2 21/28 Linfeng_091811_SIN3A_2.raw High IENGMEmTNTVSQER IPI:IPI00296069.2 3 1 CID M7(Oxidation) 98.72 5.20 1.00 1 2 877.88452 1754.76177 -3.82 22.36 2275 2275 MS2 24/28 Linfeng_091811_SIN3A_2.raw High KDLEESMEEALK IPI:IPI00296069.2 3 1 CID 31.21 5.18 1.00 1 3 474.56418 1421.67798 -3.47 34.91 3982 3982 MS2 27/44 Linfeng_091811_SIN3A_2.raw High NLNFEQHFERENEGMPSLIAESNQcIQQLTSER IPI:IPI00296069.2 3 1 CID C25(Carbamidomethyl) 81.05 5.16 1.00 1 4 987.95905 3948.81435 -2.47 42.92 5023 5023 MS2 34/192 Linfeng_091811_SIN3A_2.raw High WSFQLNELDNmNSTER IPI:IPI00296069.2 1 1 CID M11(Oxidation) 88.77 5.14 1.00 1 2 1000.43958 1999.87187 -4.82 39.31 4559 4559 MS2 17/30 Linfeng_091811_SIN3A_2.raw High QDNTTQLVQDDQVK IPI:IPI00296069.2 4 1 CID 64.81 5.14 1.00 1 2 816.39435 1631.78142 -3.53 24.95 2635 2635 MS2 19/26 Linfeng_091811_SIN3A_2.raw High ISSFGQNEAGSEPHIEAHSLELSSLDNK IPI:IPI00296069.2 3 1 CID 122.88 5.12 1.00 1 4 749.85822 2996.41103 -4.10 33.10 3745 3745 MS2 39/162 Linfeng_091811_SIN3A_2.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 19.96 5.10 1.00 1 3 461.56329 1382.67533 -3.28 30.25 3365 3365 MS2 22/48 Linfeng_091811_SIN3A_2.raw High TEWYPALVISPScNDDITVK IPI:IPI00296069.2 4 1 CID C13(Carbamidomethyl) 47.39 5.06 1.00 1 2 1154.55798 2308.10869 -3.46 42.63 4987 4987 MS2 13/38 Linfeng_091811_SIN3A_2.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 108.47 5.02 1.00 1 2 871.87799 1742.74870 -2.95 31.15 3485 3485 MS2 22/28 Linfeng_091811_SIN3A_2.raw High IENGmEMTNTVSQER IPI:IPI00296069.2 3 1 CID M5(Oxidation) 95.78 5.01 1.00 1 2 877.88556 1754.76384 -2.64 24.00 2503 2503 MS2 22/28 Linfeng_091811_SIN3A_2.raw High ISSFGQNEAGSEPHIEAHSLELSSLDNK IPI:IPI00296069.2 3 1 CID 89.13 4.98 1.00 1 4 749.85828 2996.41128 -4.02 32.99 3775 3775 MS2 36/162 Linfeng_091811_SIN3A_3.raw High LVYHQGGcDNIDSGAVWK IPI:IPI00296069.2 5 1 CID C8(Carbamidomethyl) 72.28 4.92 1.00 1 3 673.64880 2018.93186 -3.52 29.72 3291 3291 MS2 26/68 Linfeng_091811_SIN3A_2.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 69.62 4.92 1.00 1 2 691.84137 1382.67546 -3.18 30.11 3346 3346 MS2 20/24 Linfeng_091811_SIN3A_2.raw High TEWYPALVISPScNDDITVK IPI:IPI00296069.2 4 1 CID C13(Carbamidomethyl) 103.87 4.90 1.00 1 3 770.04144 2308.10978 -2.99 42.47 4966 4966 MS2 29/76 Linfeng_091811_SIN3A_2.raw High KTEEEVPEEELDPEER IPI:IPI00296069.2 4 1 CID 67.35 4.89 1.00 1 3 653.29779 1957.87882 -4.38 26.85 2901 2901 MS2 32/60 Linfeng_091811_SIN3A_2.raw High QDNTTQLVQDDQVK IPI:IPI00296069.2 4 1 CID 79.29 4.89 1.00 1 2 816.39526 1631.78325 -2.41 25.07 2499 2499 MS2 19/26 Linfeng_091811_SIN3A_7.raw High QDNTTQLVQDDQVK IPI:IPI00296069.2 4 1 CID 70.56 4.87 1.00 1 2 816.39514 1631.78301 -2.56 25.06 2696 2696 MS2 18/26 Linfeng_091811_SIN3A_3.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 23.74 4.82 1.00 1 3 581.58777 1742.74875 -2.92 31.06 3519 3519 MS2 34/56 Linfeng_091811_SIN3A_3.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 51.46 4.79 1.00 1 2 691.84125 1382.67522 -3.36 30.07 3376 3376 MS2 19/24 Linfeng_091811_SIN3A_1.raw High LVYHQGGcDNIDSGAVWK IPI:IPI00296069.2 5 1 CID C8(Carbamidomethyl) 48.20 4.66 1.00 1 3 673.64716 2018.92691 -5.97 29.72 3329 3329 MS2 29/68 Linfeng_091811_SIN3A_1.raw High STEIDDGEVLYLVHYYGWNVR IPI:IPI00296069.2 3 1 CID 67.11 4.65 1.00 1 3 843.40601 2528.20346 -2.31 47.19 5599 5599 MS2 27/80 Linfeng_091811_SIN3A_3.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 57.79 4.65 1.00 1 2 691.84137 1382.67546 -3.18 30.24 3198 3198 MS2 18/24 Linfeng_091811_SIN3A_7.raw High AADEPAYLTVGTDVSAK IPI:IPI00296069.2 6 1 CID 81.93 4.65 1.00 1 3 569.95056 1707.83713 -3.82 32.52 3668 3668 MS2 31/64 Linfeng_091811_SIN3A_2.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 54.37 4.65 1.00 1 2 691.84131 1382.67534 -3.27 30.25 3423 3423 MS2 19/24 Linfeng_091811_SIN3A_6.raw High QDNTTQLVQDDQVK IPI:IPI00296069.2 4 1 CID 73.62 4.63 1.00 1 2 816.39465 1631.78203 -3.16 25.18 2733 2733 MS2 18/26 Linfeng_091811_SIN3A_6.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 65.29 4.60 1.00 1 2 691.84192 1382.67656 -2.39 30.25 3441 3441 MS2 17/24 Linfeng_091811_SIN3A_4.raw High LTDASWYTVVFDDGDER IPI:IPI00296069.2 4 1 CID 67.63 4.59 1.00 1 2 994.94452 1988.88176 -2.79 44.32 5230 5230 MS2 13/32 Linfeng_091811_SIN3A_1.raw High KYLYGFEEYcR IPI:IPI00296069.2;IPI:IPI00328828.5 10 2 CID C10(Carbamidomethyl) 64.70 4.51 1.00 1 3 509.90103 1527.68854 -3.38 31.39 3517 3517 MS2 25/40 Linfeng_091811_SIN3A_2.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 68.88 4.51 1.00 1 2 691.84253 1382.67778 -1.50 30.08 3388 3388 MS2 20/24 Linfeng_091811_SIN3A_3.raw High LVYHQGGcDNIDSGAVWK IPI:IPI00296069.2 5 1 CID C8(Carbamidomethyl) 86.65 4.51 1.00 1 3 673.64923 2018.93314 -2.89 29.68 3334 3334 MS2 29/68 Linfeng_091811_SIN3A_3.raw High LDQEMPLTEVK IPI:IPI00296069.2 3 1 CID 46.99 4.50 1.00 1 2 651.83148 1302.65569 -4.12 30.99 3464 3464 MS2 17/20 Linfeng_091811_SIN3A_2.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 56.58 4.43 1.00 1 2 691.84088 1382.67449 -3.89 30.31 3234 3234 MS2 15/24 Linfeng_091811_SIN3A_10.raw High NFSSATEDEIDQcVK IPI:IPI00296069.2 3 1 CID C13(Carbamidomethyl) 34.44 4.43 1.00 1 3 581.58752 1742.74802 -3.34 31.13 3516 3516 MS2 23/56 Linfeng_091811_SIN3A_1.raw High QDNTTQLVQDDQVK IPI:IPI00296069.2 4 1 CID 50.71 4.42 1.00 1 2 816.39539 1631.78349 -2.26 24.92 2680 2680 MS2 16/26 Linfeng_091811_SIN3A_1.raw High TSDGSFQEAIISK IPI:IPI00296069.2 4 1 CID 71.81 4.33 1.00 1 2 691.84125 1382.67522 -3.36 30.36 3340 3340 MS2 15/24 Linfeng_091811_SIN3A_9.raw High IENGMEmTNTVSQER IPI:IPI00296069.2 3 1 CID M7(Oxidation) 22.93 4.27 1.00 1 3 585.59229 1754.76230 -3.51 24.08 2514 2514 MS2 25/56 Linfeng_091811_SIN3A_2.raw High STLSSNmPYGLSK IPI:IPI00296069.2 3 1 CID M7(Oxidation) 68.50 4.23 1.00 1 2 700.83789 1400.66850 -2.96 25.65 2778 2778 MS2 18/24 Linfeng_091811_SIN3A_3.raw High STLSSNMPYGLSK IPI:IPI00296069.2 3 1 CID 72.91 4.15 1.00 1 2 692.84015 1384.67302 -3.41 30.87 3448 3448 MS2 18/24 Linfeng_091811_SIN3A_2.raw High STLSSNmPYGLSK IPI:IPI00296069.2 3 1 CID M7(Oxidation) 71.80 4.07 1.00 1 2 700.83734 1400.66741 -3.75 25.63 2729 2729 MS2 18/24 Linfeng_091811_SIN3A_2.raw IPI:IPI00297795.4 493 54.2 5.64 "Keratin, type II cuticular Hb3" 12.17 27 3 86.28 0.00 1241.61 12.17 27 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 123.67 7.29 1.00 1 3 1308.64331 3923.91538 -0.91 46.98 5607 5607 MS2 34/144 Linfeng_091611_rIgG_5.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 93.35 6.63 1.00 1 3 1308.63965 3923.90439 -3.71 46.88 5018 5018 MS2 26/144 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 115.46 6.48 1.00 1 4 981.73035 3923.89956 -4.94 46.85 5015 5015 MS2 38/216 Linfeng_091611_rIgG_3.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 128.81 6.41 1.00 1 4 981.73291 3923.90981 -2.32 46.90 5641 5641 MS2 38/216 Linfeng_091611_rIgG_4.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 300.00 6.33 1.00 1 4 981.73303 3923.91030 -2.20 46.97 5606 5606 MS2 38/216 Linfeng_091611_rIgG_5.raw High SGGVcGPSPPcITTVSVNESLLTPLNLEIDPNAQcVK IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 5 3 CID "C5(Carbamidomethyl), C11(Carbamidomethyl), C35(Carbamidomethyl)" 69.39 6.19 1.00 1 3 1308.64148 3923.90989 -2.31 46.92 5644 5644 MS2 31/144 Linfeng_091611_rIgG_4.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 65.63 4.55 1.00 1 2 710.84167 1420.67607 -3.57 42.70 4922 4922 MS2 19/22 Linfeng_091611_rIgG_1.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 58.94 4.52 1.00 1 2 710.84253 1420.67778 -2.37 42.77 5065 5065 MS2 19/22 Linfeng_091611_rIgG_6.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 58.31 4.52 1.00 1 2 710.84161 1420.67595 -3.66 42.63 5108 5108 MS2 19/22 Linfeng_091611_rIgG_4.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 57.36 4.40 1.00 1 2 710.84192 1420.67656 -3.23 42.69 5066 5066 MS2 19/22 Linfeng_091611_rIgG_5.raw High DLNmDcIVAEIK IPI:IPI00297795.4 1 1 CID "M4(Oxidation), C6(Carbamidomethyl)" 57.72 4.39 1.00 1 2 718.83868 1436.67009 -4.15 34.80 4087 4087 MS2 19/22 Linfeng_091611_rIgG_4.raw High DLNmDcIVAEIK IPI:IPI00297795.4 1 1 CID "M4(Oxidation), C6(Carbamidomethyl)" 66.70 4.33 1.00 1 2 718.83954 1436.67180 -2.97 34.97 4068 4068 MS2 18/22 Linfeng_091611_rIgG_5.raw High DLNmDcIVAEIK IPI:IPI00297795.4 1 1 CID "M4(Oxidation), C6(Carbamidomethyl)" 55.77 4.31 1.00 1 2 718.83954 1436.67180 -2.97 35.02 3913 3913 MS2 18/22 Linfeng_091611_rIgG_2.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 62.51 4.30 1.00 1 2 710.84210 1420.67693 -2.97 42.59 4476 4476 MS2 19/22 Linfeng_091611_rIgG_3.raw High DLNmDcIVAEIK IPI:IPI00297795.4 1 1 CID "M4(Oxidation), C6(Carbamidomethyl)" 80.11 4.30 1.00 1 2 718.83966 1436.67204 -2.80 34.89 3493 3493 MS2 19/22 Linfeng_091611_rIgG_3.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 54.26 4.28 1.00 1 2 710.84265 1420.67803 -2.20 42.68 4894 4894 MS2 19/22 Linfeng_091611_rIgG_2.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 51.69 4.20 1.00 1 2 632.34930 1263.69133 -2.41 39.60 4094 4094 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 52.27 4.19 1.00 1 2 632.34900 1263.69072 -2.90 39.63 4717 4717 MS2 17/20 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 69.77 4.18 1.00 1 2 632.34918 1263.69109 -2.61 40.13 4725 4725 MS2 17/20 Linfeng_091611_rIgG_6.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.54 4.16 1.00 1 2 632.34900 1263.69072 -2.90 39.91 4540 4540 MS2 17/20 Linfeng_091611_rIgG_2.raw High DLNMDcIVAEIK IPI:IPI00297795.4 1 1 CID C6(Carbamidomethyl) 45.85 4.16 1.00 1 2 710.84277 1420.67827 -2.02 42.81 4989 4989 MS2 17/22 Linfeng_091611_rIgG_7.raw High DLNmDcIVAEIK IPI:IPI00297795.4 1 1 CID "M4(Oxidation), C6(Carbamidomethyl)" 80.99 4.16 1.00 1 2 718.84021 1436.67314 -2.03 35.21 4083 4083 MS2 18/22 Linfeng_091611_rIgG_6.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.75 4.13 1.00 1 2 632.34851 1263.68974 -3.67 40.65 4228 4228 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.95 4.11 1.00 1 2 632.34729 1263.68730 -5.60 39.89 4555 4555 MS2 17/20 Linfeng_091611_rIgG_1.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.57 4.11 1.00 1 2 632.35034 1263.69341 -0.77 57.58 6839 6839 MS2 17/20 Linfeng_091611_rIgG_5.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.39 4.11 1.00 1 2 632.34882 1263.69036 -3.19 42.78 4500 4500 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.31 4.09 1.00 1 2 632.35034 1263.69341 -0.77 52.52 6295 6295 MS2 15/20 Linfeng_091611_rIgG_5.raw IPI:IPI00300408.3 273 29.3 8.18 Copper homeostasis protein cutC homolog 35.16 7 5 13.43 0.00 77.06 35.16 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLTSGcDSSALEGLPLIK IPI:IPI00300408.3 2 1 CID C6(Carbamidomethyl) 122.23 6.34 1.00 1 2 930.49023 1859.97319 -2.79 40.04 4473 4473 MS2 23/34 Linfeng_091811_SIN3A_7.raw High IELcSGLSEGGTTPSMGVLQVVK IPI:IPI00300408.3 1 1 CID C4(Carbamidomethyl) 69.17 5.76 1.00 1 3 788.06812 2362.18979 -4.06 40.89 4582 4582 MS2 36/88 Linfeng_091811_SIN3A_7.raw High VLTSGcDSSALEGLPLIK IPI:IPI00300408.3 2 1 CID C6(Carbamidomethyl) 82.03 5.70 1.00 1 3 620.66211 1859.97177 -3.55 39.99 4466 4466 MS2 32/68 Linfeng_091811_SIN3A_7.raw High NSSVAmGASLScSEYSLK IPI:IPI00300408.3 1 1 CID "M6(Oxidation), C12(Carbamidomethyl)" 125.89 5.53 1.00 1 2 953.92670 1906.84612 -3.18 29.45 3092 3092 MS2 21/34 Linfeng_091811_SIN3A_7.raw High IELcSGLSEGGTTPSmGVLQVVK IPI:IPI00300408.3 1 1 CID "C4(Carbamidomethyl), M16(Oxidation)" 95.23 5.22 1.00 1 3 793.39655 2378.17508 -8.08 37.73 4175 4175 MS2 34/88 Linfeng_091811_SIN3A_7.raw High AFDmVHDPmAALETLLTLGFER IPI:IPI00300408.3 2 1 CID "M4(Oxidation), M9(Oxidation)" 23.64 4.34 1.00 1 3 837.07483 2509.20993 -0.15 54.00 6153 6153 MS2 18/84 Linfeng_091811_SIN3A_7.raw High ILEGSGATEFHcSAR IPI:IPI00300408.3 1 1 CID C12(Carbamidomethyl) 119.70 4.20 1.00 1 2 817.88037 1634.75347 -3.51 24.60 2432 2432 MS2 19/28 Linfeng_091811_SIN3A_7.raw IPI:IPI00305289.2 1056 119.1 5.64 Kinesin-like protein KIF11 2.94 2 2 18.25 0.00 53.93 2.94 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDLLSSLEmILSPTVVSILK IPI:IPI00305289.2 1 1 CID M9(Oxidation) 80.88 5.20 1.00 1 3 725.74463 2175.21933 -0.01 55.64 6072 6072 MS2 31/76 Linfeng_091611_rIgG_3.raw High TVLQELINVLK IPI:IPI00305289.2 1 1 CID 42.13 4.23 1.00 1 2 635.39185 1269.77641 -1.03 51.67 5608 5608 MS2 17/20 Linfeng_091611_rIgG_3.raw IPI:IPI00306723.3 1054 120.9 5.94 CCAAT/enhancer-binding protein zeta 3.70 2 2 31.22 0.00 23.49 3.70 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GAIDDLQQGELEAFIQNLNLAK IPI:IPI00306723.3 2 1 CID 133.34 6.93 1.00 1 3 800.75153 2400.24002 -0.26 52.38 5695 5695 MS2 37/84 Linfeng_091611_rIgG_3.raw High ALTVAHELLcNKPEEEK IPI:IPI00306723.3 1 1 CID C10(Carbamidomethyl) 65.37 4.58 1.00 1 3 661.00580 1981.00284 -1.59 27.97 2615 2615 MS2 22/64 Linfeng_091611_rIgG_3.raw IPI:IPI00328355.2 99 11.4 10.59 Conserved hypothetical protein 20.20 1 1 32.92 0.00 181.74 20.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GmGLSPSLccRNPEFVAAKK IPI:IPI00328355.2 1 1 CID "M2(Oxidation), C9(Carbamidomethyl), C10(Carbamidomethyl)" 1.00 4.29 1.00 1 3 746.70374 2238.09665 6.14 38.50 4453 4453 MS2 11/76 Linfeng_091811_SIN3A_2.raw IPI:IPI00328828.5 1312 147.7 5.12 Isoform 1 of AT-rich interactive domain-containing protein 4B 28.43 88 27 18.44 0.00 956.43 28.43 88 27 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HFAESETLDQLPLTNPEHFGTPVIGK IPI:IPI00328828.5 4 1 CID 137.73 8.95 1.00 1 3 959.81470 2877.42954 -4.29 38.11 4432 4432 MS2 36/100 Linfeng_091811_SIN3A_1.raw High HFAESETLDQLPLTNPEHFGTPVIGK IPI:IPI00328828.5 4 1 CID 122.32 8.23 1.00 1 3 959.81506 2877.43064 -3.90 38.14 4445 4445 MS2 35/100 Linfeng_091811_SIN3A_3.raw High HFAESETLDQLPLTNPEHFGTPVIGK IPI:IPI00328828.5 4 1 CID 133.88 7.32 1.00 1 3 959.81488 2877.43009 -4.10 38.05 4394 4394 MS2 34/100 Linfeng_091811_SIN3A_2.raw High NDLISKEEQNSSSLLEENK IPI:IPI00328828.5 6 1 CID 73.99 6.73 1.00 1 3 726.35468 2177.04947 -3.41 32.08 3610 3610 MS2 31/72 Linfeng_091811_SIN3A_2.raw High KPEDNENLDDKDDDTTRVDESLNIK IPI:IPI00328828.5 4 1 CID 136.00 6.10 1.00 1 4 730.33850 2918.33217 -6.07 27.03 2972 2972 MS2 38/144 Linfeng_091811_SIN3A_3.raw High KPEDNENLDDKDDDTTRVDESLNIK IPI:IPI00328828.5 4 1 CID 129.21 6.09 1.00 1 4 730.33722 2918.32705 -7.83 27.00 2959 2959 MS2 39/144 Linfeng_091811_SIN3A_1.raw High SANIEFQMALPEK IPI:IPI00328828.5 5 1 CID 78.08 5.93 1.00 1 3 493.24823 1477.73014 -3.71 36.31 4168 4168 MS2 28/48 Linfeng_091811_SIN3A_2.raw High TTGFYSGFSEVAEK IPI:IPI00328828.5 6 1 CID 58.46 5.90 1.00 1 3 508.23846 1522.70084 -3.44 34.13 3880 3880 MS2 29/52 Linfeng_091811_SIN3A_2.raw High WSFQMSDLENMTSAER IPI:IPI00328828.5 3 1 CID 123.26 5.84 1.00 1 2 966.41443 1931.82158 -2.45 43.08 5044 5044 MS2 22/30 Linfeng_091811_SIN3A_2.raw High QVYQDLGIPVLNSAAGYNVK IPI:IPI00328828.5 5 1 CID 104.58 5.81 1.00 1 2 1075.06433 2149.12139 -3.48 41.10 4790 4790 MS2 21/38 Linfeng_091811_SIN3A_2.raw High WSFQMSDLENmTSAER IPI:IPI00328828.5 3 1 CID M11(Oxidation) 94.44 5.75 1.00 1 3 649.94281 1947.81388 -3.78 39.00 4518 4518 MS2 30/60 Linfeng_091811_SIN3A_2.raw High LTDASWYTVVFDDGDEK IPI:IPI00328828.5 4 1 CID 108.53 5.72 1.00 1 2 980.94250 1960.87773 -1.75 43.57 5106 5106 MS2 13/32 Linfeng_091811_SIN3A_2.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 126.54 5.65 1.00 1 2 888.45239 1775.89751 -4.92 35.77 4136 4136 MS2 26/32 Linfeng_091811_SIN3A_3.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 127.70 5.63 1.00 1 2 888.45294 1775.89861 -4.30 36.08 3989 3989 MS2 24/32 Linfeng_091811_SIN3A_10.raw High WSFQMSDLENMTSAER IPI:IPI00328828.5 3 1 CID 90.28 5.51 1.00 1 3 644.61188 1931.82108 -2.71 43.11 5048 5048 MS2 31/60 Linfeng_091811_SIN3A_2.raw High KPEDNENLDDKDDDTTRVDESLNIK IPI:IPI00328828.5 4 1 CID 134.85 5.51 1.00 1 4 730.33966 2918.33681 -4.48 27.33 2968 2968 MS2 39/144 Linfeng_091811_SIN3A_2.raw High QQSSVTVSEPLAPNQEEVR IPI:IPI00328828.5 6 1 CID 114.74 5.48 1.00 1 2 1049.52100 2098.03472 -3.09 28.87 3178 3178 MS2 15/36 Linfeng_091811_SIN3A_2.raw High KPEDNENLDDKDDDTTR IPI:IPI00328828.5 4 1 CID 101.55 5.44 1.00 1 3 673.96106 2019.86863 -2.59 16.13 1450 1450 MS2 27/64 Linfeng_091811_SIN3A_1.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 132.68 5.38 1.00 1 2 888.45184 1775.89641 -5.54 35.89 4143 4143 MS2 26/32 Linfeng_091811_SIN3A_1.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 128.05 5.37 1.00 1 2 888.45251 1775.89775 -4.79 36.13 4092 4092 MS2 25/32 Linfeng_091811_SIN3A_9.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 74.26 5.37 1.00 1 3 537.25110 1609.73874 -4.08 18.76 1780 1780 MS2 31/52 Linfeng_091811_SIN3A_2.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 135.69 5.33 1.00 1 2 888.45154 1775.89580 -5.89 35.78 4096 4096 MS2 26/32 Linfeng_091811_SIN3A_2.raw High QVYQDLGIPVLNSAAGYNVK IPI:IPI00328828.5 5 1 CID 61.56 5.28 1.00 1 3 717.04700 2149.12644 -1.13 41.05 4820 4820 MS2 30/76 Linfeng_091811_SIN3A_3.raw High HDSSTVEVQDDHIKGPLK IPI:IPI00328828.5 4 1 CID 28.39 5.28 1.00 1 3 669.00183 2004.99094 -3.82 22.92 2352 2352 MS2 24/68 Linfeng_091811_SIN3A_2.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 146.12 5.28 1.00 1 2 888.45245 1775.89763 -4.85 36.07 3960 3960 MS2 25/32 Linfeng_091811_SIN3A_7.raw High ALDEPPYLTVGTDVSAK IPI:IPI00328828.5 4 1 CID 113.19 5.24 1.00 1 2 888.45361 1775.89995 -3.55 36.00 4187 4187 MS2 25/32 Linfeng_091811_SIN3A_4.raw High ALWFPALVVcPDcSDEIAVK IPI:IPI00328828.5 4 1 CID "C10(Carbamidomethyl), C13(Carbamidomethyl)" 98.17 5.23 1.00 1 2 1145.56458 2290.12187 -1.26 48.87 5776 5776 MS2 20/38 Linfeng_091811_SIN3A_2.raw High LGGFDNIESGAVWK IPI:IPI00328828.5 5 1 CID 40.50 5.14 1.00 1 3 498.25055 1492.73709 -4.06 38.17 4411 4411 MS2 28/52 Linfeng_091811_SIN3A_2.raw High QVYQDLGIPVLNSAAGYNVK IPI:IPI00328828.5 5 1 CID 40.07 5.11 1.00 1 3 717.04645 2149.12479 -1.90 40.91 4766 4766 MS2 29/76 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 64.00 5.09 1.00 1 3 537.25159 1609.74021 -3.17 17.72 1635 1635 MS2 28/52 Linfeng_091811_SIN3A_2.raw High WSFQmSDLENmTSAER IPI:IPI00328828.5 3 1 CID "M5(Oxidation), M11(Oxidation)" 109.92 5.09 1.00 1 2 982.40839 1963.80950 -3.39 33.87 3846 3846 MS2 22/30 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 83.43 5.08 1.00 1 3 537.25183 1609.74094 -2.72 19.77 1920 1920 MS2 29/52 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 83.76 5.02 1.00 1 3 537.25177 1609.74076 -2.83 18.86 1830 1830 MS2 27/52 Linfeng_091811_SIN3A_1.raw High ALWFPALVVcPDcSDEIAVK IPI:IPI00328828.5 4 1 CID "C10(Carbamidomethyl), C13(Carbamidomethyl)" 73.11 5.02 1.00 1 4 573.28540 2290.11977 -2.18 48.96 5785 5785 MS2 32/114 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 59.80 5.01 1.00 1 3 537.25159 1609.74021 -3.17 19.08 1794 1794 MS2 31/52 Linfeng_091811_SIN3A_9.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 66.19 5.01 1.00 1 2 717.86273 1434.71819 -2.93 29.06 3238 3238 MS2 20/24 Linfeng_091811_SIN3A_1.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 54.09 5.01 1.00 1 2 717.86176 1434.71623 -4.29 29.30 3195 3195 MS2 20/24 Linfeng_091811_SIN3A_9.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 40.75 4.99 1.00 1 3 478.91058 1434.71720 -3.62 29.12 3212 3212 MS2 27/48 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 81.21 4.98 1.00 1 3 537.25244 1609.74277 -1.58 18.91 1832 1832 MS2 30/52 Linfeng_091811_SIN3A_3.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 113.40 4.96 1.00 1 2 805.37396 1609.74065 -2.90 18.88 1796 1796 MS2 22/26 Linfeng_091811_SIN3A_2.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 30.21 4.95 1.00 1 3 478.91080 1434.71784 -3.17 29.17 3264 3264 MS2 26/48 Linfeng_091811_SIN3A_3.raw High LTDASWYTVVFDDGDEK IPI:IPI00328828.5 4 1 CID 97.65 4.94 1.00 1 3 654.29718 1960.87699 -2.13 43.36 5080 5080 MS2 32/64 Linfeng_091811_SIN3A_2.raw High QVYQDLGIPVLNSAAGYNVK IPI:IPI00328828.5 5 1 CID 52.84 4.92 1.00 1 3 717.04614 2149.12387 -2.33 41.15 4827 4827 MS2 29/76 Linfeng_091811_SIN3A_1.raw High KDVHEITSDTAPKPDAVLK IPI:IPI00328828.5 4 1 CID 42.53 4.91 1.00 1 4 516.77765 2064.08877 -4.12 24.47 2415 2415 MS2 34/108 Linfeng_091811_SIN3A_7.raw High KDVHEITSDTAPKPDAVLK IPI:IPI00328828.5 4 1 CID 45.77 4.86 1.00 1 4 516.77734 2064.08755 -4.71 24.17 2527 2527 MS2 36/108 Linfeng_091811_SIN3A_2.raw High VHADLVISKPVSK IPI:IPI00328828.5 6 1 CID 92.20 4.86 1.00 1 2 696.91150 1392.81572 -3.78 22.83 2340 2340 MS2 19/24 Linfeng_091811_SIN3A_2.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 45.29 4.85 1.00 1 2 717.86322 1434.71916 -2.25 29.32 3315 3315 MS2 20/24 Linfeng_091811_SIN3A_4.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 50.12 4.84 1.00 1 2 717.86133 1434.71538 -4.89 29.36 3147 3147 MS2 20/24 Linfeng_091811_SIN3A_8.raw High KNLLESIPTHSDQEK IPI:IPI00328828.5 4 1 CID 96.23 4.84 1.00 1 3 580.29999 1738.88541 -6.71 26.94 2914 2914 MS2 28/56 Linfeng_091811_SIN3A_2.raw High EEQNSSSLLEENK IPI:IPI00328828.5 6 1 CID 73.14 4.81 1.00 1 2 753.84735 1506.68743 -2.96 23.95 2540 2540 MS2 19/24 Linfeng_091811_SIN3A_3.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 69.20 4.80 1.00 1 2 717.86273 1434.71819 -2.93 29.11 3210 3210 MS2 20/24 Linfeng_091811_SIN3A_2.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 60.74 4.77 1.00 1 3 537.25189 1609.74112 -2.60 19.11 1882 1882 MS2 29/52 Linfeng_091811_SIN3A_6.raw High QQSSVTVSEPLAPNQEEVR IPI:IPI00328828.5 6 1 CID 65.19 4.73 1.00 1 3 700.01642 2098.03470 -3.09 28.84 3173 3173 MS2 29/72 Linfeng_091811_SIN3A_2.raw High TTGFYSGFSEVAEK IPI:IPI00328828.5 6 1 CID 57.88 4.70 1.00 1 2 761.85468 1522.70207 -2.63 34.27 3962 3962 MS2 20/26 Linfeng_091811_SIN3A_4.raw High EEQNSSSLLEENK IPI:IPI00328828.5 6 1 CID 69.28 4.69 1.00 1 2 753.84686 1506.68645 -3.61 23.79 2473 2473 MS2 17/24 Linfeng_091811_SIN3A_2.raw High SANIEFQmALPEK IPI:IPI00328828.5 5 1 CID M8(Oxidation) 94.38 4.67 1.00 1 2 747.36633 1493.72539 -3.45 31.30 3506 3506 MS2 20/24 Linfeng_091811_SIN3A_2.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 71.24 4.65 1.00 1 2 717.86292 1434.71855 -2.67 29.27 3067 3067 MS2 20/24 Linfeng_091811_SIN3A_7.raw High QQSSVTVSEPLAPNQEEVR IPI:IPI00328828.5 6 1 CID 6.82 4.65 1.00 1 3 700.01678 2098.03580 -2.57 28.84 3219 3219 MS2 21/72 Linfeng_091811_SIN3A_3.raw High NLLESIPTHSDQEK IPI:IPI00328828.5 4 1 CID 75.86 4.64 1.00 1 2 805.90210 1610.79692 -3.21 29.43 3252 3252 MS2 19/26 Linfeng_091811_SIN3A_2.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 65.22 4.64 1.00 1 2 717.86261 1434.71794 -3.10 29.34 3300 3300 MS2 20/24 Linfeng_091811_SIN3A_6.raw High RLSKPPFQTNPSPEmVSK IPI:IPI00328828.5 5 1 CID M15(Oxidation) 66.85 4.61 1.00 1 3 687.02332 2059.05539 -4.27 23.25 2398 2398 MS2 26/68 Linfeng_091811_SIN3A_2.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 60.51 4.61 1.00 1 2 717.86316 1434.71904 -2.33 29.09 3254 3254 MS2 20/24 Linfeng_091811_SIN3A_3.raw High QQSSVTVSEPLAPNQEEVR IPI:IPI00328828.5 6 1 CID 20.81 4.60 1.00 1 3 700.01666 2098.03543 -2.74 28.69 3188 3188 MS2 25/72 Linfeng_091811_SIN3A_1.raw High LTDASWYTVVFDDGDEK IPI:IPI00328828.5 4 1 CID 100.78 4.59 1.00 1 3 654.29718 1960.87699 -2.13 43.71 5159 5159 MS2 36/64 Linfeng_091811_SIN3A_3.raw High TTGFYSGFSEVAEK IPI:IPI00328828.5 6 1 CID 65.86 4.57 1.00 1 2 761.85437 1522.70146 -3.03 34.09 3875 3875 MS2 21/26 Linfeng_091811_SIN3A_2.raw High WSFQmSDLENMTSAER IPI:IPI00328828.5 3 1 CID M5(Oxidation) 101.50 4.56 1.00 1 2 974.41095 1947.81462 -3.40 38.02 4391 4391 MS2 21/30 Linfeng_091811_SIN3A_2.raw High TTGFYSGFSEVAEK IPI:IPI00328828.5 6 1 CID 57.42 4.55 1.00 1 2 761.85638 1522.70549 -0.38 34.00 3904 3904 MS2 18/26 Linfeng_091811_SIN3A_3.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 52.30 4.53 1.00 1 3 537.25232 1609.74240 -1.81 18.29 1566 1566 MS2 27/52 Linfeng_091811_SIN3A_10.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 90.95 4.53 1.00 1 3 537.25195 1609.74131 -2.49 18.53 1660 1660 MS2 30/52 Linfeng_091811_SIN3A_8.raw High KYLYGFEEYcR IPI:IPI00296069.2;IPI:IPI00328828.5 10 2 CID C10(Carbamidomethyl) 64.70 4.51 1.00 1 3 509.90103 1527.68854 -3.38 31.39 3517 3517 MS2 25/40 Linfeng_091811_SIN3A_2.raw High TTGFYSGFSEVAEK IPI:IPI00328828.5 6 1 CID 64.22 4.51 1.00 1 2 761.85425 1522.70122 -3.19 34.05 3901 3901 MS2 21/26 Linfeng_091811_SIN3A_1.raw High EEQNSSSLLEENK IPI:IPI00328828.5 6 1 CID 71.44 4.49 1.00 1 2 753.84735 1506.68743 -2.96 23.69 2509 2509 MS2 18/24 Linfeng_091811_SIN3A_1.raw High ALWFPALVVcPDcSDEIAVK IPI:IPI00328828.5 4 1 CID "C10(Carbamidomethyl), C13(Carbamidomethyl)" 68.98 4.49 1.00 1 3 764.04523 2290.12113 -1.59 48.85 5799 5799 MS2 27/76 Linfeng_091811_SIN3A_1.raw High WSFQmSDLENMTSAER IPI:IPI00328828.5 3 1 CID M5(Oxidation) 41.34 4.48 1.00 1 3 649.94293 1947.81424 -3.59 38.03 4392 4392 MS2 27/60 Linfeng_091811_SIN3A_2.raw High LSKPPFQTNPSPEMVSK IPI:IPI00328828.5 5 1 CID 29.59 4.46 1.00 1 3 629.65918 1886.96299 -2.74 28.03 3108 3108 MS2 26/64 Linfeng_091811_SIN3A_3.raw High SANIEFQmALPEK IPI:IPI00328828.5 5 1 CID M8(Oxidation) 94.64 4.45 1.00 1 2 747.36700 1493.72673 -2.55 31.22 3540 3540 MS2 19/24 Linfeng_091811_SIN3A_3.raw High HDSSTVEVQDDHIK IPI:IPI00328828.5 4 1 CID 89.47 4.45 1.00 1 3 537.25189 1609.74112 -2.60 18.65 1605 1605 MS2 30/52 Linfeng_091811_SIN3A_7.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 65.38 4.44 1.00 1 2 717.86218 1434.71709 -3.70 29.38 3107 3107 MS2 20/24 Linfeng_091811_SIN3A_10.raw High KDVHEITSDTAPKPDAVLK IPI:IPI00328828.5 4 1 CID 60.47 4.43 1.00 1 4 516.77844 2064.09194 -2.58 24.22 2583 2583 MS2 33/108 Linfeng_091811_SIN3A_1.raw High QQSSVTVSEPLAPNQEEVR IPI:IPI00328828.5 6 1 CID 6.69 4.43 1.00 1 3 700.01654 2098.03507 -2.92 28.99 3270 3270 MS2 24/72 Linfeng_091811_SIN3A_4.raw High NLLESIPTHSDQEK IPI:IPI00328828.5 4 1 CID 37.41 4.39 1.00 1 2 805.90314 1610.79900 -1.93 29.46 3304 3304 MS2 18/26 Linfeng_091811_SIN3A_3.raw High DSDVEGGEVLYLVHYcGWNVR IPI:IPI00328828.5 3 1 CID C16(Carbamidomethyl) 79.62 4.34 1.00 1 3 823.04858 2467.13120 -1.45 43.74 5185 5185 MS2 32/80 Linfeng_091811_SIN3A_4.raw High LTDASWYTVVFDDGDEK IPI:IPI00328828.5 4 1 CID 72.90 4.30 1.00 1 3 654.29736 1960.87754 -1.85 43.83 5197 5197 MS2 34/64 Linfeng_091811_SIN3A_4.raw High NLDGAYQEAVINK IPI:IPI00328828.5 4 1 CID 20.56 4.30 1.00 1 3 478.91049 1434.71692 -3.81 29.10 3244 3244 MS2 25/48 Linfeng_091811_SIN3A_1.raw High VKEENETEIKEIK IPI:IPI00328828.5 5 1 CID 49.80 4.29 1.00 1 3 530.28375 1588.83670 -3.91 19.48 1879 1879 MS2 25/48 Linfeng_091811_SIN3A_2.raw High ALWFPALVVcPDcSDEIAVK IPI:IPI00328828.5 4 1 CID "C10(Carbamidomethyl), C13(Carbamidomethyl)" 94.48 4.15 1.00 1 2 1145.56396 2290.12065 -1.79 48.98 5815 5815 MS2 17/38 Linfeng_091811_SIN3A_1.raw High SANIEFQmALPEK IPI:IPI00328828.5 5 1 CID M8(Oxidation) 59.33 4.14 1.00 1 2 747.36615 1493.72502 -3.69 31.30 3538 3538 MS2 19/24 Linfeng_091811_SIN3A_1.raw High DVWSSIQGQWPK IPI:IPI00328828.5 6 1 CID 66.73 4.09 1.00 1 2 715.85559 1430.70391 -1.71 41.81 4917 4917 MS2 17/22 Linfeng_091811_SIN3A_3.raw IPI:IPI00375330.6 1190 132.9 5.44 Isoform 1 of Wings apart-like protein homolog 1.51 1 1 19.60 0.00 13.34 1.51 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IGGQVHAVQALVQLFLER IPI:IPI00375330.6 3 1 CID 43.33 4.32 1.00 1 3 660.04694 1978.12625 1.47 52.10 6179 6179 MS2 24/68 Linfeng_091811_SIN3A_2.raw IPI:IPI00385592.1 210 23.7 8.43 Isoform 3 of Inhibitor of growth protein 1 24.29 16 3 5.14 0.00 121.17 24.29 16 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QVDSHVELFEAQQELGDTAGNSGK IPI:IPI00385592.1 5 1 CID 119.86 8.94 1.00 1 3 853.73462 2559.18930 -2.57 34.08 3704 3704 MS2 32/92 Linfeng_091811_SIN3A_7.raw High QVDSHVELFEAQQELGDTAGNSGK IPI:IPI00385592.1 5 1 CID 95.40 7.20 1.00 1 3 853.73395 2559.18729 -3.36 34.07 3923 3923 MS2 27/92 Linfeng_091811_SIN3A_6.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 71.75 6.50 1.00 1 3 553.30255 1657.89310 -0.69 46.91 5558 5558 MS2 28/52 Linfeng_091811_SIN3A_6.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 76.46 6.42 1.00 1 3 553.30182 1657.89090 -2.02 47.08 5361 5361 MS2 30/52 Linfeng_091811_SIN3A_7.raw High IQIVSQmVELVENR IPI:IPI00385592.1 5 1 CID M7(Oxidation) 74.86 6.16 1.00 1 3 558.63312 1673.88480 -2.61 34.69 3781 3781 MS2 29/52 Linfeng_091811_SIN3A_7.raw High IQIVSQmVELVENR IPI:IPI00385592.1 5 1 CID M7(Oxidation) 74.48 6.03 1.00 1 3 558.63257 1673.88315 -3.59 34.57 3989 3989 MS2 29/52 Linfeng_091811_SIN3A_6.raw High IQIVSQmVELVENR IPI:IPI00385592.1 5 1 CID M7(Oxidation) 86.30 6.01 1.00 1 2 837.44543 1673.88359 -3.33 34.58 3990 3990 MS2 23/26 Linfeng_091811_SIN3A_6.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 89.28 5.90 1.00 1 2 829.44958 1657.89189 -1.42 47.14 5369 5369 MS2 23/26 Linfeng_091811_SIN3A_7.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 81.61 5.66 1.00 1 3 553.30188 1657.89109 -1.91 47.08 5389 5389 MS2 29/52 Linfeng_091811_SIN3A_10.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 54.54 5.51 1.00 1 3 553.30188 1657.89109 -1.91 47.27 5446 5446 MS2 29/52 Linfeng_091811_SIN3A_8.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 106.57 5.51 1.00 1 2 829.44922 1657.89116 -1.86 46.97 5565 5565 MS2 23/26 Linfeng_091811_SIN3A_6.raw High IQIVSQmVELVENR IPI:IPI00385592.1 5 1 CID M7(Oxidation) 78.78 5.50 1.00 1 2 837.44562 1673.88396 -3.11 34.70 3783 3783 MS2 22/26 Linfeng_091811_SIN3A_7.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 90.24 5.45 1.00 1 3 553.30176 1657.89072 -2.13 47.18 5489 5489 MS2 28/52 Linfeng_091811_SIN3A_9.raw High QVDSHVELFEAQQELGDTAGNSGK IPI:IPI00385592.1 5 1 CID 8.89 5.01 1.00 1 3 853.73413 2559.18784 -3.14 34.27 3851 3851 MS2 24/92 Linfeng_091811_SIN3A_9.raw High IQIVSQMVELVENR IPI:IPI00385592.1 5 1 CID 77.48 5.01 1.00 1 3 553.30200 1657.89145 -1.69 47.98 5691 5691 MS2 25/52 Linfeng_091811_SIN3A_6.raw High GEAAAQADKPNSK IPI:IPI00385592.1 6 1 CID 75.83 4.69 1.00 1 2 643.82050 1286.63371 0.10 1.92 166 166 MS2 20/24 Linfeng_091811_SIN3A_6.raw IPI:IPI00395865.4 425 47.8 5.05 Histone-binding protein RBBP7 57.65 26 10 13.47 0.00 375.71 57.65 26 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LHTFESHKDEIFQVHWSPHNETILASSGTDR IPI:IPI00395865.4 5 1 CID 107.85 8.21 1.00 1 4 905.43719 3618.72695 -2.55 32.88 3898 3898 MS2 37/180 Linfeng_091811_SIN3A_5.raw High IGEEQSAEDAEDGPPELLFIHGGHTAK IPI:IPI00395865.4 5 1 CID 300.00 7.06 1.00 1 3 949.78204 2847.33158 -4.12 34.94 4170 4170 MS2 33/104 Linfeng_091811_SIN3A_5.raw High AIFTGHSAVVEDVAWHLLHESLFGSVADDQK IPI:IPI00395865.4 6 1 CID 96.09 6.51 1.00 1 4 845.42493 3378.67788 0.71 50.41 5991 5991 MS2 37/180 Linfeng_091811_SIN3A_6.raw High EGYGLSWNSNLSGHLLSASDDHTVcLWDINAGPK IPI:IPI00395865.4 4 1 CID C25(Carbamidomethyl) 115.48 5.71 1.00 1 4 929.18317 3713.71084 -4.90 43.58 5320 5320 MS2 41/198 Linfeng_091811_SIN3A_5.raw High AIFTGHSAVVEDVAWHLLHESLFGSVADDQK IPI:IPI00395865.4 6 1 CID 140.62 5.64 1.00 1 4 845.42572 3378.68105 1.65 50.05 6142 6142 MS2 35/180 Linfeng_091811_SIN3A_5.raw High EGYGLSWNSNLSGHLLSASDDHTVcLWDINAGPK IPI:IPI00395865.4 4 1 CID C25(Carbamidomethyl) 96.38 5.58 1.00 1 4 929.18536 3713.71963 -2.54 43.62 5148 5148 MS2 38/198 Linfeng_091811_SIN3A_6.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 93.87 5.28 1.00 1 2 736.36725 1471.72722 -2.94 36.84 4059 4059 MS2 21/24 Linfeng_091811_SIN3A_7.raw High SNTTSKPSHLVDAHTAEVNcLSFNPYSEFILATGSADK IPI:IPI00395865.4 6 1 CID C20(Carbamidomethyl) 83.72 5.26 1.00 1 5 822.59509 4108.94636 -2.30 40.60 4765 4765 MS2 47/296 Linfeng_091811_SIN3A_6.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 104.29 5.20 1.00 1 2 736.36719 1471.72710 -3.03 36.93 4137 4137 MS2 19/24 Linfeng_091811_SIN3A_8.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 109.64 5.17 1.00 1 3 597.27863 1789.82132 -4.12 18.05 1845 1845 MS2 27/60 Linfeng_091811_SIN3A_5.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 102.16 5.15 1.00 1 2 736.36743 1471.72759 -2.69 36.79 4273 4273 MS2 20/24 Linfeng_091811_SIN3A_6.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 95.06 5.14 1.00 1 2 736.36755 1471.72783 -2.53 36.93 4197 4197 MS2 20/24 Linfeng_091811_SIN3A_9.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 91.30 5.08 1.00 1 2 736.36652 1471.72576 -3.94 36.58 4392 4392 MS2 19/24 Linfeng_091811_SIN3A_5.raw High DYALHWLVLGTHTSDEQNHLVVAR IPI:IPI00395865.4 5 1 CID 152.56 4.99 1.00 1 4 694.35315 2774.39077 -3.68 38.73 4679 4679 MS2 38/138 Linfeng_091811_SIN3A_5.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 83.82 4.94 1.00 1 3 597.27979 1789.82480 -2.18 18.04 1730 1730 MS2 28/60 Linfeng_091811_SIN3A_6.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 106.33 4.93 1.00 1 3 597.27802 1789.81949 -5.14 1.93 280 280 MS2 26/60 Linfeng_091811_SIN3A_8.raw High AIFTGHSAVVEDVAWHLLHESLFGSVADDQK IPI:IPI00395865.4 6 1 CID 300.00 4.70 1.00 1 4 845.41699 3378.64614 -8.68 50.11 6150 6150 MS2 37/180 Linfeng_091811_SIN3A_5.raw High VHIPNDDAQFDASHcDSDK IPI:IPI00395865.4 5 1 CID C15(Carbamidomethyl) 101.84 4.67 1.00 1 4 543.48004 2170.89834 -5.15 24.66 2774 2774 MS2 38/108 Linfeng_091811_SIN3A_5.raw High SNTTSKPSHLVDAHTAEVNcLSFNPYSEFILATGSADK IPI:IPI00395865.4 6 1 CID C20(Carbamidomethyl) 114.48 4.44 1.00 1 4 1027.99109 4108.94253 -3.23 40.35 4895 4895 MS2 40/222 Linfeng_091811_SIN3A_5.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 104.29 4.35 1.00 1 3 597.27795 1789.81931 -5.24 19.67 2077 2077 MS2 28/60 Linfeng_091811_SIN3A_5.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 78.97 4.34 1.00 1 3 597.28021 1789.82608 -1.46 18.18 1727 1727 MS2 22/60 Linfeng_091811_SIN3A_3.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 57.61 4.33 1.00 1 3 597.27917 1789.82297 -3.20 18.08 1720 1720 MS2 23/60 Linfeng_091811_SIN3A_1.raw High IGEEQSAEDAEDGPPELLFIHGGHTAK IPI:IPI00395865.4 5 1 CID 16.76 4.33 1.00 1 5 570.27191 2847.33045 -4.51 35.05 4185 4185 MS2 48/208 Linfeng_091811_SIN3A_5.raw High IGEEQSAEDAEDGPPELLFIHGGHTAK IPI:IPI00395865.4 5 1 CID 77.92 4.31 1.00 1 4 712.58850 2847.33217 -3.91 35.04 4048 4048 MS2 31/156 Linfeng_091811_SIN3A_6.raw High HPAKPDPSGEcNPDLR IPI:IPI00395865.4 4 1 CID C11(Carbamidomethyl) 79.72 4.27 1.00 1 3 597.27966 1789.82444 -2.38 18.33 1777 1777 MS2 23/60 Linfeng_091811_SIN3A_4.raw High GEFGGFGSVTGK IPI:IPI00395865.4 3 1 CID 77.38 4.13 1.00 1 2 571.77466 1142.54204 -4.98 31.61 3729 3729 MS2 19/22 Linfeng_091811_SIN3A_5.raw IPI:IPI00398020.7 2699 300.8 6.42 Teneurin-3 0.78 8 1 38.44 0.00 109.04 0.78 8 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 3.35 4.97 1.00 1 3 747.37628 2240.11429 5.61 36.74 4047 4047 MS2 17/80 Linfeng_091811_SIN3A_7.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.59 1.00 1 3 747.37567 2240.11246 4.79 36.75 4173 4173 MS2 17/80 Linfeng_091811_SIN3A_9.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.58 1.00 1 3 747.37592 2240.11319 5.12 36.69 4260 4260 MS2 19/80 Linfeng_091811_SIN3A_6.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.55 1.00 1 3 747.37604 2240.11356 5.28 36.72 4072 4072 MS2 18/80 Linfeng_091811_SIN3A_10.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.55 1.00 1 3 747.37592 2240.11319 5.12 36.75 4284 4284 MS2 19/80 Linfeng_091811_SIN3A_4.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.50 1.00 1 3 747.37708 2240.11667 6.67 36.42 4212 4212 MS2 20/80 Linfeng_091811_SIN3A_1.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 7.65 4.41 1.00 1 3 747.37622 2240.11411 5.53 36.75 4113 4113 MS2 17/80 Linfeng_091811_SIN3A_8.raw High QDGMFDLVANGGASLTLVFER IPI:IPI00398020.7 1 1 CID 1.00 4.39 1.00 1 3 747.37634 2240.11448 5.69 36.50 4234 4234 MS2 16/80 Linfeng_091811_SIN3A_3.raw IPI:IPI00438230.3 753 79.4 5.99 Isoform 2 of Transcription intermediary factor 1-beta 4.65 2 2 10.17 0.00 16.13 4.65 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LDLDLTADSQPPVFK IPI:IPI00438230.3 2 1 CID 49.44 5.40 1.00 1 2 829.93390 1658.86052 -1.89 39.65 4638 4638 MS2 20/28 Linfeng_091811_SIN3A_3.raw High IVAERPGTNSTGPAPmAPPR IPI:IPI00438230.3 2 1 CID M16(Oxidation) 45.53 4.49 1.00 1 3 679.01575 2035.03269 -3.13 21.83 2242 2242 MS2 30/76 Linfeng_091811_SIN3A_3.raw IPI:IPI00477295.4 1155 129.4 8.53 Isoform 3 of Putative ATP-dependent RNA helicase DHX30 1.56 2 1 41.42 0.00 26.83 1.56 1 1 21.31 1.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AVDEAVILLQEIGVLDQR 4 0 CID 96.35 6.07 1.00 1 3 661.03699 1981.09641 -0.07 53.13 6294 6294 MS2 34/68 Linfeng_091811_SIN3A_2.raw High AVDEAVILLQEIGVLDQR IPI:IPI00477295.4 4 1 CID 104.49 5.54 1.00 1 3 661.03760 1981.09824 0.86 52.89 5755 5755 MS2 33/68 Linfeng_091611_rIgG_3.raw IPI:IPI00478188.4 732 82.9 7.09 Isoform 1 of Interleukin-31 receptor subunit alpha 2.05 1 1 21.15 0.00 11.09 2.05 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MmWTWALWMLPSLcK IPI:IPI00478188.4 1 1 CID "M2(Oxidation), C14(Carbamidomethyl)" 14.11 4.43 1.00 1 3 657.31720 1969.93705 8.83 38.90 4393 4393 MS2 21/56 Linfeng_091811_SIN3A_8.raw IPI:IPI00478530.1 513 56.6 9.04 "Kinesin family member 12, isoform CRA_c" 3.70 18 1 10.65 0.00 61.66 3.70 10 1 55.02 3.70 8 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 5.57 4.82 1.00 1 2 961.96490 1922.92253 -2.72 46.05 5477 5477 MS2 4/36 Linfeng_091611_rIgG_6.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 1.23 4.56 1.00 1 2 961.96368 1922.92009 -3.99 46.00 5484 5484 MS2 5/36 Linfeng_091611_rIgG_5.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 6.53 4.55 1.00 1 2 961.96301 1922.91875 -4.69 46.23 5657 5657 MS2 7/36 Linfeng_091811_SIN3A_5.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 19.00 4.53 1.00 1 2 961.96454 1922.92180 -3.10 46.12 5462 5462 MS2 5/36 Linfeng_091811_SIN3A_3.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 6.02 4.48 1.00 1 2 961.96368 1922.92009 -3.99 46.03 5067 5067 MS2 5/36 Linfeng_091611_rIgG_10.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 12.30 4.48 1.00 1 2 961.96307 1922.91887 -4.62 45.93 4898 4898 MS2 5/36 Linfeng_091611_rIgG_3.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 3.93 4.46 1.00 1 2 961.96393 1922.92058 -3.73 46.33 5486 5486 MS2 5/36 Linfeng_091811_SIN3A_6.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 7.32 4.44 1.00 1 2 961.96399 1922.92070 -3.67 46.36 5386 5386 MS2 6/36 Linfeng_091811_SIN3A_9.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 6.82 4.37 1.00 1 2 961.96393 1922.92058 -3.73 45.95 5525 5525 MS2 6/36 Linfeng_091611_rIgG_4.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 10.16 4.35 1.00 1 2 961.96356 1922.91985 -4.12 46.16 5462 5462 MS2 5/36 Linfeng_091811_SIN3A_1.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 1.00 4.34 1.00 1 2 961.96338 1922.91948 -4.31 45.95 5338 5338 MS2 7/36 Linfeng_091611_rIgG_1.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 19.49 4.27 1.00 1 2 961.96405 1922.92082 -3.61 46.21 5505 5505 MS2 5/36 Linfeng_091811_SIN3A_4.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 5.44 4.21 1.00 1 2 961.96307 1922.91887 -4.62 46.29 5451 5451 MS2 4/36 Linfeng_091811_SIN3A_2.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 17.15 4.18 1.00 1 2 961.96509 1922.92290 -2.53 45.98 5307 5307 MS2 5/36 Linfeng_091611_rIgG_2.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 5.50 4.17 1.00 1 2 961.96490 1922.92253 -2.72 45.94 5292 5292 MS2 5/36 Linfeng_091611_rIgG_9.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 1.00 4.14 1.00 1 2 961.96478 1922.92229 -2.85 45.91 5603 5603 MS2 6/36 Linfeng_091611_rIgG_8.raw High QTAQQMPSVDPGEPPVGGK 2 0 CID 1.69 4.13 1.00 1 2 961.96387 1922.92046 -3.80 46.37 5273 5273 MS2 8/36 Linfeng_091811_SIN3A_7.raw High QTAQQMPSVDPGEPPVGGK IPI:IPI00478530.1 2 1 CID 8.82 4.11 1.00 1 2 961.96478 1922.92229 -2.85 45.98 5389 5389 MS2 5/36 Linfeng_091611_rIgG_7.raw IPI:IPI00514333.1 149 16.8 4.25 "Acidic (Leucine-rich) nuclear phosphoprotein 32 family, member E" 12.75 1 1 3.49 0.00 7.26 12.75 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KLELSDNIISGGLEVLAEK IPI:IPI00514333.1 4 1 CID 63.33 5.51 1.00 1 3 676.71112 2028.11881 -1.78 44.17 5161 5161 MS2 28/72 Linfeng_091611_rIgG_7.raw IPI:IPI00514399.1 66 7.4 7.24 Ribosomal protein S27 19.70 1 1 6.02 0.00 4.75 19.70 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVQSPNSYFmDVK IPI:IPI00514399.1 6 1 CID M10(Oxidation) 111.23 4.75 1.00 1 2 772.37402 1543.74077 -3.50 32.61 3543 3543 MS2 18/24 Linfeng_091811_SIN3A_10.raw IPI:IPI00515017.4 576 67.0 7.58 "cDNA FLJ59435, highly similar to Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA" 13.02 5 5 36.07 0.00 115.86 13.02 5 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KEELEEVAHELAETEHENTVLR IPI:IPI00515017.4 10 1 CID 79.96 6.19 1.00 1 4 652.07306 2605.27041 -1.43 36.62 4249 4249 MS2 38/126 Linfeng_091811_SIN3A_3.raw High VTDLVNQQQTLEEK IPI:IPI00515017.4 8 1 CID 80.54 5.25 1.00 1 2 822.92102 1644.83476 -5.60 27.23 3001 3001 MS2 21/26 Linfeng_091811_SIN3A_3.raw High TRLEADEVAAQLER IPI:IPI00515017.4 8 1 CID 48.78 5.21 1.00 1 3 534.27979 1600.82480 -2.63 30.95 3505 3505 MS2 30/52 Linfeng_091811_SIN3A_3.raw High LAEcQDQLQGYER IPI:IPI00515017.4 8 1 CID C4(Carbamidomethyl) 90.13 5.00 1.00 1 2 805.36377 1609.72026 -4.53 26.40 2884 2884 MS2 19/24 Linfeng_091811_SIN3A_3.raw High NIDLTAIISDLR IPI:IPI00515017.4 8 1 CID 67.80 4.79 1.00 1 2 672.37946 1343.75163 -0.99 49.59 5895 5895 MS2 19/22 Linfeng_091811_SIN3A_3.raw IPI:IPI00607645.5 328 38.1 5.66 Sin3 histone deacetylase corepressor complex component SDS3 29.57 38 8 37.61 0.00 424.85 29.57 38 8 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KPAPAQLNYLLTDEQImEDLR IPI:IPI00607645.5 1 1 CID M17(Oxidation) 57.17 7.18 1.00 1 3 825.42206 2474.25162 -3.25 39.61 4540 4540 MS2 31/80 Linfeng_091811_SIN3A_9.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 86.09 6.98 1.00 1 3 606.97675 1818.91568 -4.19 41.11 4997 4997 MS2 35/56 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 93.22 6.82 1.00 1 3 606.97772 1818.91861 -2.58 41.13 4833 4833 MS2 34/56 Linfeng_091811_SIN3A_6.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 87.87 6.51 1.00 1 2 909.96320 1818.91911 -2.30 41.16 4617 4617 MS2 23/28 Linfeng_091811_SIN3A_7.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 101.84 6.36 1.00 1 2 909.96252 1818.91777 -3.04 41.23 4745 4745 MS2 23/28 Linfeng_091811_SIN3A_9.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 93.69 6.33 1.00 1 2 909.96191 1818.91655 -3.71 41.25 4695 4695 MS2 22/28 Linfeng_091811_SIN3A_8.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 84.90 6.31 1.00 1 3 606.97729 1818.91733 -3.28 41.29 4700 4700 MS2 32/56 Linfeng_091811_SIN3A_8.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 93.09 6.26 1.00 1 2 909.96259 1818.91789 -2.97 41.11 4831 4831 MS2 23/28 Linfeng_091811_SIN3A_6.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 81.08 6.25 1.00 1 2 909.96539 1818.92351 0.11 56.41 6890 6890 MS2 23/28 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 82.31 6.19 1.00 1 2 909.96155 1818.91582 -4.11 41.04 4987 4987 MS2 23/28 Linfeng_091811_SIN3A_5.raw High RKPAPAQLNYLLTDEQImEDLR IPI:IPI00607645.5 1 1 CID M18(Oxidation) 96.45 6.11 1.00 1 4 658.34296 2630.35000 -4.10 36.68 4406 4406 MS2 45/126 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 78.24 6.08 1.00 1 3 606.97784 1818.91898 -2.38 41.24 4746 4746 MS2 34/56 Linfeng_091811_SIN3A_9.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 80.28 6.03 1.00 1 2 909.96393 1818.92058 -1.50 42.11 5128 5128 MS2 22/28 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 94.08 5.99 1.00 1 2 909.96411 1818.92095 -1.29 57.66 7005 7005 MS2 23/28 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 74.52 5.98 1.00 1 2 909.96399 1818.92070 -1.43 58.69 7104 7104 MS2 22/28 Linfeng_091811_SIN3A_5.raw High LScVISSVGANEIWVR IPI:IPI00607645.5 2 1 CID C3(Carbamidomethyl) 96.82 5.88 1.00 1 3 597.31134 1789.91947 -3.99 39.11 4731 4731 MS2 35/60 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 92.80 5.88 1.00 1 2 909.96130 1818.91533 -4.38 59.87 7215 7215 MS2 21/28 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 110.02 5.80 1.00 1 3 606.97748 1818.91788 -2.98 41.29 4633 4633 MS2 37/56 Linfeng_091811_SIN3A_7.raw High RKPAPAQLNYLLTDEQImEDLR IPI:IPI00607645.5 1 1 CID M18(Oxidation) 88.80 5.79 1.00 1 4 658.34320 2630.35097 -3.73 36.89 4286 4286 MS2 42/126 Linfeng_091811_SIN3A_6.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 82.21 5.77 1.00 1 2 909.96515 1818.92302 -0.15 54.96 6732 6732 MS2 21/28 Linfeng_091811_SIN3A_5.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 93.03 5.72 1.00 1 2 917.46887 1833.93047 -2.02 30.31 3431 3431 MS2 20/28 Linfeng_091811_SIN3A_6.raw High RQLQQLQEGTLQEYQK IPI:IPI00607645.5 1 1 CID 47.57 5.58 1.00 1 3 664.01239 1990.02262 -6.37 27.22 3130 3130 MS2 29/60 Linfeng_091811_SIN3A_5.raw High RKPAPAQLNYLLTDEQImEDLR IPI:IPI00607645.5 1 1 CID M18(Oxidation) 82.13 5.50 1.00 1 4 658.34375 2630.35317 -2.90 36.96 4201 4201 MS2 40/126 Linfeng_091811_SIN3A_9.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 107.33 5.38 1.00 1 2 917.46796 1833.92864 -3.02 30.18 3532 3532 MS2 21/28 Linfeng_091811_SIN3A_5.raw High KPAPAQLNYLLTDEQIMEDLR IPI:IPI00607645.5 1 1 CID 97.71 5.33 1.00 1 3 820.09052 2458.25699 -3.16 43.54 5315 5315 MS2 31/80 Linfeng_091811_SIN3A_5.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 38.40 5.29 1.00 1 3 611.98071 1833.92759 -3.59 30.28 3427 3427 MS2 29/56 Linfeng_091811_SIN3A_6.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 27.32 5.13 1.00 1 3 611.98010 1833.92575 -4.59 30.39 3285 3285 MS2 31/56 Linfeng_091811_SIN3A_8.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 78.99 5.01 1.00 1 2 917.46832 1833.92937 -2.62 30.49 3298 3298 MS2 19/28 Linfeng_091811_SIN3A_8.raw High QLQQLQEGTLQEYQK IPI:IPI00607645.5 2 1 CID 34.88 4.99 1.00 1 3 611.98022 1833.92612 -4.39 30.16 3529 3529 MS2 25/56 Linfeng_091811_SIN3A_5.raw High LTmELTGDSMEVKPIMTR IPI:IPI00607645.5 2 1 CID M3(Oxidation) 81.20 4.99 1.00 1 3 690.00610 2068.00376 -4.20 32.26 3817 3817 MS2 29/68 Linfeng_091811_SIN3A_5.raw High LScVISSVGANEIWVR IPI:IPI00607645.5 2 1 CID C3(Carbamidomethyl) 84.62 4.80 1.00 1 2 895.46344 1789.91960 -3.92 39.11 4730 4730 MS2 23/30 Linfeng_091811_SIN3A_5.raw High RKPAPAQLNYLLTDEQIMEDLR IPI:IPI00607645.5 1 1 CID 107.02 4.54 1.00 1 4 654.34515 2614.35879 -2.71 40.60 4928 4928 MS2 40/126 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 14.64 4.37 1.00 1 3 606.97803 1818.91953 -2.07 59.38 7171 7171 MS2 24/56 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 16.11 4.32 1.00 1 3 606.97906 1818.92264 -0.36 58.23 7057 7057 MS2 25/56 Linfeng_091811_SIN3A_5.raw High LTmELTGDSmEVKPIMTR IPI:IPI00607645.5 2 1 CID "M3(Oxidation), M10(Oxidation)" 78.80 4.30 1.00 1 3 695.33820 2084.00003 -3.51 29.26 3408 3408 MS2 22/68 Linfeng_091811_SIN3A_5.raw High NAELFLQLETEQVER IPI:IPI00607645.5 1 1 CID 29.66 4.30 1.00 1 3 606.98059 1818.92722 2.15 57.17 6959 6959 MS2 27/56 Linfeng_091811_SIN3A_5.raw High HDEEDYVEMK IPI:IPI00607645.5 2 1 CID 69.62 4.19 1.00 1 2 647.76428 1294.52129 -3.38 23.88 2554 2554 MS2 16/18 Linfeng_091811_SIN3A_6.raw High HDEEDYVEMK IPI:IPI00607645.5 2 1 CID 66.89 4.08 1.00 1 2 647.76294 1294.51860 -5.45 23.61 2629 2629 MS2 16/18 Linfeng_091811_SIN3A_5.raw IPI:IPI00639887.3 262 29.1 9.00 "cDNA FLJ55197, highly similar to Protein FAM60A" 15.65 8 3 7.75 0.00 82.04 15.65 8 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGDIcNAcVLLVK IPI:IPI00639887.3 2 1 CID "C5(Carbamidomethyl), C8(Carbamidomethyl)" 31.89 6.00 1.00 1 3 483.57684 1448.71598 -5.31 34.01 3695 3695 MS2 32/48 Linfeng_091811_SIN3A_7.raw High TPVFSFLDLTYWK IPI:IPI00639887.3 3 1 CID 92.04 5.34 1.00 1 2 808.92255 1616.83782 1.15 52.22 5987 5987 MS2 20/24 Linfeng_091811_SIN3A_7.raw High TPVFSFLDLTYWK IPI:IPI00639887.3 3 1 CID 85.57 5.18 1.00 1 2 808.92175 1616.83623 0.17 52.27 6065 6065 MS2 20/24 Linfeng_091811_SIN3A_8.raw High TPVFSFLDLTYWK IPI:IPI00639887.3 3 1 CID 105.73 5.08 1.00 1 2 808.92194 1616.83660 0.39 52.21 6001 6001 MS2 20/24 Linfeng_091811_SIN3A_10.raw High YEKDFQScFGLHETR IPI:IPI00639887.3 2 1 CID C8(Carbamidomethyl) 85.90 4.99 1.00 1 3 639.62177 1916.85074 -4.64 28.84 3008 3008 MS2 29/56 Linfeng_091811_SIN3A_7.raw High TPVFSFLDLTYWK IPI:IPI00639887.3 3 1 CID 51.08 4.90 1.00 1 3 539.61676 1616.83573 -0.14 52.25 5991 5991 MS2 23/48 Linfeng_091811_SIN3A_7.raw High TPVFSFLDLTYWK IPI:IPI00639887.3 3 1 CID 92.63 4.69 1.00 1 2 808.92163 1616.83599 0.01 52.25 6071 6071 MS2 20/24 Linfeng_091811_SIN3A_9.raw High SGDIcNAcVLLVK IPI:IPI00639887.3 2 1 CID "C5(Carbamidomethyl), C8(Carbamidomethyl)" 43.02 4.24 1.00 1 2 724.86267 1448.71807 -3.87 33.86 3676 3676 MS2 19/24 Linfeng_091811_SIN3A_7.raw IPI:IPI00644504.2 214 24.6 9.55 Brix domain containing 1 13.08 3 2 17.38 0.00 28.43 13.08 2 2 28.06 7.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RTHLASDDLYK IPI:IPI00644504.2 3 1 CID 48.84 4.98 1.00 1 3 440.22882 1318.67191 -2.37 20.09 2043 2043 MS2 23/40 Linfeng_091611_rIgG_6.raw High NITRPFEDQTSLEFFSK IPI:IPI00644504.2 3 1 CID 67.13 4.58 1.00 1 3 687.00690 2059.00614 -3.42 38.02 4451 4451 MS2 29/64 Linfeng_091611_rIgG_6.raw High NITRPFEDQTSLEFFSK 3 0 CID 46.46 4.29 1.00 1 3 687.00592 2059.00321 -4.84 38.22 4458 4458 MS2 32/64 Linfeng_091811_SIN3A_6.raw IPI:IPI00657755.3 499 57.0 7.78 Isoform 6 of Suppressor of tumorigenicity 7 protein 3.21 1 1 45.50 0.00 24.09 3.21 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AFLSTLFAPLNFVmEK IPI:IPI00657755.3 10 1 CID M14(Oxidation) 46.95 6.28 1.00 1 3 615.32629 1843.96433 -1.11 52.65 6468 6468 MS2 26/60 Linfeng_091811_SIN3A_5.raw IPI:IPI00658205.1 660 76.5 7.93 77 kDa protein 2.73 1 1 31.71 0.00 26.27 2.73 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VFQTEAELQEVISDLQSK IPI:IPI00658205.1 4 1 CID 106.97 6.00 1.00 1 3 688.68872 2064.05161 0.96 47.80 5533 5533 MS2 30/68 Linfeng_091611_rIgG_2.raw IPI:IPI00742682.2 2363 267.1 5.02 Nucleoprotein TPR 0.76 1 1 35.73 0.00 17.31 0.76 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GQNLLLTNLQTIQGILER IPI:IPI00742682.2 1 1 CID 51.42 4.80 1.00 1 3 675.38922 2024.15311 1.56 53.72 6299 6299 MS2 28/68 Linfeng_091611_rIgG_1.raw IPI:IPI00744887.2 1380 150.7 7.64 "Isoform 3 of 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2" 2.17 1 1 66.84 0.00 170.39 2.17 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QGPPEEERGTPEGAcSVGHEGSVDAPAPSK IPI:IPI00744887.2 2 1 CID C15(Carbamidomethyl) 8.32 4.63 1.00 1 3 1011.46552 3032.38199 5.54 36.83 4132 4132 MS2 12/116 Linfeng_091611_rIgG_9.raw IPI:IPI00748953.2 1048 110.3 9.83 Isoform 1 of Histone deacetylase complex subunit SAP130 22.23 39 11 16.41 0.00 502.63 22.23 39 11 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QYPVSAQAPNSAITAQTGVGVASTVHLNPmQLmTVDASHAR IPI:IPI00748953.2 2 1 CID "M30(Oxidation), M33(Oxidation)" 300.00 7.53 1.00 1 4 1063.52600 4251.08217 -2.38 35.50 4099 4099 MS2 35/240 Linfeng_091811_SIN3A_3.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 141.16 7.50 1.00 1 2 1261.63989 2522.27251 -3.80 41.42 4832 4832 MS2 26/40 Linfeng_091811_SIN3A_2.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGR IPI:IPI00748953.2 4 1 CID 300.00 6.87 1.00 1 4 852.92694 3408.68593 -3.88 37.20 4284 4284 MS2 44/210 Linfeng_091811_SIN3A_2.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 300.00 6.77 1.00 1 3 841.42902 2522.27250 -3.81 41.34 4822 4822 MS2 41/80 Linfeng_091811_SIN3A_2.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGR IPI:IPI00748953.2 4 1 CID 114.25 6.44 1.00 1 3 1136.89954 3408.68406 -4.43 37.19 4283 4283 MS2 30/140 Linfeng_091811_SIN3A_2.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGRDSEVSAR IPI:IPI00748953.2 4 1 CID 146.32 6.36 1.00 1 5 831.41058 4153.02381 -3.76 35.82 4102 4102 MS2 58/336 Linfeng_091811_SIN3A_2.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGRDSEVSAR IPI:IPI00748953.2 4 1 CID 139.38 5.86 1.00 1 4 1039.01343 4153.03188 -1.82 35.62 4075 4075 MS2 38/252 Linfeng_091811_SIN3A_2.raw High QYPVSAQAPNSAITAQTGVGVASTVHLNPmQLmTVDASHAR IPI:IPI00748953.2 2 1 CID "M30(Oxidation), M33(Oxidation)" 300.00 5.76 1.00 1 4 1063.52405 4251.07436 -4.22 35.63 4076 4076 MS2 38/240 Linfeng_091811_SIN3A_2.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGR IPI:IPI00748953.2 4 1 CID 80.45 5.59 1.00 1 3 1136.90137 3408.68955 -2.82 37.24 4327 4327 MS2 26/140 Linfeng_091811_SIN3A_3.raw High SDNRPSVPVQFQYFLPTYPPSAYPLAAHTYTPITSSVSTIR IPI:IPI00748953.2 2 1 CID 77.80 5.44 1.00 1 5 914.66644 4569.30311 -1.29 45.32 5328 5328 MS2 47/320 Linfeng_091811_SIN3A_2.raw High KQQHVISTEEGDmmETNSTDDEK IPI:IPI00748953.2 2 1 CID "M13(Oxidation), M14(Oxidation)" 18.66 5.23 1.00 1 4 671.78699 2684.12612 -1.42 17.69 1631 1631 MS2 34/132 Linfeng_091811_SIN3A_2.raw High KQQHVISTEEGDMmETNSTDDEK IPI:IPI00748953.2 2 1 CID M14(Oxidation) 60.35 4.99 1.00 1 4 667.78729 2668.12734 -2.87 20.53 2024 2024 MS2 40/132 Linfeng_091811_SIN3A_2.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 80.74 4.97 1.00 1 4 631.32477 2522.27724 -1.93 41.29 4850 4850 MS2 40/120 Linfeng_091811_SIN3A_3.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 95.43 4.90 1.00 1 4 631.32379 2522.27334 -3.48 41.65 4679 4679 MS2 36/120 Linfeng_091811_SIN3A_7.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 111.84 4.85 1.00 1 4 631.32397 2522.27407 -3.19 41.64 4744 4744 MS2 39/120 Linfeng_091811_SIN3A_8.raw High LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGR IPI:IPI00748953.2 4 1 CID 48.37 4.81 1.00 1 5 682.54315 3408.68665 -3.67 37.41 4311 4311 MS2 45/280 Linfeng_091811_SIN3A_2.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 80.81 4.75 1.00 1 4 631.32404 2522.27431 -3.09 41.57 4888 4888 MS2 38/120 Linfeng_091811_SIN3A_6.raw High KAMLQEIANQK IPI:IPI00748953.2 2 1 CID 49.91 4.74 1.00 1 2 637.34796 1273.68865 -3.69 24.45 2565 2565 MS2 18/20 Linfeng_091811_SIN3A_2.raw High KSPPKEYIDEEGVR IPI:IPI00748953.2 2 1 CID 58.78 4.64 1.00 1 3 549.61517 1646.83097 -4.58 20.86 2069 2069 MS2 24/52 Linfeng_091811_SIN3A_2.raw High QYPVSAQAPNSAITAQTGVGVASTVHLNPmQLmTVDASHAR IPI:IPI00748953.2 2 1 CID "M30(Oxidation), M33(Oxidation)" 135.06 4.63 1.00 1 4 1063.52344 4251.07192 -4.79 35.66 4142 4142 MS2 39/240 Linfeng_091811_SIN3A_4.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 102.23 4.62 1.00 1 4 631.32477 2522.27724 -1.93 41.51 4897 4897 MS2 41/120 Linfeng_091811_SIN3A_4.raw High HPQAGEIEAGGAGGGR IPI:IPI00748953.2 2 1 CID 65.04 4.52 1.00 1 3 488.57037 1463.69657 -1.44 17.13 1556 1556 MS2 31/60 Linfeng_091811_SIN3A_2.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 68.54 4.44 1.00 1 2 533.76312 1066.51897 -0.79 16.49 1468 1468 MS2 17/22 Linfeng_091811_SIN3A_2.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 79.60 4.41 1.00 1 2 533.76282 1066.51836 -1.36 15.47 1335 1335 MS2 18/22 Linfeng_091811_SIN3A_2.raw High INELIQGNMQR IPI:IPI00748953.2 2 1 CID 57.00 4.35 1.00 1 2 658.34039 1315.67351 -3.99 27.98 3132 3132 MS2 17/20 Linfeng_091811_SIN3A_4.raw High GAAAAAVMSSSK IPI:IPI00748953.2 3 1 CID 44.00 4.32 1.00 1 2 525.76459 1050.52190 -2.85 19.76 1957 1957 MS2 17/22 Linfeng_091811_SIN3A_1.raw High VHLcAAQLLQLTNLEHDVYER IPI:IPI00748953.2 2 1 CID C4(Carbamidomethyl) 101.31 4.32 1.00 1 4 631.32416 2522.27480 -2.90 41.25 4810 4810 MS2 38/120 Linfeng_091811_SIN3A_2.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 24.70 4.31 1.00 1 2 533.75983 1066.51238 -6.97 18.79 1783 1783 MS2 17/22 Linfeng_091811_SIN3A_2.raw High INELIQGNMQR IPI:IPI00748953.2 2 1 CID 54.73 4.31 1.00 1 2 658.34003 1315.67278 -4.55 27.97 3232 3232 MS2 17/20 Linfeng_091811_SIN3A_5.raw High INELIQGNMQR IPI:IPI00748953.2 2 1 CID 70.10 4.30 1.00 1 2 658.34076 1315.67424 -3.44 27.81 3078 3078 MS2 18/20 Linfeng_091811_SIN3A_3.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 72.83 4.26 1.00 1 2 533.76270 1066.51811 -1.59 14.84 1265 1265 MS2 18/22 Linfeng_091811_SIN3A_3.raw High INELIQGNmQR IPI:IPI00748953.2 2 1 CID M9(Oxidation) 58.59 4.23 1.00 1 2 666.33875 1331.67021 -2.60 24.30 2589 2589 MS2 17/20 Linfeng_091811_SIN3A_3.raw High INELIQGNMQR IPI:IPI00748953.2 2 1 CID 65.38 4.22 1.00 1 2 658.34052 1315.67375 -3.81 27.83 3033 3033 MS2 17/20 Linfeng_091811_SIN3A_2.raw High GAAAAAVMSSSK IPI:IPI00748953.2 3 1 CID 36.54 4.22 1.00 1 2 525.76868 1050.53008 4.94 20.30 1993 1993 MS2 16/22 Linfeng_091811_SIN3A_2.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 78.26 4.21 1.00 1 2 533.76025 1066.51323 -6.17 1.37 194 194 MS2 18/22 Linfeng_091811_SIN3A_2.raw High GAAAAAVMSSSK IPI:IPI00748953.2 3 1 CID 79.46 4.13 1.00 1 2 525.76495 1050.52263 -2.15 19.83 1963 1963 MS2 18/22 Linfeng_091811_SIN3A_3.raw High KAmLQEIANQK IPI:IPI00748953.2 2 1 CID M3(Oxidation) 30.74 4.12 1.00 1 2 645.34509 1289.68291 -4.15 19.41 1870 1870 MS2 15/20 Linfeng_091811_SIN3A_2.raw High GAAAAAVmSSSK IPI:IPI00748953.2 3 1 CID M8(Oxidation) 73.51 4.11 1.00 1 2 533.76361 1066.51995 0.13 13.53 1101 1101 MS2 16/22 Linfeng_091811_SIN3A_1.raw High INELIQGNmQR IPI:IPI00748953.2 2 1 CID M9(Oxidation) 56.53 4.10 1.00 1 2 666.33813 1331.66899 -3.52 24.15 2524 2524 MS2 17/20 Linfeng_091811_SIN3A_2.raw IPI:IPI00759472.1 914 104.9 9.45 Isoform 2 of Inner centromere protein 1.53 2 1 74.10 0.00 34.31 1.53 1 1 49.63 1.53 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLVWLEEIQEEAER 2 0 CID 76.00 5.41 1.00 1 3 586.95422 1758.84812 -3.66 48.78 5248 5248 MS2 28/52 Linfeng_091611_rIgG_3.raw High DLVWLEEIQEEAER IPI:IPI00759472.1 2 1 CID 73.75 4.40 1.00 1 3 586.95734 1758.85746 1.65 48.99 5789 5789 MS2 25/52 Linfeng_091811_SIN3A_2.raw IPI:IPI00784001.5 68 7.8 8.57 Similar to Histone H3.1 47.06 16 1 85.18 0.00 66.50 47.06 3 1 169.08 47.06 13 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 149.55 9.78 1.00 1 3 1201.56995 3602.69529 -0.35 54.04 6234 6234 MS2 38/124 Linfeng_091811_SIN3A_9.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK 2 0 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 300.00 8.49 1.00 1 3 1201.57288 3602.70407 2.08 53.76 5998 5998 MS2 32/124 Linfeng_091611_rIgG_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 154.77 8.31 1.00 1 4 901.42847 3602.69204 -1.26 53.99 6230 6230 MS2 43/186 Linfeng_091811_SIN3A_9.raw High FQSSAVMALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "C13(Carbamidomethyl), C27(Carbamidomethyl)" 142.06 8.02 1.00 1 3 1196.24097 3586.70835 1.87 54.50 6215 6215 MS2 34/124 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 300.00 7.96 1.00 1 4 901.42963 3602.69668 0.03 54.01 6169 6169 MS2 48/186 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK 2 0 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 137.70 7.30 1.00 1 4 901.43097 3602.70205 1.52 53.72 5993 5993 MS2 42/186 Linfeng_091611_rIgG_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 154.77 7.28 1.00 1 4 901.42938 3602.69570 -0.24 53.90 6380 6380 MS2 42/186 Linfeng_091811_SIN3A_1.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 300.00 7.26 1.00 1 3 1201.57104 3602.69858 0.56 54.06 6173 6173 MS2 30/124 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK 2 0 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 91.57 6.98 1.00 1 4 901.42883 3602.69350 -0.85 53.70 6296 6296 MS2 36/186 Linfeng_091611_rIgG_1.raw High FQSSAVMALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "C13(Carbamidomethyl), C27(Carbamidomethyl)" 141.55 6.97 1.00 1 4 897.43158 3586.70449 0.79 54.50 6214 6214 MS2 42/186 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 109.71 6.86 1.00 1 4 901.43085 3602.70156 1.39 52.30 6012 6012 MS2 38/186 Linfeng_091811_SIN3A_10.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 139.38 6.20 1.00 1 5 721.34601 3602.70093 1.21 54.07 6175 6175 MS2 50/248 Linfeng_091811_SIN3A_10.raw High FQSSAVMALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "C13(Carbamidomethyl), C27(Carbamidomethyl)" 124.58 6.17 1.00 1 5 718.14856 3586.71369 3.36 54.50 6273 6273 MS2 49/248 Linfeng_091811_SIN3A_9.raw High FQSSAVMALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "C13(Carbamidomethyl), C27(Carbamidomethyl)" 142.64 6.11 1.00 1 3 1196.24158 3586.71018 2.38 54.51 6275 6275 MS2 32/124 Linfeng_091811_SIN3A_9.raw High FQSSAVmALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "M7(Oxidation), C13(Carbamidomethyl), C27(Carbamidomethyl)" 300.00 5.65 1.00 1 5 721.34595 3602.70063 1.13 54.05 6236 6236 MS2 52/248 Linfeng_091811_SIN3A_9.raw High FQSSAVMALQEAcEAYLVGLFEDTNLcAIHAK IPI:IPI00784001.5 2 1 CID "C13(Carbamidomethyl), C27(Carbamidomethyl)" 300.00 5.23 1.00 1 5 718.14832 3586.71247 3.02 54.51 6216 6216 MS2 49/248 Linfeng_091811_SIN3A_10.raw IPI:IPI00784161.1 1726 198.9 4.91 Isoform 1 of Transcription elongation factor SPT6 0.70 1 1 44.44 0.00 25.64 0.70 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RPQGESYDQAIR IPI:IPI00784161.1 1 1 CID 34.03 4.73 1.00 1 3 473.90292 1419.69422 -2.36 19.97 1902 1902 MS2 23/44 Linfeng_091611_rIgG_1.raw IPI:IPI00788157.1 874 99.9 8.02 Isoform 2 of 5'-3' exoribonuclease 2 1.72 1 1 17.44 0.00 32.59 1.72 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELTmASLPFTFDVER IPI:IPI00788157.1 2 1 CID M4(Oxidation) 21.05 4.37 1.00 1 2 886.42944 1771.85161 -3.16 42.92 5058 5058 MS2 13/28 Linfeng_091811_SIN3A_3.raw IPI:IPI00790689.1 92 10.6 5.63 14-3-3 protein/cytosolic phospholipase A2 protein 15.22 1 1 17.58 0.00 10.37 15.22 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SVTEQGAELSNEER IPI:IPI00790689.1 3 1 CID 81.04 4.53 1.00 1 2 774.85840 1548.70952 -2.69 22.75 2175 2175 MS2 17/26 Linfeng_091811_SIN3A_7.raw IPI:IPI00792410.1 67 8.0 10.10 8 kDa protein 19.40 1 1 16.59 0.00 12.91 19.40 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KIEEIKDFLLTAR IPI:IPI00792410.1 2 1 CID 70.90 5.06 1.00 1 3 525.97223 1575.90213 -5.34 36.17 4000 4000 MS2 24/48 Linfeng_091811_SIN3A_10.raw IPI:IPI00795657.1 1070 121.1 8.28 SFRS2IP protein 3.64 2 2 65.53 0.00 35.84 3.64 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KLENTGIEANVLcLESEISENILEK IPI:IPI00795657.1 3 1 CID C13(Carbamidomethyl) 26.13 6.46 1.00 1 3 949.15436 2845.44852 -0.54 50.10 5821 5821 MS2 21/96 Linfeng_091611_rIgG_2.raw High SLEEKNESLTEHPR IPI:IPI00795657.1 3 1 CID 55.95 5.16 1.00 1 3 556.94275 1668.81369 -3.07 18.85 1734 1734 MS2 27/52 Linfeng_091611_rIgG_2.raw IPI:IPI00796563.1 69 7.7 8.62 8 kDa protein 27.54 1 1 36.18 0.00 61.56 27.54 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cVANSPYIIQKKSSmEDPR IPI:IPI00796563.1 1 1 CID "C1(Carbamidomethyl), M15(Oxidation)" 1.00 4.29 1.00 1 3 747.03699 2239.09641 5.25 37.64 4230 4230 MS2 19/72 Linfeng_091811_SIN3A_8.raw IPI:IPI00796862.1 143 16.0 9.91 16 kDa protein 13.29 1 1 6.16 0.00 8.65 13.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NKPQVPVPGSDISETQVER IPI:IPI00796862.1 2 1 CID 77.25 6.64 1.00 1 3 694.02466 2080.05942 -3.65 27.77 3085 3085 MS2 29/72 Linfeng_091811_SIN3A_6.raw IPI:IPI00797184.1 151 16.9 8.50 17 kDa protein 16.56 1 1 0.00 0.00 6.10 16.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AVSDASAGDYGSAIETLVTAISLIK IPI:IPI00797184.1 5 1 CID 38.71 6.10 1.00 1 3 818.09967 2452.28446 1.07 55.28 6620 6620 MS2 29/96 Linfeng_091611_rIgG_4.raw IPI:IPI00815843.1 124 14.6 10.62 RPL14 protein (Fragment) 9.68 1 1 9.00 0.00 12.40 9.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVAIVDVIDQNR IPI:IPI00815843.1 3 1 CID 76.89 4.35 1.00 1 2 677.88586 1354.76445 -3.33 39.63 4488 4488 MS2 19/22 Linfeng_091811_SIN3A_8.raw IPI:IPI00878538.1 125 14.7 6.37 Putative uncharacterized protein STAT5A 12.80 1 1 1.88 0.00 5.90 12.80 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AQATQLLEGLVQELQK IPI:IPI00878538.1 2 1 CID 63.02 5.90 1.00 1 3 590.33032 1768.97641 -2.27 49.65 5358 5358 MS2 33/60 Linfeng_091611_rIgG_3.raw IPI:IPI00892588.1 179 20.9 8.66 HLA-B associated transcript 1 6.70 1 1 22.45 0.00 31.68 6.70 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LTLHGLQQYYVK IPI:IPI00892588.1 13 1 CID 16.99 4.91 1.00 1 3 488.27130 1462.79935 -4.07 33.02 3915 3915 MS2 22/44 Linfeng_091811_SIN3A_5.raw IPI:IPI00894160.1 64 6.9 5.25 7 kDa protein 26.56 4 1 0.00 0.00 10.71 26.56 2 1 11.74 26.56 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EIFLSQPILLELEAPLK IPI:IPI00894160.1 11 1 CID 126.32 5.94 1.00 1 2 977.07074 1953.13420 1.75 52.05 6191 6191 MS2 22/32 Linfeng_091811_SIN3A_6.raw High EIFLSQPILLELEAPLK 11 0 CID 94.45 5.82 1.00 1 2 977.06805 1953.12883 -1.00 51.59 6160 6160 MS2 22/32 Linfeng_091611_rIgG_6.raw High EIFLSQPILLELEAPLK IPI:IPI00894160.1 11 1 CID 80.17 5.80 1.00 1 3 651.71558 1953.13218 0.71 51.96 6181 6181 MS2 33/64 Linfeng_091811_SIN3A_6.raw High EIFLSQPILLELEAPLK 11 0 CID 66.80 4.89 1.00 1 3 651.71454 1953.12906 -0.89 51.51 6150 6150 MS2 31/64 Linfeng_091611_rIgG_6.raw IPI:IPI00900318.1 2079 212.4 7.37 Isoform 2 of Nuclear pore complex protein Nup214 0.67 1 1 5.23 0.00 18.88 0.67 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TScKDDEAVVQAPR IPI:IPI00900318.1 5 1 CID C3(Carbamidomethyl) 10.17 4.27 1.00 1 3 525.91760 1575.73825 -3.15 19.95 1983 1983 MS2 21/52 Linfeng_091811_SIN3A_1.raw IPI:IPI00900338.1 1614 181.2 7.99 transcription activator BRG1 isoform E 0.93 1 1 26.96 0.00 37.80 0.93 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AIEEGTLEEIEEEVR IPI:IPI00900338.1 6 1 CID 69.83 5.49 1.00 1 3 582.61865 1745.84140 -1.52 40.20 4578 4578 MS2 28/56 Linfeng_091611_rIgG_2.raw IPI:IPI00908873.1 700 73.7 9.47 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 3.43 1 1 61.39 0.00 40.02 3.43 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATGATQQDANASSLLDIYSFWLNR IPI:IPI00908873.1 1 1 CID 77.48 6.97 1.00 1 3 881.43231 2642.28238 -0.85 52.46 5705 5705 MS2 32/92 Linfeng_091611_rIgG_3.raw IPI:IPI00909555.1 357 41.2 6.73 "cDNA FLJ51602, highly similar to Interferon-induced guanylate-binding protein 1" 3.36 1 1 50.55 0.00 50.20 3.36 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ImKNEIQDLQTK IPI:IPI00909555.1 2 1 CID M2(Oxidation) 20.44 4.26 1.00 1 2 738.88531 1476.76335 -6.35 30.11 3523 3523 MS2 13/22 Linfeng_091811_SIN3A_5.raw IPI:IPI00910810.1 255 29.1 5.63 "cDNA FLJ60029, highly similar to Keratin, type II cuticular Hb3" 7.45 28 2 17.99 0.00 723.58 7.45 28 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 40.78 6.20 1.00 1 3 688.34802 2063.02951 0.13 50.23 5990 5990 MS2 25/68 Linfeng_091611_rIgG_6.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 49.92 6.07 1.00 1 3 688.34680 2063.02585 -1.64 50.06 6037 6037 MS2 25/68 Linfeng_091611_rIgG_4.raw High KSDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 76.82 5.99 1.00 1 2 1096.06360 2191.11992 -1.96 50.72 5491 5491 MS2 21/36 Linfeng_091611_rIgG_3.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 50.66 5.91 1.00 1 3 688.34637 2063.02457 -2.26 50.15 5855 5855 MS2 25/68 Linfeng_091611_rIgG_1.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 52.12 5.89 1.00 1 2 1032.01782 2063.02837 -0.42 54.37 6505 6505 MS2 19/34 Linfeng_091611_rIgG_5.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 51.84 5.85 1.00 1 3 688.34735 2063.02750 -0.84 50.08 5996 5996 MS2 25/68 Linfeng_091611_rIgG_5.raw High KSDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 68.73 5.66 1.00 1 2 1096.06360 2191.11992 -1.96 50.73 6078 6078 MS2 19/36 Linfeng_091611_rIgG_5.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 50.45 5.64 1.00 1 2 1032.01941 2063.03154 1.12 50.22 5864 5864 MS2 17/34 Linfeng_091611_rIgG_1.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 49.17 5.57 1.00 1 2 1032.01978 2063.03227 1.47 54.39 5918 5918 MS2 19/34 Linfeng_091611_rIgG_3.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 46.17 5.57 1.00 1 3 688.34827 2063.03025 0.49 54.32 6517 6517 MS2 26/68 Linfeng_091611_rIgG_4.raw High KSDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 77.09 5.56 1.00 1 2 1096.06494 2191.12261 -0.73 50.73 6120 6120 MS2 19/36 Linfeng_091611_rIgG_4.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 47.15 5.53 1.00 1 3 688.34680 2063.02585 -1.64 50.10 5413 5413 MS2 25/68 Linfeng_091611_rIgG_3.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 54.56 5.49 1.00 1 3 688.34491 2063.02018 -4.39 50.20 6144 6144 MS2 26/68 Linfeng_091611_rIgG_8.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 43.94 5.47 1.00 1 3 688.34918 2063.03299 1.82 54.37 6469 6469 MS2 25/68 Linfeng_091611_rIgG_6.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 38.96 5.40 1.00 1 3 688.34937 2063.03354 2.08 54.33 5910 5910 MS2 27/68 Linfeng_091611_rIgG_3.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 46.23 5.34 1.00 1 2 1032.01929 2063.03130 1.00 50.27 5994 5994 MS2 18/34 Linfeng_091611_rIgG_6.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 57.36 5.32 1.00 1 2 1032.02063 2063.03398 2.30 54.42 6377 6377 MS2 16/34 Linfeng_091611_rIgG_1.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 43.06 5.29 1.00 1 2 1032.01807 2063.02886 -0.19 50.24 5838 5838 MS2 16/34 Linfeng_091611_rIgG_2.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 45.08 5.27 1.00 1 2 1032.01746 2063.02764 -0.78 50.17 5422 5422 MS2 17/34 Linfeng_091611_rIgG_3.raw High KSDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 52.73 5.22 1.00 1 2 1096.06555 2191.12383 -0.18 46.92 5599 5599 MS2 17/36 Linfeng_091611_rIgG_5.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 54.92 5.18 1.00 1 3 688.34711 2063.02677 -1.20 50.17 5829 5829 MS2 24/68 Linfeng_091611_rIgG_2.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 48.48 5.13 1.00 1 2 1032.01831 2063.02934 0.05 50.11 5999 5999 MS2 17/34 Linfeng_091611_rIgG_5.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 57.80 5.12 1.00 1 3 688.34845 2063.03080 0.75 50.17 5896 5896 MS2 24/68 Linfeng_091611_rIgG_7.raw High KSDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 59.16 5.05 1.00 1 2 1096.06470 2191.12212 -0.96 50.75 5903 5903 MS2 18/36 Linfeng_091611_rIgG_2.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 42.35 5.03 1.00 1 3 688.34869 2063.03153 1.11 54.35 6291 6291 MS2 24/68 Linfeng_091611_rIgG_2.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 45.60 4.84 1.00 1 2 1032.01685 2063.02641 -1.37 50.12 6044 6044 MS2 18/34 Linfeng_091611_rIgG_4.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 35.13 4.80 1.00 1 3 688.34875 2063.03171 1.20 54.33 6366 6366 MS2 25/68 Linfeng_091611_rIgG_1.raw High SDLEANVEALTQEIDFLR IPI:IPI00910810.1 2 1 CID 60.11 4.75 1.00 1 2 1032.01868 2063.03008 0.41 50.34 5918 5918 MS2 15/34 Linfeng_091611_rIgG_7.raw IPI:IPI00914005.2 533 55.3 4.59 Putative uncharacterized protein TNRC18 6.00 2 2 7.58 0.00 17.03 6.00 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ITEPLREGPEEEPLAER IPI:IPI00914005.2 5 1 CID 23.70 4.87 1.00 1 3 655.66693 1964.98624 -3.17 28.17 3116 3116 MS2 24/64 Linfeng_091811_SIN3A_1.raw High KPPGLAAGPAGTYGK IPI:IPI00914005.2 5 1 CID 18.74 4.38 1.00 1 3 462.25577 1384.75275 -4.08 22.53 2344 2344 MS2 27/56 Linfeng_091811_SIN3A_1.raw IPI:IPI00915955.1 1047 121.6 6.92 122 kDa protein 3.53 2 2 13.46 0.00 21.94 1.72 1 1 38.34 1.81 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDSEIYEDAVELQQFFIK IPI:IPI00916608.1 12 1 CID 104.42 5.13 1.00 1 3 725.68652 2175.04502 -1.97 52.52 6113 6113 MS2 29/68 Linfeng_091611_rIgG_2.raw High EILEQLLEAIVVATNPSGR IPI:IPI00917348.1 13 1 CID 48.23 5.11 1.00 1 3 684.71631 2052.13437 0.35 55.60 6569 6569 MS2 29/72 Linfeng_091811_SIN3A_2.raw IPI:IPI00916535.1 516 58.9 6.02 "prolyl 4-hydroxylase, alpha I subunit isoform 3 precursor" 3.68 1 1 8.11 0.00 9.73 3.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VSVLDYLSYAVYQQGDLDK IPI:IPI00916535.1 3 1 CID 25.94 5.80 1.00 1 3 726.02991 2176.07517 -2.63 51.14 6171 6171 MS2 22/72 Linfeng_091611_rIgG_4.raw IPI:IPI00917866.1 425 47.6 4.77 Putative uncharacterized protein KRT35 13.18 6 4 61.60 0.00 281.16 13.18 6 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SDLEAQVESLKEELLcLK IPI:IPI00032513.3;IPI:IPI00917866.1 6 2 CID C16(Carbamidomethyl) 109.69 6.28 1.00 1 2 1052.54431 2104.08135 -1.41 46.19 5495 5495 MS2 22/34 Linfeng_091611_rIgG_6.raw High SDLEAQVESLKEELLcLK IPI:IPI00032513.3;IPI:IPI00917866.1 6 2 CID C16(Carbamidomethyl) 142.39 6.04 1.00 1 2 1052.54346 2104.07964 -2.22 46.19 4932 4932 MS2 22/34 Linfeng_091611_rIgG_3.raw High DALESTLAETEAR IPI:IPI00917866.1 2 1 CID 87.32 4.84 1.00 1 2 703.34039 1405.67351 -5.05 34.00 3928 3928 MS2 19/24 Linfeng_091611_rIgG_6.raw High TKYETEVSLR IPI:IPI00917866.1 2 1 CID 50.33 4.73 1.00 1 3 409.21750 1225.63794 -3.58 22.88 2482 2482 MS2 23/36 Linfeng_091611_rIgG_4.raw High LNVEVDAAPPVDLNR IPI:IPI00917866.1 2 1 CID 65.79 4.46 1.00 1 2 811.42877 1621.85027 -2.61 34.14 3400 3400 MS2 18/28 Linfeng_091611_rIgG_3.raw High LNVEVDAAPPVDLNR IPI:IPI00917866.1 2 1 CID 64.82 4.40 1.00 1 2 811.42902 1621.85076 -2.31 34.29 3981 3981 MS2 17/28 Linfeng_091611_rIgG_5.raw IPI:IPI00925226.1 133 13.8 9.38 14 kDa protein 14.29 1 1 4.60 0.00 17.10 14.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TLAGLVVQLLQFQEDAFGK IPI:IPI00925226.1 2 1 CID 127.46 6.56 1.00 1 3 693.05048 2077.13687 1.90 55.29 6534 6534 MS2 38/72 Linfeng_091811_SIN3A_2.raw IPI:IPI00927271.1 127 15.2 10.20 Protein 11.02 1 1 16.76 0.00 10.50 11.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GFAFVYFENVDDAK IPI:IPI00927271.1 5 1 CID 85.99 5.04 1.00 1 2 811.37885 1621.75041 -1.82 43.27 5103 5103 MS2 20/26 Linfeng_091811_SIN3A_6.raw IPI:IPI00927953.1 530 59.6 9.07 "cDNA FLJ61347, highly similar to General transcription factor II-I" 11.89 4 3 14.76 0.00 8.57 4.15 1 1 21.39 11.89 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VPEIEVTVEGPNNNNPQTSAVR IPI:IPI00927953.1 6 1 CID 97.25 7.21 1.00 1 3 788.72827 2364.17026 -3.74 32.43 3656 3656 MS2 29/84 Linfeng_091811_SIN3A_2.raw High VPEIEVTVEGPNNNNPQTSAVR 6 0 CID 45.87 4.63 1.00 1 3 788.72919 2364.17301 -2.58 32.27 3166 3166 MS2 23/84 Linfeng_091611_rIgG_3.raw High VPYPVFESNPEFLYVEGLPEGIPFR IPI:IPI00927953.1 6 1 CID 85.03 4.62 1.00 1 3 965.82556 2895.46213 0.57 51.64 6123 6123 MS2 27/96 Linfeng_091811_SIN3A_2.raw High RPELLTHSTTEVTQPR IPI:IPI00927953.1 6 1 CID 54.43 4.41 1.00 1 3 622.33093 1864.97824 -5.03 23.28 2402 2402 MS2 25/60 Linfeng_091811_SIN3A_2.raw IPI:IPI00930629.1 1316 148.9 5.60 Putative uncharacterized protein NUP160 2.20 3 2 14.39 0.00 13.42 0.84 1 1 17.29 2.20 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FVSSPQTIVELFFQEVAR IPI:IPI00930629.1 2 1 CID 79.35 6.03 1.00 1 3 699.70599 2097.10343 0.87 55.17 6518 6518 MS2 32/68 Linfeng_091811_SIN3A_2.raw High DLLILQQLLmR 2 0 CID M10(Oxidation) 70.72 4.41 1.00 1 2 686.40332 1371.79936 -2.58 51.34 5977 5977 MS2 16/20 Linfeng_091611_rIgG_2.raw High DLLILQQLLmR IPI:IPI00930629.1 2 1 CID M10(Oxidation) 65.63 4.33 1.00 1 2 686.40564 1371.80400 0.80 51.62 6120 6120 MS2 17/20 Linfeng_091811_SIN3A_2.raw IPI:IPI00936738.1 583 66.2 8.18 Isoform 1 of Torsin-1A-interacting protein 1 2.23 1 1 11.82 0.00 10.49 2.23 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SELGNQSPSTSSR IPI:IPI00936738.1 2 1 CID 82.14 4.47 1.00 1 2 675.31464 1349.62200 -5.35 17.71 1798 1798 MS2 20/24 Linfeng_091811_SIN3A_5.raw IPI:IPI00939119.1 1135 131.0 5.76 Isoform 2 of Cell division cycle and apoptosis regulator protein 1 5.29 7 4 45.32 0.00 145.51 5.29 7 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDEDEKTILNLENSNK IPI:IPI00939119.1 2 1 CID 79.65 5.57 1.00 1 3 621.63501 1862.89048 -3.97 30.40 3385 3385 MS2 34/60 Linfeng_091811_SIN3A_2.raw High IQTLPNQNQSQTQPLLK IPI:IPI00939119.1 2 1 CID 27.53 5.20 1.00 1 3 651.02374 1951.05667 -2.10 29.55 3317 3317 MS2 27/64 Linfeng_091811_SIN3A_3.raw High IQTLPNQNQSQTQPLLK IPI:IPI00939119.1 2 1 CID 61.88 4.79 1.00 1 3 651.02283 1951.05393 -3.51 29.73 3353 3353 MS2 28/64 Linfeng_091811_SIN3A_6.raw High ScALAEDPQELR IPI:IPI00939119.1 2 1 CID C2(Carbamidomethyl) 75.59 4.62 1.00 1 2 694.82477 1388.64226 -3.79 27.32 3012 3012 MS2 18/22 Linfeng_091811_SIN3A_3.raw High ScALAEDPQELR IPI:IPI00939119.1 2 1 CID C2(Carbamidomethyl) 76.77 4.54 1.00 1 2 694.82520 1388.64311 -3.18 27.41 2978 2978 MS2 18/22 Linfeng_091811_SIN3A_2.raw High DLEEILYTLGLHLSR IPI:IPI00939119.1 2 1 CID 62.12 4.35 1.00 1 3 591.32440 1771.95865 -0.16 54.67 6432 6432 MS2 29/56 Linfeng_091811_SIN3A_3.raw High ScALAEDPQELR IPI:IPI00939119.1 2 1 CID C2(Carbamidomethyl) 57.84 4.09 1.00 1 2 694.82477 1388.64226 -3.79 27.52 3068 3068 MS2 17/22 Linfeng_091811_SIN3A_4.raw IPI:IPI00940972.1 153 17.5 9.35 Histone deacetylase complex subunit SAP18 22.88 5 2 20.57 0.00 56.85 22.88 2 2 66.21 22.88 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GNVPSSELQIYTWMDATLK IPI:IPI00940972.1 3 1 CID 48.75 5.82 1.00 1 3 718.35632 2153.05442 -1.86 47.56 5535 5535 MS2 29/72 Linfeng_091811_SIN3A_9.raw High GNVPSSELQIYTWMDATLK 3 0 CID 55.42 5.36 1.00 1 3 718.35614 2153.05387 -2.12 47.12 5442 5442 MS2 31/72 Linfeng_091611_rIgG_9.raw High FQIGDYLDIAITPPNR IPI:IPI00940972.1 3 1 CID 88.85 4.84 1.00 1 2 916.98010 1832.95293 -0.69 46.83 5446 5446 MS2 18/30 Linfeng_091811_SIN3A_9.raw High FQIGDYLDIAITPPNR 3 0 CID 88.02 4.83 1.00 1 2 916.98022 1832.95317 -0.56 46.44 5356 5356 MS2 20/30 Linfeng_091611_rIgG_9.raw High FQIGDYLDIAITPPNR IPI:IPI00940972.1 3 1 CID 35.81 4.35 1.00 1 3 611.65479 1832.94980 -2.40 46.66 5425 5425 MS2 25/60 Linfeng_091811_SIN3A_9.raw IPI:IPI00941764.1 167 18.2 5.49 Ribophorin II 7.19 1 1 3.42 0.00 4.75 7.19 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SIVEEIEDLVAR IPI:IPI00941764.1 5 1 CID 58.91 4.75 1.00 1 2 686.86914 1372.73100 -0.66 51.26 6186 6186 MS2 19/22 Linfeng_091611_rIgG_4.raw IPI:IPI00946464.1 2227 247.6 5.26 Putative uncharacterized protein ENSP00000420449 0.90 1 1 45.96 0.00 35.07 0.90 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EAKGELYWDDGVSKDAVTEK IPI:IPI00946464.1 1 1 CID 10.40 4.59 1.00 1 3 747.36407 2240.07767 2.60 41.67 4706 4706 MS2 15/76 Linfeng_091811_SIN3A_10.raw IPI:IPI00829697.1 117 13.5 9.10 13 kDa protein 9.40 2 1 10.07 9.40 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SEDTAMYYcAR IPI:IPI00829697.1 1 1 CID C9(Carbamidomethyl) 59.40 4.23 1.00 1 2 683.77203 1366.53679 -2.54 25.77 2856 2856 MS2 16/20 Linfeng_091611_rIgG_5.raw High SEDTAmYYcAR IPI:IPI00829697.1 1 1 CID "M6(Oxidation), C9(Carbamidomethyl)" 83.29 4.21 1.00 1 2 691.76855 1382.52983 -3.86 22.75 2447 2447 MS2 16/20 Linfeng_091611_rIgG_5.raw IPI:IPI00915935.1 104 12.3 5.30 Putative uncharacterized protein POLR2D 15.38 1 1 5.31 15.38 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FEDEELQQILDDIQTK IPI:IPI00915935.1 3 1 CID 78.67 5.31 1.00 1 3 655.32104 1963.94858 -0.51 48.41 5363 5363 MS2 29/60 Linfeng_091611_rIgG_10.raw IPI:IPI00002831.4 183 20.9 9.36 Histone deacetylase complex subunit SAP30L 25.14 3 3 72.62 25.14 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EGPPAAPAAAAPGYGQSccLIEDGER IPI:IPI00002831.4 3 1 CID "C18(Carbamidomethyl), C19(Carbamidomethyl)" 94.76 6.88 1.00 1 3 882.06110 2644.16874 -3.04 32.20 3526 3526 MS2 34/100 Linfeng_091811_SIN3A_8.raw High HLYIcDFHK IPI:IPI00002831.4 1 1 CID C5(Carbamidomethyl) 44.05 4.39 1.00 1 3 411.53174 1232.58066 -6.05 26.69 2788 2788 MS2 20/32 Linfeng_091811_SIN3A_8.raw High ETLAYFIYmVK IPI:IPI00002831.4 3 1 CID M9(Oxidation) 53.73 4.17 1.00 1 2 697.35529 1393.70329 -2.84 42.60 4865 4865 MS2 17/20 Linfeng_091811_SIN3A_8.raw IPI:IPI00008527.3 114 11.5 4.32 60S acidic ribosomal protein P1 14.04 1 1 4.19 14.04 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AAGVNVEPFWPGLFAK IPI:IPI00008527.3 1 1 CID 61.23 4.19 1.00 1 2 851.94977 1702.89226 -1.76 46.69 5340 5340 MS2 18/30 Linfeng_091811_SIN3A_10.raw IPI:IPI00796075.1 178 20.1 4.22 20 kDa protein 18.54 2 2 11.06 18.54 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VEEQEPELTSTPNFVVEVIK IPI:IPI00796075.1 2 1 CID 95.16 4.76 1.00 1 3 763.05939 2287.16361 -3.01 42.76 4820 4820 MS2 35/76 Linfeng_091811_SIN3A_7.raw High EVSFQSTGESEWK IPI:IPI00796075.1 3 1 CID 78.91 4.16 1.00 1 2 757.34198 1513.67668 -2.58 30.72 3264 3264 MS2 21/24 Linfeng_091811_SIN3A_7.raw IPI:IPI00000643.1 211 23.8 6.70 BAG family molecular chaperone regulator 2 5.21 2 1 24.12 5.21 1 1 14.40 5.21 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLESLDQLELR 1 0 CID 53.59 4.34 1.00 1 2 664.87250 1328.73772 -3.28 39.82 4512 4512 MS2 17/20 Linfeng_091811_SIN3A_8.raw High LLESLDQLELR IPI:IPI00000643.1 1 1 CID 39.33 3.84 1.00 1 2 664.87408 1328.74089 -0.89 39.76 9500 9500 MS2 16/20 Linfeng_081211_IgG_8.raw IPI:IPI00000769.2 665 73.2 9.45 Kinesin-like protein KIF22 1.65 1 1 28.53 1.65 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ANILGLAAGQR IPI:IPI00000769.2 1 1 CID 49.52 4.13 1.00 1 2 542.31720 1083.62712 0.13 33.49 7221 7221 MS2 17/20 Linfeng_081211_IgG_4.raw IPI:IPI00001146.1 80 9.1 9.58 U6 snRNA-associated Sm-like protein LSm6 13.75 1 1 6.13 13.75 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GNNVLYISTQK IPI:IPI00001146.1 1 1 CID 38.86 3.75 1.00 1 2 618.83185 1236.65642 -1.53 28.75 5696 5696 MS2 15/20 Linfeng_081211_IgG_10.raw IPI:IPI00001655.1 193 22.8 9.76 UPF0468 protein C16orf80 6.22 1 1 5.77 6.22 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LYSEDELPAEFK IPI:IPI00001655.1 1 1 CID 54.98 3.64 1.00 1 2 720.84741 1440.68755 -1.26 34.54 7878 7878 MS2 14/22 Linfeng_081211_IgG_8.raw IPI:IPI00002649.2 584 67.0 6.32 Isoform 2 of Pinin 1.88 1 1 72.45 1.88 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IFGLLmGTLQK IPI:IPI00002649.2 2 1 CID M6(Oxidation) 46.28 3.55 1.00 1 2 618.85510 1236.70293 0.65 41.59 10398 10398 MS2 13/20 Linfeng_081211_IgG_3.raw IPI:IPI00002938.1 272 31.1 9.88 Activator of basal transcription 1 4.04 1 1 24.27 4.04 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ETDFYLQSVER IPI:IPI00002938.1 1 1 CID 56.69 3.84 1.00 1 2 693.83093 1386.65459 0.69 33.90 7446 7446 MS2 14/20 Linfeng_081211_IgG_6.raw IPI:IPI00004459.1 313 35.2 9.99 Probable dimethyladenosine transferase 4.15 1 1 10.33 4.15 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IQQILTSTGFSDK IPI:IPI00004459.1 1 1 CID 51.92 4.01 1.00 1 2 719.38306 1437.75884 0.27 32.74 7017 7017 MS2 17/24 Linfeng_081211_IgG_7.raw IPI:IPI00004655.1 258 29.2 9.01 Protein FRG1 5.04 1 1 9.45 5.04 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YLGINSDGLVVGR IPI:IPI00004655.1 1 1 CID 54.95 4.28 1.00 1 2 681.87152 1362.73577 -1.38 37.01 8474 8474 MS2 19/24 Linfeng_081211_IgG_7.raw IPI:IPI00005024.3 1328 148.8 9.28 Isoform 1 of Myb-binding protein 1A 0.90 1 1 92.45 0.90 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VYSTALSSFLTK IPI:IPI00005024.3 2 1 CID 29.88 3.70 1.00 1 2 658.85840 1316.70952 -0.12 47.88 8497 8497 MS2 16/22 Linfeng_081211_IgG_1.raw IPI:IPI00005101.6 643 73.3 8.56 Isoform 2 of Sentrin-specific protease 1 1.56 1 1 4.02 1.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALALQLQNQR IPI:IPI00005101.6 2 1 CID 41.73 4.02 1.00 1 2 577.83514 1154.66301 -0.93 29.60 5927 5927 MS2 15/18 Linfeng_081211_IgG_4.raw IPI:IPI00005300.4 758 86.0 6.60 Isoform 2 of Protein FAM40B 3.03 1 1 21.99 3.03 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MEDPAAPGTGGPPANGNGNGGGK IPI:IPI00005300.4 2 1 CID 1.00 3.52 1.00 1 2 1011.94745 2022.88762 -2.92 33.42 7469 7469 MS2 8/44 Linfeng_081211_IgG_8.raw IPI:IPI00005492.2 334 36.6 8.27 WD repeat-containing protein 5 3.29 1 1 5.71 3.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IWDTASGQcLK IPI:IPI00005492.2 1 1 CID C9(Carbamidomethyl) 28.66 3.81 1.00 1 2 639.80957 1278.61186 -2.26 28.30 5530 5530 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00005613.3 240 27.9 8.81 Splicing factor U2AF 35 kDa subunit 5.42 1 1 20.18 5.42 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NPQNSSQSADGLR IPI:IPI00005613.3 1 1 CID 75.99 3.64 1.00 1 2 687.32422 1373.64116 0.52 18.66 2476 2476 MS2 18/24 Linfeng_081211_IgG_7.raw IPI:IPI00005675.3 690 77.6 8.79 NF-kappa-B-repressing factor 3.62 2 2 59.97 2.03 1 1 52.04 1.59 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLTDGYAcEVR IPI:IPI00005675.3 2 1 CID C8(Carbamidomethyl) 60.83 4.28 1.00 1 2 648.81464 1296.62200 -2.56 29.62 3327 3327 MS2 18/20 Linfeng_091811_SIN3A_3.raw High cQNIYLTTGYAGSK IPI:IPI00005675.3 2 1 CID C1(Carbamidomethyl) 26.73 3.55 1.00 1 2 788.37585 1575.74443 -1.76 30.79 6563 6563 MS2 15/26 Linfeng_081211_IgG_3.raw IPI:IPI00006099.1 1282 145.7 6.44 Ribosome biogenesis protein BMS1 homolog 1.09 1 1 54.74 1.09 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLQDLQLGDEEDAR IPI:IPI00006099.1 1 1 CID 36.21 4.36 1.00 1 2 807.90326 1614.79924 1.36 35.47 8318 8318 MS2 17/26 Linfeng_081211_IgG_3.raw IPI:IPI00006715.3 631 71.6 4.65 Double-strand-break repair protein rad21 homolog 2.06 1 1 24.14 2.06 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DVIDEPIIEEPSR IPI:IPI00006715.3 1 1 CID 84.73 4.55 1.00 1 2 756.38293 1511.75859 -0.18 35.07 8174 8174 MS2 19/24 Linfeng_081211_IgG_3.raw IPI:IPI00006900.1 479 54.5 5.62 Something about silencing protein 10 7.31 2 2 28.76 4.59 1 1 33.70 2.71 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QSQQEAEEEEREEEEEAQIIQR IPI:IPI00006900.1 1 1 CID 84.84 5.54 1.00 1 3 906.40869 2717.21152 -0.69 30.05 6067 6067 MS2 27/84 Linfeng_081211_IgG_4.raw High ESPELLELIEDLK IPI:IPI00006900.1 1 1 CID 58.26 4.72 1.00 1 2 764.41071 1527.81413 -0.77 50.41 6080 6080 MS2 18/24 Linfeng_091611_rIgG_4.raw IPI:IPI00006969.2 415 46.1 6.39 Isoform 2 of Extracellular matrix protein 1 3.13 1 1 7.66 3.13 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NVALVSGDTENAK IPI:IPI00006969.2 3 1 CID 45.90 4.03 1.00 1 2 659.33539 1317.66350 -0.80 23.96 4329 4329 MS2 18/24 Linfeng_081211_IgG_6.raw IPI:IPI00007188.5 298 32.9 9.74 ADP/ATP translocase 2 4.36 3 1 52.94 4.36 1 1 34.73 4.36 1 1 27.44 4.36 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DFLAGGVAAAISK IPI:IPI00007188.5 1 1 CID 60.67 4.94 1.00 1 2 610.33765 1219.66802 -0.14 38.66 9032 9032 MS2 21/24 Linfeng_081211_IgG_7.raw High DFLAGGVAAAISK 1 0 CID 69.77 4.84 1.00 1 2 610.33618 1219.66509 -2.55 38.49 4435 4435 MS2 21/24 Linfeng_091611_rIgG_7.raw High DFLAGGVAAAISK 1 0 CID 57.45 4.68 1.00 1 2 610.33539 1219.66350 -3.85 38.84 4318 4318 MS2 21/24 Linfeng_091811_SIN3A_7.raw IPI:IPI00011857.1 559 61.5 7.50 Chromatin assembly factor 1 subunit B 1.97 1 1 24.07 1.97 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AIVEFLSNLAR IPI:IPI00011857.1 1 1 CID 61.41 3.68 1.00 1 2 616.85486 1232.70244 2.13 44.02 10296 10296 MS2 16/20 Linfeng_081211_IgG_4.raw IPI:IPI00012340.1 221 25.5 8.65 "Splicing factor, arginine/serine-rich 9" 5.43 1 1 29.28 5.43 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EAGDVcYADVQK IPI:IPI00012340.1 1 1 CID C6(Carbamidomethyl) 57.70 3.81 1.00 1 2 677.80011 1354.59294 -1.09 23.86 4352 4352 MS2 16/22 Linfeng_081211_IgG_8.raw IPI:IPI00013774.1 482 55.1 5.48 Histone deacetylase 1 39.42 61 10 11.40 2.49 1 1 718.86 39.42 60 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 84.16 7.90 1.00 1 3 745.02087 2233.04807 -3.30 29.45 3332 3332 MS2 34/72 Linfeng_091811_SIN3A_4.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 159.55 7.79 1.00 1 3 1079.83374 3237.48667 -0.07 52.86 6263 6263 MS2 35/116 Linfeng_091811_SIN3A_6.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 146.99 7.77 1.00 1 4 810.12732 3237.48745 0.17 52.63 6183 6183 MS2 42/174 Linfeng_091811_SIN3A_4.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 150.51 7.60 1.00 1 3 1079.83313 3237.48484 -0.63 52.58 6177 6177 MS2 41/116 Linfeng_091811_SIN3A_4.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 92.98 7.36 1.00 1 3 745.02112 2233.04880 -2.97 29.40 3427 3427 MS2 31/72 Linfeng_091811_SIN3A_5.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 137.17 7.24 1.00 1 3 1079.83447 3237.48886 0.61 52.87 6056 6056 MS2 37/116 Linfeng_091811_SIN3A_7.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 58.23 7.11 1.00 1 3 745.02106 2233.04862 -3.06 29.51 3323 3323 MS2 35/72 Linfeng_091811_SIN3A_6.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 98.75 7.03 1.00 1 3 745.02179 2233.05082 -2.07 29.44 3301 3301 MS2 30/72 Linfeng_091811_SIN3A_3.raw High VMEmFQPSAVVLQcGSDSLSGDR IPI:IPI00013774.1 1 1 CID "M4(Oxidation), C14(Carbamidomethyl)" 76.51 6.98 1.00 1 3 843.71582 2529.13291 -3.58 38.56 4516 4516 MS2 39/88 Linfeng_091811_SIN3A_4.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 80.21 6.95 1.00 1 3 750.34918 2249.03299 -7.72 26.04 2967 2967 MS2 33/72 Linfeng_091811_SIN3A_5.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 74.98 6.92 1.00 1 3 745.02112 2233.04880 -2.97 29.39 3283 3283 MS2 32/72 Linfeng_091811_SIN3A_1.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 90.20 6.86 1.00 1 3 750.34857 2249.03116 -8.53 26.19 2869 2869 MS2 36/72 Linfeng_091811_SIN3A_6.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 76.21 6.75 1.00 1 3 750.34888 2249.03208 -8.13 26.10 2875 2875 MS2 36/72 Linfeng_091811_SIN3A_4.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 71.56 6.68 1.00 1 3 745.02087 2233.04807 -3.30 29.48 3096 3096 MS2 33/72 Linfeng_091811_SIN3A_7.raw High VMEmFQPSAVVLQcGSDSLSGDR IPI:IPI00013774.1 1 1 CID "M4(Oxidation), C14(Carbamidomethyl)" 79.62 6.49 1.00 1 3 843.71466 2529.12943 -4.95 38.53 4651 4651 MS2 38/88 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 92.77 6.47 1.00 1 3 750.35260 2249.04325 -3.16 27.47 3061 3061 MS2 31/72 Linfeng_091811_SIN3A_4.raw High VcYYYDGDVGNYYYGQGHPmKPHR IPI:IPI00013774.1 3 1 CID "C2(Carbamidomethyl), M20(Oxidation)" 200.88 6.45 1.00 1 4 739.56909 2955.25454 -2.33 28.77 3241 3241 MS2 42/138 Linfeng_091811_SIN3A_4.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 148.41 6.44 1.00 1 4 810.12750 3237.48818 0.40 52.75 6479 6479 MS2 43/174 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 91.16 6.39 1.00 1 3 750.35132 2249.03940 -4.87 29.54 3445 3445 MS2 37/72 Linfeng_091811_SIN3A_5.raw High VmEmFQPSAVVLQcGSDSLSGDR IPI:IPI00013774.1 1 1 CID "M2(Oxidation), M4(Oxidation), C14(Carbamidomethyl)" 126.44 6.39 1.00 1 2 1273.06775 2545.12822 -3.40 36.68 4274 4274 MS2 24/44 Linfeng_091811_SIN3A_4.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 144.36 6.13 1.00 1 3 1079.83582 3237.49289 1.85 52.56 6458 6458 MS2 29/116 Linfeng_091811_SIN3A_5.raw High KVcYYYDGDVGNYYYGQGHPmKPHR IPI:IPI00013774.1 3 1 CID "C3(Carbamidomethyl), M21(Oxidation)" 85.11 6.08 1.00 1 4 771.59082 3083.34145 -4.84 26.95 2991 2991 MS2 42/144 Linfeng_091811_SIN3A_4.raw High VcYYYDGDVGNYYYGQGHPmKPHR IPI:IPI00013774.1 3 1 CID "C2(Carbamidomethyl), M20(Oxidation)" 181.87 6.04 1.00 1 4 739.56775 2955.24917 -4.14 28.65 3325 3325 MS2 36/138 Linfeng_091811_SIN3A_5.raw High SFNLPmLMLGGGGYTIR IPI:IPI00013774.1 1 1 CID M6(Oxidation) 104.16 6.03 1.00 1 2 921.96399 1842.92070 -1.89 46.44 5683 5683 MS2 23/32 Linfeng_091811_SIN3A_5.raw High SFNLPmLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID "M6(Oxidation), M8(Oxidation)" 121.80 5.80 1.00 1 2 929.95819 1858.90911 -5.38 43.09 5256 5256 MS2 24/32 Linfeng_091811_SIN3A_5.raw High SFNLPMLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID M8(Oxidation) 87.60 5.79 1.00 1 3 614.97827 1842.92026 -2.13 46.19 5652 5652 MS2 30/64 Linfeng_091811_SIN3A_5.raw High SFNLPmLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID "M6(Oxidation), M8(Oxidation)" 118.14 5.73 1.00 1 2 929.96161 1858.91594 -1.70 42.96 5085 5085 MS2 25/32 Linfeng_091811_SIN3A_4.raw High VcYYYDGDVGNYYYGQGHPMKPHR IPI:IPI00013774.1 3 1 CID C2(Carbamidomethyl) 76.48 5.59 1.00 1 4 735.57104 2939.26235 -1.41 29.63 3357 3357 MS2 43/138 Linfeng_091811_SIN3A_4.raw High SFNLPmLMLGGGGYTIR IPI:IPI00013774.1 1 1 CID M6(Oxidation) 13.45 5.52 1.00 1 3 614.97797 1842.91935 -2.63 46.56 5698 5698 MS2 27/64 Linfeng_091811_SIN3A_5.raw High SFNLPMLMLGGGGYTIR IPI:IPI00013774.1 1 1 CID 43.90 5.51 1.00 1 3 609.64758 1826.92820 -0.59 49.45 6066 6066 MS2 30/64 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 95.31 5.41 1.00 1 2 1125.02271 2249.03813 -5.43 26.31 2899 2899 MS2 22/36 Linfeng_091811_SIN3A_4.raw High DGIDDESYEAIFKPVMSK IPI:IPI00013774.1 1 1 CID 121.13 5.23 1.00 1 2 1022.48053 2043.95378 -2.09 40.65 4785 4785 MS2 20/34 Linfeng_091811_SIN3A_4.raw High VcYYYDGDVGNYYYGQGHPMKPHR IPI:IPI00013774.1 3 1 CID C2(Carbamidomethyl) 146.54 5.21 1.00 1 4 735.57013 2939.25869 -2.66 29.52 3443 3443 MS2 46/138 Linfeng_091811_SIN3A_5.raw High FNVGEDcPVFDGLFEFcQLSTGGSVASAVK IPI:IPI00013774.1 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 30.60 5.20 1.00 1 3 1079.83435 3237.48850 0.50 52.95 6137 6137 MS2 23/116 Linfeng_091811_SIN3A_8.raw High SFNLPmLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID "M6(Oxidation), M8(Oxidation)" 129.37 5.12 1.00 1 2 929.96112 1858.91496 -2.23 43.27 5104 5104 MS2 23/32 Linfeng_091811_SIN3A_6.raw High VcYYYDGDVGNYYYGQGHPmKPHR IPI:IPI00013774.1 3 1 CID "C2(Carbamidomethyl), M20(Oxidation)" 112.27 5.08 1.00 1 3 985.75647 2955.25486 -2.22 28.88 3255 3255 MS2 25/92 Linfeng_091811_SIN3A_4.raw High mLPHAPGVQmQAIPEDAIPEESGDEDEDDPDKR IPI:IPI00013774.1 1 1 CID "M1(Oxidation), M10(Oxidation)" 130.02 4.98 1.00 1 4 916.65387 3663.59365 -3.46 30.99 3538 3538 MS2 38/192 Linfeng_091811_SIN3A_4.raw High DGIDDESYEAIFKPVmSK IPI:IPI00013774.1 1 1 CID M16(Oxidation) 100.34 4.94 1.00 1 2 1030.47607 2059.94487 -3.93 37.91 4433 4433 MS2 17/34 Linfeng_091811_SIN3A_4.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 25.09 4.90 1.00 1 3 536.61414 1607.82785 -5.25 35.69 4271 4271 MS2 21/48 Linfeng_091811_SIN3A_5.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 15.15 4.87 1.00 1 3 541.94653 1623.82505 -3.80 35.09 3832 3832 MS2 21/48 Linfeng_091811_SIN3A_7.raw High LHISPSNmTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID M8(Oxidation) 19.29 4.84 1.00 1 3 750.35254 2249.04306 -3.24 28.72 3234 3234 MS2 22/72 Linfeng_091811_SIN3A_4.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 16.57 4.81 1.00 1 3 536.61438 1607.82859 -4.80 36.04 3984 3984 MS2 22/48 Linfeng_091811_SIN3A_10.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 72.56 4.78 1.00 1 2 812.41693 1623.82659 -2.85 35.06 4064 4064 MS2 20/24 Linfeng_091811_SIN3A_4.raw High SFNLPmLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID "M6(Oxidation), M8(Oxidation)" 42.73 4.77 1.00 1 3 620.30951 1858.91397 -2.76 42.81 5065 5065 MS2 32/64 Linfeng_091811_SIN3A_4.raw High LHISPSNMTNQNTNEYLEK IPI:IPI00013774.1 1 1 CID 77.55 4.72 1.00 1 2 1117.02820 2233.04912 -2.83 29.66 3361 3361 MS2 20/36 Linfeng_091811_SIN3A_4.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 24.21 4.70 1.00 1 3 536.61505 1607.83060 -3.55 35.96 4182 4182 MS2 22/48 Linfeng_091811_SIN3A_4.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 73.80 4.69 1.00 1 2 812.41565 1623.82402 -4.43 35.03 4182 4182 MS2 20/24 Linfeng_091811_SIN3A_5.raw High SFNLPMLMLGGGGYTIR IPI:IPI00013774.1 1 1 CID 37.61 4.69 1.00 1 3 609.64667 1826.92545 -2.09 49.33 5854 5854 MS2 28/64 Linfeng_091811_SIN3A_4.raw High SFNLPMLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID M8(Oxidation) 39.69 4.68 1.00 1 3 614.97833 1842.92044 -2.03 46.24 5474 5474 MS2 31/64 Linfeng_091811_SIN3A_6.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 52.76 4.68 1.00 1 3 541.94678 1623.82578 -3.35 34.97 4052 4052 MS2 21/48 Linfeng_091811_SIN3A_4.raw High DGIDDESYEAIFKPVmSK IPI:IPI00013774.1 1 1 CID M16(Oxidation) 106.16 4.62 1.00 1 2 1030.47656 2059.94585 -3.46 37.83 4558 4558 MS2 15/34 Linfeng_091811_SIN3A_5.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 11.87 4.51 1.00 1 3 536.61469 1607.82950 -4.23 36.08 3961 3961 MS2 20/48 Linfeng_091811_SIN3A_7.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 34.88 4.49 1.00 1 3 541.94672 1623.82560 -3.46 34.98 4041 4041 MS2 21/48 Linfeng_091811_SIN3A_6.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 16.19 4.48 1.00 1 3 541.94659 1623.82523 -3.69 34.94 4027 4027 MS2 20/48 Linfeng_091811_SIN3A_3.raw High SFNLPMLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID M8(Oxidation) 53.35 4.31 1.00 1 3 614.97925 1842.92319 -0.54 46.00 5480 5480 MS2 30/64 Linfeng_091811_SIN3A_4.raw High SFNLPmLmLGGGGYTIR IPI:IPI00013774.1 1 1 CID "M6(Oxidation), M8(Oxidation)" 113.29 4.29 1.00 1 3 620.30817 1858.90995 -4.92 43.08 5254 5254 MS2 34/64 Linfeng_091811_SIN3A_5.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 104.27 4.28 1.00 1 2 687.81787 1374.62847 -2.94 33.73 3893 3893 MS2 18/22 Linfeng_091811_SIN3A_4.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 98.92 4.24 1.00 1 2 687.81763 1374.62798 -3.29 33.91 3747 3747 MS2 18/22 Linfeng_091811_SIN3A_8.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 98.36 4.20 1.00 1 2 687.81732 1374.62737 -3.74 33.82 3892 3892 MS2 19/22 Linfeng_091811_SIN3A_6.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 100.60 4.12 1.00 1 2 687.81738 1374.62749 -3.65 33.68 3851 3851 MS2 18/22 Linfeng_091811_SIN3A_1.raw High YGEYFPGTGDLR 4 0 CID 59.33 3.98 1.00 1 2 687.81873 1374.63017 -1.69 34.22 7446 7446 MS2 16/22 Linfeng_081211_IgG_5.raw IPI:IPI00015838.3 379 43.6 9.54 Cell growth-regulating nucleolar protein 10.29 3 2 8.21 3.69 1 1 5.86 6.60 1 1 19.54 6.60 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VHNESILDQVWNIFSEASNSEPVNK IPI:IPI00015838.3 1 1 CID 83.50 6.94 1.00 1 3 952.79932 2856.38340 1.19 53.49 6563 6563 MS2 31/96 Linfeng_091811_SIN3A_5.raw High VHNESILDQVWNIFSEASNSEPVNK 1 0 CID 41.42 5.86 1.00 1 3 952.79590 2856.37314 -2.40 53.10 6364 6364 MS2 27/96 Linfeng_091611_rIgG_5.raw High ELLEQISAFDNVPR IPI:IPI00015838.3 1 1 CID 55.82 4.21 1.00 1 2 815.92468 1630.84209 -0.92 40.95 9469 9469 MS2 18/26 Linfeng_081211_IgG_5.raw IPI:IPI00016513.5 200 22.5 8.38 Ras-related protein Rab-10 11.00 2 2 19.29 5.50 1 1 15.87 5.50 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AFLTLAEDILR IPI:IPI00016513.5 1 1 CID 58.80 4.14 1.00 1 2 631.35974 1261.71221 -2.32 47.90 5523 5523 MS2 17/20 Linfeng_091811_SIN3A_8.raw High LQIWDTAGQER 45 0 CID 39.08 3.55 1.00 3 2 658.83282 1316.65837 -0.78 32.67 7215 7215 MS2 15/20 Linfeng_081211_IgG_8.raw IPI:IPI00019046.4 420 46.9 8.54 Isoform 1 of Pre-mRNA-splicing factor RBM22 4.52 1 1 23.28 4.52 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NVcQTcLLDLEYGLPIQVR IPI:IPI00019046.4 1 1 CID "C3(Carbamidomethyl), C6(Carbamidomethyl)" 58.68 4.87 1.00 1 3 764.38898 2291.15238 0.02 45.38 10649 10649 MS2 22/72 Linfeng_081211_IgG_5.raw IPI:IPI00021700.3 261 28.8 4.69 Proliferating cell nuclear antigen 7.28 1 1 16.87 7.28 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AEDNADTLALVFEAPNQEK IPI:IPI00021700.3 1 1 CID 24.90 4.72 1.00 1 3 692.33447 2074.98886 -1.93 40.81 9758 9758 MS2 22/72 Linfeng_081211_IgG_7.raw IPI:IPI00024167.1 851 98.7 5.11 ESF1 homolog 1.88 1 1 31.60 1.88 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YYYAVVDcDSPETASK IPI:IPI00024167.1 1 1 CID C8(Carbamidomethyl) 128.87 5.61 1.00 1 2 934.40656 1867.80583 0.17 31.38 6772 6772 MS2 21/30 Linfeng_081211_IgG_3.raw IPI:IPI00024662.1 191 22.2 5.86 Chromobox protein homolog 5 5.76 1 1 22.13 5.76 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SNFSNSADDIK IPI:IPI00024662.1 1 1 CID 59.96 3.75 1.00 1 2 599.27087 1197.53447 -3.17 22.81 4027 4027 MS2 16/20 Linfeng_081211_IgG_8.raw IPI:IPI00025176.1 238 26.7 7.24 Survival of motor neuron-related-splicing factor 30 4.20 1 1 7.53 4.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLQEVIELTK IPI:IPI00025176.1 1 1 CID 20.89 3.81 1.00 1 2 594.32983 1187.65239 0.45 39.80 9408 9408 MS2 15/18 Linfeng_081211_IgG_7.raw IPI:IPI00026219.4 1443 160.8 6.40 Cleavage and polyadenylation specificity factor subunit 1 1.18 1 1 15.32 1.18 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLVDSSFGQPTTQGEAR IPI:IPI00026219.4 1 1 CID 42.90 4.06 1.00 1 2 896.44751 1791.88774 0.27 31.48 6175 6175 MS2 14/32 Linfeng_081211_IgG_2.raw IPI:IPI00026271.5 151 16.3 10.05 40S ribosomal protein S14 22.52 3 2 19.37 8.61 1 1 19.56 22.52 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ADRDESSPYAAmLAAQDVAQR IPI:IPI00026271.5 1 1 CID M12(Oxidation) 83.55 5.88 1.00 1 3 761.02148 2281.04990 -0.69 29.44 2971 2971 MS2 32/80 Linfeng_091611_rIgG_10.raw High IEDVTPIPSDSTR IPI:IPI00026271.5 1 1 CID 63.32 4.39 1.00 1 2 715.36005 1429.71282 -2.91 27.73 2747 2747 MS2 14/24 Linfeng_091611_rIgG_10.raw High IEDVTPIPSDSTR 1 0 CID 94.61 4.07 1.00 1 2 715.36066 1429.71404 -2.06 28.33 5561 5561 MS2 16/24 Linfeng_081211_IgG_10.raw IPI:IPI00027019.2 134 15.1 7.66 Proline-rich protein 4 10.45 1 1 4.84 10.45 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FPSVSLQEASSFFR IPI:IPI00027019.2 1 1 CID 105.25 4.84 1.00 1 2 801.40161 1601.79595 0.03 44.72 10474 10474 MS2 19/26 Linfeng_081211_IgG_5.raw IPI:IPI00027448.3 103 11.4 9.64 "ATP synthase subunit g, mitochondrial" 10.68 1 1 13.91 10.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IVNSAQTGSFK IPI:IPI00027448.3 1 1 CID 22.44 3.79 1.00 1 2 576.30621 1151.60515 -0.36 21.95 3677 3677 MS2 15/20 Linfeng_081211_IgG_10.raw IPI:IPI00028517.1 237 26.6 7.88 Ras-related protein Rab-33A 8.44 2 1 64.91 8.44 1 1 45.48 8.44 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TEATIGVDFREKTVEIEGEK 1 0 CID 1.00 4.67 1.00 1 3 751.04785 2251.12900 -7.26 42.39 5076 5076 MS2 15/76 Linfeng_091611_rIgG_4.raw High TEATIGVDFREKTVEIEGEK IPI:IPI00028517.1 1 1 CID 3.96 3.76 1.00 1 2 1126.06897 2251.13066 -6.52 38.47 8763 8763 MS2 9/38 Linfeng_081211_IgG_5.raw IPI:IPI00028980.2 1524 170.4 7.31 Unhealthy ribosome biogenesis protein 2 homolog 1.57 2 2 33.62 0.79 1 1 31.77 0.79 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GEIAQNLLSLVK IPI:IPI00028980.2 1 1 CID 61.16 4.42 1.00 1 2 642.88025 1284.75322 0.76 42.82 4911 4911 MS2 17/22 Linfeng_091611_rIgG_2.raw High EGLLDQQQGDVK IPI:IPI00028980.2 1 1 CID 48.92 3.92 1.00 1 2 665.33398 1329.66069 -2.90 28.07 5234 5234 MS2 16/22 Linfeng_081211_IgG_2.raw IPI:IPI00031508.1 1220 139.2 8.32 ATP-dependent RNA helicase DHX8 0.98 1 1 48.45 0.98 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FEDcTSPETVIK IPI:IPI00031508.1 1 1 CID C4(Carbamidomethyl) 50.31 3.51 1.00 1 2 713.33228 1425.65727 0.41 29.88 5699 5699 MS2 15/22 Linfeng_081211_IgG_2.raw IPI:IPI00061989.3 252 27.6 9.61 Sororin 5.56 2 1 12.41 5.56 1 1 7.22 5.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LETLGSASTSTPGR 2 0 CID 69.22 4.98 1.00 1 2 688.85229 1376.69731 -3.16 24.18 2555 2555 MS2 21/26 Linfeng_091611_rIgG_7.raw High LETLGSASTSTPGR IPI:IPI00061989.3 2 1 CID 59.59 3.95 1.00 1 2 688.85400 1376.70073 -0.68 25.09 4519 4519 MS2 18/26 Linfeng_081211_IgG_7.raw IPI:IPI00063242.5 255 28.0 7.25 "Isoform 2 of Serine/threonine-protein phosphatase PGAM5, mitochondrial" 4.71 2 1 18.78 4.71 1 1 10.23 4.71 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NVESGEEELASK 4 0 CID 75.25 4.12 1.00 1 2 646.30365 1291.60002 -0.97 22.13 2267 2267 MS2 17/22 Linfeng_091611_rIgG_7.raw High NVESGEEELASK IPI:IPI00063242.5 4 1 CID 46.20 3.69 1.00 1 2 646.30341 1291.59953 -1.35 23.19 3910 3910 MS2 16/22 Linfeng_081211_IgG_7.raw IPI:IPI00100656.3 308 36.0 9.45 "Isoform 1 of Trans-2,3-enoyl-CoA reductase" 7.14 2 2 40.76 3.25 1 1 25.43 3.90 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LPVGTTATLYFR IPI:IPI00100656.3 2 1 CID 71.44 4.24 1.00 1 2 669.87250 1338.73772 -2.95 36.43 4384 4384 MS2 18/22 Linfeng_091611_rIgG_8.raw High HYEVEILDAK IPI:IPI00301279.3 2 1 CID 41.24 3.80 1.00 1 2 608.81409 1216.62090 0.02 30.69 6288 6288 MS2 16/18 Linfeng_081211_IgG_7.raw IPI:IPI00104050.3 955 108.6 10.15 Thyroid hormone receptor-associated protein 3 1.26 1 1 78.64 1.26 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GSFSDTGLGDGK IPI:IPI00104050.3 1 1 CID 64.11 3.65 1.00 1 2 570.76190 1140.51653 -0.26 26.72 4821 4821 MS2 18/22 Linfeng_081211_IgG_2.raw IPI:IPI00154975.3 260 29.9 5.73 DnaJ homolog subfamily C member 9 4.23 1 1 11.12 4.23 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISLEDIQAFEK IPI:IPI00154975.3 1 1 CID 55.16 3.57 1.00 1 2 646.84082 1292.67436 0.81 39.51 9315 9315 MS2 16/20 Linfeng_081211_IgG_7.raw IPI:IPI00176642.3 344 39.3 9.29 Serine/threonine-protein kinase 12 15.70 6 4 21.75 4.36 1 1 29.57 8.43 2 2 30.87 11.34 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HFTIDDFEIGRPLGK IPI:IPI00947382.1 4 1 CID 34.98 5.34 1.00 1 3 582.30316 1744.89493 -3.93 36.86 4282 4282 MS2 23/56 Linfeng_091811_SIN3A_6.raw High VmENSSGTPDILTR IPI:IPI00947382.1 4 1 CID M2(Oxidation) 57.34 5.10 1.00 1 2 768.36914 1535.73100 -3.95 27.97 3112 3112 MS2 20/26 Linfeng_091811_SIN3A_6.raw High VmENSSGTPDILTR 4 0 CID M2(Oxidation) 70.08 5.01 1.00 1 2 768.36859 1535.72991 -4.67 27.88 3112 3112 MS2 21/26 Linfeng_091611_rIgG_6.raw High HFTIDDFEIGRPLGK 4 0 CID 88.89 4.68 1.00 1 3 582.30371 1744.89658 -2.98 36.65 4272 4272 MS2 23/56 Linfeng_091611_rIgG_6.raw High IYLILEYAPR IPI:IPI00947382.1 3 1 CID 75.24 4.30 1.00 1 2 625.85938 1250.71147 -2.32 42.37 4990 4990 MS2 16/18 Linfeng_091811_SIN3A_6.raw High FPASVPTGAQDLISK IPI:IPI00176642.3 1 1 CID 24.03 4.22 1.00 1 2 765.91193 1530.81658 0.17 34.90 7803 7803 MS2 17/28 Linfeng_081211_IgG_6.raw IPI:IPI00177381.9 908 105.4 7.03 Pre-mRNA-splicing factor CWC22 homolog 1.21 1 1 56.48 1.21 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LSEETTTSSSR IPI:IPI00177381.9 2 1 CID 66.72 3.93 1.00 1 2 599.28394 1197.56059 1.00 17.05 1996 1996 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00177642.8 531 59.7 5.40 Coiled-coil domain-containing protein 9 2.26 1 1 33.46 2.26 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AELEGVAVTAPR IPI:IPI00177642.8 1 1 CID 56.24 4.35 1.00 1 2 606.83179 1212.65630 -1.69 30.08 6299 6299 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00185801.3 659 72.7 6.10 Isoform 3 of Nuclear valosin-containing protein-like 4.86 3 2 27.82 2.28 1 1 30.19 4.86 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TLLAHAIAGELDLPILK IPI:IPI00185801.3 4 1 CID 71.19 5.03 1.00 1 3 596.69159 1788.06021 -1.58 45.06 5328 5328 MS2 29/64 Linfeng_091811_SIN3A_3.raw High LGTEPTSETQDELQR IPI:IPI00185801.3 6 1 CID 74.44 4.59 1.00 1 2 852.40509 1703.80290 -3.18 24.79 2658 2658 MS2 21/28 Linfeng_091811_SIN3A_3.raw High LGTEPTSETQDELQR 6 0 CID 83.38 4.38 1.00 1 2 852.40668 1703.80608 -1.32 26.15 5039 5039 MS2 17/28 Linfeng_081211_IgG_3.raw IPI:IPI00215719.6 188 21.6 11.72 60S ribosomal protein L18 6.91 1 1 26.75 6.91 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ILTFDQLALDSPK IPI:IPI00215719.6 1 1 CID 53.25 3.77 1.00 1 2 730.90570 1460.80412 3.10 40.63 9646 9646 MS2 16/24 Linfeng_081211_IgG_10.raw IPI:IPI00216237.5 105 12.2 11.59 60S ribosomal protein L36 10.48 1 1 15.78 10.48 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EELSNVLAAMR IPI:IPI00216237.5 1 1 CID 36.26 3.62 1.00 1 2 616.81897 1232.63066 0.20 38.83 9009 9009 MS2 12/20 Linfeng_081211_IgG_10.raw IPI:IPI00216659.1 173 19.7 5.92 Isoform 2 of RNA-binding protein 8A 17.34 4 2 10.07 6.36 1 1 14.42 6.36 1 1 39.75 10.98 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MREDYDSVEQDGDEPGPQR IPI:IPI00216659.1 2 1 CID 64.80 5.75 1.00 1 3 741.64362 2222.91629 -4.18 24.02 2427 2427 MS2 31/72 Linfeng_091811_SIN3A_8.raw High mREDYDSVEQDGDEPGPQR IPI:IPI00216659.1 2 1 CID M1(Oxidation) 73.08 5.67 1.00 1 3 746.97534 2238.91147 -4.04 22.67 2243 2243 MS2 31/72 Linfeng_091811_SIN3A_8.raw High GYTLVEYETYK 2 0 CID 60.10 4.14 1.00 1 2 683.33185 1365.65642 -0.64 32.74 7239 7239 MS2 16/20 Linfeng_081211_IgG_8.raw High GYTLVEYETYK IPI:IPI00216659.1 2 1 CID 54.52 4.08 1.00 1 2 683.33069 1365.65410 -2.34 32.58 3883 3883 MS2 17/20 Linfeng_091611_rIgG_8.raw IPI:IPI00216699.1 663 75.4 6.77 Isoform 2 of Fermitin family homolog 3 2.41 1 1 35.70 2.41 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VFVGEEDPEAESVTLR IPI:IPI00216699.1 2 1 CID 67.07 4.93 1.00 1 2 888.93634 1776.86540 0.15 33.53 7233 7233 MS2 18/30 Linfeng_081211_IgG_4.raw IPI:IPI00217541.3 666 72.4 8.16 ATP-dependent RNA helicase DDX51 1.80 1 1 13.52 1.80 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cLADIVVATPGR IPI:IPI00217541.3 2 1 CID C1(Carbamidomethyl) 54.87 3.58 1.00 1 2 636.34192 1271.67656 -0.90 34.92 8118 8118 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00217686.4 847 96.5 8.40 Putative rRNA methyltransferase 3 2.01 1 1 32.32 2.01 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ILDPEGLALGAVIASSK IPI:IPI00217686.4 1 1 CID 72.31 3.82 1.00 1 2 827.47559 1653.94390 0.99 51.41 9359 9359 MS2 16/32 Linfeng_081211_IgG_1.raw IPI:IPI00218280.3 320 35.2 5.54 Isoform 2 of Replication factor C subunit 2 5.31 1 1 3.82 5.31 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EGNVPNIIIAGPPGTGK IPI:IPI00218280.3 2 1 CID 36.47 3.82 1.00 1 2 817.44818 1633.88909 -1.11 34.81 7773 7773 MS2 14/32 Linfeng_081211_IgG_6.raw IPI:IPI00218388.1 482 51.5 8.47 Isoform 2 of CUGBP Elav-like family member 1 2.07 1 1 7.11 2.07 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GcAFVTFTTR IPI:IPI00218388.1 5 1 CID C2(Carbamidomethyl) 23.42 3.54 1.00 1 2 580.28040 1159.55351 -2.58 33.52 7182 7182 MS2 12/18 Linfeng_081211_IgG_5.raw IPI:IPI00218606.7 143 15.8 10.49 40S ribosomal protein S23 7.69 3 1 16.35 7.69 1 1 7.70 7.69 1 1 12.20 7.69 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VANVSLLALYK 1 0 CID 80.08 4.52 1.00 1 2 595.85864 1190.71001 -3.67 38.51 4399 4399 MS2 18/20 Linfeng_091811_SIN3A_9.raw High VANVSLLALYK 1 0 CID 89.93 4.23 1.00 1 2 595.85870 1190.71013 -3.57 38.16 4073 4073 MS2 18/20 Linfeng_091611_rIgG_10.raw High VANVSLLALYK IPI:IPI00218606.7 1 1 CID 75.25 4.20 1.00 1 2 595.86115 1190.71501 0.53 38.12 8758 8758 MS2 16/20 Linfeng_081211_IgG_10.raw IPI:IPI00218621.2 2108 228.0 5.40 Isoform E of Protein SON 0.66 2 1 49.05 0.66 1 1 54.27 0.66 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AGIEGPLLASDVGR 9 0 CID 48.77 4.61 1.00 1 2 677.86957 1354.73186 -0.54 43.37 7170 7170 MS2 17/26 Linfeng_081211_IgG_1.raw High AGIEGPLLASDVGR IPI:IPI00218621.2 9 1 CID 63.68 4.55 1.00 1 2 677.86719 1354.72710 -4.05 34.35 3940 3940 MS2 18/26 Linfeng_091811_SIN3A_1.raw IPI:IPI00219229.3 102 11.8 4.70 U6 snRNA-associated Sm-like protein LSm3 11.76 1 1 5.21 11.76 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GDGVVLVAPPLR IPI:IPI00219229.3 1 1 CID 35.75 3.56 1.00 1 2 596.85681 1192.70635 1.20 34.80 7699 7699 MS2 12/22 Linfeng_081211_IgG_10.raw IPI:IPI00219317.3 836 99.1 8.00 Crooked neck pre-mRNA splicing factor-like 1 1.44 3 1 44.26 1.44 1 1 11.89 1.44 1 1 9.29 1.44 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVESDAEAEAVR 3 0 CID 80.77 4.66 1.00 1 2 644.82031 1288.63335 -3.62 23.96 2541 2541 MS2 19/22 Linfeng_091811_SIN3A_3.raw High LVESDAEAEAVR 3 0 CID 66.87 4.59 1.00 1 2 644.82220 1288.63713 -0.68 23.66 2041 2041 MS2 18/22 Linfeng_091611_rIgG_3.raw High LVESDAEAEAVR IPI:IPI00219317.3 3 1 CID 62.93 4.36 1.00 1 2 644.82141 1288.63555 -1.91 25.28 4741 4741 MS2 18/22 Linfeng_081211_IgG_3.raw IPI:IPI00219740.3 389 44.6 6.24 Isoform 2 of DNA replication licensing factor MCM7 6.43 3 2 11.48 3.34 1 1 6.31 3.08 1 1 10.47 3.08 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SITVLVEGENTR IPI:IPI00925989.1 4 1 CID 90.63 4.71 1.00 1 2 659.35114 1317.69499 -4.51 30.40 3432 3432 MS2 18/22 Linfeng_091811_SIN3A_3.raw High SEDDESGAGELTR IPI:IPI00219740.3 3 1 CID 81.39 4.29 1.00 1 2 683.29126 1365.57524 -0.94 22.80 3895 3895 MS2 18/24 Linfeng_081211_IgG_3.raw High SITVLVEGENTR 4 0 CID 18.38 4.13 1.00 1 2 659.35175 1317.69621 -3.58 30.18 2901 2901 MS2 15/22 Linfeng_091611_rIgG_3.raw IPI:IPI00220336.1 860 98.0 8.40 Isoform 2 of Exosome component 10 1.63 1 1 35.51 1.63 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NQQPVLPAGLQVPK IPI:IPI00220336.1 2 1 CID 17.79 3.67 1.00 1 2 744.92926 1488.85124 -1.42 34.93 8121 8121 MS2 12/26 Linfeng_081211_IgG_3.raw IPI:IPI00220447.1 113 12.9 9.98 Isoform Short of Transformer-2 protein homolog alpha 12.39 1 1 16.66 12.39 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YGPLSGVNVVYDQR IPI:IPI00220447.1 2 1 CID 58.31 4.08 1.00 1 2 783.89911 1566.79094 -0.12 35.13 7881 7881 MS2 17/26 Linfeng_081211_IgG_6.raw IPI:IPI00221091.9 130 14.8 10.13 40S ribosomal protein S15a 10.77 1 1 23.64 10.77 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HGYIGEFEIIDDHR IPI:IPI00221091.9 1 1 CID 79.64 4.53 1.00 1 3 567.60565 1700.80240 -0.22 33.30 7176 7176 MS2 24/52 Linfeng_081211_IgG_10.raw IPI:IPI00221092.8 146 16.4 10.21 40S ribosomal protein S16 7.53 1 1 33.29 7.53 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GPLQSVQVFGR IPI:IPI00221092.8 3 1 CID 81.93 3.81 1.00 1 2 594.32898 1187.65068 -2.11 34.42 7574 7574 MS2 17/20 Linfeng_081211_IgG_10.raw IPI:IPI00288941.1 579 65.5 9.60 Nuclear receptor coactivator 5 1.73 1 1 47.57 1.73 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High mADEAILQER IPI:IPI00288941.1 1 1 CID M1(Oxidation) 25.54 3.50 1.00 1 2 596.28741 1191.56755 0.06 26.51 4999 4999 MS2 13/18 Linfeng_081211_IgG_4.raw IPI:IPI00289601.10 582 65.5 6.99 Histone deacetylase 2 29.73 44 9 16.09 2.06 1 1 559.41 29.73 43 9 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VMEmYQPSAVVLQcGADSLSGDR IPI:IPI00289601.10 1 1 CID "M4(Oxidation), C14(Carbamidomethyl)" 56.29 7.90 1.00 1 3 843.71503 2529.13053 -4.52 37.41 4503 4503 MS2 37/88 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTPEYmEK IPI:IPI00289601.10 2 1 CID "M8(Oxidation), M17(Oxidation)" 106.96 7.70 1.00 1 3 756.00623 2266.00412 -3.27 23.33 2589 2589 MS2 36/72 Linfeng_091811_SIN3A_5.raw High VmEmYQPSAVVLQcGADSLSGDR IPI:IPI00289601.10 1 1 CID "M2(Oxidation), M4(Oxidation), C14(Carbamidomethyl)" 75.34 7.59 1.00 1 3 849.04675 2545.12571 -4.38 36.13 4204 4204 MS2 34/88 Linfeng_091811_SIN3A_4.raw High LHISPSNmTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID M8(Oxidation) 101.09 7.41 1.00 1 3 750.67303 2250.00455 -5.37 25.77 2930 2930 MS2 34/72 Linfeng_091811_SIN3A_5.raw High LHISPSNMTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID 45.72 7.24 1.00 1 3 745.34991 2234.03519 6.03 30.44 3466 3466 MS2 31/72 Linfeng_091811_SIN3A_4.raw High LHISPSNmTNQNTPEYmEK IPI:IPI00289601.10 2 1 CID "M8(Oxidation), M17(Oxidation)" 108.35 7.21 1.00 1 3 756.00610 2266.00376 -3.44 23.44 2501 2501 MS2 33/72 Linfeng_091811_SIN3A_4.raw High LHISPSNMTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID 97.37 6.96 1.00 1 3 745.34216 2234.01194 -4.38 28.93 3362 3362 MS2 31/72 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID M8(Oxidation) 73.37 6.85 1.00 1 3 750.67371 2250.00656 -4.47 25.92 2850 2850 MS2 34/72 Linfeng_091811_SIN3A_4.raw High LHISPSNmTNQNTPEYmEK IPI:IPI00289601.10 2 1 CID "M8(Oxidation), M17(Oxidation)" 64.79 6.76 1.00 1 3 756.00659 2266.00522 -2.79 23.48 2498 2498 MS2 32/72 Linfeng_091811_SIN3A_6.raw High LHISPSNMTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID 71.17 6.65 1.00 1 3 745.34814 2234.02988 3.66 30.08 3519 3519 MS2 32/72 Linfeng_091811_SIN3A_5.raw High FNVGEDcPVFDGLFEFcQLSTGGSVAGAVK IPI:IPI00289601.10 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 98.54 6.49 1.00 1 4 802.62579 3207.48134 1.56 52.78 6483 6483 MS2 31/174 Linfeng_091811_SIN3A_5.raw High VcYYYDGDIGNYYYGQGHPmKPHR IPI:IPI00289601.10 1 1 CID "C2(Carbamidomethyl), M20(Oxidation)" 122.97 6.38 1.00 1 4 743.07233 2969.26748 -3.23 30.19 3533 3533 MS2 37/138 Linfeng_091811_SIN3A_5.raw High LHISPSNMTNQNTPEYmEK IPI:IPI00289601.10 2 1 CID M17(Oxidation) 76.41 6.36 1.00 1 3 750.67224 2250.00217 -6.42 26.87 3081 3081 MS2 29/72 Linfeng_091811_SIN3A_5.raw High FNVGEDcPVFDGLFEFcQLSTGGSVAGAVK IPI:IPI00289601.10 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 135.06 6.33 1.00 1 3 1069.83179 3207.48081 1.40 52.88 6265 6265 MS2 36/116 Linfeng_091811_SIN3A_6.raw High FNVGEDcPVFDGLFEFcQLSTGGSVAGAVK IPI:IPI00289601.10 2 1 CID "C7(Carbamidomethyl), C17(Carbamidomethyl)" 120.55 6.23 1.00 1 3 1069.83228 3207.48227 1.85 52.57 6459 6459 MS2 31/116 Linfeng_091811_SIN3A_5.raw High TFNLPLLMLGGGGYTIR IPI:IPI00289601.10 2 1 CID 134.24 6.11 1.00 1 2 911.99652 1822.98577 -1.50 51.01 6265 6265 MS2 26/32 Linfeng_091811_SIN3A_5.raw High TFNLPLLmLGGGGYTIR IPI:IPI00289601.10 2 1 CID M8(Oxidation) 86.95 6.05 1.00 1 3 613.66437 1838.97855 -2.64 47.80 5854 5854 MS2 31/64 Linfeng_091811_SIN3A_5.raw High TFNLPLLmLGGGGYTIR IPI:IPI00289601.10 2 1 CID M8(Oxidation) 101.72 5.87 1.00 1 3 613.66516 1838.98093 -1.35 48.04 5699 5699 MS2 32/64 Linfeng_091811_SIN3A_6.raw High LHISPSNmTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID M8(Oxidation) 91.79 5.86 1.00 1 3 750.67365 2250.00638 -4.55 25.96 2842 2842 MS2 29/72 Linfeng_091811_SIN3A_6.raw High LHISPSNMTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID 53.92 5.80 1.00 1 3 745.34973 2234.03464 5.79 29.24 3304 3304 MS2 30/72 Linfeng_091811_SIN3A_4.raw High DGIDDESYGQIFKPIISK IPI:IPI00289601.10 1 1 CID 106.13 5.79 1.00 1 2 1013.00891 2025.01055 -3.48 39.89 4834 4834 MS2 20/34 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID M8(Oxidation) 56.74 5.67 1.00 1 3 750.67957 2250.02414 3.34 26.95 2990 2990 MS2 31/72 Linfeng_091811_SIN3A_4.raw High LHISPSNmTNQNTPEYMEK IPI:IPI00289601.10 2 1 CID M8(Oxidation) 61.74 5.58 1.00 1 3 750.67926 2250.02323 2.93 27.71 3197 3197 MS2 28/72 Linfeng_091811_SIN3A_5.raw High TFNLPLLMLGGGGYTIR IPI:IPI00289601.10 2 1 CID 68.86 5.52 1.00 1 3 608.33337 1822.98557 -1.60 50.89 6249 6249 MS2 30/64 Linfeng_091811_SIN3A_5.raw High LHISPSNmTNQNTPEYmEK IPI:IPI00289601.10 2 1 CID "M8(Oxidation), M17(Oxidation)" 69.35 5.47 1.00 1 3 756.00714 2266.00687 -2.06 23.52 2283 2283 MS2 26/72 Linfeng_091811_SIN3A_7.raw High TFNLPLLmLGGGGYTIR IPI:IPI00289601.10 2 1 CID M8(Oxidation) 44.29 5.41 1.00 1 3 613.66498 1838.98038 -1.65 47.90 5696 5696 MS2 29/64 Linfeng_091811_SIN3A_4.raw High TFNLPLLmLGGGGYTIR IPI:IPI00289601.10 2 1 CID M8(Oxidation) 54.53 5.29 1.00 1 3 613.66492 1838.98020 -1.74 47.76 5679 5679 MS2 30/64 Linfeng_091811_SIN3A_4.raw High TFNLPLLmLGGGGYTIR IPI:IPI00289601.10 2 1 CID M8(Oxidation) 31.18 4.94 1.00 1 3 613.66504 1838.98056 -1.55 48.14 5492 5492 MS2 27/64 Linfeng_091811_SIN3A_7.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 25.09 4.90 1.00 1 3 536.61414 1607.82785 -5.25 35.69 4271 4271 MS2 21/48 Linfeng_091811_SIN3A_5.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 15.15 4.87 1.00 1 3 541.94653 1623.82505 -3.80 35.09 3832 3832 MS2 21/48 Linfeng_091811_SIN3A_7.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 16.57 4.81 1.00 1 3 536.61438 1607.82859 -4.80 36.04 3984 3984 MS2 22/48 Linfeng_091811_SIN3A_10.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 72.56 4.78 1.00 1 2 812.41693 1623.82659 -2.85 35.06 4064 4064 MS2 20/24 Linfeng_091811_SIN3A_4.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 24.21 4.70 1.00 1 3 536.61505 1607.83060 -3.55 35.96 4182 4182 MS2 22/48 Linfeng_091811_SIN3A_4.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 73.80 4.69 1.00 1 2 812.41565 1623.82402 -4.43 35.03 4182 4182 MS2 20/24 Linfeng_091811_SIN3A_5.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 52.76 4.68 1.00 1 3 541.94678 1623.82578 -3.35 34.97 4052 4052 MS2 21/48 Linfeng_091811_SIN3A_4.raw High MTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID 11.87 4.51 1.00 1 3 536.61469 1607.82950 -4.23 36.08 3961 3961 MS2 20/48 Linfeng_091811_SIN3A_7.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 34.88 4.49 1.00 1 3 541.94672 1623.82560 -3.46 34.98 4041 4041 MS2 21/48 Linfeng_091811_SIN3A_6.raw High mTHNLLLNYGLYR IPI:IPI00013774.1;IPI:IPI00289601.10 5 2 CID M1(Oxidation) 16.19 4.48 1.00 1 3 541.94659 1623.82523 -3.69 34.94 4027 4027 MS2 20/48 Linfeng_091811_SIN3A_3.raw High QQTDmAVNWAGGLHHAK IPI:IPI00289601.10 2 1 CID M5(Oxidation) 29.48 4.36 1.00 1 3 627.29749 1879.87790 -4.77 24.99 2819 2819 MS2 25/64 Linfeng_091811_SIN3A_5.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 104.27 4.28 1.00 1 2 687.81787 1374.62847 -2.94 33.73 3893 3893 MS2 18/22 Linfeng_091811_SIN3A_4.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 98.92 4.24 1.00 1 2 687.81763 1374.62798 -3.29 33.91 3747 3747 MS2 18/22 Linfeng_091811_SIN3A_8.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 98.36 4.20 1.00 1 2 687.81732 1374.62737 -3.74 33.82 3892 3892 MS2 19/22 Linfeng_091811_SIN3A_6.raw High YGEYFPGTGDLR IPI:IPI00013774.1;IPI:IPI00289601.10 4 2 CID 100.60 4.12 1.00 1 2 687.81738 1374.62749 -3.65 33.68 3851 3851 MS2 18/22 Linfeng_091811_SIN3A_1.raw High YGEYFPGTGDLR 4 0 CID 59.33 3.98 1.00 1 2 687.81873 1374.63017 -1.69 34.22 7446 7446 MS2 16/22 Linfeng_081211_IgG_5.raw IPI:IPI00291560.4 322 34.7 7.21 Isoform 1 of Arginase-1 5.59 1 1 60.80 5.59 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TGLLSGLDImEVNPSLGK IPI:IPI00291560.4 2 1 CID M10(Oxidation) 31.89 3.83 1.00 1 2 930.49414 1859.98100 1.40 41.73 9762 9762 MS2 15/34 Linfeng_081211_IgG_4.raw IPI:IPI00294159.3 311 34.0 9.89 "Tricarboxylate transport protein, mitochondrial" 3.86 1 1 31.92 3.86 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GLSSLLYGSIPK IPI:IPI00294159.3 1 1 CID 29.85 4.06 1.00 1 2 617.85651 1234.70574 1.23 40.60 9685 9685 MS2 15/22 Linfeng_081211_IgG_7.raw IPI:IPI00294229.6 373 40.8 9.26 RNA 3'-terminal phosphate cyclase-like protein 8.04 3 2 30.26 4.02 1 1 30.76 4.02 1 1 28.37 4.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVTNDQVDPSVDVLK IPI:IPI00294229.6 1 1 CID 86.79 5.39 1.00 1 2 793.40680 1585.80632 -0.35 31.82 6711 6711 MS2 19/28 Linfeng_081211_IgG_6.raw High GVTNDQVDPSVDVLK 1 0 CID 88.69 5.11 1.00 1 2 793.40503 1585.80278 -2.58 31.63 3607 3607 MS2 20/28 Linfeng_091811_SIN3A_6.raw High VLLGPLSPYTIEFLR IPI:IPI00647354.1 3 1 CID 122.97 4.28 1.00 1 2 859.49738 1717.98747 -0.77 49.38 5884 5884 MS2 21/28 Linfeng_091611_rIgG_6.raw IPI:IPI00297241.4 2271 254.2 6.47 Nucleolar pre-ribosomal-associated protein 1 1.76 5 3 49.46 0.48 1 1 57.05 0.75 2 1 49.88 1.28 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TAADDDLVADLVVNILK 1 0 CID 68.83 5.47 1.00 1 3 595.65985 1784.96500 0.49 55.05 6458 6458 MS2 33/64 Linfeng_091611_rIgG_1.raw High TAADDDLVADLVVNILK 1 0 CID 64.24 4.64 1.00 1 3 595.65973 1784.96463 0.29 55.06 6369 6369 MS2 30/64 Linfeng_091611_rIgG_2.raw High TAADDDLVADLVVNILK IPI:IPI00297241.4 1 1 CID 65.49 4.54 1.00 1 3 595.65979 1784.96482 0.39 55.09 6503 6503 MS2 29/64 Linfeng_091811_SIN3A_1.raw High ISTINILLSTLK IPI:IPI00297241.4 1 1 CID 58.39 4.17 1.00 1 2 658.41205 1315.81682 -2.10 47.15 5587 5587 MS2 18/22 Linfeng_091811_SIN3A_1.raw High STVENFGQLGR IPI:IPI00297241.4 1 1 CID 40.49 3.80 1.00 1 2 604.30737 1207.60747 0.69 31.03 6036 6036 MS2 15/20 Linfeng_081211_IgG_2.raw IPI:IPI00297477.3 255 28.4 8.62 U2 small nuclear ribonucleoprotein A' 21.96 4 3 34.57 6.67 1 1 38.01 21.96 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IPVIENLGATLDQFDAIDFSDNEIR IPI:IPI00297477.3 3 1 CID 131.07 7.15 1.00 1 3 935.80627 2805.40427 3.56 52.59 6025 6025 MS2 29/96 Linfeng_091811_SIN3A_7.raw High LTAELIEQAAQYTNAVR IPI:IPI00297477.3 3 1 CID 113.85 6.36 1.00 1 3 631.00031 1890.98636 -3.00 41.95 4717 4717 MS2 34/64 Linfeng_091811_SIN3A_7.raw High LTAELIEQAAQYTNAVR 3 0 CID 92.98 5.77 1.00 1 3 631.00171 1890.99057 -0.78 41.56 10008 10008 MS2 26/64 Linfeng_081211_IgG_7.raw High NAIANASTLAEVER IPI:IPI00297477.3 1 1 CID 99.34 4.87 1.00 1 2 729.87854 1458.74980 -3.41 31.19 3326 3326 MS2 21/26 Linfeng_091811_SIN3A_7.raw IPI:IPI00297572.5 1486 171.3 6.37 Intron-binding protein aquarius 2.15 2 2 41.67 0.87 1 1 25.85 1.28 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDVAVQIISNIYHNFPEQR IPI:IPI00297572.5 1 1 CID 73.74 5.37 1.00 1 3 748.71783 2244.13895 -0.84 47.77 5530 5530 MS2 31/72 Linfeng_091611_rIgG_2.raw High DADVEDEDTEEAK IPI:IPI00297572.5 1 1 CID 72.65 3.56 1.00 1 2 733.29504 1465.58281 1.00 20.79 2957 2957 MS2 18/24 Linfeng_081211_IgG_2.raw IPI:IPI00300052.1 600 64.9 7.74 "Keratin, type II cuticular Hb4" 4.83 10 2 122.21 3.00 1 1 522.39 1.83 9 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 51.69 4.20 1.00 1 2 632.34930 1263.69133 -2.41 39.60 4094 4094 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 52.27 4.19 1.00 1 2 632.34900 1263.69072 -2.90 39.63 4717 4717 MS2 17/20 Linfeng_091611_rIgG_4.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 69.77 4.18 1.00 1 2 632.34918 1263.69109 -2.61 40.13 4725 4725 MS2 17/20 Linfeng_091611_rIgG_6.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.54 4.16 1.00 1 2 632.34900 1263.69072 -2.90 39.91 4540 4540 MS2 17/20 Linfeng_091611_rIgG_2.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.75 4.13 1.00 1 2 632.34851 1263.68974 -3.67 40.65 4228 4228 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.95 4.11 1.00 1 2 632.34729 1263.68730 -5.60 39.89 4555 4555 MS2 17/20 Linfeng_091611_rIgG_1.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.57 4.11 1.00 1 2 632.35034 1263.69341 -0.77 57.58 6839 6839 MS2 17/20 Linfeng_091611_rIgG_5.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 47.39 4.11 1.00 1 2 632.34882 1263.69036 -3.19 42.78 4500 4500 MS2 17/20 Linfeng_091611_rIgG_3.raw High LGLDIEIATYR IPI:IPI00032541.1;IPI:IPI00182655.8;IPI:IPI00297795.4 10 3 CID 46.31 4.09 1.00 1 2 632.35034 1263.69341 -0.77 52.52 6295 6295 MS2 15/20 Linfeng_091611_rIgG_5.raw High GGLVcGPEPLVAGSTLSR IPI:IPI00300052.1 1 1 CID C5(Carbamidomethyl) 34.65 3.62 1.00 1 2 885.46606 1769.92485 1.87 36.77 7682 7682 MS2 12/34 Linfeng_081211_IgG_2.raw IPI:IPI00300376.5 693 76.6 5.86 Protein-glutamine gamma-glutamyltransferase E 2.60 1 1 51.11 2.60 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIILDNPTLTLEVLNEAR IPI:IPI00300376.5 1 1 CID 56.32 4.52 1.00 1 3 680.37335 2039.10550 1.71 49.05 11760 11760 MS2 23/68 Linfeng_081211_IgG_8.raw IPI:IPI00302238.3 560 63.1 4.94 Protein AATF 8.75 4 3 29.43 2.50 1 1 25.17 3.04 1 1 27.03 6.25 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLVGLQEELLFQYPDTR IPI:IPI00302238.3 1 1 CID 40.60 5.52 1.00 1 3 670.01593 2008.03324 -2.70 45.57 5393 5393 MS2 33/64 Linfeng_091811_SIN3A_3.raw High SLVGLQEELLFQYPDTR 1 0 CID 65.41 5.26 1.00 1 3 670.01538 2008.03159 -3.52 45.37 4827 4827 MS2 31/64 Linfeng_091611_rIgG_3.raw High DLDEEIFDDDDFYHQLLR IPI:IPI00302238.3 1 1 CID 91.87 4.46 1.00 1 3 766.67651 2298.01499 -2.09 46.93 5566 5566 MS2 26/68 Linfeng_091811_SIN3A_3.raw High TSSLDPNDQVAmGR IPI:IPI00302238.3 1 1 CID M12(Oxidation) 53.47 3.97 1.00 1 2 753.84497 1506.68266 -1.80 24.32 4415 4415 MS2 14/26 Linfeng_081211_IgG_3.raw IPI:IPI00304932.2 456 50.7 9.42 Ribosomal RNA-processing protein 8 3.51 1 1 24.91 3.51 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YLNEQLYSGPSSAAQR IPI:IPI00304932.2 1 1 CID 105.58 6.31 1.00 1 2 892.43286 1783.85845 -1.43 29.66 5812 5812 MS2 20/30 Linfeng_081211_IgG_5.raw IPI:IPI00328113.3 2871 312.1 4.93 Fibrillin-1 0.66 1 1 11.54 0.66 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MIPSLcTHGKcRNTIGSFK IPI:IPI00328113.3 1 1 CID "C6(Carbamidomethyl), C11(Carbamidomethyl)" 1.00 3.60 1.00 1 2 1104.05652 2207.10576 7.91 40.43 9320 9320 MS2 4/36 Linfeng_081211_IgG_5.raw IPI:IPI00328715.4 582 63.8 9.32 Protein LYRIC 2.06 1 1 25.39 2.06 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TELGLDLGLEPK IPI:IPI00328715.4 1 1 CID 29.21 3.48 1.00 1 2 642.85590 1284.70452 -0.09 38.57 8812 8812 MS2 12/22 Linfeng_081211_IgG_4.raw IPI:IPI00387095.1 108 11.9 8.85 Ig kappa chain V-I region Ka 14.81 1 1 23.96 14.81 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLIYAASSLETGVPSR IPI:IPI00387095.1 1 1 CID 27.77 3.69 1.00 1 2 838.96521 1676.92314 0.78 37.96 8704 8704 MS2 16/30 Linfeng_081211_IgG_10.raw IPI:IPI00387096.1 108 12.1 8.81 Ig kappa chain V-I region Kue 10.19 1 1 10.39 10.19 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASTLETGVPSR IPI:IPI00387096.1 1 1 CID 40.33 3.61 1.00 1 2 559.29517 1117.58306 -1.59 23.19 4121 4121 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00387101.1 108 11.8 6.00 Ig kappa chain V-I region Scw 31.48 2 2 23.60 14.81 1 1 24.16 16.67 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIQmTQSPSSLSASVGDR IPI:IPI00384398.1 12 1 CID M4(Oxidation) 41.42 4.43 1.00 1 3 632.29596 1894.87333 -4.15 28.32 3007 3007 MS2 28/68 Linfeng_091811_SIN3A_8.raw High LLIYGASTLETGVPSR IPI:IPI00387101.1 1 1 CID 14.79 3.64 1.00 1 2 838.96667 1676.92607 2.53 40.11 9596 9596 MS2 14/30 Linfeng_081211_IgG_8.raw IPI:IPI00387105.1 109 11.9 6.57 Ig kappa chain V-I region Mev 14.68 1 1 4.07 14.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLIFDTSNLQSGVPSR IPI:IPI00387105.1 1 1 CID 29.01 4.07 1.00 1 2 873.97137 1746.93547 -1.76 35.64 8242 8242 MS2 16/30 Linfeng_081211_IgG_8.raw IPI:IPI00387106.1 112 12.2 5.36 Ig kappa chain V-I region Ni 14.29 3 1 11.46 14.29 1 1 5.03 14.29 1 1 4.82 14.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLIYDASNLETGVPSR 2 0 CID 103.07 5.03 1.00 1 2 874.46075 1747.91423 -4.77 37.26 4494 4494 MS2 23/30 Linfeng_091611_rIgG_8.raw High LLIYDASNLETGVPSR IPI:IPI00387106.1 2 1 CID 95.74 4.98 1.00 1 2 874.46436 1747.92143 -0.64 37.28 8468 8468 MS2 18/30 Linfeng_081211_IgG_10.raw High LLIYDASNLETGVPSR 2 0 CID 110.42 4.82 1.00 1 2 874.45850 1747.90972 -7.35 37.68 4235 4235 MS2 24/30 Linfeng_091811_SIN3A_8.raw IPI:IPI00395769.2 297 32.9 9.31 "Isoform Heart of ATP synthase subunit gamma, mitochondrial" 4.04 1 1 16.23 4.04 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IYGLGSLALYEK IPI:IPI00395769.2 2 1 CID 71.44 4.44 1.00 1 2 663.86945 1326.73161 0.90 40.13 9518 9518 MS2 19/22 Linfeng_081211_IgG_7.raw IPI:IPI00410017.1 547 61.1 9.07 Isoform 2 of Polyadenylate-binding protein 1 5.67 3 2 39.71 2.74 1 1 44.36 2.93 1 1 61.55 2.93 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SKVDEAVAVLQAHQAK IPI:IPI00410017.1 5 1 CID 60.25 5.83 1.00 1 3 565.31067 1693.91745 -3.42 29.47 3335 3335 MS2 32/60 Linfeng_091811_SIN3A_4.raw High SKVDEAVAVLQAHQAK 5 0 CID 91.55 4.57 1.00 1 3 565.31067 1693.91745 -3.42 29.05 3332 3332 MS2 31/60 Linfeng_091611_rIgG_4.raw High GFGFVcFSSPEEATK IPI:IPI00794246.1 11 1 CID C6(Carbamidomethyl) 88.00 3.88 1.00 1 2 831.87592 1662.74455 -1.42 39.50 9110 9110 MS2 15/28 Linfeng_081211_IgG_4.raw IPI:IPI00410360.3 311 35.2 9.33 Isoform 2 of Neuroguidin 4.50 3 1 11.38 4.50 1 1 9.42 4.50 1 1 17.83 4.50 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TAVTGSLSENDPLR 3 0 CID 65.74 4.45 1.00 1 2 730.37268 1459.73808 -0.48 29.87 6078 6078 MS2 19/26 Linfeng_081211_IgG_6.raw High TAVTGSLSENDPLR IPI:IPI00410360.3 3 1 CID 65.68 4.33 1.00 1 2 730.37091 1459.73454 -2.90 29.59 3334 3334 MS2 21/26 Linfeng_091811_SIN3A_6.raw High TAVTGSLSENDPLR 3 0 CID 60.30 4.27 1.00 1 2 730.37134 1459.73540 -2.32 29.46 3327 3327 MS2 21/26 Linfeng_091611_rIgG_6.raw IPI:IPI00412415.2 1556 178.6 6.60 Isoform 1 of Bromodomain adjacent to zinc finger domain protein 1A 0.90 1 1 56.45 0.90 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLTEALDEDADPTK IPI:IPI00412415.2 1 1 CID 58.07 4.38 1.00 1 2 766.85187 1532.69646 0.09 34.79 7133 7133 MS2 16/26 Linfeng_081211_IgG_2.raw IPI:IPI00456940.5 246 28.6 10.51 60S ribosomal protein L7-like 1 11.38 2 2 27.45 4.07 1 1 6.42 7.32 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FGVIcLEDLIHEIAFPGK IPI:IPI00456940.5 1 1 CID C5(Carbamidomethyl) 88.96 4.40 1.00 1 3 686.69727 2058.07724 2.08 54.76 6221 6221 MS2 29/68 Linfeng_091811_SIN3A_7.raw High IDGVSLLVQR IPI:IPI00456940.5 1 1 CID 46.70 3.67 1.00 1 2 550.32635 1099.64543 -1.46 35.79 8103 8103 MS2 17/18 Linfeng_081211_IgG_7.raw IPI:IPI00465439.5 364 39.4 8.09 Fructose-bisphosphate aldolase A 3.85 1 1 10.45 3.85 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GILAADESTGSIAK IPI:IPI00465439.5 2 1 CID 34.76 3.58 1.00 1 2 666.85388 1332.70049 -0.09 28.71 5684 5684 MS2 13/26 Linfeng_081211_IgG_6.raw IPI:IPI00479823.3 1400 159.2 5.01 Putative uncharacterized protein RSF1 2.14 3 2 56.16 0.93 1 1 28.11 1.21 1 1 20.86 1.21 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YGPLLDLPELPFPELER 3 0 CID 48.96 4.96 1.00 1 2 999.53156 1998.05583 -1.26 51.92 6174 6174 MS2 16/32 Linfeng_091811_SIN3A_1.raw High LEEQLQDLDVALK IPI:IPI00479823.3 3 1 CID 49.69 4.71 1.00 1 2 757.41016 1513.81304 1.42 38.77 8270 8270 MS2 19/24 Linfeng_081211_IgG_2.raw High YGPLLDLPELPFPELER IPI:IPI00479823.3 3 1 CID 50.38 4.48 1.00 1 2 999.53320 1998.05913 0.39 51.75 6056 6056 MS2 15/32 Linfeng_091611_rIgG_1.raw IPI:IPI00513689.1 141 16.8 8.69 17 kDa protein 7.09 1 1 9.42 7.09 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DGVLEEQIER IPI:IPI00513689.1 2 1 CID 32.57 3.47 1.00 1 2 594.29761 1187.58794 -2.01 31.06 6655 6655 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00549540.3 392 43.9 8.91 p21-activated protein kinase-interacting protein 1 2.81 1 1 17.67 2.81 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GEQYVVIIQNK IPI:IPI00549540.3 1 1 CID 37.76 3.80 1.00 1 2 645.85577 1290.70427 -0.77 30.89 6421 6421 MS2 15/20 Linfeng_081211_IgG_6.raw IPI:IPI00549919.1 659 76.8 7.18 Isoform 2 of Cullin-4A 1.82 2 1 26.34 1.82 1 1 22.66 1.82 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ETVEEQVSTTER 3 0 CID 62.33 4.30 1.00 1 2 704.33130 1407.65532 -3.22 23.69 2503 2503 MS2 17/22 Linfeng_091811_SIN3A_3.raw High ETVEEQVSTTER IPI:IPI00549919.1 3 1 CID 72.86 3.50 1.00 1 2 704.33282 1407.65837 -1.05 25.01 4649 4649 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00552978.1 1231 141.2 5.43 Cohesin subunit SA-2 4.31 4 3 51.39 0.97 1 1 48.15 3.33 2 2 23.37 1.22 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ITELFAVALPQLLAK IPI:IPI00552978.1 2 1 CID 70.62 4.95 1.00 1 2 813.99347 1626.97966 -2.05 49.69 5769 5769 MS2 16/28 Linfeng_091611_rIgG_2.raw High EPNPQGESHPPLNLAFLDILSEFSSK IPI:IPI00552978.1 2 1 CID 96.84 4.83 1.00 1 3 956.14624 2866.42417 -0.60 53.02 6166 6166 MS2 21/100 Linfeng_091611_rIgG_2.raw High ITELFAVALPQLLAK 2 0 CID 72.02 4.43 1.00 1 2 813.98859 1626.96990 -8.05 49.99 5915 5915 MS2 15/28 Linfeng_091811_SIN3A_2.raw High HTDTDVLEAcSK IPI:IPI00552978.1 2 1 CID C10(Carbamidomethyl) 86.39 3.52 1.00 1 2 688.31268 1375.61809 1.61 23.95 3971 3971 MS2 12/22 Linfeng_081211_IgG_2.raw IPI:IPI00639842.1 582 68.0 5.05 cDNA FLJ56362 2.41 1 1 15.10 2.41 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LQETSSQSYVEEQK IPI:IPI00639842.1 3 1 CID 69.06 5.23 1.00 1 2 828.39105 1655.77483 -0.67 23.66 4201 4201 MS2 21/26 Linfeng_081211_IgG_3.raw IPI:IPI00640037.1 126 13.6 7.21 Ribosomal protein L5 7.94 1 1 10.87 7.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIIcQIAYAR IPI:IPI00640037.1 2 1 CID C4(Carbamidomethyl) 43.55 3.73 1.00 1 2 611.81512 1222.62297 -1.59 36.06 8189 8189 MS2 15/18 Linfeng_081211_IgG_7.raw IPI:IPI00640929.1 91 10.4 5.48 Ribosomal protein S6 13.19 1 1 5.95 13.19 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LNISFPATGcQK IPI:IPI00640929.1 2 1 CID C10(Carbamidomethyl) 28.05 3.89 1.00 1 2 668.33893 1335.67058 -1.52 33.52 7296 7296 MS2 13/22 Linfeng_081211_IgG_7.raw IPI:IPI00641845.1 249 27.9 9.54 "Chromosome 1 open reading frame 131, isoform CRA_a" 4.42 2 1 22.04 4.42 1 1 8.87 4.42 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DVDTQEFNLEK 5 0 CID 43.33 4.07 1.00 1 2 669.31219 1337.61711 -3.66 31.53 3594 3594 MS2 17/20 Linfeng_091811_SIN3A_6.raw High DVDTQEFNLEK IPI:IPI00641845.1 5 1 CID 61.14 3.95 1.00 1 2 669.31390 1337.62053 -1.11 31.70 6670 6670 MS2 17/20 Linfeng_081211_IgG_6.raw IPI:IPI00642549.2 403 42.3 5.43 "cDNA FLJ56531, highly similar to UV excision repair protein RAD23 homolog B" 4.71 1 1 8.74 4.71 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QIIQQNPSLLPALLQQIGR IPI:IPI00642549.2 2 1 CID 50.69 4.50 1.00 1 3 710.75220 2130.24204 1.22 47.59 11200 11200 MS2 18/72 Linfeng_081211_IgG_5.raw IPI:IPI00643708.1 219 25.7 9.66 Protein 4.57 1 1 28.74 4.57 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SAYNVYVAER IPI:IPI00643708.1 2 1 CID 62.53 3.59 1.00 1 2 586.28967 1171.57207 -1.85 27.12 5316 5316 MS2 15/18 Linfeng_081211_IgG_8.raw IPI:IPI00644382.1 491 55.6 6.35 Ring finger and WD repeat domain 2 2.85 1 1 16.00 2.85 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TASQLDEFQEcLSK IPI:IPI00644382.1 6 1 CID C11(Carbamidomethyl) 59.80 3.53 1.00 1 2 828.38196 1655.75664 -0.94 34.88 8104 8104 MS2 14/26 Linfeng_081211_IgG_3.raw IPI:IPI00645010.1 248 29.6 9.48 Putative uncharacterized protein NONO 9.27 2 2 43.01 4.44 1 1 42.92 4.84 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RMEELHNQEVQK IPI:IPI00644848.1 5 1 CID 39.39 4.51 1.00 1 3 514.25427 1540.74826 -3.54 16.93 1687 1687 MS2 20/44 Linfeng_091811_SIN3A_5.raw High FAcHSASLTVR IPI:IPI00645966.1 4 1 CID C3(Carbamidomethyl) 35.43 4.25 1.00 1 3 416.87573 1248.61264 -2.22 23.25 3804 3804 MS2 23/40 Linfeng_081211_IgG_5.raw IPI:IPI00646175.1 539 60.8 6.71 Cell division cycle 40 homolog 2.23 1 1 41.91 2.23 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LWDTETGQcISR IPI:IPI00646175.1 2 1 CID C9(Carbamidomethyl) 69.65 3.96 1.00 1 2 733.33978 1465.67229 -1.21 29.59 5922 5922 MS2 19/22 Linfeng_081211_IgG_4.raw IPI:IPI00646239.1 345 37.8 4.97 "cDNA FLJ58398, highly similar to A-kinase anchor protein 8" 2.90 1 1 15.36 2.90 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YDSYEScDSR IPI:IPI00646239.1 6 1 CID C7(Carbamidomethyl) 72.10 3.46 1.00 1 2 641.23755 1281.46782 -0.80 20.35 3042 3042 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00647217.2 1042 117.7 6.52 Superkiller viralicidic activity 2-like 2 2.98 2 2 24.93 0.96 1 1 27.03 2.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SNVKPNSGELDPLYVVEVLLR IPI:IPI00647217.2 1 1 CID 56.85 5.24 1.00 1 3 781.09662 2341.27530 -0.42 53.30 5805 5805 MS2 29/80 Linfeng_091611_rIgG_3.raw High LTEQLAGPLR IPI:IPI00647217.2 1 1 CID 34.65 3.55 1.00 1 2 549.31854 1097.62981 -1.44 30.67 6526 6526 MS2 13/18 Linfeng_081211_IgG_3.raw IPI:IPI00647442.1 195 21.3 7.93 Voltage-dependent anion channel 2 6.67 1 1 3.95 6.67 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LTFDTTFSPNTGK IPI:IPI00647442.1 9 1 CID 48.08 3.95 1.00 1 2 714.85309 1428.69890 -1.18 34.53 7667 7667 MS2 13/24 Linfeng_081211_IgG_7.raw IPI:IPI00647942.1 52 5.9 5.95 Putative uncharacterized protein SNRPE 71.15 2 2 4.13 23.08 1 1 10.95 48.08 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IEGcIIGFDEYMNLVLDDAEEIHSK IPI:IPI00647942.1 3 1 CID C4(Carbamidomethyl) 121.79 7.34 1.00 1 3 970.79071 2910.35758 1.32 52.20 6000 6000 MS2 28/96 Linfeng_091811_SIN3A_10.raw High GDNITLLQSVSN IPI:IPI00647942.1 3 1 CID 74.78 4.13 1.00 1 2 630.82404 1260.64079 -1.81 37.14 8421 8421 MS2 16/22 Linfeng_081211_IgG_10.raw IPI:IPI00654617.1 90 10.1 10.01 h/ACA ribonucleoprotein complex subunit 2 isoform b 42.22 6 3 12.40 21.11 1 1 16.97 42.22 3 3 15.77 21.11 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IKADPDGPEAQAEAcSGER 4 0 CID C15(Carbamidomethyl) 86.49 7.31 1.00 1 3 667.63599 2000.89341 -2.26 22.21 2231 2231 MS2 33/72 Linfeng_091811_SIN3A_9.raw High IKADPDGPEAQAEAcSGER IPI:IPI00654617.1 4 1 CID C15(Carbamidomethyl) 101.47 7.17 1.00 1 3 667.63660 2000.89524 -1.34 21.97 2172 2172 MS2 29/72 Linfeng_091611_rIgG_9.raw High TYQELLVNQNPIAQPLASR IPI:IPI00654617.1 4 1 CID 114.95 5.61 1.00 1 3 719.05322 2155.14511 -2.58 37.87 4266 4266 MS2 30/72 Linfeng_091611_rIgG_9.raw High TYQELLVNQNPIAQPLASR 4 0 CID 26.26 5.54 1.00 1 3 719.05499 2155.15042 -0.11 37.79 8880 8880 MS2 25/72 Linfeng_081211_IgG_8.raw High ADPDGPEAQAEAcSGER 4 0 CID C13(Carbamidomethyl) 40.64 4.45 1.00 1 3 587.24353 1759.71604 -1.62 22.28 2240 2240 MS2 26/64 Linfeng_091811_SIN3A_9.raw High ADPDGPEAQAEAcSGER IPI:IPI00654617.1 4 1 CID C13(Carbamidomethyl) 112.29 4.19 1.00 1 2 880.36084 1759.71440 -2.55 22.02 2179 2179 MS2 21/32 Linfeng_091611_rIgG_9.raw IPI:IPI00719622.1 69 7.8 10.70 40S ribosomal protein S28 15.94 1 1 6.85 15.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TGSQGQcTQVR IPI:IPI00719622.1 1 1 CID C7(Carbamidomethyl) 47.72 3.51 1.00 1 2 611.28497 1221.56267 -1.18 14.19 1442 1442 MS2 13/20 Linfeng_081211_IgG_10.raw IPI:IPI00746554.2 423 48.0 10.56 48 kDa protein 4.02 1 1 24.07 4.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDASSASSFLDSDELER IPI:IPI00746554.2 4 1 CID 113.85 6.10 1.00 1 2 915.40417 1829.80107 -1.40 35.33 7812 7812 MS2 20/32 Linfeng_081211_IgG_4.raw IPI:IPI00783862.2 206 22.1 7.65 Flavin reductase 7.28 1 1 22.04 7.28 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVAGQDAVIVLLGTR IPI:IPI00783862.2 2 1 CID 83.55 5.43 1.00 1 2 756.94165 1512.87602 1.01 41.46 9892 9892 MS2 20/28 Linfeng_081211_IgG_10.raw IPI:IPI00786995.1 4096 465.2 7.23 "similar to protein kinase, DNA-activated, catalytic polypeptide" 2.44 9 7 116.81 0.44 1 1 85.52 1.56 6 5 88.88 0.85 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATQQQHDFTLTQTADGR IPI:IPI00786995.1 3 1 CID 41.09 5.27 1.00 1 3 639.97083 1917.89792 -3.70 24.80 2663 2663 MS2 26/64 Linfeng_091811_SIN3A_1.raw High ATQQQHDFTLTQTADGR IPI:IPI00786995.1 3 1 CID 47.85 4.91 1.00 1 3 639.97083 1917.89792 -3.70 24.74 2562 2562 MS2 28/64 Linfeng_091611_rIgG_1.raw High TVGALQVLGTEAQSSLLK IPI:IPI00786995.1 3 1 CID 55.74 4.86 1.00 1 2 908.01611 1815.02495 1.46 49.39 8877 8877 MS2 10/34 Linfeng_081211_IgG_1.raw High HSSLITPLQAVAQR IPI:IPI00786995.1 3 1 CID 41.78 4.73 1.00 1 3 507.62143 1520.84974 -3.07 32.22 3546 3546 MS2 27/52 Linfeng_091611_rIgG_1.raw High VTELALTASDR IPI:IPI00786995.1 3 1 CID 50.07 4.51 1.00 1 2 588.31439 1175.62151 -4.42 27.85 2973 2973 MS2 18/20 Linfeng_091611_rIgG_1.raw High NLDLAVLELMQSSVDNTK IPI:IPI00786995.1 3 1 CID 67.89 4.36 1.00 1 3 664.00940 1990.01364 -1.30 49.60 5893 5893 MS2 31/68 Linfeng_091811_SIN3A_1.raw High NLLIFENLIDLK IPI:IPI00786995.1 3 1 CID 56.49 4.21 1.00 1 2 722.92316 1444.83904 -1.40 51.04 5938 5938 MS2 18/22 Linfeng_091611_rIgG_2.raw High NLLIFENLIDLK IPI:IPI00786995.1 3 1 CID 63.52 4.19 1.00 1 2 722.92383 1444.84038 -0.47 50.88 5948 5948 MS2 18/22 Linfeng_091611_rIgG_1.raw High LAcDVDQVTR IPI:IPI00786995.1 3 1 CID C3(Carbamidomethyl) 72.67 4.13 1.00 1 2 588.78479 1176.56230 -4.68 23.05 2327 2327 MS2 17/18 Linfeng_091611_rIgG_1.raw IPI:IPI00787625.2 52 6.1 9.66 6 kDa protein 21.15 1 1 3.58 21.15 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VNTLIRPDGEK IPI:IPI00787625.2 6 1 CID 36.51 3.58 1.00 1 2 621.34442 1241.68157 -2.68 22.36 3886 3886 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00788741.1 98 10.3 5.97 "Hydroxysteroid (17-beta) dehydrogenase 12, isoform CRA_g" 10.20 1 1 3.50 10.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISYSLFTALR IPI:IPI00788741.1 3 1 CID 63.60 3.50 1.00 1 2 585.82898 1170.65068 -0.93 41.47 9976 9976 MS2 14/18 Linfeng_081211_IgG_7.raw IPI:IPI00788781.1 101 11.2 6.07 Putative uncharacterized protein FABP5 13.86 1 1 39.89 13.86 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVVEcVmNNVTcTR IPI:IPI00788781.1 2 1 CID "C5(Carbamidomethyl), M7(Oxidation), C12(Carbamidomethyl)" 98.79 5.03 1.00 1 2 855.90137 1710.79546 -1.05 28.54 5636 5636 MS2 20/26 Linfeng_081211_IgG_10.raw IPI:IPI00788836.1 542 57.6 8.95 "cDNA FLJ57320, highly similar to Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial" 2.77 1 1 31.47 2.77 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVETIANDVVSLATK IPI:IPI00788836.1 2 1 CID 70.42 5.14 1.00 1 2 758.91608 1516.82488 2.03 43.47 10175 10175 MS2 20/28 Linfeng_081211_IgG_4.raw IPI:IPI00790361.1 46 5.1 5.10 5 kDa protein 28.26 2 1 4.31 28.26 1 1 6.80 28.26 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IEGDETSTEAATR IPI:IPI00790361.1 6 1 CID 89.27 4.63 1.00 1 2 690.31671 1379.62615 -1.75 18.23 1676 1676 MS2 21/24 Linfeng_091811_SIN3A_9.raw High IEGDETSTEAATR 6 0 CID 71.11 4.31 1.00 1 2 690.31500 1379.62273 -4.23 19.05 2548 2548 MS2 19/24 Linfeng_081211_IgG_9.raw IPI:IPI00790511.1 175 18.8 10.05 19 kDa protein 19.43 4 2 13.59 12.00 1 1 10.20 12.00 1 1 13.01 19.43 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGASAAPAASAAAALAPSATR 2 0 CID 75.77 5.97 1.00 1 2 885.45880 1769.91033 -2.17 30.24 3432 3432 MS2 21/40 Linfeng_091611_rIgG_6.raw High SGASAAPAASAAAALAPSATR IPI:IPI00790511.1 2 1 CID 67.08 5.47 1.00 1 2 885.45844 1769.90959 -2.58 30.51 3458 3458 MS2 20/40 Linfeng_091811_SIN3A_6.raw High SGASAAPAASAAAALAPSATR 2 0 CID 32.39 5.20 1.00 1 2 885.45953 1769.91179 -1.34 30.43 6252 6252 MS2 19/40 Linfeng_081211_IgG_6.raw High LLLDTFEYQGLVK IPI:IPI00790511.1 3 1 CID 74.52 4.91 1.00 1 2 769.92499 1538.84270 -2.49 43.23 5099 5099 MS2 21/24 Linfeng_091811_SIN3A_6.raw IPI:IPI00790580.1 147 16.1 9.04 16 kDa protein 11.56 1 1 8.53 11.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AIVAIENPADVSVISSR IPI:IPI00790580.1 10 1 CID 77.20 4.97 1.00 1 2 870.97729 1740.94731 -1.04 36.58 8228 8228 MS2 17/32 Linfeng_081211_IgG_10.raw IPI:IPI00790699.3 998 115.2 8.40 Isoform 3 of U2-associated protein SR140 4.71 3 3 38.98 1.20 1 1 39.91 3.51 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AAAEIYEEFLAAFEGSDGNK IPI:IPI00790699.3 7 1 CID 104.80 5.10 1.00 1 3 711.33197 2131.98136 -0.28 51.94 5642 5642 MS2 23/76 Linfeng_091611_rIgG_3.raw High LQNIFLGLVNIIEEK IPI:IPI00790699.3 6 1 CID 53.40 4.64 1.00 1 3 581.67303 1743.00455 -0.36 54.75 5962 5962 MS2 26/56 Linfeng_091611_rIgG_3.raw High LYSILQGDSPTK IPI:IPI00788772.1 5 1 CID 28.69 3.56 1.00 1 2 661.35394 1321.70061 0.57 34.35 7013 7013 MS2 15/22 Linfeng_081211_IgG_2.raw IPI:IPI00791315.1 189 21.1 9.00 21 kDa protein 6.35 1 1 11.63 6.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IQTQPGYANTLR IPI:IPI00791315.1 6 1 CID 66.44 3.65 1.00 1 2 681.36157 1361.71587 -1.00 25.85 4764 4764 MS2 17/22 Linfeng_081211_IgG_7.raw IPI:IPI00791426.2 121 14.4 11.31 Putative uncharacterized protein RPL24 10.74 2 1 18.50 10.74 1 1 10.86 10.74 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AITGASLADImAK 4 0 CID M11(Oxidation) 76.18 5.04 1.00 1 2 639.33942 1277.67156 -4.30 31.65 3452 3452 MS2 16/24 Linfeng_091811_SIN3A_8.raw High AITGASLADImAK IPI:IPI00791426.2 4 1 CID M11(Oxidation) 79.05 4.38 1.00 1 2 639.34119 1277.67510 -1.53 31.35 6746 6746 MS2 17/24 Linfeng_081211_IgG_8.raw IPI:IPI00793589.2 581 65.8 6.15 "cDNA FLJ51740, highly similar to Dolichyl-diphosphooligosaccharide--proteinglycosyltransferase 67 kDa subunit" 2.07 1 1 18.51 2.07 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NIEIDSPYEISR IPI:IPI00793589.2 2 1 CID 33.71 3.76 1.00 1 2 718.35706 1435.70683 0.30 33.74 7300 7300 MS2 13/22 Linfeng_081211_IgG_4.raw IPI:IPI00794267.1 167 18.1 10.05 18 kDa protein 7.19 1 1 70.87 7.19 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AQIFANTVDNAR IPI:IPI00794267.1 2 1 CID 76.35 3.71 1.00 1 2 660.33789 1319.66850 -1.36 28.68 5464 5464 MS2 18/22 Linfeng_081211_IgG_5.raw IPI:IPI00794643.1 87 9.2 4.64 RAE1 RNA export 1 homolog 14.94 1 1 4.02 14.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cWEVQDSGQTIPK IPI:IPI00794643.1 3 1 CID C1(Carbamidomethyl) 41.79 4.02 1.00 1 2 774.36078 1547.71428 -1.07 29.92 6094 6094 MS2 14/24 Linfeng_081211_IgG_6.raw IPI:IPI00795853.1 147 16.0 11.90 16 kDa protein 7.48 1 1 20.42 7.48 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AVVGVVAGGGR IPI:IPI00795853.1 5 1 CID 64.18 3.47 1.00 1 2 471.27957 941.55187 -0.95 23.85 4101 4101 MS2 18/20 Linfeng_081211_IgG_7.raw IPI:IPI00796459.1 193 20.4 8.24 20 kDa protein 6.74 1 1 11.64 6.74 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QAASGLVGQENAR IPI:IPI00796459.1 3 1 CID 93.40 4.12 1.00 1 2 650.83417 1300.66106 0.45 21.87 3394 3394 MS2 16/24 Linfeng_081211_IgG_5.raw IPI:IPI00796554.1 159 18.1 10.35 18 kDa protein 7.55 1 1 14.63 7.55 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AIIIFVPVPQLK IPI:IPI00796554.1 5 1 CID 42.15 3.72 1.00 1 2 669.43292 1337.85857 2.23 47.23 11423 11423 MS2 13/22 Linfeng_081211_IgG_8.raw IPI:IPI00796689.1 962 107.3 8.02 107 kDa protein 0.94 1 1 20.69 0.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VEDFTQNPR IPI:IPI00796689.1 2 1 CID 20.51 3.68 1.00 1 2 553.26740 1105.52751 0.18 23.85 3937 3937 MS2 12/16 Linfeng_081211_IgG_2.raw IPI:IPI00797788.1 102 11.8 5.52 12 kDa protein 20.59 2 2 25.50 9.80 1 1 26.73 10.78 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IGSLIDVNQSK IPI:IPI00797788.1 6 1 CID 69.25 4.31 1.00 1 2 587.32355 1173.63982 -6.49 29.31 3197 3197 MS2 18/20 Linfeng_091811_SIN3A_9.raw High VFYYLVQDLK IPI:IPI00797788.1 5 1 CID 53.28 4.22 1.00 1 2 644.35437 1287.70146 2.39 39.93 9388 9388 MS2 16/18 Linfeng_081211_IgG_10.raw IPI:IPI00798039.1 36 4.2 6.44 4 kDa protein 36.11 1 1 4.43 36.11 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MFLQYYLNEQGDR IPI:IPI00798039.1 2 1 CID 65.54 4.43 1.00 1 2 838.89111 1676.77495 0.70 40.13 9459 9459 MS2 16/24 Linfeng_081211_IgG_10.raw IPI:IPI00816063.1 132 14.2 8.65 Isoform 2 of 60S ribosomal protein L12 37.88 5 3 9.98 12.12 1 1 13.02 12.12 1 1 19.02 37.88 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EILGTAQSVGcNVDGR 2 0 CID C11(Carbamidomethyl) 95.22 4.84 1.00 1 2 838.40527 1675.80327 -2.16 28.84 3102 3102 MS2 21/30 Linfeng_091611_rIgG_9.raw High EILGTAQSVGcNVDGR 2 0 CID C11(Carbamidomethyl) 85.88 4.56 1.00 1 2 838.40533 1675.80339 -2.09 29.13 5950 5950 MS2 19/30 Linfeng_081211_IgG_8.raw High HPHDIIDDINSGAVEcPAS IPI:IPI00816063.1 2 1 CID C16(Carbamidomethyl) 24.53 4.54 1.00 1 3 682.97479 2046.90982 -4.30 33.59 3766 3766 MS2 25/72 Linfeng_091811_SIN3A_9.raw High EILGTAQSVGcNVDGR IPI:IPI00816063.1 2 1 CID C11(Carbamidomethyl) 116.46 4.46 1.00 1 2 838.40454 1675.80181 -3.04 29.14 3173 3173 MS2 18/30 Linfeng_091811_SIN3A_9.raw High cTGGEVGATSALAPK IPI:IPI00816063.1 2 1 CID C1(Carbamidomethyl) 33.30 4.33 1.00 1 2 709.84924 1418.69121 -2.31 24.89 2606 2606 MS2 15/28 Linfeng_091811_SIN3A_9.raw IPI:IPI00830039.1 471 53.1 9.09 Isoform 2 of Splicing factor U2AF 65 kDa subunit 3.40 1 1 19.19 3.40 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LFIGGLPNYLNDDQVK IPI:IPI00830039.1 2 1 CID 79.83 4.53 1.00 1 2 903.47443 1805.94158 -0.96 42.08 9775 9775 MS2 21/30 Linfeng_081211_IgG_5.raw IPI:IPI00830089.1 248 27.4 8.48 Thymopoietin zeta isoform 6.45 1 1 12.67 6.45 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SELVANNVTLPAGEQR IPI:IPI00830089.1 6 1 CID 57.10 4.95 1.00 1 2 849.44263 1697.87798 -2.23 30.61 6170 6170 MS2 18/30 Linfeng_081211_IgG_5.raw IPI:IPI00847149.1 94 10.6 9.52 Similar to 40S ribosomal protein S26 15.96 4 1 5.81 15.96 1 1 5.99 15.96 1 1 8.41 15.96 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DISEASVFDAYVLPK 5 0 CID 52.33 4.31 1.00 1 2 827.42139 1653.83550 -0.97 44.08 4824 4824 MS2 19/28 Linfeng_091611_rIgG_10.raw High DISEASVFDAYVLPK IPI:IPI00847149.1 5 1 CID 27.60 4.30 1.00 1 3 551.94904 1653.83255 -2.75 44.35 5045 5045 MS2 25/56 Linfeng_091811_SIN3A_10.raw High DISEASVFDAYVLPK IPI:IPI00847149.1 5 1 CID 63.32 4.11 1.00 1 2 827.42120 1653.83513 -1.19 44.32 5041 5041 MS2 19/28 Linfeng_091811_SIN3A_10.raw High DISEASVFDAYVLPK 5 0 CID 34.49 3.89 1.00 1 2 827.42419 1653.84111 2.43 43.58 10558 10558 MS2 14/28 Linfeng_081211_IgG_10.raw IPI:IPI00867679.1 227 25.2 7.56 Similar to Prosomal P27K protein 5.73 1 1 3.51 5.73 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AINQGGLTSVAVR IPI:IPI00867679.1 3 1 CID 45.57 3.51 1.00 1 2 643.36426 1285.72124 -0.86 28.23 5659 5659 MS2 13/24 Linfeng_081211_IgG_8.raw IPI:IPI00869138.1 244 27.5 5.38 SDA1 domain containing protein 8.20 1 1 11.74 8.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LNTMPMEEQKAKTAAVSTSR IPI:IPI00869138.1 1 1 CID 1.00 4.01 1.00 1 2 1097.04834 2193.08940 -4.98 40.41 9685 9685 MS2 6/38 Linfeng_081211_IgG_8.raw IPI:IPI00871437.1 394 45.4 8.76 Isoform 2 of CTD small phosphatase-like protein 2 3.05 1 1 19.67 3.05 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIDNNLITSTPR IPI:IPI00871437.1 2 1 CID 20.61 3.61 1.00 1 2 679.84784 1358.68840 -1.98 31.82 6558 6558 MS2 14/22 Linfeng_081211_IgG_5.raw IPI:IPI00877802.2 390 43.5 4.96 histone-binding protein RBBP4 isoform c 61.28 32 9 23.80 4.10 1 1 374.85 61.28 31 9 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LHSFESHKDEIFQVQWSPHNETILASSGTDR IPI:IPI00877802.2 4 1 CID 300.00 9.83 1.00 1 3 1199.24048 3595.70688 -3.70 34.20 4073 4073 MS2 36/120 Linfeng_091811_SIN3A_5.raw High TIFTGHTAVVEDVSWHLLHESLFGSVADDQK IPI:IPI00877802.2 4 1 CID 300.00 9.31 1.00 1 3 1146.90356 3438.69614 -0.13 46.73 5719 5719 MS2 39/120 Linfeng_091811_SIN3A_5.raw High LVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEK IPI:IPI00877802.2 5 1 CID 300.00 8.91 1.00 1 4 1024.23389 4093.91372 -5.81 36.23 4202 4202 MS2 44/216 Linfeng_091811_SIN3A_6.raw High LVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEK IPI:IPI00877802.2 5 1 CID 148.08 8.58 1.00 1 4 1024.23596 4093.92202 -3.79 36.36 3997 3997 MS2 42/216 Linfeng_091811_SIN3A_7.raw High LVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEK IPI:IPI00877802.2 5 1 CID 300.00 8.05 1.00 1 4 1024.23254 4093.90835 -7.13 36.05 4322 4322 MS2 46/216 Linfeng_091811_SIN3A_5.raw High LHSFESHKDEIFQVQWSPHNETILASSGTDR IPI:IPI00877802.2 4 1 CID 117.66 7.62 1.00 1 4 899.68298 3595.71010 -2.80 34.14 4065 4065 MS2 35/180 Linfeng_091811_SIN3A_5.raw High IGEEQSPEDAEDGPPELLFIHGGHTAK IPI:IPI00877802.2 4 1 CID 146.32 7.02 1.00 1 3 958.45319 2873.34500 -4.85 35.10 4191 4191 MS2 32/104 Linfeng_091811_SIN3A_5.raw High EGYGLSWNPNLSGHLLSASDDHTIcLWDISAVPK IPI:IPI00877802.2 4 1 CID C25(Carbamidomethyl) 124.58 6.58 1.00 1 3 1251.60547 3752.80185 0.10 45.91 5617 5617 MS2 32/132 Linfeng_091811_SIN3A_5.raw High LHSFESHKDEIFQVQWSPHNETILASSGTDR IPI:IPI00877802.2 4 1 CID 85.07 6.19 1.00 1 4 899.68317 3595.71084 -2.60 34.43 3748 3748 MS2 38/180 Linfeng_091811_SIN3A_7.raw High TIFTGHTAVVEDVSWHLLHESLFGSVADDQK IPI:IPI00877802.2 4 1 CID 97.49 5.98 1.00 1 4 860.43048 3438.70009 1.02 46.72 5717 5717 MS2 42/180 Linfeng_091811_SIN3A_5.raw High TIFTGHTAVVEDVSWHLLHESLFGSVADDQK IPI:IPI00877802.2 4 1 CID 76.37 5.46 1.00 1 4 860.42896 3438.69399 -0.76 46.86 5551 5551 MS2 35/180 Linfeng_091811_SIN3A_6.raw High IGEEQSPEDAEDGPPELLFIHGGHTAK IPI:IPI00877802.2 4 1 CID 58.62 5.37 1.00 1 4 719.09308 2873.35048 -2.95 35.29 4079 4079 MS2 34/156 Linfeng_091811_SIN3A_6.raw High SNNTSKPSHSVDAHTAEVNcLSFNPYSEFILATGSADK IPI:IPI00877802.2 4 1 CID C20(Carbamidomethyl) 94.74 5.29 1.00 1 4 1024.72839 4095.89174 -1.78 39.75 4816 4816 MS2 40/222 Linfeng_091811_SIN3A_5.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 93.87 5.28 1.00 1 2 736.36725 1471.72722 -2.94 36.84 4059 4059 MS2 21/24 Linfeng_091811_SIN3A_7.raw High EGYGLSWNPNLSGHLLSASDDHTIcLWDISAVPK IPI:IPI00877802.2 4 1 CID C25(Carbamidomethyl) 90.96 5.24 1.00 1 4 938.95361 3752.79262 -2.36 45.77 5600 5600 MS2 35/198 Linfeng_091811_SIN3A_5.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 104.29 5.20 1.00 1 2 736.36719 1471.72710 -3.03 36.93 4137 4137 MS2 19/24 Linfeng_091811_SIN3A_8.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 102.16 5.15 1.00 1 2 736.36743 1471.72759 -2.69 36.79 4273 4273 MS2 20/24 Linfeng_091811_SIN3A_6.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 95.06 5.14 1.00 1 2 736.36755 1471.72783 -2.53 36.93 4197 4197 MS2 20/24 Linfeng_091811_SIN3A_9.raw High TIFTGHTAVVEDVSWHLLHESLFGSVADDQK IPI:IPI00877802.2 4 1 CID 95.13 5.11 1.00 1 4 860.42822 3438.69106 -1.61 46.91 5341 5341 MS2 36/180 Linfeng_091811_SIN3A_7.raw High TPSSDVLVFDYTK IPI:IPI00395865.4;IPI:IPI00877802.2 10 2 CID 91.30 5.08 1.00 1 2 736.36652 1471.72576 -3.94 36.58 4392 4392 MS2 19/24 Linfeng_091811_SIN3A_5.raw High EGYGLSWNPNLSGHLLSASDDHTIcLWDISAVPK IPI:IPI00877802.2 4 1 CID C25(Carbamidomethyl) 130.73 5.07 1.00 1 4 938.95435 3752.79555 -1.58 45.96 5221 5221 MS2 35/198 Linfeng_091811_SIN3A_7.raw High IGEEQSPEDAEDGPPELLFIHGGHTAK IPI:IPI00877802.2 4 1 CID 40.51 4.94 1.00 1 4 719.09137 2873.34365 -5.33 35.00 4178 4178 MS2 36/156 Linfeng_091811_SIN3A_5.raw High HPSKPDPSGEcNPDLR IPI:IPI00877802.2 5 1 CID C11(Carbamidomethyl) 65.96 4.71 1.00 1 3 602.60950 1805.81394 -5.35 18.25 1874 1874 MS2 30/60 Linfeng_091811_SIN3A_5.raw High HPSKPDPSGEcNPDLR 5 0 CID C11(Carbamidomethyl) 75.76 4.67 1.00 1 3 602.61230 1805.82236 -0.69 19.23 2610 2610 MS2 26/60 Linfeng_081211_IgG_5.raw High IGEEQSPEDAEDGPPELLFIHGGHTAK IPI:IPI00877802.2 4 1 CID 36.91 4.56 1.00 1 4 719.09332 2873.35146 -2.61 35.40 3997 3997 MS2 34/156 Linfeng_091811_SIN3A_9.raw High IGEEQSPEDAEDGPPELLFIHGGHTAK IPI:IPI00877802.2 4 1 CID 52.85 4.48 1.00 1 4 719.09320 2873.35097 -2.78 35.27 3886 3886 MS2 34/156 Linfeng_091811_SIN3A_10.raw High GEFGGFGSVSGK IPI:IPI00877802.2 5 1 CID 70.28 4.37 1.00 1 2 564.76697 1128.52666 -4.80 30.29 3547 3547 MS2 19/22 Linfeng_091811_SIN3A_5.raw High SNNTSKPSHSVDAHTAEVNcLSFNPYSEFILATGSADK IPI:IPI00877802.2 4 1 CID C20(Carbamidomethyl) 76.18 4.31 1.00 1 5 819.98370 4095.88941 -2.35 39.96 4463 4463 MS2 46/296 Linfeng_091811_SIN3A_7.raw High GEFGGFGSVSGK IPI:IPI00877802.2 5 1 CID 73.10 4.27 1.00 1 2 564.76758 1128.52788 -3.72 30.41 3222 3222 MS2 19/22 Linfeng_091811_SIN3A_7.raw High GEFGGFGSVSGK IPI:IPI00877802.2 5 1 CID 57.28 4.23 1.00 1 2 564.76715 1128.52703 -4.48 30.52 3263 3263 MS2 19/22 Linfeng_091811_SIN3A_10.raw High GEFGGFGSVSGK IPI:IPI00877802.2 5 1 CID 71.58 4.21 1.00 1 2 564.76770 1128.52812 -3.51 30.44 3351 3351 MS2 19/22 Linfeng_091811_SIN3A_9.raw High GEFGGFGSVSGK IPI:IPI00877802.2 5 1 CID 76.36 4.14 1.00 1 2 564.76746 1128.52764 -3.94 30.50 3300 3300 MS2 19/22 Linfeng_091811_SIN3A_8.raw IPI:IPI00877939.1 1275 145.0 6.99 "cDNA FLJ16281 fis, clone NT2RI3003104, highly similar to Homo sapiens Jumonji, AT rich interactive domain 1B (RBP2-like) (JARID1B), mRNA" 0.86 1 1 17.01 0.86 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AQQLLSSGNLK IPI:IPI00877939.1 3 1 CID 30.35 3.55 1.00 1 2 579.82581 1158.64433 -2.96 28.52 5313 5313 MS2 14/20 Linfeng_081211_IgG_2.raw IPI:IPI00878133.1 230 26.3 11.00 26 kDa protein 4.35 1 1 16.85 4.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KLDELYGTWR IPI:IPI00878133.1 4 1 CID 42.08 3.72 1.00 1 2 640.83374 1280.66020 -2.50 32.35 6748 6748 MS2 15/18 Linfeng_081211_IgG_5.raw IPI:IPI00878431.1 128 14.8 7.99 15 kDa protein 10.94 3 1 4.60 10.94 1 1 7.30 10.94 1 1 6.31 10.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLEQLTGQTPVFSK 5 0 CID 75.41 4.60 1.00 1 2 773.92603 1546.84477 -1.83 34.53 7872 7872 MS2 17/26 Linfeng_081211_IgG_8.raw High VLEQLTGQTPVFSK 5 0 CID 60.13 4.59 1.00 1 2 773.92468 1546.84209 -3.56 34.74 3854 3854 MS2 19/26 Linfeng_091811_SIN3A_8.raw High VLEQLTGQTPVFSK IPI:IPI00878431.1 5 1 CID 33.75 4.34 1.00 1 2 773.92438 1546.84148 -3.96 34.43 4121 4121 MS2 16/26 Linfeng_091611_rIgG_8.raw IPI:IPI00878484.1 308 32.2 9.82 Protein 4.55 2 1 30.99 4.55 1 1 28.91 4.55 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GDATVSYEDPPTAK 8 0 CID 77.13 4.19 1.00 1 2 725.83673 1450.66619 -2.42 23.67 2500 2500 MS2 17/26 Linfeng_091811_SIN3A_3.raw High GDATVSYEDPPTAK IPI:IPI00878484.1 8 1 CID 46.86 3.66 1.00 1 2 725.83771 1450.66814 -1.07 25.01 4652 4652 MS2 15/26 Linfeng_081211_IgG_3.raw IPI:IPI00879006.1 280 32.3 9.58 Ribosomal RNA-processing protein 7 homolog A 4.64 1 1 22.08 4.64 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IPSPLGYAAIPIK IPI:IPI00879006.1 2 1 CID 33.96 3.73 1.00 1 2 670.40326 1339.79924 0.58 40.18 9459 9459 MS2 15/24 Linfeng_081211_IgG_6.raw IPI:IPI00879999.1 881 98.5 10.02 ATP-dependent RNA helicase DDX54 1.25 1 1 40.34 1.25 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VADNAQQQYVR IPI:IPI00879999.1 2 1 CID 59.64 3.48 1.00 1 2 646.32318 1291.63909 0.08 22.16 3400 3400 MS2 12/20 Linfeng_081211_IgG_2.raw IPI:IPI00880053.1 448 48.8 6.86 49 kDa protein 2.68 1 1 15.47 2.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGGTSDVEVNEK IPI:IPI00880053.1 3 1 CID 40.10 3.54 1.00 1 2 617.30054 1233.59380 -1.62 20.39 2951 2951 MS2 15/22 Linfeng_081211_IgG_5.raw IPI:IPI00892671.1 295 32.0 8.03 32 kDa protein 16.95 5 3 126.59 4.75 1 1 117.44 16.95 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TTPPVLDSDGSFFLYSK IPI:IPI00892671.1 13 1 CID 79.65 5.46 1.00 1 3 625.31061 1873.91727 -2.47 41.66 4705 4705 MS2 31/64 Linfeng_091811_SIN3A_10.raw High TPEVTcVVVDVSHEDPEVK IPI:IPI00892671.1 13 1 CID C6(Carbamidomethyl) 55.78 5.33 1.00 1 3 713.67822 2139.02011 -3.46 34.31 3733 3733 MS2 27/72 Linfeng_091811_SIN3A_7.raw High STSGGTAALGcLVK IPI:IPI00892671.1 19 1 CID C11(Carbamidomethyl) 67.28 4.64 1.00 1 2 661.34021 1321.67314 -3.75 30.52 3303 3303 MS2 18/26 Linfeng_091811_SIN3A_8.raw High STSGGTAALGcLVK IPI:IPI00892671.1 19 1 CID C11(Carbamidomethyl) 22.07 4.38 1.00 1 2 661.34070 1321.67412 -3.01 30.49 3232 3232 MS2 13/26 Linfeng_091811_SIN3A_7.raw High STSGGTAALGcLVK 19 0 CID C11(Carbamidomethyl) 9.86 3.71 1.00 1 2 661.34235 1321.67742 -0.51 31.74 6911 6911 MS2 12/26 Linfeng_081211_IgG_3.raw IPI:IPI00892751.1 186 21.0 6.70 Putative uncharacterized protein THOC5 6.45 1 1 3.66 6.45 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TPNPANQYQFDK IPI:IPI00892751.1 2 1 CID 72.23 3.66 1.00 1 2 711.83417 1422.66106 -2.67 27.83 5539 5539 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00892816.1 52 6.0 4.44 Tripartite motif-containing 27 26.92 1 1 4.06 26.92 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YSYLQQDLPDNPER IPI:IPI00892816.1 8 1 CID 50.99 4.06 1.00 1 2 869.40717 1737.80705 -0.49 32.32 6734 6734 MS2 15/26 Linfeng_081211_IgG_5.raw IPI:IPI00894460.1 82 9.2 4.54 "Replication protein A3, 14kDa, isoform CRA_a" 19.51 1 1 13.88 19.51 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EDSHPFDLGLYNEAVK IPI:IPI00894460.1 2 1 CID 8.90 4.22 1.00 1 3 611.95905 1833.86258 -1.56 36.38 8161 8161 MS2 21/60 Linfeng_081211_IgG_10.raw IPI:IPI00894475.1 844 92.1 8.44 Isoform 1 of Kinesin-like protein KIF18B 1.42 1 1 20.50 1.42 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VPGLTQAVQVAK IPI:IPI00894475.1 3 1 CID 77.13 4.15 1.00 1 2 605.86151 1210.71575 0.24 31.31 6745 6745 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00908449.1 448 52.4 5.27 "cDNA FLJ58737, highly similar to Splicing factor 3A subunit 3" 6.03 2 2 44.32 2.68 1 1 18.18 3.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YLEmLLEYLQDYTDR IPI:IPI00908449.1 2 1 CID M4(Oxidation) 96.24 5.43 1.00 1 3 660.98199 1980.93143 2.75 53.15 6525 6525 MS2 33/56 Linfeng_091811_SIN3A_5.raw High SLESLDTSLFAK IPI:IPI00908449.1 2 1 CID 49.88 3.57 1.00 1 2 655.84406 1310.68083 -2.33 38.85 8864 8864 MS2 18/22 Linfeng_081211_IgG_5.raw IPI:IPI00908723.1 311 33.3 8.25 "cDNA FLJ61039, highly similar to Stomatin-like protein 2" 15.11 4 3 25.79 4.82 1 1 9.67 4.82 1 1 28.90 10.29 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AEQINQAAGEASAVLAK IPI:IPI00908723.1 3 1 CID 100.69 6.27 1.00 1 2 835.93506 1670.86284 -4.81 32.26 3690 3690 MS2 22/32 Linfeng_091811_SIN3A_6.raw High DVQGTDASLDEELDR IPI:IPI00908723.1 2 1 CID 110.21 5.48 1.00 1 2 831.87317 1662.73906 -3.81 31.46 3584 3584 MS2 24/28 Linfeng_091811_SIN3A_6.raw High DVQGTDASLDEELDR 2 0 CID 106.64 4.52 1.00 1 2 831.87585 1662.74443 -0.58 31.49 6605 6605 MS2 21/28 Linfeng_081211_IgG_6.raw High ILEPGLNILIPVLDR IPI:IPI00908723.1 2 1 CID 91.81 4.20 1.00 1 2 838.01141 1675.01555 0.11 50.17 5983 5983 MS2 18/28 Linfeng_091611_rIgG_6.raw IPI:IPI00909008.1 1009 111.9 5.22 "cDNA FLJ51067, highly similar to DNA damage-binding protein 1" 3.27 2 2 48.65 1.39 1 1 15.37 1.88 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SVLLLAYKPmEGNFEEIAR IPI:IPI00909177.1 4 1 CID M10(Oxidation) 72.12 4.55 1.00 1 3 732.71552 2196.13199 -2.29 37.90 3877 3877 MS2 23/72 Linfeng_091611_rIgG_3.raw High QGQGQLVTcSGAFK IPI:IPI00922069.1 3 1 CID C9(Carbamidomethyl) 70.73 3.79 1.00 1 2 740.86255 1480.71782 -2.39 28.71 5807 5807 MS2 19/26 Linfeng_081211_IgG_3.raw IPI:IPI00910623.1 149 16.3 6.28 cDNA FLJ60030 10.74 1 1 10.07 10.74 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QmTGLQcSSALGALDK IPI:IPI00910623.1 2 1 CID "M2(Oxidation), C7(Carbamidomethyl)" 1.00 3.83 1.00 1 2 848.40411 1695.80095 -1.87 35.92 8323 8323 MS2 6/30 Linfeng_081211_IgG_8.raw IPI:IPI00910763.2 388 42.0 9.83 cDNA FLJ57278 2.84 1 1 10.56 2.84 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LNQDQLDAVSK IPI:IPI00910763.2 3 1 CID 17.91 3.57 1.00 1 2 615.82520 1230.64311 8.62 26.16 5044 5044 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00910847.1 331 39.0 4.89 "cDNA FLJ52876, moderately similar to Homo sapiens conserved nuclear protein NHN1 (NHN1), mRNA" 3.63 1 1 15.49 3.63 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASDLEDEESAAR IPI:IPI00910847.1 5 1 CID 59.25 3.81 1.00 1 2 646.78424 1292.56120 0.82 23.53 3829 3829 MS2 16/22 Linfeng_081211_IgG_2.raw IPI:IPI00911118.1 766 86.1 9.03 "cDNA FLJ54363, highly similar to ATP-dependent RNA helicase DDX24" 1.96 1 1 26.54 1.96 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DKLDILGAAETGSGK IPI:IPI00911118.1 3 1 CID 81.29 4.52 1.00 1 2 737.89093 1474.77458 -0.18 33.15 7443 7443 MS2 19/28 Linfeng_081211_IgG_3.raw IPI:IPI00914054.2 93 10.2 5.87 Putative uncharacterized protein FBXO11 17.20 1 1 3.57 17.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SQDLSAAPAEQYLQEK IPI:IPI00914054.2 7 1 CID 41.79 3.57 1.00 1 2 889.43530 1777.86333 1.67 33.19 7457 7457 MS2 11/30 Linfeng_081211_IgG_3.raw IPI:IPI00915874.1 136 15.2 9.82 15 kDa protein 11.76 2 1 12.15 11.76 1 1 6.05 11.76 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QAEQLSAAGEGGDAGR IPI:IPI00915874.1 2 1 CID 80.35 4.60 1.00 1 2 758.85266 1516.69805 -0.45 21.32 3323 3323 MS2 18/30 Linfeng_081211_IgG_7.raw High QAEQLSAAGEGGDAGR 2 0 CID 78.72 4.34 1.00 1 2 758.85046 1516.69365 -3.35 20.14 1814 1814 MS2 18/30 Linfeng_091811_SIN3A_7.raw IPI:IPI00917675.1 79 9.0 10.89 Putative uncharacterized protein RPL31 11.39 1 1 9.93 11.39 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SAINEVVTR IPI:IPI00917675.1 8 1 CID 28.33 3.65 1.00 1 2 494.77441 988.54155 -0.69 25.09 4650 4650 MS2 14/16 Linfeng_081211_IgG_10.raw IPI:IPI00924895.1 64 7.1 7.18 SNRPG protein 18.75 1 1 8.59 18.75 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GNSIImLEALER IPI:IPI00924895.1 4 1 CID M6(Oxidation) 56.75 3.84 1.00 1 2 681.35822 1361.70915 -0.19 36.74 8275 8275 MS2 17/22 Linfeng_081211_IgG_10.raw IPI:IPI00924935.1 679 75.9 6.81 "cDNA FLJ57106, highly similar to Transferrin receptor protein 1" 1.77 1 1 17.33 1.77 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DSAQNSVIIVDK IPI:IPI00924935.1 2 1 CID 51.60 3.85 1.00 1 2 644.83997 1288.67266 -1.34 29.04 5902 5902 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00924976.1 104 11.7 8.69 Putative uncharacterized protein RFC5 9.62 1 1 5.33 9.62 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GPILSFASTR IPI:IPI00924976.1 5 1 CID 38.64 3.48 1.00 1 2 524.79370 1048.58013 1.43 34.24 7569 7569 MS2 14/18 Linfeng_081211_IgG_6.raw IPI:IPI00924991.1 903 101.8 9.10 "xeroderma pigmentosum, complementation group C isoform 2" 1.33 1 1 24.17 1.33 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DVDTYYLSNLVK IPI:IPI00924991.1 2 1 CID 69.94 4.20 1.00 1 2 715.36499 1429.72270 1.21 41.50 10361 10361 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00925071.1 208 23.5 8.91 24 kDa protein 7.21 2 1 8.73 7.21 1 1 4.96 7.21 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASTEGVAIQGQQGTR 4 0 CID 59.59 4.96 1.00 1 2 751.88019 1502.75310 -1.82 20.72 1994 1994 MS2 19/28 Linfeng_091611_rIgG_2.raw High ASTEGVAIQGQQGTR IPI:IPI00925071.1 4 1 CID 14.77 3.61 1.00 1 2 751.88403 1502.76079 3.30 22.71 3563 3563 MS2 14/28 Linfeng_081211_IgG_2.raw IPI:IPI00925670.1 638 77.8 5.74 Isoform 4 of RNA-binding protein 25 1.88 1 1 59.81 1.88 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DREEDEEDAYER IPI:IPI00925670.1 2 1 CID 88.70 3.91 1.00 1 2 778.31061 1555.61394 -0.28 21.40 3406 3406 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00926815.1 68 7.6 10.01 "Ribosomal protein L37a, isoform CRA_c" 26.47 1 1 13.20 26.47 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVAGGAWTYNTTSAVTVK IPI:IPI00926815.1 2 1 CID 67.20 4.02 1.00 1 2 913.96466 1826.92204 -3.46 32.46 6879 6879 MS2 18/34 Linfeng_081211_IgG_10.raw IPI:IPI00927827.1 111 11.8 5.22 12 kDa protein 11.71 1 1 8.79 11.71 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VITDIAGVIPAEK IPI:IPI00927827.1 2 1 CID 42.82 4.29 1.00 1 2 663.38696 1325.76665 -0.70 35.98 8153 8153 MS2 15/24 Linfeng_081211_IgG_6.raw IPI:IPI00935818.1 404 44.6 6.47 adenosylhomocysteinase isoform 2 2.97 1 1 9.11 2.97 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VAVVAGYGDVGK IPI:IPI00935818.1 2 1 CID 42.54 3.84 1.00 1 2 567.81012 1134.61296 -2.16 27.64 5334 5334 MS2 14/22 Linfeng_081211_IgG_6.raw IPI:IPI00937181.2 887 99.8 5.33 100 kDa protein 1.35 1 1 52.63 1.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NSAEEEVLSSEK IPI:IPI00937181.2 4 1 CID 56.23 3.57 1.00 1 2 661.30847 1321.60967 -1.65 27.15 4962 4962 MS2 14/22 Linfeng_081211_IgG_2.raw IPI:IPI00940461.1 200 21.8 6.79 "cDNA FLJ57690, highly similar to WD repeat protein 74" 6.50 1 1 13.51 6.50 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IWDLQGSEEPVFR IPI:IPI00940461.1 3 1 CID 59.74 4.43 1.00 1 2 788.39172 1575.77617 -2.60 39.23 8973 8973 MS2 19/24 Linfeng_081211_IgG_5.raw IPI:IPI00940631.1 240 25.5 10.39 26 kDa protein 5.00 1 1 12.81 5.00 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDGENVFTGQSK IPI:IPI00940631.1 3 1 CID 44.62 4.16 1.00 1 2 641.79498 1282.58269 -6.51 24.72 4530 4530 MS2 13/22 Linfeng_081211_IgG_6.raw IPI:IPI00941110.1 717 80.3 6.73 SUN domain-containing protein 2 6.28 3 3 23.41 1.26 1 1 23.05 2.65 1 1 20.68 2.37 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RLEDQLAGLQQELAALALK IPI:IPI00941110.1 3 1 CID 82.29 6.71 1.00 1 3 694.06201 2080.17148 -2.26 49.76 5372 5372 MS2 33/72 Linfeng_091611_rIgG_3.raw High DDVESQFPAWISQFLAR IPI:IPI00941110.1 3 1 CID 93.56 5.92 1.00 1 3 670.33032 2008.97641 0.00 54.81 6451 6451 MS2 33/64 Linfeng_091811_SIN3A_3.raw High IQEELSALR IPI:IPI00941110.1 3 1 CID 35.02 3.50 1.00 1 2 529.79437 1058.58147 -2.49 30.32 6394 6394 MS2 15/16 Linfeng_081211_IgG_3.raw IPI:IPI00947091.1 183 21.0 9.25 Protein 4.92 1 1 12.98 4.92 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FYNLVLLPR IPI:IPI00947091.1 2 1 CID 52.14 3.56 1.00 1 2 567.83636 1134.66545 -1.39 41.34 9564 9564 MS2 13/16 Linfeng_081211_IgG_5.raw IPI:IPI00953161.1 410 44.8 4.97 "cDNA FLJ60295, highly similar to Retinoblastoma-binding protein 5" 2.68 1 1 18.10 2.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDSQDLVASFR IPI:IPI00953161.1 3 1 CID 31.93 3.64 1.00 1 2 619.80341 1238.59953 -1.35 33.28 7156 7156 MS2 15/20 Linfeng_081211_IgG_4.raw IPI:IPI00954192.1 1709 196.5 7.14 Isoform 2 of Chromodomain-helicase-DNA-binding protein 1 3.34 5 4 64.95 0.76 1 1 82.26 1.46 3 2 43.90 1.11 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NKEPGEIQYLIK IPI:IPI00954192.1 2 1 CID 27.79 4.97 1.00 1 3 477.93152 1431.78000 -2.97 30.21 3294 3294 MS2 26/44 Linfeng_091611_rIgG_2.raw High QESQQNSDQNSNLNPHVIR IPI:IPI00902738.1 3 1 CID 22.56 4.89 1.00 1 3 736.68231 2208.03238 -2.94 22.72 2371 2371 MS2 20/72 Linfeng_091811_SIN3A_1.raw High FNILLTTYEILLK IPI:IPI00954192.1 2 1 CID 98.41 4.73 1.00 1 2 790.97058 1580.93389 2.55 54.79 6425 6425 MS2 21/24 Linfeng_091611_rIgG_1.raw High FNILLTTYEILLK IPI:IPI00954192.1 2 1 CID 70.09 4.62 1.00 1 2 790.96985 1580.93242 1.62 54.82 6339 6339 MS2 20/24 Linfeng_091611_rIgG_2.raw High LLITGTPLQNSLK IPI:IPI00954192.1 4 1 CID 24.99 4.03 1.00 1 2 699.42157 1397.83586 -0.31 46.42 8111 8111 MS2 14/24 Linfeng_081211_IgG_1.raw IPI:IPI00963818.1 177 19.2 9.33 Putative uncharacterized protein GAR1 5.08 1 1 18.18 5.08 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VDEIFGQLR IPI:IPI00963818.1 3 1 CID 47.20 3.79 1.00 1 2 538.78949 1076.57170 -1.71 34.79 7965 7965 MS2 15/16 Linfeng_081211_IgG_8.raw IPI:IPI00965290.1 717 84.0 6.79 Isoform 3 of Cullin-4B 1.67 1 1 31.11 1.67 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ETVEEQASTTER IPI:IPI00965290.1 4 1 CID 67.01 3.89 1.00 1 2 690.31842 1379.62956 0.73 21.11 3303 3303 MS2 13/22 Linfeng_081211_IgG_3.raw IPI:IPI00965314.1 421 47.0 8.31 Putative uncharacterized protein ABCE1 2.85 1 1 14.52 2.85 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NVEDLSGGELQR IPI:IPI00965314.1 2 1 CID 64.49 4.06 1.00 1 2 658.82428 1316.64128 -2.18 27.85 5339 5339 MS2 16/22 Linfeng_081211_IgG_4.raw IPI:IPI00966460.1 465 51.9 5.43 "cDNA FLJ56171, highly similar to Homo sapiens t-complex 11(TCP11), mRNA" 4.95 1 1 24.51 4.95 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High mTRGGGGGGLTETVNEVSKLSNK IPI:IPI00966460.1 1 1 CID M1(Oxidation) 6.04 3.56 1.00 1 2 1154.57983 2308.15239 -1.68 41.76 9677 9677 MS2 8/44 Linfeng_081211_IgG_5.raw IPI:IPI00966528.1 474 51.0 8.38 51 kDa protein 3.38 1 1 10.56 3.38 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATSTATSGFAGAIGQK IPI:IPI00966528.1 8 1 CID 73.52 4.64 1.00 1 2 734.37524 1467.74321 -0.45 29.12 5932 5932 MS2 17/30 Linfeng_081211_IgG_3.raw IPI:IPI00967533.1 222 25.2 9.57 Putative uncharacterized protein TMEM33 5.41 1 1 4.09 5.41 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALLANALTSALR IPI:IPI00967533.1 2 1 CID 91.38 4.09 1.00 1 2 607.36676 1213.72624 -0.10 40.54 9727 9727 MS2 18/22 Linfeng_081211_IgG_8.raw IPI:IPI00968120.1 872 98.0 6.74 "cDNA FLJ55710, highly similar to Kinesin family member 20A" 7.34 5 4 28.49 1.61 1 1 40.88 7.34 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FTFSQIFGPEVGQASFFNLTVK IPI:IPI00968120.1 4 1 CID 142.39 7.22 1.00 1 3 822.09058 2464.25718 0.95 52.94 5761 5761 MS2 36/84 Linfeng_091611_rIgG_3.raw High DEKIEELEALLQEAR IPI:IPI00968120.1 2 1 CID 80.76 5.94 1.00 1 3 595.97760 1785.91825 -2.65 44.38 4701 4701 MS2 40/56 Linfeng_091611_rIgG_3.raw High ILHLQGEGDIVPK IPI:IPI00968120.1 2 1 CID 60.30 5.63 1.00 1 3 473.60358 1418.79618 -2.88 30.00 2878 2878 MS2 29/48 Linfeng_091611_rIgG_3.raw High LAASASTQQLQEVK 2 0 CID 62.32 4.70 1.00 1 2 737.39862 1473.78996 -0.57 26.52 5161 5161 MS2 16/26 Linfeng_081211_IgG_3.raw High LAASASTQQLQEVK IPI:IPI00968120.1 2 1 CID 56.13 4.51 1.00 1 2 737.39819 1473.78911 -1.15 24.77 2190 2190 MS2 19/26 Linfeng_091611_rIgG_3.raw IPI:IPI00968217.1 788 88.8 6.20 NOP14 protein 1.78 1 1 25.67 1.78 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EDVATWQQSSLSLR IPI:IPI00968217.1 3 1 CID 87.92 4.14 1.00 1 2 810.40411 1619.80095 -0.92 35.74 8416 8416 MS2 16/26 Linfeng_081211_IgG_3.raw IPI:IPI00001639.2 876 97.1 4.78 Importin subunit beta-1 3.08 2 2 19.40 3.08 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LAATNALLNSLEFTK IPI:IPI00001639.2 2 1 CID 61.93 4.69 1.00 1 2 803.44800 1605.88872 2.49 44.07 11225 11225 MS2 18/28 Linfeng_081211_IgG_3.raw High VLANPGNSQVAR IPI:IPI00001639.2 1 1 CID 84.47 3.78 1.00 1 2 613.33612 1225.66496 0.12 22.25 3698 3698 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00002902.5 702 79.3 9.13 Nucleolar protein 9 3.70 2 2 19.47 3.70 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LAAFADALEFADEEK IPI:IPI00002902.5 1 1 CID 58.59 4.72 1.00 1 2 820.39844 1639.78960 2.75 44.14 11251 11251 MS2 19/28 Linfeng_081211_IgG_3.raw High NNYENYIDIVK IPI:IPI00002902.5 1 1 CID 37.57 3.62 1.00 1 2 692.84021 1384.67314 -0.87 36.24 8573 8573 MS2 14/20 Linfeng_081211_IgG_3.raw IPI:IPI00004290.3 756 87.0 5.88 Digestive organ expansion factor homolog 3.04 2 2 26.81 3.04 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High mEAENLASVIDAR IPI:IPI00004290.3 1 1 CID M1(Oxidation) 51.01 3.93 1.00 1 2 717.84534 1434.68340 -4.19 34.97 8139 8139 MS2 15/24 Linfeng_081211_IgG_3.raw High AIQAVATNPK IPI:IPI00004290.3 1 1 CID 47.92 3.56 1.00 1 2 506.79260 1012.57793 -0.68 21.18 3322 3322 MS2 14/18 Linfeng_081211_IgG_3.raw IPI:IPI00005511.1 110 12.4 8.41 PHD finger-like domain-containing protein 5A 26.36 3 2 16.96 26.36 2 2 11.92 11.82 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cVIcGGPGVSDAYYcK IPI:IPI00005511.1 1 1 CID "C1(Carbamidomethyl), C4(Carbamidomethyl), C15(Carbamidomethyl)" 85.29 4.60 1.00 1 2 903.38538 1805.76348 -1.18 30.37 6246 6246 MS2 22/30 Linfeng_081211_IgG_10.raw High IcDEcNYGSYQGR 1 0 CID "C2(Carbamidomethyl), C5(Carbamidomethyl)" 109.98 4.45 1.00 1 2 811.31897 1621.63066 -3.91 23.60 2312 2312 MS2 20/24 Linfeng_091811_SIN3A_10.raw High IcDEcNYGSYQGR IPI:IPI00005511.1 1 1 CID "C2(Carbamidomethyl), C5(Carbamidomethyl)" 90.71 3.85 1.00 1 2 811.32166 1621.63603 -0.60 23.83 4254 4254 MS2 17/24 Linfeng_081211_IgG_10.raw IPI:IPI00005531.1 382 45.9 6.06 Isoform 1 of Probable DNA dC->dU-editing enzyme APOBEC-3B 11.52 3 3 28.36 7.07 2 2 14.68 4.45 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLDLVPSLQLDPAQIYR IPI:IPI00013876.1 4 1 CID 28.14 4.85 1.00 1 3 663.36530 1988.08133 -1.96 48.78 5727 5727 MS2 24/64 Linfeng_091611_rIgG_7.raw High DTFYDNFENEPILYGR IPI:IPI00447705.1 6 1 CID 59.22 3.87 1.00 1 2 996.95416 1992.90105 1.80 42.54 10319 10319 MS2 15/30 Linfeng_081211_IgG_7.raw High SNLLWDTGVFR IPI:IPI00447705.1 6 1 CID 52.08 3.54 1.00 1 2 654.34204 1307.67681 1.90 42.58 10336 10336 MS2 16/20 Linfeng_081211_IgG_7.raw IPI:IPI00006442.1 576 62.6 9.07 Coilin 6.94 5 3 28.59 5.21 2 2 39.86 4.17 2 2 34.63 1.74 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLELTSSYSPDVSDYK IPI:IPI00006442.1 1 1 CID 75.19 4.25 1.00 1 2 908.94525 1816.88323 -1.06 36.56 8149 8149 MS2 16/30 Linfeng_081211_IgG_4.raw High VVTDLISLIR IPI:IPI00006442.1 1 1 CID 59.45 4.24 1.00 1 2 564.85120 1128.69512 -3.21 43.40 5205 5205 MS2 17/18 Linfeng_091611_rIgG_4.raw High VVTDLISLIR 1 0 CID 70.52 4.20 1.00 1 2 564.85150 1128.69573 -2.67 43.66 5175 5175 MS2 17/18 Linfeng_091811_SIN3A_4.raw High NSSTIIQNPVETPK IPI:IPI00006442.1 1 1 CID 56.99 4.14 1.00 1 2 764.40112 1527.79497 -4.19 28.02 3191 3191 MS2 16/26 Linfeng_091611_rIgG_4.raw High NSSTIIQNPVETPK IPI:IPI00006442.1 1 1 CID 56.28 3.87 1.00 1 2 764.40607 1527.80486 2.28 28.69 5611 5611 MS2 15/26 Linfeng_081211_IgG_4.raw IPI:IPI00008477.1 747 85.6 9.23 Targeting protein for Xklp2 3.08 2 2 48.85 3.08 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LALAGIGQPVK IPI:IPI00008477.1 2 1 CID 21.77 3.93 1.00 1 2 533.83398 1066.66069 -1.20 33.51 7583 7583 MS2 15/20 Linfeng_081211_IgG_3.raw High STAELEAEELEK IPI:IPI00008477.1 2 1 CID 34.55 3.64 1.00 1 2 674.82678 1348.64629 -1.20 29.66 6147 6147 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00008530.1 317 34.3 5.97 60S acidic ribosomal protein P0 17.98 4 4 38.17 10.09 2 2 29.36 7.89 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TSFFQALGITTK IPI:IPI00791448.1 8 1 CID 82.89 4.70 1.00 1 2 657.35718 1313.70708 -2.25 43.68 5155 5155 MS2 18/22 Linfeng_091811_SIN3A_6.raw High AGAIAPcEVTVPAQNTGLGPEK IPI:IPI00797741.1 9 1 CID C7(Carbamidomethyl) 4.30 4.34 1.00 1 3 727.37231 2180.10239 0.31 31.93 6754 6754 MS2 24/84 Linfeng_081211_IgG_6.raw High GTIEILSDVQLIK IPI:IPI00791448.1 3 1 CID 47.14 4.31 1.00 1 2 714.91699 1428.82671 -2.93 43.03 5073 5073 MS2 17/24 Linfeng_091811_SIN3A_6.raw High IIQLLDDYPK IPI:IPI00797741.1 10 1 CID 69.95 3.51 1.00 1 2 609.34326 1217.67925 1.30 37.50 8649 8649 MS2 15/18 Linfeng_081211_IgG_6.raw IPI:IPI00009104.7 463 51.1 5.64 RuvB-like 2 5.83 2 2 15.29 5.83 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TQGFLALFSGDTGEIK IPI:IPI00009104.7 1 1 CID 53.84 4.86 1.00 1 2 842.43402 1683.86077 1.10 45.56 10710 10710 MS2 17/30 Linfeng_081211_IgG_5.raw High GLGLDDALEPR IPI:IPI00009104.7 2 1 CID 27.95 3.58 1.00 1 2 578.30273 1155.59819 -2.00 34.69 7597 7597 MS2 15/20 Linfeng_081211_IgG_5.raw IPI:IPI00009650.1 176 19.2 5.58 Lipocalin-1 6.25 2 1 20.51 6.25 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NNLEALEDFEK IPI:IPI00009650.1 1 1 CID 25.61 3.58 1.00 1 2 661.31708 1321.62688 -0.17 35.89 8120 8120 MS2 13/20 Linfeng_081211_IgG_6.raw High NNLEALEDFEK IPI:IPI00009650.1 1 1 CID 60.82 3.50 1.00 1 2 661.31604 1321.62480 -1.74 35.53 7906 7906 MS2 16/20 Linfeng_081211_IgG_5.raw IPI:IPI00010214.1 104 11.7 5.24 Protein S100-A14 25.00 2 2 23.24 25.00 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SANAEDAQEFSDVER IPI:IPI00010214.1 1 1 CID 112.59 5.18 1.00 1 2 834.35974 1667.71221 -1.33 27.12 5191 5191 MS2 22/28 Linfeng_081211_IgG_10.raw High SFWELIGEAAK IPI:IPI00010214.1 1 1 CID 39.44 3.52 1.00 1 2 625.82666 1250.64604 3.53 44.82 10924 10924 MS2 13/20 Linfeng_081211_IgG_10.raw IPI:IPI00013296.3 152 17.7 10.99 40S ribosomal protein S18 15.79 4 2 23.25 7.89 2 1 43.44 15.79 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YSQVLANGLDNK IPI:IPI00013296.3 1 1 CID 27.27 4.61 1.00 1 2 661.33905 1321.67082 -2.93 27.36 2905 2905 MS2 16/22 Linfeng_091611_rIgG_9.raw High RAGELTEDEVER IPI:IPI00013296.3 1 1 CID 27.40 4.61 1.00 1 3 468.56284 1403.67395 -1.59 20.62 1985 1985 MS2 22/44 Linfeng_091611_rIgG_9.raw High YSQVLANGLDNK 1 0 CID 42.13 3.72 1.00 1 2 661.34015 1321.67302 -1.27 31.00 5016 5016 MS2 15/22 Linfeng_081211_IgG_9.raw High YSQVLANGLDNK 1 0 CID 43.72 3.68 1.00 1 2 661.34052 1321.67375 -0.72 30.65 4945 4945 MS2 14/22 Linfeng_081211_IgG_9.raw IPI:IPI00013830.1 536 61.5 9.52 SNW domain-containing protein 1 7.09 3 3 56.40 4.29 2 2 29.18 2.80 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YTPSQQGVAFNSGAK IPI:IPI00013830.1 2 1 CID 70.84 4.27 1.00 1 2 777.87909 1554.75090 -2.48 25.06 2728 2728 MS2 21/28 Linfeng_091811_SIN3A_4.raw High LAEALYIADR IPI:IPI00943237.1 3 1 CID 44.66 4.12 1.00 1 2 567.81128 1134.61528 -0.11 32.60 6930 6930 MS2 17/18 Linfeng_081211_IgG_4.raw High GLQTVHINENFAK IPI:IPI00943237.1 3 1 CID 47.38 3.70 1.00 1 2 735.88812 1470.76897 -0.71 29.29 5823 5823 MS2 14/24 Linfeng_081211_IgG_4.raw IPI:IPI00016494.2 638 74.5 8.38 Isoform 2 of Nucleolar protein 10 6.43 4 3 36.37 3.76 2 2 17.87 2.66 1 1 27.73 2.66 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLENLGLTHLIGSPFLR 2 0 CID 43.64 5.21 1.00 1 3 632.34961 1895.03427 -2.29 46.69 4994 4994 MS2 24/64 Linfeng_091611_rIgG_3.raw High DLENLGLTHLIGSPFLR IPI:IPI00016494.2 2 1 CID 60.29 4.77 1.00 1 3 632.35004 1895.03556 -1.61 46.86 5556 5556 MS2 26/64 Linfeng_091811_SIN3A_3.raw High DGQYILATGTYKPR IPI:IPI00016494.2 2 1 CID 38.95 4.07 1.00 1 2 791.91370 1582.82012 -1.46 30.97 6627 6627 MS2 12/26 Linfeng_081211_IgG_3.raw High cYDTYQLSLK IPI:IPI00016494.2 2 1 CID C1(Carbamidomethyl) 50.70 3.67 1.00 1 2 645.80493 1290.60259 -0.70 32.91 7361 7361 MS2 14/18 Linfeng_081211_IgG_3.raw IPI:IPI00016610.2 356 37.5 7.09 Poly(rC)-binding protein 1 14.61 5 3 31.31 8.71 2 2 28.26 5.62 1 1 33.41 11.52 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ESTGAQVQVAGDmLPNSTER 15 0 CID M13(Oxidation) 88.96 6.83 1.00 1 3 702.66174 2105.97068 -2.95 27.38 3045 3045 MS2 37/76 Linfeng_091611_rIgG_6.raw High QVTITGSAASISLAQYLINAR IPI:IPI00016610.2 1 1 CID 58.19 6.65 1.00 1 3 726.40131 2177.18937 -1.46 46.69 5529 5529 MS2 22/80 Linfeng_091811_SIN3A_6.raw High ESTGAQVQVAGDmLPNSTER IPI:IPI00016610.2 15 1 CID M13(Oxidation) 60.34 6.32 1.00 1 3 702.66022 2105.96610 -5.13 27.47 3044 3044 MS2 35/76 Linfeng_091811_SIN3A_6.raw High ESTGAQVQVAGDmLPNSTER IPI:IPI00788837.2 15 1 CID M13(Oxidation) 32.36 5.87 1.00 1 3 702.66223 2105.97214 -2.26 27.50 5291 5291 MS2 26/76 Linfeng_081211_IgG_6.raw High INISEGNcPER IPI:IPI00788837.2 15 1 CID C8(Carbamidomethyl) 72.25 3.64 1.00 1 2 644.79956 1288.59184 -2.52 23.04 4033 4033 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00017339.1 424 44.4 8.56 Splicing factor 3B subunit 4 7.31 5 2 23.50 3.30 2 1 7.40 4.01 1 1 12.72 7.31 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLYDTFSAFGVILQTPK IPI:IPI00017339.1 2 1 CID 60.57 5.82 1.00 1 3 638.35126 1913.03922 -1.43 50.60 6212 6212 MS2 28/64 Linfeng_091811_SIN3A_5.raw High LLYDTFSAFGVILQTPK 2 0 CID 50.15 5.48 1.00 1 3 638.35138 1913.03958 -1.24 50.33 6027 6027 MS2 25/64 Linfeng_091611_rIgG_5.raw High NQDATVYVGGLDEK IPI:IPI00017339.1 1 1 CID 81.80 5.15 1.00 1 2 754.86133 1508.71538 -4.91 29.55 3446 3446 MS2 23/26 Linfeng_091811_SIN3A_5.raw High NQDATVYVGGLDEK 1 0 CID 69.92 4.92 1.00 1 2 754.86462 1508.72197 -0.54 29.85 6070 6070 MS2 19/26 Linfeng_081211_IgG_6.raw High NQDATVYVGGLDEK 1 0 CID 81.35 4.73 1.00 1 2 754.86444 1508.72161 -0.79 30.00 5942 5942 MS2 22/26 Linfeng_081211_IgG_5.raw IPI:IPI00017870.1 499 55.1 4.91 Keratin-8-like protein 1 4.01 2 2 132.89 4.01 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LSELEAALQR IPI:IPI00017870.1;IPI:IPI00793917.1 4 2 CID 43.18 3.67 1.00 1 2 565.31329 1129.61931 -1.69 33.15 7184 7184 MS2 13/18 Linfeng_081211_IgG_6.raw High YEELQTLAGK IPI:IPI00017870.1 1 1 CID 41.70 3.56 1.00 1 2 576.30035 1151.59343 -0.77 29.69 6156 6156 MS2 14/18 Linfeng_081211_IgG_3.raw IPI:IPI00018288.1 275 31.4 4.92 DNA-directed RNA polymerase II subunit RPB3 6.18 2 1 29.27 6.18 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DNDPNDYVEQDDILIVK IPI:IPI00018288.1 2 1 CID 19.04 4.71 1.00 1 3 668.98419 2004.93802 -0.86 39.01 9145 9145 MS2 27/64 Linfeng_081211_IgG_7.raw High DNDPNDYVEQDDILIVK IPI:IPI00018288.1 2 1 CID 44.93 4.44 1.00 1 2 1002.97272 2004.93816 -0.79 38.98 9136 9136 MS2 17/32 Linfeng_081211_IgG_7.raw IPI:IPI00020127.1 616 68.1 7.21 Replication protein A 70 kDa DNA-binding subunit 4.22 2 2 40.19 4.22 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGGVGGSNTNWK IPI:IPI00020127.1 1 1 CID 52.43 3.82 1.00 1 2 582.27594 1163.54460 0.49 21.66 3405 3405 MS2 15/22 Linfeng_081211_IgG_4.raw High LFSLELVDESGEIR IPI:IPI00020127.1 1 1 CID 43.45 3.74 1.00 1 2 803.92114 1606.83501 1.65 42.76 10008 10008 MS2 13/26 Linfeng_081211_IgG_4.raw IPI:IPI00020194.1 589 61.5 8.02 Isoform Short of TATA-binding protein-associated factor 2N 8.15 5 2 52.64 2.38 2 1 41.98 8.15 2 2 26.87 2.38 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GEATVSFDDPPSAK 9 0 CID 91.06 4.92 1.00 1 2 710.82831 1420.64934 -6.90 27.10 3011 3011 MS2 20/26 Linfeng_091811_SIN3A_4.raw High TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK IPI:IPI00020194.1 2 1 CID 102.99 4.81 1.00 1 3 1208.19995 3622.58530 -2.44 45.86 5513 5513 MS2 27/132 Linfeng_091611_rIgG_4.raw High GEATVSFDDPPSAK IPI:IPI00020194.1;IPI:IPI00909890.1 9 2 CID 89.78 4.80 1.00 1 2 710.82727 1420.64726 -8.36 26.80 3026 3026 MS2 20/26 Linfeng_091611_rIgG_4.raw High GEATVSFDDPPSAK 9 0 CID 84.59 4.49 1.00 1 2 710.83289 1420.65849 -0.46 27.89 5182 5182 MS2 19/26 Linfeng_081211_IgG_5.raw High GEATVSFDDPPSAK 9 0 CID 57.20 4.47 1.00 1 2 710.83276 1420.65825 -0.63 27.56 5248 5248 MS2 16/26 Linfeng_081211_IgG_4.raw IPI:IPI00021417.3 800 90.2 6.13 U4/U6.U5 tri-snRNP-associated protein 1 4.00 2 2 42.10 4.00 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EAAGTTAAAGTGGATEQPPR IPI:IPI00021417.3 2 1 CID 32.41 3.84 1.00 1 2 907.43915 1813.87102 1.88 21.24 3346 3346 MS2 17/38 Linfeng_081211_IgG_3.raw High LQAQSLSTVGPR IPI:IPI00021417.3 1 1 CID 49.16 3.82 1.00 1 2 628.85046 1256.69365 -1.70 27.62 5492 5492 MS2 18/22 Linfeng_081211_IgG_3.raw IPI:IPI00021924.1 213 22.5 10.76 Histone H1x 10.33 2 2 44.05 10.33 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YSQLVVETIR IPI:IPI00021924.1 1 1 CID 74.93 4.03 1.00 1 2 604.33734 1207.66741 -0.62 32.33 6861 6861 MS2 17/18 Linfeng_081211_IgG_7.raw High ALVQNDTLLQVK IPI:IPI00021924.1 1 1 CID 63.84 3.88 1.00 1 2 671.38971 1341.77214 -1.16 33.56 7312 7312 MS2 18/22 Linfeng_081211_IgG_7.raw IPI:IPI00029631.1 104 12.3 5.92 Enhancer of rudimentary homolog 16.35 6 1 22.29 16.35 2 1 35.56 16.35 4 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TYADYESVNEcmEGVcK IPI:IPI00029631.1 1 1 CID "C11(Carbamidomethyl), M12(Oxidation), C16(Carbamidomethyl)" 94.21 6.42 1.00 1 3 690.93640 2070.79465 -6.93 27.18 2806 2806 MS2 31/64 Linfeng_091811_SIN3A_10.raw High TYADYESVNEcMEGVcK IPI:IPI00029631.1 1 1 CID "C11(Carbamidomethyl), C16(Carbamidomethyl)" 105.69 6.40 1.00 1 3 685.60724 2054.80716 -3.37 31.98 3459 3459 MS2 36/64 Linfeng_091811_SIN3A_10.raw High TYADYESVNEcmEGVcK IPI:IPI00029631.1 1 1 CID "C11(Carbamidomethyl), M12(Oxidation), C16(Carbamidomethyl)" 128.54 5.63 1.00 1 2 1035.90100 2070.79473 -6.89 27.23 2812 2812 MS2 21/32 Linfeng_091811_SIN3A_10.raw High TYADYESVNEcMEGVcK IPI:IPI00029631.1 1 1 CID "C11(Carbamidomethyl), C16(Carbamidomethyl)" 153.53 4.83 1.00 1 2 1027.90857 2054.80986 -2.05 31.96 3457 3457 MS2 23/32 Linfeng_091811_SIN3A_10.raw High TYADYESVNEcmEGVcK 1 0 CID "C11(Carbamidomethyl), M12(Oxidation), C16(Carbamidomethyl)" 68.00 4.78 1.00 1 2 1035.90649 2070.80571 -1.59 27.30 5243 5243 MS2 20/32 Linfeng_081211_IgG_10.raw High TYADYESVNEcMEGVcK 1 0 CID "C11(Carbamidomethyl), C16(Carbamidomethyl)" 143.64 4.08 1.00 1 2 1027.90784 2054.80840 -2.77 31.89 6748 6748 MS2 24/32 Linfeng_081211_IgG_10.raw IPI:IPI00031812.3 324 35.9 9.88 Nuclease-sensitive element-binding protein 1 17.28 3 3 13.46 10.19 2 2 7.13 7.10 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EDGNEEDKENQGDETQGQQPPQR IPI:IPI00479509.2 3 1 CID 61.41 5.50 1.00 1 3 876.70410 2628.09775 -2.44 16.83 1674 1674 MS2 28/88 Linfeng_091811_SIN3A_5.raw High GAEAANVTGPGGVPVQGSK IPI:IPI00450235.1 3 1 CID 89.73 5.47 1.00 1 2 848.43475 1695.86223 -2.31 25.03 4338 4338 MS2 22/36 Linfeng_081211_IgG_5.raw High NYQQNYQNSESGEK IPI:IPI00450235.1 6 1 CID 62.40 3.69 1.00 1 2 844.86023 1688.71318 -0.91 19.28 2627 2627 MS2 16/26 Linfeng_081211_IgG_5.raw IPI:IPI00032056.4 340 38.9 7.33 Isoform 2 of Uncharacterized protein C17orf85 7.65 2 2 12.94 7.65 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALIGDDVGLTSYK IPI:IPI00032056.4 2 1 CID 54.36 3.63 1.00 1 2 676.35925 1351.71123 0.59 35.50 8330 8330 MS2 15/24 Linfeng_081211_IgG_3.raw High APGAEEDDSELQR IPI:IPI00032056.4 2 1 CID 73.48 3.61 1.00 1 2 708.81494 1416.62261 -0.86 22.43 3759 3759 MS2 15/24 Linfeng_081211_IgG_3.raw IPI:IPI00032460.3 95 10.8 6.52 U6 snRNA-associated Sm-like protein LSm2 31.58 2 2 20.17 31.58 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YVQLPADEVDTQLLQDAAR IPI:IPI00032460.3 1 1 CID 83.77 5.57 1.00 1 2 1073.04553 2145.08379 0.68 39.84 9356 9356 MS2 25/36 Linfeng_081211_IgG_10.raw High LTDISVTDPEK IPI:IPI00032460.3 1 1 CID 51.22 3.94 1.00 1 2 609.31519 1217.62309 -2.41 27.76 5374 5374 MS2 16/20 Linfeng_081211_IgG_10.raw IPI:IPI00032827.1 125 14.6 9.38 Pre-mRNA branch site protein p14 40.80 7 4 21.10 20.00 2 2 11.92 22.40 2 2 24.38 32.00 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GTAYVVYEDIFDAK IPI:IPI00032827.1 1 1 CID 90.18 5.82 1.00 1 3 530.92615 1590.76389 -3.01 42.41 4800 4800 MS2 28/52 Linfeng_091811_SIN3A_10.raw High NAcDHLSGFNVcNR IPI:IPI00032827.1 1 1 CID "C3(Carbamidomethyl), C12(Carbamidomethyl)" 30.33 5.30 1.00 1 3 555.23639 1663.69461 -7.11 27.41 2837 2837 MS2 25/52 Linfeng_091811_SIN3A_10.raw High NAcDHLSGFNVcNR 1 0 CID "C3(Carbamidomethyl), C12(Carbamidomethyl)" 49.32 5.20 1.00 1 3 555.23853 1663.70102 -3.26 26.95 2643 2643 MS2 26/52 Linfeng_091611_rIgG_10.raw High NAcDHLSGFNVcNR IPI:IPI00032827.1 1 1 CID "C3(Carbamidomethyl), C12(Carbamidomethyl)" 39.32 5.08 1.00 1 3 555.23877 1663.70176 -2.82 27.68 5351 5351 MS2 29/52 Linfeng_081211_IgG_10.raw High ITAEEMYDIFGK IPI:IPI00032827.1 1 1 CID 92.24 4.62 1.00 1 2 708.83746 1416.66765 -2.80 42.27 4783 4783 MS2 19/22 Linfeng_091811_SIN3A_10.raw High GTAYVVYEDIFDAK 1 0 CID 51.07 4.61 1.00 1 3 530.92664 1590.76535 -2.09 42.16 4582 4582 MS2 26/52 Linfeng_091611_rIgG_10.raw High YLVVLYYNANR IPI:IPI00032827.1 1 1 CID 43.07 4.32 1.00 1 2 694.37201 1387.73674 -0.10 37.65 8596 8596 MS2 17/20 Linfeng_081211_IgG_10.raw IPI:IPI00154590.6 293 34.2 9.88 MKI67 FHA domain-interacting nucleolar phosphoprotein 10.92 2 2 39.35 10.92 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVDSQGPTPVcTPTFLER IPI:IPI00154590.6 3 1 CID C11(Carbamidomethyl) 96.37 4.79 1.00 1 2 1002.98669 2004.96611 -1.74 35.18 7900 7900 MS2 18/34 Linfeng_081211_IgG_6.raw High IVAETmNNYLFGER IPI:IPI00154590.6 4 1 CID M6(Oxidation) 71.19 4.40 1.00 1 2 836.90356 1672.79985 -0.09 33.94 7459 7459 MS2 17/26 Linfeng_081211_IgG_6.raw IPI:IPI00170548.1 1390 158.5 6.32 Isoform 1 of ATPase family AAA domain-containing protein 2 1.80 2 2 78.60 1.80 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SQVEQQQLITVEK IPI:IPI00170548.1 1 1 CID 63.65 4.69 1.00 1 2 765.41150 1529.81572 -0.85 29.48 5564 5564 MS2 20/24 Linfeng_081211_IgG_2.raw High mEQEVENFScSR IPI:IPI00170548.1 1 1 CID "M1(Oxidation), C10(Carbamidomethyl)" 54.63 3.89 1.00 1 2 766.31177 1531.61626 0.66 25.69 4521 4521 MS2 14/22 Linfeng_081211_IgG_2.raw IPI:IPI00181728.1 353 41.4 9.92 Ribosome biogenesis protein BRX1 homolog 17.00 7 5 47.30 6.52 2 2 44.08 9.92 3 2 48.16 7.08 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IFQGSFGGPTLYENPHYQSPNmHR IPI:IPI00181728.1 1 1 CID M22(Oxidation) 35.86 5.25 1.00 1 4 699.07391 2793.27382 -3.61 31.70 3626 3626 MS2 34/138 Linfeng_091611_rIgG_6.raw High HATAEEVEEEERDR IPI:IPI00181728.1 1 1 CID 128.87 4.56 1.00 1 3 567.25366 1699.74643 -3.21 19.23 1898 1898 MS2 27/52 Linfeng_091811_SIN3A_6.raw High ELLIQIFSTPR IPI:IPI00181728.1 1 1 CID 61.09 4.34 1.00 1 2 658.88196 1316.75664 -0.52 45.60 5420 5420 MS2 16/20 Linfeng_091611_rIgG_6.raw High ELLIQIFSTPR IPI:IPI00181728.1 1 1 CID 54.88 4.32 1.00 1 2 658.88147 1316.75566 -1.26 45.85 5426 5426 MS2 16/20 Linfeng_091811_SIN3A_6.raw High HATAEEVEEEER IPI:IPI00181728.1 1 1 CID 28.84 4.26 1.00 1 3 476.87863 1428.62134 -1.73 18.93 2772 2772 MS2 21/44 Linfeng_081211_IgG_6.raw High ELLIQIFSTPR IPI:IPI00181728.1 1 1 CID 70.02 4.24 1.00 1 2 658.88232 1316.75737 0.04 45.47 5323 5323 MS2 16/20 Linfeng_091611_rIgG_7.raw High LFVINEVcEmK IPI:IPI00181728.1 1 1 CID "C8(Carbamidomethyl), M10(Oxidation)" 45.10 3.87 1.00 1 2 699.34454 1397.68181 1.00 34.86 7792 7792 MS2 14/20 Linfeng_081211_IgG_6.raw IPI:IPI00217030.10 263 29.6 10.15 "40S ribosomal protein S4, X isoform" 22.43 4 4 39.98 11.41 2 2 41.70 6.46 1 1 53.91 4.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FDTGNLcmVTGGANLGR IPI:IPI00217030.10 1 1 CID "C7(Carbamidomethyl), M8(Oxidation)" 150.00 4.99 1.00 1 2 899.91473 1798.82219 0.56 33.80 7399 7399 MS2 20/32 Linfeng_081211_IgG_7.raw High TDITYPAGFmDVISIDK IPI:IPI00877922.1 2 1 CID M10(Oxidation) 14.46 4.86 1.00 1 2 951.46167 1901.91606 -2.17 41.12 4774 4774 MS2 11/32 Linfeng_091611_rIgG_7.raw High VNDTIQIDLETGK IPI:IPI00217030.10 1 1 CID 46.00 4.71 1.00 1 2 723.37799 1445.74870 0.29 33.60 7322 7322 MS2 19/24 Linfeng_081211_IgG_7.raw High LREcLPLIIFLR IPI:IPI00877922.1 3 1 CID C4(Carbamidomethyl) 52.48 4.49 1.00 1 3 514.97705 1542.91660 -1.52 45.84 5205 5205 MS2 23/44 Linfeng_091811_SIN3A_7.raw IPI:IPI00217240.1 830 94.4 5.96 WD repeat-containing protein 75 4.58 5 3 39.74 1.57 2 1 26.98 3.01 2 2 23.19 1.33 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NLEASAVIQGLVK IPI:IPI00217240.1 1 1 CID 56.06 5.20 1.00 1 2 671.39014 1341.77300 -0.53 40.76 10102 10102 MS2 21/24 Linfeng_081211_IgG_3.raw High ELSFVLDYINQSPK IPI:IPI00217240.1 1 1 CID 92.77 4.67 1.00 1 2 826.92816 1652.84905 -2.43 43.90 4642 4642 MS2 16/26 Linfeng_091611_rIgG_3.raw High NLEASAVIQGLVK IPI:IPI00217240.1 1 1 CID 58.10 4.41 1.00 1 2 671.39099 1341.77471 0.74 39.51 9114 9114 MS2 19/24 Linfeng_081211_IgG_4.raw High LWDYIDGILIK IPI:IPI00217240.1 1 1 CID 62.03 4.29 1.00 1 2 674.87787 1348.74846 -2.01 45.55 4849 4849 MS2 17/20 Linfeng_091611_rIgG_3.raw High LWDYIDGILIK 1 0 CID 54.41 4.16 1.00 1 2 674.87891 1348.75054 -0.47 45.77 5417 5417 MS2 14/20 Linfeng_091811_SIN3A_3.raw IPI:IPI00219806.7 101 11.5 6.77 Protein S100-A7 10.89 2 1 33.92 10.89 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GTNYLADVFEK IPI:IPI00219806.7 1 1 CID 58.52 4.03 1.00 1 2 628.81122 1256.61516 -0.50 38.54 9116 9116 MS2 16/20 Linfeng_081211_IgG_8.raw High GTNYLADVFEK IPI:IPI00219806.7 1 1 CID 67.18 3.78 1.00 1 2 628.81274 1256.61821 1.93 38.39 8852 8852 MS2 16/20 Linfeng_081211_IgG_10.raw IPI:IPI00220528.6 86 9.7 4.67 Small nuclear ribonucleoprotein F 15.12 3 1 11.15 15.12 2 1 8.07 15.12 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVEEEEEDGEmRE IPI:IPI00220528.6 1 1 CID M11(Oxidation) 92.03 4.28 1.00 1 2 777.29736 1553.58745 -2.21 18.66 2663 2663 MS2 17/24 Linfeng_081211_IgG_10.raw High GVEEEEEDGEmRE 1 0 CID M11(Oxidation) 70.57 4.14 1.00 1 2 777.29730 1553.58733 -2.29 19.12 1683 1683 MS2 19/24 Linfeng_091811_SIN3A_10.raw High GVEEEEEDGEmRE IPI:IPI00220528.6 1 1 CID M11(Oxidation) 85.43 3.66 1.00 1 2 777.29889 1553.59050 -0.25 20.17 3098 3098 MS2 18/24 Linfeng_081211_IgG_10.raw IPI:IPI00220716.2 957 104.7 10.08 Isoform 2 of Putative RNA-binding protein 15 2.61 2 2 66.81 2.61 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QAAGVISLPVGGNK IPI:IPI00220716.2 3 1 CID 53.95 3.53 1.00 1 2 655.87451 1310.74175 -0.77 33.24 7475 7475 MS2 14/26 Linfeng_081211_IgG_3.raw High VGAGAGAAPFR IPI:IPI00220716.2 3 1 CID 35.47 3.51 1.00 1 2 487.26392 973.52056 -0.93 25.31 4755 4755 MS2 13/20 Linfeng_081211_IgG_3.raw IPI:IPI00291467.7 298 32.8 9.74 ADP/ATP translocase 3 8.05 2 2 41.29 8.05 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DFLAGGIAAAISK IPI:IPI00291467.7 2 1 CID 89.44 4.80 1.00 1 2 617.34570 1233.68413 0.23 41.82 10094 10094 MS2 21/24 Linfeng_081211_IgG_7.raw High AAYFGVYDTAK IPI:IPI00291467.7 3 1 CID 65.76 3.65 1.00 1 2 603.29486 1205.58245 -1.08 32.48 6917 6917 MS2 16/20 Linfeng_081211_IgG_7.raw IPI:IPI00297900.4 875 100.8 8.63 Probable ATP-dependent RNA helicase DDX10 6.63 5 4 58.31 2.86 2 2 47.39 2.17 1 1 64.68 3.77 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TLAFLVPVLEALYR IPI:IPI00297900.4 1 1 CID 69.33 5.83 1.00 1 3 535.65222 1604.94211 0.62 55.02 6477 6477 MS2 30/52 Linfeng_091811_SIN3A_3.raw High ILDmGFADTMNAVIENLPK 2 0 CID M4(Oxidation) 44.46 5.08 1.00 1 3 703.35089 2108.03812 -1.07 51.44 5579 5579 MS2 32/72 Linfeng_091611_rIgG_3.raw High ILDmGFADTMNAVIENLPK IPI:IPI00297900.4 2 1 CID M4(Oxidation) 69.91 4.77 1.00 1 3 703.35217 2108.04197 0.76 51.78 6160 6160 MS2 33/72 Linfeng_091811_SIN3A_3.raw High APSLTNDEVEEFR IPI:IPI00908600.1 2 1 CID 82.91 4.03 1.00 1 2 753.85675 1506.70622 -0.62 32.90 7356 7356 MS2 18/24 Linfeng_081211_IgG_3.raw High AAVLFATDIAAR IPI:IPI00908600.1 2 1 CID 47.69 3.74 1.00 1 2 609.84454 1218.68181 -1.94 37.36 8959 8959 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00297954.1 159 17.8 9.91 Protein FAM87B 11.32 2 1 21.81 11.32 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EHFSSMDSFQLREAGGTR IPI:IPI00297954.1 3 1 CID 26.91 3.60 1.00 1 2 1027.96533 2054.92339 -5.63 35.02 7719 7719 MS2 8/34 Linfeng_081211_IgG_5.raw High EHFSSMDSFQLREAGGTR IPI:IPI00297954.1 3 1 CID 27.74 3.47 1.00 1 2 1027.96545 2054.92363 -5.51 35.16 7891 7891 MS2 10/34 Linfeng_081211_IgG_6.raw IPI:IPI00302850.4 119 13.3 11.56 Small nuclear ribonucleoprotein Sm D1 27.73 7 2 18.29 10.92 2 1 25.19 16.81 2 1 20.11 27.73 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YFILPDSLPLDTLLVDVEPK 1 0 CID 92.83 6.86 1.00 1 3 763.08923 2287.25315 2.56 54.85 6121 6121 MS2 29/76 Linfeng_091611_rIgG_10.raw High YFILPDSLPLDTLLVDVEPK IPI:IPI00302850.4 1 1 CID 105.14 6.07 1.00 1 3 763.08777 2287.24875 0.64 54.95 6269 6269 MS2 30/76 Linfeng_091811_SIN3A_10.raw High YFILPDSLPLDTLLVDVEPK IPI:IPI00302850.4 1 1 CID 106.79 5.82 1.00 1 2 1144.12891 2287.25054 1.42 54.96 6271 6271 MS2 24/38 Linfeng_091811_SIN3A_10.raw High YFILPDSLPLDTLLVDVEPK 1 0 CID 88.00 5.73 1.00 1 2 1144.12952 2287.25176 1.96 54.87 6123 6123 MS2 23/38 Linfeng_091611_rIgG_10.raw High NREPVQLETLSIR IPI:IPI00302850.4 2 1 CID 54.47 4.68 1.00 1 3 518.95581 1554.85288 -4.52 31.57 3405 3405 MS2 26/48 Linfeng_091811_SIN3A_10.raw High NREPVQLETLSIR 2 0 CID 26.61 4.41 1.00 1 3 518.95734 1554.85746 -1.57 31.47 6596 6596 MS2 21/48 Linfeng_081211_IgG_10.raw High NREPVQLETLSIR 2 0 CID 81.50 4.40 1.00 1 2 777.93243 1554.85759 -1.49 31.54 6622 6622 MS2 18/24 Linfeng_081211_IgG_10.raw IPI:IPI00303099.2 280 31.3 9.86 Borealin 18.57 5 4 30.59 9.29 2 2 24.14 9.29 2 2 28.63 4.29 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EmNWLDYFALGGNK IPI:IPI00303099.2 1 1 CID M2(Oxidation) 63.09 4.70 1.00 1 2 837.38434 1673.76140 -0.89 46.85 5498 5498 MS2 15/26 Linfeng_091611_rIgG_7.raw High EVDNLYNIEILR IPI:IPI00303099.2 1 1 CID 65.02 4.28 1.00 1 2 745.89478 1490.78227 -1.82 40.25 4663 4663 MS2 17/22 Linfeng_091611_rIgG_7.raw High EVDNLYNIEILR 1 0 CID 63.84 4.28 1.00 1 2 745.89465 1490.78203 -1.99 40.57 4541 4541 MS2 16/22 Linfeng_091811_SIN3A_7.raw High IYNISGNGSPLADSK IPI:IPI00303099.2 1 1 CID 40.21 4.05 1.00 1 2 768.38782 1535.76836 -1.12 30.61 6260 6260 MS2 12/28 Linfeng_081211_IgG_7.raw High LTAEAIQTPLK IPI:IPI00303099.2 1 1 CID 34.33 3.90 1.00 1 2 592.84784 1184.68840 -0.14 30.47 6206 6206 MS2 15/20 Linfeng_081211_IgG_7.raw IPI:IPI00303476.1 529 56.5 5.40 "ATP synthase subunit beta, mitochondrial" 7.94 3 3 22.85 4.91 2 2 9.64 3.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DQEGQDVLLFIDNIFR IPI:IPI00303476.1 1 1 CID 61.42 5.62 1.00 1 3 641.32770 1921.96854 1.58 55.28 6618 6618 MS2 23/60 Linfeng_091611_rIgG_5.raw High VALTGLTVAEYFR IPI:IPI00303476.1 1 1 CID 62.42 4.77 1.00 1 2 720.39771 1439.78813 -0.85 42.91 9982 9982 MS2 20/24 Linfeng_081211_IgG_5.raw High TVLIMELINNVAK IPI:IPI00303476.1 2 1 CID 52.87 3.85 1.00 1 2 729.42548 1457.84368 2.73 49.96 11786 11786 MS2 15/24 Linfeng_081211_IgG_5.raw IPI:IPI00304232.1 423 47.7 5.90 Ribosome biogenesis protein WDR12 11.82 4 3 29.77 5.91 2 2 13.07 5.91 1 1 8.94 5.91 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YAVDDVPFSIPAASEIADLSNIINK 1 0 CID 79.95 6.61 1.00 1 3 888.12842 2662.37070 3.58 53.70 6588 6588 MS2 32/96 Linfeng_091811_SIN3A_5.raw High YAVDDVPFSIPAASEIADLSNIINK IPI:IPI00304232.1 1 1 CID 100.89 5.46 1.00 1 3 888.12549 2662.36191 0.28 53.49 6411 6411 MS2 25/96 Linfeng_091611_rIgG_5.raw High GAEEWILTGSYDK IPI:IPI00304232.1 1 1 CID 46.44 4.93 1.00 1 2 734.85095 1468.69463 -0.60 37.93 8586 8586 MS2 17/24 Linfeng_081211_IgG_5.raw High VFNcISYSPLcK IPI:IPI00304232.1 2 1 CID "C4(Carbamidomethyl), C11(Carbamidomethyl)" 61.14 4.35 1.00 1 2 744.35364 1487.70000 -1.47 34.51 7535 7535 MS2 16/22 Linfeng_081211_IgG_5.raw IPI:IPI00304885.2 943 106.8 9.39 Centromere protein C 1 8.70 5 5 44.06 2.86 2 2 13.91 2.23 1 1 41.18 3.61 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DINTEQGQNVLEILQDcFEEK IPI:IPI00942540.1 3 1 CID C17(Carbamidomethyl) 139.38 6.94 1.00 1 3 841.39520 2522.17105 -0.23 51.73 5616 5616 MS2 34/80 Linfeng_091611_rIgG_3.raw High TVLDTSYALIGETVNNYR IPI:IPI00966949.1 3 1 CID 77.76 5.30 1.00 1 3 677.01080 2029.01786 -2.89 45.15 5305 5305 MS2 31/68 Linfeng_091811_SIN3A_2.raw High HAATAPPHScPPDDTK IPI:IPI00966949.1 3 1 CID C10(Carbamidomethyl) 93.05 4.69 1.00 1 3 567.92419 1701.75803 -4.10 1.11 157 157 MS2 28/60 Linfeng_091811_SIN3A_2.raw High SEESPVYSNSSVR IPI:IPI00967987.1 2 1 CID 81.19 4.60 1.00 1 2 720.83337 1440.65947 -0.49 23.59 4174 4174 MS2 20/24 Linfeng_081211_IgG_3.raw High TISPAESTALLQGR IPI:IPI00967987.1 3 1 CID 69.20 4.23 1.00 1 2 722.39307 1443.77886 -0.97 33.34 7515 7515 MS2 16/26 Linfeng_081211_IgG_3.raw IPI:IPI00305068.5 941 106.9 8.25 Pre-mRNA-processing factor 6 2.87 2 2 64.24 2.87 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FELQHGTEEQQEEVR IPI:IPI00305068.5 2 1 CID 51.17 5.30 1.00 1 3 620.28949 1858.85392 -1.48 26.27 5081 5081 MS2 25/56 Linfeng_081211_IgG_3.raw High AAVELEEPEDAR IPI:IPI00305068.5 1 1 CID 65.16 4.33 1.00 1 2 664.81836 1328.62944 -2.63 27.66 5499 5499 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00328840.9 264 27.5 11.05 THO complex subunit 4 6.82 2 1 39.01 6.82 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QQLSAEELDAQLDAYNAR IPI:IPI00328840.9 1 1 CID 76.04 7.06 1.00 1 3 678.99469 2034.96952 -1.60 36.28 8254 8254 MS2 31/68 Linfeng_081211_IgG_7.raw High QQLSAEELDAQLDAYNAR IPI:IPI00328840.9 1 1 CID 100.87 6.10 1.00 1 2 1017.98792 2034.96855 -2.07 36.26 8244 8244 MS2 22/34 Linfeng_081211_IgG_7.raw IPI:IPI00375454.8 2446 271.5 5.41 Isoform 2 of Telomere-associated protein RIF1 6.26 15 9 91.26 1.06 2 2 77.46 1.84 5 3 88.59 5.15 8 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LVSDIIDPVALEIPLSK IPI:IPI00375454.8 5 1 CID 73.07 5.83 1.00 1 3 608.02197 1822.05136 -3.25 47.06 5575 5575 MS2 33/64 Linfeng_091811_SIN3A_1.raw High SLIDNFALNPDILcSAK IPI:IPI00375454.8 6 1 CID C14(Carbamidomethyl) 71.62 5.83 1.00 1 2 945.98291 1890.95854 -2.39 45.94 5433 5433 MS2 17/32 Linfeng_091811_SIN3A_1.raw High SGSFINSLLQLEELGFR IPI:IPI00375454.8 6 1 CID 89.20 5.58 1.00 1 2 955.50366 1910.00005 -0.97 53.51 6272 6272 MS2 24/32 Linfeng_091611_rIgG_1.raw High LVSDIIDPVALEIPLSK IPI:IPI00375454.8 5 1 CID 125.48 5.57 1.00 1 2 911.53107 1822.05486 -1.34 46.97 5564 5564 MS2 22/32 Linfeng_091811_SIN3A_1.raw High LIAEQTLQENLIEK IPI:IPI00375454.8 4 1 CID 61.84 5.23 1.00 1 2 821.45605 1641.90483 -0.62 43.64 7249 7249 MS2 19/26 Linfeng_081211_IgG_1.raw High TIGDLSTLTASEIK IPI:IPI00375454.8 5 1 CID 73.98 5.16 1.00 1 2 724.89392 1448.78057 -2.60 36.49 4221 4221 MS2 21/26 Linfeng_091811_SIN3A_1.raw High LIAEQTLQENLIEK IPI:IPI00375454.8 4 1 CID 80.80 5.12 1.00 1 2 821.45404 1641.90080 -3.07 35.39 4076 4076 MS2 21/26 Linfeng_091811_SIN3A_1.raw High mVSSIIDSLEILFNK IPI:IPI00375454.8 6 1 CID M1(Oxidation) 21.03 5.11 1.00 1 3 575.64404 1724.91758 2.08 54.34 6367 6367 MS2 27/56 Linfeng_091611_rIgG_1.raw High SGSFINSLLQLEELGFR IPI:IPI00375454.8 6 1 CID 77.59 5.02 1.00 1 3 637.33844 1910.00077 -0.59 53.52 6274 6274 MS2 35/64 Linfeng_091611_rIgG_1.raw High SGSFINSLLQLEELGFR IPI:IPI00375454.8 6 1 CID 55.35 4.96 1.00 1 3 637.33984 1910.00498 1.62 53.84 6363 6363 MS2 29/64 Linfeng_091811_SIN3A_2.raw High SNESVDIQDQEEK IPI:IPI00375454.8 4 1 CID 82.81 4.68 1.00 1 2 760.83752 1520.66777 -2.22 21.57 2208 2208 MS2 20/24 Linfeng_091811_SIN3A_1.raw High LNAQTEISEQTAAGELDGGNDVSDLHSSEETNTK IPI:IPI00375454.8 5 1 CID 45.10 4.68 1.00 1 4 890.90619 3560.60293 -2.22 32.31 3673 3673 MS2 33/198 Linfeng_091811_SIN3A_1.raw High SNESVDIQDQEEK IPI:IPI00375454.8 4 1 CID 70.42 4.64 1.00 1 2 760.83704 1520.66680 -2.86 21.59 2113 2113 MS2 20/24 Linfeng_091611_rIgG_2.raw High SNESVDIQDQEEK IPI:IPI00375454.8 4 1 CID 76.83 4.62 1.00 1 2 760.83746 1520.66765 -2.30 21.54 2117 2117 MS2 20/24 Linfeng_091611_rIgG_1.raw High SQEDEISSPVNK IPI:IPI00375454.8 5 1 CID 35.44 4.11 1.00 1 2 666.81793 1332.62859 0.58 24.18 4058 4058 MS2 15/22 Linfeng_081211_IgG_2.raw IPI:IPI00376503.2 316 33.3 6.80 "pyrroline-5-carboxylate reductase 1, mitochondrial isoform 2" 7.59 3 2 13.92 7.59 2 2 13.38 3.48 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGAQALLGAAK IPI:IPI00376503.2 3 1 CID 63.05 4.77 1.00 1 2 506.81042 1012.61357 -1.43 31.68 6640 6640 MS2 18/20 Linfeng_081211_IgG_7.raw High LGAQALLGAAK 3 0 CID 80.09 4.47 1.00 1 2 506.80954 1012.61180 -3.18 30.79 3447 3447 MS2 19/20 Linfeng_091611_rIgG_7.raw High SLLINAVEAScIR IPI:IPI00376503.2;IPI:IPI00747534.3 8 2 CID C11(Carbamidomethyl) 72.72 4.35 1.00 1 2 723.39227 1445.77727 -0.61 38.60 9015 9015 MS2 15/24 Linfeng_081211_IgG_7.raw IPI:IPI00382756.1 505 56.3 9.17 Isoform 2 of Pleiotropic regulator 1 7.13 2 2 21.92 7.13 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cQAAEPQIITGSHDTTIR IPI:IPI00382756.1 4 1 CID C1(Carbamidomethyl) 43.47 4.44 1.00 1 3 666.66022 1997.96610 -2.45 27.58 5093 5093 MS2 22/68 Linfeng_081211_IgG_5.raw High cIAVEPGNQWFVTGSADR IPI:IPI00382756.1 3 1 CID C1(Carbamidomethyl) 63.25 4.32 1.00 1 2 1003.97186 2006.93645 -1.26 37.80 8550 8550 MS2 15/34 Linfeng_081211_IgG_5.raw IPI:IPI00384556.1 654 75.9 8.70 Ribosomal RNA upstream binding transcription factor (Fragment) 5.81 5 3 89.50 1.83 2 1 48.96 5.81 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLESLPEEEQQR IPI:IPI00384556.1 3 1 CID 33.87 4.93 1.00 1 3 502.24612 1504.72382 -2.70 30.87 3495 3495 MS2 26/44 Linfeng_091811_SIN3A_3.raw High HPELNISEEGITK IPI:IPI00384556.1 3 1 CID 40.70 4.47 1.00 1 3 489.58609 1466.74372 -3.34 27.69 3063 3063 MS2 25/48 Linfeng_091811_SIN3A_3.raw High FREDHPDLIQNAK IPI:IPI00384556.1 3 1 CID 68.73 4.40 1.00 1 3 528.26819 1582.79001 -4.61 23.38 2461 2461 MS2 26/48 Linfeng_091811_SIN3A_3.raw High FLESLPEEEQQR 3 0 CID 40.01 4.19 1.00 1 3 502.24631 1504.72437 -2.33 32.21 7082 7082 MS2 26/44 Linfeng_081211_IgG_3.raw High FLESLPEEEQQR 3 0 CID 19.60 3.50 1.00 1 2 752.86517 1504.72307 -3.20 32.13 7052 7052 MS2 19/22 Linfeng_081211_IgG_3.raw IPI:IPI00385785.1 216 25.0 4.51 "cDNA FLJ35172 fis, clone PLACE6013232" 9.72 2 2 18.02 9.72 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VQENSAYIcSR IPI:IPI00385785.1 2 1 CID C9(Carbamidomethyl) 76.22 4.03 1.00 1 2 663.80890 1326.61052 -0.15 23.60 4177 4177 MS2 16/20 Linfeng_081211_IgG_3.raw High LEDLNFPEIK IPI:IPI00385785.1 4 1 CID 16.60 3.51 1.00 1 2 609.32379 1217.64031 -0.81 38.42 9329 9329 MS2 13/18 Linfeng_081211_IgG_3.raw IPI:IPI00395674.1 231 23.6 10.90 Isoform SM-B of Small nuclear ribonucleoprotein-associated proteins B and B' 6.06 2 1 30.04 6.06 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VPLAGAAGGPGIGR IPI:IPI00395674.1 5 1 CID 76.53 4.38 1.00 1 2 596.84259 1192.67790 -1.57 27.43 5403 5403 MS2 19/26 Linfeng_081211_IgG_8.raw High VPLAGAAGGPGIGR IPI:IPI00395674.1 5 1 CID 49.37 3.84 1.00 1 2 596.84241 1192.67754 -1.87 28.01 5356 5356 MS2 18/26 Linfeng_081211_IgG_7.raw IPI:IPI00410714.5 142 15.2 8.68 Hemoglobin subunit alpha 10.56 2 1 22.45 10.56 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGAHAGEYGAEALER IPI:IPI00410714.5 1 1 CID 40.51 4.91 1.00 1 3 510.58255 1529.73310 -0.83 25.11 4526 4526 MS2 25/56 Linfeng_081211_IgG_4.raw High VGAHAGEYGAEALER IPI:IPI00410714.5 1 1 CID 16.36 4.38 1.00 1 3 510.58197 1529.73136 -1.97 24.93 4594 4594 MS2 21/56 Linfeng_081211_IgG_10.raw IPI:IPI00414963.2 296 31.5 4.96 Isoform 2 of Polyadenylate-binding protein 2 3.72 2 1 19.37 3.72 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TSLALDESLFR IPI:IPI00414963.2 2 1 CID 65.94 4.35 1.00 1 2 626.33197 1251.65666 -1.07 38.89 8876 8876 MS2 17/20 Linfeng_081211_IgG_5.raw High TSLALDESLFR IPI:IPI00414963.2 2 1 CID 68.41 4.02 1.00 1 2 626.33228 1251.65727 -0.58 38.87 9223 9223 MS2 16/20 Linfeng_081211_IgG_8.raw IPI:IPI00456004.5 1453 164.2 6.92 Isoform 2 of ATPase family AAA domain-containing protein 2B 3.65 3 3 52.09 1.79 2 2 51.98 1.86 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SPGPGPGPGAGAEPGATGGSSHFISSR IPI:IPI00953211.1 3 1 CID 102.51 5.81 1.00 1 3 798.04517 2392.12094 -2.85 25.66 2685 2685 MS2 29/104 Linfeng_091611_rIgG_2.raw High AGGSGGAGVTLDEAR IPI:IPI00456004.5 3 1 CID 53.28 4.14 1.00 1 2 659.32269 1317.63811 -1.00 25.21 4355 4355 MS2 20/28 Linfeng_081211_IgG_2.raw High SNNLAVDQLER IPI:IPI00456004.5 2 1 CID 47.56 4.05 1.00 1 2 629.82239 1258.63750 -0.92 29.98 5732 5732 MS2 16/20 Linfeng_081211_IgG_2.raw IPI:IPI00465363.3 127 14.2 10.32 Histone H2B type 1-A 19.69 3 2 188.13 19.69 2 2 62.17 11.81 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AMSIMNSFVTDIFER 1 0 CID 49.58 4.69 1.00 1 2 880.92120 1760.83513 0.24 51.19 5706 5706 MS2 15/28 Linfeng_091611_rIgG_10.raw High KESYSIYIYK IPI:IPI00465363.3 1 1 CID 31.02 4.01 1.00 1 2 647.33948 1293.67168 -0.67 29.39 5909 5909 MS2 14/18 Linfeng_081211_IgG_10.raw High AmSImNSFVTDIFER IPI:IPI00465363.3 1 1 CID "M2(Oxidation), M5(Oxidation)" 44.96 3.70 1.00 1 2 896.91840 1792.82952 2.78 42.83 10319 10319 MS2 18/28 Linfeng_081211_IgG_10.raw IPI:IPI00477803.4 799 90.0 5.64 Putative uncharacterized protein DKFZp781L0540 (Fragment) 3.38 2 2 75.49 3.38 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LAQQQAALLmQQEER IPI:IPI00477803.4 2 1 CID M10(Oxidation) 81.41 4.71 1.00 1 2 886.95068 1772.89409 -1.10 29.41 5540 5540 MS2 18/28 Linfeng_081211_IgG_2.raw High VGEPVALSEEER IPI:IPI00477803.4 2 1 CID 86.16 4.25 1.00 1 2 657.82831 1314.64934 -3.29 28.29 5266 5266 MS2 19/22 Linfeng_081211_IgG_2.raw IPI:IPI00514078.1 1315 145.2 7.18 Isoform 5 of Pogo transposable element with ZNF domain 2.05 2 2 26.02 2.05 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FQASQGENLEGK IPI:IPI00514078.1 5 1 CID 48.32 3.53 1.00 1 2 654.31464 1307.62200 -0.52 23.93 3967 3967 MS2 18/22 Linfeng_081211_IgG_2.raw High VPEPNENVGDAVQTK IPI:IPI00514078.1 5 1 CID 81.49 3.46 1.00 1 2 798.89728 1596.78728 0.51 26.30 4702 4702 MS2 16/28 Linfeng_081211_IgG_2.raw IPI:IPI00550766.1 461 52.8 9.33 Ribosomal RNA processing protein 1 homolog A 5.42 3 2 38.80 2.82 2 1 30.33 2.60 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGAEELTADQNLK IPI:IPI00909754.1 2 1 CID 42.85 5.19 1.00 1 2 694.35516 1387.70305 -2.43 27.79 5145 5145 MS2 18/24 Linfeng_081211_IgG_5.raw High AEAGEQPGTAER IPI:IPI00550766.1 1 1 CID 72.06 4.19 1.00 1 2 608.28131 1215.55535 -3.90 13.64 1235 1235 MS2 19/22 Linfeng_091811_SIN3A_5.raw High VGAEELTADQNLK IPI:IPI00909754.1 2 1 CID 38.84 4.13 1.00 1 2 694.35541 1387.70354 -2.08 27.55 5304 5304 MS2 16/24 Linfeng_081211_IgG_6.raw IPI:IPI00552736.1 285 33.0 5.17 Isoform 3 of Pre-mRNA-splicing factor ISY1 homolog 9.47 3 2 11.99 9.47 2 2 12.28 4.91 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YASETLQAQSEEAR 4 0 CID 81.40 5.06 1.00 1 2 791.86853 1582.72978 -2.92 23.08 2440 2440 MS2 18/26 Linfeng_091811_SIN3A_6.raw High YASETLQAQSEEAR IPI:IPI00552736.1 4 1 CID 82.98 4.42 1.00 1 2 791.87018 1582.73308 -0.84 23.28 4108 4108 MS2 16/26 Linfeng_081211_IgG_6.raw High VAQIQNAGLGEFR IPI:IPI00552736.1 5 1 CID 75.82 4.06 1.00 1 2 701.87463 1402.74199 -1.30 32.29 6876 6876 MS2 17/24 Linfeng_081211_IgG_6.raw IPI:IPI00642935.1 884 99.9 9.22 "cDNA FLJ51519, highly similar to Homo sapiens calcium homeostasis endoplasmic reticulum protein (CHERP), mRNA" 2.83 2 2 32.52 2.83 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVGVALDDPYENYR IPI:IPI00642935.1 2 1 CID 85.39 3.81 1.00 1 2 784.37421 1567.74114 1.51 34.53 7967 7967 MS2 14/26 Linfeng_081211_IgG_3.raw High LALEQQQLIcK IPI:IPI00642935.1 3 1 CID C10(Carbamidomethyl) 58.24 3.67 1.00 1 2 672.37170 1343.73613 0.69 31.97 6996 6996 MS2 15/20 Linfeng_081211_IgG_3.raw IPI:IPI00643601.1 841 93.8 8.84 94 kDa protein 3.33 2 2 74.14 3.33 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATTGTQTLLSSGTR IPI:IPI00643601.1 6 1 CID 63.69 4.14 1.00 1 2 697.36615 1393.72502 -2.28 27.46 5054 5054 MS2 14/26 Linfeng_081211_IgG_2.raw High ALNIVDQEGSLLGK IPI:IPI00643601.1 5 1 CID 36.03 3.96 1.00 1 2 728.90527 1456.80327 1.79 38.17 8094 8094 MS2 15/26 Linfeng_081211_IgG_2.raw IPI:IPI00645187.1 123 13.9 4.32 14 kDa protein 26.83 3 2 16.09 26.83 2 2 7.47 12.20 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DKPVTGEQIEVFANK 2 0 CID 82.09 5.72 1.00 1 3 558.95966 1674.86441 -3.22 30.30 3418 3418 MS2 28/56 Linfeng_091811_SIN3A_3.raw High SGLSDLAESLTNDNETNS IPI:IPI00645187.1 2 1 CID 75.05 5.49 1.00 1 2 933.91541 1866.82353 1.89 42.25 10620 10620 MS2 15/34 Linfeng_081211_IgG_3.raw High DKPVTGEQIEVFANK IPI:IPI00645187.1 2 1 CID 53.48 5.33 1.00 1 3 558.96088 1674.86808 -1.04 31.87 6957 6957 MS2 27/56 Linfeng_081211_IgG_3.raw IPI:IPI00645384.3 172 20.9 10.48 FUS interacting protein (Serine/arginine-rich) 1 15.70 2 2 17.33 15.70 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YGPIVDVYVPLDFYTR IPI:IPI00645384.3 7 1 CID 86.41 5.05 1.00 1 2 958.99152 1916.97576 -1.87 48.47 11659 11659 MS2 18/30 Linfeng_081211_IgG_8.raw High GFAYVQFEDVR IPI:IPI00645384.3 7 1 CID 59.21 3.93 1.00 1 2 665.82391 1330.64055 -1.60 36.95 8619 8619 MS2 15/20 Linfeng_081211_IgG_8.raw IPI:IPI00647528.1 263 29.4 7.15 "Exosome component 2, isoform CRA_b" 11.03 2 2 14.44 11.03 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EEEAGGFIANLEPVSLADR IPI:IPI00647528.1 4 1 CID 27.07 3.57 1.00 1 2 1008.99884 2016.99040 1.49 42.23 10224 10224 MS2 14/36 Linfeng_081211_IgG_7.raw High NcIISLVTQR IPI:IPI00647528.1 4 1 CID C2(Carbamidomethyl) 51.25 3.55 1.00 1 2 602.32776 1203.64824 -2.68 36.17 8215 8215 MS2 15/18 Linfeng_081211_IgG_7.raw IPI:IPI00747534.3 319 33.7 6.02 Pyrroline-5-carboxylate reductase 13.79 3 3 10.33 8.78 2 2 11.81 5.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LESPTVSTLTPSSPGK IPI:IPI00335061.6 3 1 CID 76.27 4.49 1.00 1 2 800.92365 1600.84001 -1.81 29.10 3217 3217 MS2 20/30 Linfeng_091611_rIgG_7.raw High SLLINAVEAScIR IPI:IPI00376503.2;IPI:IPI00747534.3 8 2 CID C11(Carbamidomethyl) 72.72 4.35 1.00 1 2 723.39227 1445.77727 -0.61 38.60 9015 9015 MS2 15/24 Linfeng_081211_IgG_7.raw High LAIQLGAQALLGAAK IPI:IPI00747534.3 4 1 CID 31.49 4.05 1.00 1 2 719.44476 1437.88225 2.36 41.81 10091 10091 MS2 18/28 Linfeng_081211_IgG_7.raw IPI:IPI00749024.2 356 40.5 9.00 nuclear RNA export factor 1 isoform 2 7.58 2 2 16.47 7.58 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SDPDLVAQNIDVVLNR IPI:IPI00749024.2 2 1 CID 42.80 4.21 1.00 1 2 884.46539 1767.92351 -0.07 41.10 9593 9593 MS2 18/30 Linfeng_081211_IgG_4.raw High YDGSQQALDLK IPI:IPI00749024.2 2 1 CID 70.92 3.50 1.00 1 2 619.30554 1237.60381 -1.73 27.29 5186 5186 MS2 16/20 Linfeng_081211_IgG_4.raw IPI:IPI00759742.2 1878 208.3 6.60 Isoform 1 of Bromodomain adjacent to zinc finger domain protein 2A 2.18 3 3 67.70 1.17 2 2 35.66 1.01 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DTPEGLQWVQLSAEEIPSR IPI:IPI00759742.2 3 1 CID 67.16 5.59 1.00 1 3 719.02576 2155.06272 -1.84 44.31 5229 5229 MS2 27/72 Linfeng_091811_SIN3A_1.raw High GEcQTTIQGQAR IPI:IPI00759742.2 3 1 CID C3(Carbamidomethyl) 48.16 4.03 1.00 1 2 674.81818 1348.62908 1.21 19.71 2635 2635 MS2 15/22 Linfeng_081211_IgG_2.raw High LAALEQNVER IPI:IPI00759742.2 3 1 CID 30.50 3.91 1.00 1 2 571.81073 1142.61418 -2.00 26.83 5257 5257 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00783271.1 1394 157.8 6.13 "Leucine-rich PPR motif-containing protein, mitochondrial" 1.58 2 2 39.61 1.58 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VIEEQLEPAVEK IPI:IPI00783271.1 1 1 CID 27.20 3.82 1.00 1 2 692.37347 1383.73967 2.18 29.68 5627 5627 MS2 14/22 Linfeng_081211_IgG_2.raw High mEEANIQPNR IPI:IPI00783271.1 4 1 CID M1(Oxidation) 36.75 3.67 1.00 1 2 609.28308 1217.55889 0.75 20.14 2778 2778 MS2 14/18 Linfeng_081211_IgG_2.raw IPI:IPI00790725.2 222 24.3 9.69 "cDNA FLJ60792, highly similar to Probable ribosome biogenesis protein NEP1" 11.26 2 2 17.10 11.26 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGTSFSIPVVSDVR IPI:IPI00790725.2 3 1 CID 54.70 4.16 1.00 1 2 731.89813 1462.78899 -0.75 38.47 9096 9096 MS2 14/26 Linfeng_081211_IgG_8.raw High NVLIEVNPQTR IPI:IPI00790725.2 3 1 CID 48.90 3.83 1.00 1 2 641.85852 1282.70976 -1.30 30.35 6391 6391 MS2 15/20 Linfeng_081211_IgG_8.raw IPI:IPI00793442.1 205 22.7 9.38 Putative uncharacterized protein PHB 9.76 2 2 18.05 9.76 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FDAGELITQR IPI:IPI00793442.1 5 1 CID 44.10 3.75 1.00 1 2 575.29883 1149.59038 0.40 34.17 7534 7534 MS2 17/18 Linfeng_081211_IgG_7.raw High DLQNVNITLR IPI:IPI00793442.1 7 1 CID 45.63 3.53 1.00 1 2 593.33276 1185.65825 -0.35 33.71 7364 7364 MS2 15/18 Linfeng_081211_IgG_7.raw IPI:IPI00847774.2 154 18.1 10.48 "cDNA FLJ51501, highly similar to 60S ribosomal protein L18a" 8.44 2 1 17.27 8.44 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLTTAGAVTQcYR IPI:IPI00847774.2 3 1 CID C11(Carbamidomethyl) 80.83 4.13 1.00 1 2 728.34729 1455.68730 -1.65 29.01 5905 5905 MS2 15/24 Linfeng_081211_IgG_8.raw High DLTTAGAVTQcYR IPI:IPI00847774.2 3 1 CID C11(Carbamidomethyl) 55.78 3.59 1.00 1 2 728.34784 1455.68840 -0.90 29.23 5854 5854 MS2 15/24 Linfeng_081211_IgG_10.raw IPI:IPI00854683.1 449 51.4 5.20 "cDNA FLJ45250 fis, clone BRHIP2008756, highly similar to Pescadillo homolog 1" 5.35 2 2 56.57 5.35 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLcIGATYDVTDSR IPI:IPI00854683.1 4 1 CID C3(Carbamidomethyl) 62.40 3.65 1.00 1 2 779.36530 1557.72331 1.23 32.55 6912 6912 MS2 19/26 Linfeng_081211_IgG_4.raw High LAALSASLAR IPI:IPI00854683.1 4 1 CID 38.24 3.60 1.00 1 2 486.79544 972.58360 -0.11 30.17 6109 6109 MS2 17/18 Linfeng_081211_IgG_4.raw IPI:IPI00856055.1 1224 136.2 8.13 Isoform 3 of Zinc finger MYM-type protein 4 2.04 2 2 22.24 2.04 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SNAVQEADSELK IPI:IPI00856055.1 4 1 CID 59.06 3.66 1.00 1 2 645.81195 1290.61662 -0.49 27.77 5155 5155 MS2 15/22 Linfeng_081211_IgG_2.raw High IIGDASTQTDALK IPI:IPI00856055.1 4 1 CID 44.27 3.48 1.00 1 2 666.85437 1332.70146 0.65 27.78 5161 5161 MS2 16/24 Linfeng_081211_IgG_2.raw IPI:IPI00873948.3 1099 125.1 8.29 DNA-directed RNA polymerase 2.46 2 2 86.83 2.46 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VSGDDVIIGK IPI:IPI00873948.3 4 1 CID 20.29 3.73 1.00 1 2 501.77744 1002.54759 0.93 27.63 5113 5113 MS2 14/18 Linfeng_081211_IgG_2.raw High GEIGDATPFNDAVNVQK IPI:IPI00873948.3 4 1 CID 63.65 3.71 1.00 1 2 887.93402 1774.86077 0.03 34.14 6950 6950 MS2 17/32 Linfeng_081211_IgG_2.raw IPI:IPI00877787.1 272 31.2 9.96 Putative uncharacterized protein RPL3 8.82 2 2 24.61 8.82 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVFAEHISDEcK IPI:IPI00877787.1 7 1 CID C11(Carbamidomethyl) 72.51 4.69 1.00 1 2 718.32874 1435.65019 -1.44 25.82 4546 4546 MS2 18/22 Linfeng_081211_IgG_5.raw High NNASTDYDLSDK IPI:IPI00877787.1 4 1 CID 64.91 4.34 1.00 1 2 671.79083 1342.57439 -1.03 23.62 3923 3923 MS2 15/22 Linfeng_081211_IgG_5.raw IPI:IPI00878392.1 95 11.2 6.80 11 kDa protein 29.47 4 2 19.54 29.47 2 2 13.74 29.47 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YFQINQDEEEEEDED 2 0 CID 94.52 4.27 1.00 1 2 966.36505 1931.72283 -3.81 32.73 3560 3560 MS2 21/28 Linfeng_091811_SIN3A_10.raw High AGNLGGGVVTIER 3 0 CID 33.02 4.25 1.00 1 2 621.84143 1242.67558 -3.67 29.00 3055 3055 MS2 18/24 Linfeng_091811_SIN3A_10.raw High AGNLGGGVVTIER IPI:IPI00878392.1 3 1 CID 40.33 3.96 1.00 1 2 621.84296 1242.67864 -1.22 29.14 5824 5824 MS2 17/24 Linfeng_081211_IgG_10.raw High YFQINQDEEEEEDED IPI:IPI00878392.1 2 1 CID 85.56 3.93 1.00 1 2 966.36676 1931.72624 -2.04 32.73 6960 6960 MS2 20/28 Linfeng_081211_IgG_10.raw IPI:IPI00878876.1 120 13.3 8.91 "cDNA FLJ51872, highly similar to Small nuclear ribonucleoprotein Sm D3" 42.50 5 3 22.30 25.83 2 2 22.43 16.67 1 1 24.00 17.50 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLHEAEGHIVTcETNTGEVYR 4 0 CID C12(Carbamidomethyl) 108.68 6.49 1.00 1 3 805.38196 2414.13132 -3.84 25.49 2579 2579 MS2 31/80 Linfeng_091811_SIN3A_10.raw High VLHEAEGHIVTcETNTGEVYR IPI:IPI00878876.1 4 1 CID C12(Carbamidomethyl) 48.36 4.86 1.00 1 4 604.28870 2414.13296 -3.16 25.78 4842 4842 MS2 29/120 Linfeng_081211_IgG_10.raw High LIEAEDNmNcQmSNITVTYR IPI:IPI00879063.1 4 1 CID "M8(Oxidation), C10(Carbamidomethyl), M12(Oxidation)" 89.74 4.82 1.00 1 3 812.02698 2434.06638 -0.84 29.87 3026 3026 MS2 29/76 Linfeng_091611_rIgG_10.raw High VLHEAEGHIVTcETNTGEVYR 4 0 CID C12(Carbamidomethyl) 37.42 4.63 1.00 1 4 604.28833 2414.13149 -3.77 25.41 2567 2567 MS2 34/120 Linfeng_091811_SIN3A_10.raw High VAQLEQVYIR IPI:IPI00878876.1 3 1 CID 53.03 3.94 1.00 1 2 609.84515 1218.68303 -0.91 31.39 6564 6564 MS2 15/18 Linfeng_081211_IgG_10.raw IPI:IPI00879747.1 275 31.1 7.96 ER lipid raft associated 1 8.73 2 2 23.83 8.73 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISEIEDAAFLAR IPI:IPI00879747.1 4 1 CID 76.60 5.18 1.00 1 2 667.85059 1334.69390 -0.93 36.59 8352 8352 MS2 20/22 Linfeng_081211_IgG_6.raw High SVQTTLQTDEVK IPI:IPI00879747.1 7 1 CID 60.39 3.86 1.00 1 2 674.85071 1348.69414 -1.01 25.48 4744 4744 MS2 18/22 Linfeng_081211_IgG_6.raw IPI:IPI00884938.1 115 13.1 6.29 Isoform 1 of DNA-directed RNA polymerase II subunit RPB11-b1 18.26 2 2 9.08 18.26 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VPNAcLFTINK IPI:IPI00884938.1 11 1 CID C5(Carbamidomethyl) 52.02 3.80 1.00 1 2 638.83868 1276.67009 -1.40 33.93 7403 7403 MS2 14/20 Linfeng_081211_IgG_10.raw High DPQVLFAGYK IPI:IPI00884938.1 11 1 CID 56.74 3.63 1.00 1 2 569.30035 1137.59343 -0.44 34.97 7760 7760 MS2 15/18 Linfeng_081211_IgG_10.raw IPI:IPI00888683.3 625 69.2 8.81 "similar to plakophilin 1, partial" 4.16 2 2 30.76 4.16 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SPNQNVQQAAAGALR IPI:IPI00888683.3 3 1 CID 82.65 4.99 1.00 1 2 762.89569 1524.78411 -2.42 27.25 5210 5210 MS2 20/28 Linfeng_081211_IgG_6.raw High AVQYLSSQDEK IPI:IPI00888683.3 3 1 CID 51.21 3.70 1.00 1 2 634.31036 1267.61345 -2.41 23.26 4102 4102 MS2 15/20 Linfeng_081211_IgG_6.raw IPI:IPI00909797.1 634 72.1 9.67 "cDNA FLJ50575, highly similar to U4/U6 small nuclear ribonucleoprotein Prp3" 3.79 2 2 21.60 3.79 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLGTEAVQDPTK IPI:IPI00909797.1 3 1 CID 52.68 4.06 1.00 1 2 629.33673 1257.66619 -1.90 26.14 5038 5038 MS2 15/22 Linfeng_081211_IgG_3.raw High DVNVVVVEGGPK IPI:IPI00909797.1 2 1 CID 48.02 3.91 1.00 1 2 606.33423 1211.66118 -1.59 30.62 6509 6509 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00910673.1 385 44.1 9.82 "cDNA FLJ51176, highly similar to Zinc finger protein 512" 7.53 2 2 32.11 7.53 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IQcPNQGcEAVYSSVSGLK IPI:IPI00910673.1 3 1 CID "C3(Carbamidomethyl), C8(Carbamidomethyl)" 4.36 4.33 1.00 1 3 699.66345 2096.97580 0.85 32.23 6801 6801 MS2 22/72 Linfeng_081211_IgG_4.raw High VLQDLVPDDR IPI:IPI00910673.1 3 1 CID 44.27 3.67 1.00 1 2 585.31036 1169.61345 -2.30 31.73 6643 6643 MS2 14/18 Linfeng_081211_IgG_4.raw IPI:IPI00910737.1 762 86.0 6.14 "cDNA FLJ54022, highly similar to Exportin-2" 3.41 2 2 78.59 3.41 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AADEEAFEDNSEEYIR IPI:IPI00910737.1 3 1 CID 106.19 4.80 1.00 1 2 944.39563 1887.78398 -2.12 32.86 7339 7339 MS2 18/30 Linfeng_081211_IgG_3.raw High DLEGSDIDTR IPI:IPI00910737.1 3 1 CID 39.22 3.66 1.00 1 2 560.75818 1120.50908 -2.37 25.48 4814 4814 MS2 14/18 Linfeng_081211_IgG_3.raw IPI:IPI00910934.2 472 51.5 8.27 Isoform 5 of Putative oxidoreductase GLYR1 12.50 5 4 16.08 5.51 2 2 17.29 4.03 1 1 19.67 5.72 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FQQAVDAVEEFLR IPI:IPI00910934.2 5 1 CID 69.82 4.99 1.00 1 2 776.39331 1551.77934 -0.59 44.34 10371 10371 MS2 21/24 Linfeng_081211_IgG_5.raw High IGFLGLGLmGSGIVSNLLK IPI:IPI00910934.2 5 1 CID M9(Oxidation) 49.43 4.88 1.00 1 3 635.69995 1905.08530 -1.36 51.71 6242 6242 MS2 31/72 Linfeng_091611_rIgG_4.raw High TSFFLGEVGNAAK IPI:IPI00910934.2 5 1 CID 87.52 4.73 1.00 1 2 670.84375 1340.68022 -3.24 36.72 4280 4280 MS2 19/24 Linfeng_091811_SIN3A_4.raw High ALDQSDNDmSAVYR IPI:IPI00910934.2 5 1 CID M9(Oxidation) 109.10 4.71 1.00 1 2 800.84711 1600.68694 -2.44 23.50 2509 2509 MS2 21/26 Linfeng_091811_SIN3A_4.raw High TSFFLGEVGNAAK IPI:IPI00910934.2 5 1 CID 27.50 4.48 1.00 1 2 670.84692 1340.68657 1.50 37.17 8537 8537 MS2 14/24 Linfeng_081211_IgG_6.raw IPI:IPI00911038.2 1301 147.3 6.73 apoptotic chromatin condensation inducer in the nucleus isoform 3 8.46 8 6 127.33 1.92 2 2 129.21 4.77 4 3 114.79 3.15 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AAPcIYWLPLTDSQIVQK IPI:IPI00911038.2 5 1 CID C4(Carbamidomethyl) 62.81 6.43 1.00 1 3 701.70221 2103.09208 -1.11 44.98 5183 5183 MS2 28/68 Linfeng_091611_rIgG_2.raw High AAPcIYWLPLTDSQIVQK IPI:IPI00911038.2 5 1 CID C4(Carbamidomethyl) 49.64 6.05 1.00 1 3 701.70148 2103.08988 -2.15 45.17 5308 5308 MS2 28/68 Linfeng_091811_SIN3A_2.raw High ASLVALPEQTASEEETPPPLLTK IPI:IPI00911038.2 3 1 CID 51.59 5.72 1.00 1 3 807.76038 2421.26657 -3.91 38.85 4498 4498 MS2 24/88 Linfeng_091811_SIN3A_2.raw High LSEGSQPAEEEEDQETPSR IPI:IPI00911038.2 3 1 CID 123.35 5.69 1.00 1 2 1059.45667 2117.90605 -2.17 21.47 2096 2096 MS2 25/36 Linfeng_091611_rIgG_2.raw High HSTPHAAFQPNSQIGEEmSQNSFIK IPI:IPI00911038.2 3 1 CID M18(Oxidation) 52.81 5.51 1.00 1 4 701.07715 2801.28676 -2.90 28.28 3035 3035 MS2 37/144 Linfeng_091611_rIgG_2.raw High LSEGSQPAEEEEDQETPSR IPI:IPI00911038.2 3 1 CID 44.39 5.07 1.00 1 3 706.64050 2117.90696 -1.74 21.46 2094 2094 MS2 30/72 Linfeng_091611_rIgG_2.raw High TGTLVEEAFWIDK IPI:IPI00297991.2 5 1 CID 42.29 4.58 1.00 1 2 754.88586 1508.76445 0.82 49.99 9040 9040 MS2 14/24 Linfeng_081211_IgG_1.raw High SGVSITIDDPVR IPI:IPI00297991.2 5 1 CID 32.06 3.96 1.00 1 2 629.83429 1258.66130 -2.00 33.70 7650 7650 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00926449.1 111 12.4 8.59 Protein 11.71 2 1 7.87 11.71 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High xIDDSDSNLSVVK IPI:IPI00926449.1 1 1 CID X1(L) 22.31 3.97 0.00 1 2 702.86365 1404.72002 -1.22 30.31 6392 6392 MS2 19/24 Linfeng_081211_IgG_3.raw High xIDDSDSNLSVVK IPI:IPI00926449.1 1 1 CID X1(L) 19.84 3.89 0.00 1 2 702.86487 1404.72246 0.52 30.47 5879 5879 MS2 14/24 Linfeng_081211_IgG_2.raw IPI:IPI00929259.1 221 25.3 7.71 "cDNA FLJ10831 fis, clone NT2RP4001148, highly similar to Homo sapiens WD repeats and SOF1 domain containing (WDSOF1), mRNA" 12.22 2 2 15.77 12.22 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LATVLSGAcDGEVR IPI:IPI00929259.1 2 1 CID C9(Carbamidomethyl) 86.42 4.20 1.00 1 2 724.36292 1447.71855 -1.71 30.12 5985 5985 MS2 20/26 Linfeng_081211_IgG_5.raw High FcGTSFFTVGDDK IPI:IPI00929259.1 2 1 CID C2(Carbamidomethyl) 76.21 3.57 1.00 1 2 740.82562 1480.64397 1.75 37.87 8566 8566 MS2 15/24 Linfeng_081211_IgG_5.raw IPI:IPI00940685.1 357 39.3 8.10 U5 small nuclear ribonucleoprotein 40 kDa protein 11.20 4 3 20.95 7.56 2 2 28.26 7.84 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GPQLVcTGSDDGTVK IPI:IPI00940685.1 2 1 CID C6(Carbamidomethyl) 71.89 4.52 1.00 1 2 767.36127 1533.71526 -4.02 24.81 2682 2682 MS2 21/28 Linfeng_091811_SIN3A_6.raw High GHTSFVNScYPAR IPI:IPI00940685.1 2 1 CID C9(Carbamidomethyl) 19.04 4.42 1.00 1 3 499.22791 1495.66916 -3.71 23.40 2486 2486 MS2 20/48 Linfeng_091811_SIN3A_6.raw High GPQLVcTGSDDGTVK IPI:IPI00940685.1 2 1 CID C6(Carbamidomethyl) 24.21 3.94 1.00 1 2 767.36267 1533.71807 -2.19 25.17 4641 4641 MS2 19/28 Linfeng_081211_IgG_6.raw High TVAVWDSETGER IPI:IPI00940685.1 2 1 CID 64.54 3.65 1.00 1 2 675.31915 1349.63103 -1.65 29.33 5887 5887 MS2 16/22 Linfeng_081211_IgG_6.raw IPI:IPI00940901.1 1197 132.6 8.68 Isoform 2 of RRP12-like protein 5.01 4 3 53.14 3.09 2 2 39.04 3.09 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALSQAAVEEEEEEEEEEEPAQGK IPI:IPI00940901.1 3 1 CID 89.12 6.63 1.00 1 3 854.04089 2560.10813 0.90 29.87 5696 5696 MS2 30/88 Linfeng_081211_IgG_2.raw High NFLPILFNLYGQPVAAGDTPAPR IPI:IPI00940901.1 3 1 CID 106.36 6.29 1.00 1 3 824.44110 2471.30875 0.19 50.20 5833 5833 MS2 32/88 Linfeng_091611_rIgG_2.raw High AmDLAQAGSTVESK IPI:IPI00940901.1 3 1 CID M2(Oxidation) 43.19 4.89 1.00 1 2 712.33893 1423.67058 -1.99 24.60 4155 4155 MS2 18/26 Linfeng_081211_IgG_2.raw High AmDLAQAGSTVESK IPI:IPI00940901.1 3 1 CID M2(Oxidation) 71.31 4.80 1.00 1 2 712.33807 1423.66887 -3.19 22.64 2260 2260 MS2 22/26 Linfeng_091611_rIgG_2.raw IPI:IPI00943825.1 329 35.3 10.07 Truncated methyl CpG binding protein 2 transcript 1 10.33 2 2 41.14 10.33 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGDTSLDPNDFDFTVTGR IPI:IPI00943825.1 3 1 CID 80.91 4.69 1.00 1 2 978.45416 1955.90105 1.45 39.62 9144 9144 MS2 19/34 Linfeng_081211_IgG_4.raw High AEGGGATTSTQVmVIK IPI:IPI00943825.1 3 1 CID M13(Oxidation) 45.94 4.34 1.00 1 2 783.39581 1565.78435 0.20 24.61 4368 4368 MS2 15/30 Linfeng_081211_IgG_4.raw IPI:IPI00945774.1 86 9.5 9.88 Protein 36.05 2 2 17.16 36.05 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LASLFSSLEPQIQPVYVPVPK IPI:IPI00945774.1 6 1 CID 55.94 4.57 1.00 1 3 771.43457 2312.28916 -0.43 46.74 11014 11014 MS2 21/80 Linfeng_081211_IgG_5.raw High LGQVASSLFR IPI:IPI00945774.1 6 1 CID 42.82 3.75 1.00 1 2 539.30536 1077.60344 -1.61 33.83 7302 7302 MS2 16/18 Linfeng_081211_IgG_5.raw IPI:IPI00000686.2 960 107.3 6.51 Probable RNA-binding protein 19 4.38 3 3 42.67 4.38 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ILGENEEEEDLAESGR IPI:IPI00000686.2 1 1 CID 106.49 4.87 1.00 1 2 895.40649 1789.80571 -1.69 30.87 6592 6592 MS2 20/30 Linfeng_081211_IgG_3.raw High AYSEVDGQVFQGR IPI:IPI00000686.2 1 1 CID 64.39 4.59 1.00 1 2 728.34680 1455.68633 -0.01 30.31 6391 6391 MS2 19/24 Linfeng_081211_IgG_3.raw High VALGETQLVQEVR IPI:IPI00000686.2 1 1 CID 76.98 4.29 1.00 1 2 721.40363 1441.79997 -0.71 34.10 7794 7794 MS2 19/24 Linfeng_081211_IgG_3.raw IPI:IPI00005154.1 709 81.0 6.87 FACT complex subunit SSRP1 11.28 7 4 82.49 3.67 3 2 43.87 7.62 2 2 63.97 6.35 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FGGQLLSFDIGDQPVFEIPLSNVSQcTTGK IPI:IPI00005154.1 1 1 CID C26(Carbamidomethyl) 138.41 7.81 1.00 1 3 1085.53699 3254.59641 -2.32 51.26 5557 5557 MS2 35/116 Linfeng_091611_rIgG_3.raw High FGGQLLSFDIGDQPVFEIPLSNVSQcTTGK IPI:IPI00005154.1 1 1 CID C26(Carbamidomethyl) 300.00 7.35 1.00 1 3 1085.53979 3254.60483 0.27 51.59 6137 6137 MS2 38/116 Linfeng_091811_SIN3A_3.raw High FYVPPTQEDGVDPVEAFAQNVLSK IPI:IPI00005154.1 1 1 CID 135.84 6.76 1.00 1 3 884.10547 2650.30185 -0.67 49.12 5918 5918 MS2 30/92 Linfeng_091611_rIgG_4.raw High ADVIQATGDAIcIFR IPI:IPI00005154.1 1 1 CID C12(Carbamidomethyl) 131.41 6.13 1.00 1 3 550.61444 1649.82877 -1.75 41.91 4929 4929 MS2 35/56 Linfeng_091811_SIN3A_3.raw High ADVIQATGDAIcIFR IPI:IPI00005154.1 1 1 CID C12(Carbamidomethyl) 65.99 5.10 1.00 1 2 825.42151 1649.83574 2.48 43.00 10871 10871 MS2 21/28 Linfeng_081211_IgG_3.raw High ADVIQATGDAIcIFR IPI:IPI00005154.1 1 1 CID C12(Carbamidomethyl) 52.30 4.97 1.00 1 3 550.61591 1649.83316 0.91 43.20 10937 10937 MS2 27/56 Linfeng_081211_IgG_3.raw High FDEISFVNFAR IPI:IPI00005154.1 1 1 CID 65.25 4.10 1.00 1 2 672.83356 1344.65984 1.11 42.22 9885 9885 MS2 18/20 Linfeng_081211_IgG_4.raw IPI:IPI00007084.3 675 74.1 8.62 Calcium-binding mitochondrial carrier protein Aralar2 5.63 3 3 33.00 5.63 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LAVATFAGIENK IPI:IPI00007084.3 2 1 CID 45.43 4.52 1.00 1 2 617.34521 1233.68315 -0.55 34.67 7591 7591 MS2 16/22 Linfeng_081211_IgG_4.raw High LQVAGEITTGPR IPI:IPI00007084.3 4 1 CID 54.67 3.61 1.00 1 2 621.34467 1241.68205 -2.28 28.32 5484 5484 MS2 15/22 Linfeng_081211_IgG_4.raw High AGQTTYSGVIDcFR IPI:IPI00007084.3 4 1 CID C12(Carbamidomethyl) 69.07 3.59 1.00 1 2 787.86572 1574.72417 -1.69 34.76 7615 7615 MS2 18/26 Linfeng_081211_IgG_4.raw IPI:IPI00008529.1 115 11.7 4.54 60S acidic ribosomal protein P2 55.65 5 3 18.62 55.65 3 3 13.65 39.13 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 1 0 CID 34.95 6.99 1.00 1 3 925.47943 2774.42374 -3.01 30.47 3256 3256 MS2 33/128 Linfeng_091811_SIN3A_10.raw High NIEDVIAQGIGK 1 0 CID 72.62 4.56 1.00 1 2 628.84253 1256.67778 -5.39 39.23 4393 4393 MS2 19/22 Linfeng_091811_SIN3A_10.raw High LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK IPI:IPI00008529.1 1 1 CID 1.00 4.19 1.00 1 3 925.48254 2774.43308 0.35 30.16 6191 6191 MS2 23/128 Linfeng_081211_IgG_10.raw High NIEDVIAQGIGK IPI:IPI00008529.1 1 1 CID 55.34 4.04 1.00 1 2 628.84637 1256.68547 0.73 38.82 9005 9005 MS2 18/22 Linfeng_081211_IgG_10.raw High YVASYLLAALGGNSSPSAK IPI:IPI00008529.1 1 1 CID 57.81 3.77 1.00 1 2 934.99353 1868.97978 2.39 43.35 10482 10482 MS2 17/36 Linfeng_081211_IgG_10.raw IPI:IPI00010388.1 599 65.1 4.55 Major centromere autoantigen B 7.35 3 3 39.03 7.35 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIQEVEENPDLR IPI:IPI00010388.1 1 1 CID 70.76 4.70 1.00 1 2 727.87756 1454.74785 -0.53 29.52 6094 6094 MS2 18/22 Linfeng_081211_IgG_3.raw High EAGFGGGPNATITTSLK IPI:IPI00010388.1 1 1 CID 67.87 4.58 1.00 1 2 810.91547 1620.82366 0.49 32.83 7328 7328 MS2 15/32 Linfeng_081211_IgG_3.raw High AGQAGLPcDYTANSK IPI:IPI00010388.1 1 1 CID C8(Carbamidomethyl) 39.43 3.56 1.00 1 2 776.85547 1552.70366 -1.57 25.97 4977 4977 MS2 16/28 Linfeng_081211_IgG_3.raw IPI:IPI00010740.1 707 76.1 9.44 "Isoform Long of Splicing factor, proline- and glutamine-rich" 8.49 6 4 60.27 5.23 3 3 20.54 3.25 1 1 35.57 5.37 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NLSPYVSNELLEEAFSQFGPIER IPI:IPI00010740.1 2 1 CID 80.27 6.54 1.00 1 3 880.43774 2639.29868 -0.08 52.57 6241 6241 MS2 25/88 Linfeng_091811_SIN3A_3.raw High NLSPYVSNELLEEAFSQFGPIER 2 0 CID 98.30 6.21 1.00 1 3 880.43671 2639.29557 -1.26 52.24 5679 5679 MS2 26/88 Linfeng_091611_rIgG_3.raw High FGQGGAGPVGGQGPR IPI:IPI00010740.1 1 1 CID 53.19 4.64 1.00 1 2 671.33276 1341.65825 -5.71 22.64 2356 2356 MS2 19/28 Linfeng_091811_SIN3A_3.raw High FGQGGAGPVGGQGPR IPI:IPI00010740.1 1 1 CID 27.09 4.50 1.00 1 2 671.33466 1341.66203 -2.89 24.10 4357 4357 MS2 18/28 Linfeng_081211_IgG_3.raw High FATHAAALSVR IPI:IPI00010740.1 2 1 CID 25.76 4.09 1.00 1 3 381.88010 1143.62574 -1.08 26.72 5220 5220 MS2 22/40 Linfeng_081211_IgG_3.raw High YGEPGEVFINK IPI:IPI00010740.1 2 1 CID 39.75 3.49 1.00 1 2 626.81354 1252.61980 -0.86 32.15 7059 7059 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00011253.3 243 26.7 9.66 40S ribosomal protein S3 13.99 4 3 33.13 13.99 3 3 11.76 5.35 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELAEDGYSGVEVR 1 0 CID 63.22 4.54 1.00 1 2 712.33630 1423.66533 -3.30 28.48 2959 2959 MS2 19/24 Linfeng_091811_SIN3A_7.raw High ELAEDGYSGVEVR IPI:IPI00011253.3 1 1 CID 67.49 4.34 1.00 1 2 712.33826 1423.66924 -0.56 28.93 5681 5681 MS2 21/24 Linfeng_081211_IgG_7.raw High GLcAIAQAESLR IPI:IPI00011253.3 3 1 CID C3(Carbamidomethyl) 64.55 3.83 1.00 1 2 644.83759 1288.66789 0.02 33.24 7204 7204 MS2 16/22 Linfeng_081211_IgG_7.raw High TEIIILATR IPI:IPI00011253.3 1 1 CID 53.08 3.77 1.00 1 2 515.31702 1029.62676 -3.46 35.11 7882 7882 MS2 14/16 Linfeng_081211_IgG_7.raw IPI:IPI00013215.2 861 97.3 9.22 Origin recognition complex subunit 1 4.41 3 3 22.47 4.41 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLAAQEPASVLEEAR IPI:IPI00013215.2 1 1 CID 22.65 4.95 1.00 1 2 785.90759 1570.80791 0.44 33.61 7619 7619 MS2 19/28 Linfeng_081211_IgG_3.raw High NSSVLEQSFLR IPI:IPI00013215.2 1 1 CID 54.06 4.10 1.00 1 2 640.33435 1279.66142 -2.12 36.14 8548 8548 MS2 15/20 Linfeng_081211_IgG_3.raw High AFEDDAIQLVAR IPI:IPI00013215.2 1 1 CID 68.68 4.09 1.00 1 2 674.34833 1347.68938 -0.74 38.40 9324 9324 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00019038.1 148 16.5 9.16 Lysozyme C 8.11 4 1 35.95 8.11 3 1 13.28 8.11 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High STDYGIFQINSR IPI:IPI00019038.1 1 1 CID 70.96 4.54 1.00 1 2 700.84283 1400.67839 -1.51 36.11 8064 8064 MS2 18/22 Linfeng_081211_IgG_10.raw High STDYGIFQINSR 1 0 CID 81.69 4.36 1.00 1 2 700.84094 1400.67461 -4.21 36.24 4009 4009 MS2 18/22 Linfeng_091811_SIN3A_10.raw High STDYGIFQINSR IPI:IPI00019038.1 1 1 CID 42.88 4.28 1.00 1 2 700.84259 1400.67790 -1.86 36.64 8357 8357 MS2 17/22 Linfeng_081211_IgG_7.raw High STDYGIFQINSR IPI:IPI00019038.1 1 1 CID 51.51 4.20 1.00 1 2 700.84424 1400.68120 0.49 44.32 7471 7471 MS2 15/22 Linfeng_081211_IgG_1.raw IPI:IPI00019488.1 184 21.8 9.50 U3 small nucleolar ribonucleoprotein protein IMP3 13.59 3 2 28.02 13.59 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VGPDVVTDPAFLVTR IPI:IPI00019488.1 1 1 CID 114.47 4.49 1.00 1 2 793.43262 1585.85796 -0.36 39.42 9402 9402 MS2 17/28 Linfeng_081211_IgG_8.raw High VGPDVVTDPAFLVTR IPI:IPI00019488.1 1 1 CID 120.05 4.08 1.00 1 2 793.43237 1585.85747 -0.66 39.39 9391 9391 MS2 15/28 Linfeng_081211_IgG_8.raw High LYALGLVPTR IPI:IPI00019488.1 1 1 CID 54.02 3.64 1.00 1 2 551.83386 1102.66045 -1.36 37.33 8740 8740 MS2 16/18 Linfeng_081211_IgG_8.raw IPI:IPI00025815.2 416 45.0 6.34 TDP43 7.21 3 2 22.78 7.21 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FGGNPGGFGNQGGFGNSR IPI:IPI00025815.2 2 1 CID 125.18 4.58 1.00 1 2 863.88715 1726.76702 -0.66 30.59 6161 6161 MS2 21/34 Linfeng_081211_IgG_5.raw High TSDLIVLGLPWK IPI:IPI00025815.2 2 1 CID 61.37 4.42 1.00 1 2 671.39301 1341.77873 0.75 45.68 10735 10735 MS2 17/22 Linfeng_081211_IgG_5.raw High FGGNPGGFGNQGGFGNSR IPI:IPI00025815.2 2 1 CID 39.91 3.61 1.00 1 2 863.88763 1726.76799 -0.09 30.66 6341 6341 MS2 15/34 Linfeng_081211_IgG_6.raw IPI:IPI00027252.6 299 33.3 9.83 Prohibitin-2 21.74 7 5 26.79 11.71 3 3 35.54 18.39 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IGGVQQDTILAEGLHFR IPI:IPI00027252.6 2 1 CID 60.13 5.85 1.00 1 3 618.66516 1853.98093 -3.23 37.92 4362 4362 MS2 28/64 Linfeng_091611_rIgG_7.raw High LLLGAGAVAYGVR IPI:IPI00027252.6 2 1 CID 76.96 4.56 1.00 1 2 630.37567 1259.74407 -2.41 36.09 4127 4127 MS2 19/24 Linfeng_091611_rIgG_7.raw High LLLGAGAVAYGVR IPI:IPI00027252.6 2 1 CID 61.73 4.51 1.00 1 2 630.37616 1259.74504 -1.63 36.63 8354 8354 MS2 21/24 Linfeng_081211_IgG_7.raw High IVQAEGEAEAAK IPI:IPI00027252.6 1 1 CID 82.59 4.25 1.00 1 2 608.31311 1215.61894 -2.21 18.79 1798 1798 MS2 20/22 Linfeng_091611_rIgG_7.raw High IPWFQYPIIYDIR IPI:IPI00027252.6 2 1 CID 61.47 4.08 1.00 1 2 862.46143 1723.91557 -2.97 49.60 5828 5828 MS2 16/24 Linfeng_091611_rIgG_7.raw High FNASQLITQR IPI:IPI00027252.6 2 1 CID 49.27 3.89 1.00 1 2 589.31995 1177.63262 0.15 32.78 7036 7036 MS2 15/18 Linfeng_081211_IgG_7.raw High IVQAEGEAEAAK IPI:IPI00027252.6 1 1 CID 31.39 3.65 1.00 1 2 608.31396 1215.62065 -0.80 19.99 2899 2899 MS2 18/22 Linfeng_081211_IgG_7.raw IPI:IPI00029744.1 148 17.2 9.60 "Single-stranded DNA-binding protein, mitochondrial" 32.43 4 3 26.09 32.43 3 3 11.35 10.14 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGDSEVYQLGDVSQK 4 0 CID 78.33 5.24 1.00 1 2 806.37628 1611.74529 -2.76 29.74 3157 3157 MS2 19/28 Linfeng_091811_SIN3A_10.raw High SGDSEVYQLGDVSQK IPI:IPI00029744.1 4 1 CID 78.32 5.20 1.00 1 2 806.37830 1611.74932 -0.26 29.74 6038 6038 MS2 20/28 Linfeng_081211_IgG_10.raw High NPVTIFSLATNEmWR IPI:IPI00029744.1 4 1 CID M13(Oxidation) 71.64 4.22 1.00 1 2 897.94812 1794.88896 2.53 44.07 10704 10704 MS2 16/28 Linfeng_081211_IgG_10.raw High QATTIIADNIIFLSDQTK IPI:IPI00029744.1 1 1 CID 52.81 4.16 1.00 1 2 996.53839 1992.06951 2.32 44.15 10729 10729 MS2 18/34 Linfeng_081211_IgG_10.raw IPI:IPI00030275.5 704 80.1 8.21 "Heat shock protein 75 kDa, mitochondrial" 3.69 4 2 44.95 3.69 3 2 14.78 1.99 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVVDSEDIPLNLSR IPI:IPI00030275.5 2 1 CID 78.45 5.26 1.00 2 2 757.39581 1513.78435 -0.92 36.67 8719 8719 MS2 22/26 Linfeng_081211_IgG_3.raw High GVVDSEDIPLNLSR 2 0 CID 69.88 4.72 1.00 2 2 757.39117 1513.77507 -7.05 35.75 4134 4134 MS2 21/26 Linfeng_091811_SIN3A_3.raw High GVVDSEDIPLNLSR IPI:IPI00030275.5 2 1 CID 70.30 4.68 1.00 2 2 757.39648 1513.78569 -0.03 36.13 8201 8201 MS2 19/26 Linfeng_081211_IgG_6.raw High ELISNASDALEK IPI:IPI00030275.5 1 1 CID 37.78 3.97 1.00 1 2 645.33203 1289.65679 -1.25 30.01 6057 6057 MS2 14/22 Linfeng_081211_IgG_4.raw IPI:IPI00031554.1 737 82.5 9.17 ATP-dependent RNA helicase DDX50 8.41 5 4 65.88 5.43 3 3 30.76 2.99 1 1 51.00 2.99 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GAVDALAAALAHISGASSFEPR IPI:IPI00031554.1 1 1 CID 138.41 7.30 1.00 1 3 704.36774 2111.08866 0.26 50.37 5989 5989 MS2 38/84 Linfeng_091811_SIN3A_3.raw High GAVDALAAALAHISGASSFEPR 1 0 CID 135.76 6.26 1.00 1 3 704.36652 2111.08500 -1.48 50.11 5414 5414 MS2 36/84 Linfeng_091611_rIgG_3.raw High LPEIEEYYDGNTSSNSR IPI:IPI00031554.1 1 1 CID 67.63 4.56 1.00 1 2 987.43933 1973.87139 -0.49 34.22 7842 7842 MS2 18/32 Linfeng_081211_IgG_3.raw High LSSNAVSQITR IPI:IPI00031554.1 1 1 CID 49.00 4.15 1.00 1 2 588.32147 1175.63567 -1.92 26.80 5247 5247 MS2 17/20 Linfeng_081211_IgG_3.raw High NGIDILVGTPGR IPI:IPI00015953.3;IPI:IPI00031554.1 3 2 CID 57.57 3.68 1.00 1 2 606.34100 1211.67473 0.33 36.54 8674 8674 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00031627.4 1970 217.0 7.37 DNA-directed RNA polymerase II subunit RPB1 3.30 4 4 84.59 2.34 3 3 44.87 0.96 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TTSNDIVEIFTVLGIEAVR IPI:IPI00031627.4 1 1 CID 47.77 5.21 1.00 1 3 693.04504 2077.12058 1.40 54.94 6355 6355 MS2 24/72 Linfeng_091611_rIgG_2.raw High INISQVIAVVGQQNVEGK IPI:IPI00031627.4 1 1 CID 12.05 4.38 1.00 1 3 632.69031 1896.05637 0.73 49.77 8974 8974 MS2 25/68 Linfeng_081211_IgG_1.raw High NSINQVVQLR IPI:IPI00031627.4 1 1 CID 36.24 3.77 1.00 1 2 585.83246 1170.65764 -1.15 39.67 6105 6105 MS2 15/18 Linfeng_081211_IgG_1.raw High TVITPDPNLSIDQVGVPR IPI:IPI00031627.4 1 1 CID 51.61 3.59 1.00 1 2 961.02301 1921.03874 -0.14 43.39 7178 7178 MS2 13/34 Linfeng_081211_IgG_1.raw IPI:IPI00031661.1 516 58.4 7.49 Nucleolar complex protein 4 homolog 9.11 4 2 58.28 9.11 3 2 10.10 4.07 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SEANAVFDILAVLQSEDQEEIQEAVR IPI:IPI00031661.1 1 1 CID 105.21 6.17 1.00 1 3 968.48450 2903.43894 4.10 54.40 12654 12654 MS2 29/100 Linfeng_081211_IgG_5.raw High LVVGGLLSPEEDQSLLLSQFR IPI:IPI00031661.1 1 1 CID 106.52 4.94 1.00 1 2 1150.63159 2300.25591 2.68 48.93 11537 11537 MS2 20/40 Linfeng_081211_IgG_5.raw High LVVGGLLSPEEDQSLLLSQFR 1 0 CID 82.84 4.89 1.00 1 3 767.42023 2300.24613 -1.58 49.25 5891 5891 MS2 35/80 Linfeng_091611_rIgG_5.raw High LVVGGLLSPEEDQSLLLSQFR IPI:IPI00031661.1 1 1 CID 81.48 4.55 1.00 1 3 767.42285 2300.25400 1.85 48.96 11546 11546 MS2 27/80 Linfeng_081211_IgG_5.raw IPI:IPI00032003.1 254 29.0 5.50 Emerin 18.11 8 3 40.64 18.11 3 3 38.93 14.17 3 2 48.02 14.17 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LSPPSSSAASSYSFSDLNSTR 1 0 CID 68.84 5.52 1.00 1 3 721.00342 2160.99570 -4.05 33.57 3639 3639 MS2 29/80 Linfeng_091811_SIN3A_7.raw High LSPPSSSAASSYSFSDLNSTR 1 0 CID 63.34 5.51 1.00 1 3 721.00421 2160.99808 -2.95 33.28 3768 3768 MS2 32/80 Linfeng_091611_rIgG_7.raw High LSPPSSSAASSYSFSDLNSTR IPI:IPI00032003.1 1 1 CID 87.26 5.45 1.00 1 3 721.00696 2161.00632 0.87 33.66 7343 7343 MS2 29/80 Linfeng_081211_IgG_7.raw High GYNDDYYEESYFTTR IPI:IPI00032003.1 2 1 CID 123.30 5.08 1.00 1 2 961.88806 1922.76885 -1.41 35.27 7932 7932 MS2 19/28 Linfeng_081211_IgG_7.raw High GYNDDYYEESYFTTR 2 0 CID 132.06 4.87 1.00 1 2 961.88623 1922.76518 -3.31 35.12 3835 3835 MS2 20/28 Linfeng_091811_SIN3A_7.raw High LSPPSSSAASSYSFSDLNSTR 1 0 CID 300.00 4.73 1.00 1 2 1081.00342 2160.99956 -2.26 33.32 3772 3772 MS2 25/40 Linfeng_091611_rIgG_7.raw High GYNDDYYEESYFTTR 2 0 CID 124.08 4.38 1.00 1 2 961.88733 1922.76738 -2.17 34.83 3964 3964 MS2 20/28 Linfeng_091611_rIgG_7.raw High KEDALLYQSK IPI:IPI00032003.1 2 1 CID 45.81 4.04 1.00 1 2 597.81976 1194.63225 -3.58 23.49 3989 3989 MS2 15/18 Linfeng_081211_IgG_7.raw IPI:IPI00157845.3 1023 113.8 7.52 Isoform 2 of Nucleolar protein 6 3.03 3 2 71.37 3.03 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ETSSTGEEALVAAVR IPI:IPI00157845.3 3 1 CID 60.57 4.64 1.00 1 2 760.38269 1519.75810 -1.20 33.20 6692 6692 MS2 17/28 Linfeng_081211_IgG_2.raw High ETSSTGEEALVAAVR IPI:IPI00157845.3 3 1 CID 46.05 4.31 1.00 1 2 760.38220 1519.75713 -1.84 32.86 7340 7340 MS2 15/28 Linfeng_081211_IgG_3.raw High GQSPAGDGSPEPPTPR IPI:IPI00157845.3 4 1 CID 62.02 3.92 1.00 1 2 775.36578 1549.72429 0.05 22.70 3858 3858 MS2 15/30 Linfeng_081211_IgG_3.raw IPI:IPI00157908.4 609 66.3 8.94 "Isoform 3 of Apoptosis-inducing factor 1, mitochondrial" 6.57 3 3 40.44 6.57 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TGGLEIDSDFGGFR IPI:IPI00157908.4 4 1 CID 41.13 4.14 1.00 1 2 735.84784 1470.68840 1.61 38.82 8884 8884 MS2 14/26 Linfeng_081211_IgG_4.raw High AALSASEGEEVPQDK IPI:IPI00157908.4 3 1 CID 40.28 3.91 1.00 1 2 765.86859 1530.72991 1.05 23.85 4107 4107 MS2 15/28 Linfeng_081211_IgG_4.raw High LNDGSQITYEK IPI:IPI00157908.4 3 1 CID 74.71 3.80 1.00 1 2 634.31195 1267.61662 0.09 23.49 3984 3984 MS2 14/20 Linfeng_081211_IgG_4.raw IPI:IPI00163084.3 855 99.9 6.23 Pre-mRNA-splicing factor SYF1 4.21 3 3 38.39 4.21 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EIINTYTEAVQTVDPFK IPI:IPI00163084.3 1 1 CID 64.73 4.13 1.00 1 2 984.50439 1968.00151 2.74 44.34 11317 11317 MS2 19/32 Linfeng_081211_IgG_3.raw High AEQLAAEAER IPI:IPI00163084.3 1 1 CID 44.98 3.84 1.00 1 2 544.27307 1087.53887 0.90 22.14 3665 3665 MS2 16/18 Linfeng_081211_IgG_3.raw High HENYDEALR IPI:IPI00163084.3 1 1 CID 62.59 3.54 1.00 1 2 573.76257 1146.51787 0.36 22.55 3806 3806 MS2 14/16 Linfeng_081211_IgG_3.raw IPI:IPI00166729.4 298 34.2 6.05 Zinc-alpha-2-glycoprotein 7.38 3 2 31.10 7.38 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AYLEEEcPATLR IPI:IPI00166729.4 2 1 CID C7(Carbamidomethyl) 72.23 4.46 1.00 1 2 726.34485 1451.68242 -0.79 29.80 6051 6051 MS2 18/22 Linfeng_081211_IgG_6.raw High AYLEEEcPATLR IPI:IPI00166729.4 2 1 CID C7(Carbamidomethyl) 70.76 4.42 1.00 1 2 726.34387 1451.68047 -2.13 30.71 6540 6540 MS2 18/22 Linfeng_081211_IgG_3.raw High AGEVQEPELR IPI:IPI00166729.4 3 1 CID 26.48 3.54 1.00 1 2 564.28650 1127.56572 -3.08 24.39 4451 4451 MS2 13/18 Linfeng_081211_IgG_6.raw IPI:IPI00179700.3 107 11.7 10.32 Isoform HMG-I of High mobility group protein HMG-I/HMG-Y 32.71 4 3 59.70 32.71 3 3 16.70 14.95 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KLEKEEEEGISQESSEEEQ IPI:IPI00179700.3 3 1 CID 84.53 5.51 1.00 1 3 746.33405 2236.98758 -2.89 30.05 4835 4835 MS2 26/72 Linfeng_081211_IgG_9.raw High KQPPVSPGTALVGSQK 4 0 CID 61.29 4.30 1.00 1 3 531.96832 1593.89042 -3.48 23.58 2425 2425 MS2 31/60 Linfeng_091811_SIN3A_9.raw High KQPPVSPGTALVGSQK IPI:IPI00179700.3 4 1 CID 19.99 4.27 1.00 1 3 531.97095 1593.89829 1.46 34.33 5697 5697 MS2 24/60 Linfeng_081211_IgG_9.raw High EEEEGISQESSEEEQ IPI:IPI00179700.3 3 1 CID 116.48 3.94 1.00 1 2 869.84131 1738.67534 -1.20 22.81 3927 3927 MS2 20/28 Linfeng_081211_IgG_10.raw IPI:IPI00186338.1 86 9.7 6.09 similar to barrier to autointegration factor 1 44.19 9 3 17.45 41.86 3 2 10.20 41.86 2 2 18.84 44.19 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DFVAEPmGEKPVGSLAGIGEVLGK 2 0 CID M7(Oxidation) 72.59 5.71 1.00 1 3 806.08484 2416.23996 -1.26 39.74 4275 4275 MS2 29/92 Linfeng_091611_rIgG_10.raw High DFVAEPmGEKPVGSLAGIGEVLGK IPI:IPI00186338.1 2 1 CID M7(Oxidation) 136.37 5.30 1.00 1 3 806.08307 2416.23465 -3.45 39.96 4486 4486 MS2 31/92 Linfeng_091811_SIN3A_10.raw High DFVAEPmGEKPVGSLAGIGEVLGK 2 0 CID M7(Oxidation) 35.07 4.85 1.00 1 3 806.08862 2416.25132 3.44 39.38 9205 9205 MS2 29/92 Linfeng_081211_IgG_10.raw High HRDFVAEPmGEKPVGSLAGIGEVLGK IPI:IPI00186338.1 2 1 CID M9(Oxidation) 68.23 4.71 1.00 1 4 678.10358 2709.39248 -3.89 34.39 3772 3772 MS2 41/150 Linfeng_091811_SIN3A_10.raw High AYVVLGQFLVLK 2 0 CID 71.10 4.65 1.00 1 2 675.41187 1349.81645 -2.03 45.67 11102 11102 MS2 19/22 Linfeng_081211_IgG_10.raw High AYVVLGQFLVLK IPI:IPI00186338.1 2 1 CID 74.38 4.52 1.00 1 2 675.40979 1349.81230 -5.10 46.27 5286 5286 MS2 19/22 Linfeng_091811_SIN3A_10.raw High DFVAEPMGEKPVGSLAGIGEVLGK 2 0 CID 53.10 4.50 1.00 1 3 800.75500 2400.25046 0.99 41.46 9890 9890 MS2 25/92 Linfeng_081211_IgG_10.raw High AYVVLGQFLVLK 2 0 CID 63.43 4.49 1.00 1 2 675.40936 1349.81145 -5.74 46.04 5068 5068 MS2 19/22 Linfeng_091611_rIgG_10.raw High AYVVLGQFLVLK IPI:IPI00186338.1 2 1 CID 67.88 4.31 1.00 1 2 675.41168 1349.81609 -2.30 46.20 5467 5467 MS2 19/22 Linfeng_091811_SIN3A_1.raw IPI:IPI00216730.3 130 14.0 10.89 Histone H2A type 2-B 30.00 16 3 146.36 24.62 3 2 77.63 17.69 5 1 86.01 23.08 8 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLGGVTIAQGGVLPNIQAVLLPK 3 0 CID 91.01 7.25 1.00 1 2 1136.19446 2271.38164 0.73 49.58 5508 5508 MS2 21/44 Linfeng_091611_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 97.66 6.87 1.00 1 2 1136.18896 2271.37065 -4.11 49.93 5727 5727 MS2 20/44 Linfeng_091811_SIN3A_10.raw High NDEELNKLLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 127.56 6.46 1.00 1 3 1038.59216 3113.76194 1.57 51.37 5903 5903 MS2 30/116 Linfeng_091811_SIN3A_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 74.25 6.37 1.00 1 2 1136.19128 2271.37529 -2.07 50.16 5836 5836 MS2 16/44 Linfeng_091811_SIN3A_9.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 128.20 5.96 1.00 1 4 568.59937 2271.37563 -1.92 49.98 5733 5733 MS2 44/132 Linfeng_091811_SIN3A_10.raw High NDEELNKLLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 137.96 5.41 1.00 1 4 779.19525 3113.75918 0.69 51.34 5899 5899 MS2 46/174 Linfeng_091811_SIN3A_10.raw High LLGGVTIAQGGVLPNIQAVLLPK 3 0 CID 134.83 5.10 1.00 1 3 757.79730 2271.37735 -1.16 50.54 5626 5626 MS2 32/88 Linfeng_091611_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 124.57 4.98 1.00 1 3 757.79755 2271.37809 -0.84 49.84 5717 5717 MS2 34/88 Linfeng_091811_SIN3A_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 100.52 4.97 1.00 1 3 757.79791 2271.37918 -0.36 49.94 5810 5810 MS2 33/88 Linfeng_091811_SIN3A_9.raw High LLGGVTIAQGGVLPNIQAVLLPK 3 0 CID 86.55 4.86 1.00 1 3 757.79706 2271.37662 -1.48 49.52 5500 5500 MS2 30/88 Linfeng_091611_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK 3 0 CID 103.93 4.80 1.00 1 4 568.59979 2271.37734 -1.17 49.64 5515 5515 MS2 42/132 Linfeng_091611_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 50.72 4.68 1.00 1 3 757.79688 2271.37607 -1.73 49.85 5924 5924 MS2 30/88 Linfeng_091811_SIN3A_1.raw High LLGGVTIAQGGVLPNIQAVLLPK 3 0 CID 42.58 4.55 1.00 1 3 757.79822 2271.38010 0.05 54.22 6049 6049 MS2 29/88 Linfeng_091611_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK IPI:IPI00216730.3 3 1 CID 70.99 4.31 1.00 1 3 757.79858 2271.38120 0.53 50.36 12021 12021 MS2 26/88 Linfeng_081211_IgG_8.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 44.14 3.53 1.00 1 2 472.76935 944.53142 0.15 33.07 7089 7089 MS2 13/16 Linfeng_081211_IgG_10.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 50.13 3.48 1.00 1 2 472.76831 944.52934 -2.05 32.00 6788 6788 MS2 13/16 Linfeng_081211_IgG_10.raw IPI:IPI00217468.3 226 22.6 10.92 Histone H1.5 11.06 4 2 110.68 11.06 3 2 74.21 5.31 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KATGPPVSELITK IPI:IPI00217468.3 1 1 CID 72.09 4.78 1.00 1 2 670.89240 1340.77751 -0.71 28.15 5399 5399 MS2 19/24 Linfeng_081211_IgG_7.raw High KALAAGGYDVEK IPI:IPI00217468.3 1 1 CID 62.94 4.65 1.00 1 3 407.88599 1221.64341 -3.30 22.37 3650 3650 MS2 29/44 Linfeng_081211_IgG_7.raw High KALAAGGYDVEK 1 0 CID 56.41 4.57 1.00 1 3 407.88635 1221.64450 -2.40 21.06 2120 2120 MS2 29/44 Linfeng_091611_rIgG_7.raw High KALAAGGYDVEK IPI:IPI00217468.3 1 1 CID 47.70 3.78 1.00 1 2 611.32599 1221.64470 -2.24 22.38 3652 3652 MS2 14/22 Linfeng_081211_IgG_7.raw IPI:IPI00217471.3 147 16.2 8.63 Hemoglobin subunit epsilon 25.17 3 3 34.89 25.17 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High mNVEEAGGEALGR IPI:IPI00217471.3 2 1 CID M1(Oxidation) 83.68 4.75 1.00 1 2 674.81024 1348.61321 -2.25 24.57 4468 4468 MS2 21/24 Linfeng_081211_IgG_10.raw High LVSAVAIALAHK IPI:IPI00217471.3 1 1 CID 49.63 3.79 1.00 1 2 596.87366 1192.74004 -1.04 33.23 7150 7150 MS2 14/22 Linfeng_081211_IgG_10.raw High EFTPEVQAAWQK IPI:IPI00217471.3 1 1 CID 29.03 3.55 1.00 1 2 717.35669 1433.70610 0.06 32.98 7055 7055 MS2 17/22 Linfeng_081211_IgG_10.raw IPI:IPI00217473.5 142 15.6 8.21 Hemoglobin subunit zeta 29.58 3 3 41.90 29.58 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISTQADTIGTETLER IPI:IPI00217473.5 1 1 CID 89.10 5.06 1.00 1 2 817.91473 1634.82219 -0.64 29.36 5897 5897 MS2 20/28 Linfeng_081211_IgG_10.raw High FPADFTAEAHAAWDK IPI:IPI00217473.5 1 1 CID 74.25 4.08 1.00 1 3 559.59509 1676.77073 0.18 34.94 7748 7748 MS2 23/56 Linfeng_081211_IgG_10.raw High FLSVVSSVLTEK IPI:IPI00217473.5 1 1 CID 31.66 3.84 1.00 1 2 654.87549 1308.74370 2.06 39.68 9300 9300 MS2 16/22 Linfeng_081211_IgG_10.raw IPI:IPI00217862.5 475 51.8 7.85 U3 small nucleolar RNA-interacting protein 2 12.84 5 3 102.37 5.89 3 2 37.85 10.74 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GEPGLEQPFWISSVAALLNTDLVATGSHSScVR IPI:IPI00217862.5 1 1 CID C31(Carbamidomethyl) 74.81 5.93 1.00 1 4 875.44012 3498.73867 1.80 54.49 6518 6518 MS2 30/192 Linfeng_091611_rIgG_5.raw High QLDLLcDIPLVGFINSLK IPI:IPI00217862.5 1 1 CID C6(Carbamidomethyl) 37.52 5.10 1.00 1 3 686.71655 2058.13510 2.25 55.06 6590 6590 MS2 27/68 Linfeng_091611_rIgG_5.raw High QLDLLcDIPLVGFINSLK IPI:IPI00217862.5 1 1 CID C6(Carbamidomethyl) 36.03 3.95 1.00 1 2 1029.57202 2058.13677 3.06 54.76 12764 12764 MS2 15/34 Linfeng_081211_IgG_5.raw High AFEEDQVAGR IPI:IPI00217862.5 1 1 CID 44.20 3.78 1.00 1 2 561.26367 1121.52007 -1.94 23.64 3927 3927 MS2 16/18 Linfeng_081211_IgG_5.raw High AFEEDQVAGR IPI:IPI00217862.5 1 1 CID 32.57 3.49 1.00 1 2 561.26288 1121.51848 -3.35 23.31 4118 4118 MS2 16/18 Linfeng_081211_IgG_6.raw IPI:IPI00218592.5 201 22.4 7.94 "Isoform ASF-3 of Splicing factor, arginine/serine-rich 1" 18.41 3 3 41.60 18.41 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EAGDVcYADVYR IPI:IPI00218592.5 4 1 CID C6(Carbamidomethyl) 80.22 3.97 1.00 1 2 709.30597 1417.60466 -0.45 29.57 5898 5898 MS2 17/22 Linfeng_081211_IgG_7.raw High IYVGNLPPDIR IPI:IPI00218592.5 3 1 CID 47.17 3.78 1.00 1 2 628.85291 1256.69853 -1.01 33.68 7352 7352 MS2 14/20 Linfeng_081211_IgG_7.raw High GGPPFAFVEFEDPR IPI:IPI00218592.5 3 1 CID 42.92 3.74 1.00 1 2 782.87671 1564.74614 1.90 42.88 10419 10419 MS2 15/26 Linfeng_081211_IgG_7.raw IPI:IPI00219156.7 115 12.8 9.63 60S ribosomal protein L30 50.43 5 4 26.47 33.91 3 3 21.94 26.96 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VcTLAIIDPGDSDIIR IPI:IPI00219156.7 4 1 CID C2(Carbamidomethyl) 58.76 5.09 1.00 1 2 879.45941 1757.91155 0.71 40.01 9416 9416 MS2 18/30 Linfeng_081211_IgG_10.raw High TGVHHYSGNNIELGTAcGK IPI:IPI00219156.7 3 1 CID C17(Carbamidomethyl) 66.34 4.93 1.00 1 3 672.31677 2014.93576 -2.11 21.90 2071 2071 MS2 27/72 Linfeng_091811_SIN3A_10.raw High LVILANNcPALR IPI:IPI00219156.7 3 1 CID C8(Carbamidomethyl) 40.43 4.12 1.00 1 2 677.38409 1353.76091 -4.63 34.01 3724 3724 MS2 17/22 Linfeng_091811_SIN3A_10.raw High SEIEYYAmLAK IPI:IPI00219156.7 2 1 CID M8(Oxidation) 49.23 4.05 1.00 1 2 667.32013 1333.63298 -1.12 33.93 7402 7402 MS2 17/20 Linfeng_081211_IgG_10.raw High LVILANNcPALR IPI:IPI00219156.7 3 1 CID C8(Carbamidomethyl) 53.30 3.73 1.00 1 2 677.38623 1353.76518 -1.48 33.60 7286 7286 MS2 15/22 Linfeng_081211_IgG_10.raw IPI:IPI00219221.3 136 15.1 7.62 Galectin-7 19.85 3 2 22.73 19.85 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LDTSEVVFNSK IPI:IPI00219221.3 1 1 CID 26.27 4.17 1.00 1 2 619.81665 1238.62602 -0.27 30.63 6331 6331 MS2 13/20 Linfeng_081211_IgG_6.raw High LDTSEVVFNSK IPI:IPI00219221.3 1 1 CID 44.87 3.76 1.00 1 2 619.81757 1238.62786 1.21 30.70 6295 6295 MS2 13/20 Linfeng_081211_IgG_4.raw High GQPFEVLIIASDDGFK IPI:IPI00219221.3 1 1 CID 52.10 3.72 1.00 1 2 868.45209 1735.89690 3.85 46.02 11183 11183 MS2 16/30 Linfeng_081211_IgG_10.raw IPI:IPI00291916.5 1821 206.5 8.85 PH-interacting protein 3.84 7 5 87.76 1.65 3 2 68.43 3.19 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HLAPDHLLQIcHR IPI:IPI00291916.5 1 1 CID C11(Carbamidomethyl) 38.06 5.14 1.00 1 4 403.21332 1609.83144 -4.10 26.69 2825 2825 MS2 29/72 Linfeng_091611_rIgG_2.raw High YHDmPDVIDFLVLR IPI:IPI00291916.5 6 1 CID M4(Oxidation) 37.83 4.70 1.00 1 3 583.62616 1748.86393 -2.16 44.47 5118 5118 MS2 24/52 Linfeng_091611_rIgG_2.raw High VVVDPVVTEQPSTSSAAK IPI:IPI00291916.5 2 1 CID 79.18 4.69 1.00 1 2 907.47760 1813.94792 -3.50 27.81 2973 2973 MS2 16/34 Linfeng_091611_rIgG_2.raw High VVVDPVVTEQPSTSSAAK IPI:IPI00291916.5 2 1 CID 69.93 4.61 1.00 1 2 907.48083 1813.95439 0.07 29.42 5545 5545 MS2 16/34 Linfeng_081211_IgG_2.raw High VVVDPVVTEQPSTSSAAK IPI:IPI00291916.5 2 1 CID 50.07 4.28 1.00 1 2 907.47998 1813.95268 -0.87 32.12 4549 4549 MS2 16/34 Linfeng_081211_IgG_1.raw High SESSTSAFSTPTR IPI:IPI00291916.5 2 1 CID 63.40 4.20 1.00 1 2 679.31305 1357.61882 -3.12 22.62 2258 2258 MS2 18/24 Linfeng_091611_rIgG_2.raw High LDADLLVPASVK IPI:IPI00291916.5 1 1 CID 34.03 3.46 1.00 1 2 620.86206 1240.71684 1.65 37.52 9022 9022 MS2 12/22 Linfeng_081211_IgG_3.raw IPI:IPI00292135.1 615 70.7 9.36 Lamin-B receptor 4.88 5 2 45.27 4.88 3 2 20.24 3.09 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NDLSPASSGNAVYDFFIGR IPI:IPI00292135.1 1 1 CID 113.45 6.46 1.00 1 2 1015.48370 2029.96013 -0.67 46.28 10892 10892 MS2 24/36 Linfeng_081211_IgG_5.raw High NDLSPASSGNAVYDFFIGR 1 0 CID 69.48 6.17 1.00 1 3 677.32385 2029.95700 -2.21 46.38 5578 5578 MS2 34/72 Linfeng_091611_rIgG_4.raw High NDLSPASSGNAVYDFFIGR 1 0 CID 136.00 5.89 1.00 1 2 1015.48254 2029.95781 -1.81 46.39 5579 5579 MS2 24/36 Linfeng_091611_rIgG_4.raw High VVEGTPLIDGR IPI:IPI00292135.1 1 1 CID 65.28 3.57 1.00 1 2 578.32080 1155.63432 -2.21 28.93 5753 5753 MS2 14/20 Linfeng_081211_IgG_6.raw High VVEGTPLIDGR IPI:IPI00292135.1 1 1 CID 52.26 3.50 1.00 1 2 578.32129 1155.63530 -1.37 29.15 5628 5628 MS2 13/20 Linfeng_081211_IgG_5.raw IPI:IPI00297579.4 183 20.8 5.33 Chromobox protein homolog 3 32.24 5 4 32.45 31.69 3 3 22.57 7.65 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GFTDADNTWEPEENLDcPELIEAFLNSQK IPI:IPI00297579.4 1 1 CID C17(Carbamidomethyl) 116.19 5.75 1.00 1 3 1128.17456 3382.50913 0.99 50.96 12142 12142 MS2 23/112 Linfeng_081211_IgG_8.raw High KVEEAEPEEFVVEK IPI:IPI00917646.1 3 1 CID 70.94 4.92 1.00 1 2 831.41418 1661.82109 -3.53 28.25 2998 2998 MS2 21/26 Linfeng_091811_SIN3A_8.raw High KVEEAEPEEFVVEK IPI:IPI00917646.1 3 1 CID 64.36 4.90 1.00 1 3 554.61151 1661.81998 -4.19 28.28 3002 3002 MS2 27/52 Linfeng_091811_SIN3A_8.raw High VEEAEPEEFVVEK IPI:IPI00297579.4 3 1 CID 59.10 4.76 1.00 1 2 767.36829 1533.72930 -1.75 31.26 6713 6713 MS2 17/24 Linfeng_081211_IgG_8.raw High IIGATDSSGELmFLmK IPI:IPI00297579.4 3 1 CID "M12(Oxidation), M15(Oxidation)" 82.74 3.55 1.00 1 2 872.93365 1744.86003 5.93 36.71 8264 8264 MS2 13/30 Linfeng_081211_IgG_10.raw IPI:IPI00299573.12 266 30.0 10.61 60S ribosomal protein L7a 16.54 4 4 43.20 15.79 3 3 13.54 6.02 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LKVPPAINQFTQALDR IPI:IPI00478896.3 3 1 CID 55.15 5.90 1.00 1 3 604.34332 1811.01542 -1.14 39.61 4579 4579 MS2 30/60 Linfeng_091611_rIgG_7.raw High VPPAINQFTQALDR IPI:IPI00299573.12 3 1 CID 46.01 5.03 1.00 1 3 523.95062 1569.83731 -0.72 39.22 9215 9215 MS2 28/52 Linfeng_081211_IgG_7.raw High AGVNTVTTLVENK IPI:IPI00299573.12 4 1 CID 54.47 4.25 1.00 1 2 673.36810 1345.72893 -2.45 31.35 6525 6525 MS2 19/24 Linfeng_081211_IgG_7.raw High TcTTVAFTQVNSEDK IPI:IPI00299573.12 3 1 CID C2(Carbamidomethyl) 76.94 3.94 1.00 1 2 850.89221 1700.77715 -1.47 28.43 5497 5497 MS2 19/28 Linfeng_081211_IgG_7.raw IPI:IPI00373877.3 582 65.6 5.15 Isoform 1 of Zinc finger protein 326 4.98 4 2 55.40 4.98 3 2 38.69 2.75 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ESVLTATSILNNPIVK IPI:IPI00373877.3 2 1 CID 68.69 4.46 1.00 1 2 849.98505 1698.96282 -0.52 41.15 9605 9605 MS2 15/30 Linfeng_081211_IgG_4.raw High ESVLTATSILNNPIVK 2 0 CID 16.96 4.41 1.00 1 3 566.99139 1698.95963 -2.40 41.44 4887 4887 MS2 20/60 Linfeng_091811_SIN3A_4.raw High NQGGSSWEAPYSR IPI:IPI00373877.3 1 1 CID 90.92 3.95 1.00 1 2 719.81976 1438.63225 -1.66 28.45 5728 5728 MS2 16/24 Linfeng_081211_IgG_3.raw High NQGGSSWEAPYSR IPI:IPI00373877.3 1 1 CID 47.11 3.52 1.00 1 2 719.81989 1438.63249 -1.49 27.59 5259 5259 MS2 12/24 Linfeng_081211_IgG_4.raw IPI:IPI00397611.2 211 24.3 11.55 24 kDa protein 5.21 3 1 33.31 5.21 3 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High STESLQANVQR IPI:IPI00465361.4 2 1 CID 50.94 4.27 1.00 1 2 616.81494 1232.62261 -0.32 21.47 3594 3594 MS2 16/20 Linfeng_081211_IgG_8.raw High STESLQANVQR IPI:IPI00465361.4 2 1 CID 31.73 3.84 1.00 1 2 616.81598 1232.62468 1.36 22.12 3573 3573 MS2 16/20 Linfeng_081211_IgG_7.raw High STESLQANVQR IPI:IPI00465361.4 2 1 CID 51.19 3.54 1.00 1 2 616.81586 1232.62444 1.16 21.76 3608 3608 MS2 16/20 Linfeng_081211_IgG_10.raw IPI:IPI00397904.6 819 93.4 5.72 Nuclear pore complex protein Nup93 5.01 4 3 56.10 5.01 3 3 13.22 1.34 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NLQEIQQAGER IPI:IPI00397904.6 1 1 CID 59.87 4.44 1.00 1 2 643.32745 1285.64763 -1.50 25.57 4836 4836 MS2 17/20 Linfeng_081211_IgG_3.raw High NLQEIQQAGER 1 0 CID 60.28 4.37 1.00 1 2 643.32678 1285.64629 -2.55 24.26 2584 2584 MS2 17/20 Linfeng_091811_SIN3A_3.raw High cGDLLAASQVVNR IPI:IPI00397904.6 2 1 CID C1(Carbamidomethyl) 47.21 4.05 1.00 1 2 701.85870 1402.71013 -0.47 32.75 7294 7294 MS2 17/24 Linfeng_081211_IgG_3.raw High LNQVcFDDDGTSSPQDR IPI:IPI00397904.6 2 1 CID C5(Carbamidomethyl) 67.59 4.05 1.00 1 2 977.41376 1953.82024 -2.13 29.01 5891 5891 MS2 17/32 Linfeng_081211_IgG_3.raw IPI:IPI00418471.6 466 53.6 5.12 Vimentin 7.30 3 3 67.10 7.30 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KVESLQEEIAFLK IPI:IPI00418471.6 2 1 CID 51.25 4.65 1.00 1 3 511.95508 1533.85068 -1.10 37.41 8423 8423 MS2 24/48 Linfeng_081211_IgG_5.raw High ILLAELEQLK IPI:IPI00418471.6 1 1 CID 54.50 4.00 1.00 1 2 585.36023 1169.71318 -0.75 40.70 9411 9411 MS2 16/18 Linfeng_081211_IgG_5.raw High EEAENTLQSFR IPI:IPI00418471.6 2 1 CID 48.80 3.53 1.00 1 2 662.31146 1323.61565 -1.47 29.43 5732 5732 MS2 15/20 Linfeng_081211_IgG_5.raw IPI:IPI00465022.9 1917 215.6 7.01 Isoform 2 of Structural maintenance of chromosomes flexible hinge domain-containing protein 1 3.55 6 5 85.85 2.19 3 3 75.23 1.36 2 2 66.53 0.78 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GSNEEDTDTPLFIGK 3 0 CID 37.22 4.27 1.00 1 2 811.87738 1622.74748 -4.32 33.11 3778 3778 MS2 16/28 Linfeng_091811_SIN3A_1.raw High AcVcQTLGISPEEK IPI:IPI00465022.9 2 1 CID "C2(Carbamidomethyl), C4(Carbamidomethyl)" 56.06 4.27 1.00 1 2 796.37451 1591.74175 -2.38 29.13 3142 3142 MS2 17/26 Linfeng_091611_rIgG_1.raw High ANLGVFSVFAPR IPI:IPI00465022.9 3 1 CID 27.81 4.10 1.00 1 2 639.35730 1277.70732 5.61 43.94 5081 5081 MS2 17/22 Linfeng_091611_rIgG_1.raw High TTFQENTQSISVR IPI:IPI00465022.9 3 1 CID 76.95 3.97 1.00 1 2 755.87762 1510.74797 -1.12 28.88 5389 5389 MS2 15/24 Linfeng_081211_IgG_2.raw High SLNSDISYFGVGGK IPI:IPI00465022.9 2 1 CID 59.17 3.95 1.00 1 2 722.35950 1443.71172 0.16 44.30 7465 7465 MS2 13/26 Linfeng_081211_IgG_1.raw High GSNEEDTDTPLFIGK IPI:IPI00465022.9 3 1 CID 73.44 3.73 1.00 1 2 811.88263 1622.75798 2.15 40.97 6510 6510 MS2 17/28 Linfeng_081211_IgG_1.raw IPI:IPI00479789.2 769 84.5 9.72 Isoform 1 of Uncharacterized protein C1orf103 6.24 4 3 34.96 6.24 3 3 20.65 1.95 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DTLQTVSSSPVTEISR IPI:IPI00479789.2 1 1 CID 58.57 4.47 1.00 1 2 860.43677 1719.86626 -5.66 33.21 7462 7462 MS2 15/30 Linfeng_081211_IgG_3.raw High VTSVGTGNFSSSVSK 1 0 CID 41.68 4.12 1.00 1 2 728.86523 1456.72319 -3.21 25.35 2736 2736 MS2 17/28 Linfeng_091811_SIN3A_3.raw High DSSFIVVNTQSLPVTVK IPI:IPI00479789.2 1 1 CID 31.67 3.91 1.00 1 2 917.50201 1833.99675 0.56 40.53 10032 10032 MS2 16/32 Linfeng_081211_IgG_3.raw High VTSVGTGNFSSSVSK IPI:IPI00479789.2 1 1 CID 46.97 3.89 1.00 1 2 728.86841 1456.72954 1.15 26.66 5201 5201 MS2 16/28 Linfeng_081211_IgG_3.raw IPI:IPI00641826.1 317 34.8 7.42 Isoform 2 of THO complex subunit 6 homolog 24.29 6 5 29.17 11.36 3 3 31.34 17.35 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLAAGNNYGQIAIFSLSSALSSEAK IPI:IPI00301252.2 3 1 CID 92.55 6.85 1.00 1 3 853.77386 2559.30704 -0.79 50.53 6006 6006 MS2 31/96 Linfeng_091811_SIN3A_6.raw High TSLEVPEINALLLVPK IPI:IPI00301252.2 3 1 CID 55.45 6.07 1.00 1 3 579.34412 1736.01780 -1.56 48.06 5702 5702 MS2 27/60 Linfeng_091811_SIN3A_6.raw High SPEVLSGGEDGAVR IPI:IPI00301252.2 3 1 CID 101.63 4.52 1.00 1 2 686.83643 1372.66557 -3.50 25.33 2754 2754 MS2 20/26 Linfeng_091811_SIN3A_6.raw High cVNQWQLSGELK IPI:IPI00641826.1 2 1 CID C1(Carbamidomethyl) 57.20 4.41 1.00 1 2 731.36115 1461.71501 -0.36 33.63 7352 7352 MS2 18/22 Linfeng_081211_IgG_6.raw High SPEVLSGGEDGAVR IPI:IPI00641826.1 3 1 CID 82.56 4.39 1.00 1 2 686.83856 1372.66985 -0.39 25.58 4775 4775 MS2 20/26 Linfeng_081211_IgG_6.raw High VDVFTNLGYR IPI:IPI00641826.1 3 1 CID 36.19 3.87 1.00 1 2 592.30878 1183.61028 -0.31 36.81 8423 8423 MS2 16/18 Linfeng_081211_IgG_6.raw IPI:IPI00644245.1 202 21.9 11.97 Chromosome 1 open reading frame 77 23.76 14 4 27.99 12.87 3 2 18.00 6.44 2 1 87.16 23.76 9 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GHLDAELDAYmAQTDPETND IPI:IPI00644245.1 4 1 CID M11(Oxidation) 135.30 5.76 1.00 1 2 1111.46033 2221.91338 -2.57 32.63 3518 3518 MS2 21/38 Linfeng_091811_SIN3A_7.raw High EQLDNQLDAYmSK IPI:IPI00644245.1 4 1 CID M11(Oxidation) 79.05 5.16 1.00 1 2 785.85413 1570.70098 -2.83 28.70 2990 2990 MS2 17/24 Linfeng_091811_SIN3A_7.raw High ASMQQQQQLASAR 4 0 CID 76.39 4.74 1.00 1 2 723.85931 1446.71135 -0.35 20.51 2042 2042 MS2 18/24 Linfeng_091611_rIgG_7.raw High EQLDNQLDAYMSK IPI:IPI00644245.1 4 1 CID 76.99 4.74 1.00 1 2 777.85632 1554.70537 -3.31 33.97 3690 3690 MS2 19/24 Linfeng_091811_SIN3A_7.raw High TKGHLDAELDAYmAQTDPETND IPI:IPI00644245.1 4 1 CID M13(Oxidation) 34.18 4.72 1.00 1 3 817.68903 2451.05252 -3.76 30.00 3166 3166 MS2 25/84 Linfeng_091811_SIN3A_7.raw High ASmQQQQQLASAR IPI:IPI00644245.1 4 1 CID M3(Oxidation) 74.96 4.62 1.00 1 2 731.85706 1462.70683 0.05 13.55 1060 1060 MS2 19/24 Linfeng_091811_SIN3A_7.raw High ASMQQQQQLASAR IPI:IPI00644245.1 4 1 CID 74.71 4.48 1.00 1 2 723.85760 1446.70793 -2.71 20.46 1857 1857 MS2 18/24 Linfeng_091811_SIN3A_7.raw High ASmQQQQQLASAR IPI:IPI00644245.1 4 1 CID M3(Oxidation) 76.24 4.44 1.00 1 2 731.85675 1462.70622 -0.37 14.57 1151 1151 MS2 19/24 Linfeng_091811_SIN3A_7.raw High ASmQQQQQLASAR 4 0 CID M3(Oxidation) 81.27 4.36 1.00 1 2 731.85675 1462.70622 -0.37 17.46 1609 1609 MS2 18/24 Linfeng_091611_rIgG_7.raw High ASmQQQQQLASAR IPI:IPI00644245.1 4 1 CID M3(Oxidation) 68.62 4.36 1.00 1 2 731.85632 1462.70537 -0.95 4.26 454 454 MS2 15/24 Linfeng_091811_SIN3A_7.raw High EQLDNQLDAYMSK 4 0 CID 61.04 4.08 1.00 1 2 777.85876 1554.71025 -0.17 34.25 7566 7566 MS2 13/24 Linfeng_081211_IgG_7.raw High ASmQQQQQLASAR IPI:IPI00644245.1 4 1 CID M3(Oxidation) 59.53 4.07 1.00 1 2 731.85797 1462.70867 1.30 12.54 979 979 MS2 18/24 Linfeng_091811_SIN3A_7.raw High ASmQQQQQLASAR 4 0 CID M3(Oxidation) 66.85 3.74 1.00 1 2 731.85767 1462.70806 0.88 18.70 2492 2492 MS2 14/24 Linfeng_081211_IgG_7.raw High ASMQQQQQLASAR 4 0 CID 52.63 3.54 1.00 1 2 723.86322 1446.71916 5.05 21.60 3412 3412 MS2 15/24 Linfeng_081211_IgG_7.raw IPI:IPI00646774.1 528 51.4 8.35 51 kDa protein 3.41 3 1 26.46 3.41 3 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GSPGVPSFAAGPPISEGK IPI:IPI00646774.1 7 1 CID 27.00 4.33 1.00 1 2 827.92444 1654.84160 -1.22 33.38 7455 7455 MS2 14/34 Linfeng_081211_IgG_8.raw High GSPGVPSFAAGPPISEGK IPI:IPI00646774.1 7 1 CID 116.24 3.66 1.00 1 2 827.92468 1654.84209 -0.92 33.55 7321 7321 MS2 18/34 Linfeng_081211_IgG_6.raw High GSPGVPSFAAGPPISEGK IPI:IPI00646774.1 7 1 CID 46.61 3.58 1.00 1 2 827.92560 1654.84392 0.19 33.71 7366 7366 MS2 17/34 Linfeng_081211_IgG_7.raw IPI:IPI00719549.2 339 37.0 8.48 Transcriptional coactivator CoAZ 9.44 4 2 26.06 9.44 3 2 5.92 4.72 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IFVGNVSAAcTSQELR 7 0 CID C10(Carbamidomethyl) 94.32 5.92 1.00 1 2 876.43890 1751.87053 -2.31 31.90 3710 3710 MS2 25/30 Linfeng_091611_rIgG_4.raw High VADLTEQYNEQYGAVR IPI:IPI00719549.2 2 1 CID 101.72 5.22 1.00 1 2 928.44403 1855.88078 -0.73 30.76 6377 6377 MS2 18/30 Linfeng_081211_IgG_6.raw High IFVGNVSAAcTSQELR IPI:IPI00013174.2;IPI:IPI00719549.2 7 2 CID C10(Carbamidomethyl) 25.15 4.91 1.00 1 3 584.63025 1751.87619 0.92 32.24 6806 6806 MS2 21/60 Linfeng_081211_IgG_4.raw High IFVGNVSAAcTSQELR IPI:IPI00013174.2;IPI:IPI00719549.2 7 2 CID C10(Carbamidomethyl) 65.33 4.12 1.00 1 2 876.44122 1751.87517 0.34 32.21 6795 6795 MS2 18/30 Linfeng_081211_IgG_4.raw IPI:IPI00760588.2 931 103.6 8.66 Isoform 5 of Double-stranded RNA-specific adenosine deaminase 5.16 3 3 73.74 5.16 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TAESQTPTPSATSFFSGK IPI:IPI00760588.2 5 1 CID 113.45 5.69 1.00 1 2 922.43976 1843.87224 0.72 34.59 7986 7986 MS2 18/34 Linfeng_081211_IgG_3.raw High mGFTEVTPVTGASLR IPI:IPI00760588.2 3 1 CID M1(Oxidation) 65.38 4.70 1.00 1 2 791.39954 1581.79180 -1.52 33.88 7713 7713 MS2 16/28 Linfeng_081211_IgG_3.raw High YLNTNPVGGLLEYAR IPI:IPI00760588.2 5 1 CID 41.32 4.55 1.00 1 2 840.44305 1679.87883 2.16 42.98 10865 10865 MS2 17/28 Linfeng_081211_IgG_3.raw IPI:IPI00783594.3 268 30.3 11.85 Isoform 3 of RNA-binding protein with serine-rich domain 1 5.60 4 1 24.30 5.60 3 1 8.13 5.60 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GYAYVEFENPDEAEK IPI:IPI00783594.3 3 1 CID 90.44 5.27 1.00 1 2 880.88715 1760.76702 1.12 33.65 7361 7361 MS2 19/28 Linfeng_081211_IgG_6.raw High GYAYVEFENPDEAEK IPI:IPI00783594.3 3 1 CID 63.50 5.08 1.00 1 2 880.88605 1760.76482 -0.13 33.61 7219 7219 MS2 20/28 Linfeng_081211_IgG_5.raw High GYAYVEFENPDEAEK IPI:IPI00783594.3 3 1 CID 65.78 4.83 1.00 1 2 880.88727 1760.76726 1.25 33.76 7386 7386 MS2 16/28 Linfeng_081211_IgG_7.raw High GYAYVEFENPDEAEK 3 0 CID 70.35 4.37 1.00 1 2 880.88403 1760.76079 -2.42 33.40 3850 3850 MS2 16/28 Linfeng_091611_rIgG_6.raw IPI:IPI00789302.1 218 25.0 5.14 25 kDa protein 12.84 5 2 17.69 4.59 3 1 14.16 8.26 2 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DAINAETVLVLVNAVYFK IPI:IPI00789302.1 3 1 CID 57.33 5.17 1.00 1 3 660.36749 1979.08792 1.53 54.98 6335 6335 MS2 24/68 Linfeng_091611_rIgG_9.raw High DAINAETVLVLVNAVYFK IPI:IPI00789302.1 3 1 CID 39.01 4.78 1.00 1 3 660.36731 1979.08738 1.26 55.01 6435 6435 MS2 21/68 Linfeng_091611_rIgG_7.raw High TDYTLSIANR IPI:IPI00789302.1 3 1 CID 63.67 3.86 1.00 1 2 577.29584 1153.58440 -0.36 30.54 6233 6233 MS2 15/18 Linfeng_081211_IgG_7.raw High TDYTLSIANR IPI:IPI00789302.1 3 1 CID 48.54 3.77 1.00 1 2 577.29651 1153.58574 0.81 30.46 6210 6210 MS2 15/18 Linfeng_081211_IgG_4.raw High TDYTLSIANR IPI:IPI00789302.1 3 1 CID 48.91 3.51 1.00 1 2 577.29510 1153.58293 -1.63 31.21 6706 6706 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00794746.1 208 24.4 10.67 Putative uncharacterized protein RPL7 29.81 4 4 48.33 21.15 3 3 35.12 8.65 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YGIIcMEDLIHEIYTVGK IPI:IPI00794746.1 4 1 CID C5(Carbamidomethyl) 77.28 4.71 1.00 1 3 718.69281 2154.06388 1.31 50.67 5960 5960 MS2 29/68 Linfeng_091611_rIgG_7.raw High TTHFVEGGDAGNREDQINR IPI:IPI00794746.1 4 1 CID 54.90 4.47 1.00 1 4 529.75092 2115.98183 0.71 22.12 3570 3570 MS2 34/108 Linfeng_081211_IgG_7.raw High IVEPYIAWGYPNLK IPI:IPI00794746.1 4 1 CID 77.58 4.39 1.00 1 2 831.95093 1662.89458 3.32 42.08 10174 10174 MS2 17/26 Linfeng_081211_IgG_7.raw High AGNFYVPAEPK IPI:IPI00794746.1 6 1 CID 23.16 3.46 1.00 1 2 596.80280 1192.59831 -1.21 29.67 5935 5935 MS2 14/20 Linfeng_081211_IgG_7.raw IPI:IPI00795751.1 91 9.7 11.49 Putative uncharacterized protein RPL23 38.46 6 2 19.35 38.46 3 2 6.61 16.48 1 1 16.57 38.46 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISLGLPVGAVINcADNTGAK IPI:IPI00795751.1 5 1 CID C13(Carbamidomethyl) 99.71 5.71 1.00 1 3 657.35211 1970.04178 2.10 40.62 9642 9642 MS2 31/76 Linfeng_081211_IgG_10.raw High ISLGLPVGAVINcADNTGAK 5 0 CID C13(Carbamidomethyl) 75.13 5.49 1.00 1 3 657.34814 1970.02988 -3.94 41.13 4637 4637 MS2 32/76 Linfeng_091811_SIN3A_10.raw High ISLGLPVGAVINcADNTGAK IPI:IPI00795751.1 5 1 CID C13(Carbamidomethyl) 123.70 4.94 1.00 1 2 985.52478 1970.04228 2.35 40.56 9618 9618 MS2 19/38 Linfeng_081211_IgG_10.raw High LPAAGVGDmVmATVK 5 0 CID "M9(Oxidation), M11(Oxidation)" 74.33 4.83 1.00 1 2 746.37903 1491.75078 -2.61 28.05 2926 2926 MS2 23/28 Linfeng_091811_SIN3A_10.raw High LPAAGVGDmVmATVK 5 0 CID "M9(Oxidation), M11(Oxidation)" 73.30 4.39 1.00 1 2 746.38019 1491.75310 -1.05 27.66 2738 2738 MS2 23/28 Linfeng_091611_rIgG_10.raw High LPAAGVGDmVmATVK IPI:IPI00795751.1 5 1 CID "M9(Oxidation), M11(Oxidation)" 64.94 4.24 1.00 1 2 746.38080 1491.75432 -0.24 28.09 5485 5485 MS2 18/28 Linfeng_081211_IgG_10.raw IPI:IPI00829912.2 117 12.8 6.51 Ig kappa chain V-I region HK102 (Fragment) 13.68 3 1 46.35 13.68 3 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLIYDASSLESGVPSR IPI:IPI00829912.2 2 1 CID 58.19 5.13 1.00 1 2 853.94934 1706.89141 -2.70 38.49 9102 9102 MS2 15/30 Linfeng_081211_IgG_8.raw High LLIYDASSLESGVPSR IPI:IPI00829912.2 2 1 CID 43.46 4.68 1.00 1 2 853.95129 1706.89531 -0.41 38.51 8896 8896 MS2 13/30 Linfeng_081211_IgG_10.raw High LLIYDASSLESGVPSR IPI:IPI00829912.2 2 1 CID 62.18 4.27 1.00 1 2 853.95032 1706.89336 -1.55 37.44 8773 8773 MS2 19/30 Linfeng_081211_IgG_8.raw IPI:IPI00879819.1 600 67.6 5.35 Lamin-B2 6.00 4 3 110.38 6.00 3 3 75.29 2.33 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVLVNADGEEVAmR IPI:IPI00879819.1 2 1 CID M13(Oxidation) 78.37 4.60 1.00 1 2 760.37329 1519.73931 -1.89 27.08 5113 5113 MS2 21/26 Linfeng_081211_IgG_4.raw High LESLSYQLSGLQK IPI:IPI00879819.1 2 1 CID 65.10 4.57 1.00 1 2 733.39941 1465.79155 1.24 35.11 7733 7733 MS2 19/24 Linfeng_081211_IgG_4.raw High TVLVNADGEEVAMR 2 0 CID 63.47 4.26 1.00 1 2 752.37494 1503.74260 -3.10 30.12 3475 3475 MS2 17/26 Linfeng_091611_rIgG_4.raw High mAQALEELR IPI:IPI00879819.1 2 1 CID M1(Oxidation) 36.43 3.56 1.00 1 2 538.77319 1076.53911 -1.32 27.07 5108 5108 MS2 15/16 Linfeng_081211_IgG_4.raw IPI:IPI00894044.3 682 76.4 6.64 SUN domain-containing protein 1 isoform c 12.17 4 4 28.01 9.53 3 3 7.27 2.64 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QLPTSEAVVSAVSEAGASGITEAQAR IPI:IPI00894044.3 7 1 CID 98.62 5.15 1.00 1 3 843.76514 2529.28086 0.64 41.61 10402 10402 MS2 25/100 Linfeng_081211_IgG_3.raw High LLFSEDQQGGSLEQLLQR IPI:IPI00879038.1 8 1 CID 11.20 5.07 1.00 1 3 687.69000 2061.05545 -2.79 43.92 4644 4644 MS2 21/68 Linfeng_091611_rIgG_3.raw High LATTAcTLGDGEAVGADSGTSSAVSLK IPI:IPI00894044.3 15 1 CID C6(Carbamidomethyl) 12.20 4.25 1.00 1 3 847.07794 2539.21927 -0.02 32.71 7280 7280 MS2 22/104 Linfeng_081211_IgG_3.raw High TGcETVDAVQER IPI:IPI00894044.3 8 1 CID C3(Carbamidomethyl) 69.49 4.12 1.00 1 2 682.80774 1364.60820 -2.15 23.06 3996 3996 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00895860.1 1802 195.9 5.20 Isoform 3 of Mediator of DNA damage checkpoint protein 1 9.88 17 8 80.87 2.05 3 2 68.23 4.77 7 4 66.72 7.82 7 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AHEVGAQGGPPVAQVEQDLPISR IPI:IPI00937211.1 9 1 CID 131.41 6.94 1.00 1 3 785.73749 2355.19791 -3.13 34.14 3912 3912 MS2 39/88 Linfeng_091811_SIN3A_1.raw High AHEVGAQGGPPVAQVEQDLPISR 9 0 CID 130.38 6.91 1.00 1 3 785.73706 2355.19663 -3.67 33.95 3772 3772 MS2 37/88 Linfeng_091611_rIgG_1.raw High VGLPLLSPEFLLTGVLK IPI:IPI00937211.1 9 1 CID 78.53 5.72 1.00 1 3 599.36957 1796.09415 0.48 54.87 6476 6476 MS2 29/64 Linfeng_091811_SIN3A_1.raw High VGLPLLSPEFLLTGVLK 9 0 CID 91.22 5.70 1.00 1 3 599.36981 1796.09488 0.89 54.85 6432 6432 MS2 29/64 Linfeng_091611_rIgG_1.raw High LEPSTSTDQPVTPEPTSQATR IPI:IPI00937211.1 8 1 CID 20.71 5.57 1.00 1 3 748.03082 2242.07792 -2.47 24.69 2648 2648 MS2 23/80 Linfeng_091811_SIN3A_1.raw High ENLTDLVVDTDTLGESTQPQR IPI:IPI00937211.1 9 1 CID 23.69 5.53 1.00 1 3 777.71167 2331.12046 -4.58 40.76 4777 4777 MS2 26/80 Linfeng_091811_SIN3A_1.raw High TPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSK IPI:IPI00937211.1 8 1 CID 80.93 5.50 1.00 1 4 874.18420 3493.71499 -5.29 35.79 4129 4129 MS2 42/198 Linfeng_091811_SIN3A_1.raw High TPEPVVPTAPEPHPTTSTDQPVTPK 8 0 CID 57.31 5.20 1.00 1 3 875.11090 2623.31815 -2.65 27.58 2939 2939 MS2 26/96 Linfeng_091611_rIgG_1.raw High TPEPVVPTAPEPHPTTSTDQPVTPK IPI:IPI00937211.1 8 1 CID 62.43 5.08 1.00 1 3 875.10931 2623.31339 -4.46 27.74 3057 3057 MS2 25/96 Linfeng_091811_SIN3A_1.raw High SQLPAEGDAGAEWAAAVLK IPI:IPI00895860.1 9 1 CID 81.67 5.02 1.00 1 3 628.65527 1883.95127 0.74 47.84 8487 8487 MS2 30/72 Linfeng_081211_IgG_1.raw High LEPSTSTDQPVTPEPTSQATR 8 0 CID 46.58 5.01 1.00 1 3 748.03052 2242.07700 -2.88 24.69 2554 2554 MS2 27/80 Linfeng_091611_rIgG_1.raw High VGLPLLSPEFLLTGVLK 9 0 CID 80.89 4.72 1.00 1 3 599.37195 1796.10129 4.46 54.86 6345 6345 MS2 25/64 Linfeng_091611_rIgG_2.raw High LEPSTSTDQPVTPEPTSQATR 8 0 CID 13.11 4.55 1.00 1 3 748.02985 2242.07499 -3.78 24.82 2567 2567 MS2 20/80 Linfeng_091611_rIgG_2.raw High SQLPAEGDAGAEWAAAVLK IPI:IPI00895860.1 9 1 CID 90.84 4.45 1.00 1 2 942.47723 1883.94719 -1.43 47.82 8483 8483 MS2 21/36 Linfeng_081211_IgG_1.raw High VGLPLLSPEFLLTGVLK IPI:IPI00937211.1 9 1 CID 132.81 4.22 1.00 1 2 898.55090 1796.09453 0.70 54.86 6475 6475 MS2 17/32 Linfeng_091811_SIN3A_1.raw High VGLPLLSPEFLLTGVLK 9 0 CID 118.45 4.19 1.00 1 2 898.55170 1796.09612 1.58 54.83 6429 6429 MS2 21/32 Linfeng_091611_rIgG_1.raw High TPESIVPIAPELQPSTSR IPI:IPI00895860.1 7 1 CID 27.65 3.84 1.00 1 2 961.51447 1922.02165 -0.71 44.06 7387 7387 MS2 15/34 Linfeng_081211_IgG_1.raw IPI:IPI00903057.1 800 93.2 9.50 "cDNA FLJ46571 fis, clone THYMU3041428, highly similar to Probable ATP-dependent RNA helicase DDX23" 4.38 3 3 47.66 4.38 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELAQQIEEETIK IPI:IPI00903057.1 2 1 CID 36.47 4.01 1.00 1 2 715.87317 1430.73906 1.17 34.30 7875 7875 MS2 15/22 Linfeng_081211_IgG_3.raw High DILVATDVAGR IPI:IPI00903057.1 2 1 CID 26.12 3.89 1.00 1 2 565.31360 1129.61992 -1.16 33.20 7460 7460 MS2 16/20 Linfeng_081211_IgG_3.raw High DIIGVAETGSGK IPI:IPI00903057.1 2 1 CID 33.24 3.85 1.00 1 2 573.80243 1146.59758 -2.25 30.60 6499 6499 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00909122.1 578 66.5 6.38 poly(A)-specific ribonuclease PARN isoform 2 6.40 3 3 42.40 6.40 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DIINNTSLAELEK IPI:IPI00909122.1 3 1 CID 41.49 5.03 1.00 1 2 730.38489 1459.76250 -0.98 37.47 9003 9003 MS2 18/24 Linfeng_081211_IgG_3.raw High EQEELNDAVGFSR IPI:IPI00909122.1 3 1 CID 59.70 4.27 1.00 1 2 747.34882 1493.69036 2.41 31.40 6780 6780 MS2 15/24 Linfeng_081211_IgG_3.raw High IEDLLQSEENK IPI:IPI00909122.1 3 1 CID 75.73 4.07 1.00 1 2 659.32910 1317.65093 -1.81 31.19 6698 6698 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00909890.1 429 44.8 9.00 "cDNA FLJ58049, highly similar to RNA-binding protein FUS" 16.78 10 4 41.30 3.73 3 2 38.60 16.78 4 4 33.51 9.32 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HDSEQDNSDNNTIFVQGLGENVTIESVADYFK IPI:IPI00909890.1 5 1 CID 133.84 7.08 1.00 1 3 1195.87830 3585.62033 -1.40 48.32 5819 5819 MS2 29/124 Linfeng_091611_rIgG_4.raw High LKGEATVSFDDPPSAK IPI:IPI00909890.1 7 1 CID 76.98 5.65 1.00 1 3 554.61414 1661.82785 -6.21 25.59 2864 2864 MS2 33/60 Linfeng_091611_rIgG_4.raw High LKGEATVSFDDPPSAK 7 0 CID 51.91 5.44 1.00 1 3 554.61334 1661.82547 -7.65 26.06 2870 2870 MS2 32/60 Linfeng_091811_SIN3A_4.raw High GEATVSFDDPPSAK 9 0 CID 91.06 4.92 1.00 1 2 710.82831 1420.64934 -6.90 27.10 3011 3011 MS2 20/26 Linfeng_091811_SIN3A_4.raw High APKPDGPGGGPGGSHmGGNYGDDR 5 0 CID M16(Oxidation) 56.14 4.90 1.00 1 4 567.99603 2268.96230 -2.87 17.30 1633 1633 MS2 40/138 Linfeng_091811_SIN3A_4.raw High GEATVSFDDPPSAK IPI:IPI00020194.1;IPI:IPI00909890.1 9 2 CID 89.78 4.80 1.00 1 2 710.82727 1420.64726 -8.36 26.80 3026 3026 MS2 20/26 Linfeng_091611_rIgG_4.raw High LKGEATVSFDDPPSAK 7 0 CID 22.19 4.63 1.00 1 3 554.61707 1661.83664 -0.93 26.46 4978 4978 MS2 24/60 Linfeng_081211_IgG_4.raw High APKPDGPGGGPGGSHmGGNYGDDR IPI:IPI00909890.1 5 1 CID M16(Oxidation) 90.50 4.57 1.00 1 4 567.99609 2268.96255 -2.76 16.93 1648 1648 MS2 42/138 Linfeng_091611_rIgG_4.raw High GEATVSFDDPPSAK 9 0 CID 84.59 4.49 1.00 1 2 710.83289 1420.65849 -0.46 27.89 5182 5182 MS2 19/26 Linfeng_081211_IgG_5.raw High GEATVSFDDPPSAK 9 0 CID 57.20 4.47 1.00 1 2 710.83276 1420.65825 -0.63 27.56 5248 5248 MS2 16/26 Linfeng_081211_IgG_4.raw IPI:IPI00915274.1 509 57.0 9.47 h/ACA ribonucleoprotein complex subunit 4 isoform 2 10.61 4 4 76.35 7.07 3 3 53.60 3.54 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AGLESGAEPGDGDSDTTK IPI:IPI00915274.1 4 1 CID 40.18 4.50 1.00 1 2 853.86884 1706.73039 -2.84 20.65 2173 2173 MS2 18/34 Linfeng_091611_rIgG_4.raw High DSAVNAIcYGAK IPI:IPI00915274.1 4 1 CID C8(Carbamidomethyl) 75.78 4.18 1.00 1 2 634.79950 1268.59172 -1.81 27.54 5301 5301 MS2 17/22 Linfeng_081211_IgG_6.raw High LHNAIEGGTQLSR IPI:IPI00915274.1 7 1 CID 68.18 4.13 1.00 1 2 698.36914 1395.73100 -2.12 23.04 3731 3731 MS2 21/24 Linfeng_081211_IgG_5.raw High LDTSQWPLLLK IPI:IPI00915274.1 7 1 CID 56.26 4.09 1.00 1 2 657.37817 1313.74907 2.02 43.35 10092 10092 MS2 14/20 Linfeng_081211_IgG_5.raw IPI:IPI00915960.1 2248 252.0 5.64 "HCG1994636, isoform CRA_b" 1.16 3 2 49.04 1.16 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIDDSDSNLSVVK IPI:IPI00915960.1 7 1 CID 71.16 3.97 3 2 702.86365 1404.72002 -1.22 30.31 6392 6392 MS2 19/24 Linfeng_081211_IgG_3.raw High IIDDSDSNLSVVK IPI:IPI00915960.1 7 1 CID 30.21 3.89 3 2 702.86487 1404.72246 0.52 30.47 5879 5879 MS2 14/24 Linfeng_081211_IgG_2.raw High YIASVQGSTPSPR IPI:IPI00915960.1 4 1 CID 37.76 3.64 1.00 1 2 681.85370 1362.70012 -0.83 25.56 4468 4468 MS2 14/24 Linfeng_081211_IgG_2.raw IPI:IPI00916802.1 361 41.8 5.96 SS-B/La protein 6.93 3 2 35.77 6.93 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LTTDFNVIVEALSK IPI:IPI00916802.1 5 1 CID 72.75 3.98 1.00 1 2 775.42749 1549.84770 0.28 48.01 11314 11314 MS2 18/26 Linfeng_081211_IgG_5.raw High IIEDQQESLNK IPI:IPI00916802.1 2 1 CID 70.87 3.92 1.00 1 2 658.83685 1316.66643 -2.17 22.78 3649 3649 MS2 17/20 Linfeng_081211_IgG_5.raw High IIEDQQESLNK IPI:IPI00916802.1 2 1 CID 31.63 3.66 1.00 1 2 658.83710 1316.66692 -1.80 22.28 3805 3805 MS2 13/20 Linfeng_081211_IgG_6.raw IPI:IPI00925339.1 396 44.1 7.46 Protein 8.84 4 3 24.27 6.31 3 2 9.55 2.53 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VANVSAAEDSVSQR IPI:IPI00926269.1 5 1 CID 77.74 5.02 1.00 1 2 716.85352 1432.69975 -2.08 23.94 4025 4025 MS2 21/26 Linfeng_081211_IgG_5.raw High VANVSAAEDSVSQR IPI:IPI00926269.1 5 1 CID 64.22 4.64 1.00 1 2 716.85352 1432.69975 -2.08 23.70 4245 4245 MS2 19/26 Linfeng_081211_IgG_6.raw High IEELLSGENR IPI:IPI00924551.1 4 1 CID 63.55 4.21 1.00 1 2 580.29907 1159.59087 -3.91 27.52 3124 3124 MS2 17/18 Linfeng_091611_rIgG_4.raw High ELILHNPVTLK IPI:IPI00926269.1 4 1 CID 17.80 3.48 1.00 1 2 638.88300 1276.75871 -2.89 32.67 6869 6869 MS2 13/20 Linfeng_081211_IgG_5.raw IPI:IPI00930678.1 108 12.4 9.89 small nuclear ribonucleoprotein Sm D2 isoform 2 36.11 5 3 27.12 18.52 3 2 15.97 17.59 1 1 25.22 17.59 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High REEEEFNTGPLSVLTQSVK IPI:IPI00930678.1 3 1 CID 50.60 6.92 1.00 1 3 721.70062 2163.08731 -2.58 39.80 4465 4465 MS2 27/72 Linfeng_091811_SIN3A_10.raw High REEEEFNTGPLSVLTQSVK 3 0 CID 62.17 6.38 1.00 1 3 721.70154 2163.09006 -1.31 39.50 4244 4244 MS2 28/72 Linfeng_091611_rIgG_10.raw High HcNMVLENVK IPI:IPI00930678.1 4 1 CID C2(Carbamidomethyl) 29.22 3.82 1.00 1 2 622.29962 1243.59197 -0.22 24.42 4421 4421 MS2 15/18 Linfeng_081211_IgG_10.raw High NNTQVLINcR IPI:IPI00930678.1 4 1 CID C9(Carbamidomethyl) 57.40 3.53 1.00 1 2 616.31372 1231.62016 -0.86 24.91 4586 4586 MS2 15/18 Linfeng_081211_IgG_10.raw High HcNmVLENVK IPI:IPI00930678.1 4 1 CID "C2(Carbamidomethyl), M4(Oxidation)" 37.37 3.47 1.00 1 2 630.29651 1259.58574 -1.13 20.60 3239 3239 MS2 14/18 Linfeng_081211_IgG_10.raw IPI:IPI00937477.1 677 74.8 5.57 WD repeat-containing protein 43 19.50 10 7 65.32 5.91 3 3 56.07 6.20 2 2 86.66 13.29 5 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GKEDLQTNSFPVLLTQGLESNDFEmLNK IPI:IPI00937477.1 1 1 CID M25(Oxidation) 138.41 9.06 1.00 1 3 1061.85437 3183.54856 -0.95 44.94 5313 5313 MS2 35/108 Linfeng_091811_SIN3A_3.raw High SEAVGMSNQTDLLALGTAVGSILLYSTVK IPI:IPI00937477.1 1 1 CID 97.27 6.76 1.00 1 3 980.18671 2938.54557 0.43 55.29 6032 6032 MS2 32/112 Linfeng_091611_rIgG_3.raw High VNcIQWHQDSGcLYScSDDK IPI:IPI00937477.1 2 1 CID "C3(Carbamidomethyl), C12(Carbamidomethyl), C16(Carbamidomethyl)" 87.20 6.70 1.00 1 3 824.67010 2471.99576 -2.27 29.82 3354 3354 MS2 27/76 Linfeng_091811_SIN3A_3.raw High LILLITQVTASEK IPI:IPI00937477.1 2 1 CID 80.80 5.18 1.00 1 2 714.93494 1428.86260 -3.27 40.98 4270 4270 MS2 20/24 Linfeng_091611_rIgG_3.raw High GDNSSVSSLcISPDGK IPI:IPI00937477.1 2 1 CID C10(Carbamidomethyl) 64.59 4.95 1.00 1 2 811.86841 1622.72954 -1.96 28.99 3239 3239 MS2 16/30 Linfeng_091811_SIN3A_3.raw High GDNSSVSSLcISPDGK IPI:IPI00937477.1 2 1 CID C10(Carbamidomethyl) 79.38 4.78 1.00 1 2 811.86823 1622.72917 -2.18 30.13 6319 6319 MS2 17/30 Linfeng_081211_IgG_3.raw High MPLHTIIPLLQELTK IPI:IPI00937477.1 2 1 CID 81.62 4.62 1.00 1 3 583.00958 1747.01419 -2.59 47.13 5591 5591 MS2 27/56 Linfeng_091811_SIN3A_3.raw High SGGNEVSIEER IPI:IPI00937477.1 1 1 CID 61.35 4.30 1.00 1 2 588.77649 1176.54570 -2.96 21.14 2148 2148 MS2 17/20 Linfeng_091811_SIN3A_3.raw High SGGNEVSIEER IPI:IPI00937477.1 1 1 CID 59.40 4.26 1.00 1 2 588.77740 1176.54753 -1.40 22.97 3964 3964 MS2 16/20 Linfeng_081211_IgG_3.raw High LILLITQVTASEK IPI:IPI00937477.1 2 1 CID 42.03 3.63 1.00 1 2 714.93872 1428.87016 2.03 41.33 9656 9656 MS2 16/24 Linfeng_081211_IgG_4.raw IPI:IPI00942884.1 324 36.6 9.61 HRB2 variant B 11.73 3 3 26.40 11.73 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GLLEESSFATLFPK IPI:IPI00942884.1 2 1 CID 59.76 4.54 1.00 1 2 769.90826 1538.80925 -0.59 45.28 10617 10617 MS2 17/26 Linfeng_081211_IgG_5.raw High ILQDDVAcDIIK IPI:IPI00942884.1 2 1 CID C8(Carbamidomethyl) 54.83 3.81 1.00 1 2 701.86536 1402.72344 -0.91 34.94 7689 7689 MS2 15/22 Linfeng_081211_IgG_5.raw High LGALTAEEIALK IPI:IPI00942884.1 3 1 CID 32.36 3.60 1.00 1 2 614.86035 1228.71343 -1.12 35.22 7795 7795 MS2 18/22 Linfeng_081211_IgG_5.raw IPI:IPI00953417.1 243 27.4 4.49 "cDNA FLJ53012, highly similar to Tubulin beta-7 chain" 42.80 12 6 22.73 12.35 3 2 17.90 14.40 2 2 44.92 37.86 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGPFGQIFRPDNFVFGQSGAGNNWAK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 107.08 5.90 1.00 1 3 933.45209 2798.34171 -0.64 43.94 5367 5367 MS2 31/100 Linfeng_091811_SIN3A_5.raw High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 70.71 5.36 1.00 1 3 629.32684 1885.96598 -3.67 45.83 5608 5608 MS2 31/64 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR 11 0 CID 44.35 5.29 1.00 1 3 653.66309 1958.97470 -3.66 44.42 5287 5287 MS2 25/68 Linfeng_091611_rIgG_5.raw High MAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID 93.34 5.18 1.00 1 3 623.99597 1869.97336 -2.48 47.82 5856 5856 MS2 37/64 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00645452.1 11 1 CID 59.62 5.09 1.00 1 3 653.66589 1958.98313 0.64 45.32 10630 10630 MS2 25/68 Linfeng_081211_IgG_5.raw High NSSYFVEWIPNNVK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 22 3 CID 49.93 4.63 1.00 1 2 848.91589 1696.82451 -5.00 41.12 4998 4998 MS2 13/26 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 44.89 4.63 1.00 1 3 653.66254 1958.97306 -4.50 44.71 5466 5466 MS2 26/68 Linfeng_091811_SIN3A_5.raw High MAVTFIGNSTAIQELFK 5 0 CID 65.95 4.62 1.00 1 3 623.99622 1869.97409 -2.08 47.47 5666 5666 MS2 35/64 Linfeng_091611_rIgG_5.raw High EIVHIQAGQcGNQIGAK IPI:IPI00908770.1;IPI:IPI00953417.1 6 2 CID C10(Carbamidomethyl) 55.61 4.40 1.00 1 3 608.31006 1822.91562 -4.01 25.70 2919 2919 MS2 29/64 Linfeng_091811_SIN3A_5.raw High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 48.31 4.28 1.00 1 3 629.32849 1885.97092 -1.05 45.97 5440 5440 MS2 22/64 Linfeng_091811_SIN3A_6.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 67.87 4.26 1.00 1 2 651.32098 1301.63469 -1.96 27.45 5277 5277 MS2 18/22 Linfeng_081211_IgG_6.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 80.21 3.89 1.00 1 2 651.32062 1301.63396 -2.52 27.67 5110 5110 MS2 16/22 Linfeng_081211_IgG_5.raw IPI:IPI00965414.1 63 7.0 8.22 Truncated beta-globin 20.63 7 1 21.23 20.63 3 1 17.77 20.63 4 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VNVDEVGGEALGR 4 0 CID 43.94 4.61 1.00 1 2 657.83459 1314.66191 -2.27 29.38 3175 3175 MS2 19/24 Linfeng_091611_rIgG_9.raw High VNVDEVGGEALGR 4 0 CID 61.37 4.61 1.00 1 2 657.83502 1314.66277 -1.62 29.23 3155 3155 MS2 19/24 Linfeng_091611_rIgG_1.raw High VNVDEVGGEALGR 4 0 CID 53.83 4.45 1.00 1 2 657.83417 1314.66106 -2.92 29.22 2776 2776 MS2 18/24 Linfeng_091611_rIgG_3.raw High VNVDEVGGEALGR IPI:IPI00965414.1 4 1 CID 49.83 4.37 1.00 1 2 657.83594 1314.66460 -0.23 29.75 6042 6042 MS2 19/24 Linfeng_081211_IgG_10.raw High VNVDEVGGEALGR IPI:IPI00965414.1 4 1 CID 37.64 4.22 1.00 1 2 657.83624 1314.66521 0.23 30.95 6013 6013 MS2 15/24 Linfeng_081211_IgG_2.raw High VNVDEVGGEALGR IPI:IPI00965414.1 4 1 CID 55.31 4.19 1.00 1 2 657.83655 1314.66582 0.70 29.82 5995 5995 MS2 19/24 Linfeng_081211_IgG_4.raw High VNVDEVGGEALGR 4 0 CID 47.13 4.11 1.00 1 2 657.83466 1314.66203 -2.18 29.31 2954 2954 MS2 17/24 Linfeng_091611_rIgG_10.raw IPI:IPI00966492.1 65 7.4 9.00 Putative uncharacterized protein UTP15 46.15 3 2 13.21 46.15 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VDFSPQPPYNYAVTASSR IPI:IPI00966492.1 3 1 CID 51.34 5.03 1.00 1 2 999.98053 1998.95378 -0.93 35.08 7743 7743 MS2 16/34 Linfeng_081211_IgG_5.raw High ITQDTLYWNNYK IPI:IPI00966492.1 2 1 CID 59.34 4.49 1.00 1 2 779.87939 1558.75151 -1.38 33.65 7232 7232 MS2 18/22 Linfeng_081211_IgG_5.raw High ITQDTLYWNNYK IPI:IPI00966492.1 2 1 CID 44.24 3.70 1.00 1 2 779.88092 1558.75456 0.58 33.80 7411 7411 MS2 13/22 Linfeng_081211_IgG_6.raw IPI:IPI00000733.4 573 64.0 8.92 U3 small nucleolar RNA-associated protein 18 homolog 12.91 7 5 59.62 9.95 4 4 38.57 8.03 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FVDEGSLYGLSIATSR IPI:IPI00000733.4 5 1 CID 102.21 5.71 1.00 1 2 857.93555 1714.86382 -0.52 39.22 9016 9016 MS2 21/30 Linfeng_081211_IgG_4.raw High VYASSGDGEVYVWDVNSR IPI:IPI00000733.4 3 1 CID 77.36 5.56 1.00 1 2 1001.95801 2002.90874 -2.72 36.21 8037 8037 MS2 20/34 Linfeng_081211_IgG_4.raw High FVDEGSLYGLSIATSR IPI:IPI00000733.4 5 1 CID 89.60 5.36 1.00 1 2 857.93152 1714.85576 -5.22 39.10 4649 4649 MS2 24/30 Linfeng_091611_rIgG_4.raw High LVHLPScTVFSNFPVIK IPI:IPI00000733.4 1 1 CID C7(Carbamidomethyl) 33.73 4.74 1.00 1 3 653.35547 1958.05185 -2.58 40.89 4882 4882 MS2 24/64 Linfeng_091611_rIgG_4.raw High TGNFISTSTSLPR IPI:IPI00000733.4 1 1 CID 55.05 4.39 1.00 1 2 690.85699 1380.70671 -3.70 30.96 3587 3587 MS2 18/24 Linfeng_091611_rIgG_4.raw High TGNFISTSTSLPR IPI:IPI00000733.4 1 1 CID 54.78 3.60 1.00 1 2 690.85980 1380.71233 0.37 31.60 6603 6603 MS2 17/24 Linfeng_081211_IgG_4.raw High SGYFALGNEK IPI:IPI00000733.4 1 1 CID 24.77 3.49 1.00 1 2 543.26666 1085.52605 -0.18 31.07 6430 6430 MS2 14/18 Linfeng_081211_IgG_4.raw IPI:IPI00004968.1 504 55.1 6.61 Pre-mRNA-processing factor 19 9.52 5 3 42.20 9.52 4 3 22.87 4.56 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VTSVVFHPSQDLVFSASPDATIR 1 0 CID 17.82 4.45 1.00 1 3 825.09308 2473.26468 -3.07 38.01 4581 4581 MS2 21/88 Linfeng_091811_SIN3A_5.raw High VTSVVFHPSQDLVFSASPDATIR IPI:IPI00004968.1 1 1 CID 42.78 4.36 1.00 1 3 825.09601 2473.27347 0.49 37.87 8567 8567 MS2 19/88 Linfeng_081211_IgG_5.raw High TLQLDNNFEVK IPI:IPI00004968.1 1 1 CID 52.29 3.86 1.00 1 2 660.84222 1320.67717 -1.73 33.48 7168 7168 MS2 16/20 Linfeng_081211_IgG_5.raw High IWSVPNAScVQVVR IPI:IPI00004968.1 1 1 CID C9(Carbamidomethyl) 98.04 3.77 1.00 1 2 807.92322 1614.83916 -1.85 35.48 7884 7884 MS2 20/26 Linfeng_081211_IgG_5.raw High TLQLDNNFEVK IPI:IPI00004968.1 1 1 CID 38.62 3.54 1.00 1 2 660.84277 1320.67827 -0.90 33.59 7338 7338 MS2 13/20 Linfeng_081211_IgG_6.raw IPI:IPI00007928.4 2335 273.4 8.84 Pre-mRNA-processing-splicing factor 8 6.47 18 9 142.36 2.44 4 4 157.21 3.25 8 4 119.19 3.94 6 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SQEPLPDDDEEFELPEFVEPFLK IPI:IPI00007928.4 1 1 CID 67.31 6.33 1.00 1 3 917.09692 2749.27622 -0.23 51.72 6052 6052 MS2 30/88 Linfeng_091611_rIgG_1.raw High HGDEIITSTTSNYETQTFSSK IPI:IPI00007928.4 1 1 CID 47.77 6.08 1.00 1 3 782.69366 2346.06644 -2.90 29.60 3204 3204 MS2 28/80 Linfeng_091611_rIgG_1.raw High HGDEIITSTTSNYETQTFSSK IPI:IPI00007928.4 1 1 CID 48.40 6.08 1.00 1 3 782.69214 2346.06186 -4.85 29.74 3332 3332 MS2 28/80 Linfeng_091811_SIN3A_1.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 31.95 5.65 1.00 1 3 561.98920 1683.95304 0.13 49.99 5835 5835 MS2 26/56 Linfeng_091611_rIgG_1.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 27.70 5.55 1.00 1 3 561.98859 1683.95121 -0.95 50.42 5995 5995 MS2 25/56 Linfeng_091811_SIN3A_1.raw High ATEPQmVLFNLYDDWLK IPI:IPI00007928.4 1 1 CID M6(Oxidation) 35.46 5.38 1.00 1 3 700.34351 2099.01596 0.22 52.25 6118 6118 MS2 23/64 Linfeng_091611_rIgG_1.raw High SQEPLPDDDEEFELPEFVEPFLK IPI:IPI00007928.4 1 1 CID 56.82 5.36 1.00 1 3 917.09601 2749.27347 -1.23 51.81 6035 6035 MS2 27/88 Linfeng_091611_rIgG_2.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 73.52 5.29 1.00 1 2 842.47931 1683.95134 -0.87 50.11 5822 5822 MS2 20/28 Linfeng_091611_rIgG_2.raw High SQEPLPDDDEEFELPEFVEPFLK IPI:IPI00007928.4 1 1 CID 64.14 5.16 1.00 1 3 917.09589 2749.27311 -1.36 51.99 6183 6183 MS2 29/88 Linfeng_091811_SIN3A_1.raw High NNVNVASLTQSEIR IPI:IPI00007928.4 1 1 CID 76.54 5.09 1.00 1 2 772.90210 1544.79692 -3.79 31.70 3591 3591 MS2 20/26 Linfeng_091811_SIN3A_1.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 65.07 4.99 1.00 1 2 842.47913 1683.95098 -1.09 49.99 5834 5834 MS2 20/28 Linfeng_091611_rIgG_1.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 74.60 4.98 1.00 1 2 842.47858 1683.94988 -1.74 50.31 5982 5982 MS2 18/28 Linfeng_091811_SIN3A_1.raw High EELGLIEQAYDNPHEALSR IPI:IPI00007928.4 1 1 CID 82.96 4.85 1.00 1 3 728.68860 2184.05124 -2.56 35.75 4125 4125 MS2 22/72 Linfeng_091811_SIN3A_1.raw High EAVVNTQELLDLLVK IPI:IPI00007928.4 1 1 CID 70.28 4.66 1.00 1 2 842.48193 1683.95659 2.24 53.80 9772 9772 MS2 22/28 Linfeng_081211_IgG_1.raw High AQIAGYLYGVSPPDNPQVK IPI:IPI00007928.4 1 1 CID 46.29 4.37 1.00 1 2 1009.02216 2017.03703 -0.97 43.18 7117 7117 MS2 18/36 Linfeng_081211_IgG_1.raw High SQEPLPDDDEEFELPEFVEPFLK IPI:IPI00007928.4 1 1 CID 141.22 4.31 1.00 1 2 1375.14270 2749.27812 0.47 51.78 6060 6060 MS2 17/44 Linfeng_091611_rIgG_1.raw High GSELQLPFQAcLK IPI:IPI00007928.4 1 1 CID C11(Carbamidomethyl) 48.37 4.16 1.00 1 2 745.88727 1490.76726 0.01 47.31 8367 8367 MS2 16/24 Linfeng_081211_IgG_1.raw High TAEEVAALIR IPI:IPI00007928.4 1 1 CID 50.65 3.85 1.00 1 2 536.80341 1072.59953 -0.21 34.05 7776 7776 MS2 16/18 Linfeng_081211_IgG_3.raw IPI:IPI00010105.1 245 26.6 4.68 Eukaryotic translation initiation factor 6 25.71 6 4 23.21 25.71 4 4 18.94 15.51 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TSIEDQDELSSLLQVPLVAGTVNR IPI:IPI00010105.1 2 1 CID 97.56 5.78 1.00 1 3 862.11987 2584.34507 -0.58 48.73 11700 11700 MS2 36/92 Linfeng_081211_IgG_8.raw High TSIEDQDELSSLLQVPLVAGTVNR 2 0 CID 111.50 5.74 1.00 1 3 862.11877 2584.34177 -1.86 49.03 5665 5665 MS2 36/92 Linfeng_091811_SIN3A_8.raw High LNEAQPSTIATSmR 2 0 CID M13(Oxidation) 104.45 4.78 1.00 1 2 767.87683 1534.74639 -4.35 23.36 2336 2336 MS2 21/26 Linfeng_091811_SIN3A_8.raw High LNEAQPSTIATSmR IPI:IPI00010105.1 2 1 CID M13(Oxidation) 52.43 3.95 1.00 1 2 767.87897 1534.75066 -1.56 23.50 4232 4232 MS2 18/26 Linfeng_081211_IgG_8.raw High ETEEILADVLK IPI:IPI00010105.1 1 1 CID 52.00 3.79 1.00 1 2 630.33997 1259.67266 -0.27 39.58 9448 9448 MS2 15/20 Linfeng_081211_IgG_8.raw High ASFENNcEIGcFAK IPI:IPI00010105.1 6 1 CID "C7(Carbamidomethyl), C11(Carbamidomethyl)" 58.58 3.72 1.00 1 2 823.84967 1646.69206 -1.07 31.45 6779 6779 MS2 16/26 Linfeng_081211_IgG_8.raw IPI:IPI00011913.1 305 30.8 9.29 Heterogeneous nuclear ribonucleoprotein A0 14.43 8 3 60.16 14.43 4 3 37.00 4.92 2 1 31.95 9.18 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LFIGGLNVQTSESGLR IPI:IPI00011913.1 1 1 CID 101.66 5.31 1.00 1 2 845.95923 1690.91118 -0.69 38.96 9129 9129 MS2 20/30 Linfeng_081211_IgG_7.raw High SGGGGGGGGSSWGGR 1 0 CID 78.34 5.23 1.00 1 2 596.75726 1192.50725 -1.53 17.49 1654 1654 MS2 18/28 Linfeng_091811_SIN3A_6.raw High SGGGGGGGGSSWGGR 1 0 CID 90.83 5.14 1.00 1 2 596.75793 1192.50859 -0.40 17.06 1553 1553 MS2 22/28 Linfeng_091611_rIgG_7.raw High SGGGGGGGGSSWGGR 1 0 CID 69.52 4.93 1.00 1 2 596.75732 1192.50737 -1.43 17.47 1676 1676 MS2 21/28 Linfeng_091611_rIgG_6.raw High SGGGGGGGGSSWGGR IPI:IPI00011913.1 1 1 CID 62.67 4.09 1.00 1 2 596.75934 1192.51140 1.95 18.33 2574 2574 MS2 18/28 Linfeng_081211_IgG_6.raw High EDIYSGGGGGGSR 1 0 CID 33.54 4.08 1.00 1 2 606.26630 1211.52532 -2.86 19.63 1956 1956 MS2 20/24 Linfeng_091811_SIN3A_6.raw High SGGGGGGGGSSWGGR IPI:IPI00011913.1 1 1 CID 64.62 3.89 1.00 1 2 596.75903 1192.51079 1.44 18.82 2533 2533 MS2 18/28 Linfeng_081211_IgG_7.raw High EDIYSGGGGGGSR IPI:IPI00011913.1 1 1 CID 10.04 3.50 1.00 1 2 606.26794 1211.52861 -0.14 20.19 3161 3161 MS2 15/24 Linfeng_081211_IgG_6.raw IPI:IPI00018278.3 128 13.5 10.58 Histone H2A.V 25.78 6 3 184.68 25.78 4 3 74.96 10.94 1 1 67.46 10.94 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATIAGGGVIPHIHK 6 0 CID 75.69 4.70 1.00 1 2 685.89764 1370.78801 -1.71 25.66 2469 2469 MS2 18/26 Linfeng_091611_rIgG_10.raw High ATIAGGGVIPHIHK IPI:IPI00218448.4 6 1 CID 72.04 4.50 1.00 1 2 685.89777 1370.78826 -1.54 26.27 4971 4971 MS2 18/26 Linfeng_081211_IgG_10.raw High ATIAGGGVIPHIHK 6 0 CID 79.65 4.44 1.00 1 2 685.89465 1370.78203 -6.08 25.89 2635 2635 MS2 18/26 Linfeng_091811_SIN3A_10.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 44.14 3.53 1.00 1 2 472.76935 944.53142 0.15 33.07 7089 7089 MS2 13/16 Linfeng_081211_IgG_10.raw High GDEELDSLIK IPI:IPI00218448.4 9 1 CID 50.85 3.49 1.00 1 2 559.78217 1118.55705 -0.51 34.03 7435 7435 MS2 15/18 Linfeng_081211_IgG_10.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 50.13 3.48 1.00 1 2 472.76831 944.52934 -2.05 32.00 6788 6788 MS2 13/16 Linfeng_081211_IgG_10.raw IPI:IPI00025039.1 321 33.8 10.18 rRNA 2'-O-methyltransferase fibrillarin 22.12 15 4 88.20 9.97 4 2 85.01 16.20 6 3 73.11 16.20 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MLIAMVDVIFADVAQPDQTR IPI:IPI00025039.1 1 1 CID 84.40 6.96 1.00 1 3 745.05194 2233.14127 2.51 54.70 6505 6505 MS2 38/76 Linfeng_091611_rIgG_6.raw High ANcIDSTASAEAVFASEVK IPI:IPI00025039.1 1 1 CID C3(Carbamidomethyl) 106.30 6.63 1.00 1 2 985.46191 1969.91655 -0.35 38.45 8940 8940 MS2 19/36 Linfeng_081211_IgG_6.raw High MQQENMKPQEQLTLEPYER IPI:IPI00025039.1 1 1 CID 71.76 6.26 1.00 1 3 798.04437 2392.11856 -3.64 30.71 3495 3495 MS2 25/72 Linfeng_091611_rIgG_6.raw High mQQENmKPQEQLTLEPYER IPI:IPI00025039.1 1 1 CID "M1(Oxidation), M6(Oxidation)" 93.89 6.24 1.00 1 3 808.70935 2424.11350 -1.48 28.35 3177 3177 MS2 26/72 Linfeng_091611_rIgG_6.raw High mLIAMVDVIFADVAQPDQTR 1 0 CID M1(Oxidation) 86.95 6.11 1.00 1 3 750.38171 2249.13059 0.00 53.10 6286 6286 MS2 29/76 Linfeng_091811_SIN3A_6.raw High MQQENmKPQEQLTLEPYER 1 0 CID M6(Oxidation) 49.12 5.77 1.00 1 3 803.37659 2408.11521 -2.89 29.12 3270 3270 MS2 25/72 Linfeng_091811_SIN3A_6.raw High mQQENmKPQEQLTLEPYER 1 0 CID "M1(Oxidation), M6(Oxidation)" 80.38 5.71 1.00 1 3 808.70789 2424.10910 -3.29 28.57 3195 3195 MS2 28/72 Linfeng_091811_SIN3A_6.raw High MQQENmKPQEQLTLEPYER IPI:IPI00025039.1 1 1 CID M6(Oxidation) 53.39 5.65 1.00 1 3 803.37708 2408.11667 -2.29 28.98 3262 3262 MS2 25/72 Linfeng_091611_rIgG_6.raw High mLIAMVDVIFADVAQPDQTR IPI:IPI00025039.1 1 1 CID M1(Oxidation) 91.98 5.57 1.00 1 3 750.38068 2249.12748 -1.38 52.71 6290 6290 MS2 28/76 Linfeng_091611_rIgG_6.raw High mQQENMKPQEQLTLEPYER 1 0 CID M1(Oxidation) 102.93 5.43 1.00 1 3 803.37634 2408.11448 -3.20 30.13 3406 3406 MS2 29/72 Linfeng_091811_SIN3A_6.raw High ANcIDSTASAEAVFASEVK IPI:IPI00025039.1 1 1 CID C3(Carbamidomethyl) 41.38 5.28 1.00 1 3 657.31219 1969.92203 2.43 37.64 8693 8693 MS2 27/72 Linfeng_081211_IgG_6.raw High ANcIDSTASAEAVFASEVK IPI:IPI00025039.1 1 1 CID C3(Carbamidomethyl) 82.43 4.79 1.00 1 2 985.46301 1969.91875 0.76 37.43 8627 8627 MS2 18/36 Linfeng_081211_IgG_6.raw High VSISEGDDKIEYR IPI:IPI00025039.1 1 1 CID 90.40 4.32 1.00 1 2 755.86798 1510.72869 -6.46 26.21 2886 2886 MS2 17/24 Linfeng_091611_rIgG_6.raw High VSISEGDDKIEYR 1 0 CID 97.42 4.24 1.00 1 2 755.86761 1510.72795 -6.94 26.40 2897 2897 MS2 18/24 Linfeng_091811_SIN3A_6.raw High VSISEGDDKIEYR IPI:IPI00025039.1 1 1 CID 96.57 3.82 1.00 1 2 755.87128 1510.73528 -2.09 26.94 5123 5123 MS2 16/24 Linfeng_081211_IgG_6.raw IPI:IPI00027230.3 803 92.4 4.84 Endoplasmin 4.61 4 3 68.23 4.61 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GVVDSDDLPLNVSR IPI:IPI00027230.3 2 1 CID 59.86 4.43 1.00 1 2 743.38116 1485.75505 0.41 34.83 8083 8083 MS2 18/26 Linfeng_081211_IgG_3.raw High DISTNYYASQK IPI:IPI00027230.3 2 1 CID 57.20 3.87 1.00 1 2 645.30310 1289.59892 -1.49 26.80 5248 5248 MS2 14/20 Linfeng_081211_IgG_3.raw High ELISNASDALDK IPI:IPI00027230.3;IPI:IPI00414676.6 4 2 CID 49.34 3.75 1.00 1 2 638.32483 1275.64238 -0.29 29.84 5998 5998 MS2 18/22 Linfeng_081211_IgG_7.raw High ELISNASDALDK IPI:IPI00027230.3;IPI:IPI00414676.6 4 2 CID 29.40 3.72 1.00 1 2 638.32489 1275.64250 -0.19 29.60 5986 5986 MS2 14/22 Linfeng_081211_IgG_10.raw IPI:IPI00102815.1 800 92.5 9.17 Nucleolar complex protein 3 homolog 6.13 4 4 55.13 6.13 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YSSEVATESPLDFTK IPI:IPI00102815.1 2 1 CID 71.98 4.66 1.00 1 2 837.39862 1673.78996 -0.34 35.79 8431 8431 MS2 17/28 Linfeng_081211_IgG_3.raw High LGQASLGVIK IPI:IPI00102815.1 2 1 CID 32.02 4.16 1.00 1 2 493.30469 985.60210 -2.04 30.36 6412 6412 MS2 17/18 Linfeng_081211_IgG_3.raw High EFEEGLVSQYK IPI:IPI00102815.1 2 1 CID 44.31 3.86 1.00 1 2 664.82141 1328.63555 -1.04 32.71 7277 7277 MS2 14/20 Linfeng_081211_IgG_3.raw High SPLLPAVLEGLAK IPI:IPI00102815.1 2 1 CID 69.76 3.53 1.00 1 2 654.40228 1307.79729 2.98 46.42 11966 11966 MS2 15/24 Linfeng_081211_IgG_3.raw IPI:IPI00169325.1 951 105.3 7.53 WD repeat-containing protein 36 8.20 9 5 87.09 4.73 4 3 35.19 1.47 2 1 85.52 3.47 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DFELAQAYLALFLK 2 0 CID 80.68 6.02 1.00 1 3 547.96710 1641.88675 -1.21 55.11 6008 6008 MS2 35/52 Linfeng_091611_rIgG_3.raw High DFELAQAYLALFLK IPI:IPI00169325.1 2 1 CID 83.01 5.86 1.00 1 2 821.44928 1641.89128 1.55 55.20 6500 6500 MS2 23/26 Linfeng_091811_SIN3A_3.raw High DFELAQAYLALFLK 2 0 CID 81.74 5.84 1.00 1 2 821.44849 1641.88970 0.58 55.13 6010 6010 MS2 23/26 Linfeng_091611_rIgG_3.raw High DFELAQAYLALFLK IPI:IPI00169325.1 2 1 CID 77.02 5.37 1.00 1 3 547.96857 1641.89115 1.47 55.20 6499 6499 MS2 34/52 Linfeng_091811_SIN3A_3.raw High GVAVDGLNQLTVTTGSEGLLK IPI:IPI00169325.1 4 1 CID 33.35 5.24 1.00 1 3 691.38055 2072.12711 1.75 41.24 10269 10269 MS2 23/80 Linfeng_081211_IgG_3.raw High GVAVDGLNQLTVTTGSEGLLK IPI:IPI00169325.1 4 1 CID 51.95 4.91 1.00 1 2 1036.56714 2072.12700 1.70 41.37 10316 10316 MS2 17/40 Linfeng_081211_IgG_3.raw High EFSGHQGQINDmAFSPDGR IPI:IPI00169325.1 3 1 CID M12(Oxidation) 71.29 4.85 1.00 1 3 703.63855 2108.90110 -3.82 27.40 3024 3024 MS2 26/72 Linfeng_091811_SIN3A_3.raw High YAAPEQNNDPQQSK IPI:IPI00169325.1 2 1 CID 92.19 3.66 1.00 1 2 795.36371 1589.72014 0.66 19.29 2684 2684 MS2 19/26 Linfeng_081211_IgG_3.raw High TASALFAGFR IPI:IPI00169325.1 3 1 CID 36.56 3.56 1.00 1 2 520.78003 1040.55278 0.36 37.89 9158 9158 MS2 16/18 Linfeng_081211_IgG_3.raw IPI:IPI00220706.10 147 16.1 7.20 Hemoglobin subunit gamma-1 38.10 5 4 42.63 38.10 4 4 4.58 8.84 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FFDSFGNLSSASAImGNPK IPI:IPI00220706.10 7 1 CID M15(Oxidation) 93.43 5.48 1.00 1 2 1003.47150 2005.93572 1.60 38.62 8938 8938 MS2 16/36 Linfeng_081211_IgG_10.raw High VNVEDAGGETLGR IPI:IPI00220706.10 6 1 CID 64.34 4.81 1.00 1 2 658.82513 1316.64299 -0.89 26.25 4966 4966 MS2 20/24 Linfeng_081211_IgG_10.raw High VNVEDAGGETLGR 6 0 CID 74.71 4.58 1.00 1 2 658.82178 1316.63628 -5.99 25.95 2644 2644 MS2 21/24 Linfeng_091811_SIN3A_10.raw High EFTPEVQASWQK IPI:IPI00220706.10 8 1 CID 53.30 3.91 1.00 1 2 725.35303 1449.69878 -1.49 31.87 6742 6742 MS2 15/22 Linfeng_081211_IgG_10.raw High mVTAVASALSSR IPI:IPI00220706.10 3 1 CID M1(Oxidation) 58.83 3.62 1.00 1 2 604.81763 1208.62798 -2.02 27.76 5376 5376 MS2 17/22 Linfeng_081211_IgG_10.raw IPI:IPI00220834.8 732 82.7 5.81 X-ray repair cross-complementing protein 5 23.22 16 10 94.75 7.10 4 4 45.77 12.30 4 4 84.16 18.58 8 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YAPTEAQLNAVDALIDSMSLAK IPI:IPI00220834.8 1 1 CID 93.95 6.92 1.00 1 3 774.39600 2321.17344 1.72 52.20 6206 6206 MS2 35/84 Linfeng_091811_SIN3A_3.raw High DDEAAAVALSSLIHALDDLDmVAIVR IPI:IPI00220834.8 1 1 CID M21(Oxidation) 300.00 6.70 1.00 1 4 685.60321 2739.39101 1.43 55.51 6534 6534 MS2 47/150 Linfeng_091811_SIN3A_3.raw High ETVYcLNDDDETEVLKEDIIQGFR IPI:IPI00220834.8 1 1 CID C5(Carbamidomethyl) 78.45 6.60 1.00 1 3 967.78436 2901.33854 -2.57 44.00 4654 4654 MS2 21/92 Linfeng_091611_rIgG_3.raw High DDEAAAVALSSLIHALDDLDmVAIVR IPI:IPI00220834.8 1 1 CID M21(Oxidation) 90.16 6.30 1.00 1 4 685.60272 2739.38906 0.72 55.42 6049 6049 MS2 42/150 Linfeng_091611_rIgG_3.raw High DKPSGDTAAVFEEGGDVDDLLDmI IPI:IPI00220834.8 1 1 CID M23(Oxidation) 92.83 6.26 1.00 1 3 842.37787 2525.11905 -1.85 48.88 5261 5261 MS2 28/92 Linfeng_091611_rIgG_3.raw High HLmLPDFDLLEDIESK IPI:IPI00220834.8 3 1 CID M3(Oxidation) 80.05 5.58 1.00 1 3 644.31982 1930.94492 -0.95 46.72 5538 5538 MS2 28/60 Linfeng_091811_SIN3A_3.raw High ETVYcLNDDDETEVLKEDIIQGFR IPI:IPI00220834.8 1 1 CID C5(Carbamidomethyl) 105.37 5.57 1.00 1 3 967.78564 2901.34238 -1.24 44.20 5220 5220 MS2 24/92 Linfeng_091811_SIN3A_3.raw High KKDQVTAQEIFQDNHEDGPTAK IPI:IPI00220834.8 1 1 CID 42.01 5.36 1.00 1 4 625.55585 2499.20156 -3.83 25.32 2733 2733 MS2 30/126 Linfeng_091811_SIN3A_3.raw High HLmLPDFDLLEDIESK IPI:IPI00220834.8 3 1 CID M3(Oxidation) 56.95 5.26 1.00 1 3 644.31927 1930.94327 -1.80 46.44 4963 4963 MS2 29/60 Linfeng_091611_rIgG_3.raw High EEASGSSVTAEEAK IPI:IPI00220834.8 1 1 CID 101.29 4.67 1.00 1 2 697.81653 1394.62578 -1.76 17.15 1585 1585 MS2 21/26 Linfeng_091811_SIN3A_3.raw High ETVYcLNDDDETEVLK IPI:IPI00220834.8 1 1 CID C5(Carbamidomethyl) 70.65 4.66 1.00 1 2 971.93457 1942.86186 1.63 34.47 7945 7945 MS2 16/30 Linfeng_081211_IgG_3.raw High ETVYcLNDDDETEVLKEDIIQGFR IPI:IPI00220834.8 1 1 CID C5(Carbamidomethyl) 30.11 4.41 1.00 1 4 726.09192 2901.34585 -0.05 44.25 5226 5226 MS2 26/138 Linfeng_091811_SIN3A_3.raw High TDTLEDLFPTTK IPI:IPI00220834.8 1 1 CID 65.59 4.31 1.00 1 2 690.84894 1380.69060 0.90 40.52 10028 10028 MS2 16/22 Linfeng_081211_IgG_3.raw High TDTLEDLFPTTK IPI:IPI00220834.8 1 1 CID 66.02 4.24 1.00 1 2 690.84723 1380.68718 -1.58 39.71 4646 4646 MS2 19/22 Linfeng_091811_SIN3A_3.raw High EEASGSSVTAEEAK IPI:IPI00220834.8 1 1 CID 75.16 3.83 1.00 1 2 697.81836 1394.62944 0.87 19.06 2598 2598 MS2 17/26 Linfeng_081211_IgG_3.raw High LTIGSNLSIR IPI:IPI00220834.8 1 1 CID 39.10 3.46 1.00 1 2 537.31952 1073.63176 0.35 34.15 7814 7814 MS2 16/18 Linfeng_081211_IgG_3.raw IPI:IPI00239815.9 686 76.8 8.85 Isoform 1 of Cirhin 13.70 10 6 51.63 8.16 4 4 50.64 11.95 5 5 42.24 2.62 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDGTVEIYNLSANYFQEK IPI:IPI00239815.9 3 1 CID 106.49 6.72 1.00 1 3 697.99817 2091.97995 -3.37 41.16 4918 4918 MS2 35/68 Linfeng_091611_rIgG_4.raw High TDGTVEIYNLSANYFQEK 3 0 CID 63.48 6.26 1.00 1 3 697.99921 2091.98307 -1.88 41.53 4899 4899 MS2 28/68 Linfeng_091811_SIN3A_4.raw High TLVAVERPLDDIIAQLPPPIK IPI:IPI00239815.9 3 1 CID 73.15 5.44 1.00 1 4 575.34021 2298.33901 -1.85 46.29 5567 5567 MS2 35/120 Linfeng_091611_rIgG_4.raw High VQFWDSATGTLVK IPI:IPI00399197.1 4 1 CID 82.15 4.81 1.00 1 2 726.38007 1451.75286 -0.08 37.47 8459 8459 MS2 20/24 Linfeng_081211_IgG_4.raw High SALQILFSEDSTK IPI:IPI00239815.9 3 1 CID 85.31 4.48 1.00 1 2 719.87280 1438.73833 -2.87 40.39 4816 4816 MS2 20/24 Linfeng_091611_rIgG_4.raw High TLLYNPFPPTNESDVIR IPI:IPI00239815.9 3 1 CID 89.54 4.39 1.00 1 2 988.50616 1976.00505 -3.74 40.50 4831 4831 MS2 14/32 Linfeng_091611_rIgG_4.raw High SALQILFSEDSTK IPI:IPI00399197.1 3 1 CID 73.92 4.20 1.00 1 2 719.87567 1438.74407 1.12 40.73 9478 9478 MS2 16/24 Linfeng_081211_IgG_4.raw High VQFWDSATGTLVK IPI:IPI00239815.9 4 1 CID 82.01 4.18 1.00 1 2 726.37817 1451.74907 -2.69 37.03 4378 4378 MS2 20/24 Linfeng_091611_rIgG_4.raw High ATEALcWAEGQR IPI:IPI00399197.1 3 1 CID C6(Carbamidomethyl) 56.39 4.11 1.00 1 2 696.32196 1391.63664 -0.47 31.68 6628 6628 MS2 17/22 Linfeng_081211_IgG_4.raw High TDGTVEIYNLSANYFQEK IPI:IPI00399197.1 3 1 CID 69.10 3.98 1.00 1 2 1046.49756 2091.98784 0.40 41.03 9573 9573 MS2 15/34 Linfeng_081211_IgG_4.raw IPI:IPI00291939.1 1233 143.1 7.64 Structural maintenance of chromosomes protein 1A 8.11 8 8 157.45 3.73 4 4 117.39 4.38 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AFVSmVYSEEGAEDR IPI:IPI00291939.1 4 1 CID M5(Oxidation) 113.47 5.85 1.00 1 2 853.37036 1705.73345 -2.36 29.58 3209 3209 MS2 24/28 Linfeng_091611_rIgG_2.raw High DKFQETSDEFEAAR IPI:IPI00291939.1 1 1 CID 94.74 5.55 1.00 1 3 558.25110 1672.73874 -3.74 27.71 2959 2959 MS2 31/52 Linfeng_091611_rIgG_2.raw High IEKLEEYITTSK IPI:IPI00291939.1 2 1 CID 57.28 4.62 1.00 1 3 485.26245 1453.77280 -3.92 29.70 3225 3225 MS2 24/44 Linfeng_091611_rIgG_2.raw High ELNQVmEQLGDAR IPI:IPI00291939.1 2 1 CID M6(Oxidation) 35.60 4.15 1.00 1 2 759.86371 1518.72014 -1.07 28.03 3001 3001 MS2 11/24 Linfeng_091611_rIgG_2.raw High LNEQQSVLQR IPI:IPI00291939.1 1 1 CID 64.53 3.77 1.00 1 2 607.82727 1214.64726 -1.28 25.20 4350 4350 MS2 14/18 Linfeng_081211_IgG_2.raw High IIDETmAQLQDLK IPI:IPI00291939.1 1 1 CID M6(Oxidation) 19.28 3.64 1.00 1 2 767.39575 1533.78423 0.82 32.39 6444 6444 MS2 13/24 Linfeng_081211_IgG_2.raw High SGVISGGASDLK IPI:IPI00291939.1 2 1 CID 39.71 3.59 1.00 1 2 545.78943 1090.57158 -2.16 25.85 4561 4561 MS2 16/22 Linfeng_081211_IgG_2.raw High NmDAIIVDSEK IPI:IPI00291939.1 2 1 CID M2(Oxidation) 23.03 3.48 1.00 1 2 625.79980 1250.59233 -0.83 27.16 4966 4966 MS2 14/20 Linfeng_081211_IgG_2.raw IPI:IPI00300078.6 919 102.4 6.15 Periodic tryptophan protein 2 homolog 7.40 7 5 66.39 4.35 4 3 30.82 1.85 1 1 48.90 3.05 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GEIEVVTSSLPELYVEK IPI:IPI00300078.6 1 1 CID 110.35 5.91 1.00 1 2 946.49640 1891.98552 -2.36 42.00 4941 4941 MS2 22/32 Linfeng_091811_SIN3A_3.raw High GEIEVVTSSLPELYVEK 1 0 CID 99.81 5.71 1.00 1 2 946.49493 1891.98259 -3.91 41.80 4375 4375 MS2 21/32 Linfeng_091611_rIgG_3.raw High GNLNFTcDGNSVISPVGNR IPI:IPI00300078.6 2 1 CID C7(Carbamidomethyl) 11.81 4.95 1.00 1 3 674.32349 2020.95591 2.62 35.44 8305 8305 MS2 21/72 Linfeng_081211_IgG_3.raw High DMSTWVFGAER IPI:IPI00300078.6 1 1 CID 65.40 4.12 1.00 1 2 649.79407 1298.58086 -2.01 41.31 4853 4853 MS2 17/20 Linfeng_091811_SIN3A_3.raw High LVQEALEAVPR IPI:IPI00300078.6 1 1 CID 52.09 3.90 1.00 1 2 612.85083 1224.69438 -0.28 33.59 7611 7611 MS2 16/20 Linfeng_081211_IgG_3.raw High GNLNFTcDGNSVISPVGNR IPI:IPI00300078.6 2 1 CID C7(Carbamidomethyl) 59.11 3.88 1.00 1 2 1010.97943 2020.95159 0.49 35.09 8182 8182 MS2 15/36 Linfeng_081211_IgG_3.raw High FSNLLGTVYR IPI:IPI00300078.6 2 1 CID 63.08 3.77 1.00 1 2 585.31964 1169.63201 0.54 37.38 8969 8969 MS2 17/18 Linfeng_081211_IgG_3.raw IPI:IPI00328103.4 459 49.8 5.05 "Keratin, type I cytoskeletal 27" 6.54 4 3 135.44 6.54 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALEEANADLEQK IPI:IPI00328103.4 1 1 CID 50.79 3.87 1.00 1 2 665.82697 1330.64665 -1.44 24.74 4406 4406 MS2 15/22 Linfeng_081211_IgG_7.raw High DAEAWFNEK IPI:IPI00009865.4;IPI:IPI00328103.4 4 2 CID 36.71 3.54 1.00 1 2 555.24731 1109.48735 -2.27 33.99 7365 7365 MS2 13/16 Linfeng_081211_IgG_5.raw High VTmQNLNDR IPI:IPI00009865.4;IPI:IPI00217963.3;IPI:IPI00328103.4;IPI:IPI00384444.6 9 4 CID M3(Oxidation) 45.48 3.50 1.00 1 2 553.76672 1106.52617 0.21 18.27 1719 1719 MS2 15/16 Linfeng_081211_IgG_1.raw High DAEAWFNEK IPI:IPI00009865.4;IPI:IPI00328103.4 4 2 CID 28.18 3.47 1.00 1 2 555.24786 1109.48845 -1.28 33.61 7539 7539 MS2 13/16 Linfeng_081211_IgG_8.raw IPI:IPI00394982.1 491 55.2 9.66 probable ATP-dependent RNA helicase DDX52 isoform b 17.52 6 5 40.04 8.76 4 3 25.68 8.76 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NSAVETVEQELLFVGSETGK IPI:IPI00394982.1 2 1 CID 119.54 6.70 1.00 1 3 713.02557 2137.06217 -1.80 48.69 5864 5864 MS2 34/76 Linfeng_091611_rIgG_4.raw High IHVQGTDLPDPIATFQQLDQEYK IPI:IPI00394982.1 2 1 CID 74.26 6.47 1.00 1 3 886.11121 2656.31906 -2.39 44.73 5373 5373 MS2 28/88 Linfeng_091611_rIgG_4.raw High SVANVIQQAGcPVPEYIK IPI:IPI00394982.1 2 1 CID C11(Carbamidomethyl) 90.56 4.85 1.00 1 3 658.34448 1973.01889 1.39 36.33 8077 8077 MS2 28/68 Linfeng_081211_IgG_4.raw High SVANVIQQAGcPVPEYIK IPI:IPI00394982.1 2 1 CID C11(Carbamidomethyl) 77.44 4.44 1.00 1 2 987.01208 1973.01689 0.37 36.36 8086 8086 MS2 17/34 Linfeng_081211_IgG_4.raw High DQLASIFLAcTSHK IPI:IPI00394982.1 2 1 CID C10(Carbamidomethyl) 41.81 3.85 1.00 1 2 795.90094 1590.79460 0.06 38.56 8806 8806 MS2 15/26 Linfeng_081211_IgG_4.raw High KFDILVTTPNR IPI:IPI00394982.1 2 1 CID 25.67 3.65 1.00 1 2 652.37195 1303.73662 -0.23 31.93 6705 6705 MS2 15/20 Linfeng_081211_IgG_4.raw IPI:IPI00402391.3 752 84.4 9.14 Isoform 3 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 7.45 6 4 41.67 4.92 4 3 15.20 2.53 1 1 31.48 1.99 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NYILDQTNVYGSAQR IPI:IPI00402391.3 4 1 CID 101.98 5.51 1.00 1 2 871.42780 1741.84831 -1.22 33.54 7592 7592 MS2 22/28 Linfeng_081211_IgG_3.raw High NYILDQTNVYGSAQR 4 0 CID 82.53 5.39 1.00 1 2 871.42731 1741.84734 -1.78 32.51 3713 3713 MS2 20/28 Linfeng_091811_SIN3A_3.raw High SSGYPLTIEGFAYLWSGAR IPI:IPI00402391.3 4 1 CID 105.24 5.38 1.00 1 2 1038.01538 2075.02349 0.07 51.37 5571 5571 MS2 19/36 Linfeng_091611_rIgG_3.raw High NYILDQTNVYGSAQR IPI:IPI00402391.3 4 1 CID 55.72 4.93 1.00 1 2 871.42767 1741.84807 -1.36 33.70 7653 7653 MS2 19/28 Linfeng_081211_IgG_3.raw High YNILGTNAImDK IPI:IPI00402391.3 4 1 CID M10(Oxidation) 34.40 4.19 1.00 1 2 684.84314 1368.67900 -2.80 33.79 7682 7682 MS2 17/22 Linfeng_081211_IgG_3.raw High SGGGGYSQNR IPI:IPI00402391.3 5 1 CID 41.08 3.78 1.00 1 2 491.72183 982.43639 2.70 13.00 981 981 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00413173.3 2896 319.2 9.51 Isoform Short of Antigen KI-67 5.25 14 10 253.97 2.62 4 4 213.13 2.21 3 3 232.57 4.28 7 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELFQTPcTDNPTTDEK IPI:IPI00413173.3 2 1 CID C7(Carbamidomethyl) 110.36 5.13 1.00 1 2 948.41821 1895.82915 -1.94 30.33 3411 3411 MS2 22/30 Linfeng_091811_SIN3A_1.raw High AAVGEEKDINTFVGTPVEK IPI:IPI00413173.3 2 1 CID 22.28 4.80 1.00 1 3 668.67926 2004.02323 -2.64 30.46 3428 3428 MS2 24/72 Linfeng_091811_SIN3A_1.raw High EEAQSLEDLAGFK IPI:IPI00413173.3 2 1 CID 53.22 4.80 1.00 1 2 718.84546 1436.68364 -4.73 36.89 4273 4273 MS2 21/24 Linfeng_091811_SIN3A_1.raw High KADVEEEFLALR IPI:IPI00413173.3 2 1 CID 10.28 4.67 1.00 1 3 473.91785 1419.73899 -6.28 35.95 4151 4151 MS2 23/44 Linfeng_091811_SIN3A_1.raw High EEAQSLEDLAGFK 2 0 CID 48.80 4.67 1.00 1 2 718.84534 1436.68340 -4.90 36.89 4160 4160 MS2 21/24 Linfeng_091611_rIgG_1.raw High KADVEEEFLALR 2 0 CID 17.73 4.60 1.00 1 3 473.91806 1419.73963 -5.83 35.74 4007 4007 MS2 21/44 Linfeng_091611_rIgG_1.raw High SPQSDPADTPTNTK IPI:IPI00413173.3 2 1 CID 99.96 4.58 1.00 1 2 729.83759 1458.66789 -1.96 16.35 1480 1480 MS2 19/26 Linfeng_091811_SIN3A_1.raw High EEAQALEDLTGFK IPI:IPI00413173.3 2 1 CID 40.73 4.53 1.00 1 2 725.85468 1450.70207 -2.77 38.36 4465 4465 MS2 21/24 Linfeng_091811_SIN3A_1.raw High SPQSDPADTPTNTK 2 0 CID 136.95 4.37 1.00 1 2 729.83844 1458.66960 -0.79 16.13 1363 1363 MS2 17/26 Linfeng_091611_rIgG_1.raw High DINTFLGTPVQK IPI:IPI00413173.3 2 1 CID 51.57 4.27 1.00 1 2 666.85883 1332.71037 -4.11 36.36 4205 4205 MS2 17/22 Linfeng_091811_SIN3A_1.raw High EEAQSLEDLAGFK IPI:IPI00413173.3 2 1 CID 31.97 4.05 1.00 1 2 718.84882 1436.69036 -0.06 43.82 7305 7305 MS2 12/24 Linfeng_081211_IgG_1.raw High AQSLVISPPAPSPR IPI:IPI00413173.3 3 1 CID 38.46 3.90 1.00 1 2 710.40063 1419.79399 -1.07 31.64 6871 6871 MS2 13/26 Linfeng_081211_IgG_3.raw High SEETNTEIVEcILK IPI:IPI00413173.3 2 1 CID C11(Carbamidomethyl) 52.58 3.61 1.00 1 2 832.90631 1664.80535 0.32 46.19 8038 8038 MS2 14/26 Linfeng_081211_IgG_1.raw High ADVEEEFLALR IPI:IPI00413173.3 2 1 CID 46.41 3.56 1.00 1 2 646.32788 1291.64849 -3.44 47.93 8511 8511 MS2 13/20 Linfeng_081211_IgG_1.raw IPI:IPI00440493.2 553 59.7 9.13 "ATP synthase subunit alpha, mitochondrial" 9.58 5 3 70.45 9.58 4 3 24.42 3.98 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EVAAFAQFGSDLDAATQQLLSR 2 0 CID 79.34 7.22 1.00 1 3 780.05981 2338.16489 -1.11 52.05 6238 6238 MS2 33/84 Linfeng_091611_rIgG_5.raw High EVAAFAQFGSDLDAATQQLLSR IPI:IPI00440493.2 2 1 CID 30.62 5.46 1.00 1 3 780.06097 2338.16837 0.38 51.82 12157 12157 MS2 26/84 Linfeng_081211_IgG_5.raw High ILGADTSVDLEETGR IPI:IPI00440493.2 5 1 CID 82.13 4.67 1.00 1 2 788.39655 1575.78581 -0.21 32.71 6885 6885 MS2 19/28 Linfeng_081211_IgG_5.raw High EVAAFAQFGSDLDAATQQLLSR IPI:IPI00440493.2 2 1 CID 50.38 4.66 1.00 1 2 1169.58984 2338.17241 2.11 51.88 12175 12175 MS2 19/42 Linfeng_081211_IgG_5.raw High TGAIVDVPVGEELLGR IPI:IPI00440493.2 4 1 CID 28.78 3.82 1.00 1 2 812.95093 1624.89458 2.47 40.62 9386 9386 MS2 17/30 Linfeng_081211_IgG_5.raw IPI:IPI00444262.3 603 65.9 4.55 "cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin" 11.77 7 5 87.32 8.13 4 4 62.61 3.65 2 1 72.80 3.65 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TLVLSNLSYSATEETLQEVFEK IPI:IPI00916188.1 4 1 CID 102.31 8.13 1.00 1 3 834.42432 2501.25840 -2.97 49.62 5354 5354 MS2 34/84 Linfeng_091611_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK IPI:IPI00916188.1 4 1 CID 104.09 7.90 1.00 1 3 834.42627 2501.26426 -0.63 49.66 5985 5985 MS2 34/84 Linfeng_091611_rIgG_4.raw High TLVLSNLSYSATEETLQEVFEK 4 0 CID 121.36 7.75 1.00 1 3 834.42578 2501.26279 -1.22 49.94 5938 5938 MS2 32/84 Linfeng_091811_SIN3A_3.raw High GFGFVDFNSEEDAK IPI:IPI00444262.3 4 1 CID 50.40 4.28 1.00 1 2 781.34448 1561.68169 0.69 39.92 9815 9815 MS2 18/26 Linfeng_081211_IgG_3.raw High FGYVDFESAEDLEK IPI:IPI00444262.3 2 1 CID 72.28 4.11 1.00 1 2 824.87244 1648.73760 -0.11 40.10 9877 9877 MS2 16/26 Linfeng_081211_IgG_3.raw High NDLAVVDVR IPI:IPI00444262.3 2 1 CID 43.52 3.67 1.00 1 2 500.77393 1000.54057 -1.67 30.67 6522 6522 MS2 15/16 Linfeng_081211_IgG_3.raw High GLSEDTTEETLK IPI:IPI00444262.3 4 1 CID 47.60 3.51 1.00 1 2 661.81830 1322.62932 -2.21 26.35 5108 5108 MS2 18/22 Linfeng_081211_IgG_3.raw IPI:IPI00449049.5 1014 113.0 8.88 Poly [ADP-ribose] polymerase 1 7.40 6 5 82.72 5.52 4 4 15.44 1.87 1 1 41.17 1.87 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VVSEDFLQDVSASTK IPI:IPI00449049.5 2 1 CID 85.04 5.16 1.00 1 2 812.90729 1624.80730 0.47 37.81 9130 9130 MS2 20/28 Linfeng_081211_IgG_3.raw High SLQELFLAHILSPWGAEVK 2 0 CID 85.87 5.02 1.00 1 3 713.39172 2138.16062 -1.84 50.91 5513 5513 MS2 30/72 Linfeng_091611_rIgG_3.raw High SLQELFLAHILSPWGAEVK IPI:IPI00967299.1 2 1 CID 96.55 4.72 1.00 1 3 713.39343 2138.16574 0.56 51.14 6061 6061 MS2 31/72 Linfeng_091811_SIN3A_2.raw High SDAYYcTGDVTAWTK IPI:IPI00449049.5 2 1 CID C6(Carbamidomethyl) 64.04 4.58 1.00 1 2 869.37457 1737.74187 -0.38 34.82 8077 8077 MS2 17/28 Linfeng_081211_IgG_3.raw High TTNFAGILSQGLR IPI:IPI00449049.5 2 1 CID 52.68 3.87 1.00 1 2 689.38074 1377.75420 4.10 41.61 10403 10403 MS2 18/24 Linfeng_081211_IgG_3.raw High KGDEVDGVDEVAK IPI:IPI00449049.5 1 1 CID 29.56 3.54 1.00 1 2 680.82800 1360.64873 -7.66 23.17 4030 4030 MS2 15/24 Linfeng_081211_IgG_3.raw IPI:IPI00514530.5 289 32.3 5.31 Putative uncharacterized protein ACTA1 18.34 10 4 54.49 9.00 4 2 58.67 11.07 2 2 52.48 14.88 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SYELPDGQVITIGNER IPI:IPI00021439.1;IPI:IPI00514530.5 21 2 CID 96.65 5.25 1.00 1 2 895.94556 1790.88384 -4.55 38.73 4524 4524 MS2 23/30 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 94.82 5.20 1.00 1 2 895.94635 1790.88542 -3.67 38.52 4516 4516 MS2 20/30 Linfeng_091611_rIgG_6.raw High YPIEHGIITNWDDmEK IPI:IPI00514530.5 12 1 CID M14(Oxidation) 37.83 5.06 1.00 1 3 659.63824 1976.90018 -2.91 32.46 3716 3716 MS2 21/60 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 77.67 4.64 1.00 1 2 895.94861 1790.88994 -1.15 38.51 8959 8959 MS2 17/30 Linfeng_081211_IgG_6.raw High SYELPDGQVITIGNER IPI:IPI00021439.1;IPI:IPI00514530.5 21 2 CID 51.61 4.63 1.00 1 3 597.63269 1790.88352 -4.73 38.76 4527 4527 MS2 29/60 Linfeng_091811_SIN3A_6.raw High YPIEHGIITNWDDmEK 12 0 CID M14(Oxidation) 54.89 4.62 1.00 1 3 659.63849 1976.90091 -2.54 32.37 3715 3715 MS2 25/60 Linfeng_091611_rIgG_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 58.56 4.34 1.00 1 3 597.63483 1790.88993 -1.15 38.55 8973 8973 MS2 25/60 Linfeng_081211_IgG_6.raw High IWHHTFYNELR IPI:IPI00021439.1;IPI:IPI00514530.5 34 2 CID 57.97 4.32 1.00 1 3 505.91888 1515.74210 -4.68 27.82 3092 3092 MS2 21/40 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 37.93 3.74 1.00 1 2 895.95135 1790.89543 1.92 38.15 8769 8769 MS2 16/30 Linfeng_081211_IgG_10.raw High AGFAGDDAPR IPI:IPI00894365.2 33 1 CID 8.23 3.59 1.00 1 2 488.72809 976.44890 0.56 23.28 2792 2792 MS2 15/18 Linfeng_081211_IgG_1.raw IPI:IPI00640417.1 278 31.5 9.51 "Heterochromatin protein 1, binding protein 3" 13.31 4 3 61.21 13.31 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TIPSWATLSASQLAR IPI:IPI00640417.1 5 1 CID 35.03 4.11 1.00 1 2 801.43610 1601.86492 0.17 40.83 10125 10125 MS2 16/28 Linfeng_081211_IgG_3.raw High GASGSFVVVQK IPI:IPI00640417.1 5 1 CID 41.48 3.77 1.00 1 2 539.79718 1078.58708 -1.95 27.25 5417 5417 MS2 15/20 Linfeng_081211_IgG_3.raw High LEDVLPLAFTR IPI:IPI00640417.1 6 1 CID 32.32 3.72 1.00 1 2 637.36115 1273.71501 -0.09 42.19 9878 9878 MS2 15/20 Linfeng_081211_IgG_4.raw High GASGSFVVVQK IPI:IPI00640417.1 5 1 CID 38.22 3.72 1.00 1 2 539.79785 1078.58843 -0.71 26.53 5008 5008 MS2 14/20 Linfeng_081211_IgG_4.raw IPI:IPI00642510.3 913 103.8 9.36 testis-expressed sequence 10 protein isoform 2 11.06 8 7 46.96 5.91 4 4 23.42 1.97 1 1 29.25 5.15 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLDILLEQYPALITGR IPI:IPI00642510.3 2 1 CID 69.47 5.37 1.00 1 3 605.35144 1814.03977 -1.39 47.77 5668 5668 MS2 32/60 Linfeng_091811_SIN3A_3.raw High SQNFDILQSAISK IPI:IPI00642510.3 2 1 CID 69.01 4.97 1.00 1 2 725.88055 1450.75383 0.10 38.60 9390 9390 MS2 17/24 Linfeng_081211_IgG_3.raw High NPELSTQLIDIIHTAAAR IPI:IPI00642510.3 2 1 CID 70.48 4.90 1.00 1 3 655.02454 1963.05906 -0.89 44.84 5301 5301 MS2 31/68 Linfeng_091811_SIN3A_3.raw High NPELSTQLIDIIHTAAAR 2 0 CID 71.25 4.79 1.00 1 3 655.02411 1963.05777 -1.54 44.54 4722 4722 MS2 29/68 Linfeng_091611_rIgG_3.raw High LAAVQLLQFLAPK IPI:IPI00642510.3 2 1 CID 75.27 4.28 1.00 1 2 706.43719 1411.86711 -0.08 50.76 6038 6038 MS2 17/24 Linfeng_091811_SIN3A_3.raw High IYDPQEGAVVVLPADSQQR IPI:IPI00642510.3 2 1 CID 16.74 4.26 1.00 1 3 695.69086 2085.05802 -1.53 34.84 8088 8088 MS2 29/72 Linfeng_081211_IgG_3.raw High FLQALADGSSR IPI:IPI00642510.3 2 1 CID 82.04 4.22 1.00 1 2 582.80414 1164.60100 0.15 31.43 6794 6794 MS2 17/20 Linfeng_081211_IgG_3.raw High FVTETLEDGSR IPI:IPI00642510.3 2 1 CID 42.33 3.91 1.00 1 2 627.30341 1253.59953 -1.07 29.29 5997 5997 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00646144.3 507 57.9 9.25 ATPase family AAA domain-containing protein 3A isoform 3 8.88 4 3 154.26 8.88 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLSRPQDALEGVVLSPSLEAR IPI:IPI00646144.3 3 1 CID 39.49 4.72 1.00 1 3 750.75342 2250.24570 0.16 39.25 9024 9024 MS2 19/80 Linfeng_081211_IgG_4.raw High LKEYEAAVEQLK IPI:IPI00646144.3 5 1 CID 27.80 4.24 1.00 1 3 474.26099 1420.76841 0.09 29.05 5733 5733 MS2 24/44 Linfeng_081211_IgG_4.raw High LKEYEAAVEQLK IPI:IPI00646144.3 5 1 CID 66.09 3.96 1.00 1 2 710.88708 1420.76689 -0.98 29.09 5748 5748 MS2 17/22 Linfeng_081211_IgG_4.raw High NILmYGPPGTGK IPI:IPI00646144.3 3 1 CID M4(Oxidation) 67.78 3.78 1.00 1 2 632.32202 1263.63677 -2.75 31.19 6477 6477 MS2 17/22 Linfeng_081211_IgG_4.raw IPI:IPI00745955.4 306 34.8 10.10 Probable rRNA-processing protein EBP2 14.38 6 3 51.94 14.38 4 3 20.74 7.19 1 1 32.89 7.19 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LDVTLGPVPEIGGSEAPAPQNK 4 0 CID 94.29 6.26 1.00 1 3 730.38397 2189.13736 -3.47 38.13 4446 4446 MS2 27/84 Linfeng_091811_SIN3A_6.raw High LDVTLGPVPEIGGSEAPAPQNK 4 0 CID 90.98 5.61 1.00 1 3 730.38495 2189.14029 -2.13 38.00 4449 4449 MS2 30/84 Linfeng_091611_rIgG_6.raw High LDVTLGPVPEIGGSEAPAPQNK IPI:IPI00745955.4 4 1 CID 59.77 4.77 1.00 1 3 730.38623 2189.14414 -0.38 37.94 8787 8787 MS2 26/84 Linfeng_081211_IgG_6.raw High LDVTLGPVPEIGGSEAPAPQNK IPI:IPI00745955.4 4 1 CID 114.04 4.68 1.00 1 2 1095.07568 2189.14409 -0.40 38.01 8808 8808 MS2 19/42 Linfeng_081211_IgG_6.raw High QAQAAVLAVLPR IPI:IPI00745955.4 2 1 CID 71.07 4.00 1.00 1 2 618.87427 1236.74126 -0.88 35.71 8067 8067 MS2 15/22 Linfeng_081211_IgG_6.raw High AVDPEDDFQR IPI:IPI00745955.4 3 1 CID 85.74 3.60 1.00 1 2 596.26593 1191.52458 -2.63 26.29 5006 5006 MS2 16/18 Linfeng_081211_IgG_6.raw IPI:IPI00927397.1 541 62.6 5.11 Putative uncharacterized protein MPHOSPH10 8.69 5 3 43.84 8.69 4 3 25.26 3.70 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VTFALPDDAETEDTGVLNVK IPI:IPI00927397.1 2 1 CID 70.37 5.50 1.00 1 3 712.02417 2134.05796 1.32 40.40 9985 9985 MS2 32/76 Linfeng_081211_IgG_3.raw High VTFALPDDAETEDTGVLNVK 2 0 CID 35.97 5.16 1.00 1 3 712.02161 2134.05027 -2.28 39.44 4074 4074 MS2 27/76 Linfeng_091611_rIgG_3.raw High VTFALPDDAETEDTGVLNVK IPI:IPI00927397.1 2 1 CID 125.56 4.93 1.00 1 2 1067.53113 2134.05498 -0.07 40.33 9958 9958 MS2 24/38 Linfeng_081211_IgG_3.raw High LSLAEIYEQEYIK IPI:IPI00927397.1 2 1 CID 73.36 4.49 1.00 1 2 799.92065 1598.83403 1.73 42.83 10813 10813 MS2 18/24 Linfeng_081211_IgG_3.raw High TAEEENPEHVEIQK IPI:IPI00927397.1 2 1 CID 55.26 4.07 1.00 1 2 826.89203 1652.77678 0.30 23.29 4070 4070 MS2 16/26 Linfeng_081211_IgG_3.raw IPI:IPI00939362.1 79 9.4 5.00 Putative uncharacterized protein S100A9 37.97 4 2 68.65 37.97 4 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NIETIINTFHQYSVK IPI:IPI00939362.1 2 1 CID 73.78 4.56 1.00 1 2 903.97375 1806.94023 0.95 41.38 9867 9867 MS2 17/28 Linfeng_081211_IgG_10.raw High VIEHImEDLDTNADK IPI:IPI00939362.1 2 1 CID M6(Oxidation) 55.16 4.37 1.00 1 2 879.91339 1758.81951 -1.16 27.22 5220 5220 MS2 18/28 Linfeng_081211_IgG_10.raw High VIEHIMEDLDTNADK IPI:IPI00939362.1 2 1 CID 58.55 4.27 1.00 1 2 871.91492 1742.82256 -2.34 32.74 6962 6962 MS2 18/28 Linfeng_081211_IgG_10.raw High VIEHImEDLDTNADK IPI:IPI00939362.1 2 1 CID M6(Oxidation) 45.63 4.22 1.00 1 3 586.94434 1758.81845 -1.76 26.91 5129 5129 MS2 25/56 Linfeng_081211_IgG_10.raw IPI:IPI00947128.1 292 33.0 11.84 Isoform 2 of UAP56-interacting factor 13.36 7 3 37.79 13.36 4 3 49.92 9.59 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VQAQLNTEQLLDDVVAK 4 0 CID 119.21 6.58 1.00 1 3 628.67194 1884.00125 -3.25 41.94 4936 4936 MS2 34/64 Linfeng_091811_SIN3A_6.raw High VQAQLNTEQLLDDVVAK 4 0 CID 120.26 6.39 1.00 1 2 942.50464 1884.00200 -2.85 41.99 4942 4942 MS2 26/32 Linfeng_091811_SIN3A_6.raw High VQAQLNTEQLLDDVVAK IPI:IPI00947128.1 4 1 CID 57.60 5.17 1.00 1 2 942.50641 1884.00554 -0.97 42.49 10158 10158 MS2 19/32 Linfeng_081211_IgG_6.raw High LLQQSGAQQFR 4 0 CID 68.30 4.18 1.00 1 2 638.34180 1275.67632 -3.25 24.80 2680 2680 MS2 17/20 Linfeng_091811_SIN3A_6.raw High VQAQLNTEQLLDDVVAK IPI:IPI00947128.1 4 1 CID 44.98 4.10 1.00 1 3 628.67474 1884.00968 1.22 42.46 10147 10147 MS2 18/64 Linfeng_081211_IgG_6.raw High WGIQQNSGFGK IPI:IPI00947128.1 6 1 CID 38.52 3.65 1.00 1 2 611.30072 1221.59416 -5.72 31.41 6580 6580 MS2 13/20 Linfeng_081211_IgG_6.raw High LLQQSGAQQFR IPI:IPI00947128.1 4 1 CID 45.32 3.49 1.00 1 2 638.34314 1275.67900 -1.14 25.22 4655 4655 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00003886.3 537 60.5 8.79 Isoform 2 of Guanine nucleotide-binding protein-like 3 12.85 6 5 83.78 10.80 5 4 22.75 2.05 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High cPQVEEAIVQSGQK IPI:IPI00003886.3 3 1 CID C1(Carbamidomethyl) 66.88 5.11 1.00 1 2 786.88605 1572.76482 -2.47 27.96 5367 5367 MS2 19/26 Linfeng_081211_IgG_4.raw High SGFNLEELEKNNAQSIR IPI:IPI00003886.3 3 1 CID 52.85 4.52 1.00 1 3 650.32794 1948.96927 -1.60 34.73 7607 7607 MS2 21/64 Linfeng_081211_IgG_4.raw High VIEASDVVLEVLDAR IPI:IPI00003886.3 3 1 CID 36.22 4.39 1.00 1 2 814.44971 1627.89214 1.18 48.33 11396 11396 MS2 14/28 Linfeng_081211_IgG_5.raw High ENLESWLNYLK IPI:IPI00798037.1 3 1 CID 52.55 4.35 1.00 1 2 704.85730 1408.70732 -2.43 46.49 5591 5591 MS2 17/20 Linfeng_091611_rIgG_4.raw High cPQVEEAIVQSGQK IPI:IPI00003886.3 3 1 CID C1(Carbamidomethyl) 30.45 4.26 1.00 1 3 524.92664 1572.76535 -2.13 27.99 5375 5375 MS2 22/52 Linfeng_081211_IgG_4.raw High NSLEFFTVLAQR IPI:IPI00003886.3 2 1 CID 68.24 4.24 1.00 1 2 712.88165 1424.75603 1.91 44.53 10394 10394 MS2 18/22 Linfeng_081211_IgG_4.raw IPI:IPI00014253.4 365 41.2 10.70 Ribosome biogenesis regulatory protein homolog 17.53 7 4 68.21 17.53 5 4 15.48 4.66 1 1 16.51 4.66 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DNTQLLINQLWQLPTER 1 0 CID 41.39 5.95 1.00 1 3 694.70331 2082.09537 -1.22 50.24 6167 6167 MS2 24/64 Linfeng_091811_SIN3A_5.raw High DNTQLLINQLWQLPTER 1 0 CID 36.32 5.22 1.00 1 3 694.70282 2082.09391 -1.92 49.91 5974 5974 MS2 25/64 Linfeng_091611_rIgG_5.raw High DNTQLLINQLWQLPTER IPI:IPI00014253.4 1 1 CID 68.00 4.75 1.00 1 2 1041.55713 2082.10698 4.36 49.55 11694 11694 MS2 16/32 Linfeng_081211_IgG_5.raw High TNLVWDEVSGQWR IPI:IPI00014253.4 1 1 CID 68.63 4.58 1.00 1 2 795.38757 1589.76787 -1.81 40.24 9261 9261 MS2 19/24 Linfeng_081211_IgG_5.raw High EWLIEVPGNADPLEDQFAK IPI:IPI00014253.4 1 1 CID 72.60 4.48 1.00 1 2 1086.03638 2171.06548 -0.08 45.52 10697 10697 MS2 15/36 Linfeng_081211_IgG_5.raw High DNTQLLINQLWQLPTER IPI:IPI00014253.4 1 1 CID 51.49 4.29 1.00 1 3 694.70636 2082.10453 3.18 49.52 11685 11685 MS2 25/64 Linfeng_081211_IgG_5.raw High cAGPTPEAELQALAR IPI:IPI00014253.4 1 1 CID C1(Carbamidomethyl) 46.76 4.03 1.00 1 2 792.39526 1583.78325 -0.92 36.97 8280 8280 MS2 15/28 Linfeng_081211_IgG_5.raw IPI:IPI00017451.1 793 88.8 5.22 Splicing factor 3A subunit 1 10.84 7 5 87.32 10.84 5 5 25.71 1.64 1 1 35.93 1.64 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASKPLPPAPAPDEYLVSPITGEK IPI:IPI00017451.1 3 1 CID 73.95 5.28 1.00 1 3 793.09418 2377.26798 1.22 37.65 9071 9071 MS2 24/88 Linfeng_081211_IgG_3.raw High VQAQVIQETIVPK 1 0 CID 49.41 4.76 1.00 1 2 726.92279 1452.83830 -2.63 31.44 3570 3570 MS2 21/24 Linfeng_091811_SIN3A_3.raw High VQAQVIQETIVPK IPI:IPI00017451.1 1 1 CID 67.65 4.73 1.00 1 2 726.92352 1452.83977 -1.62 32.52 7200 7200 MS2 20/24 Linfeng_081211_IgG_3.raw High VQAQVIQETIVPK 1 0 CID 53.38 4.52 1.00 1 2 726.92249 1452.83769 -3.05 31.28 3042 3042 MS2 20/24 Linfeng_091611_rIgG_3.raw High EDSAPSKPVVGIIYPPPEVR IPI:IPI00017451.1 2 1 CID 28.04 4.17 1.00 1 3 717.38733 2150.14743 -0.87 37.19 8910 8910 MS2 20/76 Linfeng_081211_IgG_3.raw High QSDDEVYAPGLDIESSLK IPI:IPI00017451.1 2 1 CID 22.52 3.71 1.00 1 2 983.46631 1965.92534 -1.78 39.03 9528 9528 MS2 13/34 Linfeng_081211_IgG_3.raw High IGEEEIQKPEEK IPI:IPI00017451.1 2 1 CID 53.61 3.70 1.00 1 2 714.86536 1428.72344 1.19 22.53 3799 3799 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00018213.5 858 98.1 7.72 Leucine-rich repeat-containing protein 8D 7.81 5 5 56.67 7.81 5 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TLNLGQNcITSLPEK IPI:IPI00018213.5 1 1 CID C8(Carbamidomethyl) 77.92 4.58 1.00 1 2 844.43683 1687.86638 -1.21 34.65 8011 8011 MS2 16/28 Linfeng_081211_IgG_3.raw High VGQLSQLTQLELK IPI:IPI00018213.5 1 1 CID 65.18 4.35 1.00 1 2 728.92236 1456.83745 0.29 38.79 9452 9452 MS2 17/24 Linfeng_081211_IgG_3.raw High NLESLYFSNNK IPI:IPI00018213.5 1 1 CID 45.70 4.07 1.00 1 2 664.82843 1328.64958 1.09 35.50 8329 8329 MS2 15/20 Linfeng_081211_IgG_3.raw High DQVVcLPVLPSPVNSK IPI:IPI00018213.5 3 1 CID C5(Carbamidomethyl) 23.54 4.01 1.00 1 2 876.47205 1751.93682 0.40 40.13 9886 9886 MS2 13/30 Linfeng_081211_IgG_3.raw High EESSFSDIPDVK IPI:IPI00018213.5 1 1 CID 45.97 3.57 1.00 1 2 676.81409 1352.62090 -0.58 32.59 7230 7230 MS2 14/22 Linfeng_081211_IgG_3.raw IPI:IPI00022974.1 146 16.6 8.05 Prolactin-inducible protein 25.34 5 3 35.53 25.34 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELGIcPDDAAVIPIK IPI:IPI00022974.1 1 1 CID C5(Carbamidomethyl) 15.79 4.41 1.00 1 2 805.92773 1610.84819 1.41 38.14 8766 8766 MS2 12/28 Linfeng_081211_IgG_10.raw High TVQIAAVVDVIR IPI:IPI00022974.1 1 1 CID 73.24 4.25 1.00 1 2 642.38831 1283.76933 0.86 39.27 9163 9163 MS2 17/22 Linfeng_081211_IgG_10.raw High ELGIcPDDAAVIPIK IPI:IPI00022974.1 1 1 CID C5(Carbamidomethyl) 21.55 3.96 1.00 1 2 805.92633 1610.84538 -0.33 38.21 9014 9014 MS2 15/28 Linfeng_081211_IgG_8.raw High ELGIcPDDAAVIPIK IPI:IPI00022974.1 1 1 CID C5(Carbamidomethyl) 2.22 3.62 1.00 1 2 805.92615 1610.84502 -0.56 38.45 8974 8974 MS2 8/28 Linfeng_081211_IgG_7.raw High FYTIEILKVE IPI:IPI00022974.1 1 1 CID 44.87 3.47 1.00 1 2 627.85284 1254.69841 0.28 41.79 10007 10007 MS2 13/18 Linfeng_081211_IgG_10.raw IPI:IPI00026167.5 128 14.2 8.46 NHP2-like protein 1 32.03 7 4 30.58 32.03 5 4 20.67 9.38 1 1 27.40 9.38 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AcGVSRPVIAcSVTIK IPI:IPI00026167.5 2 1 CID "C2(Carbamidomethyl), C11(Carbamidomethyl)" 36.37 5.01 1.00 1 2 859.45581 1717.90434 -2.63 28.21 5519 5519 MS2 18/30 Linfeng_081211_IgG_10.raw High LLDLVQQScNYK 2 0 CID C9(Carbamidomethyl) 68.44 4.92 1.00 1 2 740.87463 1480.74199 -3.04 32.99 3422 3422 MS2 19/22 Linfeng_091611_rIgG_10.raw High LLDLVQQScNYK IPI:IPI00026167.5 2 1 CID C9(Carbamidomethyl) 59.79 4.84 1.00 1 2 740.87659 1480.74590 -0.40 33.27 7168 7168 MS2 19/22 Linfeng_081211_IgG_10.raw High LLDLVQQScNYK 2 0 CID C9(Carbamidomethyl) 64.50 4.76 1.00 1 2 740.87317 1480.73906 -5.01 33.35 3640 3640 MS2 19/22 Linfeng_091811_SIN3A_10.raw High KLLDLVQQScNYK IPI:IPI00026167.5 2 1 CID C10(Carbamidomethyl) 65.31 4.58 1.00 1 2 804.92291 1608.83855 -1.81 32.64 6928 6928 MS2 17/24 Linfeng_081211_IgG_10.raw High KLLDLVQQScNYK IPI:IPI00026167.5 2 1 CID C10(Carbamidomethyl) 65.09 4.24 1.00 1 3 536.95074 1608.83768 -2.35 32.60 6913 6913 MS2 25/48 Linfeng_081211_IgG_10.raw High QQIQSIQQSIER IPI:IPI00026167.5 2 1 CID 75.81 3.73 1.00 1 2 729.38824 1457.76921 -1.04 28.28 5543 5543 MS2 16/22 Linfeng_081211_IgG_10.raw IPI:IPI00028955.4 746 83.6 6.19 Ribosome biogenesis protein BOP1 14.08 8 6 45.71 4.69 5 3 25.11 2.95 1 1 23.99 6.43 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High WVSSLAVHPAGDNVIcGSYDSK IPI:IPI00741996.8 3 1 CID C16(Carbamidomethyl) 48.42 5.79 1.00 1 3 788.04095 2362.10831 -2.12 33.32 3298 3298 MS2 24/84 Linfeng_091611_rIgG_3.raw High LALPGHAESYNPPPEYLLSEEER IPI:IPI00741996.8 3 1 CID 70.87 4.72 1.00 1 3 871.09198 2611.26139 -2.37 36.14 4186 4186 MS2 31/88 Linfeng_091811_SIN3A_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR IPI:IPI00741996.8 3 1 CID 46.48 4.43 1.00 1 3 878.13733 2632.39743 -0.30 45.76 5416 5416 MS2 29/96 Linfeng_091811_SIN3A_3.raw High LTDEQVALVR IPI:IPI00028955.4 3 1 CID 54.60 4.27 1.00 1 2 572.32086 1143.63445 -2.12 29.80 6195 6195 MS2 16/18 Linfeng_081211_IgG_3.raw High LTDEQVALVR IPI:IPI00028955.4 3 1 CID 31.57 4.13 1.00 1 2 572.32147 1143.63567 -1.05 28.95 5695 5695 MS2 16/18 Linfeng_081211_IgG_4.raw High TTEEQVQASTPcPR IPI:IPI00028955.4 1 1 CID C12(Carbamidomethyl) 49.91 3.88 1.00 1 2 802.37073 1603.73418 -2.46 23.16 4024 4024 MS2 16/26 Linfeng_081211_IgG_3.raw High LAWEQQEPGER IPI:IPI00028955.4 3 1 CID 64.62 3.74 1.00 1 2 671.82275 1342.63823 -0.33 29.05 5906 5906 MS2 14/20 Linfeng_081211_IgG_3.raw High LTDEQVALVR IPI:IPI00028955.4 3 1 CID 37.12 3.63 1.00 1 2 572.32190 1143.63652 -0.31 30.10 5772 5772 MS2 15/18 Linfeng_081211_IgG_2.raw IPI:IPI00045498.4 244 27.2 8.65 Isoform 3 of Heterogeneous nuclear ribonucleoprotein D-like 25.00 12 4 75.82 10.66 5 2 44.17 20.90 3 3 60.02 20.90 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RGFcFITYTDEEPVKK 3 0 CID C4(Carbamidomethyl) 43.22 6.71 1.00 1 3 663.99426 1989.96823 -2.87 31.79 3638 3638 MS2 27/60 Linfeng_091611_rIgG_6.raw High EYFGAFGEIENIELPmDTK 3 0 CID M16(Oxidation) 65.97 6.66 1.00 1 3 740.34521 2219.02109 -0.13 44.61 5297 5297 MS2 31/72 Linfeng_091611_rIgG_6.raw High EYFGAFGEIENIELPMDTK IPI:IPI00045498.4 3 1 CID 46.58 6.45 1.00 1 3 735.01172 2203.02060 -2.66 47.43 5624 5624 MS2 25/72 Linfeng_091811_SIN3A_6.raw High RGFcFITYTDEEPVKK IPI:IPI00045498.4 3 1 CID C4(Carbamidomethyl) 40.41 6.27 1.00 1 3 663.99408 1989.96769 -3.15 32.07 3665 3665 MS2 20/60 Linfeng_091811_SIN3A_6.raw High EYFGAFGEIENIELPmDTK IPI:IPI00045498.4 3 1 CID M16(Oxidation) 115.90 6.14 1.00 1 3 740.34357 2219.01615 -2.36 44.81 5296 5296 MS2 32/72 Linfeng_091811_SIN3A_6.raw High VFVGGLSPDTSEEQIK IPI:IPI00045498.4 3 1 CID 101.21 5.62 1.00 1 2 853.43304 1705.85881 -3.27 32.93 3779 3779 MS2 23/30 Linfeng_091811_SIN3A_6.raw High VFVGGLSPDTSEEQIK 3 0 CID 84.63 5.42 1.00 1 2 853.43311 1705.85893 -3.20 32.88 3782 3782 MS2 22/30 Linfeng_091611_rIgG_6.raw High VFVGGLSPDTSEEQIK IPI:IPI00045498.4 3 1 CID 51.52 4.68 1.00 1 2 853.43524 1705.86321 -0.69 33.26 7210 7210 MS2 16/30 Linfeng_081211_IgG_7.raw High VFVGGLSPDTSEEQIK IPI:IPI00045498.4 3 1 CID 98.96 4.23 1.00 1 2 853.43427 1705.86125 -1.84 33.08 7160 7160 MS2 21/30 Linfeng_081211_IgG_6.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 28.15 3.74 1.00 2 2 584.28827 1167.56926 -1.91 30.06 6072 6072 MS2 16/18 Linfeng_081211_IgG_7.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 51.17 3.57 1.00 2 2 584.28912 1167.57097 -0.45 30.60 6318 6318 MS2 16/18 Linfeng_081211_IgG_6.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 16.32 3.52 1.00 2 2 584.28870 1167.57012 -1.18 29.66 6137 6137 MS2 13/18 Linfeng_081211_IgG_8.raw IPI:IPI00154742.6 234 24.8 6.37 IGL@ protein 27.78 12 4 66.26 27.78 5 4 47.30 12.82 2 2 60.00 27.78 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YAASSYLSLTPEQWK 16 0 CID 121.37 6.34 1.00 1 2 872.42810 1743.84892 -5.70 39.24 4371 4371 MS2 20/28 Linfeng_091811_SIN3A_7.raw High YAASSYLSLTPEQWK 16 0 CID 109.35 5.77 1.00 1 2 872.42896 1743.85063 -4.72 38.82 4701 4701 MS2 19/28 Linfeng_091611_rIgG_8.raw High FSGSNSGNTATLTISR 5 0 CID 78.25 5.53 1.00 1 2 806.89404 1612.78081 -7.31 27.07 2840 2840 MS2 19/30 Linfeng_091811_SIN3A_8.raw High SYScQVTHEGSTVEK IPI:IPI00154742.6;IPI:IPI00887169.2 15 2 CID C4(Carbamidomethyl) 93.82 5.10 1.00 1 2 856.38464 1711.76201 1.62 19.68 3026 3026 MS2 20/28 Linfeng_081211_IgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 120.25 5.09 1.00 1 2 856.38141 1711.75554 -2.16 19.09 2031 2031 MS2 19/28 Linfeng_091611_rIgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 102.15 5.05 1.00 1 2 856.38123 1711.75517 -2.37 19.01 1728 1728 MS2 20/28 Linfeng_091811_SIN3A_8.raw High YAASSYLSLTPEQWK IPI:IPI00154742.6;IPI:IPI00887169.2 16 2 CID 72.70 4.92 1.00 1 2 872.43243 1743.85759 -0.73 38.95 9249 9249 MS2 16/28 Linfeng_081211_IgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 105.29 4.83 1.00 1 2 856.38116 1711.75505 -2.44 19.12 1670 1670 MS2 20/28 Linfeng_091811_SIN3A_7.raw High AAPSVTLFPPSSEELQANK 12 0 CID 22.09 4.63 1.00 1 3 662.67395 1986.00730 -5.36 36.17 4038 4038 MS2 24/72 Linfeng_091811_SIN3A_8.raw High AAPSVTLFPPSSEELQANK IPI:IPI00154742.6;IPI:IPI00887169.2 12 2 CID 28.90 4.44 1.00 1 2 993.51007 1986.01286 -2.56 35.74 8277 8277 MS2 11/36 Linfeng_081211_IgG_8.raw High YAASSYLSLTPEQWK IPI:IPI00154742.6;IPI:IPI00887169.2 16 2 CID 31.85 4.24 1.00 1 2 872.43298 1743.85869 -0.10 38.98 9057 9057 MS2 14/28 Linfeng_081211_IgG_10.raw High FSGSNSGNTATLTISR IPI:IPI00154742.6 5 1 CID 53.07 4.09 1.00 1 2 806.89990 1612.79253 -0.05 27.08 5301 5301 MS2 16/30 Linfeng_081211_IgG_8.raw IPI:IPI00179964.5 531 57.2 9.17 Isoform 1 of Polypyrimidine tract-binding protein 1 17.33 7 5 61.58 13.94 5 4 18.73 3.39 1 1 11.77 3.39 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IAIPGLAGAGNSVLLVSNLNPER IPI:IPI00179964.5 3 1 CID 145.74 5.80 1.00 1 2 1138.14172 2275.27617 -0.36 45.50 10689 10689 MS2 24/44 Linfeng_081211_IgG_5.raw High LPIDVTEGEVISLGLPFGK IPI:IPI00179964.5 4 1 CID 102.02 5.24 1.00 1 2 992.55463 1984.10198 0.88 48.82 11510 11510 MS2 21/36 Linfeng_081211_IgG_5.raw High VTPQSLFILFGVYGDVQR 4 0 CID 96.71 5.00 1.00 1 3 680.36987 2039.09507 -0.52 52.98 6503 6503 MS2 31/68 Linfeng_091811_SIN3A_5.raw High VTPQSLFILFGVYGDVQR IPI:IPI00413691.2 4 1 CID 85.44 4.74 1.00 1 3 680.37036 2039.09653 0.20 52.57 6302 6302 MS2 27/68 Linfeng_091611_rIgG_5.raw High NNQFQALLQYADPVSAQHAK IPI:IPI00179964.5 4 1 CID 74.90 4.73 1.00 1 3 748.37811 2243.11979 -0.29 40.44 9324 9324 MS2 26/76 Linfeng_081211_IgG_5.raw High IAIPGLAGAGNSVLLVSNLNPER IPI:IPI00179964.5 3 1 CID 45.24 4.38 1.00 1 3 759.09729 2275.27732 0.15 45.42 10662 10662 MS2 28/88 Linfeng_081211_IgG_5.raw High GQPIYIQFSNHK IPI:IPI00179964.5 4 1 CID 34.03 3.51 1.00 1 2 716.37189 1431.73650 -1.02 30.64 6182 6182 MS2 18/22 Linfeng_081211_IgG_5.raw IPI:IPI00219420.3 1217 141.5 7.18 Structural maintenance of chromosomes protein 3 8.79 12 9 166.17 5.67 5 5 172.52 6.08 6 6 87.57 0.99 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KGDVEGSQSQDEGEGSGESER IPI:IPI00219420.3 1 1 CID 110.85 6.91 1.00 1 3 722.97119 2166.89902 -1.32 2.91 284 284 MS2 35/80 Linfeng_091611_rIgG_2.raw High ALEYTIYNQELNETR IPI:IPI00219420.3 1 1 CID 101.50 5.43 1.00 1 2 928.95374 1856.90019 -1.26 34.31 3823 3823 MS2 22/28 Linfeng_091611_rIgG_2.raw High GDVEGSQSQDEGEGSGESER IPI:IPI00219420.3 1 1 CID 47.07 5.38 1.00 1 3 680.27496 2038.81034 1.68 16.52 1407 1407 MS2 24/76 Linfeng_091611_rIgG_2.raw High KAEEELGELEAK IPI:IPI00219420.3 1 1 CID 23.76 4.45 1.00 1 3 449.23059 1345.67722 -5.51 24.76 2608 2608 MS2 26/44 Linfeng_091811_SIN3A_2.raw High KGDVEGSQSQDEGEGSGESER IPI:IPI00219420.3 1 1 CID 58.53 4.41 1.00 1 3 722.97314 2166.90488 1.38 16.77 1784 1784 MS2 26/80 Linfeng_081211_IgG_2.raw High mNLPGEVTFLPLNK IPI:IPI00219420.3 1 1 CID M1(Oxidation) 45.38 4.15 1.00 1 2 794.92035 1588.83342 -4.41 39.46 4482 4482 MS2 20/26 Linfeng_091611_rIgG_2.raw High INQmATAPDSQR IPI:IPI00219420.3 1 1 CID M4(Oxidation) 50.04 4.14 1.00 1 2 674.31909 1347.63091 -0.96 15.98 1330 1330 MS2 16/22 Linfeng_091611_rIgG_2.raw High EENAEQQALAAK IPI:IPI00219420.3 1 1 CID 59.87 4.10 1.00 1 2 651.31702 1301.62676 -4.99 22.26 2208 2208 MS2 19/22 Linfeng_091611_rIgG_2.raw High EENAEQQALAAK IPI:IPI00219420.3 1 1 CID 65.49 3.74 1.00 1 2 651.31976 1301.63225 -0.77 23.79 4249 4249 MS2 15/22 Linfeng_081211_IgG_3.raw High ALEYTIYNQELNETR IPI:IPI00219420.3 1 1 CID 68.53 3.66 1.00 1 2 928.95575 1856.90422 0.91 35.74 7403 7403 MS2 14/28 Linfeng_081211_IgG_2.raw High GALTGGYYDTR IPI:IPI00219420.3 1 1 CID 64.85 3.52 1.00 1 2 587.27881 1173.55034 -2.70 28.15 5246 5246 MS2 16/20 Linfeng_081211_IgG_2.raw High VETYLNENLR IPI:IPI00219420.3 1 1 CID 41.76 3.49 1.00 1 2 625.82166 1250.63603 -1.24 30.89 5996 5996 MS2 14/18 Linfeng_081211_IgG_2.raw IPI:IPI00293078.1 796 89.8 9.28 Probable ATP-dependent RNA helicase DDX27 9.30 6 6 86.82 7.66 5 5 96.25 1.63 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IFVNSNTDVAPFLR IPI:IPI00293078.1 1 1 CID 65.82 5.28 1.00 1 2 796.92505 1592.84282 -0.23 40.84 10128 10128 MS2 17/26 Linfeng_081211_IgG_3.raw High EMQQSEAQINTAK IPI:IPI00293078.1 1 1 CID 63.22 4.15 1.00 1 2 739.34961 1477.69194 -2.21 20.01 1989 1989 MS2 18/24 Linfeng_091811_SIN3A_3.raw High DIcAcAATGTGK IPI:IPI00293078.1 1 1 CID "C3(Carbamidomethyl), C5(Carbamidomethyl)" 65.55 3.93 1.00 1 2 612.77051 1224.53374 -0.87 22.61 3829 3829 MS2 18/22 Linfeng_081211_IgG_3.raw High TVINFTmPNTIK IPI:IPI00293078.1 1 1 CID M7(Oxidation) 66.81 3.72 1.00 1 2 697.86938 1394.73149 -2.43 33.80 7685 7685 MS2 16/22 Linfeng_081211_IgG_3.raw High TAAFALPVLER IPI:IPI00293078.1 1 1 CID 25.37 3.59 1.00 1 2 594.34363 1187.67998 1.37 41.22 10260 10260 MS2 13/20 Linfeng_081211_IgG_3.raw High SVFDEELTNTSK IPI:IPI00293078.1 1 1 CID 61.94 3.47 1.00 1 2 685.32758 1369.64787 -0.25 32.74 7291 7291 MS2 18/22 Linfeng_081211_IgG_3.raw IPI:IPI00303813.5 719 81.1 6.07 Nucleolar protein 11 10.57 10 5 100.84 7.09 5 4 35.26 5.42 2 2 61.01 5.42 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DVQLLQLcLQQFPDIPESVTcAcLK IPI:IPI00303813.5 1 1 CID "C8(Carbamidomethyl), C21(Carbamidomethyl), C23(Carbamidomethyl)" 113.73 5.72 1.00 1 3 992.49225 2975.46219 -1.83 49.97 5398 5398 MS2 28/96 Linfeng_091611_rIgG_3.raw High YTLLLGQDENSVIK 1 0 CID 69.35 5.29 1.00 1 2 796.92755 1592.84783 -3.29 37.26 4330 4330 MS2 22/26 Linfeng_091811_SIN3A_3.raw High ILSVQGTEPLVLFK IPI:IPI00303813.5 1 1 CID 85.28 4.66 1.00 1 2 772.45618 1543.90508 -2.85 42.31 4440 4440 MS2 16/26 Linfeng_091611_rIgG_3.raw High ILSVQGTEPLVLFK 1 0 CID 85.64 4.60 1.00 1 2 772.45728 1543.90727 -1.43 42.51 5006 5006 MS2 19/26 Linfeng_091811_SIN3A_3.raw High YTLLLGQDENSVIK IPI:IPI00303813.5 1 1 CID 48.51 4.59 1.00 1 2 796.92963 1592.85198 -0.69 38.51 9357 9357 MS2 19/26 Linfeng_081211_IgG_3.raw High ILSVQGTEPLVLFK IPI:IPI00303813.5 1 1 CID 73.63 4.55 1.00 1 2 772.45984 1543.91240 1.89 44.08 11229 11229 MS2 18/26 Linfeng_081211_IgG_3.raw High IWNNEDVNLDK 1 0 CID 68.10 4.17 1.00 1 2 680.32861 1359.64995 -2.96 29.47 3306 3306 MS2 18/20 Linfeng_091811_SIN3A_3.raw High IWNNEDVNLDK IPI:IPI00303813.5 1 1 CID 70.59 4.14 1.00 1 2 680.33020 1359.65312 -0.63 30.84 6581 6581 MS2 18/20 Linfeng_081211_IgG_3.raw High IETVISDEEVIK IPI:IPI00303813.5 1 1 CID 22.54 3.94 1.00 1 2 687.87103 1374.73479 -1.11 33.65 7635 7635 MS2 16/22 Linfeng_081211_IgG_3.raw High IETVISDEEVIK IPI:IPI00303813.5 1 1 CID 34.06 3.84 1.00 1 2 687.87152 1374.73577 -0.40 32.89 7033 7033 MS2 17/22 Linfeng_081211_IgG_4.raw IPI:IPI00396485.3 462 50.1 9.01 Elongation factor 1-alpha 1 7.58 5 3 98.43 7.58 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IGGIGTVPVGR IPI:IPI00396485.3 7 1 CID 36.62 3.76 1.00 1 2 513.30774 1025.60820 -2.02 29.26 5668 5668 MS2 14/20 Linfeng_081211_IgG_5.raw High EHALLAYTLGVK IPI:IPI00396485.3 6 1 CID 28.86 3.67 1.00 1 2 657.87476 1314.74224 0.44 34.12 7470 7470 MS2 13/22 Linfeng_081211_IgG_10.raw High IGGIGTVPVGR IPI:IPI00396485.3 7 1 CID 29.64 3.65 1.00 1 2 513.30780 1025.60832 -1.90 30.12 6318 6318 MS2 14/20 Linfeng_081211_IgG_3.raw High YYVTIIDAPGHR IPI:IPI00396485.3 5 1 CID 41.78 3.62 1.00 1 2 702.86627 1404.72527 -1.28 31.41 6575 6575 MS2 15/22 Linfeng_081211_IgG_10.raw High EHALLAYTLGVK IPI:IPI00396485.3 6 1 CID 31.45 3.58 1.00 1 2 657.87292 1314.73857 -2.35 34.39 7502 7502 MS2 15/22 Linfeng_081211_IgG_5.raw IPI:IPI00397372.2 406 45.1 9.25 probable ATP-dependent RNA helicase DDX47 isoform 2 12.81 5 4 28.73 12.81 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TGAFALPILNALLETPQR IPI:IPI00397372.2 3 1 CID 68.28 4.35 1.00 1 2 963.04938 1925.09148 3.07 54.34 12641 12641 MS2 15/34 Linfeng_081211_IgG_5.raw High IQIEAIPLALQGR IPI:IPI00397372.2 3 1 CID 71.47 4.21 1.00 1 2 711.42664 1421.84599 -1.09 40.51 9344 9344 MS2 18/24 Linfeng_081211_IgG_5.raw High TGAFALPILNALLETPQR IPI:IPI00397372.2 3 1 CID 78.76 4.21 1.00 1 3 642.36853 1925.09104 2.84 54.39 12649 12649 MS2 23/68 Linfeng_081211_IgG_5.raw High SILLATDVASR IPI:IPI00397372.2 2 1 CID 51.54 3.81 1.00 1 2 573.32904 1145.65080 -1.50 32.82 6929 6929 MS2 17/20 Linfeng_081211_IgG_5.raw High LFALVLTPTR IPI:IPI00397372.2 3 1 CID 32.86 3.55 1.00 1 2 565.84949 1130.69170 -1.38 40.69 9407 9407 MS2 13/18 Linfeng_081211_IgG_5.raw IPI:IPI00645869.1 717 81.2 4.69 Isoform 2 of Protein LAS1 homolog 11.99 8 5 49.92 10.04 5 4 36.21 6.14 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IcSIYTQSGENSLVQEGSEASPIGK IPI:IPI00645869.1 3 1 CID C2(Carbamidomethyl) 72.45 6.83 1.00 1 3 885.42462 2654.25931 -0.83 35.63 8378 8378 MS2 29/96 Linfeng_081211_IgG_3.raw High GALQGSAWQVSSEDVR IPI:IPI00645869.1 4 1 CID 117.21 5.80 1.00 1 2 845.41302 1689.81877 -0.24 32.77 7303 7303 MS2 21/30 Linfeng_081211_IgG_3.raw High GALQGSAWQVSSEDVR IPI:IPI00645869.1 4 1 CID 94.84 5.59 1.00 1 2 845.41095 1689.81462 -2.69 31.77 3614 3614 MS2 20/30 Linfeng_091811_SIN3A_3.raw High LLDVTGGLGTDELR IPI:IPI00645869.1 4 1 CID 93.62 4.90 1.00 1 2 729.89185 1458.77641 -2.41 37.38 4345 4345 MS2 22/26 Linfeng_091811_SIN3A_3.raw High LLDVTGGLGTDELR IPI:IPI00645869.1 4 1 CID 102.59 4.82 1.00 1 2 729.89404 1458.78081 0.60 38.36 9310 9310 MS2 22/26 Linfeng_081211_IgG_3.raw High GLHSQNFTQALLER IPI:IPI00645869.1 3 1 CID 31.35 4.79 1.00 1 3 538.61700 1613.83646 -1.88 32.74 3742 3742 MS2 22/52 Linfeng_091811_SIN3A_3.raw High SGNELPLAVASTADLIR IPI:IPI00645869.1 4 1 CID 65.40 4.53 1.00 1 2 863.97131 1726.93535 1.08 43.38 11002 11002 MS2 18/32 Linfeng_081211_IgG_3.raw High LLDVTGGLGTDELR IPI:IPI00645869.1 4 1 CID 59.61 4.42 1.00 1 2 729.89374 1458.78020 0.18 37.66 8527 8527 MS2 20/26 Linfeng_081211_IgG_4.raw IPI:IPI00791325.1 684 77.2 9.69 Pumilio domain-containing protein KIAA0020 8.33 5 4 82.29 8.33 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VIQcYIQYGNEEQR IPI:IPI00791325.1 1 1 CID C4(Carbamidomethyl) 50.32 5.49 1.00 1 3 600.61658 1799.83518 -1.65 30.30 6149 6149 MS2 26/52 Linfeng_081211_IgG_4.raw High VIQcYIQYGNEEQR IPI:IPI00791325.1 1 1 CID C4(Carbamidomethyl) 85.99 5.23 1.00 1 2 900.42297 1799.83867 0.29 30.32 6156 6156 MS2 18/26 Linfeng_081211_IgG_4.raw High VFLDFFTYAPPK IPI:IPI00791325.1 1 1 CID 51.92 4.04 1.00 1 2 722.88049 1444.75371 1.76 46.74 10807 10807 MS2 15/22 Linfeng_081211_IgG_4.raw High HAEASAIVEYAYNDK IPI:IPI00791325.1 1 1 CID 21.33 3.76 1.00 1 2 840.89758 1680.78789 0.86 30.43 6200 6200 MS2 16/28 Linfeng_081211_IgG_4.raw High NmLTEELYGNTFQLYK IPI:IPI00791325.1 1 1 CID M2(Oxidation) 29.07 3.62 1.00 1 2 990.47546 1979.94365 0.85 41.63 9735 9735 MS2 16/30 Linfeng_081211_IgG_4.raw IPI:IPI00794081.1 63 7.1 7.24 Putative uncharacterized protein CSTA 19.05 5 1 48.08 19.05 5 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TQVVAGTNYYIK IPI:IPI00794081.1 2 1 CID 59.50 4.26 1.00 1 2 678.86078 1356.71428 -1.14 29.04 5789 5789 MS2 18/22 Linfeng_081211_IgG_10.raw High TQVVAGTNYYIK IPI:IPI00794081.1 2 1 CID 64.34 3.93 1.00 1 2 678.86108 1356.71489 -0.69 29.27 5815 5815 MS2 15/22 Linfeng_081211_IgG_4.raw High TQVVAGTNYYIK IPI:IPI00794081.1 2 1 CID 35.68 3.82 1.00 1 2 678.86060 1356.71391 -1.41 29.36 5826 5826 MS2 16/22 Linfeng_081211_IgG_7.raw High TQVVAGTNYYIK IPI:IPI00794081.1 2 1 CID 20.56 3.78 1.00 1 2 678.86096 1356.71465 -0.87 30.17 6334 6334 MS2 17/22 Linfeng_081211_IgG_3.raw High TQVVAGTNYYIK IPI:IPI00794081.1 2 1 CID 17.36 3.58 1.00 1 2 678.86005 1356.71282 -2.22 37.98 5640 5640 MS2 14/22 Linfeng_081211_IgG_1.raw IPI:IPI00887169.2 236 25.0 7.69 Putative uncharacterized protein 26.27 11 4 55.55 26.27 5 4 39.87 12.71 2 2 52.17 20.76 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YAASSYLSLTPEQWK 16 0 CID 121.37 6.34 1.00 1 2 872.42810 1743.84892 -5.70 39.24 4371 4371 MS2 20/28 Linfeng_091811_SIN3A_7.raw High YAASSYLSLTPEQWK 16 0 CID 109.35 5.77 1.00 1 2 872.42896 1743.85063 -4.72 38.82 4701 4701 MS2 19/28 Linfeng_091611_rIgG_8.raw High SYScQVTHEGSTVEK IPI:IPI00154742.6;IPI:IPI00887169.2 15 2 CID C4(Carbamidomethyl) 93.82 5.10 1.00 1 2 856.38464 1711.76201 1.62 19.68 3026 3026 MS2 20/28 Linfeng_081211_IgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 120.25 5.09 1.00 1 2 856.38141 1711.75554 -2.16 19.09 2031 2031 MS2 19/28 Linfeng_091611_rIgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 102.15 5.05 1.00 1 2 856.38123 1711.75517 -2.37 19.01 1728 1728 MS2 20/28 Linfeng_091811_SIN3A_8.raw High YAASSYLSLTPEQWK IPI:IPI00154742.6;IPI:IPI00887169.2 16 2 CID 72.70 4.92 1.00 1 2 872.43243 1743.85759 -0.73 38.95 9249 9249 MS2 16/28 Linfeng_081211_IgG_8.raw High SYScQVTHEGSTVEK 15 0 CID C4(Carbamidomethyl) 105.29 4.83 1.00 1 2 856.38116 1711.75505 -2.44 19.12 1670 1670 MS2 20/28 Linfeng_091811_SIN3A_7.raw High AAPSVTLFPPSSEELQANK 12 0 CID 22.09 4.63 1.00 1 3 662.67395 1986.00730 -5.36 36.17 4038 4038 MS2 24/72 Linfeng_091811_SIN3A_8.raw High AAPSVTLFPPSSEELQANK IPI:IPI00154742.6;IPI:IPI00887169.2 12 2 CID 28.90 4.44 1.00 1 2 993.51007 1986.01286 -2.56 35.74 8277 8277 MS2 11/36 Linfeng_081211_IgG_8.raw High YAASSYLSLTPEQWK IPI:IPI00154742.6;IPI:IPI00887169.2 16 2 CID 31.85 4.24 1.00 1 2 872.43298 1743.85869 -0.10 38.98 9057 9057 MS2 14/28 Linfeng_081211_IgG_10.raw High SGTSASLAISGLR IPI:IPI00887169.2 4 1 CID 49.85 3.50 1.00 1 2 610.33398 1219.66069 -2.84 30.92 6592 6592 MS2 15/24 Linfeng_081211_IgG_8.raw IPI:IPI00893099.1 641 70.4 6.29 Heat shock 70kDa protein 1-like variant 15.60 13 6 74.24 6.08 5 3 59.17 6.08 3 2 114.70 12.01 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SINPDEAVAYGAAVQAAILmGDK IPI:IPI00304925.5 12 1 CID M20(Oxidation) 300.00 7.94 1.00 1 3 774.05328 2320.14530 -1.62 47.01 5656 5656 MS2 39/88 Linfeng_091611_rIgG_4.raw High SINPDEAVAYGAAVQAAILmGDK IPI:IPI00304925.5;IPI:IPI00893099.1 12 2 CID M20(Oxidation) 114.78 7.80 1.00 1 3 774.05377 2320.14676 -0.99 47.24 5629 5629 MS2 39/88 Linfeng_091811_SIN3A_4.raw High QTQIFTTYSDNQPGVLIQVYEGER IPI:IPI00304925.5;IPI:IPI00893099.1 12 2 CID 115.31 7.51 1.00 1 3 929.45679 2786.35581 -2.67 42.44 5017 5017 MS2 31/92 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 80.11 6.06 1.00 1 3 553.96759 1659.88822 -4.26 37.76 4413 4413 MS2 38/60 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00939595.1 14 1 CID 91.33 5.73 1.00 1 3 553.96729 1659.88730 -4.81 37.39 4426 4426 MS2 33/60 Linfeng_091611_rIgG_4.raw High SINPDEAVAYGAAVQAAILMGDK IPI:IPI00304925.5 12 1 CID 73.69 5.67 1.00 1 3 768.72064 2304.14737 -2.94 49.41 5955 5955 MS2 29/88 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 94.95 5.04 1.00 1 2 830.45294 1659.89861 2.00 37.43 8442 8442 MS2 21/30 Linfeng_081211_IgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 110.08 4.99 1.00 1 2 830.44733 1659.88738 -4.77 37.78 4416 4416 MS2 25/30 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 68.16 4.89 1.00 1 3 553.97003 1659.89554 0.15 37.46 8453 8453 MS2 34/60 Linfeng_081211_IgG_4.raw High AFYPEEISSmVLTK IPI:IPI00304925.5;IPI:IPI00893099.1 5 2 CID M10(Oxidation) 56.46 4.54 1.00 1 3 544.27100 1630.79844 -3.02 38.12 4460 4460 MS2 28/52 Linfeng_091811_SIN3A_4.raw High DAGVIAGLNVLR IPI:IPI00911039.1;IPI:IPI00942823.1 9 2 CID 61.32 4.27 1.00 1 2 599.35144 1197.69560 0.44 39.68 9163 9163 MS2 19/22 Linfeng_081211_IgG_4.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 41.21 3.57 1.00 2 2 614.81689 1228.62651 -1.29 24.79 4573 4573 MS2 15/20 Linfeng_081211_IgG_3.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 15.51 3.47 1.00 2 2 614.81671 1228.62615 -1.59 24.22 4232 4232 MS2 13/20 Linfeng_081211_IgG_7.raw IPI:IPI00922068.1 493 54.7 7.52 Isoform 5 of Insulin-like growth factor 2 mRNA-binding protein 2 11.97 5 4 48.80 11.97 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVNELQNLTSAEVIVPR IPI:IPI00922068.1 6 1 CID 93.18 4.84 1.00 1 2 942.01532 1883.02336 0.01 39.27 9033 9033 MS2 17/32 Linfeng_081211_IgG_4.raw High ITISSLQDLSIYNPER IPI:IPI00922068.1 6 1 CID 47.33 4.13 1.00 1 2 924.98975 1848.97222 1.07 41.56 9715 9715 MS2 14/30 Linfeng_081211_IgG_4.raw High mVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID M1(Oxidation) 60.54 3.91 1.00 1 2 723.88593 1446.76457 -1.12 32.75 6988 6988 MS2 17/24 Linfeng_081211_IgG_4.raw High MVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID 13.15 3.83 1.00 1 2 715.88947 1430.77165 0.26 35.75 7918 7918 MS2 15/24 Linfeng_081211_IgG_4.raw High DQTPDENEEVIVR IPI:IPI00922068.1 6 1 CID 40.30 3.47 1.00 1 2 772.36420 1543.72112 -1.56 27.33 5198 5198 MS2 14/24 Linfeng_081211_IgG_4.raw IPI:IPI00922744.1 354 38.1 8.53 Complement protein C4B frameshift mutant (Fragment) 13.84 13 3 48.01 7.63 5 2 54.78 10.45 5 2 33.13 10.45 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASAGLLGAHAAAITAYALTLTK IPI:IPI00922744.1 10 1 CID 50.40 5.88 1.00 1 3 695.72662 2085.16532 -2.42 44.17 5303 5303 MS2 29/84 Linfeng_091611_rIgG_4.raw High VLSLAQEQVGGSPEK 11 0 CID 94.58 5.64 1.00 1 2 771.41034 1541.81340 -2.36 28.54 3208 3208 MS2 20/28 Linfeng_091811_SIN3A_4.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 90.75 5.62 1.00 1 2 771.41052 1541.81377 -2.12 28.34 3176 3176 MS2 21/28 Linfeng_091611_rIgG_6.raw High ASAGLLGAHAAAITAYALTLTK 10 0 CID 57.34 5.61 1.00 1 3 695.72699 2085.16642 -1.89 44.38 5242 5242 MS2 33/84 Linfeng_091811_SIN3A_3.raw High VLSLAQEQVGGSPEK 11 0 CID 89.82 5.55 1.00 1 2 771.41016 1541.81304 -2.60 28.35 3153 3153 MS2 21/28 Linfeng_091811_SIN3A_3.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 75.89 5.46 1.00 1 2 771.40991 1541.81255 -2.91 28.89 5743 5743 MS2 21/28 Linfeng_081211_IgG_6.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 74.19 5.30 1.00 1 2 771.41016 1541.81304 -2.60 29.73 6168 6168 MS2 20/28 Linfeng_081211_IgG_3.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 110.56 5.21 1.00 1 2 771.40912 1541.81096 -3.94 28.05 3195 3195 MS2 21/28 Linfeng_091611_rIgG_4.raw High ASAGLLGAHAAAITAYALTLTK IPI:IPI00922744.1 10 1 CID 55.54 5.13 1.00 1 3 695.72614 2085.16385 -3.12 44.05 4661 4661 MS2 32/84 Linfeng_091611_rIgG_3.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 78.84 5.03 1.00 1 2 771.41071 1541.81413 -1.89 28.10 2631 2631 MS2 21/28 Linfeng_091611_rIgG_3.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 79.61 4.93 1.00 1 2 771.41010 1541.81291 -2.68 28.96 5567 5567 MS2 20/28 Linfeng_081211_IgG_5.raw High VLSLAQEQVGGSPEK IPI:IPI00922744.1 11 1 CID 86.43 4.76 1.00 1 2 771.41205 1541.81682 -0.14 28.78 5640 5640 MS2 18/28 Linfeng_081211_IgG_4.raw High TEQWSTLPPETK IPI:IPI00922744.1 11 1 CID 60.67 3.86 1.00 1 2 708.85278 1416.69829 -1.62 30.28 6376 6376 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00924536.1 362 41.3 5.64 41 kDa protein 11.05 5 3 63.01 11.05 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GIYAYGFEKPSAIQQR IPI:IPI00009328.4;IPI:IPI00924536.1 14 2 CID 74.85 5.53 1.00 1 2 914.47229 1827.93730 -0.86 31.53 6444 6444 MS2 20/30 Linfeng_081211_IgG_5.raw High GYDVIAQAQSGTGK IPI:IPI00924536.1 9 1 CID 107.97 5.45 1.00 1 2 697.84845 1394.68962 -1.05 28.06 5240 5240 MS2 22/26 Linfeng_081211_IgG_5.raw High GYDVIAQAQSGTGK IPI:IPI00924536.1 9 1 CID 53.66 5.00 1.00 1 2 697.84839 1394.68950 -1.14 27.87 5393 5393 MS2 19/26 Linfeng_081211_IgG_6.raw High VLITTDLLAR IPI:IPI00924536.1 8 1 CID 66.55 3.53 1.00 1 2 557.84448 1114.68169 -1.26 37.64 8496 8496 MS2 17/18 Linfeng_081211_IgG_5.raw High VLITTDLLAR IPI:IPI00924536.1 8 1 CID 33.03 3.50 1.00 1 2 557.84570 1114.68413 0.93 37.42 8521 8521 MS2 17/18 Linfeng_081211_IgG_10.raw IPI:IPI00925702.1 811 91.0 7.24 "cDNA FLJ59523, highly similar to Scaffold attachment factor B" 12.21 11 7 143.90 7.03 5 4 43.36 3.33 2 2 65.01 6.66 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SEPVKEESSELEQPFAQDTSSVGPDR IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID 123.15 7.86 1.00 1 3 950.10571 2848.30259 -3.32 31.37 3515 3515 MS2 38/100 Linfeng_091811_SIN3A_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR 7 0 CID 154.77 7.67 1.00 1 3 950.10614 2848.30387 -2.87 31.07 3015 3015 MS2 39/100 Linfeng_091611_rIgG_3.raw High AIEDEGGNPDEIEITSEGNK IPI:IPI00925702.1 5 1 CID 142.39 5.97 1.00 1 2 1058.97876 2116.95024 -0.73 30.94 6011 6011 MS2 22/38 Linfeng_081211_IgG_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID 92.59 5.63 1.00 1 4 744.85535 2976.39956 -2.51 29.35 3242 3242 MS2 36/156 Linfeng_091811_SIN3A_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK 7 0 CID 56.47 5.06 1.00 1 4 744.85541 2976.39980 -2.43 29.12 2763 2763 MS2 36/156 Linfeng_091611_rIgG_3.raw High KFDFDAcNEVPPAPK IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID C7(Carbamidomethyl) 24.25 4.62 1.00 1 3 578.94098 1734.80838 -4.20 30.37 3381 3381 MS2 29/56 Linfeng_091811_SIN3A_2.raw High NFWVSGLSSTTR IPI:IPI00925702.1 4 1 CID 68.56 4.20 1.00 1 2 677.83936 1354.67143 -2.66 36.59 4205 4205 MS2 19/22 Linfeng_091811_SIN3A_2.raw High cYGFVTmSTAEEATK IPI:IPI00925702.1 4 1 CID "C1(Carbamidomethyl), M7(Oxidation)" 42.70 3.91 1.00 1 2 855.87152 1710.73577 0.44 31.02 6031 6031 MS2 16/28 Linfeng_081211_IgG_2.raw High ILDILGETcK IPI:IPI00005648.1;IPI:IPI00925702.1 7 2 CID C9(Carbamidomethyl) 56.51 3.90 1.00 1 2 581.31183 1161.61638 -1.78 37.18 8907 8907 MS2 14/18 Linfeng_081211_IgG_3.raw High NFWVSGLSSTTR IPI:IPI00925702.1 4 1 CID 34.47 3.78 1.00 1 2 677.84100 1354.67473 -0.23 36.94 8273 8273 MS2 16/22 Linfeng_081211_IgG_4.raw High NFWVSGLSSTTR IPI:IPI00925702.1 4 1 CID 27.73 3.67 1.00 1 2 677.84137 1354.67546 0.31 37.74 9104 9104 MS2 14/22 Linfeng_081211_IgG_3.raw IPI:IPI00927407.1 285 30.8 7.83 "cDNA FLJ59080, highly similar to Heterogeneous nuclear ribonucleoprotein A3" 28.77 22 7 117.62 11.58 5 2 128.31 24.91 9 6 97.60 19.30 8 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SSGSPYGGGYGSGGGSGGYGSR 7 0 CID 85.78 6.06 1.00 1 3 637.59912 1910.78281 -3.78 23.46 2495 2495 MS2 43/84 Linfeng_091811_SIN3A_6.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 117.02 5.87 1.00 1 3 637.59985 1910.78501 -2.63 23.33 2488 2488 MS2 42/84 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTDDSLR 8 0 CID 100.93 5.84 1.00 1 2 885.94653 1770.88579 -2.91 43.94 5188 5188 MS2 24/30 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTDDSLR IPI:IPI00927407.1 8 1 CID 99.00 5.79 1.00 1 2 885.94739 1770.88750 -1.94 43.75 5190 5190 MS2 24/30 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTDDSLR 8 0 CID 66.76 5.72 1.00 1 2 885.94690 1770.88652 -2.50 44.12 4992 4992 MS2 21/30 Linfeng_091811_SIN3A_7.raw High SSGSPYGGGYGSGGGSGGYGSR 7 0 CID 181.80 5.69 1.00 1 2 955.89551 1910.78374 -3.30 23.44 2492 2492 MS2 25/42 Linfeng_091811_SIN3A_6.raw High SSGSPYGGGYGSGGGSGGYGSR 7 0 CID 142.06 5.66 1.00 1 2 955.89539 1910.78349 -3.43 23.42 2268 2268 MS2 23/42 Linfeng_091811_SIN3A_7.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 70.29 5.53 1.00 1 3 637.60059 1910.78720 -1.48 23.62 4220 4220 MS2 31/84 Linfeng_081211_IgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 161.37 5.50 1.00 1 2 955.89734 1910.78740 -1.38 23.58 4206 4206 MS2 28/42 Linfeng_081211_IgG_6.raw High LFIGGLSFETTDDSLR IPI:IPI00927407.1 8 1 CID 83.34 5.47 1.00 1 2 885.94818 1770.88909 -1.05 43.74 5107 5107 MS2 19/30 Linfeng_091611_rIgG_7.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 143.11 5.42 1.00 1 2 955.89740 1910.78752 -1.32 24.05 4172 4172 MS2 21/42 Linfeng_081211_IgG_7.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 300.00 5.22 1.00 1 2 955.89758 1910.78789 -1.13 23.99 4039 4039 MS2 22/42 Linfeng_081211_IgG_5.raw High SSGSPYGGGYGSGGGSGGYGSR IPI:IPI00927407.1 7 1 CID 144.49 5.20 1.00 1 2 955.89624 1910.78520 -2.53 23.33 2487 2487 MS2 28/42 Linfeng_091611_rIgG_6.raw High GFAFVTFDDHDTVDK IPI:IPI00927407.1 6 1 CID 83.85 5.16 1.00 1 2 857.38910 1713.77092 -2.71 37.11 4332 4332 MS2 22/28 Linfeng_091611_rIgG_6.raw High IFVGGIKEDTEEYNLR 6 0 CID 101.69 5.08 1.00 1 3 628.32129 1882.94931 -2.81 32.66 3743 3743 MS2 33/60 Linfeng_091811_SIN3A_6.raw High IFVGGIKEDTEEYNLR 6 0 CID 54.16 5.06 1.00 1 3 628.32043 1882.94675 -4.17 32.71 3529 3529 MS2 30/60 Linfeng_091811_SIN3A_7.raw High KIFVGGIKEDTEEYNLR IPI:IPI00927407.1 6 1 CID 81.52 4.99 1.00 1 3 671.01923 2011.04312 -3.21 29.90 3385 3385 MS2 25/64 Linfeng_091611_rIgG_6.raw High IFVGGIKEDTEEYNLR IPI:IPI00927407.1 6 1 CID 115.86 4.92 1.00 1 3 628.32117 1882.94895 -3.00 32.53 3737 3737 MS2 33/60 Linfeng_091611_rIgG_6.raw High IFVGGIKEDTEEYNLR IPI:IPI00927407.1 6 1 CID 83.01 4.80 1.00 1 3 628.32184 1882.95096 -1.93 32.50 3668 3668 MS2 32/60 Linfeng_091611_rIgG_7.raw High KLFIGGLSFETTDDSLR IPI:IPI00927407.1 8 1 CID 29.99 4.56 1.00 1 3 633.66553 1898.98203 -2.04 39.66 4665 4665 MS2 27/64 Linfeng_091611_rIgG_6.raw High KLFIGGLSFETTDDSLR 8 0 CID 32.92 4.50 1.00 1 3 633.66534 1898.98148 -2.33 39.84 4666 4666 MS2 29/64 Linfeng_091811_SIN3A_6.raw High WGTLTDcVVmR IPI:IPI00927407.1 7 1 CID "C7(Carbamidomethyl), M10(Oxidation)" 55.77 3.56 1.00 1 2 677.31757 1353.62786 -0.88 32.73 7041 7041 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00929107.1 746 84.6 4.93 Seipin 7.37 11 4 108.65 5.63 5 3 23.52 1.74 1 1 71.42 5.63 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YNVLGAETVLNQMR 2 0 CID 107.73 5.58 1.00 1 2 804.41223 1607.81719 -2.42 39.62 4635 4635 MS2 24/26 Linfeng_091811_SIN3A_3.raw High YNVLGAETVLNQmR IPI:IPI00929107.1 2 1 CID M13(Oxidation) 89.13 5.07 1.00 1 2 812.41168 1623.81609 0.06 36.03 8514 8514 MS2 23/26 Linfeng_081211_IgG_3.raw High NFILDQcNVYNSGQR 2 0 CID C7(Carbamidomethyl) 79.83 4.93 1.00 1 2 914.42358 1827.83989 -2.42 34.23 3934 3934 MS2 21/28 Linfeng_091811_SIN3A_3.raw High YNVLGAETVLNQMR IPI:IPI00929107.1 2 1 CID 58.76 4.72 1.00 1 2 804.41486 1607.82244 0.85 40.99 10178 10178 MS2 17/26 Linfeng_081211_IgG_3.raw High NGEDLGVAFWISK IPI:IPI00929107.1 2 1 CID 55.72 4.70 1.00 1 2 718.36249 1435.71770 -2.77 42.52 4467 4467 MS2 20/24 Linfeng_091611_rIgG_3.raw High YNVLGAETVLNQMR 2 0 CID 3.79 4.50 1.00 1 3 536.61035 1607.81650 -2.84 39.68 4642 4642 MS2 24/52 Linfeng_091811_SIN3A_3.raw High YNVLGAETVLNQmR 2 0 CID M13(Oxidation) 70.45 4.48 1.00 1 2 812.41028 1623.81328 -1.67 35.14 4052 4052 MS2 18/26 Linfeng_091811_SIN3A_3.raw High DLLVQQASQcLSK 2 0 CID C10(Carbamidomethyl) 63.76 4.44 1.00 1 2 745.38568 1489.76409 -2.60 33.94 3896 3896 MS2 19/24 Linfeng_091811_SIN3A_3.raw High NFILDQcNVYNSGQR IPI:IPI00929107.1 2 1 CID C7(Carbamidomethyl) 46.13 4.43 1.00 1 3 609.95251 1827.84299 -0.72 35.20 8214 8214 MS2 22/56 Linfeng_081211_IgG_3.raw High NFILDQcNVYNSGQR IPI:IPI00929107.1 2 1 CID C7(Carbamidomethyl) 57.36 4.38 1.00 1 2 914.42633 1827.84538 0.58 35.16 8201 8201 MS2 18/28 Linfeng_081211_IgG_3.raw High DLLVQQASQcLSK IPI:IPI00929107.1 2 1 CID C10(Carbamidomethyl) 46.81 3.94 1.00 1 2 745.38788 1489.76848 0.35 33.97 7373 7373 MS2 14/24 Linfeng_081211_IgG_4.raw IPI:IPI00939530.1 137 15.8 9.80 "cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to SPLICING FACTOR, ARGININE/SERINE-RICH 7" 18.98 5 2 53.14 18.98 5 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NPPGFAFVEFEDPR IPI:IPI00939530.1 6 1 CID 52.62 4.41 1.00 1 2 811.38580 1621.76433 -0.18 41.98 10120 10120 MS2 18/26 Linfeng_081211_IgG_8.raw High NPPGFAFVEFEDPR IPI:IPI00939530.1 6 1 CID 60.17 3.87 1.00 1 2 811.38776 1621.76824 2.23 41.52 9913 9913 MS2 16/26 Linfeng_081211_IgG_10.raw High VYVGNLGTGAGK IPI:IPI00939530.1 6 1 CID 74.92 3.82 1.00 1 2 568.30670 1135.60613 -3.98 26.01 4913 4913 MS2 17/22 Linfeng_081211_IgG_10.raw High VYVGNLGTGAGK IPI:IPI00939530.1 6 1 CID 86.94 3.81 1.00 1 2 568.30774 1135.60820 -2.16 26.21 4885 4885 MS2 16/22 Linfeng_081211_IgG_7.raw High NPPGFAFVEFEDPR IPI:IPI00939530.1 6 1 CID 88.15 3.72 1.00 1 2 811.38745 1621.76763 1.85 41.90 10118 10118 MS2 14/26 Linfeng_081211_IgG_7.raw IPI:IPI00956305.1 95 10.2 9.33 Rheumatoid factor RF-ET11 (Fragment) 14.74 9 1 31.61 14.74 5 1 31.93 14.74 4 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ESGGGLVQPGGSLK IPI:IPI00956305.1 1 1 CID 39.57 4.31 1.00 1 2 643.34070 1285.67412 -0.48 25.23 2410 2410 MS2 17/26 Linfeng_091611_rIgG_10.raw High ESGGGLVQPGGSLK IPI:IPI00956305.1 1 1 CID 67.33 4.20 1.00 1 2 643.33917 1285.67107 -2.85 25.10 2795 2795 MS2 18/26 Linfeng_091611_rIgG_4.raw High ESGGGLVQPGGSLK 1 0 CID 52.34 4.19 1.00 1 2 643.33923 1285.67119 -2.75 25.89 4879 4879 MS2 17/26 Linfeng_081211_IgG_10.raw High ESGGGLVQPGGSLK IPI:IPI00956305.1 1 1 CID 42.38 4.19 1.00 1 2 643.33978 1285.67229 -1.90 25.44 2778 2778 MS2 18/26 Linfeng_091611_rIgG_6.raw High ESGGGLVQPGGSLK IPI:IPI00956305.1 1 1 CID 47.25 4.13 1.00 1 2 643.33929 1285.67131 -2.66 25.22 2626 2626 MS2 19/26 Linfeng_091611_rIgG_9.raw High ESGGGLVQPGGSLK 1 0 CID 19.11 4.08 1.00 1 2 643.34058 1285.67388 -0.67 25.72 4817 4817 MS2 16/26 Linfeng_081211_IgG_6.raw High ESGGGLVQPGGSLK 1 0 CID 33.60 4.02 1.00 1 2 643.34003 1285.67278 -1.52 26.12 4852 4852 MS2 16/26 Linfeng_081211_IgG_7.raw High ESGGGLVQPGGSLK 1 0 CID 30.58 3.61 1.00 1 2 643.34094 1285.67461 -0.10 25.63 4911 4911 MS2 15/26 Linfeng_081211_IgG_8.raw High ESGGGLVQPGGSLK 1 0 CID 44.57 3.51 1.00 1 2 643.34027 1285.67327 -1.14 26.10 4851 4851 MS2 16/26 Linfeng_081211_IgG_4.raw IPI:IPI00005648.1 953 107.4 6.16 Scaffold attachment factor B2 10.91 12 8 118.96 6.51 6 5 53.36 2.83 2 2 79.31 6.09 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SEPVKEESSELEQPFAQDTSSVGPDR IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID 123.15 7.86 1.00 1 3 950.10571 2848.30259 -3.32 31.37 3515 3515 MS2 38/100 Linfeng_091811_SIN3A_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR 7 0 CID 154.77 7.67 1.00 1 3 950.10614 2848.30387 -2.87 31.07 3015 3015 MS2 39/100 Linfeng_091611_rIgG_3.raw High SEPVKEESSELEQPFAQDTSSVGPDRK IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID 92.59 5.63 1.00 1 4 744.85535 2976.39956 -2.51 29.35 3242 3242 MS2 36/156 Linfeng_091811_SIN3A_2.raw High SEPVKEESSELEQPFAQDTSSVGPDRK 7 0 CID 56.47 5.06 1.00 1 4 744.85541 2976.39980 -2.43 29.12 2763 2763 MS2 36/156 Linfeng_091611_rIgG_3.raw High VTPDIEESLLEPENEK IPI:IPI00942551.1 2 1 CID 48.42 4.82 1.00 1 2 921.45135 1841.89543 -3.33 37.05 4264 4264 MS2 14/30 Linfeng_091811_SIN3A_2.raw High KFDFDAcNEVPPAPK IPI:IPI00925702.1;IPI:IPI00942551.1 7 2 CID C7(Carbamidomethyl) 24.25 4.62 1.00 1 3 578.94098 1734.80838 -4.20 30.37 3381 3381 MS2 29/56 Linfeng_091811_SIN3A_2.raw High ILDILGETcK IPI:IPI00005648.1;IPI:IPI00925702.1 7 2 CID C9(Carbamidomethyl) 56.51 3.90 1.00 1 2 581.31183 1161.61638 -1.78 37.18 8907 8907 MS2 14/18 Linfeng_081211_IgG_3.raw High NLWVSGLSSTTR IPI:IPI00005648.1 3 1 CID 46.40 3.90 1.00 1 2 660.84827 1320.68926 -1.09 36.34 8604 8604 MS2 15/22 Linfeng_081211_IgG_3.raw High NTLETSSLNFK IPI:IPI00005648.1 2 1 CID 57.62 3.71 1.00 1 2 627.32184 1253.63640 -0.68 31.89 6965 6965 MS2 17/20 Linfeng_081211_IgG_3.raw High VTPDIEESLLEPENEK IPI:IPI00005648.1 2 1 CID 94.10 3.69 1.00 1 2 921.45557 1841.90386 1.24 38.10 8071 8071 MS2 17/30 Linfeng_081211_IgG_2.raw High NTLETSSLNFK IPI:IPI00005648.1 2 1 CID 48.10 3.68 1.00 1 2 627.32269 1253.63811 0.68 32.04 6342 6342 MS2 15/20 Linfeng_081211_IgG_2.raw High AWQGAmDAGAASR IPI:IPI00005648.1 1 1 CID M6(Oxidation) 30.45 3.55 1.00 1 2 654.29382 1307.58037 0.44 22.89 3617 3617 MS2 17/24 Linfeng_081211_IgG_2.raw IPI:IPI00009328.4 411 46.8 6.73 Eukaryotic initiation factor 4A-III 26.03 11 7 111.50 15.33 6 5 46.91 7.54 2 2 56.50 14.60 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FDTLcDLYDTLTITQAVIFcNTK IPI:IPI00009328.4 1 1 CID "C5(Carbamidomethyl), C20(Carbamidomethyl)" 100.12 6.84 1.00 1 3 918.11169 2752.32053 -0.15 55.18 6762 6762 MS2 29/88 Linfeng_091811_SIN3A_5.raw High GIYAYGFEKPSAIQQR IPI:IPI00009328.4;IPI:IPI00924536.1 14 2 CID 74.85 5.53 1.00 1 2 914.47229 1827.93730 -0.86 31.53 6444 6444 MS2 20/30 Linfeng_081211_IgG_5.raw High FDTLcDLYDTLTITQAVIFcNTK IPI:IPI00009328.4 1 1 CID "C5(Carbamidomethyl), C20(Carbamidomethyl)" 80.40 5.29 1.00 1 3 918.11469 2752.32950 3.11 54.76 12762 12762 MS2 23/88 Linfeng_081211_IgG_5.raw High GRDVIAQSQSGTGK IPI:IPI00009328.4 1 1 CID 51.13 5.28 1.00 1 2 702.36530 1403.72331 -0.35 17.42 2113 2113 MS2 19/26 Linfeng_081211_IgG_5.raw High GLDVPQVSLIINYDLPNNR IPI:IPI00009328.4 1 1 CID 55.42 5.19 1.00 1 3 714.05023 2140.13614 -1.70 45.39 5408 5408 MS2 29/72 Linfeng_091611_rIgG_5.raw High YLPPATQVVLISATLPHEILEMTNK IPI:IPI00009328.4 1 1 CID 64.59 4.56 1.00 1 4 695.38361 2778.51259 0.53 53.75 6595 6595 MS2 35/144 Linfeng_091811_SIN3A_5.raw High DVIAQSQSGTGK IPI:IPI00009328.4 1 1 CID 72.89 4.21 1.00 1 2 595.80121 1190.59514 -5.10 18.36 1839 1839 MS2 19/22 Linfeng_091611_rIgG_5.raw High DVIAQSQSGTGK IPI:IPI00009328.4 1 1 CID 60.09 4.17 1.00 1 2 595.80414 1190.60100 -0.18 19.25 2880 2880 MS2 19/22 Linfeng_081211_IgG_6.raw High DVIAQSQSGTGK IPI:IPI00009328.4 1 1 CID 72.31 4.16 1.00 1 2 595.80103 1190.59477 -5.41 18.51 1913 1913 MS2 19/22 Linfeng_091811_SIN3A_5.raw High DVIAQSQSGTGK IPI:IPI00009328.4 1 1 CID 59.44 3.91 1.00 1 2 595.80292 1190.59856 -2.23 19.73 2774 2774 MS2 19/22 Linfeng_081211_IgG_5.raw High VLISTDVWAR IPI:IPI00009328.4 1 1 CID 59.39 3.50 1.00 1 2 580.32556 1159.64385 -2.76 36.01 8013 8013 MS2 17/18 Linfeng_081211_IgG_5.raw IPI:IPI00009471.1 943 106.0 6.64 WD repeat-containing protein 3 26.30 19 14 91.21 10.60 6 6 68.03 8.80 7 4 76.24 11.66 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GSSPGIQDTLEAEDGAFETDEAPEDR IPI:IPI00009471.1 1 1 CID 132.07 7.04 1.00 1 3 912.72736 2736.16751 -2.97 36.54 4238 4238 MS2 33/100 Linfeng_091811_SIN3A_3.raw High SSELEESLLVLPFSYVPDILK IPI:IPI00009471.1 1 1 CID 99.32 6.15 1.00 1 3 793.43066 2378.27744 1.35 54.92 5984 5984 MS2 26/80 Linfeng_091611_rIgG_3.raw High DTDIIVWDVINESGLYR IPI:IPI00009471.1 1 1 CID 127.92 6.06 1.00 1 2 1004.50488 2008.00249 0.10 52.63 5724 5724 MS2 25/32 Linfeng_091611_rIgG_3.raw High DTDIIVWDVINESGLYR IPI:IPI00009471.1 1 1 CID 91.44 5.63 1.00 1 2 1004.51105 2008.01482 6.24 52.61 6345 6345 MS2 20/32 Linfeng_091611_rIgG_4.raw High ILAcHGTDSVLELFcILSK IPI:IPI00009471.1 1 1 CID "C4(Carbamidomethyl), C15(Carbamidomethyl)" 51.38 5.55 1.00 1 3 726.04071 2176.10758 -3.03 49.75 5371 5371 MS2 24/72 Linfeng_091611_rIgG_3.raw High GSSPGIQDTLEAEDGAFETDEAPEDR IPI:IPI00009471.1 1 1 CID 96.34 5.30 1.00 1 3 912.73151 2736.17997 1.58 37.08 8874 8874 MS2 26/100 Linfeng_081211_IgG_3.raw High TLQLDEDVLcVSYSPNQK IPI:IPI00009471.1 1 1 CID C10(Carbamidomethyl) 25.64 5.26 1.00 1 3 703.67749 2109.01792 0.47 39.58 9700 9700 MS2 21/68 Linfeng_081211_IgG_3.raw High VWDIAYLQEIEDPEEPDPK IPI:IPI00009471.1 1 1 CID 43.40 5.18 1.00 1 3 762.69684 2286.07596 -2.35 44.77 5291 5291 MS2 29/72 Linfeng_091811_SIN3A_3.raw High TLSFSSDNIAVLSAAADSIK IPI:IPI00009471.1 1 1 CID 103.77 5.11 1.00 1 2 1005.52563 2010.04399 2.45 45.10 11557 11557 MS2 21/38 Linfeng_081211_IgG_3.raw High DTDIIVWDVINESGLYR IPI:IPI00009471.1 1 1 CID 116.63 5.05 1.00 1 3 670.00537 2008.00156 -0.36 52.58 6341 6341 MS2 29/64 Linfeng_091611_rIgG_4.raw High YVASAVFGVIGSQK IPI:IPI00009471.1 2 1 CID 72.69 5.03 1.00 1 2 713.39063 1425.77397 0.19 39.22 9588 9588 MS2 19/26 Linfeng_081211_IgG_3.raw High ILAcHGTDSVLELFcILSK IPI:IPI00009471.1 1 1 CID "C4(Carbamidomethyl), C15(Carbamidomethyl)" 46.54 5.00 1.00 1 3 726.04193 2176.11124 -1.35 50.10 5954 5954 MS2 26/72 Linfeng_091811_SIN3A_3.raw High IHFGQITSNQmLVPVIEK IPI:IPI00009471.1 1 1 CID M11(Oxidation) 24.48 4.99 1.00 1 3 690.70380 2070.09684 -4.10 35.96 4162 4162 MS2 24/68 Linfeng_091811_SIN3A_3.raw High DTDIIVWDVINESGLYR IPI:IPI00009471.1 1 1 CID 79.93 4.83 1.00 1 3 670.00482 2007.99991 -1.18 52.48 5708 5708 MS2 27/64 Linfeng_091611_rIgG_3.raw High AVFLLQNNLVELYSLNPSLPTPQPVR IPI:IPI00009471.1 1 1 CID 56.68 4.74 1.00 1 3 974.87378 2922.60678 -0.71 50.47 5461 5461 MS2 28/100 Linfeng_091611_rIgG_3.raw High SLFAHDDSVmYLQFVPK IPI:IPI00009471.1 1 1 CID M10(Oxidation) 33.00 4.65 1.00 1 3 671.66241 2012.97269 -2.99 40.37 4732 4732 MS2 22/64 Linfeng_091811_SIN3A_3.raw High LLAVSLLDcTVK IPI:IPI00009471.1 1 1 CID C9(Carbamidomethyl) 71.01 4.49 1.00 1 2 666.38501 1331.76274 1.79 42.95 10852 10852 MS2 18/22 Linfeng_081211_IgG_3.raw High TREPLILEEER IPI:IPI00009471.1 1 1 CID 29.60 4.32 1.00 1 3 462.25079 1384.73783 -3.84 27.62 3053 3053 MS2 20/40 Linfeng_091811_SIN3A_3.raw High DAITQALFLR IPI:IPI00009471.1 1 1 CID 56.58 3.86 1.00 1 2 574.32825 1147.64922 1.90 43.61 11073 11073 MS2 16/18 Linfeng_081211_IgG_3.raw IPI:IPI00020128.2 597 70.1 7.28 U3 small nucleolar RNA-associated protein 6 homolog 16.08 8 7 99.23 14.24 6 6 25.53 2.51 1 1 31.67 1.84 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IEDRLPELEQLER IPI:IPI00020128.2 1 1 CID 60.37 5.26 1.00 1 3 547.29285 1639.86399 -0.66 35.09 7726 7726 MS2 24/48 Linfeng_081211_IgG_4.raw High ELEIESQTEEQPTTK 1 0 CID 84.71 5.14 1.00 1 2 881.41754 1761.82781 -6.33 25.98 2914 2914 MS2 20/28 Linfeng_091611_rIgG_4.raw High EALEVAVAGTELFR IPI:IPI00020128.2 1 1 CID 87.08 4.80 1.00 1 2 752.90509 1504.80290 1.48 41.92 9807 9807 MS2 21/26 Linfeng_081211_IgG_4.raw High ELEIESQTEEQPTTK IPI:IPI00020128.2 1 1 CID 78.66 4.78 1.00 1 2 881.42035 1761.83342 -3.14 26.85 5070 5070 MS2 20/28 Linfeng_081211_IgG_4.raw High ALLAVIGADSVTLK IPI:IPI00020128.2 1 1 CID 41.22 4.47 1.00 1 2 685.91748 1370.82768 1.65 40.65 9450 9450 MS2 19/26 Linfeng_081211_IgG_4.raw High KDEIENSIVHR IPI:IPI00020128.2 1 1 CID 34.14 4.46 1.00 1 3 447.23544 1339.69178 -3.53 22.12 2313 2313 MS2 23/40 Linfeng_091811_SIN3A_4.raw High mLQGESAEAFVAK IPI:IPI00020128.2 1 1 CID M1(Oxidation) 41.74 4.01 1.00 1 2 698.84369 1396.68010 1.66 28.69 5609 5609 MS2 19/24 Linfeng_081211_IgG_4.raw High ASmDVENPDYSEEILK IPI:IPI00020128.2 1 1 CID M3(Oxidation) 51.97 3.89 1.00 1 2 928.41913 1855.83098 2.31 32.07 6754 6754 MS2 16/30 Linfeng_081211_IgG_4.raw IPI:IPI00021439.1 375 41.7 5.48 "Actin, cytoplasmic 1" 30.93 12 7 127.48 15.20 6 4 88.30 9.07 2 2 66.96 15.20 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TTGIVmDSGDGVTHTVPIYEGYALPHAILR IPI:IPI00021439.1 4 1 CID M6(Oxidation) 52.34 5.30 1.00 1 4 800.65387 3199.59365 -4.91 38.53 4498 4498 MS2 34/174 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00021439.1;IPI:IPI00514530.5 21 2 CID 96.65 5.25 1.00 1 2 895.94556 1790.88384 -4.55 38.73 4524 4524 MS2 23/30 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 94.82 5.20 1.00 1 2 895.94635 1790.88542 -3.67 38.52 4516 4516 MS2 20/30 Linfeng_091611_rIgG_6.raw High VAPEEHPVLLTEAPLNPK IPI:IPI00894365.2 10 1 CID 26.18 4.70 1.00 1 3 652.02478 1954.05979 -2.41 32.27 3553 3553 MS2 29/68 Linfeng_091611_rIgG_9.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 77.67 4.64 1.00 1 2 895.94861 1790.88994 -1.15 38.51 8959 8959 MS2 17/30 Linfeng_081211_IgG_6.raw High SYELPDGQVITIGNER IPI:IPI00021439.1;IPI:IPI00514530.5 21 2 CID 51.61 4.63 1.00 1 3 597.63269 1790.88352 -4.73 38.76 4527 4527 MS2 29/60 Linfeng_091811_SIN3A_6.raw High DLYANTVLSGGTTmYPGIADR IPI:IPI00894365.2 5 1 CID M14(Oxidation) 59.29 4.60 1.00 1 2 1116.03516 2231.06304 -0.87 37.97 8709 8709 MS2 16/40 Linfeng_081211_IgG_10.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 58.56 4.34 1.00 1 3 597.63483 1790.88993 -1.15 38.55 8973 8973 MS2 25/60 Linfeng_081211_IgG_6.raw High IWHHTFYNELR IPI:IPI00021439.1;IPI:IPI00514530.5 34 2 CID 57.97 4.32 1.00 1 3 505.91888 1515.74210 -4.68 27.82 3092 3092 MS2 21/40 Linfeng_091811_SIN3A_6.raw High SYELPDGQVITIGNER IPI:IPI00894365.2 21 1 CID 37.93 3.74 1.00 1 2 895.95135 1790.89543 1.92 38.15 8769 8769 MS2 16/30 Linfeng_081211_IgG_10.raw High GYSFTTTAER IPI:IPI00894365.2 5 1 CID 48.70 3.62 1.00 1 2 566.76532 1132.52336 -3.18 26.32 5012 5012 MS2 16/18 Linfeng_081211_IgG_6.raw High AGFAGDDAPR IPI:IPI00894365.2 33 1 CID 8.23 3.59 1.00 1 2 488.72809 976.44890 0.56 23.28 2792 2792 MS2 15/18 Linfeng_081211_IgG_1.raw IPI:IPI00026089.4 1304 145.7 7.09 Splicing factor 3B subunit 1 15.26 26 13 117.87 3.37 6 4 171.64 10.74 14 8 78.46 7.67 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ILVVIEPLLIDEDYYAR IPI:IPI00026089.4 1 1 CID 127.61 7.41 1.00 1 3 678.71039 2034.11661 0.37 50.22 5945 5945 MS2 37/64 Linfeng_091811_SIN3A_2.raw High ILVVIEPLLIDEDYYAR IPI:IPI00026089.4 1 1 CID 129.95 6.24 1.00 1 3 678.70886 2034.11203 -1.88 49.93 5799 5799 MS2 35/64 Linfeng_091611_rIgG_2.raw High ILVVIEPLLIDEDYYAR IPI:IPI00026089.4 1 1 CID 99.53 6.18 1.00 1 3 678.70917 2034.11295 -1.43 49.94 5394 5394 MS2 32/64 Linfeng_091611_rIgG_3.raw High NRPLSDEELDAmFPEGYK IPI:IPI00026089.4 1 1 CID M12(Oxidation) 60.47 5.81 1.00 1 3 709.65948 2126.96390 -2.87 32.22 3555 3555 MS2 31/68 Linfeng_091611_rIgG_2.raw High ILVVIEPLLIDEDYYAR IPI:IPI00026089.4 1 1 CID 124.07 5.78 1.00 1 2 1017.56158 2034.11589 0.02 50.00 5808 5808 MS2 24/32 Linfeng_091611_rIgG_2.raw High AAGLATmISTmRPDIDNmDEYVR IPI:IPI00026089.4 1 1 CID "M7(Oxidation), M11(Oxidation), M18(Oxidation)" 54.50 5.66 1.00 1 3 873.39984 2618.18497 -1.79 31.36 3443 3443 MS2 23/88 Linfeng_091611_rIgG_2.raw High DYIYAVTPLLEDALmDR IPI:IPI00026089.4 2 1 CID M15(Oxidation) 97.83 5.64 1.00 1 3 671.99890 2013.98215 -0.85 51.08 6053 6053 MS2 28/64 Linfeng_091811_SIN3A_2.raw High ILVVIEPLLIDEDYYAR IPI:IPI00026089.4 1 1 CID 133.73 5.35 1.00 1 2 1017.56006 2034.11284 -1.48 49.98 5399 5399 MS2 20/32 Linfeng_091611_rIgG_3.raw High DYIYAVTPLLEDALmDR IPI:IPI00026089.4 2 1 CID M15(Oxidation) 59.22 4.95 1.00 1 3 671.99915 2013.98288 -0.48 50.79 5908 5908 MS2 24/64 Linfeng_091611_rIgG_2.raw High AIGPHDVLATLLNNLK IPI:IPI00026089.4 2 1 CID 42.48 4.89 1.00 1 3 563.66071 1688.96756 -1.12 49.06 5691 5691 MS2 27/60 Linfeng_091611_rIgG_2.raw High AFAVVASALGIPSLLPFLK IPI:IPI00026089.4 1 1 CID 85.14 4.86 1.00 1 2 957.58179 1914.15630 5.18 54.80 6337 6337 MS2 18/36 Linfeng_091611_rIgG_2.raw High AIGPHDVLATLLNNLK IPI:IPI00026089.4 2 1 CID 26.24 4.84 1.00 1 3 563.65973 1688.96463 -2.86 49.22 5304 5304 MS2 23/60 Linfeng_091611_rIgG_3.raw High SLVEIIEHGLVDEQQK IPI:IPI00026089.4 1 1 CID 103.89 4.77 1.00 1 3 612.99414 1836.96787 -1.30 43.79 5034 5034 MS2 35/60 Linfeng_091611_rIgG_2.raw High SLVEIIEHGLVDEQQK IPI:IPI00026089.4 1 1 CID 71.03 4.74 1.00 1 3 612.99347 1836.96585 -2.39 44.02 5163 5163 MS2 33/60 Linfeng_091811_SIN3A_2.raw High DYIYAVTPLLEDALmDR IPI:IPI00026089.4 2 1 CID M15(Oxidation) 84.95 4.69 1.00 1 3 671.99823 2013.98014 -1.85 50.87 5509 5509 MS2 23/64 Linfeng_091611_rIgG_3.raw High DYIYAVTPLLEDALmDR IPI:IPI00026089.4 2 1 CID M15(Oxidation) 47.55 4.64 1.00 1 2 1007.49432 2013.98137 -1.23 50.85 5915 5915 MS2 13/32 Linfeng_091611_rIgG_2.raw High AFAVVASALGIPSLLPFLK IPI:IPI00026089.4 1 1 CID 80.80 4.52 1.00 1 3 638.72021 1914.14609 -0.16 54.84 6477 6477 MS2 33/72 Linfeng_091811_SIN3A_2.raw High AIGPHDVLATLLNNLK IPI:IPI00026089.4 2 1 CID 29.70 4.41 1.00 1 3 563.66064 1688.96738 -1.23 49.32 5829 5829 MS2 27/60 Linfeng_091811_SIN3A_2.raw High WDQTADQTPGATPK IPI:IPI00026089.4 1 1 CID 42.89 4.37 1.00 1 2 758.35590 1515.70452 -1.96 22.73 2273 2273 MS2 17/26 Linfeng_091611_rIgG_2.raw High GGDSIGETPTPGASK IPI:IPI00026089.4 1 1 CID 53.75 4.09 1.00 1 2 687.32898 1373.65068 -2.70 21.13 2106 2106 MS2 16/28 Linfeng_091811_SIN3A_2.raw High VQENcIDLVGR IPI:IPI00026089.4 2 1 CID C5(Carbamidomethyl) 49.98 3.93 1.00 1 2 651.82544 1302.64360 -2.70 30.46 6447 6447 MS2 16/20 Linfeng_081211_IgG_3.raw High QLVDTTVELANK IPI:IPI00026089.4 1 1 CID 51.04 3.87 1.00 1 2 665.86414 1330.72099 -0.25 31.68 6885 6885 MS2 16/22 Linfeng_081211_IgG_3.raw High VGAAEIISR IPI:IPI00026089.4 1 1 CID 31.94 3.72 1.00 1 2 458.26587 915.52446 -1.53 27.43 5047 5047 MS2 15/16 Linfeng_081211_IgG_2.raw High VQENcIDLVGR IPI:IPI00026089.4 2 1 CID C5(Carbamidomethyl) 39.32 3.59 1.00 1 2 651.82715 1302.64702 -0.08 30.73 5956 5956 MS2 14/20 Linfeng_081211_IgG_2.raw High VGAAEIISR IPI:IPI00026089.4 1 1 CID 36.85 3.57 1.00 1 2 458.26578 915.52428 -1.73 27.14 5376 5376 MS2 14/16 Linfeng_081211_IgG_3.raw High VPELNVQNGVLK IPI:IPI00026089.4 2 1 CID 37.44 3.50 1.00 1 2 655.37640 1309.74553 -1.50 33.49 7573 7573 MS2 11/22 Linfeng_081211_IgG_3.raw IPI:IPI00215637.5 662 73.2 7.18 ATP-dependent RNA helicase DDX3X 17.37 13 8 94.56 12.24 6 6 72.38 9.52 4 4 58.06 7.70 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TAAFLLPILSQIYSDGPGEALR IPI:IPI00215637.5 2 1 CID 129.10 7.70 1.00 1 3 778.09229 2332.26230 3.20 54.62 6546 6546 MS2 38/84 Linfeng_091611_rIgG_4.raw High TAAFLLPILSQIYSDGPGEALR 2 0 CID 136.37 7.14 1.00 1 3 778.09039 2332.25663 0.77 54.70 6358 6358 MS2 30/84 Linfeng_091811_SIN3A_4.raw High VRPcVVYGGADIGQQIR 3 0 CID C4(Carbamidomethyl) 60.70 6.56 1.00 1 3 629.99792 1887.97922 -3.52 29.99 3405 3405 MS2 33/64 Linfeng_091811_SIN3A_4.raw High VRPcVVYGGADIGQQIR IPI:IPI00215637.5 3 1 CID C4(Carbamidomethyl) 78.83 5.61 1.00 1 3 629.99725 1887.97721 -4.59 29.70 3419 3419 MS2 34/64 Linfeng_091611_rIgG_4.raw High VRPcVVYGGADIGQQIR IPI:IPI00215637.5 3 1 CID C4(Carbamidomethyl) 73.09 4.86 1.00 1 3 630.00043 1887.98673 0.46 30.41 6190 6190 MS2 33/64 Linfeng_081211_IgG_4.raw High SFLLDLLNATGK IPI:IPI00215637.5 1 1 CID 76.52 4.72 1.00 1 2 646.36536 1291.72344 -1.75 48.90 5890 5890 MS2 19/22 Linfeng_091611_rIgG_4.raw High LEQELFSGGNTGINFEK IPI:IPI00215637.5 6 1 CID 75.47 4.69 1.00 1 2 941.96338 1882.91948 0.67 37.16 8348 8348 MS2 20/32 Linfeng_081211_IgG_4.raw High SPILVATAVAAR IPI:IPI00215637.5 3 1 CID 70.17 4.51 1.00 1 2 584.85370 1168.70012 -4.09 32.27 3759 3759 MS2 18/22 Linfeng_091611_rIgG_4.raw High SFLLDLLNATGK 1 0 CID 89.67 4.43 1.00 1 2 646.36530 1291.72331 -1.84 49.16 5834 5834 MS2 19/22 Linfeng_091811_SIN3A_4.raw High SPILVATAVAAR IPI:IPI00215637.5 3 1 CID 66.25 3.97 1.00 1 2 584.85516 1168.70305 -1.58 33.04 7086 7086 MS2 17/22 Linfeng_081211_IgG_4.raw High ELAVQIYEEAR IPI:IPI00215637.5 3 1 CID 39.89 3.86 1.00 1 2 660.84320 1320.67912 -0.25 34.25 7465 7465 MS2 14/20 Linfeng_081211_IgG_4.raw High VGNLGLATSFFNER IPI:IPI00215637.5 1 1 CID 85.98 3.81 1.00 1 2 762.89410 1524.78093 0.22 41.25 9632 9632 MS2 16/26 Linfeng_081211_IgG_4.raw High DLLDLLVEAK IPI:IPI00215637.5 4 1 CID 16.52 3.66 1.00 1 2 564.82904 1128.65080 -0.29 49.69 11188 11188 MS2 15/18 Linfeng_081211_IgG_4.raw IPI:IPI00290410.3 810 90.6 5.97 Deoxynucleotidyltransferase terminal-interacting protein 2 9.51 10 5 71.71 6.79 6 4 66.11 7.65 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLSEINKPNFYNNDFDDDFSHR IPI:IPI00290410.3 2 1 CID 61.81 4.86 1.00 1 3 892.06262 2674.17331 -2.70 34.32 3946 3946 MS2 25/84 Linfeng_091811_SIN3A_3.raw High ASIQAASAESSGQK IPI:IPI00290410.3 2 1 CID 63.40 4.80 1.00 1 2 667.83063 1334.65398 -0.55 17.57 1642 1642 MS2 19/26 Linfeng_091811_SIN3A_3.raw High SLTQTFATVEVGR IPI:IPI00290410.3 2 1 CID 82.93 4.61 1.00 1 2 704.87292 1408.73857 -3.24 34.13 3922 3922 MS2 20/24 Linfeng_091811_SIN3A_3.raw High LTSSSIDPGLSIK IPI:IPI00290410.3 1 1 CID 45.51 4.50 1.00 1 2 659.36475 1317.72222 -2.93 31.52 3580 3580 MS2 20/24 Linfeng_091811_SIN3A_3.raw High SLTQTFATVEVGR IPI:IPI00290410.3 2 1 CID 71.00 4.28 1.00 1 2 704.87543 1408.74358 0.32 35.24 8231 8231 MS2 18/24 Linfeng_081211_IgG_3.raw High LTSSSIDPGLSIK IPI:IPI00290410.3 1 1 CID 32.41 4.18 1.00 1 2 659.36609 1317.72490 -0.90 32.79 7312 7312 MS2 16/24 Linfeng_081211_IgG_3.raw High SLTQTFATVEVGR IPI:IPI00290410.3 2 1 CID 55.25 3.94 1.00 1 2 704.87390 1408.74053 -1.85 34.47 7530 7530 MS2 15/24 Linfeng_081211_IgG_4.raw High ASIQAASAESSGQK IPI:IPI00290410.3 2 1 CID 53.50 3.90 1.00 1 2 667.83203 1334.65679 1.55 19.41 2730 2730 MS2 17/26 Linfeng_081211_IgG_3.raw High SLTQTFATVEVGR IPI:IPI00290410.3 2 1 CID 53.68 3.77 1.00 1 2 704.87524 1408.74321 0.06 35.41 8292 8292 MS2 17/24 Linfeng_081211_IgG_3.raw High QIVGTPVNSEDSDTR IPI:IPI00290410.3 2 1 CID 27.12 3.76 1.00 1 2 809.38873 1617.77019 -0.84 25.38 4779 4779 MS2 12/28 Linfeng_081211_IgG_3.raw IPI:IPI00290952.7 758 84.4 9.76 Isoform 1 of Ribosomal RNA processing protein 1 homolog B 11.74 7 6 59.45 11.74 6 6 22.12 1.85 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VFcVEEEDSESSLQK IPI:IPI00290952.7 3 1 CID C3(Carbamidomethyl) 78.27 4.67 1.00 1 2 893.39471 1785.78215 -1.49 30.41 6432 6432 MS2 21/28 Linfeng_081211_IgG_3.raw High EVLcPESQSPNGVR IPI:IPI00290952.7 2 1 CID C4(Carbamidomethyl) 45.37 4.38 1.00 1 2 786.37598 1571.74468 -2.31 25.99 4983 4983 MS2 16/26 Linfeng_081211_IgG_3.raw High TPTSSPASSPLVAK 2 0 CID 55.12 4.29 1.00 1 2 671.86273 1342.71819 -2.34 23.70 2505 2505 MS2 19/26 Linfeng_091811_SIN3A_3.raw High VGDGDLSAEEIPENEVSLR IPI:IPI00290952.7 2 1 CID 84.75 4.19 1.00 1 2 1014.98932 2028.97136 -0.38 35.06 8170 8170 MS2 16/36 Linfeng_081211_IgG_3.raw High TPTSSPASSPLVAK IPI:IPI00290952.7 2 1 CID 87.06 4.11 1.00 1 2 671.86322 1342.71916 -1.61 25.24 4728 4728 MS2 13/26 Linfeng_081211_IgG_3.raw High AGPGSLELcGLPSQK IPI:IPI00290952.7 2 1 CID C9(Carbamidomethyl) 37.74 4.00 1.00 1 2 757.38586 1513.76445 -2.33 33.80 7684 7684 MS2 17/28 Linfeng_081211_IgG_3.raw High ETGGFSQEELLK IPI:IPI00290952.7 1 1 CID 41.78 3.59 1.00 1 2 669.33264 1337.65801 -0.30 32.80 7315 7315 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00385042.4 634 73.9 9.50 Nucleolar GTP-binding protein 1 8.68 7 5 104.65 8.68 6 5 46.22 2.05 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LSQILTDFPK IPI:IPI00385042.4 2 1 CID 61.91 4.18 1.00 1 2 581.32813 1161.64897 -2.13 36.13 8017 8017 MS2 16/18 Linfeng_081211_IgG_4.raw High TLLLcGYPNVGK IPI:IPI00385042.4 2 1 CID C5(Carbamidomethyl) 38.50 4.13 1.00 1 2 667.86047 1334.71367 -0.05 36.37 8613 8613 MS2 15/22 Linfeng_081211_IgG_3.raw High ADVDVQPYAFTTK 1 0 CID 75.17 4.08 1.00 1 2 727.85950 1454.71172 -3.11 32.17 3746 3746 MS2 16/24 Linfeng_091611_rIgG_4.raw High ADVDVQPYAFTTK IPI:IPI00385042.4 1 1 CID 68.17 3.93 1.00 1 2 727.86139 1454.71550 -0.51 33.43 7549 7549 MS2 16/24 Linfeng_081211_IgG_3.raw High ADVDVQPYAFTTK IPI:IPI00385042.4 1 1 CID 54.01 3.80 1.00 1 2 727.86182 1454.71636 0.08 32.63 6944 6944 MS2 15/24 Linfeng_081211_IgG_4.raw High IAELSEDDQK IPI:IPI00385042.4 1 1 CID 61.87 3.49 1.00 1 2 574.27606 1147.54485 -2.56 23.05 3993 3993 MS2 16/18 Linfeng_081211_IgG_3.raw High LALGQINIAK IPI:IPI00385042.4 2 1 CID 47.07 3.47 1.00 1 2 520.82678 1040.64629 -0.02 34.82 8078 8078 MS2 16/18 Linfeng_081211_IgG_3.raw IPI:IPI00400922.5 1871 208.6 8.87 Protein RRP5 homolog 5.99 14 9 207.45 3.21 6 5 184.49 4.33 6 6 90.43 1.87 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SIKDYGVFIQFPSGLSGLAPK IPI:IPI00400922.5 1 1 CID 35.60 5.83 1.00 1 3 742.07086 2224.19803 -1.48 44.45 5115 5115 MS2 32/80 Linfeng_091611_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK IPI:IPI00400922.5 1 1 CID 65.26 5.79 1.00 1 3 608.67426 1824.00821 -1.75 43.93 5051 5051 MS2 32/72 Linfeng_091611_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK 1 0 CID 58.12 5.48 1.00 1 3 608.67389 1824.00711 -2.36 44.28 5196 5196 MS2 23/72 Linfeng_091811_SIN3A_2.raw High DYGVFIQFPSGLSGLAPK IPI:IPI00400922.5 1 1 CID 54.84 5.02 1.00 1 2 948.49731 1895.98735 -1.53 48.20 5583 5583 MS2 16/34 Linfeng_091611_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK IPI:IPI00400922.5 1 1 CID 64.26 4.99 1.00 1 2 912.51013 1824.01299 0.86 50.22 9097 9097 MS2 20/36 Linfeng_081211_IgG_1.raw High IIDYSQMDELALLSLR IPI:IPI00400922.5 1 1 CID 25.92 4.83 1.00 1 3 627.33063 1879.97733 -3.26 48.11 5573 5573 MS2 21/60 Linfeng_091611_rIgG_2.raw High SKVEDPEINSIQDIK IPI:IPI00400922.5 1 1 CID 66.88 4.76 1.00 1 3 572.29767 1714.87845 -4.31 28.52 3066 3066 MS2 26/56 Linfeng_091611_rIgG_2.raw High IIDYSQMDELALLSLR 1 0 CID 28.16 4.31 1.00 1 3 627.33197 1879.98136 -1.12 48.33 5733 5733 MS2 21/60 Linfeng_091811_SIN3A_1.raw High TSIIEAQYLR IPI:IPI00400922.5 1 1 CID 53.99 4.14 1.00 1 2 597.32800 1193.64873 -3.16 32.69 3615 3615 MS2 16/18 Linfeng_091611_rIgG_2.raw High TSIIEAQYLR IPI:IPI00400922.5 1 1 CID 49.85 3.80 1.00 1 2 597.32941 1193.65154 -0.81 34.10 7795 7795 MS2 16/18 Linfeng_081211_IgG_3.raw High FQEAGELYNR IPI:IPI00400922.5 1 1 CID 59.76 3.73 1.00 1 2 613.79095 1226.57463 -4.43 28.32 5270 5270 MS2 15/18 Linfeng_081211_IgG_2.raw High AINIGQLVDVK IPI:IPI00400922.5 1 1 CID 54.49 3.69 1.00 1 2 585.34875 1169.69023 1.13 46.67 8176 8176 MS2 16/20 Linfeng_081211_IgG_1.raw High AGQEVESGQK IPI:IPI00400922.5 1 1 CID 39.30 3.54 1.00 1 2 516.75354 1032.49980 3.99 12.87 911 911 MS2 14/18 Linfeng_081211_IgG_2.raw High AINIGQLVDVK IPI:IPI00400922.5 1 1 CID 42.92 3.53 1.00 1 2 585.34680 1169.68633 -2.21 39.46 9663 9663 MS2 15/20 Linfeng_081211_IgG_3.raw IPI:IPI00413611.1 765 90.7 9.31 DNA topoisomerase 1 9.28 6 6 151.95 9.28 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AGNEKEEGETADTVGccSLR IPI:IPI00413611.1 1 1 CID "C16(Carbamidomethyl), C17(Carbamidomethyl)" 67.13 5.96 1.00 1 3 728.31372 2182.92661 -3.41 24.24 4387 4387 MS2 31/76 Linfeng_081211_IgG_3.raw High EEGETADTVGccSLR IPI:IPI00413611.1 1 1 CID "C11(Carbamidomethyl), C12(Carbamidomethyl)" 94.97 4.77 1.00 1 2 842.34912 1683.69097 -2.37 25.80 4920 4920 MS2 20/28 Linfeng_081211_IgG_3.raw High TYNASITLQQQLK IPI:IPI00413611.1 1 1 CID 52.50 4.58 1.00 1 2 754.40802 1507.80876 -1.83 32.31 7121 7121 MS2 17/24 Linfeng_081211_IgG_3.raw High DEDDADYKPK IPI:IPI00413611.1 1 1 CID 58.51 4.06 1.00 1 2 598.26001 1195.51274 1.13 18.22 2344 2344 MS2 15/18 Linfeng_081211_IgG_3.raw High GPVFAPPYEPLPENVK IPI:IPI00413611.1 1 1 CID 87.07 3.93 1.00 1 2 877.46130 1753.91533 -0.40 38.24 9273 9273 MS2 18/30 Linfeng_081211_IgG_3.raw High LEVQATDREENK IPI:IPI00413611.1 1 1 CID 33.53 3.70 1.00 1 2 716.35797 1431.70867 0.83 19.79 2857 2857 MS2 15/22 Linfeng_081211_IgG_3.raw IPI:IPI00651653.1 652 72.5 8.68 Isoform 3 of Probable ATP-dependent RNA helicase DDX17 11.50 13 6 101.67 7.36 6 4 102.40 5.98 3 3 71.28 5.98 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SSQSSSQQFSGIGR IPI:IPI00651653.1 8 1 CID 84.71 4.68 1.00 1 2 728.34283 1455.67839 -2.69 23.97 2543 2543 MS2 20/26 Linfeng_091811_SIN3A_3.raw High SSQSSSQQFSGIGR IPI:IPI00651653.1 8 1 CID 91.53 4.62 1.00 1 2 728.34088 1455.67449 -5.38 23.62 2587 2587 MS2 20/26 Linfeng_091611_rIgG_4.raw High SSQSSSQQFSGIGR IPI:IPI00651653.1 8 1 CID 84.84 4.56 1.00 1 2 728.34302 1455.67876 -2.44 24.08 2590 2590 MS2 21/26 Linfeng_091811_SIN3A_4.raw High GTAYTFFTPGNLK IPI:IPI00651653.1 6 1 CID 31.01 4.30 1.00 1 2 708.85864 1416.71001 -4.12 37.47 4436 4436 MS2 14/24 Linfeng_091611_rIgG_4.raw High GDGPIcLVLAPTR IPI:IPI00651653.1 10 1 CID C6(Carbamidomethyl) 97.29 4.19 1.00 1 2 684.86658 1368.72588 -3.36 38.31 4484 4484 MS2 14/24 Linfeng_091811_SIN3A_4.raw High APILIATDVASR IPI:IPI00651653.1 10 1 CID 109.90 4.12 1.00 1 2 613.85718 1226.70708 -2.69 32.85 3781 3781 MS2 18/22 Linfeng_091811_SIN3A_4.raw High DmVGIAQTGSGK IPI:IPI00651653.1 7 1 CID M2(Oxidation) 86.92 4.08 1.00 1 2 590.28558 1179.56389 -3.05 20.19 2107 2107 MS2 19/22 Linfeng_091611_rIgG_4.raw High DmVGIAQTGSGK IPI:IPI00879638.2 7 1 CID M2(Oxidation) 25.90 3.91 1.00 1 2 590.28790 1179.56853 0.88 21.23 3258 3258 MS2 16/22 Linfeng_081211_IgG_4.raw High APILIATDVASR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID 99.79 3.83 1.00 1 2 613.85901 1226.71074 0.29 34.13 7806 7806 MS2 18/22 Linfeng_081211_IgG_3.raw High GDGPIcLVLAPTR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID C6(Carbamidomethyl) 30.24 3.69 1.00 1 2 684.86987 1368.73247 1.46 38.19 8694 8694 MS2 12/24 Linfeng_081211_IgG_4.raw High cTYLVLDEADR IPI:IPI00879638.2 7 1 CID C1(Carbamidomethyl) 54.06 3.59 1.00 1 2 677.81860 1354.62993 -0.64 33.74 7299 7299 MS2 16/20 Linfeng_081211_IgG_4.raw High APILIATDVASR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID 80.40 3.58 1.00 1 2 613.85797 1226.70867 -1.40 33.12 7104 7104 MS2 14/22 Linfeng_081211_IgG_4.raw High DmVGIAQTGSGK IPI:IPI00879638.2 7 1 CID M2(Oxidation) 27.06 3.48 1.00 1 2 590.28693 1179.56658 -0.77 22.11 3653 3653 MS2 14/22 Linfeng_081211_IgG_3.raw IPI:IPI00748303.3 1056 115.1 9.28 Putative uncharacterized protein ZFR 8.33 6 6 86.23 8.33 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AGYSQGATQYTQAQQTR IPI:IPI00748303.3 2 1 CID 72.63 4.77 1.00 1 2 929.93872 1858.87016 1.23 23.87 3943 3943 MS2 18/32 Linfeng_081211_IgG_2.raw High AISSASSPQSPGDALR IPI:IPI00748303.3 2 1 CID 61.45 4.34 1.00 1 2 772.38794 1543.76860 -1.65 26.13 5033 5033 MS2 19/30 Linfeng_081211_IgG_3.raw High EDITSSAQFALR IPI:IPI00748303.3 1 1 CID 68.37 4.12 1.00 1 2 669.33990 1337.67253 2.17 34.36 7899 7899 MS2 18/22 Linfeng_081211_IgG_3.raw High GLTTTGNSSLNSTSNTK IPI:IPI00748303.3 2 1 CID 86.15 4.11 1.00 1 2 841.91351 1682.81975 0.33 22.70 3860 3860 MS2 15/32 Linfeng_081211_IgG_3.raw High STPVTSAVQIPEVK IPI:IPI00748303.3 2 1 CID 38.19 3.78 1.00 1 2 728.40582 1455.80437 -0.71 33.31 7505 7505 MS2 12/26 Linfeng_081211_IgG_3.raw High LcEcSFNDPNAK IPI:IPI00748303.3 2 1 CID "C2(Carbamidomethyl), C4(Carbamidomethyl)" 42.07 3.76 1.00 1 2 727.80591 1454.60454 0.41 25.95 4595 4595 MS2 13/22 Linfeng_081211_IgG_2.raw IPI:IPI00795527.1 185 20.8 7.40 21 kDa protein 25.95 18 1 114.37 25.95 6 1 62.52 25.95 5 1 76.17 25.95 7 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TITLEVEPSDTIENVK 24 0 CID 99.70 5.44 1.00 1 2 894.46417 1787.92107 -3.53 34.95 4106 4106 MS2 20/30 Linfeng_091611_rIgG_4.raw High TITLEVEPSDTIENVK 24 0 CID 93.77 5.40 1.00 1 2 894.46472 1787.92217 -2.92 35.07 3919 3919 MS2 21/30 Linfeng_091611_rIgG_2.raw High TITLEVEPSDTIENVK 24 0 CID 51.14 5.40 1.00 1 2 894.46454 1787.92180 -3.12 34.98 4193 4193 MS2 22/30 Linfeng_091611_rIgG_8.raw High TITLEVEPSDTIENVK 24 0 CID 87.73 5.38 1.00 1 2 894.46478 1787.92229 -2.85 35.30 4033 4033 MS2 22/30 Linfeng_091811_SIN3A_2.raw High TITLEVEPSDTIENVK 24 0 CID 100.08 5.31 1.00 1 2 894.46515 1787.92302 -2.44 34.94 3500 3500 MS2 21/30 Linfeng_091611_rIgG_3.raw High TITLEVEPSDTIENVK 24 0 CID 48.60 5.26 1.00 1 2 894.46588 1787.92449 -1.62 35.17 4056 4056 MS2 22/30 Linfeng_091811_SIN3A_3.raw High TITLEVEPSDTIENVK 24 0 CID 49.86 5.24 1.00 1 2 894.46442 1787.92156 -3.26 35.04 4030 4030 MS2 22/30 Linfeng_091811_SIN3A_1.raw High TITLEVEPSDTIENVK 24 0 CID 88.47 5.21 1.00 1 2 894.46490 1787.92253 -2.71 35.33 3930 3930 MS2 22/30 Linfeng_091811_SIN3A_8.raw High TITLEVEPSDTIENVK 24 0 CID 47.93 5.15 1.00 1 2 894.46497 1787.92266 -2.64 35.18 4080 4080 MS2 19/30 Linfeng_091611_rIgG_6.raw High TITLEVEPSDTIENVK 24 0 CID 56.89 5.13 1.00 1 2 894.46472 1787.92217 -2.92 35.33 4099 4099 MS2 21/30 Linfeng_091811_SIN3A_4.raw High TITLEVEPSDTIENVK 24 0 CID 49.00 5.04 1.00 1 2 894.46448 1787.92168 -3.19 35.32 4083 4083 MS2 21/30 Linfeng_091811_SIN3A_6.raw High TITLEVEPSDTIENVK 24 0 CID 63.35 4.97 1.00 1 3 596.64496 1787.92032 -3.95 35.40 3939 3939 MS2 28/60 Linfeng_091811_SIN3A_8.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 55.67 4.94 1.00 1 2 894.46600 1787.92473 -1.48 34.90 8009 8009 MS2 20/30 Linfeng_081211_IgG_8.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 53.96 4.70 1.00 1 2 894.46747 1787.92766 0.16 35.99 8500 8500 MS2 17/30 Linfeng_081211_IgG_3.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 30.20 4.66 1.00 1 2 894.46759 1787.92790 0.29 35.37 7962 7962 MS2 12/30 Linfeng_081211_IgG_6.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 52.48 4.46 1.00 1 2 894.46802 1787.92876 0.77 35.23 7779 7779 MS2 19/30 Linfeng_081211_IgG_4.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 26.83 4.11 1.00 1 2 894.46710 1787.92693 -0.25 34.97 7759 7759 MS2 14/30 Linfeng_081211_IgG_10.raw High TITLEVEPSDTIENVK IPI:IPI00795527.1 24 1 CID 14.49 3.99 1.00 1 2 894.46759 1787.92790 0.29 35.41 7975 7975 MS2 12/30 Linfeng_081211_IgG_7.raw IPI:IPI00909509.1 194 21.7 6.35 "cDNA FLJ59138, highly similar to Annexin A2" 23.71 6 4 80.97 23.71 6 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLYYYIQQDTK IPI:IPI00909509.1 5 1 CID 60.16 4.12 1.00 1 2 711.34875 1421.69023 -3.16 34.47 7652 7652 MS2 14/20 Linfeng_081211_IgG_6.raw High GVDEVTIVNILTNR IPI:IPI00909509.1 4 1 CID 44.06 3.87 1.00 1 2 771.92847 1542.84966 0.64 44.75 10905 10905 MS2 13/26 Linfeng_081211_IgG_10.raw High DALNIETAIK IPI:IPI00909509.1 6 1 CID 20.74 3.84 1.00 1 2 544.30383 1087.60039 0.89 34.20 7547 7547 MS2 14/18 Linfeng_081211_IgG_7.raw High DALNIETAIK IPI:IPI00909509.1 6 1 CID 32.70 3.70 1.00 1 2 544.30316 1087.59905 -0.34 34.10 7514 7514 MS2 14/18 Linfeng_081211_IgG_6.raw High GVDEVTIVNILTNR IPI:IPI00909509.1 4 1 CID 19.92 3.62 1.00 1 2 771.92993 1542.85259 2.54 45.00 11072 11072 MS2 15/26 Linfeng_081211_IgG_7.raw High TPAQYDASELK IPI:IPI00909509.1 5 1 CID 57.46 3.61 1.00 1 2 611.79999 1222.59270 -1.92 24.52 4479 4479 MS2 15/20 Linfeng_081211_IgG_6.raw IPI:IPI00917777.1 937 105.3 5.22 116 kDa U5 small nuclear ribonucleoprotein component isoform b 15.26 15 8 94.76 7.04 6 4 72.07 8.22 5 4 54.29 4.80 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IEHTYTGGVDSDLGEAmSDcDPDGPLmcHTTK IPI:IPI00917777.1 3 1 CID "M17(Oxidation), C20(Carbamidomethyl), M27(Oxidation), C28(Carbamidomethyl)" 74.66 6.03 1.00 1 4 886.11542 3541.43984 -2.87 29.02 2750 2750 MS2 35/186 Linfeng_091611_rIgG_3.raw High GLAEDIENEVVQITWNR 3 0 CID 112.85 5.88 1.00 1 3 662.66931 1985.99338 0.30 52.92 6271 6271 MS2 35/64 Linfeng_091811_SIN3A_2.raw High VPAGNWVLIEGVDQPIVK IPI:IPI00903143.1 3 1 CID 53.68 5.75 1.00 1 2 967.54175 1934.07622 0.80 43.43 11014 11014 MS2 21/34 Linfeng_081211_IgG_3.raw High GLAEDIENEVVQITWNR 3 0 CID 103.58 5.72 1.00 1 3 662.66833 1985.99045 -1.18 52.97 6276 6276 MS2 29/64 Linfeng_091811_SIN3A_3.raw High AFIPAIDSFGFETDLR 2 0 CID 68.69 5.40 1.00 1 3 600.30481 1798.89988 -0.69 47.11 5554 5554 MS2 26/60 Linfeng_091811_SIN3A_2.raw High AFIPAIDSFGFETDLR IPI:IPI00917777.1 2 1 CID 41.28 5.38 1.00 1 3 600.30304 1798.89457 -3.64 46.91 5022 5022 MS2 26/60 Linfeng_091611_rIgG_3.raw High GLAEDIENEVVQITWNR IPI:IPI00917777.1 3 1 CID 55.93 5.01 1.00 1 3 662.66833 1985.99045 -1.18 52.56 5716 5716 MS2 25/64 Linfeng_091611_rIgG_3.raw High AFIPAIDSFGFETDLR IPI:IPI00917777.1 2 1 CID 114.03 4.84 1.00 1 2 899.95142 1798.89556 -3.09 46.86 5016 5016 MS2 19/30 Linfeng_091611_rIgG_3.raw High SFVEFILEPLYK IPI:IPI00917777.1 3 1 CID 61.07 4.76 1.00 1 2 742.90485 1484.80242 -0.80 50.62 5479 5479 MS2 19/22 Linfeng_091611_rIgG_3.raw High VLGENYTLEDEEDSQIcTVGR IPI:IPI00903143.1 3 1 CID C17(Carbamidomethyl) 77.32 4.70 1.00 1 2 1214.05542 2427.10356 2.24 35.31 8256 8256 MS2 20/40 Linfeng_081211_IgG_3.raw High ILAQVVGDVDTSLPR IPI:IPI00903143.1 3 1 CID 80.11 4.69 1.00 1 2 791.94159 1582.87590 -2.58 38.98 9511 9511 MS2 20/28 Linfeng_081211_IgG_3.raw High SFVEFILEPLYK 3 0 CID 53.09 4.19 1.00 1 2 742.90448 1484.80168 -1.29 51.05 6049 6049 MS2 16/22 Linfeng_091811_SIN3A_2.raw High VLGENYTLEDEEDSQIcTVGR IPI:IPI00903143.1 3 1 CID C17(Carbamidomethyl) 52.92 4.17 1.00 1 3 809.70654 2427.10508 2.86 35.30 8253 8253 MS2 21/80 Linfeng_081211_IgG_3.raw High VPAGNWVLIEGVDQPIVK IPI:IPI00903143.1 3 1 CID 61.31 4.14 1.00 1 3 645.36444 1934.07877 2.11 43.36 10992 10992 MS2 23/68 Linfeng_081211_IgG_3.raw High DSIVQGFQWGTR IPI:IPI00903143.1 3 1 CID 61.41 4.13 1.00 1 2 697.34540 1393.68352 -1.75 39.18 9573 9573 MS2 17/22 Linfeng_081211_IgG_3.raw IPI:IPI00942512.1 628 64.4 6.48 "keratin, type II cytoskeletal 3" 7.01 15 4 424.84 5.10 6 3 714.68 3.66 5 2 335.01 1.75 4 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLRDYQELMNVK IPI:IPI00021304.1 5 1 CID 39.78 4.94 1.00 1 3 507.93976 1521.80472 -3.10 33.33 3688 3688 MS2 22/44 Linfeng_091611_rIgG_9.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High AEAEALYQTK IPI:IPI00329306.3;IPI:IPI00477227.3;IPI:IPI00797452.2;IPI:IPI00942512.1 11 4 CID 57.82 3.76 1.00 1 2 562.28387 1123.56047 -2.27 24.63 4520 4520 MS2 15/18 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High TAAENEFVTLK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00942512.1;IPI:IPI00956313.1 9 4 CID 43.81 3.46 1.00 1 2 611.81824 1222.62920 -1.84 30.62 6487 6487 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00013174.2 669 69.4 9.67 Isoform 1 of RNA-binding protein 14 11.81 12 5 96.92 11.81 7 5 68.21 8.22 3 3 53.17 5.83 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IFVGNVSAAcTSQELR 7 0 CID C10(Carbamidomethyl) 94.32 5.92 1.00 1 2 876.43890 1751.87053 -2.31 31.90 3710 3710 MS2 25/30 Linfeng_091611_rIgG_4.raw High TQSSASLAASYAAQQHPQAAASYR 2 0 CID 67.91 5.65 1.00 1 3 822.39569 2465.17252 -3.22 27.39 3105 3105 MS2 26/92 Linfeng_091611_rIgG_4.raw High TQSSASLAASYAAQQHPQAAASYR 2 0 CID 79.85 5.54 1.00 1 3 822.39679 2465.17582 -1.88 27.70 3092 3092 MS2 23/92 Linfeng_091811_SIN3A_4.raw High TQSSASLAASYAAQQHPQAAASYR IPI:IPI00013174.2 2 1 CID 56.71 5.40 1.00 1 3 822.39819 2465.18003 -0.18 27.65 5275 5275 MS2 25/92 Linfeng_081211_IgG_4.raw High IFVGNVSAAcTSQELR IPI:IPI00013174.2;IPI:IPI00719549.2 7 2 CID C10(Carbamidomethyl) 25.15 4.91 1.00 1 3 584.63025 1751.87619 0.92 32.24 6806 6806 MS2 21/60 Linfeng_081211_IgG_4.raw High KGPGLAVQSGDK IPI:IPI00013174.2 2 1 CID 53.81 4.35 1.00 1 3 386.21591 1156.63318 0.91 18.66 2460 2460 MS2 24/44 Linfeng_081211_IgG_4.raw High ASYVAPLTAQPATYR 2 0 CID 79.88 4.25 1.00 1 2 804.92017 1608.83306 -3.12 30.51 3528 3528 MS2 20/28 Linfeng_091611_rIgG_4.raw High ASYVAPLTAQPATYR 2 0 CID 85.32 4.13 1.00 1 2 804.92010 1608.83293 -3.20 30.93 3531 3531 MS2 20/28 Linfeng_091811_SIN3A_4.raw High ASYVAPLTAQPATYR IPI:IPI00013174.2 2 1 CID 15.62 4.12 1.00 1 3 536.95074 1608.83768 -0.25 31.04 6418 6418 MS2 21/56 Linfeng_081211_IgG_4.raw High IFVGNVSAAcTSQELR IPI:IPI00013174.2;IPI:IPI00719549.2 7 2 CID C10(Carbamidomethyl) 65.33 4.12 1.00 1 2 876.44122 1751.87517 0.34 32.21 6795 6795 MS2 18/30 Linfeng_081211_IgG_4.raw High ASYVAPLTAQPATYR IPI:IPI00013174.2 2 1 CID 74.07 3.98 1.00 1 2 804.92242 1608.83757 -0.32 31.04 6417 6417 MS2 20/28 Linfeng_081211_IgG_4.raw High AQPSVSLGAAYR IPI:IPI00013174.2 2 1 CID 57.53 3.71 1.00 1 2 610.32440 1219.64153 -1.22 28.22 5455 5455 MS2 16/22 Linfeng_081211_IgG_4.raw IPI:IPI00216493.1 297 31.5 7.31 Isoform 3 of Heterogeneous nuclear ribonucleoprotein H3 21.55 23 4 72.84 14.48 7 3 64.75 14.48 8 3 58.99 21.55 8 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ATENDIANFFSPLNPIR 7 0 CID 81.35 5.90 1.00 1 2 959.98560 1918.96391 -1.00 46.81 5572 5572 MS2 21/32 Linfeng_091611_rIgG_6.raw High ATENDIANFFSPLNPIR IPI:IPI00216493.1 7 1 CID 27.13 5.85 1.00 1 3 640.32556 1918.96213 -1.93 47.01 5570 5570 MS2 27/64 Linfeng_091811_SIN3A_6.raw High ATENDIANFFSPLNPIR IPI:IPI00216493.1 7 1 CID 67.75 5.82 1.00 1 2 959.98389 1918.96050 -2.79 47.12 5584 5584 MS2 19/32 Linfeng_091811_SIN3A_6.raw High ATENDIANFFSPLNPIR 7 0 CID 23.45 5.79 1.00 1 3 640.32715 1918.96689 0.55 46.76 5487 5487 MS2 29/64 Linfeng_091611_rIgG_7.raw High ATENDIANFFSPLNPIR 7 0 CID 40.04 5.60 1.00 1 3 640.32593 1918.96323 -1.36 46.73 5562 5562 MS2 24/64 Linfeng_091611_rIgG_6.raw High ATENDIANFFSPLNPIR IPI:IPI00216493.1 7 1 CID 29.66 5.43 1.00 1 3 640.32520 1918.96103 -2.51 47.18 5374 5374 MS2 27/64 Linfeng_091811_SIN3A_7.raw High ATENDIANFFSPLNPIR IPI:IPI00216493.1 7 1 CID 24.16 5.18 1.00 1 3 640.32532 1918.96140 -2.32 47.33 5454 5454 MS2 23/64 Linfeng_091811_SIN3A_8.raw High ATGEADVEFVTHEDAVAAmSK IPI:IPI00216493.1 7 1 CID M19(Oxidation) 40.03 5.12 1.00 1 3 732.00146 2193.98984 -3.25 31.16 3449 3449 MS2 26/80 Linfeng_091811_SIN3A_9.raw High ATENDIANFFSPLNPIR 7 0 CID 45.15 4.85 1.00 1 2 959.98480 1918.96233 -1.83 46.83 5495 5495 MS2 17/32 Linfeng_091611_rIgG_7.raw High ATENDIANFFSPLNPIR 7 0 CID 61.79 4.85 1.00 1 2 959.98688 1918.96648 0.33 47.47 11614 11614 MS2 17/32 Linfeng_081211_IgG_6.raw High DGmDNQGGYGSVGR IPI:IPI00216493.1 5 1 CID M3(Oxidation) 69.45 4.52 1.00 1 2 714.79333 1428.57939 -1.06 20.34 2058 2058 MS2 19/26 Linfeng_091811_SIN3A_6.raw High DGmDNQGGYGSVGR 5 0 CID M3(Oxidation) 69.40 4.44 1.00 1 2 714.79315 1428.57903 -1.32 20.18 1996 1996 MS2 20/26 Linfeng_091611_rIgG_7.raw High DGmDNQGGYGSVGR 5 0 CID M3(Oxidation) 79.91 4.42 1.00 1 2 714.79327 1428.57927 -1.14 20.32 2075 2075 MS2 21/26 Linfeng_091611_rIgG_6.raw High DGMDNQGGYGSVGR IPI:IPI00216493.1 5 1 CID 53.35 4.42 1.00 1 2 706.79443 1412.58159 -3.12 23.62 2517 2517 MS2 20/26 Linfeng_091811_SIN3A_6.raw High STGEAFVQFASK 3 0 CID 72.25 4.30 1.00 1 2 636.31476 1271.62224 -3.51 32.29 3704 3704 MS2 18/22 Linfeng_091611_rIgG_6.raw High DGmDNQGGYGSVGR 5 0 CID M3(Oxidation) 53.56 4.28 1.00 1 2 714.79358 1428.57988 -0.72 20.64 3307 3307 MS2 17/26 Linfeng_081211_IgG_6.raw High STGEAFVQFASK 3 0 CID 57.31 4.24 1.00 1 2 636.31689 1271.62651 -0.15 32.86 7064 7064 MS2 18/22 Linfeng_081211_IgG_7.raw High ATENDIANFFSPLNPIR 7 0 CID 41.36 4.24 1.00 1 2 959.98608 1918.96489 -0.50 47.63 11505 11505 MS2 14/32 Linfeng_081211_IgG_8.raw High STGEAFVQFASK IPI:IPI00216493.1 3 1 CID 77.23 4.20 1.00 1 2 636.31519 1271.62309 -2.84 32.49 3720 3720 MS2 18/22 Linfeng_091811_SIN3A_6.raw High STGEAFVQFASK 3 0 CID 51.03 4.16 1.00 1 2 636.31567 1271.62407 -2.07 32.20 3628 3628 MS2 18/22 Linfeng_091611_rIgG_7.raw High STGEAFVQFASK 3 0 CID 63.47 3.97 1.00 1 2 636.31445 1271.62163 -3.99 32.53 6896 6896 MS2 17/22 Linfeng_081211_IgG_10.raw High STGEAFVQFASK 3 0 CID 81.04 3.95 1.00 1 2 636.31586 1271.62444 -1.78 32.80 7066 7066 MS2 17/22 Linfeng_081211_IgG_6.raw High DGmDNQGGYGSVGR 5 0 CID M3(Oxidation) 61.35 3.85 1.00 1 2 714.79370 1428.58013 -0.55 21.23 3290 3290 MS2 17/26 Linfeng_081211_IgG_7.raw IPI:IPI00216587.9 208 24.2 10.32 40S ribosomal protein S8 26.44 7 4 45.17 26.44 7 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIDVVYNASNNELVR IPI:IPI00216587.9 2 1 CID 79.15 6.74 1.00 1 3 573.63989 1718.90512 -1.23 35.36 8153 8153 MS2 30/56 Linfeng_081211_IgG_8.raw High IIDVVYNASNNELVR IPI:IPI00216587.9 2 1 CID 78.32 5.74 1.00 1 2 859.95636 1718.90544 -1.05 35.29 8128 8128 MS2 22/28 Linfeng_081211_IgG_8.raw High ISSLLEEQFQQGK IPI:IPI00216587.9 2 1 CID 71.90 5.00 1.00 1 2 753.89191 1506.77654 -2.24 33.77 7599 7599 MS2 18/24 Linfeng_081211_IgG_8.raw High IIDVVYNASNNELVR IPI:IPI00216587.9 2 1 CID 79.66 4.70 1.00 1 2 859.95538 1718.90349 -2.18 35.31 7881 7881 MS2 16/28 Linfeng_081211_IgG_10.raw High NcIVLIDSTPYR IPI:IPI00216587.9 2 1 CID C2(Carbamidomethyl) 48.65 4.26 1.00 1 2 725.87079 1450.73430 -1.12 34.79 7967 7967 MS2 17/22 Linfeng_081211_IgG_8.raw High ISSLLEEQFQQGK IPI:IPI00216587.9 2 1 CID 50.63 4.25 1.00 1 2 753.89264 1506.77800 -1.27 33.87 7382 7382 MS2 14/24 Linfeng_081211_IgG_10.raw High LDVGNFSWGSEccTR IPI:IPI00216587.9 1 1 CID "C12(Carbamidomethyl), C13(Carbamidomethyl)" 60.58 3.68 1.00 1 2 894.37506 1787.74285 -2.69 37.38 8753 8753 MS2 12/28 Linfeng_081211_IgG_8.raw IPI:IPI00216695.1 1479 170.3 8.48 Isoform 2 of Tyrosine-protein kinase BAZ1B 5.95 10 6 167.40 4.94 7 5 128.29 2.16 2 2 71.18 1.01 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YWLFSDEVPGLFIEK 2 0 CID 86.11 5.61 1.00 1 2 921.96899 1842.93071 -0.34 51.04 6048 6048 MS2 24/28 Linfeng_091811_SIN3A_2.raw High YWLFSDEVPGLFIEK IPI:IPI00216695.1 2 1 CID 94.99 5.45 1.00 1 2 921.96893 1842.93059 -0.41 50.77 5906 5906 MS2 23/28 Linfeng_091611_rIgG_2.raw High LAEDEGDSEPEAVGQSR IPI:IPI00216695.1 2 1 CID 59.05 5.01 1.00 1 2 894.89746 1788.78765 -0.39 24.18 4059 4059 MS2 20/32 Linfeng_081211_IgG_2.raw High APPVDDAEVDELVLQTK IPI:IPI00216695.1 2 1 CID 32.66 4.84 1.00 1 3 613.65033 1838.93644 -1.01 43.67 7260 7260 MS2 20/64 Linfeng_081211_IgG_1.raw High APPVDDAEVDELVLQTK IPI:IPI00216695.1 2 1 CID 44.29 4.83 1.00 1 3 613.65015 1838.93589 -1.31 37.97 4292 4292 MS2 28/64 Linfeng_091611_rIgG_2.raw High APPVDDAEVDELVLQTK IPI:IPI00216695.1 2 1 CID 64.52 4.69 1.00 1 2 919.97302 1838.93877 0.25 43.76 7288 7288 MS2 14/32 Linfeng_081211_IgG_1.raw High GGLGYVEETSEFEAR IPI:IPI00216695.1 2 1 CID 52.12 3.85 1.00 1 2 822.38251 1643.75774 1.77 35.56 7336 7336 MS2 17/28 Linfeng_081211_IgG_2.raw High LETSEFFELTSEEK IPI:IPI00216695.1 2 1 CID 74.15 3.75 1.00 1 2 844.89954 1688.79180 0.94 46.65 8172 8172 MS2 14/26 Linfeng_081211_IgG_1.raw High APPVDDAEVDELVLQTK IPI:IPI00216695.1 2 1 CID 52.12 3.53 1.00 1 2 919.97375 1838.94023 1.05 38.82 8284 8284 MS2 16/32 Linfeng_081211_IgG_2.raw High FSDFLLDPYK IPI:IPI00216695.1 2 1 CID 54.24 3.49 1.00 1 2 622.81342 1244.61955 -0.21 49.47 8901 8901 MS2 15/18 Linfeng_081211_IgG_1.raw IPI:IPI00304925.5 641 70.0 5.66 Heat shock 70 kDa protein 1A/1B 26.52 18 10 106.65 10.61 7 5 85.49 12.64 5 4 170.55 16.54 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SINPDEAVAYGAAVQAAILmGDK IPI:IPI00304925.5 12 1 CID M20(Oxidation) 300.00 7.94 1.00 1 3 774.05328 2320.14530 -1.62 47.01 5656 5656 MS2 39/88 Linfeng_091611_rIgG_4.raw High SINPDEAVAYGAAVQAAILmGDK IPI:IPI00304925.5;IPI:IPI00893099.1 12 2 CID M20(Oxidation) 114.78 7.80 1.00 1 3 774.05377 2320.14676 -0.99 47.24 5629 5629 MS2 39/88 Linfeng_091811_SIN3A_4.raw High QTQIFTTYSDNQPGVLIQVYEGER IPI:IPI00304925.5;IPI:IPI00893099.1 12 2 CID 115.31 7.51 1.00 1 3 929.45679 2786.35581 -2.67 42.44 5017 5017 MS2 31/92 Linfeng_091811_SIN3A_4.raw High NQVALNPQNTVFDAK IPI:IPI00304925.5 4 1 CID 91.13 6.04 1.00 1 2 829.92639 1658.84551 -2.55 32.30 3711 3711 MS2 23/28 Linfeng_091811_SIN3A_4.raw High NQVALNPQNTVFDAK IPI:IPI00304925.5 4 1 CID 97.22 5.94 1.00 1 2 829.92633 1658.84538 -2.62 32.05 3730 3730 MS2 22/28 Linfeng_091611_rIgG_4.raw High SINPDEAVAYGAAVQAAILMGDK IPI:IPI00304925.5 12 1 CID 73.69 5.67 1.00 1 3 768.72064 2304.14737 -2.94 49.41 5955 5955 MS2 29/88 Linfeng_091611_rIgG_4.raw High HWPFQVINDGDKPK IPI:IPI00304925.5 2 1 CID 55.36 5.59 1.00 1 3 560.95215 1680.84189 -4.43 31.87 3655 3655 MS2 27/52 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDR IPI:IPI00304925.5 6 1 CID 84.74 5.52 1.00 1 3 563.30377 1687.89676 -2.77 38.41 4497 4497 MS2 31/60 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDR IPI:IPI00304925.5 6 1 CID 61.98 5.37 1.00 1 3 563.30322 1687.89511 -3.75 38.07 4514 4514 MS2 31/60 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDR IPI:IPI00911039.1 6 1 CID 113.24 5.16 1.00 1 2 844.45435 1687.90141 -0.02 38.11 8666 8666 MS2 21/30 Linfeng_081211_IgG_4.raw High EIAEAYLGYPVTNAVITVPAYFNDSQR IPI:IPI00304925.5 2 1 CID 67.06 4.66 1.00 1 3 1001.16882 3001.49192 -0.79 47.13 5670 5670 MS2 26/104 Linfeng_091611_rIgG_4.raw High AFYPEEISSmVLTK IPI:IPI00304925.5;IPI:IPI00893099.1 5 2 CID M10(Oxidation) 56.46 4.54 1.00 1 3 544.27100 1630.79844 -3.02 38.12 4460 4460 MS2 28/52 Linfeng_091811_SIN3A_4.raw High NQVALNPQNTVFDAK IPI:IPI00911039.1 4 1 CID 36.04 4.49 1.00 1 2 829.92932 1658.85137 0.99 32.41 6864 6864 MS2 22/28 Linfeng_081211_IgG_4.raw High IINEPTAAAIAYGLDR IPI:IPI00911039.1 6 1 CID 42.77 4.39 1.00 1 3 563.30530 1687.90134 -0.06 38.10 8665 8665 MS2 24/60 Linfeng_081211_IgG_4.raw High DAGVIAGLNVLR IPI:IPI00911039.1;IPI:IPI00942823.1 9 2 CID 61.32 4.27 1.00 1 2 599.35144 1197.69560 0.44 39.68 9163 9163 MS2 19/22 Linfeng_081211_IgG_4.raw High AQIHDLVLVGGSTR IPI:IPI00911039.1 3 1 CID 61.88 4.11 1.00 1 2 733.40936 1465.81145 -0.53 31.08 6434 6434 MS2 16/26 Linfeng_081211_IgG_4.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 41.21 3.57 1.00 2 2 614.81689 1228.62651 -1.29 24.79 4573 4573 MS2 15/20 Linfeng_081211_IgG_3.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 15.51 3.47 1.00 2 2 614.81671 1228.62615 -1.59 24.22 4232 4232 MS2 13/20 Linfeng_081211_IgG_7.raw IPI:IPI00552768.1 85 9.4 6.04 "Thioredoxin, isoform CRA_b" 15.29 7 1 55.06 15.29 7 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 68.25 4.52 1.00 1 2 668.82190 1336.63652 -1.11 33.45 7232 7232 MS2 19/24 Linfeng_081211_IgG_10.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 82.52 4.07 1.00 1 2 668.82245 1336.63762 -0.29 34.56 7975 7975 MS2 19/24 Linfeng_081211_IgG_3.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 64.06 3.97 1.00 1 2 668.82288 1336.63848 0.35 33.85 7425 7425 MS2 18/24 Linfeng_081211_IgG_6.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 71.47 3.90 1.00 1 2 668.82288 1336.63848 0.35 33.88 7424 7424 MS2 17/24 Linfeng_081211_IgG_7.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 59.08 3.86 1.00 1 2 668.82153 1336.63579 -1.66 42.00 6796 6796 MS2 15/24 Linfeng_081211_IgG_1.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 56.51 3.55 1.00 1 2 668.82141 1336.63555 -1.84 33.71 7289 7289 MS2 17/24 Linfeng_081211_IgG_4.raw High TAFQEALDAAGDK IPI:IPI00552768.1 2 1 CID 50.50 3.49 1.00 1 2 668.82275 1336.63823 0.16 35.30 7262 7262 MS2 14/24 Linfeng_081211_IgG_2.raw IPI:IPI00642046.1 489 54.8 10.13 RSL1D1 protein 11.66 8 4 137.52 7.77 7 3 30.91 3.89 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EINDcIGGTVLNISK IPI:IPI00642046.1 2 1 CID C5(Carbamidomethyl) 66.95 4.98 1.00 1 2 816.91614 1632.82500 -0.75 36.44 8640 8640 MS2 15/28 Linfeng_081211_IgG_3.raw High SAALPIFSSFVSNWDEATK IPI:IPI00642046.1 2 1 CID 53.38 4.74 1.00 1 3 690.67627 2070.01426 -1.78 51.34 6196 6196 MS2 27/72 Linfeng_091611_rIgG_4.raw High EINDcIGGTVLNISK IPI:IPI00642046.1 2 1 CID C5(Carbamidomethyl) 74.63 4.67 1.00 1 2 816.91608 1632.82488 -0.83 35.67 7899 7899 MS2 19/28 Linfeng_081211_IgG_4.raw High EINDcIGGTVLNISK IPI:IPI00642046.1 2 1 CID C5(Carbamidomethyl) 26.32 4.25 1.00 1 2 816.91754 1632.82781 0.97 36.92 7723 7723 MS2 17/28 Linfeng_081211_IgG_2.raw High TVSQIISLQTLK IPI:IPI00642046.1 2 1 CID 62.19 4.07 1.00 1 2 665.90143 1330.79558 1.12 37.05 8312 8312 MS2 18/22 Linfeng_081211_IgG_4.raw High TVSQIISLQTLK IPI:IPI00642046.1 2 1 CID 65.79 3.91 1.00 1 2 665.89978 1330.79228 -1.36 36.75 8217 8217 MS2 17/22 Linfeng_081211_IgG_5.raw High SDSEDIcLFTK IPI:IPI00642046.1 2 1 CID C7(Carbamidomethyl) 58.28 3.68 1.00 1 2 657.79785 1314.58843 0.12 34.15 7533 7533 MS2 14/20 Linfeng_081211_IgG_6.raw High SDSEDIcLFTK IPI:IPI00642046.1 2 1 CID C7(Carbamidomethyl) 48.15 3.62 1.00 1 2 657.79694 1314.58660 -1.27 34.74 8045 8045 MS2 15/20 Linfeng_081211_IgG_3.raw IPI:IPI00658000.3 579 63.7 8.87 Isoform 1 of Insulin-like growth factor 2 mRNA-binding protein 3 12.78 7 5 80.49 12.78 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVNELQNLSSAEVVVPR IPI:IPI00658000.3 3 1 CID 40.42 5.04 1.00 1 2 927.99927 1854.99126 -0.43 36.74 8203 8203 MS2 17/32 Linfeng_081211_IgG_4.raw High TVNELQNLSSAEVVVPR IPI:IPI00658000.3 3 1 CID 36.58 4.08 1.00 1 3 619.00165 1854.99039 -0.90 36.69 8190 8190 MS2 27/64 Linfeng_081211_IgG_4.raw High TGYAFVDcPDESWALK IPI:IPI00658000.3 2 1 CID C8(Carbamidomethyl) 51.92 3.92 1.00 1 2 929.91931 1858.83135 -0.19 39.31 9047 9047 MS2 18/30 Linfeng_081211_IgG_4.raw High mVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID M1(Oxidation) 60.54 3.91 1.00 1 2 723.88593 1446.76457 -1.12 32.75 6988 6988 MS2 17/24 Linfeng_081211_IgG_4.raw High MVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID 13.15 3.83 1.00 1 2 715.88947 1430.77165 0.26 35.75 7918 7918 MS2 15/24 Linfeng_081211_IgG_4.raw High SITILSTPEGTSAAcK IPI:IPI00658000.3 2 1 CID C15(Carbamidomethyl) 22.01 3.65 1.00 1 2 818.41589 1635.82451 -0.84 31.56 6591 6591 MS2 17/30 Linfeng_081211_IgG_4.raw High LNGFQLENFTLK IPI:IPI00658000.3 2 1 CID 24.70 3.48 1.00 1 2 712.38361 1423.75994 1.32 41.08 9586 9586 MS2 11/22 Linfeng_081211_IgG_4.raw IPI:IPI00909093.1 775 89.2 8.54 "cDNA FLJ51295, highly similar to Cell division cycle 5-like protein" 12.13 9 6 90.54 12.13 7 6 7.09 2.32 1 1 38.57 2.32 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EIDDTYIEDAADVDAR IPI:IPI00909093.1 2 1 CID 74.46 5.64 1.00 1 3 604.27051 1810.79697 -0.48 35.99 8501 8501 MS2 33/60 Linfeng_081211_IgG_3.raw High LVLPAPQISDAELQEVVK 2 0 CID 89.21 5.51 1.00 1 3 650.36877 1949.09177 -1.90 42.09 4952 4952 MS2 37/68 Linfeng_091811_SIN3A_3.raw High LVLPAPQISDAELQEVVK 2 0 CID 91.17 5.23 1.00 1 3 650.36725 1949.08719 -4.25 41.91 4389 4389 MS2 33/68 Linfeng_091611_rIgG_3.raw High LVLPAPQISDAELQEVVK IPI:IPI00909093.1 2 1 CID 76.20 4.80 1.00 1 3 650.37073 1949.09763 1.11 42.81 10806 10806 MS2 33/68 Linfeng_081211_IgG_3.raw High EIDDTYIEDAADVDAR IPI:IPI00909093.1 2 1 CID 83.43 4.76 1.00 1 2 905.90283 1810.79839 0.31 36.01 8509 8509 MS2 21/30 Linfeng_081211_IgG_3.raw High ESDLPSAILQTSGVSEFTK IPI:IPI00909093.1 2 1 CID 42.56 4.46 1.00 1 3 670.34155 2009.01010 1.33 42.59 10740 10740 MS2 23/72 Linfeng_081211_IgG_3.raw High AQDVLVQEmEVVK IPI:IPI00909093.1 2 1 CID M9(Oxidation) 40.85 4.45 1.00 1 2 752.38824 1503.76921 -2.12 31.11 6673 6673 MS2 17/24 Linfeng_081211_IgG_3.raw High NDFEIVLPENAEK IPI:IPI00909093.1 2 1 CID 44.91 4.03 1.00 1 2 759.37769 1517.74809 -0.13 37.68 9079 9079 MS2 14/24 Linfeng_081211_IgG_3.raw High QVVQTPNTVLSTPFR IPI:IPI00909093.1 2 1 CID 29.87 3.80 1.00 1 2 843.96179 1686.91631 -0.65 36.65 8714 8714 MS2 13/28 Linfeng_081211_IgG_3.raw IPI:IPI00909372.2 618 69.9 8.54 RNA-binding protein 28 isoform 2 16.83 12 8 89.99 11.49 7 6 20.07 5.34 2 2 57.45 7.93 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NLSFDSEEEELGELLQQFGELK IPI:IPI00909372.2 3 1 CID 144.11 7.69 1.00 1 3 852.07880 2554.22184 0.86 54.77 5965 5965 MS2 37/84 Linfeng_091611_rIgG_3.raw High NLSFDSEEEELGELLQQFGELK IPI:IPI00946105.3 3 1 CID 109.31 7.60 1.00 1 3 852.07886 2554.22202 0.93 54.80 6450 6450 MS2 36/84 Linfeng_091811_SIN3A_3.raw High RPIVEFSLEDR IPI:IPI00909372.2 2 1 CID 38.52 5.20 1.00 1 3 454.24399 1360.71741 -3.38 32.60 3207 3207 MS2 24/40 Linfeng_091611_rIgG_3.raw High SEQLEELFSQVGPVK IPI:IPI00909372.2 4 1 CID 47.82 4.70 1.00 1 2 845.43884 1689.87041 0.55 42.84 10815 10815 MS2 19/28 Linfeng_081211_IgG_3.raw High SEQLEELFSQVGPVK IPI:IPI00909372.2 4 1 CID 51.06 4.66 1.00 1 3 563.96136 1689.86954 0.04 42.79 10798 10798 MS2 24/56 Linfeng_081211_IgG_3.raw High cLLAASPENEAGGLK IPI:IPI00909372.2 3 1 CID C1(Carbamidomethyl) 67.74 4.33 1.00 1 2 765.38495 1529.76262 -0.19 31.67 6883 6883 MS2 21/28 Linfeng_081211_IgG_3.raw High cLLAASPENEAGGLK IPI:IPI00946105.3 3 1 CID C1(Carbamidomethyl) 34.63 4.32 1.00 1 2 765.38300 1529.75871 -2.74 30.32 3421 3421 MS2 17/28 Linfeng_091811_SIN3A_3.raw High DTQSVSAIGEEK IPI:IPI00946105.3 4 1 CID 77.46 4.30 1.00 1 2 632.30304 1263.59880 -5.98 22.67 2361 2361 MS2 18/22 Linfeng_091811_SIN3A_3.raw High DTQSVSAIGEEK IPI:IPI00909372.2 4 1 CID 93.94 4.12 1.00 1 2 632.30524 1263.60320 -2.50 24.07 4347 4347 MS2 18/22 Linfeng_081211_IgG_3.raw High DQNIFVSR IPI:IPI00909372.2 2 1 CID 22.75 3.61 1.00 1 2 489.75195 978.49663 -3.81 29.89 6231 6231 MS2 11/14 Linfeng_081211_IgG_3.raw High AAEGVSAADmAK IPI:IPI00909372.2 2 1 CID M10(Oxidation) 81.10 3.57 1.00 1 2 568.76575 1136.52422 -0.95 18.43 2410 2410 MS2 18/22 Linfeng_081211_IgG_3.raw High FNQLVEQYK IPI:IPI00909372.2 2 1 CID 37.89 3.52 1.00 1 2 584.80322 1168.59917 -0.48 29.49 6078 6078 MS2 14/16 Linfeng_081211_IgG_3.raw IPI:IPI00921516.1 953 107.2 7.02 N-acetyltransferase 10 isoform b 18.68 16 11 138.44 7.87 7 5 81.64 10.81 6 6 78.75 3.78 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IVSGcPLPEAcELYYVNR IPI:IPI00921516.1 2 1 CID "C5(Carbamidomethyl), C11(Carbamidomethyl)" 48.94 6.33 1.00 1 3 714.01215 2140.02188 0.76 38.45 9340 9340 MS2 23/68 Linfeng_081211_IgG_3.raw High LGQAELVVIDEAAAIPLPLVK IPI:IPI00921516.1 2 1 CID 111.29 5.71 1.00 1 3 720.42657 2159.26517 -1.64 50.74 5494 5494 MS2 34/80 Linfeng_091611_rIgG_3.raw High ESLQDTQPVGVLVDccK IPI:IPI00921516.1 2 1 CID "C15(Carbamidomethyl), C16(Carbamidomethyl)" 44.95 5.46 1.00 1 3 649.97668 1947.91550 0.19 34.84 8085 8085 MS2 27/64 Linfeng_081211_IgG_3.raw High GFDALQYQEHLDYEIIQSLNPEFNK IPI:IPI00921516.1 2 1 CID 44.57 5.17 1.00 1 4 753.61505 3011.43838 -1.28 50.39 5451 5451 MS2 35/144 Linfeng_091611_rIgG_3.raw High LGQAELVVIDEAAAIPLPLVK 2 0 CID 118.27 5.15 1.00 1 3 720.42706 2159.26664 -0.96 50.96 6038 6038 MS2 32/80 Linfeng_091811_SIN3A_2.raw High ESLQDTQPVGVLVDccK IPI:IPI00921516.1 2 1 CID "C15(Carbamidomethyl), C16(Carbamidomethyl)" 102.96 5.14 1.00 1 2 974.46112 1947.91496 -0.08 34.81 8073 8073 MS2 18/32 Linfeng_081211_IgG_3.raw High WLNDLLcLDcLNITR IPI:IPI00921516.1 2 1 CID "C7(Carbamidomethyl), C10(Carbamidomethyl)" 53.92 5.11 1.00 1 3 640.32147 1918.94986 -0.83 49.28 5311 5311 MS2 25/56 Linfeng_091611_rIgG_3.raw High IAVHPDYQGmGYGSR IPI:IPI00921516.1 2 1 CID M10(Oxidation) 82.39 4.91 1.00 1 3 556.25879 1666.76181 -1.48 23.49 2018 2018 MS2 23/56 Linfeng_091611_rIgG_3.raw High QDDPFELFIAATNIR IPI:IPI00921516.1 2 1 CID 49.02 4.78 1.00 1 3 583.96454 1749.87906 -0.94 52.15 5668 5668 MS2 25/56 Linfeng_091611_rIgG_3.raw High LGQAELVVIDEAAAIPLPLVK 2 0 CID 90.58 4.73 1.00 1 3 720.42773 2159.26865 -0.03 51.02 6067 6067 MS2 24/80 Linfeng_091811_SIN3A_3.raw High TLHEVSLQESIR IPI:IPI00921516.1 2 1 CID 28.87 4.67 1.00 1 3 471.25427 1411.74826 -4.08 27.15 2508 2508 MS2 23/44 Linfeng_091611_rIgG_3.raw High IVSGcPLPEAcELYYVNR IPI:IPI00921516.1 2 1 CID "C5(Carbamidomethyl), C11(Carbamidomethyl)" 87.20 4.60 1.00 1 2 1070.51367 2140.02007 -0.09 38.46 9344 9344 MS2 19/34 Linfeng_081211_IgG_3.raw High QDDPFELFIAATNIR 2 0 CID 46.79 4.56 1.00 1 3 583.96472 1749.87961 -0.63 52.51 6228 6228 MS2 26/56 Linfeng_091811_SIN3A_2.raw High LDYLGVSYGLTPR IPI:IPI00921516.1 2 1 CID 83.34 4.48 1.00 1 2 727.38770 1453.76811 -0.34 39.86 9796 9796 MS2 19/24 Linfeng_081211_IgG_3.raw High GDDEEWNEVLNK IPI:IPI00921516.1 2 1 CID 75.39 4.39 1.00 1 2 724.32135 1447.63542 1.22 34.47 7944 7944 MS2 16/22 Linfeng_081211_IgG_3.raw High QQSAQSQVSTTAENK IPI:IPI00921516.1 2 1 CID 67.15 3.50 1.00 1 2 803.88495 1606.76262 -2.58 18.75 2496 2496 MS2 13/28 Linfeng_081211_IgG_3.raw IPI:IPI00940851.1 326 36.1 9.17 ELAV-like protein 1 25.77 13 6 65.37 16.26 7 4 45.83 12.58 3 3 38.15 12.88 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VAGHSLGYGFVNYVTAK IPI:IPI00940851.1 2 1 CID 36.39 4.79 1.00 1 3 594.97534 1782.91147 -3.33 34.63 4010 4010 MS2 27/64 Linfeng_091611_rIgG_6.raw High VAGHSLGYGFVNYVTAK IPI:IPI00940851.1 2 1 CID 61.37 4.72 1.00 1 3 594.97479 1782.90982 -4.25 34.78 4015 4015 MS2 29/64 Linfeng_091811_SIN3A_6.raw High NVALLSQLYHSPAR IPI:IPI00940851.1 2 1 CID 72.90 4.59 1.00 1 2 784.92682 1568.84636 -5.12 34.96 4037 4037 MS2 18/26 Linfeng_091811_SIN3A_6.raw High SLFSSIGEVESAK IPI:IPI00940851.1 2 1 CID 68.24 4.58 1.00 1 2 677.34662 1353.68596 -2.76 37.22 4346 4346 MS2 20/24 Linfeng_091611_rIgG_6.raw High DANLYISGLPR IPI:IPI00940851.1 2 1 CID 66.31 4.15 1.00 1 2 609.82281 1218.63835 -7.72 35.65 4139 4139 MS2 18/20 Linfeng_091611_rIgG_6.raw High TNLIVNYLPQNmTQDELR IPI:IPI00940851.1 2 1 CID M12(Oxidation) 49.19 4.13 1.00 1 3 726.69940 2178.08365 -1.09 38.69 9011 9011 MS2 19/68 Linfeng_081211_IgG_6.raw High VLVDQTTGLSR IPI:IPI00940851.1 2 1 CID 70.72 4.11 1.00 1 2 594.83148 1188.65569 -2.22 26.82 5094 5094 MS2 19/20 Linfeng_081211_IgG_6.raw High VLVDQTTGLSR IPI:IPI00940851.1 2 1 CID 54.69 4.08 1.00 1 2 594.82916 1188.65105 -6.13 26.36 2893 2893 MS2 19/20 Linfeng_091811_SIN3A_6.raw High SLFSSIGEVESAK IPI:IPI00940851.1 2 1 CID 35.19 4.01 1.00 1 2 677.34839 1353.68950 -0.15 37.87 8766 8766 MS2 19/24 Linfeng_081211_IgG_6.raw High VLVDQTTGLSR IPI:IPI00940851.1 2 1 CID 66.67 3.97 1.00 1 2 594.83185 1188.65642 -1.61 27.20 5129 5129 MS2 18/20 Linfeng_081211_IgG_7.raw High DANLYISGLPR IPI:IPI00940851.1 2 1 CID 40.38 3.78 1.00 1 2 609.82745 1218.64763 -0.11 35.87 8115 8115 MS2 15/20 Linfeng_081211_IgG_6.raw High VLVDQTTGLSR IPI:IPI00940851.1 2 1 CID 40.64 3.75 1.00 1 2 594.83167 1188.65605 -1.92 26.77 5213 5213 MS2 15/20 Linfeng_081211_IgG_8.raw High SLFSSIGEVESAK IPI:IPI00940851.1 2 1 CID 31.76 3.75 1.00 1 2 677.34857 1353.68987 0.12 37.71 8706 8706 MS2 17/24 Linfeng_081211_IgG_7.raw IPI:IPI00941783.1 247 26.7 5.55 27 kDa protein 20.24 8 2 79.52 20.24 7 2 33.03 8.10 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGEHNIEVLEGNEQFINAAK 8 0 CID 46.58 6.10 1.00 1 3 742.37500 2225.11045 -4.20 35.30 3935 3935 MS2 25/76 Linfeng_091611_rIgG_9.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 117.42 6.00 1.00 1 3 1062.13245 3184.38279 -1.71 44.31 7467 7467 MS2 26/116 Linfeng_081211_IgG_1.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 127.76 5.57 1.00 1 3 1062.13464 3184.38938 0.36 41.10 9738 9738 MS2 34/116 Linfeng_081211_IgG_6.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 82.17 5.16 1.00 1 3 1062.13562 3184.39231 1.28 41.49 10356 10356 MS2 29/116 Linfeng_081211_IgG_3.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 63.20 4.51 1.00 1 2 1592.69531 3184.38335 -1.53 40.95 9849 9849 MS2 18/58 Linfeng_081211_IgG_8.raw High LGEHNIEVLEGNEQFINAAK IPI:IPI00941783.1 8 1 CID 1.00 4.48 1.00 1 3 742.37720 2225.11704 -1.24 41.23 9922 9922 MS2 14/76 Linfeng_081211_IgG_8.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 91.77 4.26 1.00 1 3 1062.13257 3184.38315 -1.60 40.85 9817 9817 MS2 23/116 Linfeng_081211_IgG_8.raw High DScQGDSGGPVVcNGQLQGIVSWGYGcAQK IPI:IPI00941783.1 3 1 CID "C3(Carbamidomethyl), C13(Carbamidomethyl), C27(Carbamidomethyl)" 73.68 4.22 1.00 1 3 1062.13525 3184.39121 0.93 41.00 9826 9826 MS2 27/116 Linfeng_081211_IgG_7.raw IPI:IPI00942674.1 387 43.3 9.63 43 kDa protein 28.68 10 7 58.37 23.51 7 6 18.15 8.79 2 2 17.71 3.62 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IcQADIVEAVDIASAAK IPI:IPI00641552.2 7 1 CID C2(Carbamidomethyl) 91.97 5.44 1.00 1 2 887.45770 1773.90813 1.64 40.83 9511 9511 MS2 21/32 Linfeng_081211_IgG_4.raw High SRLEVAEAEEEETSIK IPI:IPI00641552.2 7 1 CID 42.85 5.21 1.00 1 3 607.30096 1819.88834 -2.05 28.21 5453 5453 MS2 23/60 Linfeng_081211_IgG_4.raw High FLHSEALLAVAQNR IPI:IPI00942674.1 7 1 CID 33.07 4.85 1.00 1 3 523.62097 1568.84836 -3.86 33.71 3946 3946 MS2 25/52 Linfeng_091611_rIgG_4.raw High RYWEEETVPTTAGASPGPPR IPI:IPI00942674.1 4 1 CID 30.91 4.80 1.00 1 3 734.35712 2201.05680 -2.49 28.69 3282 3282 MS2 21/76 Linfeng_091611_rIgG_4.raw High LEVAEAEEEETSIK IPI:IPI00641552.2 7 1 CID 72.63 4.74 1.00 1 2 788.88196 1576.75664 -1.45 29.53 5905 5905 MS2 22/26 Linfeng_081211_IgG_4.raw High FLHSEALLAVAQNR IPI:IPI00641552.2 7 1 CID 26.84 4.53 1.00 1 3 523.62299 1568.85440 -0.01 34.60 7569 7569 MS2 24/52 Linfeng_081211_IgG_4.raw High FLHSEALLAVAQNR 7 0 CID 30.36 4.35 1.00 1 3 523.62079 1568.84781 -4.21 34.10 3940 3940 MS2 28/52 Linfeng_091811_SIN3A_4.raw High SELLLAEEPGFLEGEDGEDTAK IPI:IPI00641552.2 7 1 CID 70.89 4.34 1.00 1 2 1175.05420 2349.10112 1.27 41.54 9706 9706 MS2 20/42 Linfeng_081211_IgG_4.raw High FLHSEALLAVAQNR IPI:IPI00641552.2 7 1 CID 89.48 4.18 1.00 1 2 784.93158 1568.85588 0.93 34.64 7583 7583 MS2 20/26 Linfeng_081211_IgG_4.raw High GLSGAQDPFPGPAPVPVEVVQK IPI:IPI00641552.2 5 1 CID 61.83 3.77 1.00 1 2 1095.08569 2189.16411 1.78 37.95 8616 8616 MS2 16/42 Linfeng_081211_IgG_4.raw IPI:IPI00954159.1 2266 252.3 6.60 Isoform 1 of Protein ELYS 6.27 16 9 114.87 3.62 7 6 93.62 2.82 4 4 98.09 3.53 5 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AILLPDLSEPNNEPLFSPASEVPR IPI:IPI00954159.1 5 1 CID 120.07 6.86 1.00 1 3 869.11981 2605.34488 -2.33 45.71 5405 5405 MS2 33/92 Linfeng_091811_SIN3A_1.raw High TDTPIESFPTVFAISWGQVK IPI:IPI00954159.1 4 1 CID 64.91 5.20 1.00 1 3 741.71722 2223.13712 1.71 50.36 5881 5881 MS2 24/76 Linfeng_091611_rIgG_1.raw High EISEASENIYSDVR IPI:IPI00954159.1 4 1 CID 95.45 5.13 1.00 1 2 806.37677 1611.74626 -2.15 29.90 3244 3244 MS2 21/26 Linfeng_091611_rIgG_1.raw High EISEASENIYSDVR IPI:IPI00954159.1 4 1 CID 56.39 4.69 1.00 1 2 806.37781 1611.74834 -0.86 31.20 6705 6705 MS2 19/26 Linfeng_081211_IgG_3.raw High SAQQEASADVATPK IPI:IPI00954159.1 4 1 CID 56.23 4.69 1.00 1 2 701.84229 1402.67729 -2.59 19.75 1955 1955 MS2 18/26 Linfeng_091811_SIN3A_1.raw High EISEASENIYSDVR IPI:IPI00954159.1 4 1 CID 72.94 4.65 1.00 1 2 806.37585 1611.74443 -3.29 30.05 3374 3374 MS2 20/26 Linfeng_091811_SIN3A_1.raw High GLSQNQQIPQNSVTPR IPI:IPI00954159.1 4 1 CID 61.42 4.62 1.00 1 2 883.95776 1766.90825 -3.51 25.03 2695 2695 MS2 16/30 Linfeng_091811_SIN3A_1.raw High GLSQNQQIPQNSVTPR IPI:IPI00954159.1 4 1 CID 48.68 4.54 1.00 1 2 883.95935 1766.91142 -1.71 24.98 2595 2595 MS2 17/30 Linfeng_091611_rIgG_1.raw High SAQQEASADVATPK IPI:IPI00954159.1 4 1 CID 55.16 4.53 1.00 1 2 701.84332 1402.67937 -1.11 19.77 1874 1874 MS2 17/26 Linfeng_091611_rIgG_1.raw High VAIAENLLDVIK IPI:IPI00954159.1 4 1 CID 84.80 4.50 1.00 1 2 649.38837 1297.76946 -2.46 43.57 5136 5136 MS2 18/22 Linfeng_091811_SIN3A_1.raw High SVENQESVEIINDLK IPI:IPI00954159.1 4 1 CID 45.11 4.19 1.00 1 2 858.93579 1716.86431 -0.47 37.48 9007 9007 MS2 17/28 Linfeng_081211_IgG_3.raw High SAQQEASADVATPK IPI:IPI00954159.1 4 1 CID 49.63 4.17 1.00 1 2 701.84436 1402.68144 0.37 21.57 3472 3472 MS2 17/26 Linfeng_081211_IgG_3.raw High NLSFNELYPSGTLK IPI:IPI00954159.1 4 1 CID 35.65 4.08 1.00 1 2 791.90985 1582.81243 0.77 46.12 8021 8021 MS2 13/26 Linfeng_081211_IgG_1.raw High SAQQEASADVATPK IPI:IPI00954159.1 4 1 CID 56.50 3.78 1.00 1 2 701.84491 1402.68254 1.15 21.81 3285 3285 MS2 17/26 Linfeng_081211_IgG_2.raw High VAIAENLLDVIK IPI:IPI00954159.1 4 1 CID 48.27 3.60 1.00 1 2 649.39117 1297.77507 1.87 45.06 11545 11545 MS2 16/22 Linfeng_081211_IgG_3.raw High LPFTDTEQEcLVK IPI:IPI00954159.1 4 1 CID C10(Carbamidomethyl) 61.18 3.56 1.00 1 2 790.38837 1579.76946 1.36 35.70 7386 7386 MS2 14/24 Linfeng_081211_IgG_2.raw IPI:IPI00003881.5 415 45.6 5.58 Heterogeneous nuclear ribonucleoprotein F 15.90 15 4 72.79 15.90 8 4 41.50 12.05 4 3 37.45 12.05 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ITGEAFVQFASQELAEK 1 0 CID 55.43 6.81 1.00 1 3 623.31641 1867.93467 -4.84 45.14 5520 5520 MS2 34/64 Linfeng_091811_SIN3A_5.raw High ITGEAFVQFASQELAEK IPI:IPI00003881.5 1 1 CID 78.29 6.34 1.00 1 2 934.47516 1867.94304 -0.36 44.67 10459 10459 MS2 22/32 Linfeng_081211_IgG_5.raw High ITGEAFVQFASQELAEK 1 0 CID 32.64 5.87 1.00 1 3 623.31769 1867.93851 -2.78 44.85 5341 5341 MS2 27/64 Linfeng_091611_rIgG_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 74.93 5.73 1.00 1 2 998.99060 1996.97392 -1.24 46.73 5575 5575 MS2 19/32 Linfeng_091611_rIgG_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 49.66 5.62 1.00 1 3 666.33051 1996.97696 0.29 46.60 5560 5560 MS2 28/64 Linfeng_091611_rIgG_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 42.00 5.46 1.00 1 3 666.32941 1996.97367 -1.36 46.88 5738 5738 MS2 31/64 Linfeng_091811_SIN3A_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 67.33 5.40 1.00 1 2 998.99097 1996.97466 -0.87 46.60 10975 10975 MS2 18/32 Linfeng_081211_IgG_5.raw High HSGPNSADSANDGFVR IPI:IPI00003881.5 1 1 CID 43.79 5.19 1.00 1 3 544.24408 1630.71769 -1.73 21.59 3290 3290 MS2 26/60 Linfeng_081211_IgG_5.raw High HSGPNSADSANDGFVR 1 0 CID 53.48 4.92 1.00 1 3 544.24341 1630.71567 -2.97 20.40 2128 2128 MS2 28/60 Linfeng_091611_rIgG_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 82.94 4.78 1.00 1 2 998.99249 1996.97771 0.66 46.95 11063 11063 MS2 14/32 Linfeng_081211_IgG_5.raw High HSGPNSADSANDGFVR 1 0 CID 38.63 4.61 1.00 1 3 544.24304 1630.71457 -3.64 20.52 2199 2199 MS2 27/60 Linfeng_091811_SIN3A_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 61.64 4.56 1.00 1 3 666.33044 1996.97678 0.19 46.64 10984 10984 MS2 29/64 Linfeng_081211_IgG_5.raw High HSGPNSADSANDGFVR IPI:IPI00003881.5 1 1 CID 23.44 4.30 1.00 1 3 544.24359 1630.71622 -2.63 21.18 3460 3460 MS2 21/60 Linfeng_081211_IgG_6.raw High QSGEAFVELGSEDDVK IPI:IPI00003881.5 1 1 CID 51.02 4.16 1.00 1 2 855.39600 1709.78472 -1.07 33.22 7073 7073 MS2 14/30 Linfeng_081211_IgG_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 67.25 4.12 1.00 1 3 666.33179 1996.98081 2.21 47.39 11595 11595 MS2 23/64 Linfeng_081211_IgG_6.raw IPI:IPI00007047.1 93 10.8 7.03 Protein S100-A8 23.66 9 2 78.77 23.66 8 2 33.07 11.83 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 55.05 4.22 1.00 1 2 711.35779 1421.70830 -0.76 30.13 6178 6178 MS2 16/20 Linfeng_081211_IgG_10.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 50.75 4.09 1.00 1 2 711.35730 1421.70732 -1.44 30.08 6289 6289 MS2 16/20 Linfeng_081211_IgG_8.raw High LLETEcPQYIR 1 0 CID C6(Carbamidomethyl) 71.34 4.08 1.00 1 2 711.35645 1421.70561 -2.65 29.76 3012 3012 MS2 15/20 Linfeng_091611_rIgG_10.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 53.36 3.93 1.00 1 2 711.35785 1421.70842 -0.67 31.30 6740 6740 MS2 15/20 Linfeng_081211_IgG_3.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 43.95 3.91 1.00 1 2 711.35638 1421.70549 -2.73 30.48 6267 6267 MS2 16/20 Linfeng_081211_IgG_6.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 48.28 3.87 1.00 1 2 711.35846 1421.70964 0.19 30.46 6208 6208 MS2 15/20 Linfeng_081211_IgG_4.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 45.67 3.81 1.00 1 2 711.35626 1421.70525 -2.90 39.39 6021 6021 MS2 15/20 Linfeng_081211_IgG_1.raw High LLETEcPQYIR IPI:IPI00007047.1 1 1 CID C6(Carbamidomethyl) 48.28 3.63 1.00 1 2 711.35785 1421.70842 -0.67 30.68 6286 6286 MS2 15/20 Linfeng_081211_IgG_7.raw High ALNSIIDVYHK IPI:IPI00007047.1 1 1 CID 33.64 3.56 1.00 1 2 636.85004 1272.69280 -1.50 32.40 7114 7114 MS2 14/20 Linfeng_081211_IgG_8.raw IPI:IPI00011268.2 307 32.5 9.17 "cDNA FLJ77422, highly similar to Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (Fragment)" 22.15 10 6 83.86 16.61 8 5 55.56 8.79 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AASAIYSGYIFDYDYYR IPI:IPI00641351.1 2 1 CID 106.58 5.97 1.00 1 2 1019.46240 2037.91753 -2.64 42.99 5069 5069 MS2 23/32 Linfeng_091811_SIN3A_6.raw High KSDVETIFSK IPI:IPI00641351.1 5 1 CID 49.51 4.17 1.00 1 2 577.30621 1153.60515 -4.19 27.66 3070 3070 MS2 16/18 Linfeng_091811_SIN3A_6.raw High LEQIAAEQK IPI:IPI00642213.1 4 1 CID 38.85 3.84 1.00 1 2 515.28186 1029.55644 -1.08 20.86 3362 3362 MS2 14/16 Linfeng_081211_IgG_6.raw High KSDVETIFSK IPI:IPI00642213.1 5 1 CID 45.41 3.75 1.00 1 2 577.30786 1153.60845 -1.33 29.34 5891 5891 MS2 13/18 Linfeng_081211_IgG_6.raw High KSDVETIFSK IPI:IPI00642213.1 5 1 CID 49.61 3.54 1.00 1 2 577.30731 1153.60735 -2.28 28.32 5536 5536 MS2 12/18 Linfeng_081211_IgG_6.raw High VFIGNLNTALVK IPI:IPI00642213.1 6 1 CID 63.97 3.51 1.00 2 2 644.88470 1288.76213 -0.22 37.25 8567 8567 MS2 17/22 Linfeng_081211_IgG_6.raw High SNIDALLSR IPI:IPI00642213.1 4 1 CID 17.49 3.50 1.00 1 2 494.77448 988.54167 -0.56 33.16 7171 7171 MS2 14/16 Linfeng_081211_IgG_7.raw High GYAFVQYSNER IPI:IPI00642213.1 5 1 CID 38.42 3.50 1.00 1 2 667.31226 1333.61724 0.05 30.87 6351 6351 MS2 13/20 Linfeng_081211_IgG_7.raw High LEQIAAEQK IPI:IPI00642213.1 4 1 CID 44.40 3.48 1.00 1 2 515.28253 1029.55779 0.23 21.45 3362 3362 MS2 14/16 Linfeng_081211_IgG_7.raw High GYAFVQYSNER IPI:IPI00642213.1 5 1 CID 57.52 3.47 1.00 1 2 667.31378 1333.62029 2.34 30.58 6309 6309 MS2 15/20 Linfeng_081211_IgG_6.raw IPI:IPI00013933.2 2871 331.6 6.81 Isoform DPI of Desmoplakin 2.79 8 6 619.34 2.79 8 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ITNLTQQLEQASIVK IPI:IPI00013933.2 1 1 CID 104.04 5.73 1.00 1 2 843.47522 1685.94316 -0.08 45.48 7824 7824 MS2 21/28 Linfeng_081211_IgG_1.raw High LLEAQIATGGIIDPK IPI:IPI00013933.2 3 1 CID 53.17 4.31 1.00 1 2 769.94342 1538.87956 0.42 37.61 9058 9058 MS2 18/28 Linfeng_081211_IgG_3.raw High GFFDPNTEENLTYLQLK IPI:IPI00013933.2 3 1 CID 49.93 4.12 1.00 1 2 1015.00165 2028.99602 2.29 44.19 10681 10681 MS2 17/32 Linfeng_081211_IgG_8.raw High QLQNIIQATSR IPI:IPI00013933.2 3 1 CID 55.02 3.68 1.00 1 2 636.35736 1271.70745 0.61 31.45 6799 6799 MS2 14/20 Linfeng_081211_IgG_3.raw High QLQNIIQATSR IPI:IPI00013933.2 3 1 CID 31.42 3.63 1.00 1 2 636.35565 1271.70403 -2.08 30.06 6285 6285 MS2 13/20 Linfeng_081211_IgG_8.raw High YEVTSGGGGTSR IPI:IPI00013933.2 3 1 CID 79.76 3.60 1.00 1 2 585.77344 1170.53960 0.85 18.26 2572 2572 MS2 19/22 Linfeng_081211_IgG_8.raw High AELIVQPELK IPI:IPI00013933.2 4 1 CID 43.23 3.52 1.00 1 2 570.33710 1139.66692 -0.17 33.46 7563 7563 MS2 12/18 Linfeng_081211_IgG_3.raw High YEVTSGGGGTSR IPI:IPI00013933.2 3 1 CID 26.14 3.49 1.00 1 2 585.77234 1170.53740 -1.03 18.90 2514 2514 MS2 15/22 Linfeng_081211_IgG_5.raw IPI:IPI00514561.1 428 47.5 5.63 Heterogeneous nuclear ribonucleoprotein K 18.22 10 5 74.68 18.22 8 5 30.19 9.35 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IITITGTQDQIQNAQYLLQNSVK 5 0 CID 94.43 8.41 1.00 1 3 863.79767 2589.37845 -3.82 43.46 5213 5213 MS2 32/88 Linfeng_091611_rIgG_4.raw High IITITGTQDQIQNAQYLLQNSVK IPI:IPI00514561.1 5 1 CID 107.70 8.07 1.00 1 3 863.79932 2589.38340 -1.91 43.10 10033 10033 MS2 36/88 Linfeng_081211_IgG_5.raw High LLIHQSLAGGIIGVK IPI:IPI00514561.1 6 1 CID 94.20 4.70 1.00 1 3 506.98364 1518.93637 -0.22 35.07 7740 7740 MS2 30/56 Linfeng_081211_IgG_5.raw High TDYNASVSVPDSSGPER 5 0 CID 78.01 4.65 1.00 1 2 890.89825 1780.78923 -5.19 26.49 2984 2984 MS2 21/32 Linfeng_091611_rIgG_4.raw High IILDLISESPIK IPI:IPI00514561.1 6 1 CID 67.01 4.57 1.00 1 2 670.90485 1340.80242 -0.89 43.22 10060 10060 MS2 19/22 Linfeng_081211_IgG_5.raw High TDYNASVSVPDSSGPER IPI:IPI00514561.1 5 1 CID 71.34 4.31 1.00 1 2 890.90106 1780.79485 -2.04 27.22 4981 4981 MS2 19/32 Linfeng_081211_IgG_5.raw High IILDLISESPIK IPI:IPI00514561.1 6 1 CID 56.55 4.24 1.00 1 2 670.90729 1340.80730 2.75 44.56 10787 10787 MS2 15/22 Linfeng_081211_IgG_6.raw High IILDLISESPIK IPI:IPI00514561.1 6 1 CID 28.60 4.04 1.00 1 2 670.90576 1340.80425 0.47 43.55 10616 10616 MS2 15/22 Linfeng_081211_IgG_7.raw High IDEPLEGSEDR IPI:IPI00514561.1 5 1 CID 75.38 3.93 1.00 1 2 630.28961 1259.57195 -2.48 25.04 4617 4617 MS2 18/20 Linfeng_081211_IgG_6.raw High IILDLISESPIK IPI:IPI00514561.1 6 1 CID 50.41 3.85 1.00 1 2 670.90759 1340.80791 3.21 43.13 10417 10417 MS2 17/22 Linfeng_081211_IgG_10.raw IPI:IPI00550731.2 239 26.2 8.06 Putative uncharacterized protein 35.15 32 5 65.90 28.03 8 4 63.06 28.03 9 4 99.61 29.71 15 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 120.66 7.02 1.00 1 3 712.65680 2135.95584 -6.07 22.50 2139 2139 MS2 33/76 Linfeng_091811_SIN3A_7.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 300.00 6.63 1.00 1 2 1068.48120 2135.95513 -6.41 22.56 2228 2228 MS2 25/38 Linfeng_091811_SIN3A_8.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 115.92 6.63 1.00 1 3 712.65625 2135.95420 -6.84 22.50 2219 2219 MS2 34/76 Linfeng_091811_SIN3A_8.raw High VDNALQSGNSQESVTEQDSK 8 0 CID 119.16 6.61 1.00 1 3 712.65656 2135.95511 -6.41 22.37 2495 2495 MS2 33/76 Linfeng_091611_rIgG_8.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 65.10 6.57 1.00 1 3 712.65643 2135.95475 -6.58 22.65 2291 2291 MS2 31/76 Linfeng_091811_SIN3A_9.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00550731.2 8 1 CID 121.36 6.54 1.00 1 2 1068.48596 2135.96465 -1.95 22.75 4007 4007 MS2 27/38 Linfeng_081211_IgG_8.raw High VDNALQSGNSQESVTEQDSK 8 0 CID 300.00 6.41 1.00 1 2 1068.48242 2135.95757 -5.26 22.46 2507 2507 MS2 24/38 Linfeng_091611_rIgG_8.raw High VDNALQSGNSQESVTEQDSK 8 0 CID 132.75 6.07 1.00 1 3 712.65765 2135.95841 -4.87 22.46 2314 2314 MS2 31/76 Linfeng_091611_rIgG_7.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 105.46 6.07 1.00 1 3 712.65717 2135.95694 -5.56 22.57 2167 2167 MS2 32/76 Linfeng_091811_SIN3A_10.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00550731.2 8 1 CID 80.11 5.95 1.00 1 3 712.65955 2135.96408 -2.21 22.76 4011 4011 MS2 27/76 Linfeng_081211_IgG_8.raw High VDNALQSGNSQESVTEQDSK IPI:IPI00853045.1 8 1 CID 121.11 5.71 1.00 1 3 712.65771 2135.95859 -4.78 22.49 2338 2338 MS2 27/76 Linfeng_091811_SIN3A_1.raw High TVAAPSVFIFPPSDEQLK 9 0 CID 89.68 5.44 1.00 1 2 973.51550 1946.02373 -1.71 41.57 5055 5055 MS2 14/34 Linfeng_091611_rIgG_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00853045.1 9 1 CID 63.12 5.16 1.00 1 2 973.51508 1946.02287 -2.15 43.20 4940 4940 MS2 15/34 Linfeng_091811_SIN3A_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00853045.1 9 1 CID 97.54 4.92 1.00 1 2 973.51544 1946.02361 -1.77 41.96 4784 4784 MS2 16/34 Linfeng_091811_SIN3A_8.raw High SGTASVVcLLNNFYPR 9 0 CID C8(Carbamidomethyl) 19.85 4.88 1.00 1 3 599.96881 1797.89188 -1.90 45.63 5568 5568 MS2 22/60 Linfeng_091611_rIgG_8.raw High SGTASVVcLLNNFYPR IPI:IPI00550731.2 9 1 CID C8(Carbamidomethyl) 38.58 4.78 1.00 1 2 899.45020 1797.89311 -1.21 47.07 11392 11392 MS2 17/30 Linfeng_081211_IgG_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00853045.1 9 1 CID 59.73 4.71 1.00 1 3 649.34570 1946.02256 -2.31 42.04 4729 4729 MS2 25/68 Linfeng_091811_SIN3A_7.raw High SGTASVVcLLNNFYPR IPI:IPI00853045.1 9 1 CID C8(Carbamidomethyl) 26.93 4.69 1.00 1 3 599.96838 1797.89060 -2.61 46.27 5374 5374 MS2 24/60 Linfeng_091811_SIN3A_9.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00853045.1 9 1 CID 44.94 4.65 1.00 1 3 649.34564 1946.02237 -2.40 42.07 4852 4852 MS2 27/68 Linfeng_091811_SIN3A_9.raw High SGTASVVcLLNNFYPR IPI:IPI00853045.1 9 1 CID C8(Carbamidomethyl) 23.73 4.61 1.00 1 3 599.96912 1797.89280 -1.39 45.99 5287 5287 MS2 25/60 Linfeng_091811_SIN3A_8.raw High TVAAPSVFIFPPSDEQLK 9 0 CID 59.16 4.60 1.00 1 3 649.34570 1946.02256 -2.31 41.56 5054 5054 MS2 27/68 Linfeng_091611_rIgG_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00550731.2 9 1 CID 86.58 4.47 1.00 1 2 973.51605 1946.02483 -1.14 41.83 10084 10084 MS2 17/34 Linfeng_081211_IgG_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00853045.1 9 1 CID 51.59 4.44 1.00 1 3 649.34558 1946.02219 -2.50 43.08 4925 4925 MS2 27/68 Linfeng_091811_SIN3A_8.raw High SGTASVVcLLNNFYPR IPI:IPI00853045.1 9 1 CID C8(Carbamidomethyl) 20.12 4.37 1.00 1 3 599.96918 1797.89298 -1.29 46.47 5286 5286 MS2 22/60 Linfeng_091811_SIN3A_7.raw High VYAcEVTHQGLSSPVTK IPI:IPI00853045.1 8 1 CID C4(Carbamidomethyl) 88.97 4.36 1.00 1 3 625.97681 1875.91587 -5.93 25.91 2683 2683 MS2 27/64 Linfeng_091811_SIN3A_8.raw High SGTASVVcLLNNFYPR IPI:IPI00550731.2 9 1 CID C8(Carbamidomethyl) 25.35 4.31 1.00 1 3 599.96936 1797.89353 -0.98 46.91 11350 11350 MS2 22/60 Linfeng_081211_IgG_8.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00550731.2 9 1 CID 16.00 4.25 1.00 1 3 649.34735 1946.02750 0.23 41.84 10104 10104 MS2 20/68 Linfeng_081211_IgG_7.raw High FSGSGSGTDFTLK 14 0 CID 63.14 4.16 1.00 1 2 652.31116 1303.61504 -1.15 29.46 3187 3187 MS2 18/24 Linfeng_091611_rIgG_9.raw High FSGSGSGTDFTLK 14 0 CID 68.90 4.09 1.00 1 2 652.31024 1303.61321 -2.55 29.37 3456 3456 MS2 19/24 Linfeng_091611_rIgG_8.raw High FSGSGSGTDFTLK 14 0 CID 54.90 4.06 1.00 1 2 652.31067 1303.61406 -1.89 29.55 3279 3279 MS2 18/24 Linfeng_091611_rIgG_7.raw High TVAAPSVFIFPPSDEQLK IPI:IPI00550731.2 9 1 CID 102.68 4.02 1.00 1 2 973.51740 1946.02751 0.24 42.15 10158 10158 MS2 12/34 Linfeng_081211_IgG_8.raw High FSGSGSGTDFTLK IPI:IPI00550731.2 14 1 CID 68.80 3.81 1.00 1 2 652.31042 1303.61357 -2.27 29.87 6215 6215 MS2 19/24 Linfeng_081211_IgG_8.raw IPI:IPI00607550.3 719 82.0 7.85 U3 small nucleolar RNA-associated protein 14 homolog A isoform 2 15.58 13 8 88.81 14.05 8 7 16.75 2.64 1 1 64.04 7.79 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VSEFNVSSEGSGEK IPI:IPI00607550.3 2 1 CID 98.93 5.38 1.00 1 2 728.33154 1455.65581 -2.78 24.43 2607 2607 MS2 21/26 Linfeng_091811_SIN3A_3.raw High LAESLLALSQQEELADLPK IPI:IPI00607550.3 2 1 CID 65.94 5.31 1.00 1 3 690.04547 2068.12186 2.19 43.65 11085 11085 MS2 24/72 Linfeng_081211_IgG_3.raw High SELSQDAEPAGSQETK IPI:IPI00607550.3 4 1 CID 111.53 5.28 1.00 1 2 838.88324 1676.75920 -1.10 20.51 2060 2060 MS2 23/30 Linfeng_091811_SIN3A_3.raw High LAESLLALSQQEELADLPK 2 0 CID 36.89 5.23 1.00 1 2 1034.55933 2068.11138 -2.88 42.68 4487 4487 MS2 15/36 Linfeng_091611_rIgG_3.raw High SELSQDAEPAGSQETK IPI:IPI00607550.3 4 1 CID 112.59 4.98 1.00 1 2 838.88403 1676.76079 -0.15 22.04 3632 3632 MS2 19/30 Linfeng_081211_IgG_3.raw High NKQPVTDPLLTPVEK IPI:IPI00607550.3 4 1 CID 68.44 4.70 1.00 1 3 560.31592 1678.93320 -2.56 29.24 3274 3274 MS2 26/56 Linfeng_091811_SIN3A_3.raw High VSEFNVSSEGSGEK IPI:IPI00607550.3 2 1 CID 60.45 4.49 1.00 1 2 728.33209 1455.65691 -2.03 25.88 4946 4946 MS2 19/26 Linfeng_081211_IgG_3.raw High NKQPVTDPLLTPVEK IPI:IPI00607550.3 4 1 CID 84.39 4.22 1.00 1 3 560.31702 1678.93650 -0.59 31.33 6753 6753 MS2 27/56 Linfeng_081211_IgG_3.raw High LLEAISSLDGK IPI:IPI00607550.3 2 1 CID 47.80 4.12 1.00 1 2 573.32367 1145.64006 -1.07 35.83 8446 8446 MS2 17/20 Linfeng_081211_IgG_3.raw High DSGSQEVLSELR IPI:IPI00607550.3 4 1 CID 43.71 4.11 1.00 1 2 660.32581 1319.64433 0.40 34.18 7825 7825 MS2 15/22 Linfeng_081211_IgG_3.raw High LVLADLLEPVK IPI:IPI00607550.3 3 1 CID 66.69 4.09 1.00 1 2 605.37506 1209.74285 -2.09 45.04 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_3.raw High LLEAISSLDGK IPI:IPI00607550.3 2 1 CID 45.72 3.91 1.00 1 2 573.32404 1145.64079 -0.43 34.56 7978 7978 MS2 15/20 Linfeng_081211_IgG_3.raw High TIQTPIGSTWNTQR IPI:IPI00607550.3 5 1 CID 22.03 3.51 1.00 1 2 801.91443 1602.82158 -1.20 33.33 7509 7509 MS2 14/26 Linfeng_081211_IgG_3.raw IPI:IPI00744148.2 369 39.2 9.83 Isoform 1 of Core histone macro-H2A.1 31.98 21 8 106.56 21.14 8 5 79.15 20.33 6 4 83.66 18.16 7 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 92.44 7.31 1.00 1 2 1064.00574 2127.00420 -2.21 33.73 3893 3893 MS2 22/42 Linfeng_091611_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 77.47 7.17 1.00 1 2 1064.00549 2127.00371 -2.44 33.84 3895 3895 MS2 24/42 Linfeng_091811_SIN3A_6.raw High FVIHcNSPVWGADKcEELLEK IPI:IPI00744148.2 5 1 CID "C5(Carbamidomethyl), C15(Carbamidomethyl)" 77.05 6.65 1.00 1 3 844.40442 2531.19870 -2.83 33.89 3913 3913 MS2 27/80 Linfeng_091611_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 93.00 6.38 1.00 1 2 1064.00586 2127.00444 -2.10 34.08 7401 7401 MS2 19/42 Linfeng_081211_IgG_5.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 138.41 6.19 1.00 1 2 1064.00525 2127.00322 -2.67 32.72 3751 3751 MS2 23/42 Linfeng_091811_SIN3A_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 94.62 5.86 1.00 1 2 1064.00891 2127.01055 0.77 33.92 7453 7453 MS2 23/42 Linfeng_081211_IgG_6.raw High HILLAVANDEELNQLLK IPI:IPI00744148.2 5 1 CID 88.14 5.79 1.00 1 3 645.02802 1933.06949 -3.05 41.23 4845 4845 MS2 31/64 Linfeng_091811_SIN3A_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 50.28 5.53 1.00 1 3 709.67242 2127.00272 -2.91 33.73 3892 3892 MS2 33/84 Linfeng_091611_rIgG_6.raw High AISSYFVSTmSSSIK IPI:IPI00744148.2 5 1 CID M10(Oxidation) 96.59 5.19 1.00 1 2 812.39941 1623.79155 -1.20 33.59 7339 7339 MS2 18/28 Linfeng_081211_IgG_6.raw High HILLAVANDEELNQLLK IPI:IPI00744148.2 5 1 CID 70.45 5.18 1.00 1 3 645.02783 1933.06894 -3.34 41.41 4648 4648 MS2 29/64 Linfeng_091811_SIN3A_7.raw High AISSYFVSTmSSSIK IPI:IPI00744148.2 5 1 CID M10(Oxidation) 44.80 5.14 1.00 1 2 812.39813 1623.78899 -2.78 33.18 3821 3821 MS2 22/28 Linfeng_091611_rIgG_6.raw High HILLAVANDEELNQLLK IPI:IPI00744148.2 5 1 CID 69.92 5.06 1.00 1 3 645.02881 1933.07187 -1.82 41.10 4772 4772 MS2 28/64 Linfeng_091611_rIgG_7.raw High NGPLEVAGAAVSAGHGLPAK IPI:IPI00744148.2 5 1 CID 104.09 5.06 1.00 1 2 908.48901 1815.97075 -0.29 36.13 8202 8202 MS2 18/38 Linfeng_081211_IgG_6.raw High HILLAVANDEELNQLLK IPI:IPI00744148.2 5 1 CID 80.05 5.06 1.00 1 3 645.02856 1933.07114 -2.20 40.98 4836 4836 MS2 30/64 Linfeng_091611_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 47.92 4.48 1.00 1 2 1064.00671 2127.00615 -1.29 32.75 7046 7046 MS2 17/42 Linfeng_081211_IgG_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 70.04 4.45 1.00 1 3 709.67200 2127.00144 -3.51 33.90 3902 3902 MS2 31/84 Linfeng_091811_SIN3A_6.raw High AASADSTTEGTPADGFTVLSTK IPI:IPI00744148.2 3 1 CID 10.59 4.44 1.00 1 3 709.67487 2127.01004 0.54 33.95 7464 7464 MS2 26/84 Linfeng_081211_IgG_6.raw High GKLEAIITPPPAK IPI:IPI00744148.2 4 1 CID 81.33 4.18 1.00 1 2 667.90314 1334.79900 -3.97 28.52 3188 3188 MS2 18/24 Linfeng_091811_SIN3A_6.raw High AISSYFVSTmSSSIK IPI:IPI00744148.2 5 1 CID M10(Oxidation) 45.69 4.09 1.00 1 2 812.39807 1623.78887 -2.86 33.46 3846 3846 MS2 20/28 Linfeng_091811_SIN3A_6.raw High EFVEAVLELR IPI:IPI00744148.2 5 1 CID 40.64 3.82 1.00 1 2 602.83160 1204.65593 -1.12 41.72 9668 9668 MS2 16/18 Linfeng_081211_IgG_5.raw High LEAIITPPPAK IPI:IPI00744148.2 4 1 CID 29.60 3.48 1.00 1 2 575.34680 1149.68633 -1.33 30.22 6181 6181 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00784295.2 732 84.6 5.02 Isoform 1 of Heat shock protein HSP 90-alpha 10.38 10 6 112.66 10.38 8 6 61.31 3.96 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NPDDITNEEYGEFYK 3 0 CID 112.76 5.44 1.00 1 2 917.39288 1833.77849 -1.60 33.53 3845 3845 MS2 22/28 Linfeng_091811_SIN3A_3.raw High NPDDITNEEYGEFYK IPI:IPI00784295.2 3 1 CID 124.74 5.39 1.00 1 2 917.39575 1833.78423 1.53 34.39 7911 7911 MS2 21/28 Linfeng_081211_IgG_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 78.45 5.26 1.00 1 2 757.39581 1513.78435 -0.92 36.67 8719 8719 MS2 22/26 Linfeng_081211_IgG_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6 7 1 CID 69.88 4.72 1.00 1 2 757.39117 1513.77507 -7.05 35.75 4134 4134 MS2 21/26 Linfeng_091811_SIN3A_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 70.30 4.68 1.00 1 2 757.39648 1513.78569 -0.03 36.13 8201 8201 MS2 19/26 Linfeng_081211_IgG_6.raw High TLTIVDTGIGmTK IPI:IPI00784295.2 4 1 CID M11(Oxidation) 61.25 4.06 1.00 2 2 683.36670 1365.72612 -2.45 33.80 7686 7686 MS2 17/24 Linfeng_081211_IgG_3.raw High TLTIVDTGIGmTK IPI:IPI00784295.2 4 1 CID M11(Oxidation) 49.56 4.01 1.00 2 2 683.36780 1365.72832 -0.84 33.81 7401 7401 MS2 17/24 Linfeng_081211_IgG_7.raw High ADLINNLGTIAK IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 30.56 3.64 1.00 1 2 621.85516 1242.70305 -1.80 35.39 7910 7910 MS2 17/22 Linfeng_081211_IgG_10.raw High EDQTEYLEER IPI:IPI00414676.6;IPI:IPI00784295.2 6 2 CID 44.86 3.59 1.00 1 2 656.28766 1311.56804 -1.46 26.78 5240 5240 MS2 14/18 Linfeng_081211_IgG_3.raw High ELISNSSDALDK IPI:IPI00784295.2 4 1 CID 55.58 3.54 1.00 1 2 646.32123 1291.63518 -1.92 28.05 5604 5604 MS2 16/22 Linfeng_081211_IgG_3.raw IPI:IPI00843764.2 247 26.7 6.10 Isoform C of Trypsin-3 5.26 26 1 43.51 5.26 8 1 40.63 5.26 9 1 47.92 5.26 9 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VLEGNEQFINAAK 5 0 CID 74.36 4.70 1.00 1 2 716.87372 1432.74016 -2.08 29.50 3272 3272 MS2 20/24 Linfeng_091611_rIgG_7.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 68.95 4.69 1.00 1 2 716.87274 1432.73821 -3.44 29.79 3163 3163 MS2 21/24 Linfeng_091811_SIN3A_10.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 69.31 4.65 1.00 1 2 716.87280 1432.73833 -3.36 29.79 3378 3378 MS2 21/24 Linfeng_091811_SIN3A_4.raw High VLEGNEQFINAAK 5 0 CID 73.64 4.63 1.00 1 2 716.87329 1432.73931 -2.68 29.49 2978 2978 MS2 20/24 Linfeng_091611_rIgG_10.raw High VLEGNEQFINAAK 5 0 CID 45.10 4.62 1.00 1 2 716.87463 1432.74199 -0.80 38.16 5688 5688 MS2 14/24 Linfeng_081211_IgG_1.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 70.79 4.61 1.00 1 2 716.87256 1432.73784 -3.70 29.53 3303 3303 MS2 20/24 Linfeng_091811_SIN3A_1.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 75.28 4.60 1.00 1 2 716.87250 1432.73772 -3.78 29.74 3131 3131 MS2 20/24 Linfeng_091811_SIN3A_7.raw High VLEGNEQFINAAK 5 0 CID 75.52 4.60 1.00 1 2 716.87341 1432.73955 -2.51 29.52 3476 3476 MS2 20/24 Linfeng_091611_rIgG_8.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 63.02 4.59 1.00 1 2 716.87256 1432.73784 -3.70 29.73 3254 3254 MS2 20/24 Linfeng_091811_SIN3A_9.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 72.89 4.58 1.00 1 2 716.87244 1432.73760 -3.87 29.85 3212 3212 MS2 20/24 Linfeng_091811_SIN3A_8.raw High VLEGNEQFINAAK 5 0 CID 70.05 4.58 1.00 1 2 716.87311 1432.73894 -2.93 29.37 3173 3173 MS2 20/24 Linfeng_091611_rIgG_1.raw High VLEGNEQFINAAK 5 0 CID 91.02 4.57 1.00 1 2 716.87482 1432.74236 -0.55 30.93 6612 6612 MS2 19/24 Linfeng_081211_IgG_3.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 72.48 4.56 1.00 1 2 716.87305 1432.73882 -3.02 29.77 3358 3358 MS2 21/24 Linfeng_091811_SIN3A_6.raw High VLEGNEQFINAAK 5 0 CID 58.95 4.54 1.00 1 2 716.87408 1432.74089 -1.57 29.77 6175 6175 MS2 20/24 Linfeng_081211_IgG_8.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 71.55 4.50 1.00 1 2 716.87311 1432.73894 -2.93 29.65 3282 3282 MS2 20/24 Linfeng_091811_SIN3A_2.raw High VLEGNEQFINAAK 5 0 CID 76.89 4.48 1.00 1 2 716.87299 1432.73870 -3.10 29.54 3204 3204 MS2 21/24 Linfeng_091611_rIgG_2.raw High VLEGNEQFINAAK 5 0 CID 72.49 4.45 1.00 1 2 716.87378 1432.74028 -2.00 29.43 3182 3182 MS2 20/24 Linfeng_091611_rIgG_9.raw High VLEGNEQFINAAK 5 0 CID 80.52 4.45 1.00 1 2 716.87354 1432.73979 -2.34 29.59 3345 3345 MS2 20/24 Linfeng_091611_rIgG_6.raw High VLEGNEQFINAAK 5 0 CID 77.04 4.44 1.00 1 2 716.87537 1432.74346 0.22 30.24 6129 6129 MS2 20/24 Linfeng_081211_IgG_7.raw High VLEGNEQFINAAK 5 0 CID 64.48 4.40 1.00 1 2 716.87280 1432.73833 -3.36 29.40 3379 3379 MS2 21/24 Linfeng_091611_rIgG_4.raw High VLEGNEQFINAAK 5 0 CID 44.43 4.34 1.00 1 2 716.87335 1432.73943 -2.59 29.37 2796 2796 MS2 18/24 Linfeng_091611_rIgG_3.raw High VLEGNEQFINAAK 5 0 CID 60.36 4.31 1.00 1 2 716.87421 1432.74114 -1.40 29.85 6082 6082 MS2 18/24 Linfeng_081211_IgG_10.raw High VLEGNEQFINAAK IPI:IPI00843764.2 5 1 CID 74.71 4.30 1.00 1 2 716.87366 1432.74004 -2.17 29.58 3321 3321 MS2 21/24 Linfeng_091811_SIN3A_3.raw High VLEGNEQFINAAK 5 0 CID 89.67 4.30 1.00 1 2 716.87384 1432.74040 -1.91 30.13 6156 6156 MS2 21/24 Linfeng_081211_IgG_6.raw High VLEGNEQFINAAK 5 0 CID 57.09 4.29 1.00 1 2 716.87488 1432.74248 -0.46 30.21 6018 6018 MS2 19/24 Linfeng_081211_IgG_5.raw High VLEGNEQFINAAK 5 0 CID 34.71 4.22 1.00 1 2 716.87543 1432.74358 0.30 31.40 6150 6150 MS2 18/24 Linfeng_081211_IgG_2.raw IPI:IPI00007752.1 445 49.8 4.89 Tubulin beta-2C chain 24.49 18 7 69.46 11.69 9 4 34.48 9.44 3 3 68.61 22.25 6 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGPFGQIFRPDNFVFGQSGAGNNWAK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 107.08 5.90 1.00 1 3 933.45209 2798.34171 -0.64 43.94 5367 5367 MS2 31/100 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR 11 0 CID 44.35 5.29 1.00 1 3 653.66309 1958.97470 -3.66 44.42 5287 5287 MS2 25/68 Linfeng_091611_rIgG_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00645452.1 11 1 CID 59.62 5.09 1.00 1 3 653.66589 1958.98313 0.64 45.32 10630 10630 MS2 25/68 Linfeng_081211_IgG_5.raw High NSSYFVEWIPNNVK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 22 3 CID 49.93 4.63 1.00 1 2 848.91589 1696.82451 -5.00 41.12 4998 4998 MS2 13/26 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00908770.1 10 3 CID M6(Oxidation) 46.21 4.63 1.00 1 2 731.84351 1462.67974 -3.13 22.98 2540 2540 MS2 17/22 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 44.89 4.63 1.00 1 3 653.66254 1958.97306 -4.50 44.71 5466 5466 MS2 26/68 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK 10 0 CID M6(Oxidation) 44.12 4.61 1.00 1 2 731.84430 1462.68132 -2.04 22.86 2461 2461 MS2 16/22 Linfeng_091611_rIgG_5.raw High EIVHLQAGQcGNQIGAK IPI:IPI00007752.1 5 1 CID C10(Carbamidomethyl) 55.61 4.40 1.00 2 3 608.31006 1822.91562 -4.01 25.70 2919 2919 MS2 29/64 Linfeng_091811_SIN3A_5.raw High ImNTFSVVPSPK 11 0 CID M2(Oxidation) 31.89 4.37 1.00 1 2 668.35040 1335.69353 -3.17 31.10 3566 3566 MS2 17/22 Linfeng_091611_rIgG_5.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 54.77 4.32 1.00 1 2 731.84503 1462.68279 -1.04 23.71 3954 3954 MS2 17/22 Linfeng_081211_IgG_5.raw High ImNTFSVVPSPK IPI:IPI00645452.1 11 1 CID M2(Oxidation) 43.01 4.15 1.00 1 2 668.35248 1335.69768 -0.07 31.86 6726 6726 MS2 14/22 Linfeng_081211_IgG_6.raw High ImNTFSVVPSPK IPI:IPI00007752.1;IPI:IPI00647896.1 11 2 CID M2(Oxidation) 30.86 4.15 1.00 1 2 668.34973 1335.69219 -4.18 31.27 3682 3682 MS2 18/22 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 37.05 4.14 1.00 1 2 731.84570 1462.68413 -0.12 23.59 4168 4168 MS2 15/22 Linfeng_081211_IgG_10.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 19.56 4.07 1.00 1 2 580.31702 1159.62676 -2.19 33.68 7245 7245 MS2 14/18 Linfeng_081211_IgG_5.raw High ImNTFSVVPSPK IPI:IPI00645452.1 11 1 CID M2(Oxidation) 29.77 4.06 1.00 1 2 668.35144 1335.69560 -1.62 31.76 6536 6536 MS2 15/22 Linfeng_081211_IgG_5.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 21.87 3.81 1.00 1 2 580.31836 1159.62944 0.13 34.04 7496 7496 MS2 15/18 Linfeng_081211_IgG_6.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 25.63 3.75 1.00 1 2 580.31824 1159.62920 -0.08 33.77 7387 7387 MS2 12/18 Linfeng_081211_IgG_7.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 57.93 3.51 1.00 1 2 731.84473 1462.68218 -1.46 23.42 4158 4158 MS2 14/22 Linfeng_081211_IgG_6.raw IPI:IPI00654555.3 845 92.8 9.19 NOP2 protein 16.33 17 9 103.24 12.90 9 8 24.71 1.66 1 1 72.58 13.49 7 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TQASSSFQDSSQPAGK IPI:IPI00654555.3 4 1 CID 101.68 5.97 1.00 1 2 813.37256 1625.73784 -1.47 19.03 1849 1849 MS2 22/30 Linfeng_091811_SIN3A_3.raw High NTGVILANDANAER IPI:IPI00654555.3 3 1 CID 74.18 5.78 1.00 1 2 729.36700 1457.72673 -5.24 25.99 2827 2827 MS2 23/26 Linfeng_091811_SIN3A_3.raw High NTGVILANDANAER IPI:IPI00654555.3 3 1 CID 59.31 5.26 1.00 1 2 729.36914 1457.73100 -2.31 27.51 5475 5475 MS2 23/26 Linfeng_081211_IgG_3.raw High ELLLSAIDSVNATSK IPI:IPI00654555.3 3 1 CID 68.97 5.15 1.00 1 2 780.92816 1560.84905 0.67 41.15 10234 10234 MS2 20/28 Linfeng_081211_IgG_3.raw High TQASSSFQDSSQPAGK IPI:IPI00654555.3 4 1 CID 30.36 5.14 1.00 1 3 542.58575 1625.74271 1.52 20.77 3187 3187 MS2 25/60 Linfeng_081211_IgG_3.raw High VLLDAPcSGTGVISK IPI:IPI00654555.3 3 1 CID C7(Carbamidomethyl) 113.67 4.89 1.00 1 2 758.90344 1516.79961 -2.92 31.18 3535 3535 MS2 21/28 Linfeng_091811_SIN3A_3.raw High TQASSSFQDSSQPAGK IPI:IPI00654555.3 4 1 CID 100.24 4.84 1.00 1 2 813.37402 1625.74077 0.33 20.68 3153 3153 MS2 19/30 Linfeng_081211_IgG_3.raw High NTGVILANDANAER 3 0 CID 72.78 4.81 1.00 1 2 729.36884 1457.73039 -2.73 25.84 2337 2337 MS2 21/26 Linfeng_091611_rIgG_3.raw High GADSELSTVPSVTK IPI:IPI00654555.3 4 1 CID 52.34 4.78 1.00 1 2 695.85486 1390.70244 -2.62 27.68 3061 3061 MS2 20/26 Linfeng_091811_SIN3A_3.raw High FSNSIPQSQTGNSETATPTNVDLPQVIPK IPI:IPI00654555.3 4 1 CID 60.06 4.54 1.00 1 3 1024.18005 3070.52561 -2.37 36.76 4266 4266 MS2 25/112 Linfeng_091811_SIN3A_3.raw High GTDTQTPAVLSPSK IPI:IPI00654555.3 3 1 CID 28.23 4.38 1.00 1 2 701.36328 1401.71929 -1.98 26.26 5077 5077 MS2 13/26 Linfeng_081211_IgG_3.raw High GTDTQTPAVLSPSK IPI:IPI00654555.3 3 1 CID 83.02 4.35 1.00 1 2 701.36304 1401.71880 -2.33 24.89 2671 2671 MS2 18/26 Linfeng_091811_SIN3A_3.raw High GADSELSTVPSVTK IPI:IPI00654555.3 4 1 CID 55.08 4.22 1.00 1 2 695.85626 1390.70525 -0.60 29.06 5908 5908 MS2 16/26 Linfeng_081211_IgG_3.raw High GISAGAVQTAGK IPI:IPI00654555.3 3 1 CID 54.79 4.12 1.00 1 2 530.29236 1059.57744 -1.81 20.52 2061 2061 MS2 19/22 Linfeng_091811_SIN3A_3.raw High VLLDAPcSGTGVISK IPI:IPI00654555.3 3 1 CID C7(Carbamidomethyl) 102.18 4.03 1.00 1 2 758.90411 1516.80095 -2.03 32.41 7161 7161 MS2 18/28 Linfeng_081211_IgG_3.raw High GISAGAVQTAGK IPI:IPI00654555.3 3 1 CID 64.07 3.94 1.00 1 2 530.29315 1059.57903 -0.32 22.26 3700 3700 MS2 19/22 Linfeng_081211_IgG_3.raw High IQDIVGILR IPI:IPI00654555.3 3 1 CID 48.35 3.75 1.00 1 2 513.81940 1026.63152 0.83 38.04 9208 9208 MS2 15/16 Linfeng_081211_IgG_3.raw IPI:IPI00908770.1 317 35.9 4.93 "cDNA FLJ53063, highly similar to Tubulin beta-7 chain" 26.18 16 6 72.69 15.46 9 4 36.37 9.15 2 2 62.89 14.51 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 70.71 5.36 1.00 1 3 629.32684 1885.96598 -3.67 45.83 5608 5608 MS2 31/64 Linfeng_091811_SIN3A_5.raw High MAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID 93.34 5.18 1.00 1 3 623.99597 1869.97336 -2.48 47.82 5856 5856 MS2 37/64 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00908770.1 10 3 CID M6(Oxidation) 46.21 4.63 1.00 1 2 731.84351 1462.67974 -3.13 22.98 2540 2540 MS2 17/22 Linfeng_091811_SIN3A_5.raw High MAVTFIGNSTAIQELFK 5 0 CID 65.95 4.62 1.00 1 3 623.99622 1869.97409 -2.08 47.47 5666 5666 MS2 35/64 Linfeng_091611_rIgG_5.raw High EVDEQmLNVQNK 10 0 CID M6(Oxidation) 44.12 4.61 1.00 1 2 731.84430 1462.68132 -2.04 22.86 2461 2461 MS2 16/22 Linfeng_091611_rIgG_5.raw High EIVHIQAGQcGNQIGAK IPI:IPI00908770.1;IPI:IPI00953417.1 6 2 CID C10(Carbamidomethyl) 55.61 4.40 1.00 1 3 608.31006 1822.91562 -4.01 25.70 2919 2919 MS2 29/64 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 54.77 4.32 1.00 1 2 731.84503 1462.68279 -1.04 23.71 3954 3954 MS2 17/22 Linfeng_081211_IgG_5.raw High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 48.31 4.28 1.00 1 3 629.32849 1885.97092 -1.05 45.97 5440 5440 MS2 22/64 Linfeng_091811_SIN3A_6.raw High ALTVPELTQQVFDAK IPI:IPI00645452.1 4 1 CID 25.35 4.26 1.00 1 3 553.96838 1659.89060 -2.83 41.97 9743 9743 MS2 20/56 Linfeng_081211_IgG_5.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 67.87 4.26 1.00 1 2 651.32098 1301.63469 -1.96 27.45 5277 5277 MS2 18/22 Linfeng_081211_IgG_6.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 37.05 4.14 1.00 1 2 731.84570 1462.68413 -0.12 23.59 4168 4168 MS2 15/22 Linfeng_081211_IgG_10.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 19.56 4.07 1.00 1 2 580.31702 1159.62676 -2.19 33.68 7245 7245 MS2 14/18 Linfeng_081211_IgG_5.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 80.21 3.89 1.00 1 2 651.32062 1301.63396 -2.52 27.67 5110 5110 MS2 16/22 Linfeng_081211_IgG_5.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 21.87 3.81 1.00 1 2 580.31836 1159.62944 0.13 34.04 7496 7496 MS2 15/18 Linfeng_081211_IgG_6.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 25.63 3.75 1.00 1 2 580.31824 1159.62920 -0.08 33.77 7387 7387 MS2 12/18 Linfeng_081211_IgG_7.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 57.93 3.51 1.00 1 2 731.84473 1462.68218 -1.46 23.42 4158 4158 MS2 14/22 Linfeng_081211_IgG_6.raw IPI:IPI00965952.1 221 23.1 5.11 Putative uncharacterized protein HNRNPD 24.89 16 4 79.27 24.89 9 4 46.87 20.36 4 3 35.99 6.33 3 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EYFGGFGEVESIELPmDNK 8 0 CID M16(Oxidation) 147.24 6.27 1.00 1 2 1088.98914 2176.97099 -1.58 41.98 4965 4965 MS2 21/36 Linfeng_091611_rIgG_6.raw High EYFGGFGEVESIELPmDNK 8 0 CID M16(Oxidation) 57.59 6.05 1.00 1 3 726.32904 2176.97257 -0.86 41.96 4962 4962 MS2 26/72 Linfeng_091611_rIgG_6.raw High EYFGGFGEVESIELPmDNK IPI:IPI00965952.1 8 1 CID M16(Oxidation) 66.30 4.90 1.00 1 2 1088.98987 2176.97246 -0.91 41.88 9716 9716 MS2 15/36 Linfeng_081211_IgG_5.raw High IFVGGLSPDTPEEK 9 0 CID 70.05 4.68 1.00 1 2 744.88055 1488.75383 -2.89 32.44 3725 3725 MS2 20/26 Linfeng_091611_rIgG_6.raw High IFVGGLSPDTPEEK IPI:IPI00965952.1 9 1 CID 74.58 4.61 1.00 1 2 744.88214 1488.75701 -0.76 32.96 7097 7097 MS2 18/26 Linfeng_081211_IgG_7.raw High IFVGGLSPDTPEEK 9 0 CID 90.60 4.60 1.00 1 2 744.87982 1488.75237 -3.87 32.45 3842 3842 MS2 20/26 Linfeng_091811_SIN3A_5.raw High IFVGGLSPDTPEEK 9 0 CID 88.79 4.59 1.00 1 2 744.88086 1488.75444 -2.48 32.49 3721 3721 MS2 20/26 Linfeng_091811_SIN3A_6.raw High IFVGGLSPDTPEEK 9 0 CID 65.52 4.58 1.00 1 2 744.88025 1488.75322 -3.30 32.59 3512 3512 MS2 20/26 Linfeng_091811_SIN3A_7.raw High IFVGGLSPDTPEEK IPI:IPI00965952.1 9 1 CID 37.71 4.45 1.00 1 2 744.88129 1488.75530 -1.90 33.77 7678 7678 MS2 18/26 Linfeng_081211_IgG_3.raw High IFVGGLSPDTPEEK IPI:IPI00965952.1 9 1 CID 63.40 4.45 1.00 1 2 744.88141 1488.75554 -1.74 32.77 7055 7055 MS2 18/26 Linfeng_081211_IgG_6.raw High IFVGGLSPDTPEEK IPI:IPI00965952.1 9 1 CID 75.07 4.31 1.00 1 2 744.88202 1488.75676 -0.92 32.84 6936 6936 MS2 19/26 Linfeng_081211_IgG_5.raw High mFIGGLSWDTTK 11 0 CID M1(Oxidation) 76.28 4.27 1.00 1 2 686.33105 1371.65483 -4.78 37.41 4371 4371 MS2 20/22 Linfeng_091611_rIgG_6.raw High FGEVVDcTLK IPI:IPI00965952.1 11 1 CID C7(Carbamidomethyl) 28.15 3.74 1.00 1 2 584.28827 1167.56926 -1.91 30.06 6072 6072 MS2 16/18 Linfeng_081211_IgG_7.raw High mFIGGLSWDTTK IPI:IPI00965952.1 11 1 CID M1(Oxidation) 55.25 3.68 1.00 1 2 686.33392 1371.66057 -0.60 37.69 8512 8512 MS2 16/22 Linfeng_081211_IgG_5.raw High FGEVVDcTLK IPI:IPI00965952.1 11 1 CID C7(Carbamidomethyl) 51.17 3.57 1.00 1 2 584.28912 1167.57097 -0.45 30.60 6318 6318 MS2 16/18 Linfeng_081211_IgG_6.raw High FGEVVDcTLK IPI:IPI00965952.1 11 1 CID C7(Carbamidomethyl) 16.32 3.52 1.00 1 2 584.28870 1167.57012 -1.18 29.66 6137 6137 MS2 13/18 Linfeng_081211_IgG_8.raw IPI:IPI00003362.2 655 72.4 5.16 HSPA5 protein 15.88 17 8 104.27 14.05 10 7 42.14 4.73 2 2 104.99 8.40 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 80.11 6.06 1.00 1 3 553.96759 1659.88822 -4.26 37.76 4413 4413 MS2 38/60 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00939595.1 14 1 CID 91.33 5.73 1.00 1 3 553.96729 1659.88730 -4.81 37.39 4426 4426 MS2 33/60 Linfeng_091611_rIgG_4.raw High NQLTSNPENTVFDAK 1 0 CID 89.68 5.51 1.00 1 2 839.40521 1677.80315 -2.84 30.39 3512 3512 MS2 19/28 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 94.95 5.04 1.00 1 2 830.45294 1659.89861 2.00 37.43 8442 8442 MS2 21/30 Linfeng_081211_IgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 110.08 4.99 1.00 1 2 830.44733 1659.88738 -4.77 37.78 4416 4416 MS2 25/30 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 68.16 4.89 1.00 1 3 553.97003 1659.89554 0.15 37.46 8453 8453 MS2 34/60 Linfeng_081211_IgG_4.raw High NQLTSNPENTVFDAK IPI:IPI00003362.2 1 1 CID 60.02 4.81 1.00 1 2 839.40680 1677.80632 -0.95 31.86 6954 6954 MS2 17/28 Linfeng_081211_IgG_3.raw High NQLTSNPENTVFDAK IPI:IPI00003362.2 1 1 CID 98.64 4.69 1.00 1 2 839.40479 1677.80229 -3.35 30.74 3505 3505 MS2 22/28 Linfeng_091811_SIN3A_4.raw High AKFEELNmDLFR IPI:IPI00003362.2 1 1 CID M8(Oxidation) 52.91 4.60 1.00 1 3 510.25211 1528.74176 -3.12 34.58 4003 4003 MS2 23/44 Linfeng_091811_SIN3A_4.raw High ELEEIVQPIISK IPI:IPI00003362.2 1 1 CID 42.39 4.58 1.00 1 2 699.39880 1397.79033 1.17 36.92 8263 8263 MS2 14/22 Linfeng_081211_IgG_4.raw High ELEEIVQPIISK IPI:IPI00003362.2 1 1 CID 38.67 4.18 1.00 1 2 699.39575 1397.78423 -3.19 36.82 4292 4292 MS2 17/22 Linfeng_091811_SIN3A_4.raw High SDIDEIVLVGGSTR IPI:IPI00003362.2 1 1 CID 42.38 3.90 1.00 1 2 730.88361 1460.75994 0.51 36.94 8274 8274 MS2 17/26 Linfeng_081211_IgG_4.raw High TWNDPSVQQDIK IPI:IPI00003362.2 1 1 CID 35.47 3.87 1.00 1 2 715.84784 1430.68840 -1.88 29.88 6226 6226 MS2 16/22 Linfeng_081211_IgG_3.raw High DAGTIAGLNVmR IPI:IPI00003362.2 1 1 CID M11(Oxidation) 14.17 3.73 1.00 1 2 617.31604 1233.62480 -0.71 31.37 6770 6770 MS2 13/22 Linfeng_081211_IgG_3.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 41.21 3.57 1.00 2 2 614.81689 1228.62651 -1.29 24.79 4573 4573 MS2 15/20 Linfeng_081211_IgG_3.raw High TWNDPSVQQDIK IPI:IPI00003362.2 1 1 CID 32.73 3.55 1.00 1 2 715.84894 1430.69060 -0.34 28.95 5697 5697 MS2 15/22 Linfeng_081211_IgG_4.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 15.51 3.47 1.00 2 2 614.81671 1228.62615 -1.59 24.22 4232 4232 MS2 13/20 Linfeng_081211_IgG_7.raw IPI:IPI00003935.6 126 13.9 10.32 Histone H2B type 2-E 21.43 77 3 355.19 19.84 10 2 269.29 21.43 32 2 327.36 21.43 35 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 93.41 6.52 1.00 1 3 581.94330 1743.81534 -2.32 49.16 5634 5634 MS2 29/56 Linfeng_091811_SIN3A_10.raw High AMGIMNSFVNDIFER 18 0 CID 113.12 6.51 1.00 1 3 581.94385 1743.81699 -1.38 48.93 5428 5428 MS2 33/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 85.67 6.44 1.00 1 3 592.60614 1775.80387 -3.02 41.81 4819 4819 MS2 28/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 88.88 6.42 1.00 1 3 587.27527 1759.81125 -1.74 47.04 5471 5471 MS2 32/56 Linfeng_091811_SIN3A_9.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 93.17 6.41 1.00 1 3 581.94403 1743.81754 -1.06 49.21 5723 5723 MS2 30/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 89.51 6.34 1.00 1 3 587.27502 1759.81052 -2.15 46.77 5350 5350 MS2 31/56 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 74.06 6.26 1.00 1 3 587.27502 1759.81052 -2.15 46.53 5129 5129 MS2 31/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 82.77 6.14 1.00 1 3 592.60663 1775.80533 -2.19 41.40 4487 4487 MS2 28/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 92.13 6.00 1.00 1 2 880.41077 1759.81426 -0.03 47.55 5256 5256 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 53.02 5.99 1.00 1 3 592.60645 1775.80478 -2.50 44.83 5197 5197 MS2 28/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 101.25 5.98 1.00 1 2 880.41089 1759.81450 0.11 46.50 5363 5363 MS2 24/28 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 52.17 5.96 1.00 1 3 592.60693 1775.80625 -1.67 45.49 4999 4999 MS2 26/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 83.95 5.94 1.00 1 3 592.60651 1775.80497 -2.40 41.51 4734 4734 MS2 29/56 Linfeng_091611_rIgG_9.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 95.70 5.92 1.00 1 2 872.41266 1743.81804 -0.77 49.13 5631 5631 MS2 21/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 99.52 5.92 1.00 1 2 880.40948 1759.81169 -1.48 46.84 5548 5548 MS2 22/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 43.94 5.87 1.00 1 3 592.60681 1775.80588 -1.88 44.44 4868 4868 MS2 27/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 97.14 5.84 1.00 1 2 880.40924 1759.81120 -1.76 47.07 5360 5360 MS2 23/28 Linfeng_091811_SIN3A_7.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 97.67 5.82 1.00 1 3 587.27490 1759.81015 -2.36 43.66 4772 4772 MS2 31/56 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 90.07 5.82 1.00 1 2 872.41290 1743.81853 -0.49 49.19 5720 5720 MS2 23/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 100.78 5.82 1.00 1 2 880.40973 1759.81218 -1.21 47.80 5560 5560 MS2 23/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 93.01 5.81 1.00 1 2 880.40985 1759.81243 -1.07 46.76 5348 5348 MS2 24/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 101.25 5.81 1.00 1 2 880.41016 1759.81304 -0.72 46.83 5445 5445 MS2 24/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 98.16 5.81 1.00 1 2 880.40942 1759.81157 -1.55 46.52 5128 5128 MS2 23/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 47.81 5.80 1.00 1 3 587.27594 1759.81327 -0.59 46.47 5360 5360 MS2 26/56 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 46.17 5.76 1.00 1 3 592.60663 1775.80533 -2.19 46.45 5119 5119 MS2 29/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 74.50 5.76 1.00 1 3 592.60620 1775.80405 -2.91 41.74 4715 4715 MS2 29/56 Linfeng_091811_SIN3A_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 98.88 5.74 1.00 1 2 880.40820 1759.80913 -2.94 43.90 4989 4989 MS2 22/28 Linfeng_091811_SIN3A_10.raw High AMGIMNSFVNDIFER 18 0 CID 107.36 5.55 1.00 1 2 872.41333 1743.81938 0.00 48.84 5416 5416 MS2 22/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 98.94 5.55 1.00 1 2 880.40826 1759.80925 -2.87 43.71 5013 5013 MS2 19/28 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 81.85 5.50 1.00 1 2 888.40607 1775.80486 -2.46 41.73 4714 4714 MS2 21/28 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 53.94 5.49 1.00 1 3 592.60663 1775.80533 -2.19 46.91 5455 5455 MS2 26/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 88.29 5.48 1.00 1 2 880.41034 1759.81340 -0.51 46.67 5555 5555 MS2 22/28 Linfeng_091611_rIgG_6.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 101.11 5.48 1.00 1 2 880.40967 1759.81206 -1.28 48.69 5398 5398 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 101.79 5.48 1.00 1 2 880.40863 1759.80998 -2.46 43.64 4769 4769 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 32.23 5.48 1.00 1 3 592.60748 1775.80790 -0.75 47.51 5251 5251 MS2 25/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 43.84 5.47 1.00 1 3 592.60529 1775.80130 -4.46 43.45 4932 4932 MS2 28/56 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 102.96 5.46 1.00 1 2 880.41077 1759.81426 -0.03 46.48 5407 5407 MS2 22/28 Linfeng_091611_rIgG_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 84.24 5.45 1.00 1 2 888.40784 1775.80840 -0.46 45.12 4953 4953 MS2 20/28 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 95.20 5.45 1.00 1 2 880.40955 1759.81182 -1.42 47.82 5470 5470 MS2 19/28 Linfeng_091811_SIN3A_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 99.36 5.41 1.00 1 2 880.40863 1759.80998 -2.46 44.00 5095 5095 MS2 22/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 106.08 5.39 1.00 1 2 880.41040 1759.81352 -0.44 52.20 5830 5830 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 97.17 5.34 1.00 1 2 888.40656 1775.80583 -1.91 41.36 4482 4482 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 101.22 5.31 1.00 1 2 872.41254 1743.81780 -0.91 49.16 5837 5837 MS2 18/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 54.03 5.29 1.00 1 3 592.60602 1775.80350 -3.22 43.53 5036 5036 MS2 27/56 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 84.55 5.28 1.00 1 2 888.40576 1775.80425 -2.80 41.80 4818 4818 MS2 21/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 83.46 5.28 1.00 1 2 888.40601 1775.80474 -2.53 41.76 4905 4905 MS2 21/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 75.49 5.27 1.00 1 2 888.40411 1775.80095 -4.66 46.09 5074 5074 MS2 21/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 75.65 5.27 1.00 1 2 888.40643 1775.80559 -2.05 43.77 4785 4785 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER 18 0 CID 104.39 5.26 1.00 1 2 872.41266 1743.81804 -0.77 48.93 5646 5646 MS2 23/28 Linfeng_091611_rIgG_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 66.48 5.24 1.00 1 2 880.41217 1759.81706 1.57 49.77 5531 5531 MS2 16/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 89.85 5.22 1.00 1 3 587.27454 1759.80906 -2.98 43.91 4991 4991 MS2 33/56 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 89.72 5.20 1.00 1 2 888.40637 1775.80547 -2.11 41.42 4722 4722 MS2 21/28 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 87.89 5.17 1.00 1 2 888.40564 1775.80400 -2.94 43.47 5029 5029 MS2 20/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 37.62 5.17 1.00 1 3 592.60638 1775.80460 -2.60 45.86 5324 5324 MS2 25/56 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 39.85 5.14 1.00 1 3 592.60889 1775.81211 1.62 41.38 9866 9866 MS2 25/56 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 75.27 5.11 1.00 1 2 888.40802 1775.80876 -0.26 46.05 5348 5348 MS2 21/28 Linfeng_091811_SIN3A_9.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 74.36 5.11 1.00 1 3 587.27454 1759.80906 -2.98 43.96 5090 5090 MS2 32/56 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 83.99 5.02 1.00 1 2 888.40668 1775.80608 -1.77 44.89 5205 5205 MS2 19/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 73.01 5.00 1.00 1 2 888.40729 1775.80730 -1.08 52.60 5877 5877 MS2 17/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 62.21 5.00 1.00 1 2 888.40674 1775.80620 -1.70 41.66 10042 10042 MS2 18/28 Linfeng_081211_IgG_8.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 42.65 4.90 1.00 1 3 592.60657 1775.80515 -2.29 43.18 4712 4712 MS2 28/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 40.77 4.88 1.00 1 3 587.27515 1759.81089 -1.94 47.78 5465 5465 MS2 26/56 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 41.47 4.86 1.00 1 3 592.60767 1775.80844 -0.44 41.66 10044 10044 MS2 20/56 Linfeng_081211_IgG_8.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 34.76 4.85 1.00 1 3 587.27606 1759.81363 -0.38 47.56 5257 5257 MS2 26/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 76.82 4.83 1.00 1 2 888.41107 1775.81487 3.18 41.80 10089 10089 MS2 17/28 Linfeng_081211_IgG_7.raw High SRKESYSIYVYK 6 0 CID 28.13 4.79 1.00 1 3 508.26813 1522.78983 -0.14 24.37 2293 2293 MS2 20/44 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 43.74 4.78 1.00 1 3 592.60645 1775.80478 -2.50 44.98 5125 5125 MS2 25/56 Linfeng_091811_SIN3A_10.raw High SRKESYSIYVYK IPI:IPI00003935.6 6 1 CID 44.03 4.78 1.00 1 3 508.26630 1522.78434 -3.75 24.59 2565 2565 MS2 20/44 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 87.55 4.77 1.00 1 2 888.40979 1775.81230 1.74 41.31 9840 9840 MS2 21/28 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 51.64 4.75 1.00 1 2 888.40698 1775.80669 -1.43 41.60 10023 10023 MS2 12/28 Linfeng_081211_IgG_8.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 81.44 4.63 1.00 1 2 888.40698 1775.80669 -1.43 41.24 9816 9816 MS2 18/28 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 72.11 4.62 1.00 1 2 888.40802 1775.80876 -0.26 45.98 5250 5250 MS2 16/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 43.01 4.56 1.00 1 2 880.40790 1759.80852 -3.29 50.82 5661 5661 MS2 12/28 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 18.23 4.42 1.00 1 3 587.27625 1759.81418 -0.07 52.59 6109 6109 MS2 19/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID M2(Oxidation) 20.86 4.41 1.00 1 3 587.27728 1759.81729 1.70 46.55 11312 11312 MS2 24/56 Linfeng_081211_IgG_10.raw High KESYSIYVYK IPI:IPI00152785.3 7 1 CID 50.75 3.73 1.00 1 2 640.33087 1279.65447 -1.89 27.75 5371 5371 MS2 15/18 Linfeng_081211_IgG_10.raw High KESYSIYVYK IPI:IPI00152785.3 7 1 CID 59.21 3.57 1.00 1 2 640.33356 1279.65984 2.30 37.94 6495 6495 MS2 16/18 Linfeng_081211_IgG_9.raw IPI:IPI00024279.4 2144 242.2 6.54 HEAT repeat-containing protein 1 12.87 35 19 168.48 4.80 10 8 249.10 7.42 18 10 132.14 4.62 7 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NTSELVSSEVYLLSALAALQK IPI:IPI00641437.1 2 1 CID 60.34 6.90 1.00 1 3 746.07501 2236.21048 1.47 54.72 6461 6461 MS2 34/80 Linfeng_091811_SIN3A_1.raw High NTSELVSSEVYLLSALAALQK IPI:IPI00641437.1 2 1 CID 98.35 6.64 1.00 1 3 746.07477 2236.20975 1.14 54.65 6406 6406 MS2 34/80 Linfeng_091611_rIgG_1.raw High LLETVLGYISAVAQSMER IPI:IPI00641437.1 2 1 CID 76.18 6.54 1.00 1 3 660.68811 1980.04978 1.34 55.20 6478 6478 MS2 34/68 Linfeng_091611_rIgG_1.raw High NTSELVSSEVYLLSALAALQK IPI:IPI00641437.1 2 1 CID 57.90 6.06 1.00 1 3 746.07715 2236.21689 4.34 54.65 6319 6319 MS2 36/80 Linfeng_091611_rIgG_2.raw High EELTSHQSQLTAFFLEALDFR IPI:IPI00641437.1 2 1 CID 44.20 5.75 1.00 1 3 828.07898 2482.22239 -1.05 51.85 6069 6069 MS2 25/80 Linfeng_091611_rIgG_1.raw High GIPVELWAHYVEELNSTQR IPI:IPI00641437.1 2 1 CID 44.78 5.38 1.00 1 3 747.71423 2241.12815 -0.80 46.61 5422 5422 MS2 27/72 Linfeng_091611_rIgG_1.raw High LLETVLGYISAVAQSmER IPI:IPI00641437.1 2 1 CID M16(Oxidation) 68.41 5.08 1.00 1 3 666.01862 1996.04129 -0.38 53.29 6190 6190 MS2 29/68 Linfeng_091611_rIgG_2.raw High DLGFMDFIcSLVTK IPI:IPI00641437.1 2 1 CID C9(Carbamidomethyl) 78.98 4.99 1.00 1 2 823.40314 1645.79900 1.51 55.32 6494 6494 MS2 20/26 Linfeng_091611_rIgG_1.raw High FAALITVLALAEK IPI:IPI00641437.1 2 1 CID 68.83 4.88 1.00 1 2 680.41461 1359.82195 -2.02 50.26 5841 5841 MS2 21/24 Linfeng_091611_rIgG_2.raw High ITSEMGSASQANIR IPI:IPI00641437.1 2 1 CID 87.84 4.82 1.00 1 2 732.85681 1464.70635 -3.31 23.51 2391 2391 MS2 20/26 Linfeng_091611_rIgG_1.raw High FAALITVLALAEK IPI:IPI00641437.1 2 1 CID 102.35 4.82 1.00 1 2 680.41486 1359.82244 -1.66 50.03 5840 5840 MS2 21/24 Linfeng_091611_rIgG_1.raw High FAALITVLALAEK IPI:IPI00641437.1 2 1 CID 93.89 4.82 1.00 1 2 680.41504 1359.82280 -1.39 50.46 6001 6001 MS2 21/24 Linfeng_091811_SIN3A_1.raw High ITSEmGSASQANIR IPI:IPI00641437.1 2 1 CID M5(Oxidation) 93.58 4.80 1.00 1 2 740.85529 1480.70329 -1.90 19.26 1802 1802 MS2 20/26 Linfeng_091611_rIgG_1.raw High LDDTYSFQVINK IPI:IPI00024279.4 2 1 CID 55.51 4.75 1.00 1 2 721.86127 1442.71526 -0.67 41.16 6554 6554 MS2 18/22 Linfeng_081211_IgG_1.raw High EELTSHQSQLTAFFLEALDFR IPI:IPI00641437.1 2 1 CID 54.50 4.70 1.00 1 3 828.07825 2482.22019 -1.93 51.93 6049 6049 MS2 19/80 Linfeng_091611_rIgG_2.raw High YNEFSVSLLNEDPK IPI:IPI00024279.4 1 1 CID 50.21 4.69 1.00 1 2 827.90167 1654.79607 0.07 45.32 7778 7778 MS2 16/26 Linfeng_081211_IgG_1.raw High DLGFmDFIcSLVTK IPI:IPI00641437.1 2 1 CID "M5(Oxidation), C9(Carbamidomethyl)" 99.19 4.68 1.00 1 2 831.40021 1661.79314 1.03 53.61 6285 6285 MS2 21/26 Linfeng_091611_rIgG_1.raw High NLLScVYScPSYIAK IPI:IPI00024279.4 2 1 CID "C5(Carbamidomethyl), C9(Carbamidomethyl)" 48.40 4.66 1.00 1 2 887.92853 1774.84978 -0.29 46.14 8026 8026 MS2 16/28 Linfeng_081211_IgG_1.raw High SPQILVPTLFNLLSR IPI:IPI00641437.1 2 1 CID 81.94 4.64 1.00 1 2 849.50073 1697.99419 -0.44 52.46 6145 6145 MS2 16/28 Linfeng_091611_rIgG_1.raw High LLETVLGYISAVAQSmER IPI:IPI00641437.1 2 1 CID M16(Oxidation) 42.44 4.58 1.00 1 3 666.01868 1996.04148 -0.29 53.23 6239 6239 MS2 23/68 Linfeng_091611_rIgG_1.raw High VSLLNEQFLPLIR IPI:IPI00641437.1 2 1 CID 73.50 4.58 1.00 1 2 771.45532 1541.90337 -1.10 46.75 5536 5536 MS2 18/24 Linfeng_091811_SIN3A_1.raw High SQDLESVQEVGGSYWQR IPI:IPI00024279.4 2 1 CID 65.08 4.55 1.00 1 2 984.45807 1967.90886 -0.29 40.77 6448 6448 MS2 14/32 Linfeng_081211_IgG_1.raw High TDEAFFDSENDPEK IPI:IPI00641437.1 2 1 CID 80.84 4.41 1.00 1 2 822.33746 1643.66765 -1.94 30.55 3440 3440 MS2 18/26 Linfeng_091811_SIN3A_1.raw High GWEEALENVIK IPI:IPI00641437.1 2 1 CID 42.26 4.41 1.00 1 2 644.33014 1287.65300 -3.89 44.23 5118 5118 MS2 17/20 Linfeng_091611_rIgG_1.raw High ITSEmGSASQANIR IPI:IPI00641437.1 2 1 CID M5(Oxidation) 87.30 4.39 1.00 1 2 740.85510 1480.70293 -2.15 19.25 1884 1884 MS2 21/26 Linfeng_091811_SIN3A_1.raw High GWEEALENVIK IPI:IPI00641437.1 2 1 CID 43.72 4.27 1.00 1 2 644.33124 1287.65520 -2.18 44.61 5266 5266 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LDDTYSFQVINK IPI:IPI00024279.4 2 1 CID 61.59 4.26 1.00 1 2 721.86310 1442.71892 1.86 35.56 7340 7340 MS2 16/22 Linfeng_081211_IgG_2.raw High VSLLNEQFLPLIR IPI:IPI00641437.1 2 1 CID 94.23 4.16 1.00 1 2 771.45551 1541.90373 -0.86 46.54 5377 5377 MS2 17/24 Linfeng_091611_rIgG_2.raw High VFAEYPGSSAQLR IPI:IPI00641437.1 2 1 CID 69.48 4.11 1.00 1 2 712.85974 1424.71221 -3.30 30.04 3372 3372 MS2 17/24 Linfeng_091811_SIN3A_1.raw High VSLLNEQFLPLIR IPI:IPI00641437.1 2 1 CID 79.75 4.11 1.00 1 2 771.45465 1541.90203 -1.97 46.41 5398 5398 MS2 18/24 Linfeng_091611_rIgG_1.raw High GLVGNPLPSVR IPI:IPI00024279.4 2 1 CID 19.86 3.84 1.00 1 2 554.82727 1108.64726 -0.11 33.44 7557 7557 MS2 16/20 Linfeng_081211_IgG_3.raw High EGEEEQAINR IPI:IPI00024279.4 2 1 CID 32.16 3.76 1.00 1 2 587.77069 1174.53411 0.49 20.38 2847 2847 MS2 13/18 Linfeng_081211_IgG_2.raw High EGEEEQAINR IPI:IPI00024279.4 2 1 CID 37.75 3.75 1.00 1 2 587.77094 1174.53459 0.90 19.76 2008 2008 MS2 13/18 Linfeng_081211_IgG_1.raw High VFAEYPGSSAQLR IPI:IPI00024279.4 2 1 CID 33.24 3.74 1.00 1 2 712.86249 1424.71770 0.55 31.44 6798 6798 MS2 16/24 Linfeng_081211_IgG_3.raw High DEVASLLFDPK IPI:IPI00024279.4 3 1 CID 21.82 3.52 1.00 1 2 617.32312 1233.63896 2.23 47.09 8298 8298 MS2 14/20 Linfeng_081211_IgG_1.raw IPI:IPI00297211.1 1052 121.8 8.09 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 9.70 15 8 253.21 7.22 10 6 107.34 2.47 2 2 141.08 3.80 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TEQEEDEELLTESSK IPI:IPI00297211.1 1 1 CID 88.94 5.52 1.00 1 2 883.89484 1766.78240 0.51 29.93 5715 5715 MS2 20/28 Linfeng_081211_IgG_2.raw High TPEEVIEYSAVFWER IPI:IPI00297211.1 1 1 CID 40.95 5.49 1.00 1 3 618.96729 1854.88730 -1.96 46.71 4997 4997 MS2 27/56 Linfeng_091611_rIgG_3.raw High IDEAESLNDEELEEK IPI:IPI00297211.1 1 1 CID 109.25 5.38 1.00 1 2 881.89539 1762.78349 -1.76 30.18 5795 5795 MS2 24/28 Linfeng_081211_IgG_2.raw High TEQEEDEELLTESSK IPI:IPI00297211.1 1 1 CID 101.44 5.29 1.00 1 2 883.89221 1766.77715 -2.46 29.80 6196 6196 MS2 22/28 Linfeng_081211_IgG_3.raw High ESEITDEDIDGILER IPI:IPI00297211.1 1 1 CID 76.22 5.13 1.00 1 2 867.40399 1733.80071 -4.02 38.23 4419 4419 MS2 23/28 Linfeng_091811_SIN3A_2.raw High ESEITDEDIDGILER IPI:IPI00297211.1 1 1 CID 62.33 5.03 1.00 1 2 867.40851 1733.80974 1.19 35.42 7294 7294 MS2 21/28 Linfeng_081211_IgG_2.raw High TPEEVIEYSAVFWER IPI:IPI00297211.1 1 1 CID 34.05 5.01 1.00 1 3 618.96771 1854.88858 -1.27 47.01 5541 5541 MS2 24/56 Linfeng_091811_SIN3A_2.raw High KANYAVDAYFR IPI:IPI00297211.1 4 1 CID 25.35 4.83 1.00 1 3 439.88959 1317.65421 -3.37 29.40 2801 2801 MS2 23/40 Linfeng_091611_rIgG_3.raw High LDSIVIQQGR IPI:IPI00297211.1 4 1 CID 62.55 4.26 1.00 1 2 564.82019 1128.63310 -3.63 28.03 3061 3061 MS2 17/18 Linfeng_091811_SIN3A_2.raw High LDSIVIQQGR IPI:IPI00297211.1 4 1 CID 40.57 4.25 1.00 1 2 564.82117 1128.63506 -1.90 29.41 6047 6047 MS2 15/18 Linfeng_081211_IgG_3.raw High ESEITDEDIDGILER IPI:IPI00297211.1 1 1 CID 62.17 4.22 1.00 1 2 867.40680 1733.80632 -0.78 35.10 8183 8183 MS2 15/28 Linfeng_081211_IgG_3.raw High ESEITDEDIDGILER IPI:IPI00297211.1 1 1 CID 80.48 4.21 1.00 1 2 867.40820 1733.80913 0.84 38.89 8311 8311 MS2 18/28 Linfeng_081211_IgG_2.raw High ESEITDEDIDGILER IPI:IPI00297211.1 1 1 CID 61.03 3.89 1.00 1 2 867.41058 1733.81389 3.59 38.20 8700 8700 MS2 15/28 Linfeng_081211_IgG_4.raw High LLTQGFTNWNK IPI:IPI00297211.1 1 1 CID 38.53 3.78 1.00 1 2 661.34766 1321.68804 -1.46 35.30 7823 7823 MS2 13/20 Linfeng_081211_IgG_5.raw High FITDNTVEER IPI:IPI00297211.1 1 1 CID 56.05 3.66 1.00 1 2 612.29718 1223.58708 -2.64 27.49 5472 5472 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00298788.4 894 95.3 8.76 Isoform 1 of Interleukin enhancer-binding factor 3 15.77 19 8 181.60 8.50 10 6 92.80 7.05 4 3 133.71 7.38 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK IPI:IPI00298788.4 2 1 CID 80.39 6.81 1.00 1 3 1085.10291 3253.29416 -1.87 25.54 2295 2295 MS2 35/120 Linfeng_091611_rIgG_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00298788.4 7 1 CID 92.63 6.42 1.00 1 2 955.49377 1909.98027 -3.34 36.32 4210 4210 MS2 20/34 Linfeng_091811_SIN3A_3.raw High SGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGK IPI:IPI00298788.4 2 1 CID 143.42 6.24 1.00 1 3 1004.74408 3012.21769 -6.62 22.57 2346 2346 MS2 33/132 Linfeng_091811_SIN3A_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00298788.4 7 1 CID 86.99 6.09 1.00 1 2 955.49396 1909.98064 -3.15 36.27 3669 3669 MS2 20/34 Linfeng_091611_rIgG_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00219330.2 7 1 CID 67.70 5.90 1.00 1 2 955.49774 1909.98821 0.81 37.10 8881 8881 MS2 19/34 Linfeng_081211_IgG_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00219330.2 7 1 CID 48.99 5.76 1.00 1 3 637.33319 1909.98502 -0.85 37.25 8922 8922 MS2 28/68 Linfeng_081211_IgG_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00298788.4 7 1 CID 67.88 5.57 1.00 1 3 637.33185 1909.98099 -2.96 36.16 3655 3655 MS2 30/68 Linfeng_091611_rIgG_3.raw High VLAGETLSVNDPPDVLDR IPI:IPI00298788.4 7 1 CID 76.46 5.18 1.00 1 3 637.33154 1909.98008 -3.44 36.32 4209 4209 MS2 33/68 Linfeng_091811_SIN3A_3.raw High VLQDMGLPTGAEGR IPI:IPI00219330.2 6 1 CID 71.76 4.93 1.00 1 2 722.36554 1443.72380 -1.61 32.85 7336 7336 MS2 18/26 Linfeng_081211_IgG_3.raw High VLQDMGLPTGAEGR IPI:IPI00298788.4 6 1 CID 83.03 4.92 1.00 1 2 722.36456 1443.72185 -2.97 31.62 3594 3594 MS2 22/26 Linfeng_091811_SIN3A_3.raw High VLQDmGLPTGAEGR IPI:IPI00298788.4 6 1 CID M5(Oxidation) 75.76 4.85 1.00 1 2 730.36053 1459.71379 -4.97 26.54 2902 2902 MS2 22/26 Linfeng_091811_SIN3A_3.raw High VLQDmGLPTGAEGR IPI:IPI00298788.4 6 1 CID M5(Oxidation) 98.00 4.57 1.00 1 2 730.36298 1459.71868 -1.62 26.38 2410 2410 MS2 22/26 Linfeng_091611_rIgG_3.raw High VLQDmGLPTGAEGR IPI:IPI00219330.2 6 1 CID M5(Oxidation) 70.77 4.43 1.00 1 2 730.36224 1459.71721 -2.63 27.83 5537 5537 MS2 20/26 Linfeng_081211_IgG_3.raw High AYAALAALEK IPI:IPI00219330.2 6 1 CID 45.32 3.76 1.00 1 2 510.78970 1020.57213 -0.33 34.26 7857 7857 MS2 15/18 Linfeng_081211_IgG_3.raw High EDITQSAQHALR IPI:IPI00219330.2 7 1 CID 64.40 3.73 1.00 1 2 684.84607 1368.68486 -1.32 27.26 5419 5419 MS2 15/22 Linfeng_081211_IgG_3.raw High AYAALAALEK IPI:IPI00219330.2 6 1 CID 44.62 3.55 1.00 1 2 510.78952 1020.57176 -0.69 33.32 7113 7113 MS2 15/18 Linfeng_081211_IgG_5.raw High AYAALAALEK IPI:IPI00219330.2 6 1 CID 34.71 3.51 1.00 1 2 510.78934 1020.57140 -1.05 33.34 7169 7169 MS2 15/18 Linfeng_081211_IgG_4.raw High EATDAIGHLDR IPI:IPI00219330.2 7 1 CID 43.61 3.48 1.00 1 2 599.29523 1197.58318 -2.27 25.41 4790 4790 MS2 16/20 Linfeng_081211_IgG_3.raw High AVSDWIDEQEK IPI:IPI00219330.2 7 1 CID 57.56 3.47 1.00 1 2 660.30865 1319.61003 -1.07 33.30 7499 7499 MS2 16/20 Linfeng_081211_IgG_3.raw IPI:IPI00301323.1 670 75.4 9.50 ATP-dependent RNA helicase DDX18 23.58 17 11 88.53 15.52 10 8 55.84 9.85 4 4 80.67 6.42 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QIFNVNNLNLPQVALSFGFK IPI:IPI00301323.1 1 1 CID 108.15 5.16 1.00 1 3 755.07849 2263.22092 -1.12 52.18 5671 5671 MS2 34/76 Linfeng_091611_rIgG_3.raw High ANATVDGLEQGYVVcPSEK 2 0 CID C15(Carbamidomethyl) 72.29 5.06 1.00 1 2 1018.98102 2036.95476 -2.30 32.35 3691 3691 MS2 19/36 Linfeng_091811_SIN3A_3.raw High GLDIPEVDWIVQYDPPDDPK IPI:IPI00301323.1 3 1 CID 75.71 4.85 1.00 1 3 771.04047 2311.10685 -2.65 47.58 5100 5100 MS2 29/76 Linfeng_091611_rIgG_3.raw High VPPFVDLNVNSNEGK IPI:IPI00301323.1 1 1 CID 42.06 4.65 1.00 1 3 543.61450 1628.82895 0.62 36.70 8734 8734 MS2 23/56 Linfeng_081211_IgG_3.raw High ANATVDGLEQGYVVcPSEK IPI:IPI00301323.1 2 1 CID C15(Carbamidomethyl) 80.76 4.48 1.00 1 2 1018.98346 2036.95964 0.10 33.12 7430 7430 MS2 17/36 Linfeng_081211_IgG_3.raw High VPLSEFDFSWSK 1 0 CID 92.77 4.39 1.00 1 2 721.35223 1441.69719 -1.86 42.10 4954 4954 MS2 19/22 Linfeng_091811_SIN3A_3.raw High LGNGINIIVATPGR IPI:IPI00301323.1 1 1 CID 45.05 4.38 1.00 1 2 697.90796 1394.80864 -2.05 36.20 8563 8563 MS2 16/26 Linfeng_081211_IgG_3.raw High VPLSEFDFSWSK IPI:IPI00301323.1 1 1 CID 93.14 4.32 1.00 1 2 721.35205 1441.69682 -2.11 42.00 4401 4401 MS2 16/22 Linfeng_091611_rIgG_3.raw High NLQcLVIDEADR IPI:IPI00301323.1 2 1 CID C4(Carbamidomethyl) 58.04 4.32 1.00 1 2 723.35547 1445.70366 -1.19 35.73 8412 8412 MS2 19/22 Linfeng_081211_IgG_3.raw High NLQcLVIDEADR 2 0 CID C4(Carbamidomethyl) 103.44 4.30 1.00 1 2 723.35406 1445.70085 -3.13 34.73 3999 3999 MS2 19/22 Linfeng_091811_SIN3A_3.raw High TLAFLIPAVELIVK IPI:IPI00301323.1 1 1 CID 72.33 4.12 1.00 1 2 763.98059 1526.95391 -1.18 54.55 6539 6539 MS2 17/26 Linfeng_091611_rIgG_4.raw High NLQcLVIDEADR IPI:IPI00301323.1 2 1 CID C4(Carbamidomethyl) 50.96 4.05 1.00 1 2 723.35565 1445.70403 -0.93 34.90 7673 7673 MS2 17/22 Linfeng_081211_IgG_5.raw High ISDIQSQLEK IPI:IPI00301323.1 1 1 CID 24.18 3.87 1.00 1 2 580.81030 1160.61333 -2.12 28.18 5647 5647 MS2 16/18 Linfeng_081211_IgG_3.raw High ILDVGFEEELK IPI:IPI00301323.1 2 1 CID 53.60 3.72 1.00 1 2 646.34131 1291.67534 -2.12 38.94 9499 9499 MS2 16/20 Linfeng_081211_IgG_3.raw High ELAmQTFGVLK IPI:IPI00301323.1 1 1 CID M4(Oxidation) 34.17 3.57 1.00 1 2 626.83331 1252.65935 -1.04 34.72 8035 8035 MS2 14/20 Linfeng_081211_IgG_3.raw High VPLSEFDFSWSK IPI:IPI00301323.1 1 1 CID 60.72 3.57 1.00 1 2 721.35461 1441.70195 1.44 42.32 10210 10210 MS2 13/22 Linfeng_081211_IgG_8.raw High ILDVGFEEELK IPI:IPI00301323.1 2 1 CID 55.48 3.46 1.00 1 2 646.34222 1291.67717 -0.70 38.00 8611 8611 MS2 14/20 Linfeng_081211_IgG_5.raw IPI:IPI00304692.1 391 42.3 10.05 Heterogeneous nuclear ribonucleoprotein G 10.23 23 3 182.94 10.23 10 3 102.41 10.23 7 3 128.36 6.91 6 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GFAFVTFESPADAK IPI:IPI00304692.1 6 1 CID 68.29 5.13 1.00 1 2 743.86517 1486.72307 1.16 41.20 9767 9767 MS2 18/26 Linfeng_081211_IgG_6.raw High GFAFVTFESPADAK 6 0 CID 78.70 5.08 1.00 1 2 743.86322 1486.71916 -1.47 40.25 4882 4882 MS2 20/26 Linfeng_091811_SIN3A_5.raw High GFAFVTFESPADAK 6 0 CID 70.90 5.02 1.00 1 2 743.86267 1486.71807 -2.21 40.44 4743 4743 MS2 20/26 Linfeng_091811_SIN3A_6.raw High GFAFVTFESPADAK IPI:IPI00304692.1 6 1 CID 75.93 4.95 1.00 1 2 743.86578 1486.72429 1.98 40.54 9667 9667 MS2 18/26 Linfeng_081211_IgG_7.raw High GFAFVTFESPADAK 6 0 CID 69.59 4.94 1.00 1 2 743.86243 1486.71758 -2.54 40.07 4718 4718 MS2 20/26 Linfeng_091611_rIgG_6.raw High GFAFVTFESPADAK 6 0 CID 81.39 4.86 1.00 1 2 743.86182 1486.71636 -3.36 40.48 4530 4530 MS2 19/26 Linfeng_091811_SIN3A_7.raw High GFAFVTFESPADAK IPI:IPI00304692.1 6 1 CID 68.44 4.84 1.00 1 2 743.86316 1486.71904 -1.55 40.30 9279 9279 MS2 18/26 Linfeng_081211_IgG_5.raw High GFAFVTFESPADAK 6 0 CID 43.31 4.72 1.00 1 2 743.86310 1486.71892 -1.64 40.10 4642 4642 MS2 18/26 Linfeng_091611_rIgG_7.raw High GFAFVTFESPADAK 6 0 CID 75.12 4.55 1.00 1 2 743.86163 1486.71599 -3.61 40.07 4727 4727 MS2 17/26 Linfeng_091611_rIgG_5.raw High LFIGGLNTETNEK 6 0 CID 58.80 4.39 1.00 1 2 718.37256 1435.73784 -3.46 33.55 3986 3986 MS2 19/24 Linfeng_091811_SIN3A_5.raw High LFIGGLNTETNEK 6 0 CID 58.76 4.39 1.00 1 2 718.37311 1435.73894 -2.69 33.64 3869 3869 MS2 19/24 Linfeng_091811_SIN3A_6.raw High VEQATKPSFESGR 4 0 CID 56.29 4.38 1.00 1 2 718.36145 1435.71562 -1.41 19.68 1985 1985 MS2 15/24 Linfeng_091611_rIgG_6.raw High LFIGGLNTETNEK 6 0 CID 54.06 4.36 1.00 1 2 718.37311 1435.73894 -2.69 33.41 3852 3852 MS2 19/24 Linfeng_091611_rIgG_6.raw High LFIGGLNTETNEK 6 0 CID 54.54 4.34 1.00 1 2 718.37286 1435.73845 -3.03 33.42 3869 3869 MS2 19/24 Linfeng_091611_rIgG_5.raw High LFIGGLNTETNEK 6 0 CID 56.31 4.33 1.00 1 2 718.37256 1435.73784 -3.46 33.69 3654 3654 MS2 19/24 Linfeng_091811_SIN3A_7.raw High LFIGGLNTETNEK 6 0 CID 65.74 4.22 1.00 1 2 718.37323 1435.73918 -2.52 33.40 3782 3782 MS2 19/24 Linfeng_091611_rIgG_7.raw High LFIGGLNTETNEK IPI:IPI00304692.1 6 1 CID 25.35 4.20 1.00 1 2 718.37537 1435.74346 0.46 34.07 7498 7498 MS2 18/24 Linfeng_081211_IgG_7.raw High LFIGGLNTETNEK IPI:IPI00304692.1 6 1 CID 49.53 4.08 1.00 1 2 718.37415 1435.74101 -1.24 33.93 7342 7342 MS2 18/24 Linfeng_081211_IgG_5.raw High LFIGGLNTETNEK IPI:IPI00304692.1 6 1 CID 48.63 4.06 1.00 1 2 718.37494 1435.74260 -0.14 33.67 7306 7306 MS2 18/24 Linfeng_081211_IgG_10.raw High GFAFVTFESPADAK IPI:IPI00304692.1 6 1 CID 53.81 4.01 1.00 1 2 743.86566 1486.72405 1.81 40.13 9460 9460 MS2 13/26 Linfeng_081211_IgG_10.raw High VEQATKPSFESGR IPI:IPI00304692.1 4 1 CID 63.24 3.93 1.00 1 2 718.36133 1435.71538 -1.58 20.61 3021 3021 MS2 15/24 Linfeng_081211_IgG_5.raw High LFIGGLNTETNEK IPI:IPI00304692.1 6 1 CID 38.98 3.84 1.00 1 2 718.37439 1435.74150 -0.90 33.72 7581 7581 MS2 15/24 Linfeng_081211_IgG_8.raw High VEQATKPSFESGR IPI:IPI00304692.1 4 1 CID 46.37 3.58 1.00 1 2 718.36377 1435.72026 1.82 20.28 3189 3189 MS2 15/24 Linfeng_081211_IgG_6.raw IPI:IPI00443478.1 431 49.5 6.13 Isoform 3 of Glial fibrillary acidic protein 7.42 112 3 121.96 7.42 10 3 507.07 2.55 59 1 344.69 2.55 43 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LALDIEIATYR 18 0 CID 74.39 4.64 1.00 2 2 639.35675 1277.70622 -2.98 43.24 5095 5095 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 76.51 4.57 1.00 2 2 639.35730 1277.70732 -2.12 40.03 4545 4545 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 79.48 4.54 1.00 2 2 639.35760 1277.70793 -1.64 41.13 4452 4452 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 67.98 4.53 1.00 2 2 639.35693 1277.70659 -2.69 42.13 4953 4953 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 49.93 4.52 1.00 2 2 639.35950 1277.71172 1.32 47.80 5672 5672 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 68.12 4.51 1.00 2 2 639.35614 1277.70500 -3.93 41.03 4901 4901 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 73.22 4.50 1.00 2 2 639.35693 1277.70659 -2.69 40.41 4641 4641 MS2 18/20 Linfeng_091811_SIN3A_9.raw High LALDIEIATYR 18 0 CID 72.43 4.48 1.00 2 2 639.35718 1277.70708 -2.31 40.09 4321 4321 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 70.38 4.48 1.00 2 2 639.35736 1277.70745 -2.02 41.35 4664 4664 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 55.08 4.46 1.00 2 2 639.35828 1277.70928 -0.59 50.87 5918 5918 MS2 15/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.36 4.45 1.00 2 2 639.35791 1277.70854 -1.16 40.26 9340 9340 MS2 18/20 Linfeng_081211_IgG_4.raw High LALDIEIATYR 18 0 CID 77.19 4.45 1.00 2 2 639.35785 1277.70842 -1.26 42.32 4847 4847 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 58.29 4.45 1.00 2 2 639.35858 1277.70989 -0.11 48.83 5662 5662 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 60.43 4.44 1.00 2 2 639.35699 1277.70671 -2.60 41.28 4866 4866 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 61.07 4.44 1.00 2 2 639.35687 1277.70647 -2.79 47.51 5532 5532 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.30 4.44 1.00 2 2 639.35767 1277.70806 -1.55 40.08 4640 4640 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.17 4.44 1.00 2 2 639.35913 1277.71099 0.75 40.34 9594 9594 MS2 17/20 Linfeng_081211_IgG_7.raw High LALDIEIATYR 18 0 CID 72.54 4.43 1.00 2 2 639.35645 1277.70561 -3.46 40.34 4730 4730 MS2 18/20 Linfeng_091811_SIN3A_6.raw High LALDIEIATYR 18 0 CID 71.04 4.42 1.00 2 2 639.35693 1277.70659 -2.69 41.11 4822 4822 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.66 4.42 1.00 2 2 639.35608 1277.70488 -4.03 40.29 4529 4529 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 73.64 4.42 1.00 2 2 639.35596 1277.70464 -4.22 41.11 4715 4715 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 69.41 4.39 1.00 2 2 639.35724 1277.70720 -2.22 40.09 4697 4697 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 51.08 4.39 1.00 2 2 639.35730 1277.70732 -2.12 46.84 5415 5415 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 71.25 4.39 1.00 2 2 639.35730 1277.70732 -2.12 40.26 4734 4734 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 79.65 4.38 1.00 2 2 639.35754 1277.70781 -1.74 41.27 4714 4714 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 59.23 4.38 1.00 2 2 639.35748 1277.70769 -1.83 43.35 4979 4979 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 73.29 4.38 1.00 2 2 639.35663 1277.70598 -3.17 39.89 4132 4132 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 77.06 4.38 1.00 2 2 639.35663 1277.70598 -3.17 40.43 4592 4592 MS2 18/20 Linfeng_091811_SIN3A_8.raw High LALDIEIATYR 18 0 CID 65.38 4.37 1.00 2 2 639.35651 1277.70574 -3.36 40.11 4694 4694 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 74.05 4.37 1.00 2 2 639.35608 1277.70488 -4.03 41.10 4286 4286 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 78.75 4.37 1.00 2 2 639.35675 1277.70622 -2.98 40.12 4662 4662 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.04 4.36 1.00 2 2 639.35779 1277.70830 -1.36 45.45 5463 5463 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 76.07 4.36 1.00 2 2 639.35681 1277.70635 -2.88 39.96 4760 4760 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 75.43 4.36 1.00 2 2 639.35663 1277.70598 -3.17 45.36 5361 5361 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 60.74 4.36 1.00 2 2 639.35657 1277.70586 -3.27 42.75 5002 5002 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 56.40 4.35 1.00 2 2 639.35767 1277.70806 -1.55 49.16 5733 5733 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 67.31 4.35 1.00 2 2 639.35657 1277.70586 -3.27 40.36 4515 4515 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 56.99 4.35 1.00 2 2 639.35773 1277.70818 -1.45 50.07 5785 5785 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 65.43 4.35 1.00 2 2 639.35699 1277.70671 -2.60 43.36 5114 5114 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 58.16 4.35 1.00 2 2 639.35730 1277.70732 -2.12 40.18 4732 4732 MS2 18/20 Linfeng_091611_rIgG_6.raw High LALDIEIATYR 18 0 CID 71.18 4.34 1.00 2 2 639.35651 1277.70574 -3.36 41.19 4801 4801 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 49.21 4.34 1.00 2 2 639.35986 1277.71245 1.89 54.39 6420 6420 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 59.05 4.34 1.00 2 2 639.35736 1277.70745 -2.02 40.08 4863 4863 MS2 18/20 Linfeng_091611_rIgG_8.raw High LALDIEIATYR 18 0 CID 55.20 4.34 1.00 2 2 639.35870 1277.71013 0.08 55.48 6559 6559 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 61.60 4.33 1.00 2 2 639.35638 1277.70549 -3.55 40.02 4574 4574 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.92 4.32 1.00 2 2 639.35590 1277.70452 -4.32 41.56 4668 4668 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 66.07 4.32 1.00 2 2 639.35980 1277.71233 1.80 54.48 5929 5929 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.17 4.31 1.00 2 2 639.35968 1277.71208 1.61 54.36 6260 6260 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 59.60 4.31 1.00 2 2 639.35803 1277.70879 -0.97 41.21 4786 4786 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR 18 0 CID 60.55 4.30 1.00 2 2 639.35754 1277.70781 -1.74 46.40 5492 5492 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 69.47 4.29 1.00 2 2 639.35681 1277.70635 -2.88 40.13 4735 4735 MS2 18/20 Linfeng_091611_rIgG_5.raw High LALDIEIATYR 18 0 CID 59.26 4.28 1.00 2 2 639.35791 1277.70854 -1.16 55.00 6451 6451 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 53.03 4.28 1.00 2 2 639.35669 1277.70610 -3.08 45.08 5331 5331 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 77.31 4.28 1.00 2 2 639.35699 1277.70671 -2.60 41.07 4677 4677 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 48.36 4.27 1.00 2 2 639.35736 1277.70745 -2.02 57.72 6821 6821 MS2 15/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.62 4.27 1.00 2 2 639.35754 1277.70781 -1.74 50.20 5426 5426 MS2 15/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.23 4.26 1.00 2 2 639.35779 1277.70830 -1.36 42.61 4875 4875 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.87 4.25 1.00 2 2 639.35852 1277.70976 -0.21 56.53 6145 6145 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.26 4.25 1.00 2 2 639.35773 1277.70818 -1.45 56.99 6644 6644 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 63.44 4.24 1.00 2 2 639.35791 1277.70854 -1.16 57.20 6548 6548 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 80.54 4.24 1.00 2 2 639.35883 1277.71037 0.27 53.92 6249 6249 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 65.19 4.24 1.00 2 2 639.35760 1277.70793 -1.64 45.30 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 62.40 4.24 1.00 2 2 639.35944 1277.71160 1.22 47.04 5431 5431 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 55.71 4.23 1.00 2 2 639.35876 1277.71025 0.17 53.30 6162 6162 MS2 17/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 52.12 4.23 1.00 2 2 639.35699 1277.70671 -2.60 58.44 7078 7078 MS2 16/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 44.05 4.23 1.00 2 2 639.35828 1277.70928 -0.59 50.81 6046 6046 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 40.37 4.23 1.00 2 2 639.35785 1277.70842 -1.26 46.96 5535 5535 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 31.44 4.22 1.00 2 2 639.35651 1277.70574 -3.36 44.25 5222 5222 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 64.31 4.22 1.00 2 2 639.35675 1277.70622 -2.98 46.01 4908 4908 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 63.92 4.22 1.00 2 2 639.35681 1277.70635 -2.88 42.34 4984 4984 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 73.74 4.22 1.00 2 2 639.35693 1277.70659 -2.69 44.58 4727 4727 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.53 4.21 1.00 2 2 639.35724 1277.70720 -2.22 54.73 6304 6304 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 81.93 4.21 1.00 2 2 639.35645 1277.70561 -3.46 42.51 4466 4466 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 76.91 4.21 1.00 2 2 639.35736 1277.70745 -2.02 40.28 4886 4886 MS2 18/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 74.05 4.21 1.00 2 2 639.35632 1277.70537 -3.65 42.42 4886 4886 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.76 4.20 1.00 2 2 639.35785 1277.70842 -1.26 51.80 6160 6160 MS2 16/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 63.73 4.20 1.00 2 2 639.35846 1277.70964 -0.30 47.82 5536 5536 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 54.51 4.18 1.00 2 2 639.35699 1277.70671 -2.60 41.23 4842 4842 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.60 4.18 1.00 2 2 639.35822 1277.70915 -0.69 45.71 5263 5263 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 72.51 4.17 1.00 2 2 639.35864 1277.71001 -0.02 45.63 5263 5263 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 77.88 4.17 1.00 2 2 639.35797 1277.70867 -1.07 40.14 9229 9229 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 51.47 4.17 1.00 2 2 639.35846 1277.70964 -0.30 51.21 5551 5551 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.44 4.16 1.00 2 2 639.35907 1277.71086 0.65 53.41 5818 5818 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.78 4.16 1.00 2 2 639.35858 1277.70989 -0.11 51.02 6045 6045 MS2 16/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.75 4.16 1.00 2 2 639.35803 1277.70879 -0.97 51.16 5918 5918 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.19 4.15 1.00 2 2 639.35748 1277.70769 -1.83 49.79 5916 5916 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 56.10 4.15 1.00 2 2 639.35889 1277.71050 0.36 50.84 6048 6048 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 70.88 4.15 1.00 2 2 639.35748 1277.70769 -1.83 47.71 5656 5656 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 55.55 4.15 1.00 2 2 639.35938 1277.71147 1.13 51.67 6046 6046 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 64.79 4.14 1.00 2 2 639.35864 1277.71001 -0.02 53.71 6297 6297 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.36 4.14 1.00 2 2 639.35663 1277.70598 -3.17 58.99 6872 6872 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 48.16 4.13 1.00 2 2 639.35895 1277.71062 0.46 53.39 6431 6431 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.88 4.13 1.00 2 2 639.35950 1277.71172 1.32 53.89 6378 6378 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.97 4.12 1.00 2 2 639.35754 1277.70781 -1.74 40.23 4581 4581 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 45.33 4.12 1.00 2 2 639.35718 1277.70708 -2.31 48.76 5787 5787 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 66.71 4.12 1.00 2 2 639.35931 1277.71135 1.03 54.32 6396 6396 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.76 4.12 1.00 2 2 639.35718 1277.70708 -2.31 47.57 5724 5724 MS2 16/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 60.61 4.11 1.00 2 2 639.35712 1277.70696 -2.41 52.88 6281 6281 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 65.97 4.10 1.00 2 2 639.35687 1277.70647 -2.79 42.36 5006 5006 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 51.06 4.10 1.00 2 2 639.35791 1277.70854 -1.16 56.60 6731 6731 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 49.83 4.10 1.00 2 2 639.35999 1277.71269 2.08 54.43 6527 6527 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 80.27 4.09 1.00 2 2 639.35779 1277.70830 -1.36 50.66 5920 5920 MS2 17/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 60.93 4.09 1.00 2 2 639.35925 1277.71123 0.94 55.49 6056 6056 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 47.53 4.08 1.00 2 2 639.36035 1277.71343 2.66 55.17 6383 6383 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 64.57 4.07 1.00 2 2 639.35559 1277.70391 -4.79 45.11 5232 5232 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 52.55 4.06 1.00 2 2 639.35870 1277.71013 0.08 40.31 9658 9658 MS2 14/20 Linfeng_081211_IgG_8.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 34.23 4.01 1.00 2 2 639.35919 1277.71111 0.84 41.29 9835 9835 MS2 15/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 54.99 3.99 1.00 2 2 639.36005 1277.71282 2.18 40.23 9494 9494 MS2 14/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 59.78 3.98 1.00 2 2 639.35870 1277.71013 0.08 41.43 10337 10337 MS2 15/20 Linfeng_081211_IgG_3.raw High LEAENNLAAYR IPI:IPI00443478.1 3 1 CID 43.80 3.77 1.00 1 2 632.31818 1263.62908 -2.98 27.96 5369 5369 MS2 15/20 Linfeng_081211_IgG_4.raw High ALAAELNQLR IPI:IPI00443478.1 4 1 CID 32.78 3.73 1.00 1 2 549.81726 1098.62724 0.55 32.51 6899 6899 MS2 15/18 Linfeng_081211_IgG_4.raw High ALAAELNQLR IPI:IPI00443478.1 4 1 CID 20.41 3.66 1.00 1 2 549.81720 1098.62712 0.44 32.71 7007 7007 MS2 16/18 Linfeng_081211_IgG_7.raw IPI:IPI00745872.2 609 69.3 6.28 Isoform 1 of Serum albumin 15.60 40 7 205.34 7.88 10 4 246.70 10.18 16 4 210.24 9.85 14 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 50.90 5.58 1.00 1 3 489.95108 1467.83869 -3.01 34.42 3837 3837 MS2 29/44 Linfeng_091611_rIgG_2.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 54.65 5.48 1.00 1 3 547.31555 1639.93210 -3.49 30.00 3330 3330 MS2 36/56 Linfeng_091811_SIN3A_2.raw High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 61.22 5.46 1.00 1 3 489.95117 1467.83896 -2.83 34.50 3969 3969 MS2 28/44 Linfeng_091811_SIN3A_3.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 61.65 5.43 1.00 1 3 547.31512 1639.93082 -4.27 29.97 3504 3504 MS2 30/56 Linfeng_091811_SIN3A_5.raw High ALVLIAFAQYLQQcPFEDHVK IPI:IPI00908876.1 6 1 CID C14(Carbamidomethyl) 65.74 5.41 1.00 1 4 623.32587 2490.28164 -1.38 51.12 5539 5539 MS2 34/120 Linfeng_091611_rIgG_3.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 67.70 5.39 1.00 1 3 547.31519 1639.93100 -4.16 29.73 3228 3228 MS2 32/56 Linfeng_091611_rIgG_2.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 58.14 5.32 1.00 1 3 547.31494 1639.93027 -4.60 29.66 3413 3413 MS2 32/56 Linfeng_091611_rIgG_4.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 53.81 5.26 1.00 1 3 547.31561 1639.93229 -3.38 29.85 3358 3358 MS2 28/56 Linfeng_091811_SIN3A_3.raw High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 51.90 5.22 1.00 1 3 489.95087 1467.83805 -3.45 34.61 3943 3943 MS2 29/44 Linfeng_091811_SIN3A_2.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 51.31 5.20 1.00 1 3 547.31592 1639.93320 -2.82 29.80 3372 3372 MS2 29/56 Linfeng_091611_rIgG_6.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 50.07 5.18 1.00 1 3 547.31543 1639.93174 -3.71 29.73 3506 3506 MS2 31/56 Linfeng_091611_rIgG_8.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 41.43 5.17 1.00 1 3 547.31512 1639.93082 -4.27 29.65 3210 3210 MS2 29/56 Linfeng_091611_rIgG_1.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 40.77 5.11 1.00 1 3 547.31683 1639.93595 -1.14 30.86 6411 6411 MS2 23/56 Linfeng_081211_IgG_6.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 42.17 5.11 1.00 1 3 547.31464 1639.92936 -5.16 29.81 3341 3341 MS2 30/56 Linfeng_091811_SIN3A_1.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 53.32 5.09 1.00 1 3 547.31531 1639.93137 -3.93 30.04 3412 3412 MS2 31/56 Linfeng_091811_SIN3A_4.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 51.15 4.98 1.00 1 3 547.31549 1639.93192 -3.60 29.73 3008 3008 MS2 26/56 Linfeng_091611_rIgG_10.raw High HPYFYAPELLFFAK IPI:IPI00908876.1 8 1 CID 57.81 4.97 1.00 1 3 581.63501 1742.89048 -2.10 45.92 5335 5335 MS2 25/52 Linfeng_091611_rIgG_1.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 52.00 4.97 1.00 1 3 547.31580 1639.93283 -3.04 29.63 2830 2830 MS2 30/56 Linfeng_091611_rIgG_3.raw High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 51.95 4.94 1.00 1 3 489.95111 1467.83878 -2.95 34.31 3421 3421 MS2 29/44 Linfeng_091611_rIgG_3.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 34.52 4.90 1.00 1 3 547.31525 1639.93119 -4.05 30.06 3397 3397 MS2 25/56 Linfeng_091811_SIN3A_6.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 45.31 4.89 1.00 1 3 547.31561 1639.93229 -3.38 29.72 3381 3381 MS2 26/56 Linfeng_091611_rIgG_5.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 33.07 4.81 1.00 1 3 547.31586 1639.93302 -2.93 29.79 3311 3311 MS2 25/56 Linfeng_091611_rIgG_7.raw High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 58.84 4.81 1.00 1 3 489.95093 1467.83823 -3.33 34.71 4019 4019 MS2 29/44 Linfeng_091811_SIN3A_4.raw High RHPDYSVVLLLR IPI:IPI00908876.1 9 1 CID 52.50 4.80 1.00 1 3 489.95047 1467.83686 -4.26 34.35 4030 4030 MS2 29/44 Linfeng_091611_rIgG_4.raw High ALVLIAFAQYLQQcPFEDHVK IPI:IPI00908876.1 6 1 CID C14(Carbamidomethyl) 52.35 4.70 1.00 1 3 830.76624 2490.28415 -0.37 51.21 5550 5550 MS2 26/80 Linfeng_091611_rIgG_3.raw High ALVLIAFAQYLQQcPFEDHVK IPI:IPI00908876.1 6 1 CID C14(Carbamidomethyl) 59.23 4.63 1.00 1 3 830.76605 2490.28360 -0.59 51.26 5966 5966 MS2 24/80 Linfeng_091611_rIgG_2.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 33.08 4.57 1.00 1 3 547.31787 1639.93906 0.76 30.45 6204 6204 MS2 26/56 Linfeng_081211_IgG_4.raw High ALVLIAFAQYLQQcPFEDHVK IPI:IPI00908876.1 6 1 CID C14(Carbamidomethyl) 59.99 4.50 1.00 1 4 623.32904 2490.29433 3.72 51.47 6122 6122 MS2 33/120 Linfeng_091811_SIN3A_3.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 38.55 4.48 1.00 1 3 547.31506 1639.93064 -4.38 30.14 3211 3211 MS2 25/56 Linfeng_091811_SIN3A_10.raw High KVPQVSTPTLVEVSR IPI:IPI00908876.1 10 1 CID 43.95 4.48 1.00 1 3 547.31531 1639.93137 -3.93 30.08 3177 3177 MS2 28/56 Linfeng_091811_SIN3A_7.raw High YIcENQDSISSK IPI:IPI00908876.1 9 1 CID C3(Carbamidomethyl) 50.84 4.38 1.00 1 2 722.32257 1443.63786 -2.92 21.98 2263 2263 MS2 17/22 Linfeng_091811_SIN3A_3.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 25.48 4.38 1.00 1 3 547.31738 1639.93760 -0.14 30.11 6173 6173 MS2 22/56 Linfeng_081211_IgG_10.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 43.10 4.14 1.00 1 3 547.31671 1639.93558 -1.37 30.15 6323 6323 MS2 26/56 Linfeng_081211_IgG_8.raw High YIcENQDSISSK IPI:IPI00908876.1 9 1 CID C3(Carbamidomethyl) 58.55 4.11 1.00 1 2 722.32263 1443.63799 -2.83 22.01 2298 2298 MS2 18/22 Linfeng_091811_SIN3A_4.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 35.21 4.09 1.00 1 3 547.31677 1639.93576 -1.25 30.39 6090 6090 MS2 24/56 Linfeng_081211_IgG_5.raw High KVPQVSTPTLVEVSR IPI:IPI00745872.2 10 1 CID 53.12 3.93 1.00 1 2 820.47162 1639.93596 -1.13 30.47 6121 6121 MS2 13/28 Linfeng_081211_IgG_5.raw High YIcENQDSISSK IPI:IPI00745872.2 9 1 CID C3(Carbamidomethyl) 53.27 3.69 1.00 1 2 722.32373 1443.64018 -1.31 22.44 3854 3854 MS2 16/22 Linfeng_081211_IgG_6.raw High LVNEVTEFAK IPI:IPI00745872.2 5 1 CID 48.57 3.67 1.00 1 2 575.30994 1149.61260 -2.15 32.09 7041 7041 MS2 15/18 Linfeng_081211_IgG_3.raw High YIcENQDSISSK IPI:IPI00745872.2 9 1 CID C3(Carbamidomethyl) 28.24 3.65 1.00 1 2 722.32495 1443.64263 0.38 23.74 3899 3899 MS2 17/22 Linfeng_081211_IgG_2.raw High LVAASQAALGL IPI:IPI00745872.2 8 1 CID 28.83 3.51 1.00 1 2 507.30212 1013.59697 -2.03 37.86 5616 5616 MS2 15/20 Linfeng_081211_IgG_1.raw IPI:IPI00798375.2 544 61.5 8.85 "cDNA FLJ59357, highly similar to Probable ATP-dependent RNA helicase DDX5" 13.97 12 6 111.51 13.97 10 6 52.85 4.60 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ELAQQVQQVAAEYcR IPI:IPI00798375.2 3 1 CID C14(Carbamidomethyl) 79.40 5.57 1.00 1 2 896.93384 1792.86040 -2.41 35.96 7965 7965 MS2 19/28 Linfeng_081211_IgG_4.raw High ELAQQVQQVAAEYcR IPI:IPI00798375.2 3 1 CID C14(Carbamidomethyl) 57.73 4.82 1.00 1 3 598.29071 1792.85758 -3.99 35.96 7966 7966 MS2 28/56 Linfeng_081211_IgG_4.raw High GDGPIcLVLAPTR IPI:IPI00651653.1 10 1 CID C6(Carbamidomethyl) 97.29 4.19 1.00 1 2 684.86658 1368.72588 -3.36 38.31 4484 4484 MS2 14/24 Linfeng_091811_SIN3A_4.raw High APILIATDVASR IPI:IPI00651653.1 10 1 CID 109.90 4.12 1.00 1 2 613.85718 1226.70708 -2.69 32.85 3781 3781 MS2 18/22 Linfeng_091811_SIN3A_4.raw High TTYLVLDEADR IPI:IPI00798375.2 3 1 CID 57.62 4.00 1.00 1 2 648.32727 1295.64726 -0.43 33.60 7255 7255 MS2 16/20 Linfeng_081211_IgG_4.raw High TTYLVLDEADR IPI:IPI00798375.2 3 1 CID 58.12 3.95 1.00 1 2 648.32581 1295.64433 -2.69 33.70 7253 7253 MS2 16/20 Linfeng_081211_IgG_5.raw High TTYLVLDEADR IPI:IPI00798375.2 3 1 CID 43.17 3.95 1.00 1 2 648.32764 1295.64800 0.14 33.83 7421 7421 MS2 15/20 Linfeng_081211_IgG_6.raw High APILIATDVASR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID 99.79 3.83 1.00 1 2 613.85901 1226.71074 0.29 34.13 7806 7806 MS2 18/22 Linfeng_081211_IgG_3.raw High TGTAYTFFTPNNIK IPI:IPI00798375.2 2 1 CID 39.43 3.83 1.00 1 2 787.89526 1574.78325 -1.10 36.76 8211 8211 MS2 15/26 Linfeng_081211_IgG_4.raw High GDGPIcLVLAPTR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID C6(Carbamidomethyl) 30.24 3.69 1.00 1 2 684.86987 1368.73247 1.46 38.19 8694 8694 MS2 12/24 Linfeng_081211_IgG_4.raw High APILIATDVASR IPI:IPI00798375.2;IPI:IPI00879638.2 10 2 CID 80.40 3.58 1.00 1 2 613.85797 1226.70867 -1.40 33.12 7104 7104 MS2 14/22 Linfeng_081211_IgG_4.raw High NFYQEHPDLAR IPI:IPI00798375.2 3 1 CID 48.84 3.47 1.00 1 2 695.32959 1389.65190 -1.96 26.55 5018 5018 MS2 12/20 Linfeng_081211_IgG_4.raw IPI:IPI00964686.1 280 30.3 7.91 Putative uncharacterized protein HNRNPAB 24.29 19 5 90.94 17.50 10 4 45.54 11.43 2 2 58.96 16.43 7 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EYFGEFGEIEAIELPmDPK IPI:IPI00964686.1 8 1 CID M16(Oxidation) 71.36 6.98 1.00 1 3 744.01202 2230.02152 -2.08 45.08 5330 5330 MS2 31/72 Linfeng_091811_SIN3A_6.raw High EYFGEFGEIEAIELPmDPK 8 0 CID M16(Oxidation) 66.27 6.42 1.00 1 3 744.01257 2230.02317 -1.34 44.96 5340 5340 MS2 29/72 Linfeng_091611_rIgG_6.raw High EVYQQQQYGSGGR IPI:IPI00964686.1 8 1 CID 76.32 4.86 1.00 1 2 750.34625 1499.68523 -1.44 20.38 2064 2064 MS2 17/24 Linfeng_091811_SIN3A_6.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 76.74 4.82 1.00 1 2 752.38593 1503.76457 -2.96 32.75 3756 3756 MS2 22/26 Linfeng_091811_SIN3A_6.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 65.95 4.81 1.00 1 2 752.38721 1503.76714 -1.26 32.92 3620 3620 MS2 21/26 Linfeng_091811_SIN3A_8.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 48.02 4.76 1.00 1 2 752.38556 1503.76384 -3.45 32.90 3553 3553 MS2 20/26 Linfeng_091811_SIN3A_7.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 46.37 4.74 1.00 1 2 752.38611 1503.76494 -2.72 33.08 7027 7027 MS2 21/26 Linfeng_081211_IgG_5.raw High EVYQQQQYGSGGR IPI:IPI00964686.1 8 1 CID 54.42 4.73 1.00 1 2 750.34619 1499.68511 -1.52 20.67 3315 3315 MS2 16/24 Linfeng_081211_IgG_6.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 57.31 4.72 1.00 1 2 752.38776 1503.76824 -0.53 32.68 7220 7220 MS2 19/26 Linfeng_081211_IgG_8.raw High EVYQQQQYGSGGR 8 0 CID 76.97 4.71 1.00 1 2 750.34644 1499.68559 -1.19 20.31 2073 2073 MS2 19/24 Linfeng_091611_rIgG_6.raw High EVYQQQQYGSGGR IPI:IPI00964686.1 8 1 CID 73.13 4.49 1.00 1 2 750.34570 1499.68413 -2.17 20.23 1903 1903 MS2 17/24 Linfeng_091811_SIN3A_8.raw High EVYQQQQYGSGGR IPI:IPI00964686.1 8 1 CID 63.51 4.45 1.00 1 2 750.34692 1499.68657 -0.54 20.56 1997 1997 MS2 15/24 Linfeng_091811_SIN3A_9.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 53.27 4.29 1.00 1 2 752.38696 1503.76665 -1.58 33.19 7183 7183 MS2 16/26 Linfeng_081211_IgG_7.raw High EVYQQQQYGSGGR IPI:IPI00964686.1 8 1 CID 65.66 4.18 1.00 1 2 750.34625 1499.68523 -1.44 21.26 3300 3300 MS2 14/24 Linfeng_081211_IgG_7.raw High IFVGGLNPEATEEK IPI:IPI00964686.1 6 1 CID 56.98 3.96 1.00 1 2 752.38696 1503.76665 -1.58 33.02 7136 7136 MS2 19/26 Linfeng_081211_IgG_6.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 28.15 3.74 1.00 2 2 584.28827 1167.56926 -1.91 30.06 6072 6072 MS2 16/18 Linfeng_081211_IgG_7.raw High mFVGGLSWDTSK IPI:IPI00964686.1 8 1 CID M1(Oxidation) 39.91 3.57 1.00 1 2 672.31750 1343.62773 -1.75 35.77 8087 8087 MS2 14/22 Linfeng_081211_IgG_6.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 51.17 3.57 1.00 2 2 584.28912 1167.57097 -0.45 30.60 6318 6318 MS2 16/18 Linfeng_081211_IgG_6.raw High FGEVVDcTIK IPI:IPI00045498.4;IPI:IPI00964686.1 11 2 CID C7(Carbamidomethyl) 16.32 3.52 1.00 2 2 584.28870 1167.57012 -1.18 29.66 6137 6137 MS2 13/18 Linfeng_081211_IgG_8.raw IPI:IPI00006196.3 2101 236.4 5.80 Isoform 2 of Nuclear mitotic apparatus protein 1 22.99 55 31 267.30 6.90 11 11 303.15 11.33 19 15 353.31 15.33 25 20 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FVLDHEDGLNLNEDLENFLQK IPI:IPI00006196.3 4 1 CID 82.30 8.35 1.00 1 3 834.74170 2502.21054 -1.71 46.75 5440 5440 MS2 32/80 Linfeng_091611_rIgG_1.raw High LTAQVASLTSELTTLNATIQQQDQELAGLK IPI:IPI00006196.3 3 1 CID 108.91 8.07 1.00 1 4 797.17694 3185.68593 -1.31 52.02 6187 6187 MS2 40/174 Linfeng_091811_SIN3A_1.raw High LTAQVASLTSELTTLNATIQQQDQELAGLK IPI:IPI00006196.3 3 1 CID 139.38 8.06 1.00 1 3 1062.56860 3185.69126 0.36 52.04 6189 6189 MS2 30/116 Linfeng_091811_SIN3A_1.raw High SQAPLESSLDSLGDVFLDSGR IPI:IPI00006196.3 4 1 CID 134.59 7.18 1.00 1 3 731.69299 2193.06443 -1.22 48.63 5770 5770 MS2 33/80 Linfeng_091811_SIN3A_1.raw High LEILQQQLQVANEAR IPI:IPI00006196.3 3 1 CID 144.11 7.00 1.00 1 3 584.98889 1752.95212 -4.69 36.05 4163 4163 MS2 32/56 Linfeng_091811_SIN3A_1.raw High QQLSSLITDLQSSISNLSQAK IPI:IPI00006196.3 3 1 CID 69.74 6.79 1.00 1 3 754.40375 2261.19669 -0.76 51.90 6171 6171 MS2 32/80 Linfeng_091811_SIN3A_1.raw High LSQLEEHLSQLQDNPPQEK IPI:IPI00006196.3 4 1 CID 53.27 6.73 1.00 1 3 745.03912 2233.10282 -3.04 31.68 3589 3589 MS2 28/72 Linfeng_091811_SIN3A_1.raw High QQLSSLITDLQSSISNLSQAK IPI:IPI00006196.3 3 1 CID 78.37 6.44 1.00 1 3 754.40369 2261.19651 -0.84 51.55 6031 6031 MS2 30/80 Linfeng_091611_rIgG_1.raw High ELAEAmAAQHTAESEcEQLVK IPI:IPI00006196.3 3 1 CID "M6(Oxidation), C16(Carbamidomethyl)" 68.25 6.25 1.00 1 3 787.69275 2361.06369 -2.59 31.30 3425 3425 MS2 29/80 Linfeng_091611_rIgG_1.raw High LSQLEEHLSQLQDNPPQEK IPI:IPI00006196.3 4 1 CID 43.00 6.21 1.00 1 3 745.03894 2233.10227 -3.28 31.58 3462 3462 MS2 27/72 Linfeng_091611_rIgG_1.raw High HLcQQLQAEQAAAEK IPI:IPI00006196.3 3 1 CID C3(Carbamidomethyl) 53.20 6.11 1.00 1 3 575.61591 1724.83316 -3.10 22.93 2310 2310 MS2 29/56 Linfeng_091611_rIgG_1.raw High LEILQQQLQVANEAR IPI:IPI00006196.3 3 1 CID 101.88 6.10 1.00 1 2 876.97919 1752.95110 -5.28 36.05 4164 4164 MS2 22/28 Linfeng_091811_SIN3A_1.raw High AVQAQGGESQQEAQR IPI:IPI00006196.3 4 1 CID 63.99 6.04 1.00 1 3 529.58771 1586.74857 -2.04 14.25 1189 1189 MS2 31/56 Linfeng_091811_SIN3A_1.raw High LEILQQQLQVANEAR IPI:IPI00006196.3 3 1 CID 138.68 6.02 1.00 1 3 584.98834 1752.95047 -5.63 35.94 4034 4034 MS2 32/56 Linfeng_091611_rIgG_1.raw High KLDVEEPDSANSSFYSTR IPI:IPI00006196.3 4 1 CID 88.11 5.98 1.00 1 3 682.31836 2044.94052 -2.62 28.83 3207 3207 MS2 30/68 Linfeng_091811_SIN3A_1.raw High LEILQQQLQVANEAR IPI:IPI00006196.3 3 1 CID 97.10 5.78 1.00 1 2 876.97937 1752.95146 -5.07 35.98 4039 4039 MS2 21/28 Linfeng_091611_rIgG_1.raw High AVQAQGGESQQEAQR IPI:IPI00006196.3 4 1 CID 102.88 5.45 1.00 1 2 793.88135 1586.75542 2.27 15.89 1291 1291 MS2 22/28 Linfeng_081211_IgG_1.raw High NSLISSLEEEVSILNR IPI:IPI00006196.3 3 1 CID 117.85 5.33 1.00 1 2 901.97736 1802.94744 -1.15 50.95 6065 6065 MS2 24/30 Linfeng_091811_SIN3A_1.raw High AALMESQGQQQEER IPI:IPI00006196.3 3 1 CID 74.08 5.31 1.00 1 2 802.86865 1604.73003 -2.10 20.79 2100 2100 MS2 21/26 Linfeng_091811_SIN3A_1.raw High AQELGHSQSALASAQR IPI:IPI00006196.3 3 1 CID 59.41 5.24 1.00 1 3 551.94562 1653.82230 -4.89 20.35 2039 2039 MS2 28/60 Linfeng_091811_SIN3A_1.raw High KQQNQELQEQLR IPI:IPI00006196.3 4 1 CID 65.95 5.17 1.00 1 3 514.60437 1541.79856 -2.95 20.51 2062 2062 MS2 27/44 Linfeng_091811_SIN3A_1.raw High AALmESQGQQQEER IPI:IPI00006196.3 3 1 CID M4(Oxidation) 59.75 5.15 1.00 1 3 540.91248 1620.72287 -3.35 17.17 1594 1594 MS2 26/52 Linfeng_091811_SIN3A_1.raw High IHGTEEGQQILK IPI:IPI00006196.3 4 1 CID 37.92 5.11 1.00 1 3 451.57571 1352.71259 -3.20 21.76 2235 2235 MS2 27/44 Linfeng_091811_SIN3A_1.raw High AQELGHSQSALASAQR IPI:IPI00006196.3 3 1 CID 55.71 5.10 1.00 1 3 551.94635 1653.82450 -3.56 20.35 1955 1955 MS2 28/60 Linfeng_091611_rIgG_1.raw High AALMESQGQQQEER IPI:IPI00006196.3 3 1 CID 86.61 5.10 1.00 1 2 802.86877 1604.73027 -1.94 20.75 2011 2011 MS2 21/26 Linfeng_091611_rIgG_1.raw High DSALETLQGQLEEK IPI:IPI00006196.3 3 1 CID 56.76 5.09 1.00 1 2 780.89050 1560.77373 -0.96 43.01 7077 7077 MS2 18/26 Linfeng_081211_IgG_1.raw High AVQAQGGESQQEAQR IPI:IPI00006196.3 4 1 CID 46.21 5.08 1.00 1 3 529.58691 1586.74619 -3.54 3.88 378 378 MS2 25/56 Linfeng_091611_rIgG_1.raw High SNRDELELELAENRK IPI:IPI00006196.3 4 1 CID 21.28 5.03 1.00 1 3 605.97363 1815.90635 -7.31 26.96 2856 2856 MS2 24/56 Linfeng_091611_rIgG_1.raw High AVQAQGGESQQEAQR IPI:IPI00006196.3 4 1 CID 128.31 5.03 1.00 1 2 793.87738 1586.74748 -2.73 3.91 381 381 MS2 23/28 Linfeng_091611_rIgG_1.raw High DSALETLQGQLEEK IPI:IPI00006196.3 3 1 CID 61.77 5.03 1.00 1 2 780.88672 1560.76616 -5.81 37.85 4398 4398 MS2 20/26 Linfeng_091811_SIN3A_1.raw High KHPSSPEcLVSAQK IPI:IPI00006196.3 4 1 CID C8(Carbamidomethyl) 52.31 5.02 1.00 1 3 523.26678 1567.78580 -2.53 19.39 1820 1820 MS2 26/52 Linfeng_091611_rIgG_1.raw High NSLISSLEEEVSILNR IPI:IPI00006196.3 3 1 CID 78.58 4.99 1.00 1 3 601.65399 1802.94742 -1.16 50.60 5912 5912 MS2 31/60 Linfeng_091611_rIgG_1.raw High LEILQQQLQVANEAR IPI:IPI00006196.3 3 1 CID 56.26 4.89 1.00 1 3 584.99231 1752.96238 1.15 44.03 7377 7377 MS2 26/56 Linfeng_081211_IgG_1.raw High SLEAQVAHADQQLR IPI:IPI00006196.3 4 1 CID 83.15 4.89 1.00 1 2 783.40271 1565.79814 -3.17 28.55 3169 3169 MS2 20/26 Linfeng_091811_SIN3A_1.raw High KQQNQELQEQLR IPI:IPI00006196.3 4 1 CID 55.39 4.83 1.00 1 3 514.60449 1541.79892 -2.71 20.46 1971 1971 MS2 27/44 Linfeng_091611_rIgG_1.raw High APVPSTcSSTFPEELSPPSHQAK IPI:IPI00006196.3 4 1 CID C7(Carbamidomethyl) 23.94 4.82 1.00 1 3 818.72302 2454.15451 -2.51 30.28 3404 3404 MS2 26/88 Linfeng_091811_SIN3A_1.raw High AALmESQGQQQEER IPI:IPI00006196.3 3 1 CID M4(Oxidation) 92.25 4.74 1.00 1 2 810.86591 1620.72453 -2.33 17.15 1591 1591 MS2 19/26 Linfeng_091811_SIN3A_1.raw High SNRDELELELAENRK IPI:IPI00006196.3 4 1 CID 33.04 4.70 1.00 1 3 605.97406 1815.90763 -6.61 27.18 2982 2982 MS2 24/56 Linfeng_091811_SIN3A_1.raw High AALmESQGQQQEER IPI:IPI00006196.3 3 1 CID M4(Oxidation) 78.66 4.70 1.00 1 2 810.86646 1620.72563 -1.65 17.20 1513 1513 MS2 19/26 Linfeng_091611_rIgG_1.raw High AALmESQGQQQEER IPI:IPI00006196.3 3 1 CID M4(Oxidation) 31.81 4.55 1.00 1 3 540.91290 1620.72416 -2.56 17.22 1515 1515 MS2 25/52 Linfeng_091611_rIgG_1.raw High LQAQLNELQAQLSQK IPI:IPI00006196.3 4 1 CID 52.28 4.55 1.00 1 3 571.31610 1711.93375 -0.02 42.70 6988 6988 MS2 25/56 Linfeng_081211_IgG_1.raw High LLQAETASNSAR IPI:IPI00006196.3 3 1 CID 65.69 4.55 1.00 1 2 630.82758 1260.64787 -5.11 20.33 2036 2036 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NSLISSLEEEVSILNR IPI:IPI00006196.3 3 1 CID 69.42 4.49 1.00 1 3 601.65356 1802.94614 -1.87 50.94 6063 6063 MS2 33/60 Linfeng_091811_SIN3A_1.raw High LLQAETASNSAR IPI:IPI00006196.3 3 1 CID 64.65 4.40 1.00 1 2 630.82825 1260.64922 -4.04 20.31 1949 1949 MS2 19/22 Linfeng_091611_rIgG_1.raw High KAHGLLAEENR IPI:IPI00006196.3 3 1 CID 15.76 4.38 1.00 1 3 413.22510 1237.66074 -3.30 16.91 1558 1558 MS2 22/40 Linfeng_091811_SIN3A_1.raw High DSAQTSVTQAQR IPI:IPI00006196.3 3 1 CID 31.78 4.16 1.00 1 2 646.31488 1291.62248 -0.97 16.83 1463 1463 MS2 17/22 Linfeng_091611_rIgG_1.raw High GEVLGDVLQLETLK IPI:IPI00006196.3 3 1 CID 61.53 4.16 1.00 1 2 757.42902 1513.85076 2.30 50.02 9046 9046 MS2 18/26 Linfeng_081211_IgG_1.raw High LADDLSTLQEK IPI:IPI00006196.3 3 1 CID 42.61 4.15 1.00 1 2 616.81970 1232.63213 -3.90 28.78 3200 3200 MS2 16/20 Linfeng_091811_SIN3A_1.raw High SQAGVSSGAPPGR IPI:IPI00006196.3 4 1 CID 55.10 4.11 1.00 1 2 585.79510 1170.58293 -2.83 16.28 1470 1470 MS2 19/24 Linfeng_091811_SIN3A_1.raw High DQLQEQLQALK IPI:IPI00006196.3 3 1 CID 56.76 3.90 1.00 1 2 657.35663 1313.70598 -0.02 40.67 6410 6410 MS2 17/20 Linfeng_081211_IgG_1.raw High VLEGSELELAK IPI:IPI00006196.3 4 1 CID 32.66 3.66 1.00 1 2 594.33014 1187.65300 0.96 39.94 6190 6190 MS2 15/20 Linfeng_081211_IgG_1.raw High LLQAETASNSAR IPI:IPI00006196.3 3 1 CID 69.80 3.57 1.00 1 2 630.83026 1260.65325 -0.85 23.18 2765 2765 MS2 15/22 Linfeng_081211_IgG_1.raw High QEAATLAANNTQLQAR IPI:IPI00006196.3 3 1 CID 28.23 3.56 1.00 1 2 850.44006 1699.87285 0.35 29.11 3922 3922 MS2 16/30 Linfeng_081211_IgG_1.raw High LADDLSTLQEK IPI:IPI00006196.3 3 1 CID 50.94 3.54 1.00 1 2 616.82147 1232.63567 -1.03 34.90 5040 5040 MS2 11/20 Linfeng_081211_IgG_1.raw High TTQIINITmTK IPI:IPI00006196.3 4 1 CID M9(Oxidation) 30.69 3.49 1.00 1 2 640.34930 1279.69133 -1.04 38.48 5783 5783 MS2 13/20 Linfeng_081211_IgG_1.raw IPI:IPI00008557.6 577 63.4 9.20 Insulin-like growth factor 2 mRNA-binding protein 1 23.57 17 9 139.70 20.80 11 8 88.26 8.67 4 3 55.68 5.72 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LYIGNLNESVTPADLEK 2 0 CID 75.90 5.89 1.00 1 2 938.48480 1875.96233 -4.04 37.67 4463 4463 MS2 22/32 Linfeng_091611_rIgG_4.raw High ITISSLQDLTLYNPER 2 0 CID 63.99 5.66 1.00 1 2 931.99335 1862.97942 -3.47 42.66 5111 5111 MS2 19/30 Linfeng_091611_rIgG_4.raw High ITISSLQDLTLYNPER 2 0 CID 32.31 5.47 1.00 1 3 621.66449 1862.97892 -3.74 42.65 5110 5110 MS2 29/60 Linfeng_091611_rIgG_4.raw High LYIGNLNESVTPADLEK IPI:IPI00008557.6 2 1 CID 100.78 5.38 1.00 1 2 938.48846 1875.96965 -0.14 37.65 8522 8522 MS2 23/32 Linfeng_081211_IgG_4.raw High TVNELQNLTAAEVVVPR 2 0 CID 84.13 5.31 1.00 1 3 618.34021 1853.00608 -3.62 38.79 4608 4608 MS2 34/64 Linfeng_091611_rIgG_4.raw High TVNELQNLTAAEVVVPR IPI:IPI00008557.6 2 1 CID 76.67 5.06 1.00 1 3 618.34076 1853.00772 -2.73 39.12 4587 4587 MS2 33/64 Linfeng_091811_SIN3A_4.raw High TVNELQNLTAAEVVVPR IPI:IPI00008557.6 2 1 CID 86.37 4.95 1.00 1 2 927.01166 1853.01604 1.75 38.84 8889 8889 MS2 20/32 Linfeng_081211_IgG_4.raw High AISVHSTPEGcSSAcK IPI:IPI00008557.6 1 1 CID "C11(Carbamidomethyl), C15(Carbamidomethyl)" 23.73 4.62 1.00 1 3 564.25360 1690.74625 -3.64 18.94 1864 1864 MS2 28/60 Linfeng_091811_SIN3A_4.raw High ITISSLQDLTLYNPER IPI:IPI00008557.6 2 1 CID 51.28 4.58 1.00 1 2 931.99664 1862.98601 0.07 42.56 9968 9968 MS2 17/30 Linfeng_081211_IgG_4.raw High TVNELQNLTAAEVVVPR IPI:IPI00008557.6 2 1 CID 58.38 4.42 1.00 1 3 618.34198 1853.01139 -0.76 38.80 8875 8875 MS2 24/64 Linfeng_081211_IgG_4.raw High VSYIPDEQIAQGPENGR IPI:IPI00008557.6 1 1 CID 70.65 4.35 1.00 1 2 936.95679 1872.90630 -1.29 31.61 6607 6607 MS2 16/32 Linfeng_081211_IgG_4.raw High DQTPDENDQVIVK IPI:IPI00008557.6 2 1 CID 69.01 4.32 1.00 1 2 750.86243 1500.71758 -0.09 25.28 4584 4584 MS2 20/24 Linfeng_081211_IgG_4.raw High LYIGNLNESVTPADLEK IPI:IPI00008557.6 2 1 CID 25.01 4.32 1.00 1 3 625.99396 1875.96732 -1.38 37.67 8532 8532 MS2 27/64 Linfeng_081211_IgG_4.raw High IIGHFYASQmAQR IPI:IPI00008557.6 2 1 CID M10(Oxidation) 48.56 4.11 1.00 1 3 513.25818 1537.75998 1.25 25.32 4598 4598 MS2 26/48 Linfeng_081211_IgG_4.raw High LLVPTQYVGAIIGK IPI:IPI00008557.6 1 1 CID 83.31 4.00 1.00 1 2 736.44873 1471.89018 1.25 43.28 10137 10137 MS2 20/26 Linfeng_081211_IgG_4.raw High mVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID M1(Oxidation) 60.54 3.91 1.00 1 2 723.88593 1446.76457 -1.12 32.75 6988 6988 MS2 17/24 Linfeng_081211_IgG_4.raw High MVIITGPPEAQFK IPI:IPI00008557.6;IPI:IPI00658000.3;IPI:IPI00922068.1 11 3 CID 13.15 3.83 1.00 1 2 715.88947 1430.77165 0.26 35.75 7918 7918 MS2 15/24 Linfeng_081211_IgG_4.raw IPI:IPI00013885.1 242 27.7 5.58 Caspase-14 19.83 11 5 103.53 19.83 11 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LENLFEALNNK IPI:IPI00013885.1 1 1 CID 39.94 4.69 1.00 1 2 652.84552 1304.68376 -0.60 40.82 9809 9809 MS2 17/20 Linfeng_081211_IgG_8.raw High RDPTAEQFQEELEK IPI:IPI00013885.1 1 1 CID 25.27 4.66 1.00 1 3 573.94421 1719.81809 -0.24 30.08 6161 6161 MS2 22/52 Linfeng_081211_IgG_10.raw High LENLFEALNNK IPI:IPI00013885.1 1 1 CID 50.53 4.63 1.00 1 2 652.84760 1304.68791 2.58 40.56 9619 9619 MS2 17/20 Linfeng_081211_IgG_10.raw High DPTAEQFQEELEK IPI:IPI00013885.1 1 1 CID 59.30 4.42 1.00 1 2 782.36212 1563.71697 -0.27 34.07 7411 7411 MS2 20/24 Linfeng_081211_IgG_4.raw High DPTAEQFQEELEK IPI:IPI00013885.1 1 1 CID 34.94 4.25 1.00 1 2 782.36133 1563.71538 -1.28 34.10 7517 7517 MS2 19/24 Linfeng_081211_IgG_6.raw High mAEAELVQEGK IPI:IPI00013885.1 1 1 CID M1(Oxidation) 41.70 3.77 1.00 1 2 610.79535 1220.58342 0.50 22.99 3851 3851 MS2 16/20 Linfeng_081211_IgG_4.raw High mAEAELVQEGK IPI:IPI00013885.1 1 1 CID M1(Oxidation) 33.11 3.76 1.00 1 2 610.79376 1220.58025 -2.10 22.87 3944 3944 MS2 17/20 Linfeng_081211_IgG_10.raw High LENLFEALNNK IPI:IPI00013885.1 1 1 CID 24.11 3.74 1.00 1 2 652.84723 1304.68718 2.02 41.04 9840 9840 MS2 14/20 Linfeng_081211_IgG_7.raw High DPTAEQFQEELEK IPI:IPI00013885.1 1 1 CID 57.87 3.60 1.00 1 2 782.36115 1563.71501 -1.51 34.75 8048 8048 MS2 18/24 Linfeng_081211_IgG_3.raw High LENLFEALNNK IPI:IPI00013885.1 1 1 CID 48.39 3.60 1.00 1 2 652.84711 1304.68694 1.83 49.16 8824 8824 MS2 12/20 Linfeng_081211_IgG_1.raw High GHILELLTEVTR IPI:IPI00013885.1 1 1 CID 66.16 3.56 1.00 1 2 690.89825 1380.78923 3.35 42.29 10156 10156 MS2 15/22 Linfeng_081211_IgG_10.raw IPI:IPI00017297.1 847 94.6 6.25 Matrin-3 16.88 32 10 203.86 12.28 11 8 123.89 8.74 10 4 186.73 10.39 11 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DLSAAGIGLLAAATQSLSmPASLGR IPI:IPI00017297.1 10 1 CID M19(Oxidation) 122.29 8.79 1.00 1 3 796.42535 2387.26151 0.62 54.52 6435 6435 MS2 36/96 Linfeng_091811_SIN3A_2.raw High DLSAAGIGLLAAATQSLSmPASLGR 10 0 CID M19(Oxidation) 125.84 8.55 1.00 1 3 796.42596 2387.26334 1.39 54.41 6524 6524 MS2 38/96 Linfeng_091611_rIgG_4.raw High DLSAAGIGLLAAATQSLSmPASLGR 10 0 CID M19(Oxidation) 136.37 8.52 1.00 1 3 796.42670 2387.26554 2.31 54.35 5912 5912 MS2 38/96 Linfeng_091611_rIgG_3.raw High DLSAAGIGLLAAATQSLSmPASLGR IPI:IPI00017297.1 10 1 CID M19(Oxidation) 137.14 8.39 1.00 1 3 796.42578 2387.26279 1.16 54.52 6415 6415 MS2 35/96 Linfeng_091811_SIN3A_3.raw High DLSAAGIGLLAAATQSLSMPASLGR 10 0 CID 130.91 7.91 1.00 1 3 791.09369 2371.26651 0.59 54.90 5982 5982 MS2 36/96 Linfeng_091611_rIgG_3.raw High DLSAAGIGLLAAATQSLSmPASLGR 10 0 CID M19(Oxidation) 82.99 7.03 1.00 1 4 597.57153 2387.26430 1.79 54.40 5919 5919 MS2 46/144 Linfeng_091611_rIgG_3.raw High IEELDQENEAALENGIK IPI:IPI00017297.1 6 1 CID 71.19 6.33 1.00 1 2 957.96576 1914.92424 -2.58 33.72 7661 7661 MS2 22/32 Linfeng_081211_IgG_3.raw High IGPYQPNVPVGIDYVIPK IPI:IPI00017297.1 5 1 CID 98.10 5.82 1.00 1 3 657.02942 1969.07370 -2.89 41.40 4865 4865 MS2 33/68 Linfeng_091811_SIN3A_3.raw High IGPYQPNVPVGIDYVIPK IPI:IPI00017297.1 5 1 CID 85.24 5.81 1.00 1 3 657.02838 1969.07059 -4.47 41.46 4838 4838 MS2 34/68 Linfeng_091811_SIN3A_2.raw High IGPYQPNVPVGIDYVIPK 5 0 CID 80.66 5.71 1.00 1 3 657.02899 1969.07242 -3.54 41.21 4299 4299 MS2 33/68 Linfeng_091611_rIgG_3.raw High GDADQASNILASFGLSAR IPI:IPI00017297.1 4 1 CID 30.13 5.62 1.00 1 3 598.29846 1792.88083 -0.94 45.85 5428 5428 MS2 34/68 Linfeng_091811_SIN3A_3.raw High GDADQASNILASFGLSAR 4 0 CID 92.82 5.53 1.00 1 2 896.94385 1792.88042 -1.17 45.60 4856 4856 MS2 23/34 Linfeng_091611_rIgG_3.raw High DLSAAGIGLLAAATQSLSmPASLGR IPI:IPI00017297.1 10 1 CID M19(Oxidation) 46.41 5.43 1.00 1 4 597.57098 2387.26211 0.87 54.56 6441 6441 MS2 43/144 Linfeng_091811_SIN3A_2.raw High GDADQASNILASFGLSAR IPI:IPI00017297.1 4 1 CID 39.91 5.30 1.00 1 3 598.29736 1792.87754 -2.77 45.80 5388 5388 MS2 36/68 Linfeng_091811_SIN3A_2.raw High GDADQASNILASFGLSAR 4 0 CID 33.75 5.23 1.00 1 3 598.29773 1792.87864 -2.16 45.51 4845 4845 MS2 35/68 Linfeng_091611_rIgG_3.raw High GDADQASNILASFGLSAR 4 0 CID 24.47 5.17 1.00 1 3 598.29791 1792.87918 -1.86 45.68 5491 5491 MS2 28/68 Linfeng_091611_rIgG_4.raw High ITPENLPQILLQLK IPI:IPI00017297.1 4 1 CID 51.69 4.87 1.00 1 3 540.66101 1619.96848 -2.88 48.19 5689 5689 MS2 28/52 Linfeng_091811_SIN3A_2.raw High IGPYQPNVPVGIDYVIPK IPI:IPI00017297.1 5 1 CID 110.61 4.75 1.00 1 2 985.03986 1969.07244 -3.54 41.51 4844 4844 MS2 18/34 Linfeng_091811_SIN3A_2.raw High IEELDQENEAALENGIK IPI:IPI00017297.1 6 1 CID 46.37 4.74 1.00 1 3 638.98016 1914.92594 -1.70 33.74 7666 7666 MS2 29/64 Linfeng_081211_IgG_3.raw High IGPYQPNVPVGIDYVIPK IPI:IPI00017297.1 5 1 CID 55.32 4.72 1.00 1 2 985.04382 1969.08037 0.49 42.67 10763 10763 MS2 20/34 Linfeng_081211_IgG_3.raw High IGPYQPNVPVGIDYVIPK IPI:IPI00017297.1 5 1 CID 68.32 4.68 1.00 1 3 657.03174 1969.08066 0.64 42.66 10762 10762 MS2 29/68 Linfeng_081211_IgG_3.raw High IGPYQPNVPVGIDYVIPK 5 0 CID 84.77 4.64 1.00 1 2 985.03912 1969.07097 -4.28 41.30 4311 4311 MS2 18/34 Linfeng_091611_rIgG_3.raw High LcSLFYTNEEVAK IPI:IPI00017297.1 5 1 CID C2(Carbamidomethyl) 46.95 4.28 1.00 1 2 787.37982 1573.75237 -2.77 34.42 3960 3960 MS2 16/24 Linfeng_091811_SIN3A_3.raw High LcSLFYTNEEVAK IPI:IPI00017297.1 5 1 CID C2(Carbamidomethyl) 72.60 4.17 1.00 1 2 787.37885 1573.75041 -4.01 34.54 3934 3934 MS2 17/24 Linfeng_091811_SIN3A_2.raw High LcSLFYTNEEVAK 5 0 CID C2(Carbamidomethyl) 83.37 4.07 1.00 1 2 787.38007 1573.75286 -2.46 34.24 3413 3413 MS2 17/24 Linfeng_091611_rIgG_3.raw High DLDELSRYPEDK IPI:IPI00017297.1 4 1 CID 74.24 4.07 1.00 1 2 740.35077 1479.69426 -1.34 30.80 6569 6569 MS2 12/22 Linfeng_081211_IgG_3.raw High GDADQASNILASFGLSAR IPI:IPI00017297.1 4 1 CID 22.60 3.94 1.00 1 2 896.94415 1792.88103 -0.83 45.50 10595 10595 MS2 16/34 Linfeng_081211_IgG_4.raw High TEEGPTLSYGR IPI:IPI00017297.1 4 1 CID 48.36 3.88 1.00 1 2 605.28998 1209.57268 -1.63 26.76 5231 5231 MS2 16/20 Linfeng_081211_IgG_3.raw High RTEEGPTLSYGR IPI:IPI00017297.1 4 1 CID 58.07 3.84 1.00 1 2 683.34003 1365.67278 -2.19 24.32 4411 4411 MS2 12/22 Linfeng_081211_IgG_3.raw High GNLGAGNGNLQGPR IPI:IPI00017297.1 12 1 CID 84.14 3.83 1.00 1 2 662.83929 1324.67131 -0.30 23.70 4213 4213 MS2 18/26 Linfeng_081211_IgG_3.raw High LcSLFYTNEEVAK IPI:IPI00017297.1 5 1 CID C2(Carbamidomethyl) 54.80 3.66 1.00 1 2 787.38123 1573.75517 -0.99 35.68 8398 8398 MS2 17/24 Linfeng_081211_IgG_3.raw High LcSLFYTNEEVAK IPI:IPI00017297.1 5 1 CID C2(Carbamidomethyl) 62.36 3.55 1.00 1 2 787.38239 1573.75749 0.49 34.88 7655 7655 MS2 16/24 Linfeng_081211_IgG_4.raw IPI:IPI00018534.4 126 13.9 10.32 Histone H2B type 1-L 21.43 79 3 368.17 19.84 11 2 283.64 21.43 32 2 331.36 21.43 36 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 93.41 6.52 1.00 1 3 581.94330 1743.81534 -2.32 49.16 5634 5634 MS2 29/56 Linfeng_091811_SIN3A_10.raw High AMGIMNSFVNDIFER 18 0 CID 113.12 6.51 1.00 1 3 581.94385 1743.81699 -1.38 48.93 5428 5428 MS2 33/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 85.67 6.44 1.00 1 3 592.60614 1775.80387 -3.02 41.81 4819 4819 MS2 28/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 88.88 6.42 1.00 1 3 587.27527 1759.81125 -1.74 47.04 5471 5471 MS2 32/56 Linfeng_091811_SIN3A_9.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 93.17 6.41 1.00 1 3 581.94403 1743.81754 -1.06 49.21 5723 5723 MS2 30/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 89.51 6.34 1.00 1 3 587.27502 1759.81052 -2.15 46.77 5350 5350 MS2 31/56 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 74.06 6.26 1.00 1 3 587.27502 1759.81052 -2.15 46.53 5129 5129 MS2 31/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 82.77 6.14 1.00 1 3 592.60663 1775.80533 -2.19 41.40 4487 4487 MS2 28/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 92.13 6.00 1.00 1 2 880.41077 1759.81426 -0.03 47.55 5256 5256 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 53.02 5.99 1.00 1 3 592.60645 1775.80478 -2.50 44.83 5197 5197 MS2 28/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 101.25 5.98 1.00 1 2 880.41089 1759.81450 0.11 46.50 5363 5363 MS2 24/28 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 52.17 5.96 1.00 1 3 592.60693 1775.80625 -1.67 45.49 4999 4999 MS2 26/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 83.95 5.94 1.00 1 3 592.60651 1775.80497 -2.40 41.51 4734 4734 MS2 29/56 Linfeng_091611_rIgG_9.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 95.70 5.92 1.00 1 2 872.41266 1743.81804 -0.77 49.13 5631 5631 MS2 21/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 99.52 5.92 1.00 1 2 880.40948 1759.81169 -1.48 46.84 5548 5548 MS2 22/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 43.94 5.87 1.00 1 3 592.60681 1775.80588 -1.88 44.44 4868 4868 MS2 27/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 97.14 5.84 1.00 1 2 880.40924 1759.81120 -1.76 47.07 5360 5360 MS2 23/28 Linfeng_091811_SIN3A_7.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 97.67 5.82 1.00 1 3 587.27490 1759.81015 -2.36 43.66 4772 4772 MS2 31/56 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 90.07 5.82 1.00 1 2 872.41290 1743.81853 -0.49 49.19 5720 5720 MS2 23/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 100.78 5.82 1.00 1 2 880.40973 1759.81218 -1.21 47.80 5560 5560 MS2 23/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 93.01 5.81 1.00 1 2 880.40985 1759.81243 -1.07 46.76 5348 5348 MS2 24/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 101.25 5.81 1.00 1 2 880.41016 1759.81304 -0.72 46.83 5445 5445 MS2 24/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 98.16 5.81 1.00 1 2 880.40942 1759.81157 -1.55 46.52 5128 5128 MS2 23/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 47.81 5.80 1.00 1 3 587.27594 1759.81327 -0.59 46.47 5360 5360 MS2 26/56 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 46.17 5.76 1.00 1 3 592.60663 1775.80533 -2.19 46.45 5119 5119 MS2 29/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 74.50 5.76 1.00 1 3 592.60620 1775.80405 -2.91 41.74 4715 4715 MS2 29/56 Linfeng_091811_SIN3A_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 98.88 5.74 1.00 1 2 880.40820 1759.80913 -2.94 43.90 4989 4989 MS2 22/28 Linfeng_091811_SIN3A_10.raw High AMGIMNSFVNDIFER 18 0 CID 107.36 5.55 1.00 1 2 872.41333 1743.81938 0.00 48.84 5416 5416 MS2 22/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 98.94 5.55 1.00 1 2 880.40826 1759.80925 -2.87 43.71 5013 5013 MS2 19/28 Linfeng_091611_rIgG_9.raw High SRKESYSVYVYK IPI:IPI00477495.3 13 1 CID 61.40 5.51 1.00 1 3 503.59503 1508.77054 -2.55 22.84 2319 2319 MS2 24/44 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 81.85 5.50 1.00 1 2 888.40607 1775.80486 -2.46 41.73 4714 4714 MS2 21/28 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 53.94 5.49 1.00 1 3 592.60663 1775.80533 -2.19 46.91 5455 5455 MS2 26/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 88.29 5.48 1.00 1 2 880.41034 1759.81340 -0.51 46.67 5555 5555 MS2 22/28 Linfeng_091611_rIgG_6.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 101.11 5.48 1.00 1 2 880.40967 1759.81206 -1.28 48.69 5398 5398 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 101.79 5.48 1.00 1 2 880.40863 1759.80998 -2.46 43.64 4769 4769 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 32.23 5.48 1.00 1 3 592.60748 1775.80790 -0.75 47.51 5251 5251 MS2 25/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 43.84 5.47 1.00 1 3 592.60529 1775.80130 -4.46 43.45 4932 4932 MS2 28/56 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 102.96 5.46 1.00 1 2 880.41077 1759.81426 -0.03 46.48 5407 5407 MS2 22/28 Linfeng_091611_rIgG_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 84.24 5.45 1.00 1 2 888.40784 1775.80840 -0.46 45.12 4953 4953 MS2 20/28 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 95.20 5.45 1.00 1 2 880.40955 1759.81182 -1.42 47.82 5470 5470 MS2 19/28 Linfeng_091811_SIN3A_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 99.36 5.41 1.00 1 2 880.40863 1759.80998 -2.46 44.00 5095 5095 MS2 22/28 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 106.08 5.39 1.00 1 2 880.41040 1759.81352 -0.44 52.20 5830 5830 MS2 22/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 97.17 5.34 1.00 1 2 888.40656 1775.80583 -1.91 41.36 4482 4482 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID 101.22 5.31 1.00 1 2 872.41254 1743.81780 -0.91 49.16 5837 5837 MS2 18/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 54.03 5.29 1.00 1 3 592.60602 1775.80350 -3.22 43.53 5036 5036 MS2 27/56 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 84.55 5.28 1.00 1 2 888.40576 1775.80425 -2.80 41.80 4818 4818 MS2 21/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 83.46 5.28 1.00 1 2 888.40601 1775.80474 -2.53 41.76 4905 4905 MS2 21/28 Linfeng_091811_SIN3A_1.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 75.49 5.27 1.00 1 2 888.40411 1775.80095 -4.66 46.09 5074 5074 MS2 21/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 75.65 5.27 1.00 1 2 888.40643 1775.80559 -2.05 43.77 4785 4785 MS2 21/28 Linfeng_091611_rIgG_10.raw High AMGIMNSFVNDIFER 18 0 CID 104.39 5.26 1.00 1 2 872.41266 1743.81804 -0.77 48.93 5646 5646 MS2 23/28 Linfeng_091611_rIgG_9.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 66.48 5.24 1.00 1 2 880.41217 1759.81706 1.57 49.77 5531 5531 MS2 16/28 Linfeng_091611_rIgG_10.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 89.85 5.22 1.00 1 3 587.27454 1759.80906 -2.98 43.91 4991 4991 MS2 33/56 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 89.72 5.20 1.00 1 2 888.40637 1775.80547 -2.11 41.42 4722 4722 MS2 21/28 Linfeng_091611_rIgG_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 87.89 5.17 1.00 1 2 888.40564 1775.80400 -2.94 43.47 5029 5029 MS2 20/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 37.62 5.17 1.00 1 3 592.60638 1775.80460 -2.60 45.86 5324 5324 MS2 25/56 Linfeng_091811_SIN3A_9.raw High SRKESYSVYVYK 13 0 CID 42.61 5.15 1.00 1 3 503.59616 1508.77393 -0.31 22.58 2056 2056 MS2 23/44 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 39.85 5.14 1.00 1 3 592.60889 1775.81211 1.62 41.38 9866 9866 MS2 25/56 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 75.27 5.11 1.00 1 2 888.40802 1775.80876 -0.26 46.05 5348 5348 MS2 21/28 Linfeng_091811_SIN3A_9.raw High AMGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M5(Oxidation) 74.36 5.11 1.00 1 3 587.27454 1759.80906 -2.98 43.96 5090 5090 MS2 32/56 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 83.99 5.02 1.00 1 2 888.40668 1775.80608 -1.77 44.89 5205 5205 MS2 19/28 Linfeng_091811_SIN3A_9.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 73.01 5.00 1.00 1 2 888.40729 1775.80730 -1.08 52.60 5877 5877 MS2 17/28 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 62.21 5.00 1.00 1 2 888.40674 1775.80620 -1.70 41.66 10042 10042 MS2 18/28 Linfeng_081211_IgG_8.raw High AmGImNSFVNDIFER 18 0 CID "M2(Oxidation), M5(Oxidation)" 42.65 4.90 1.00 1 3 592.60657 1775.80515 -2.29 43.18 4712 4712 MS2 28/56 Linfeng_091611_rIgG_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 40.77 4.88 1.00 1 3 587.27515 1759.81089 -1.94 47.78 5465 5465 MS2 26/56 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 41.47 4.86 1.00 1 3 592.60767 1775.80844 -0.44 41.66 10044 10044 MS2 20/56 Linfeng_081211_IgG_8.raw High AMGImNSFVNDIFER 18 0 CID M5(Oxidation) 34.76 4.85 1.00 1 3 587.27606 1759.81363 -0.38 47.56 5257 5257 MS2 26/56 Linfeng_091611_rIgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 76.82 4.83 1.00 1 2 888.41107 1775.81487 3.18 41.80 10089 10089 MS2 17/28 Linfeng_081211_IgG_7.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 43.74 4.78 1.00 1 3 592.60645 1775.80478 -2.50 44.98 5125 5125 MS2 25/56 Linfeng_091811_SIN3A_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 87.55 4.77 1.00 1 2 888.40979 1775.81230 1.74 41.31 9840 9840 MS2 21/28 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 51.64 4.75 1.00 1 2 888.40698 1775.80669 -1.43 41.60 10023 10023 MS2 12/28 Linfeng_081211_IgG_8.raw High AmGImNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID "M2(Oxidation), M5(Oxidation)" 81.44 4.63 1.00 1 2 888.40698 1775.80669 -1.43 41.24 9816 9816 MS2 18/28 Linfeng_081211_IgG_10.raw High AmGImNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID "M2(Oxidation), M5(Oxidation)" 72.11 4.62 1.00 1 2 888.40802 1775.80876 -0.26 45.98 5250 5250 MS2 16/28 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER 18 0 CID M2(Oxidation) 43.01 4.56 1.00 1 2 880.40790 1759.80852 -3.29 50.82 5661 5661 MS2 12/28 Linfeng_091611_rIgG_10.raw High SRKESYSVYVYK IPI:IPI00477495.3 13 1 CID 41.22 4.46 1.00 1 3 503.59464 1508.76935 -3.34 22.79 2198 2198 MS2 24/44 Linfeng_091811_SIN3A_10.raw High AmGIMNSFVNDIFER IPI:IPI00003935.6;IPI:IPI00477495.3 18 2 CID M2(Oxidation) 18.23 4.42 1.00 1 3 587.27625 1759.81418 -0.07 52.59 6109 6109 MS2 19/56 Linfeng_091811_SIN3A_9.raw High AmGIMNSFVNDIFER IPI:IPI00152785.3;IPI:IPI00303133.8 18 2 CID M2(Oxidation) 20.86 4.41 1.00 1 3 587.27728 1759.81729 1.70 46.55 11312 11312 MS2 24/56 Linfeng_081211_IgG_10.raw High KESYSVYVYK IPI:IPI00303133.8 13 1 CID 50.79 3.70 1.00 1 2 633.32208 1265.63689 -3.44 25.71 4825 4825 MS2 15/18 Linfeng_081211_IgG_10.raw High KESYSVYVYK IPI:IPI00303133.8 13 1 CID 52.89 3.50 1.00 1 2 633.32281 1265.63835 -2.28 35.65 5961 5961 MS2 16/18 Linfeng_081211_IgG_9.raw High KESYSVYVYK IPI:IPI00303133.8 13 1 CID 52.35 3.47 1.00 1 2 633.32336 1265.63945 -1.41 25.57 4887 4887 MS2 14/18 Linfeng_081211_IgG_8.raw IPI:IPI00025753.2 1049 113.7 5.03 Desmoglein-1 6.01 11 4 290.37 6.01 11 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ISGVGIDQPPYGIFVINQK IPI:IPI00025753.2 1 1 CID 85.89 5.56 1.00 1 3 682.37451 2045.10898 1.12 42.54 10266 10266 MS2 23/72 Linfeng_081211_IgG_8.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 68.47 5.08 1.00 1 2 875.92474 1750.84221 -0.42 35.71 8066 8066 MS2 22/30 Linfeng_081211_IgG_6.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 60.22 5.05 1.00 1 2 875.92389 1750.84050 -1.40 35.30 8129 8129 MS2 19/30 Linfeng_081211_IgG_8.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 51.28 4.94 1.00 1 2 875.92548 1750.84368 0.42 36.24 8574 8574 MS2 22/30 Linfeng_081211_IgG_3.raw High IHSDcAANQQVTYR IPI:IPI00025753.2 1 1 CID C5(Carbamidomethyl) 64.02 4.76 1.00 1 3 554.92639 1662.76462 -0.42 19.83 3042 3042 MS2 23/52 Linfeng_081211_IgG_6.raw High YQGTILSIDDNLQR IPI:IPI00025753.2 1 1 CID 62.79 4.61 1.00 1 2 818.41943 1635.83159 -1.31 36.08 8003 8003 MS2 17/26 Linfeng_081211_IgG_4.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 48.69 4.58 1.00 1 2 875.92474 1750.84221 -0.42 42.60 6955 6955 MS2 19/30 Linfeng_081211_IgG_1.raw High ISGVGIDQPPYGIFVINQK IPI:IPI00025753.2 1 1 CID 25.16 4.51 1.00 1 3 682.37555 2045.11209 2.64 48.84 8745 8745 MS2 22/72 Linfeng_081211_IgG_1.raw High ISGVGIDQPPYGIFVINQK IPI:IPI00025753.2 1 1 CID 30.28 4.38 1.00 1 2 1023.06006 2045.11284 3.01 48.85 8749 8749 MS2 16/36 Linfeng_081211_IgG_1.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 74.67 4.32 1.00 1 2 875.92340 1750.83953 -1.95 35.42 7834 7834 MS2 19/30 Linfeng_081211_IgG_4.raw High YVmGNNPADLLAVDSR IPI:IPI00025753.2 1 1 CID M3(Oxidation) 22.71 3.52 1.00 1 2 875.92792 1750.84856 3.21 37.56 6421 6421 MS2 17/30 Linfeng_081211_IgG_9.raw IPI:IPI00217975.4 586 66.4 5.16 Lamin-B1 34.98 30 14 169.14 18.26 11 9 149.63 16.55 8 6 138.30 25.77 11 9 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLEGDLEDLKDQIAQLEASLAAAK IPI:IPI00217975.4 2 1 CID 134.24 7.96 1.00 1 3 843.44141 2528.30967 0.21 54.75 6365 6365 MS2 38/92 Linfeng_091811_SIN3A_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR IPI:IPI00217975.4 1 1 CID 140.91 7.85 1.00 1 4 853.64655 3411.56435 -2.01 44.99 5405 5405 MS2 48/174 Linfeng_091611_rIgG_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR IPI:IPI00217975.4 1 1 CID 300.00 6.79 1.00 1 4 853.64685 3411.56557 -1.65 45.29 5387 5387 MS2 42/174 Linfeng_091811_SIN3A_4.raw High SLEGDLEDLKDQIAQLEASLAAAK IPI:IPI00217975.4 2 1 CID 104.28 6.62 1.00 1 4 632.83319 2528.31093 0.71 54.76 6366 6366 MS2 37/138 Linfeng_091811_SIN3A_4.raw High DQmQQQLNDYEQLLDVK IPI:IPI00217975.4 2 1 CID M3(Oxidation) 68.01 6.45 1.00 1 3 708.66705 2123.98661 -2.28 41.01 4831 4831 MS2 34/64 Linfeng_091811_SIN3A_4.raw High DQMQQQLNDYEQLLDVK IPI:IPI00217975.4 2 1 CID 89.23 6.15 1.00 1 3 703.33521 2107.99106 -2.60 44.53 5347 5347 MS2 32/64 Linfeng_091611_rIgG_4.raw High SLETENSALQLQVTER IPI:IPI00217975.4 2 1 CID 84.17 6.10 1.00 1 2 909.46277 1817.91826 -3.17 32.95 3793 3793 MS2 21/30 Linfeng_091811_SIN3A_4.raw High SLETENSALQLQVTER IPI:IPI00217975.4 2 1 CID 65.50 5.97 1.00 1 2 909.46655 1817.92583 0.99 32.94 7051 7051 MS2 20/30 Linfeng_081211_IgG_4.raw High IESLSSQLSNLQK IPI:IPI00217975.4 2 1 CID 59.77 5.67 1.00 1 2 723.89142 1446.77556 -3.00 33.32 3897 3897 MS2 21/24 Linfeng_091611_rIgG_4.raw High SLETENSALQLQVTER IPI:IPI00217975.4 2 1 CID 43.70 5.33 1.00 1 3 606.64624 1817.92417 0.08 32.97 7061 7061 MS2 27/60 Linfeng_081211_IgG_4.raw High IESLSSQLSNLQK IPI:IPI00217975.4 2 1 CID 54.71 5.31 1.00 1 2 723.89203 1446.77678 -2.16 33.75 3895 3895 MS2 21/24 Linfeng_091811_SIN3A_4.raw High LSSEMNTSTVNSAR IPI:IPI00217975.4 2 1 CID 77.19 5.00 1.00 1 2 748.85101 1496.69475 -4.18 22.43 2357 2357 MS2 20/26 Linfeng_091811_SIN3A_4.raw High LSSEMNTSTVNSAR IPI:IPI00217975.4 2 1 CID 58.49 4.91 1.00 1 2 748.85205 1496.69682 -2.80 22.10 2372 2372 MS2 21/26 Linfeng_091611_rIgG_4.raw High IESLSSQLSNLQK IPI:IPI00217975.4 2 1 CID 39.87 4.86 1.00 1 3 482.92993 1446.77524 -3.22 33.37 3904 3904 MS2 26/48 Linfeng_091611_rIgG_4.raw High LSSEmNTSTVNSAR IPI:IPI00217975.4 2 1 CID M5(Oxidation) 102.98 4.79 1.00 1 2 756.84973 1512.69219 -2.47 17.39 1711 1711 MS2 21/26 Linfeng_091611_rIgG_4.raw High LYKEELEQTYHAK IPI:IPI00217975.4 2 1 CID 8.91 4.62 1.00 1 3 551.28052 1651.82700 -3.42 23.64 2527 2527 MS2 16/48 Linfeng_091811_SIN3A_4.raw High NQNSWGTGEDVK IPI:IPI00217975.4 1 1 CID 41.26 4.57 1.00 1 2 667.80035 1334.59343 -2.82 22.94 2430 2430 MS2 16/22 Linfeng_091811_SIN3A_4.raw High IESLSSQLSNLQK IPI:IPI00217975.4 2 1 CID 50.30 4.39 1.00 1 2 723.89404 1446.78081 0.63 33.69 7283 7283 MS2 19/24 Linfeng_081211_IgG_4.raw High DAALATALGDKK IPI:IPI00217975.4 2 1 CID 72.78 4.34 1.00 1 2 587.32544 1173.64360 -3.28 25.76 2827 2827 MS2 18/22 Linfeng_091811_SIN3A_4.raw High NQNSWGTGEDVK IPI:IPI00217975.4 1 1 CID 50.02 4.34 1.00 1 2 667.80322 1334.59917 1.48 23.68 4044 4044 MS2 18/22 Linfeng_081211_IgG_4.raw High LSSEmNTSTVNSAR IPI:IPI00217975.4 2 1 CID M5(Oxidation) 65.95 4.32 1.00 1 2 756.84991 1512.69255 -2.23 17.62 1677 1677 MS2 19/26 Linfeng_091811_SIN3A_4.raw High DAALATALGDKK IPI:IPI00217975.4 2 1 CID 79.84 4.21 1.00 1 2 587.32465 1173.64202 -4.63 25.39 2835 2835 MS2 18/22 Linfeng_091611_rIgG_4.raw High SmYEEEINETR IPI:IPI00217975.4 2 1 CID M2(Oxidation) 48.55 4.09 1.00 1 2 708.79718 1416.58708 -5.45 23.63 2588 2588 MS2 17/20 Linfeng_091611_rIgG_4.raw High DAALATALGDKK IPI:IPI00217975.4 2 1 CID 80.80 4.06 1.00 1 2 587.32709 1173.64690 -0.47 26.33 4931 4931 MS2 18/22 Linfeng_081211_IgG_4.raw High cQSLTEDLEFR IPI:IPI00217975.4 2 1 CID C1(Carbamidomethyl) 45.14 3.77 1.00 1 2 699.32117 1397.63506 -1.11 35.22 7775 7775 MS2 17/20 Linfeng_081211_IgG_4.raw High ALYETELADAR IPI:IPI00217975.4 2 1 CID 38.93 3.73 1.00 1 2 626.31427 1251.62126 -0.28 30.54 6239 6239 MS2 16/20 Linfeng_081211_IgG_4.raw High SmYEEEINETR IPI:IPI00217975.4 2 1 CID M2(Oxidation) 55.97 3.68 1.00 1 2 708.80084 1416.59441 -0.28 24.38 4280 4280 MS2 17/20 Linfeng_081211_IgG_4.raw High ALYETELADAR IPI:IPI00217975.4 2 1 CID 36.23 3.59 1.00 1 2 626.31512 1251.62297 1.09 31.50 6818 6818 MS2 16/20 Linfeng_081211_IgG_3.raw High LREYEAALNSK IPI:IPI00217975.4 2 1 CID 24.40 3.49 1.00 1 2 647.34399 1293.68071 0.71 23.66 4040 4040 MS2 14/20 Linfeng_081211_IgG_4.raw High IQELEDLLAK IPI:IPI00217975.4 2 1 CID 45.92 3.47 1.00 1 2 586.33154 1171.65581 -0.97 37.75 8554 8554 MS2 16/18 Linfeng_081211_IgG_4.raw IPI:IPI00396435.3 795 90.9 7.46 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 15.35 23 10 134.45 12.70 11 8 109.47 5.28 5 3 152.99 6.42 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EVDDLGPEVGDIK IPI:IPI00396435.3 1 1 CID 36.80 5.13 1.00 1 2 693.34113 1385.67497 -3.30 31.71 3606 3606 MS2 19/24 Linfeng_091811_SIN3A_3.raw High EVDDLGPEVGDIK IPI:IPI00396435.3 1 1 CID 40.96 4.80 1.00 1 2 693.34271 1385.67815 -1.01 32.29 6725 6725 MS2 18/24 Linfeng_081211_IgG_5.raw High EVDDLGPEVGDIK IPI:IPI00396435.3 1 1 CID 43.07 4.65 1.00 1 2 693.34253 1385.67778 -1.28 32.77 7301 7301 MS2 19/24 Linfeng_081211_IgG_3.raw High FAHIDGDHLTLLNVYHAFK IPI:IPI00396435.3 1 1 CID 28.85 4.64 1.00 1 4 553.53693 2211.12588 -3.96 38.31 3929 3929 MS2 33/108 Linfeng_091611_rIgG_3.raw High TLATDILMGVLK IPI:IPI00396435.3 1 1 CID 69.59 4.59 1.00 1 2 637.87164 1274.73601 -2.28 49.92 5935 5935 MS2 19/22 Linfeng_091811_SIN3A_3.raw High IRVESLLVTAISK IPI:IPI00396435.3 1 1 CID 59.55 4.46 1.00 1 3 476.96265 1428.87339 -3.59 37.93 4417 4417 MS2 23/48 Linfeng_091811_SIN3A_3.raw High TLATDILmGVLK IPI:IPI00396435.3 1 1 CID M8(Oxidation) 42.85 4.46 1.00 1 2 645.86926 1290.73125 -2.00 47.30 5691 5691 MS2 19/22 Linfeng_091611_rIgG_4.raw High TLATDILmGVLK IPI:IPI00396435.3 1 1 CID M8(Oxidation) 57.20 4.42 1.00 1 2 645.86951 1290.73174 -1.62 47.56 5639 5639 MS2 19/22 Linfeng_091811_SIN3A_3.raw High TLATDILMGVLK IPI:IPI00396435.3 1 1 CID 60.38 4.39 1.00 1 2 637.87097 1274.73467 -3.33 49.66 5359 5359 MS2 19/22 Linfeng_091611_rIgG_3.raw High TLATDILmGVLK IPI:IPI00396435.3 1 1 CID M8(Oxidation) 62.85 4.32 1.00 1 2 645.86835 1290.72942 -3.42 47.32 5067 5067 MS2 19/22 Linfeng_091611_rIgG_3.raw High TEMQDNTYPEILR IPI:IPI00396435.3 1 1 CID 87.48 4.21 1.00 1 2 805.37793 1609.74858 -2.56 33.35 3822 3822 MS2 19/24 Linfeng_091811_SIN3A_3.raw High VESLLVTAISK IPI:IPI00396435.3 1 1 CID 64.22 4.19 1.00 1 2 580.34656 1159.68584 -6.45 35.68 4124 4124 MS2 18/20 Linfeng_091811_SIN3A_3.raw High VESLLVTAISK IPI:IPI00396435.3 1 1 CID 76.05 4.19 1.00 1 2 580.35107 1159.69487 1.34 36.92 8817 8817 MS2 18/20 Linfeng_081211_IgG_3.raw High ASTNAmLISAGLPPLK IPI:IPI00396435.3 1 1 CID M6(Oxidation) 81.18 4.15 1.00 1 2 800.44232 1599.87737 -0.11 36.79 8769 8769 MS2 16/30 Linfeng_081211_IgG_3.raw High TLATDILmGVLK IPI:IPI00396435.3 1 1 CID M8(Oxidation) 51.38 4.11 1.00 1 2 645.87097 1290.73467 0.65 47.74 5675 5675 MS2 18/22 Linfeng_091811_SIN3A_4.raw High HQSFVLVGETGSGK IPI:IPI00396435.3 1 1 CID 19.44 4.09 1.00 1 3 482.58353 1445.73603 -1.63 30.05 6290 6290 MS2 24/52 Linfeng_081211_IgG_3.raw High SNLGSVVLQLK IPI:IPI00396435.3 1 1 CID 44.42 4.07 1.00 1 2 579.34497 1157.68266 -5.39 35.92 4235 4235 MS2 16/20 Linfeng_091611_rIgG_4.raw High EVDDLGPEVGDIK IPI:IPI00396435.3 1 1 CID 43.92 3.89 1.00 1 2 693.34253 1385.67778 -1.28 32.15 6780 6780 MS2 12/24 Linfeng_081211_IgG_4.raw High TEmQDNTYPEILR IPI:IPI00396435.3 1 1 CID M3(Oxidation) 57.44 3.87 1.00 1 2 813.37640 1625.74553 -1.29 32.78 7308 7308 MS2 18/24 Linfeng_081211_IgG_3.raw High SNLGSVVLQLK IPI:IPI00396435.3 1 1 CID 41.77 3.84 1.00 1 2 579.34680 1157.68633 -2.22 37.31 8941 8941 MS2 17/20 Linfeng_081211_IgG_3.raw High SNLGSVVLQLK IPI:IPI00396435.3 1 1 CID 53.63 3.84 1.00 1 2 579.34827 1157.68926 0.31 36.39 8095 8095 MS2 16/20 Linfeng_081211_IgG_4.raw High TLATDILmGVLK IPI:IPI00396435.3 1 1 CID M8(Oxidation) 42.56 3.81 1.00 1 2 645.87122 1290.73516 1.03 47.44 11172 11172 MS2 16/22 Linfeng_081211_IgG_5.raw High LDLGEDYPSGK IPI:IPI00396435.3 1 1 CID 82.33 3.72 1.00 1 2 597.28711 1193.56694 -1.31 30.20 6345 6345 MS2 18/20 Linfeng_081211_IgG_3.raw IPI:IPI00397801.4 2391 247.9 8.31 Filaggrin-2 2.30 15 4 139.19 1.76 11 3 60.14 0.50 2 1 73.60 1.05 2 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High RLDFTEFLLmIFK IPI:IPI00397801.4 1 1 CID M10(Oxidation) 30.35 4.40 1.00 1 3 563.64136 1688.90952 0.83 54.97 6272 6272 MS2 21/48 Linfeng_091811_SIN3A_10.raw High FSNSSSSNEFSK 1 0 CID 57.14 4.40 1.00 1 2 660.78729 1320.56731 -2.26 20.47 1972 1972 MS2 17/22 Linfeng_091611_rIgG_1.raw High HQEEESETEEDEEDTPGHK IPI:IPI00397801.4 1 1 CID 37.52 4.34 1.00 1 3 752.30133 2254.88944 1.73 16.47 2023 2023 MS2 21/72 Linfeng_081211_IgG_8.raw High FSNSSSSNEFSK 1 0 CID 66.80 4.19 1.00 1 2 660.78839 1320.56951 -0.59 20.52 2044 2044 MS2 16/22 Linfeng_091611_rIgG_7.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 56.85 4.17 1.00 1 2 660.78772 1320.56816 -1.61 21.69 3318 3318 MS2 17/22 Linfeng_081211_IgG_5.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 55.66 4.13 1.00 1 2 660.78717 1320.56706 -2.44 20.71 2087 2087 MS2 17/22 Linfeng_091811_SIN3A_3.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 56.72 4.04 1.00 1 2 660.78943 1320.57158 0.98 22.68 3555 3555 MS2 17/22 Linfeng_081211_IgG_2.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 65.46 4.00 1.00 1 2 660.78851 1320.56975 -0.41 22.44 3762 3762 MS2 16/22 Linfeng_081211_IgG_3.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 71.28 3.91 1.00 1 2 660.78827 1320.56926 -0.78 21.53 3352 3352 MS2 17/22 Linfeng_081211_IgG_4.raw High SVVTVIDVFYK IPI:IPI00397801.4 1 1 CID 38.47 3.71 1.00 1 2 635.35919 1269.71111 1.69 43.15 10424 10424 MS2 15/20 Linfeng_081211_IgG_10.raw High SVVTVIDVFYK IPI:IPI00397801.4 1 1 CID 74.04 3.60 1.00 1 2 635.35754 1269.70781 -0.91 43.32 10083 10083 MS2 16/20 Linfeng_081211_IgG_5.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 62.71 3.60 1.00 1 2 660.78802 1320.56877 -1.15 21.17 3483 3483 MS2 17/22 Linfeng_081211_IgG_8.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 59.38 3.59 1.00 1 2 660.78949 1320.57170 1.07 21.63 3183 3183 MS2 15/22 Linfeng_081211_IgG_9.raw High FSNSSSSNEFSK IPI:IPI00397801.4 1 1 CID 56.94 3.48 1.00 1 2 660.78949 1320.57170 1.07 21.78 3455 3455 MS2 14/22 Linfeng_081211_IgG_7.raw High SVVTVIDVFYK IPI:IPI00397801.4 1 1 CID 50.14 3.47 1.00 1 2 635.35962 1269.71196 2.36 43.72 10676 10676 MS2 14/20 Linfeng_081211_IgG_7.raw IPI:IPI00414676.6 724 83.2 5.03 Heat shock protein HSP 90-beta 14.64 14 8 144.65 12.02 11 7 65.76 6.63 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NPDDITQEEYGEFYK IPI:IPI00414676.6 1 1 CID 134.31 5.84 1.00 1 2 924.40137 1847.79546 -0.87 34.72 8034 8034 MS2 23/28 Linfeng_081211_IgG_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 78.45 5.26 1.00 1 2 757.39581 1513.78435 -0.92 36.67 8719 8719 MS2 22/26 Linfeng_081211_IgG_3.raw High NPDDITQEEYGEFYK IPI:IPI00414676.6 1 1 CID 107.73 5.10 1.00 1 2 924.40027 1847.79326 -2.06 33.97 3900 3900 MS2 21/28 Linfeng_091811_SIN3A_3.raw High YHTSQSGDEmTSLSEYVSR IPI:IPI00414676.6 4 1 CID M10(Oxidation) 97.26 4.94 1.00 1 3 731.64954 2192.93406 -2.77 27.90 3090 3090 MS2 26/72 Linfeng_091811_SIN3A_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6 7 1 CID 69.88 4.72 1.00 1 2 757.39117 1513.77507 -7.05 35.75 4134 4134 MS2 21/26 Linfeng_091811_SIN3A_3.raw High GVVDSEDLPLNISR IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 70.30 4.68 1.00 1 2 757.39648 1513.78569 -0.03 36.13 8201 8201 MS2 19/26 Linfeng_081211_IgG_6.raw High NPDDITQEEYGEFYK IPI:IPI00414676.6 1 1 CID 66.73 4.29 1.00 1 3 616.60345 1847.79581 -0.68 34.78 8058 8058 MS2 22/56 Linfeng_081211_IgG_3.raw High TLTLVDTGIGmTK IPI:IPI00414676.6 2 1 CID M11(Oxidation) 61.25 4.06 1.00 1 2 683.36670 1365.72612 -2.45 33.80 7686 7686 MS2 17/24 Linfeng_081211_IgG_3.raw High TLTLVDTGIGmTK IPI:IPI00414676.6 2 1 CID M11(Oxidation) 49.56 4.01 1.00 1 2 683.36780 1365.72832 -0.84 33.81 7401 7401 MS2 17/24 Linfeng_081211_IgG_7.raw High ELISNASDALDK IPI:IPI00027230.3;IPI:IPI00414676.6 4 2 CID 49.34 3.75 1.00 1 2 638.32483 1275.64238 -0.29 29.84 5998 5998 MS2 18/22 Linfeng_081211_IgG_7.raw High ELISNASDALDK IPI:IPI00027230.3;IPI:IPI00414676.6 4 2 CID 29.40 3.72 1.00 1 2 638.32489 1275.64250 -0.19 29.60 5986 5986 MS2 14/22 Linfeng_081211_IgG_10.raw High EQVANSAFVER IPI:IPI00414676.6 3 1 CID 36.87 3.64 1.00 1 2 625.31122 1249.61516 -1.63 26.36 5111 5111 MS2 13/20 Linfeng_081211_IgG_3.raw High ADLINNLGTIAK IPI:IPI00414676.6;IPI:IPI00784295.2 7 2 CID 30.56 3.64 1.00 1 2 621.85516 1242.70305 -1.80 35.39 7910 7910 MS2 17/22 Linfeng_081211_IgG_10.raw High EDQTEYLEER IPI:IPI00414676.6;IPI:IPI00784295.2 6 2 CID 44.86 3.59 1.00 1 2 656.28766 1311.56804 -1.46 26.78 5240 5240 MS2 14/18 Linfeng_081211_IgG_3.raw IPI:IPI00797452.2 474 51.7 6.81 "cDNA FLJ55805, highly similar to Keratin, type II cytoskeletal 4" 11.18 113 5 218.76 11.18 11 5 484.29 2.32 59 1 346.34 2.32 43 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LALDIEIATYR 18 0 CID 74.39 4.64 1.00 2 2 639.35675 1277.70622 -2.98 43.24 5095 5095 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 76.51 4.57 1.00 2 2 639.35730 1277.70732 -2.12 40.03 4545 4545 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 79.48 4.54 1.00 2 2 639.35760 1277.70793 -1.64 41.13 4452 4452 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 67.98 4.53 1.00 2 2 639.35693 1277.70659 -2.69 42.13 4953 4953 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 49.93 4.52 1.00 2 2 639.35950 1277.71172 1.32 47.80 5672 5672 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 68.12 4.51 1.00 2 2 639.35614 1277.70500 -3.93 41.03 4901 4901 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 73.22 4.50 1.00 2 2 639.35693 1277.70659 -2.69 40.41 4641 4641 MS2 18/20 Linfeng_091811_SIN3A_9.raw High LALDIEIATYR 18 0 CID 72.43 4.48 1.00 2 2 639.35718 1277.70708 -2.31 40.09 4321 4321 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 70.38 4.48 1.00 2 2 639.35736 1277.70745 -2.02 41.35 4664 4664 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 55.08 4.46 1.00 2 2 639.35828 1277.70928 -0.59 50.87 5918 5918 MS2 15/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.36 4.45 1.00 2 2 639.35791 1277.70854 -1.16 40.26 9340 9340 MS2 18/20 Linfeng_081211_IgG_4.raw High LALDIEIATYR 18 0 CID 77.19 4.45 1.00 2 2 639.35785 1277.70842 -1.26 42.32 4847 4847 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 58.29 4.45 1.00 2 2 639.35858 1277.70989 -0.11 48.83 5662 5662 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 60.43 4.44 1.00 2 2 639.35699 1277.70671 -2.60 41.28 4866 4866 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 61.07 4.44 1.00 2 2 639.35687 1277.70647 -2.79 47.51 5532 5532 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.30 4.44 1.00 2 2 639.35767 1277.70806 -1.55 40.08 4640 4640 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.17 4.44 1.00 2 2 639.35913 1277.71099 0.75 40.34 9594 9594 MS2 17/20 Linfeng_081211_IgG_7.raw High LALDIEIATYR 18 0 CID 72.54 4.43 1.00 2 2 639.35645 1277.70561 -3.46 40.34 4730 4730 MS2 18/20 Linfeng_091811_SIN3A_6.raw High LALDIEIATYR 18 0 CID 71.04 4.42 1.00 2 2 639.35693 1277.70659 -2.69 41.11 4822 4822 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.66 4.42 1.00 2 2 639.35608 1277.70488 -4.03 40.29 4529 4529 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 73.64 4.42 1.00 2 2 639.35596 1277.70464 -4.22 41.11 4715 4715 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 69.41 4.39 1.00 2 2 639.35724 1277.70720 -2.22 40.09 4697 4697 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 51.08 4.39 1.00 2 2 639.35730 1277.70732 -2.12 46.84 5415 5415 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 71.25 4.39 1.00 2 2 639.35730 1277.70732 -2.12 40.26 4734 4734 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 79.65 4.38 1.00 2 2 639.35754 1277.70781 -1.74 41.27 4714 4714 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 59.23 4.38 1.00 2 2 639.35748 1277.70769 -1.83 43.35 4979 4979 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 73.29 4.38 1.00 2 2 639.35663 1277.70598 -3.17 39.89 4132 4132 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 77.06 4.38 1.00 2 2 639.35663 1277.70598 -3.17 40.43 4592 4592 MS2 18/20 Linfeng_091811_SIN3A_8.raw High LALDIEIATYR 18 0 CID 65.38 4.37 1.00 2 2 639.35651 1277.70574 -3.36 40.11 4694 4694 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 74.05 4.37 1.00 2 2 639.35608 1277.70488 -4.03 41.10 4286 4286 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 78.75 4.37 1.00 2 2 639.35675 1277.70622 -2.98 40.12 4662 4662 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.04 4.36 1.00 2 2 639.35779 1277.70830 -1.36 45.45 5463 5463 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 76.07 4.36 1.00 2 2 639.35681 1277.70635 -2.88 39.96 4760 4760 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 75.43 4.36 1.00 2 2 639.35663 1277.70598 -3.17 45.36 5361 5361 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 60.74 4.36 1.00 2 2 639.35657 1277.70586 -3.27 42.75 5002 5002 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 56.40 4.35 1.00 2 2 639.35767 1277.70806 -1.55 49.16 5733 5733 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 67.31 4.35 1.00 2 2 639.35657 1277.70586 -3.27 40.36 4515 4515 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 56.99 4.35 1.00 2 2 639.35773 1277.70818 -1.45 50.07 5785 5785 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 65.43 4.35 1.00 2 2 639.35699 1277.70671 -2.60 43.36 5114 5114 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 58.16 4.35 1.00 2 2 639.35730 1277.70732 -2.12 40.18 4732 4732 MS2 18/20 Linfeng_091611_rIgG_6.raw High LALDIEIATYR 18 0 CID 71.18 4.34 1.00 2 2 639.35651 1277.70574 -3.36 41.19 4801 4801 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 49.21 4.34 1.00 2 2 639.35986 1277.71245 1.89 54.39 6420 6420 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 59.05 4.34 1.00 2 2 639.35736 1277.70745 -2.02 40.08 4863 4863 MS2 18/20 Linfeng_091611_rIgG_8.raw High LALDIEIATYR 18 0 CID 55.20 4.34 1.00 2 2 639.35870 1277.71013 0.08 55.48 6559 6559 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 61.60 4.33 1.00 2 2 639.35638 1277.70549 -3.55 40.02 4574 4574 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.92 4.32 1.00 2 2 639.35590 1277.70452 -4.32 41.56 4668 4668 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 66.07 4.32 1.00 2 2 639.35980 1277.71233 1.80 54.48 5929 5929 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.17 4.31 1.00 2 2 639.35968 1277.71208 1.61 54.36 6260 6260 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 59.60 4.31 1.00 2 2 639.35803 1277.70879 -0.97 41.21 4786 4786 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR 18 0 CID 60.55 4.30 1.00 2 2 639.35754 1277.70781 -1.74 46.40 5492 5492 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 69.47 4.29 1.00 2 2 639.35681 1277.70635 -2.88 40.13 4735 4735 MS2 18/20 Linfeng_091611_rIgG_5.raw High LALDIEIATYR 18 0 CID 59.26 4.28 1.00 2 2 639.35791 1277.70854 -1.16 55.00 6451 6451 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 53.03 4.28 1.00 2 2 639.35669 1277.70610 -3.08 45.08 5331 5331 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 77.31 4.28 1.00 2 2 639.35699 1277.70671 -2.60 41.07 4677 4677 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 48.36 4.27 1.00 2 2 639.35736 1277.70745 -2.02 57.72 6821 6821 MS2 15/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.62 4.27 1.00 2 2 639.35754 1277.70781 -1.74 50.20 5426 5426 MS2 15/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.23 4.26 1.00 2 2 639.35779 1277.70830 -1.36 42.61 4875 4875 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.87 4.25 1.00 2 2 639.35852 1277.70976 -0.21 56.53 6145 6145 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.26 4.25 1.00 2 2 639.35773 1277.70818 -1.45 56.99 6644 6644 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 63.44 4.24 1.00 2 2 639.35791 1277.70854 -1.16 57.20 6548 6548 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 80.54 4.24 1.00 2 2 639.35883 1277.71037 0.27 53.92 6249 6249 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 65.19 4.24 1.00 2 2 639.35760 1277.70793 -1.64 45.30 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 62.40 4.24 1.00 2 2 639.35944 1277.71160 1.22 47.04 5431 5431 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 55.71 4.23 1.00 2 2 639.35876 1277.71025 0.17 53.30 6162 6162 MS2 17/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 52.12 4.23 1.00 2 2 639.35699 1277.70671 -2.60 58.44 7078 7078 MS2 16/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 44.05 4.23 1.00 2 2 639.35828 1277.70928 -0.59 50.81 6046 6046 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 40.37 4.23 1.00 2 2 639.35785 1277.70842 -1.26 46.96 5535 5535 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 31.44 4.22 1.00 2 2 639.35651 1277.70574 -3.36 44.25 5222 5222 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 64.31 4.22 1.00 2 2 639.35675 1277.70622 -2.98 46.01 4908 4908 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 63.92 4.22 1.00 2 2 639.35681 1277.70635 -2.88 42.34 4984 4984 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 73.74 4.22 1.00 2 2 639.35693 1277.70659 -2.69 44.58 4727 4727 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.53 4.21 1.00 2 2 639.35724 1277.70720 -2.22 54.73 6304 6304 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 81.93 4.21 1.00 2 2 639.35645 1277.70561 -3.46 42.51 4466 4466 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 76.91 4.21 1.00 2 2 639.35736 1277.70745 -2.02 40.28 4886 4886 MS2 18/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 74.05 4.21 1.00 2 2 639.35632 1277.70537 -3.65 42.42 4886 4886 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.76 4.20 1.00 2 2 639.35785 1277.70842 -1.26 51.80 6160 6160 MS2 16/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 63.73 4.20 1.00 2 2 639.35846 1277.70964 -0.30 47.82 5536 5536 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 54.51 4.18 1.00 2 2 639.35699 1277.70671 -2.60 41.23 4842 4842 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.60 4.18 1.00 2 2 639.35822 1277.70915 -0.69 45.71 5263 5263 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 72.51 4.17 1.00 2 2 639.35864 1277.71001 -0.02 45.63 5263 5263 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 77.88 4.17 1.00 2 2 639.35797 1277.70867 -1.07 40.14 9229 9229 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 51.47 4.17 1.00 2 2 639.35846 1277.70964 -0.30 51.21 5551 5551 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.44 4.16 1.00 2 2 639.35907 1277.71086 0.65 53.41 5818 5818 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.78 4.16 1.00 2 2 639.35858 1277.70989 -0.11 51.02 6045 6045 MS2 16/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.75 4.16 1.00 2 2 639.35803 1277.70879 -0.97 51.16 5918 5918 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.19 4.15 1.00 2 2 639.35748 1277.70769 -1.83 49.79 5916 5916 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 56.10 4.15 1.00 2 2 639.35889 1277.71050 0.36 50.84 6048 6048 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 70.88 4.15 1.00 2 2 639.35748 1277.70769 -1.83 47.71 5656 5656 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 55.55 4.15 1.00 2 2 639.35938 1277.71147 1.13 51.67 6046 6046 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 64.79 4.14 1.00 2 2 639.35864 1277.71001 -0.02 53.71 6297 6297 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.36 4.14 1.00 2 2 639.35663 1277.70598 -3.17 58.99 6872 6872 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 48.16 4.13 1.00 2 2 639.35895 1277.71062 0.46 53.39 6431 6431 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.88 4.13 1.00 2 2 639.35950 1277.71172 1.32 53.89 6378 6378 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.97 4.12 1.00 2 2 639.35754 1277.70781 -1.74 40.23 4581 4581 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 45.33 4.12 1.00 2 2 639.35718 1277.70708 -2.31 48.76 5787 5787 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 66.71 4.12 1.00 2 2 639.35931 1277.71135 1.03 54.32 6396 6396 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.76 4.12 1.00 2 2 639.35718 1277.70708 -2.31 47.57 5724 5724 MS2 16/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 60.61 4.11 1.00 2 2 639.35712 1277.70696 -2.41 52.88 6281 6281 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 65.97 4.10 1.00 2 2 639.35687 1277.70647 -2.79 42.36 5006 5006 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 51.06 4.10 1.00 2 2 639.35791 1277.70854 -1.16 56.60 6731 6731 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 49.83 4.10 1.00 2 2 639.35999 1277.71269 2.08 54.43 6527 6527 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 80.27 4.09 1.00 2 2 639.35779 1277.70830 -1.36 50.66 5920 5920 MS2 17/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 60.93 4.09 1.00 2 2 639.35925 1277.71123 0.94 55.49 6056 6056 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 47.53 4.08 1.00 2 2 639.36035 1277.71343 2.66 55.17 6383 6383 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 64.57 4.07 1.00 2 2 639.35559 1277.70391 -4.79 45.11 5232 5232 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 52.55 4.06 1.00 2 2 639.35870 1277.71013 0.08 40.31 9658 9658 MS2 14/20 Linfeng_081211_IgG_8.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 34.23 4.01 1.00 2 2 639.35919 1277.71111 0.84 41.29 9835 9835 MS2 15/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 54.99 3.99 1.00 2 2 639.36005 1277.71282 2.18 40.23 9494 9494 MS2 14/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 59.78 3.98 1.00 2 2 639.35870 1277.71013 0.08 41.43 10337 10337 MS2 15/20 Linfeng_081211_IgG_3.raw High AEAEALYQTK IPI:IPI00329306.3;IPI:IPI00477227.3;IPI:IPI00797452.2;IPI:IPI00942512.1 11 4 CID 57.82 3.76 1.00 1 2 562.28387 1123.56047 -2.27 24.63 4520 4520 MS2 15/18 Linfeng_081211_IgG_3.raw High VDSLNDEINFLK IPI:IPI00797452.2 2 1 CID 53.82 3.67 1.00 1 2 703.86218 1406.71709 0.60 39.50 9109 9109 MS2 13/22 Linfeng_081211_IgG_4.raw High TAAENDFVVLK IPI:IPI00797452.2 2 1 CID 34.85 3.56 1.00 1 2 603.82117 1206.63506 -1.23 33.81 7689 7689 MS2 15/20 Linfeng_081211_IgG_3.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw IPI:IPI00893179.1 557 64.0 6.83 X-ray repair complementing defective repair in Chinese hamster cells 6 31.78 21 12 144.86 23.34 11 9 95.60 14.90 7 5 65.59 8.08 3 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NLEALALDLMEPEQAVDLTLPK IPI:IPI00893179.1 4 1 CID 139.17 7.18 1.00 1 3 808.42926 2423.27323 -0.29 53.95 6485 6485 MS2 35/84 Linfeng_091611_rIgG_4.raw High NLEALALDLmEPEQAVDLTLPK IPI:IPI00893179.1 4 1 CID M10(Oxidation) 128.19 6.55 1.00 1 3 813.75977 2439.26474 -1.69 48.61 5855 5855 MS2 34/84 Linfeng_091611_rIgG_4.raw High TEGDEEAEEEQEENLEASGDYK IPI:IPI00893179.1 3 1 CID 159.55 6.28 1.00 1 3 834.33624 2500.99417 -0.69 28.23 5458 5458 MS2 31/84 Linfeng_081211_IgG_4.raw High IQVTPPGFQLVFLPFADDK IPI:IPI00893179.1 4 1 CID 65.55 5.76 1.00 1 3 711.38513 2132.14084 -0.90 52.45 6327 6327 MS2 33/72 Linfeng_091611_rIgG_4.raw High TEGDEEAEEEQEENLEASGDYK IPI:IPI00893179.1 3 1 CID 93.78 5.36 1.00 1 2 1251.00000 2500.99272 -1.27 28.27 5473 5473 MS2 19/42 Linfeng_081211_IgG_4.raw High IISSDRDLLAVVFYGTEK IPI:IPI00893179.1 3 1 CID 53.03 5.29 1.00 1 3 676.03204 2026.08158 -2.00 44.67 5305 5305 MS2 25/68 Linfeng_091811_SIN3A_4.raw High NIYVLQELDNPGAK IPI:IPI00893179.1 3 1 CID 70.96 5.19 1.00 1 2 787.41498 1573.82268 0.36 38.23 8709 8709 MS2 19/26 Linfeng_081211_IgG_4.raw High NIYVLQELDNPGAK IPI:IPI00893179.1 3 1 CID 61.47 4.99 1.00 1 2 787.41071 1573.81413 -5.07 37.97 4501 4501 MS2 18/26 Linfeng_091611_rIgG_4.raw High TFNTSTGGLLLPSDTK IPI:IPI00893179.1 4 1 CID 90.51 4.83 1.00 1 2 826.42743 1651.84758 -3.77 34.80 4086 4086 MS2 19/30 Linfeng_091611_rIgG_4.raw High DLLAVVFYGTEK IPI:IPI00893179.1 3 1 CID 60.24 4.72 1.00 1 2 677.86505 1354.72283 -1.86 48.05 5785 5785 MS2 19/22 Linfeng_091611_rIgG_4.raw High NIYVLQELDNPGAK IPI:IPI00893179.1 3 1 CID 39.40 4.56 1.00 1 3 525.27673 1573.81565 -4.11 37.89 4491 4491 MS2 28/52 Linfeng_091611_rIgG_4.raw High TFNTSTGGLLLPSDTK IPI:IPI00893179.1 4 1 CID 56.44 4.53 1.00 1 2 826.42999 1651.85271 -0.67 35.14 7746 7746 MS2 20/30 Linfeng_081211_IgG_4.raw High DSLIFLVDASK IPI:IPI00893179.1 3 1 CID 56.41 4.36 1.00 1 2 604.33044 1207.65361 -2.76 42.34 5004 5004 MS2 17/20 Linfeng_091811_SIN3A_4.raw High TFNTSTGGLLLPSDTK IPI:IPI00893179.1 4 1 CID 4.81 4.30 1.00 1 2 826.42737 1651.84746 -3.85 35.25 4088 4088 MS2 12/30 Linfeng_091811_SIN3A_4.raw High ImLFTNEDNPHGNDSAK IPI:IPI00893179.1 4 1 CID M2(Oxidation) 33.56 4.27 1.00 1 3 640.29114 1918.85886 -0.62 28.43 5517 5517 MS2 25/64 Linfeng_081211_IgG_4.raw High SDSFENPVLQQHFR IPI:IPI00893179.1 4 1 CID 48.74 4.21 1.00 1 2 852.40997 1703.81267 -0.59 32.78 6998 6998 MS2 18/26 Linfeng_081211_IgG_4.raw High DIISIAEDEDLR IPI:IPI00893179.1 4 1 CID 51.04 4.10 1.00 1 2 694.84900 1388.69072 0.20 39.24 9023 9023 MS2 19/22 Linfeng_081211_IgG_4.raw High DLLAVVFYGTEK IPI:IPI00893179.1 3 1 CID 38.23 3.79 1.00 1 2 677.86670 1354.72612 0.57 47.90 10971 10971 MS2 15/22 Linfeng_081211_IgG_4.raw High KPGGFDISLFYR IPI:IPI00893179.1 4 1 CID 39.35 3.62 1.00 1 2 700.37115 1399.73503 -1.35 39.54 9123 9123 MS2 17/22 Linfeng_081211_IgG_4.raw High DSLIFLVDASK IPI:IPI00893179.1 3 1 CID 48.30 3.61 1.00 1 2 604.33191 1207.65654 -0.33 42.18 9874 9874 MS2 17/20 Linfeng_081211_IgG_4.raw High DSLIFLVDASK IPI:IPI00893179.1 3 1 CID 20.61 3.61 1.00 1 2 604.33392 1207.66057 3.00 41.96 10054 10054 MS2 13/20 Linfeng_081211_IgG_10.raw IPI:IPI00026970.4 1047 119.8 5.66 FACT complex subunit SPT16 18.34 21 12 168.78 10.32 12 8 96.02 9.93 5 5 121.92 5.54 4 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TYALFIGDTVLVDEDGPATVLTSVK IPI:IPI00026970.4 1 1 CID 38.54 6.56 1.00 1 3 875.45850 2624.36094 -3.71 49.11 5289 5289 MS2 24/96 Linfeng_091611_rIgG_3.raw High TLmVDPSQEVQENYNFLLQLQEELLK IPI:IPI00026970.4 1 1 CID M3(Oxidation) 300.00 6.36 1.00 1 3 1046.52930 3137.57334 0.67 54.85 6478 6478 MS2 42/100 Linfeng_091811_SIN3A_2.raw High HTDVQFYTEVGEITTDLGK IPI:IPI00026970.4 1 1 CID 84.21 6.20 1.00 1 3 718.34979 2153.03482 -2.30 41.02 4275 4275 MS2 32/72 Linfeng_091611_rIgG_3.raw High TLmVDPSQEVQENYNFLLQLQEELLK IPI:IPI00026970.4 1 1 CID M3(Oxidation) 135.04 6.18 1.00 1 3 1046.53003 3137.57553 1.37 54.80 5969 5969 MS2 43/100 Linfeng_091611_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR IPI:IPI00026970.4 1 1 CID 114.81 5.27 1.00 1 3 803.00000 2406.98545 -2.08 33.58 3330 3330 MS2 33/76 Linfeng_091611_rIgG_3.raw High APGEQTVPALNLQNAFR IPI:IPI00026970.4 1 1 CID 63.13 5.19 1.00 1 3 609.32367 1825.95646 0.46 40.20 9911 9911 MS2 24/64 Linfeng_081211_IgG_3.raw High NEDEEEEEEEKDEAEDLLGR IPI:IPI00026970.4 1 1 CID 148.75 5.05 1.00 1 3 802.99927 2406.98325 -2.99 33.85 3843 3843 MS2 37/76 Linfeng_091811_SIN3A_2.raw High NEDEEEEEEEKDEAEDLLGR IPI:IPI00026970.4 1 1 CID 145.74 4.74 1.00 1 3 802.99951 2406.98398 -2.68 33.83 3883 3883 MS2 34/76 Linfeng_091811_SIN3A_3.raw High YTEGVQSLNWTK IPI:IPI00026970.4 2 1 CID 77.92 4.55 1.00 1 2 713.35114 1425.69499 -4.15 31.96 3594 3594 MS2 20/22 Linfeng_091811_SIN3A_2.raw High YTEGVQSLNWTK IPI:IPI00026970.4 2 1 CID 67.59 4.44 1.00 1 2 713.35382 1425.70036 -0.38 33.76 6836 6836 MS2 18/22 Linfeng_081211_IgG_2.raw High NISmSVEGDYTYLR IPI:IPI00026970.4 1 1 CID M4(Oxidation) 88.80 4.34 1.00 1 2 832.38336 1663.75945 -2.30 33.06 3265 3265 MS2 18/26 Linfeng_091611_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR IPI:IPI00026970.4 1 1 CID 104.01 4.32 1.00 1 3 803.00055 2406.98709 -1.39 34.72 8037 8037 MS2 25/76 Linfeng_081211_IgG_3.raw High NEGNIFPNPEATFVK IPI:IPI00026970.4 1 1 CID 34.39 4.31 1.00 1 2 838.91602 1676.82475 -1.90 38.86 9476 9476 MS2 16/28 Linfeng_081211_IgG_3.raw High NEGNIFPNPEATFVK IPI:IPI00026970.4 1 1 CID 50.68 4.05 1.00 1 2 838.91907 1676.83086 1.74 38.92 8323 8323 MS2 13/28 Linfeng_081211_IgG_2.raw High AASITSEVFNK IPI:IPI00026970.4 1 1 CID 48.17 3.62 1.00 1 2 583.80627 1166.60527 0.04 31.78 6925 6925 MS2 16/20 Linfeng_081211_IgG_3.raw High APGEQTVPALNLQNAFR IPI:IPI00026970.4 1 1 CID 60.42 3.61 1.00 1 2 913.48120 1825.95513 -0.27 40.10 9876 9876 MS2 15/32 Linfeng_081211_IgG_3.raw High INFYcPGSALGR IPI:IPI00026970.4 1 1 CID C5(Carbamidomethyl) 108.29 3.55 1.00 1 2 677.83209 1354.65691 -0.28 36.42 7571 7571 MS2 17/22 Linfeng_081211_IgG_2.raw High YTEGVQSLNWTK IPI:IPI00026970.4 2 1 CID 1.00 3.53 1.00 1 2 713.35974 1425.71221 7.92 32.57 6954 6954 MS2 10/22 Linfeng_081211_IgG_7.raw High ELAAQLNEEAK IPI:IPI00026970.4 1 1 CID 46.18 3.50 1.00 1 2 608.31317 1215.61907 -2.10 26.34 5106 5106 MS2 16/20 Linfeng_081211_IgG_3.raw High DLGFNGAPYR IPI:IPI00026970.4 1 1 CID 35.15 3.49 1.00 1 2 555.27167 1109.53606 -1.28 33.19 6687 6687 MS2 15/18 Linfeng_081211_IgG_2.raw High AASITSEVFNK IPI:IPI00026970.4 1 1 CID 41.66 3.48 1.00 1 2 583.80597 1166.60466 -0.49 32.23 6395 6395 MS2 16/20 Linfeng_081211_IgG_2.raw IPI:IPI00027547.2 110 11.3 6.54 Dermcidin 22.73 13 3 80.90 22.73 12 3 32.63 12.73 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGKDAVEDLESVGK 2 0 CID 25.49 5.51 1.00 1 3 487.25827 1459.76026 -2.53 31.37 3437 3437 MS2 25/52 Linfeng_091611_rIgG_9.raw High LGKDAVEDLESVGK IPI:IPI00027547.2 2 1 CID 43.72 4.57 1.00 1 3 487.25952 1459.76401 0.04 31.68 6674 6674 MS2 24/52 Linfeng_081211_IgG_10.raw High LGKDAVEDLESVGK IPI:IPI00027547.2 2 1 CID 33.62 4.27 1.00 1 3 487.25949 1459.76392 -0.02 32.04 6743 6743 MS2 25/52 Linfeng_081211_IgG_4.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 43.23 3.99 1.00 1 2 581.28479 1161.56230 -0.98 32.90 7293 7293 MS2 17/20 Linfeng_081211_IgG_8.raw High LGKDAVEDLESVGK IPI:IPI00027547.2 2 1 CID 88.31 3.92 1.00 1 2 730.38586 1459.76445 0.34 31.75 6699 6699 MS2 18/26 Linfeng_081211_IgG_10.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 25.38 3.89 1.00 1 2 581.28473 1161.56218 -1.08 34.00 6904 6904 MS2 16/20 Linfeng_081211_IgG_2.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 67.11 3.87 1.00 1 2 581.28424 1161.56120 -1.93 37.75 5593 5593 MS2 17/20 Linfeng_081211_IgG_1.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 39.27 3.84 1.00 1 2 581.28406 1161.56084 -2.24 33.07 7157 7157 MS2 17/20 Linfeng_081211_IgG_6.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 43.90 3.80 1.00 1 2 581.28528 1161.56328 -0.14 32.98 7052 7052 MS2 17/20 Linfeng_081211_IgG_10.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 15.55 3.80 1.00 1 2 581.28455 1161.56182 -1.40 33.35 7241 7241 MS2 17/20 Linfeng_081211_IgG_7.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 44.55 3.72 1.00 1 2 581.28461 1161.56194 -1.29 33.16 7117 7117 MS2 17/20 Linfeng_081211_IgG_4.raw High DAVEDLESVGK IPI:IPI00027547.2 2 1 CID 31.39 3.64 1.00 1 2 581.28497 1161.56267 -0.66 33.31 7107 7107 MS2 16/20 Linfeng_081211_IgG_5.raw High ENAGEDPGLAR IPI:IPI00027547.2 2 1 CID 42.50 3.48 1.00 1 2 564.76727 1128.52727 -0.70 20.16 3148 3148 MS2 16/20 Linfeng_081211_IgG_6.raw IPI:IPI00402182.2 588 65.6 8.60 Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q 21.94 20 10 202.01 17.18 12 8 98.32 4.76 4 2 101.65 4.76 4 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EFNEDGALAVLQQFK 6 0 CID 39.14 5.83 1.00 1 2 854.92889 1708.85051 -2.14 45.36 5451 5451 MS2 18/28 Linfeng_091611_rIgG_4.raw High EFNEDGALAVLQQFK 6 0 CID 53.92 5.52 1.00 1 3 570.28802 1708.84952 -2.72 45.32 5446 5446 MS2 27/56 Linfeng_091611_rIgG_4.raw High EFNEDGALAVLQQFK IPI:IPI00966060.1 6 1 CID 28.83 5.35 1.00 1 3 570.28925 1708.85318 -0.57 45.52 5418 5418 MS2 27/56 Linfeng_091811_SIN3A_4.raw High SENQEFYQDTFGQQWK IPI:IPI00402182.2 2 1 CID 79.45 5.04 1.00 1 2 1017.94434 2034.88140 -0.73 36.81 8229 8229 MS2 21/30 Linfeng_081211_IgG_4.raw High EFNEDGALAVLQQFK IPI:IPI00966060.1 6 1 CID 72.95 4.91 1.00 1 2 854.92993 1708.85259 -0.92 45.57 5425 5425 MS2 19/28 Linfeng_091811_SIN3A_4.raw High NLANTVTEEILEK IPI:IPI00402182.2 7 1 CID 60.04 4.80 1.00 1 2 737.39478 1473.78227 1.83 40.20 9321 9321 MS2 20/24 Linfeng_081211_IgG_4.raw High DLFEDELVPLFEK 7 0 CID 58.39 4.73 1.00 1 2 797.40411 1593.80095 -2.38 50.61 6105 6105 MS2 19/24 Linfeng_091611_rIgG_4.raw High EFNEDGALAVLQQFK IPI:IPI00966060.1 6 1 CID 34.10 4.59 1.00 1 3 570.28796 1708.84934 -2.82 45.68 5404 5404 MS2 24/56 Linfeng_091811_SIN3A_6.raw High NLANTVTEEILEK IPI:IPI00402182.2 7 1 CID 57.47 4.39 1.00 1 2 737.39313 1473.77898 -0.41 40.13 9228 9228 MS2 20/24 Linfeng_081211_IgG_5.raw High DLFEDELVPLFEK 7 0 CID 61.77 4.21 1.00 1 2 797.40521 1593.80315 -1.01 50.81 6062 6062 MS2 18/24 Linfeng_091611_rIgG_6.raw High DLFEDELVPLFEK IPI:IPI00966060.1 7 1 CID 68.41 4.09 1.00 1 2 797.40588 1593.80449 -0.16 50.95 6036 6036 MS2 18/24 Linfeng_091811_SIN3A_4.raw High VTEGLTDVILYHQPDDK IPI:IPI00402182.2 7 1 CID 70.03 4.04 1.00 1 2 971.98993 1942.97258 -1.62 35.66 7894 7894 MS2 15/32 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 51.85 3.97 1.00 1 2 656.32990 1311.65251 -1.10 28.84 5663 5663 MS2 17/22 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 64.18 3.79 1.00 1 2 656.32916 1311.65105 -2.22 29.80 6194 6194 MS2 17/22 Linfeng_081211_IgG_3.raw High GFcFLEYEDHK IPI:IPI00012074.3;IPI:IPI00402182.2 13 2 CID C3(Carbamidomethyl) 59.25 3.72 1.00 1 2 722.81451 1444.62175 1.06 35.50 7856 7856 MS2 16/20 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 45.25 3.65 1.00 1 2 656.32983 1311.65239 -1.20 28.60 5759 5759 MS2 16/22 Linfeng_081211_IgG_8.raw High GYAFVTFcTK IPI:IPI00402182.2 7 1 CID C8(Carbamidomethyl) 55.40 3.64 1.00 1 2 597.28552 1193.56377 -1.87 36.09 8006 8006 MS2 15/18 Linfeng_081211_IgG_4.raw High TKEQILEEFSK IPI:IPI00402182.2 7 1 CID 49.42 3.63 1.00 1 2 676.35956 1351.71184 1.04 30.78 6327 6327 MS2 16/20 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 30.55 3.57 1.00 1 2 656.33002 1311.65276 -0.92 28.78 5703 5703 MS2 14/22 Linfeng_081211_IgG_6.raw High LmmDPLTGLNR IPI:IPI00402182.2 7 1 CID "M2(Oxidation), M3(Oxidation)" 39.81 3.56 1.00 1 2 646.82153 1292.63579 1.54 30.79 6329 6329 MS2 15/20 Linfeng_081211_IgG_4.raw IPI:IPI00554711.3 745 81.7 6.14 Junction plakoglobin 9.26 13 5 201.77 6.58 12 4 33.35 2.68 1 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LNTIPLFVQLLYSSVENIQR IPI:IPI00554711.3 1 1 CID 77.83 4.85 1.00 1 3 783.10596 2347.30332 0.52 55.27 6531 6531 MS2 24/76 Linfeng_091811_SIN3A_2.raw High LLNDEDPVVVTK IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID 53.67 4.50 1.00 1 2 671.36682 1341.72637 0.20 30.35 6166 6166 MS2 17/22 Linfeng_081211_IgG_4.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 44.22 4.22 1.00 1 2 714.40619 1427.80510 0.78 34.95 7822 7822 MS2 16/26 Linfeng_081211_IgG_7.raw High LLNDEDPVVVTK IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID 68.15 4.14 1.00 1 2 671.36627 1341.72527 -0.61 30.30 6209 6209 MS2 17/22 Linfeng_081211_IgG_6.raw High TmQNTSDLDTAR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M2(Oxidation) 51.77 3.85 1.00 1 2 684.80530 1368.60332 -1.99 18.97 2790 2790 MS2 14/22 Linfeng_081211_IgG_6.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 20.38 3.73 1.00 1 2 714.40503 1427.80278 -0.84 43.73 7279 7279 MS2 15/26 Linfeng_081211_IgG_1.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 52.98 3.70 1.00 1 2 714.40637 1427.80547 1.04 34.81 7631 7631 MS2 18/26 Linfeng_081211_IgG_4.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 50.26 3.70 1.00 1 2 714.40497 1427.80266 -0.93 34.91 7809 7809 MS2 16/26 Linfeng_081211_IgG_6.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 39.79 3.66 1.00 1 2 714.40607 1427.80486 0.61 35.61 8373 8373 MS2 17/26 Linfeng_081211_IgG_3.raw High VSVELTNSLFK IPI:IPI00554711.3 1 1 CID 40.98 3.62 1.00 1 2 618.84576 1236.68425 0.62 46.21 8047 8047 MS2 14/20 Linfeng_081211_IgG_1.raw High VSVELTNSLFK IPI:IPI00554711.3 1 1 CID 42.90 3.58 1.00 1 2 618.84491 1236.68254 -0.76 37.52 8476 8476 MS2 16/20 Linfeng_081211_IgG_4.raw High VSVELTNSLFK IPI:IPI00554711.3 1 1 CID 42.71 3.50 1.00 1 2 618.84460 1236.68193 -1.25 37.61 8676 8676 MS2 13/20 Linfeng_081211_IgG_7.raw High VSVELTNSLFK IPI:IPI00554711.3 1 1 CID 46.83 3.49 1.00 1 2 618.84467 1236.68205 -1.15 37.21 8706 8706 MS2 15/20 Linfeng_081211_IgG_8.raw IPI:IPI00645452.1 426 47.7 4.81 "Tubulin, beta" 31.92 24 9 91.36 18.54 12 6 50.21 13.85 4 4 82.67 23.24 8 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SGPFGQIFRPDNFVFGQSGAGNNWAK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 107.08 5.90 1.00 1 3 933.45209 2798.34171 -0.64 43.94 5367 5367 MS2 31/100 Linfeng_091811_SIN3A_5.raw High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 70.71 5.36 1.00 1 3 629.32684 1885.96598 -3.67 45.83 5608 5608 MS2 31/64 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR 11 0 CID 44.35 5.29 1.00 1 3 653.66309 1958.97470 -3.66 44.42 5287 5287 MS2 25/68 Linfeng_091611_rIgG_5.raw High MAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID 93.34 5.18 1.00 1 3 623.99597 1869.97336 -2.48 47.82 5856 5856 MS2 37/64 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00645452.1 11 1 CID 59.62 5.09 1.00 1 3 653.66589 1958.98313 0.64 45.32 10630 10630 MS2 25/68 Linfeng_081211_IgG_5.raw High NSSYFVEWIPNNVK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 22 3 CID 49.93 4.63 1.00 1 2 848.91589 1696.82451 -5.00 41.12 4998 4998 MS2 13/26 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00908770.1 10 3 CID M6(Oxidation) 46.21 4.63 1.00 1 2 731.84351 1462.67974 -3.13 22.98 2540 2540 MS2 17/22 Linfeng_091811_SIN3A_5.raw High GHYTEGAELVDSVLDVVR IPI:IPI00007752.1;IPI:IPI00647896.1;IPI:IPI00953417.1 11 3 CID 44.89 4.63 1.00 1 3 653.66254 1958.97306 -4.50 44.71 5466 5466 MS2 26/68 Linfeng_091811_SIN3A_5.raw High MAVTFIGNSTAIQELFK 5 0 CID 65.95 4.62 1.00 1 3 623.99622 1869.97409 -2.08 47.47 5666 5666 MS2 35/64 Linfeng_091611_rIgG_5.raw High EVDEQmLNVQNK 10 0 CID M6(Oxidation) 44.12 4.61 1.00 1 2 731.84430 1462.68132 -2.04 22.86 2461 2461 MS2 16/22 Linfeng_091611_rIgG_5.raw High ImNTFSVVPSPK 11 0 CID M2(Oxidation) 31.89 4.37 1.00 1 2 668.35040 1335.69353 -3.17 31.10 3566 3566 MS2 17/22 Linfeng_091611_rIgG_5.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 54.77 4.32 1.00 1 2 731.84503 1462.68279 -1.04 23.71 3954 3954 MS2 17/22 Linfeng_081211_IgG_5.raw High mAVTFIGNSTAIQELFK IPI:IPI00647896.1;IPI:IPI00908770.1;IPI:IPI00953417.1 5 3 CID M1(Oxidation) 48.31 4.28 1.00 1 3 629.32849 1885.97092 -1.05 45.97 5440 5440 MS2 22/64 Linfeng_091811_SIN3A_6.raw High ALTVPELTQQVFDAK IPI:IPI00645452.1 4 1 CID 25.35 4.26 1.00 1 3 553.96838 1659.89060 -2.83 41.97 9743 9743 MS2 20/56 Linfeng_081211_IgG_5.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 67.87 4.26 1.00 1 2 651.32098 1301.63469 -1.96 27.45 5277 5277 MS2 18/22 Linfeng_081211_IgG_6.raw High ImNTFSVVPSPK IPI:IPI00645452.1 11 1 CID M2(Oxidation) 43.01 4.15 1.00 1 2 668.35248 1335.69768 -0.07 31.86 6726 6726 MS2 14/22 Linfeng_081211_IgG_6.raw High ImNTFSVVPSPK IPI:IPI00007752.1;IPI:IPI00647896.1 11 2 CID M2(Oxidation) 30.86 4.15 1.00 1 2 668.34973 1335.69219 -4.18 31.27 3682 3682 MS2 18/22 Linfeng_091811_SIN3A_5.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 37.05 4.14 1.00 1 2 731.84570 1462.68413 -0.12 23.59 4168 4168 MS2 15/22 Linfeng_081211_IgG_10.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 19.56 4.07 1.00 1 2 580.31702 1159.62676 -2.19 33.68 7245 7245 MS2 14/18 Linfeng_081211_IgG_5.raw High ImNTFSVVPSPK IPI:IPI00645452.1 11 1 CID M2(Oxidation) 29.77 4.06 1.00 1 2 668.35144 1335.69560 -1.62 31.76 6536 6536 MS2 15/22 Linfeng_081211_IgG_5.raw High ISVYYNEATGGK IPI:IPI00645452.1 4 1 CID 80.21 3.89 1.00 1 2 651.32062 1301.63396 -2.52 27.67 5110 5110 MS2 16/22 Linfeng_081211_IgG_5.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 21.87 3.81 1.00 1 2 580.31836 1159.62944 0.13 34.04 7496 7496 MS2 15/18 Linfeng_081211_IgG_6.raw High LAVNmVPFPR IPI:IPI00645452.1 29 1 CID M5(Oxidation) 25.63 3.75 1.00 1 2 580.31824 1159.62920 -0.08 33.77 7387 7387 MS2 12/18 Linfeng_081211_IgG_7.raw High EVDEQmLNVQNK IPI:IPI00645452.1 10 1 CID M6(Oxidation) 57.93 3.51 1.00 1 2 731.84473 1462.68218 -1.46 23.42 4158 4158 MS2 14/22 Linfeng_081211_IgG_6.raw IPI:IPI00793641.1 398 44.7 5.20 "cDNA FLJ50908, highly similar to Homo sapiens keratin protein K6irs (K6IRS2), mRNA" 8.04 23 3 172.72 8.04 12 3 157.32 3.02 5 1 107.28 3.02 6 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLEQQNQVLETK 9 0 CID 61.23 5.57 1.00 1 2 738.88550 1476.76372 -3.81 28.69 3198 3198 MS2 20/22 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLETK 9 0 CID 56.68 5.27 1.00 1 2 738.88452 1476.76177 -5.13 28.53 3062 3062 MS2 20/22 Linfeng_091611_rIgG_1.raw High FLEQQNQVLETK 9 0 CID 19.85 5.25 1.00 1 2 738.88477 1476.76225 -4.80 28.71 3156 3156 MS2 18/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLETK 9 0 CID 30.00 5.20 1.00 1 2 738.88513 1476.76299 -4.30 28.49 3160 3160 MS2 20/22 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLETK 9 0 CID 68.14 5.16 1.00 1 2 738.88544 1476.76360 -3.89 28.82 3347 3347 MS2 20/22 Linfeng_091811_SIN3A_5.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 24.45 5.15 1.00 1 2 738.88531 1476.76335 -4.05 29.05 5792 5792 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLETK 9 0 CID 32.57 5.13 1.00 1 2 738.88458 1476.76189 -5.05 28.73 2994 2994 MS2 18/22 Linfeng_091811_SIN3A_7.raw High FLEQQNQVLETK 9 0 CID 24.45 5.06 1.00 1 2 738.88489 1476.76250 -4.63 28.51 3060 3060 MS2 20/22 Linfeng_091611_rIgG_9.raw High FLEQQNQVLETK 9 0 CID 38.79 5.00 1.00 1 2 738.88470 1476.76213 -4.88 28.47 3060 3060 MS2 20/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLETK 9 0 CID 68.87 4.89 1.00 1 2 738.88666 1476.76604 -2.24 28.68 3160 3160 MS2 20/22 Linfeng_091611_rIgG_7.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 17.72 4.70 1.00 1 2 738.88702 1476.76677 -1.74 29.32 5808 5808 MS2 18/22 Linfeng_081211_IgG_7.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 27.54 4.67 1.00 1 2 738.88574 1476.76421 -3.48 28.83 5840 5840 MS2 17/22 Linfeng_081211_IgG_8.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 31.96 4.63 1.00 1 2 738.88721 1476.76714 -1.49 29.31 5686 5686 MS2 19/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLETK 9 0 CID 57.91 4.62 1.00 1 2 738.88647 1476.76567 -2.48 28.69 2706 2706 MS2 18/22 Linfeng_091611_rIgG_3.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 44.71 4.56 1.00 1 2 738.88477 1476.76225 -4.80 31.23 6714 6714 MS2 17/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 14.07 4.35 1.00 1 2 738.88727 1476.76726 -1.41 29.06 5799 5799 MS2 16/22 Linfeng_081211_IgG_10.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 52.77 4.16 1.00 1 2 738.88708 1476.76689 -1.66 35.30 5114 5114 MS2 14/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLETK 9 0 CID 24.87 4.15 1.00 1 2 738.88580 1476.76433 -3.39 29.45 3314 3314 MS2 15/22 Linfeng_091811_SIN3A_6.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 23.92 4.04 1.00 1 2 738.88727 1476.76726 -1.41 30.42 6250 6250 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 10.46 4.00 1.00 1 2 738.88684 1476.76641 -1.99 30.53 6139 6139 MS2 15/22 Linfeng_081211_IgG_5.raw High LALDmEIATYR IPI:IPI00329306.3;IPI:IPI00793641.1 6 2 CID M5(Oxidation) 62.29 3.95 1.00 1 2 656.33459 1311.66191 0.41 34.30 7469 7469 MS2 14/20 Linfeng_081211_IgG_5.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 18.39 3.70 1.00 1 2 738.88647 1476.76567 -2.48 29.69 6146 6146 MS2 13/22 Linfeng_081211_IgG_8.raw High DVDAAYmNK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00793641.1;IPI:IPI00909059.5;IPI:IPI00956313.1 15 5 CID M7(Oxidation) 39.94 3.51 1.00 1 2 521.72980 1042.45232 1.23 20.17 2089 2089 MS2 13/16 Linfeng_081211_IgG_1.raw IPI:IPI00793922.1 83 8.7 9.55 9 kDa protein 34.94 12 2 66.64 34.94 12 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 22.96 4.14 1.00 1 2 706.39819 1411.78911 -0.94 33.03 7011 7011 MS2 11/28 Linfeng_081211_IgG_5.raw High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 25.95 4.05 1.00 1 2 706.39832 1411.78935 -0.76 32.76 7248 7248 MS2 15/28 Linfeng_081211_IgG_8.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 86.92 4.03 1.00 1 2 765.90027 1530.79326 -0.83 33.51 7253 7253 MS2 13/26 Linfeng_081211_IgG_10.raw High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 32.30 4.00 1.00 1 2 706.39764 1411.78801 -1.71 33.90 7722 7722 MS2 14/28 Linfeng_081211_IgG_3.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 83.78 3.92 1.00 1 2 765.90112 1530.79497 0.29 34.52 7963 7963 MS2 16/26 Linfeng_081211_IgG_3.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 75.18 3.87 1.00 1 2 765.90118 1530.79509 0.37 33.83 7420 7420 MS2 16/26 Linfeng_081211_IgG_6.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 96.46 3.80 1.00 1 2 765.89966 1530.79204 -1.62 33.89 7329 7329 MS2 13/26 Linfeng_081211_IgG_5.raw High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 14.39 3.74 1.00 1 2 706.39825 1411.78923 -0.85 33.02 7137 7137 MS2 11/28 Linfeng_081211_IgG_6.raw High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 13.90 3.49 1.00 1 2 706.39832 1411.78935 -0.76 33.11 7152 7152 MS2 14/28 Linfeng_081211_IgG_7.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 80.11 3.49 1.00 1 2 765.90021 1530.79314 -0.91 33.91 7437 7437 MS2 15/26 Linfeng_081211_IgG_7.raw High GALQNIIPASTGAAK IPI:IPI00793922.1 6 1 CID 12.40 3.47 1.00 1 2 706.39966 1411.79204 1.14 41.97 6784 6784 MS2 9/28 Linfeng_081211_IgG_1.raw High VPTANVSVVDLTcR IPI:IPI00793922.1 6 1 CID C13(Carbamidomethyl) 58.61 3.47 1.00 1 2 765.90009 1530.79289 -1.07 33.75 7301 7301 MS2 13/26 Linfeng_081211_IgG_4.raw IPI:IPI00797471.3 366 41.6 5.53 42 kDa protein 12.30 114 4 135.48 12.30 12 4 417.40 3.01 59 1 298.80 3.01 43 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LALDIEIATYR 18 0 CID 74.39 4.64 1.00 2 2 639.35675 1277.70622 -2.98 43.24 5095 5095 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 76.51 4.57 1.00 2 2 639.35730 1277.70732 -2.12 40.03 4545 4545 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 79.48 4.54 1.00 2 2 639.35760 1277.70793 -1.64 41.13 4452 4452 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 67.98 4.53 1.00 2 2 639.35693 1277.70659 -2.69 42.13 4953 4953 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 49.93 4.52 1.00 2 2 639.35950 1277.71172 1.32 47.80 5672 5672 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 68.12 4.51 1.00 2 2 639.35614 1277.70500 -3.93 41.03 4901 4901 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 73.22 4.50 1.00 2 2 639.35693 1277.70659 -2.69 40.41 4641 4641 MS2 18/20 Linfeng_091811_SIN3A_9.raw High LALDIEIATYR 18 0 CID 72.43 4.48 1.00 2 2 639.35718 1277.70708 -2.31 40.09 4321 4321 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 70.38 4.48 1.00 2 2 639.35736 1277.70745 -2.02 41.35 4664 4664 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 55.08 4.46 1.00 2 2 639.35828 1277.70928 -0.59 50.87 5918 5918 MS2 15/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.36 4.45 1.00 2 2 639.35791 1277.70854 -1.16 40.26 9340 9340 MS2 18/20 Linfeng_081211_IgG_4.raw High LALDIEIATYR 18 0 CID 77.19 4.45 1.00 2 2 639.35785 1277.70842 -1.26 42.32 4847 4847 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 58.29 4.45 1.00 2 2 639.35858 1277.70989 -0.11 48.83 5662 5662 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 60.43 4.44 1.00 2 2 639.35699 1277.70671 -2.60 41.28 4866 4866 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 61.07 4.44 1.00 2 2 639.35687 1277.70647 -2.79 47.51 5532 5532 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.30 4.44 1.00 2 2 639.35767 1277.70806 -1.55 40.08 4640 4640 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.17 4.44 1.00 2 2 639.35913 1277.71099 0.75 40.34 9594 9594 MS2 17/20 Linfeng_081211_IgG_7.raw High LALDIEIATYR 18 0 CID 72.54 4.43 1.00 2 2 639.35645 1277.70561 -3.46 40.34 4730 4730 MS2 18/20 Linfeng_091811_SIN3A_6.raw High LALDIEIATYR 18 0 CID 71.04 4.42 1.00 2 2 639.35693 1277.70659 -2.69 41.11 4822 4822 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.66 4.42 1.00 2 2 639.35608 1277.70488 -4.03 40.29 4529 4529 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 73.64 4.42 1.00 2 2 639.35596 1277.70464 -4.22 41.11 4715 4715 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 69.41 4.39 1.00 2 2 639.35724 1277.70720 -2.22 40.09 4697 4697 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 51.08 4.39 1.00 2 2 639.35730 1277.70732 -2.12 46.84 5415 5415 MS2 16/20 Linfeng_091611_rIgG_2.raw High LAQLEAALQQAK IPI:IPI00797471.3 4 1 CID 61.30 4.39 1.00 1 2 642.36877 1283.73027 -1.22 33.00 7131 7131 MS2 17/22 Linfeng_081211_IgG_6.raw High LALDIEIATYR 18 0 CID 71.25 4.39 1.00 2 2 639.35730 1277.70732 -2.12 40.26 4734 4734 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 79.65 4.38 1.00 2 2 639.35754 1277.70781 -1.74 41.27 4714 4714 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 59.23 4.38 1.00 2 2 639.35748 1277.70769 -1.83 43.35 4979 4979 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 73.29 4.38 1.00 2 2 639.35663 1277.70598 -3.17 39.89 4132 4132 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 77.06 4.38 1.00 2 2 639.35663 1277.70598 -3.17 40.43 4592 4592 MS2 18/20 Linfeng_091811_SIN3A_8.raw High LALDIEIATYR 18 0 CID 65.38 4.37 1.00 2 2 639.35651 1277.70574 -3.36 40.11 4694 4694 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 74.05 4.37 1.00 2 2 639.35608 1277.70488 -4.03 41.10 4286 4286 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 78.75 4.37 1.00 2 2 639.35675 1277.70622 -2.98 40.12 4662 4662 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.04 4.36 1.00 2 2 639.35779 1277.70830 -1.36 45.45 5463 5463 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 76.07 4.36 1.00 2 2 639.35681 1277.70635 -2.88 39.96 4760 4760 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 75.43 4.36 1.00 2 2 639.35663 1277.70598 -3.17 45.36 5361 5361 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 60.74 4.36 1.00 2 2 639.35657 1277.70586 -3.27 42.75 5002 5002 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 56.40 4.35 1.00 2 2 639.35767 1277.70806 -1.55 49.16 5733 5733 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 67.31 4.35 1.00 2 2 639.35657 1277.70586 -3.27 40.36 4515 4515 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 56.99 4.35 1.00 2 2 639.35773 1277.70818 -1.45 50.07 5785 5785 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 65.43 4.35 1.00 2 2 639.35699 1277.70671 -2.60 43.36 5114 5114 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 58.16 4.35 1.00 2 2 639.35730 1277.70732 -2.12 40.18 4732 4732 MS2 18/20 Linfeng_091611_rIgG_6.raw High LALDIEIATYR 18 0 CID 71.18 4.34 1.00 2 2 639.35651 1277.70574 -3.36 41.19 4801 4801 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 49.21 4.34 1.00 2 2 639.35986 1277.71245 1.89 54.39 6420 6420 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 59.05 4.34 1.00 2 2 639.35736 1277.70745 -2.02 40.08 4863 4863 MS2 18/20 Linfeng_091611_rIgG_8.raw High LALDIEIATYR 18 0 CID 55.20 4.34 1.00 2 2 639.35870 1277.71013 0.08 55.48 6559 6559 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 61.60 4.33 1.00 2 2 639.35638 1277.70549 -3.55 40.02 4574 4574 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.92 4.32 1.00 2 2 639.35590 1277.70452 -4.32 41.56 4668 4668 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 66.07 4.32 1.00 2 2 639.35980 1277.71233 1.80 54.48 5929 5929 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.17 4.31 1.00 2 2 639.35968 1277.71208 1.61 54.36 6260 6260 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 59.60 4.31 1.00 2 2 639.35803 1277.70879 -0.97 41.21 4786 4786 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR 18 0 CID 60.55 4.30 1.00 2 2 639.35754 1277.70781 -1.74 46.40 5492 5492 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 69.47 4.29 1.00 2 2 639.35681 1277.70635 -2.88 40.13 4735 4735 MS2 18/20 Linfeng_091611_rIgG_5.raw High LALDIEIATYR 18 0 CID 59.26 4.28 1.00 2 2 639.35791 1277.70854 -1.16 55.00 6451 6451 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 53.03 4.28 1.00 2 2 639.35669 1277.70610 -3.08 45.08 5331 5331 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 77.31 4.28 1.00 2 2 639.35699 1277.70671 -2.60 41.07 4677 4677 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 48.36 4.27 1.00 2 2 639.35736 1277.70745 -2.02 57.72 6821 6821 MS2 15/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.62 4.27 1.00 2 2 639.35754 1277.70781 -1.74 50.20 5426 5426 MS2 15/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.23 4.26 1.00 2 2 639.35779 1277.70830 -1.36 42.61 4875 4875 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.87 4.25 1.00 2 2 639.35852 1277.70976 -0.21 56.53 6145 6145 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.26 4.25 1.00 2 2 639.35773 1277.70818 -1.45 56.99 6644 6644 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 63.44 4.24 1.00 2 2 639.35791 1277.70854 -1.16 57.20 6548 6548 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 80.54 4.24 1.00 2 2 639.35883 1277.71037 0.27 53.92 6249 6249 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 65.19 4.24 1.00 2 2 639.35760 1277.70793 -1.64 45.30 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 62.40 4.24 1.00 2 2 639.35944 1277.71160 1.22 47.04 5431 5431 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 55.71 4.23 1.00 2 2 639.35876 1277.71025 0.17 53.30 6162 6162 MS2 17/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 52.12 4.23 1.00 2 2 639.35699 1277.70671 -2.60 58.44 7078 7078 MS2 16/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 44.05 4.23 1.00 2 2 639.35828 1277.70928 -0.59 50.81 6046 6046 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 40.37 4.23 1.00 2 2 639.35785 1277.70842 -1.26 46.96 5535 5535 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 31.44 4.22 1.00 2 2 639.35651 1277.70574 -3.36 44.25 5222 5222 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 64.31 4.22 1.00 2 2 639.35675 1277.70622 -2.98 46.01 4908 4908 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 63.92 4.22 1.00 2 2 639.35681 1277.70635 -2.88 42.34 4984 4984 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 73.74 4.22 1.00 2 2 639.35693 1277.70659 -2.69 44.58 4727 4727 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.53 4.21 1.00 2 2 639.35724 1277.70720 -2.22 54.73 6304 6304 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 81.93 4.21 1.00 2 2 639.35645 1277.70561 -3.46 42.51 4466 4466 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 76.91 4.21 1.00 2 2 639.35736 1277.70745 -2.02 40.28 4886 4886 MS2 18/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 74.05 4.21 1.00 2 2 639.35632 1277.70537 -3.65 42.42 4886 4886 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.76 4.20 1.00 2 2 639.35785 1277.70842 -1.26 51.80 6160 6160 MS2 16/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 63.73 4.20 1.00 2 2 639.35846 1277.70964 -0.30 47.82 5536 5536 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 54.51 4.18 1.00 2 2 639.35699 1277.70671 -2.60 41.23 4842 4842 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.60 4.18 1.00 2 2 639.35822 1277.70915 -0.69 45.71 5263 5263 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 72.51 4.17 1.00 2 2 639.35864 1277.71001 -0.02 45.63 5263 5263 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 77.88 4.17 1.00 2 2 639.35797 1277.70867 -1.07 40.14 9229 9229 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 51.47 4.17 1.00 2 2 639.35846 1277.70964 -0.30 51.21 5551 5551 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.44 4.16 1.00 2 2 639.35907 1277.71086 0.65 53.41 5818 5818 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.78 4.16 1.00 2 2 639.35858 1277.70989 -0.11 51.02 6045 6045 MS2 16/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.75 4.16 1.00 2 2 639.35803 1277.70879 -0.97 51.16 5918 5918 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.19 4.15 1.00 2 2 639.35748 1277.70769 -1.83 49.79 5916 5916 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 56.10 4.15 1.00 2 2 639.35889 1277.71050 0.36 50.84 6048 6048 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 70.88 4.15 1.00 2 2 639.35748 1277.70769 -1.83 47.71 5656 5656 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 55.55 4.15 1.00 2 2 639.35938 1277.71147 1.13 51.67 6046 6046 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 64.79 4.14 1.00 2 2 639.35864 1277.71001 -0.02 53.71 6297 6297 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.36 4.14 1.00 2 2 639.35663 1277.70598 -3.17 58.99 6872 6872 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 48.16 4.13 1.00 2 2 639.35895 1277.71062 0.46 53.39 6431 6431 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.88 4.13 1.00 2 2 639.35950 1277.71172 1.32 53.89 6378 6378 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.97 4.12 1.00 2 2 639.35754 1277.70781 -1.74 40.23 4581 4581 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 45.33 4.12 1.00 2 2 639.35718 1277.70708 -2.31 48.76 5787 5787 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 66.71 4.12 1.00 2 2 639.35931 1277.71135 1.03 54.32 6396 6396 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.76 4.12 1.00 2 2 639.35718 1277.70708 -2.31 47.57 5724 5724 MS2 16/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 60.61 4.11 1.00 2 2 639.35712 1277.70696 -2.41 52.88 6281 6281 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 65.97 4.10 1.00 2 2 639.35687 1277.70647 -2.79 42.36 5006 5006 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 51.06 4.10 1.00 2 2 639.35791 1277.70854 -1.16 56.60 6731 6731 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 49.83 4.10 1.00 2 2 639.35999 1277.71269 2.08 54.43 6527 6527 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 80.27 4.09 1.00 2 2 639.35779 1277.70830 -1.36 50.66 5920 5920 MS2 17/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 60.93 4.09 1.00 2 2 639.35925 1277.71123 0.94 55.49 6056 6056 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 47.53 4.08 1.00 2 2 639.36035 1277.71343 2.66 55.17 6383 6383 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 64.57 4.07 1.00 2 2 639.35559 1277.70391 -4.79 45.11 5232 5232 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 52.55 4.06 1.00 2 2 639.35870 1277.71013 0.08 40.31 9658 9658 MS2 14/20 Linfeng_081211_IgG_8.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 34.23 4.01 1.00 2 2 639.35919 1277.71111 0.84 41.29 9835 9835 MS2 15/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 54.99 3.99 1.00 2 2 639.36005 1277.71282 2.18 40.23 9494 9494 MS2 14/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 59.78 3.98 1.00 2 2 639.35870 1277.71013 0.08 41.43 10337 10337 MS2 15/20 Linfeng_081211_IgG_3.raw High LAQLEAALQQAK IPI:IPI00797471.3 4 1 CID 54.96 3.92 1.00 1 2 642.36908 1283.73088 -0.75 33.06 7137 7137 MS2 15/22 Linfeng_081211_IgG_7.raw High SAEYGSSLQSSR IPI:IPI00797471.3 4 1 CID 68.18 3.79 1.00 1 2 636.29712 1271.58696 0.54 21.35 3509 3509 MS2 17/22 Linfeng_081211_IgG_6.raw High SLEEAEAYSR IPI:IPI00797471.3 4 1 CID 51.38 3.72 1.00 1 2 577.76880 1154.53032 -1.85 25.90 4583 4583 MS2 15/18 Linfeng_081211_IgG_2.raw High SAEYGSSLQSSR IPI:IPI00797471.3 4 1 CID 77.85 3.47 1.00 1 2 636.29590 1271.58452 -1.38 21.76 3349 3349 MS2 17/22 Linfeng_081211_IgG_5.raw IPI:IPI00383296.5 691 73.6 8.82 Isoform 2 of Heterogeneous nuclear ribonucleoprotein M 25.62 38 11 261.27 16.79 13 8 269.51 13.02 11 5 382.35 17.08 14 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GIGTVTFEQSIEAVQAISmFNGQLLFDRPmHVK IPI:IPI00383296.5 2 1 CID "M19(Oxidation), M30(Oxidation)" 50.95 7.01 1.00 1 4 924.72223 3695.86709 2.95 51.62 6141 6141 MS2 38/192 Linfeng_091811_SIN3A_3.raw High VGEVTYVELLmDAEGK IPI:IPI00383296.5 2 1 CID M11(Oxidation) 81.02 6.69 1.00 1 3 590.29309 1768.86472 -1.54 43.11 5082 5082 MS2 33/60 Linfeng_091811_SIN3A_3.raw High GIGTVTFEQSIEAVQAISmFNGQLLFDRPmHVK 2 0 CID "M19(Oxidation), M30(Oxidation)" 71.87 5.99 1.00 1 4 924.72058 3695.86049 1.16 51.23 5553 5553 MS2 31/192 Linfeng_091611_rIgG_3.raw High VGEVTYVELLMDAEGK IPI:IPI00383296.5 2 1 CID 80.23 5.96 1.00 1 2 876.93988 1752.87248 -0.02 46.24 5478 5478 MS2 21/30 Linfeng_091811_SIN3A_3.raw High VGEVTYVELLMDAEGK IPI:IPI00383296.5 2 1 CID 98.20 5.89 1.00 1 3 584.96185 1752.87101 -0.86 46.22 5475 5475 MS2 38/60 Linfeng_091811_SIN3A_3.raw High VGEVTYVELLmDAEGK IPI:IPI00383296.5 2 1 CID M11(Oxidation) 78.09 5.86 1.00 1 2 884.93585 1768.86443 -1.70 43.13 5085 5085 MS2 23/30 Linfeng_091811_SIN3A_3.raw High LKEVFSmAGVVVR 2 0 CID M7(Oxidation) 58.73 5.84 1.00 1 3 484.27246 1450.80283 -4.07 29.40 2800 2800 MS2 28/48 Linfeng_091611_rIgG_3.raw High VGEVTYVELLMDAEGK 2 0 CID 86.85 5.75 1.00 1 2 876.93829 1752.86931 -1.83 46.00 5531 5531 MS2 22/30 Linfeng_091611_rIgG_4.raw High VGEVTYVELLmDAEGK IPI:IPI00383296.5 2 1 CID M11(Oxidation) 55.02 5.72 1.00 1 2 884.93939 1768.87151 2.30 43.99 11194 11194 MS2 19/30 Linfeng_081211_IgG_3.raw High VGEVTYVELLMDAEGK 2 0 CID 79.93 5.71 1.00 1 2 876.93781 1752.86833 -2.39 45.97 4902 4902 MS2 22/30 Linfeng_091611_rIgG_3.raw High VGEVTYVELLMDAEGK 2 0 CID 93.30 5.62 1.00 1 3 584.96045 1752.86679 -3.27 45.98 4904 4904 MS2 34/60 Linfeng_091611_rIgG_3.raw High VGEVTYVELLmDAEGK IPI:IPI00383296.5 2 1 CID M11(Oxidation) 83.83 5.49 1.00 1 2 884.93732 1768.86736 -0.04 43.18 5113 5113 MS2 22/30 Linfeng_091811_SIN3A_4.raw High VGEVTYVELLmDAEGK IPI:IPI00383296.5 2 1 CID M11(Oxidation) 52.02 5.26 1.00 1 3 590.29364 1768.86637 -0.60 43.34 5134 5134 MS2 32/60 Linfeng_091811_SIN3A_4.raw High VGEVTYVELLMDAEGK 2 0 CID 69.49 5.25 1.00 1 3 584.96094 1752.86826 -2.43 46.02 5533 5533 MS2 35/60 Linfeng_091611_rIgG_4.raw High LKEVFSmAGVVVR IPI:IPI00383296.5 2 1 CID M7(Oxidation) 23.86 5.23 1.00 1 3 484.27280 1450.80384 -3.38 29.71 3338 3338 MS2 26/48 Linfeng_091811_SIN3A_3.raw High VGEVTYVELLmDAEGK 2 0 CID M11(Oxidation) 72.89 5.13 1.00 1 2 884.93372 1768.86016 -4.12 43.10 4540 4540 MS2 12/30 Linfeng_091611_rIgG_3.raw High LGSTVFVANLDYK 2 0 CID 90.55 4.96 1.00 1 2 713.88031 1426.75334 -3.06 36.24 3665 3665 MS2 19/24 Linfeng_091611_rIgG_3.raw High MGPAmGPALGAGIER IPI:IPI00383296.5 2 1 CID M5(Oxidation) 91.64 4.85 1.00 1 2 722.35608 1443.70488 -2.43 29.43 3300 3300 MS2 21/28 Linfeng_091811_SIN3A_3.raw High LGSTVFVANLDYK 2 0 CID 100.40 4.83 1.00 1 2 713.88025 1426.75322 -3.15 36.21 4272 4272 MS2 19/24 Linfeng_091611_rIgG_4.raw High LGSTVFVANLDYK IPI:IPI00383296.5 2 1 CID 68.30 4.81 1.00 1 2 713.88031 1426.75334 -3.06 36.40 4219 4219 MS2 19/24 Linfeng_091811_SIN3A_3.raw High mGPAmGPALGAGIER IPI:IPI00383296.5 2 1 CID "M1(Oxidation), M5(Oxidation)" 72.80 4.66 1.00 1 2 730.35382 1459.70036 -2.02 28.52 5754 5754 MS2 20/28 Linfeng_081211_IgG_3.raw High MGPAmGPALGAGIER 2 0 CID M5(Oxidation) 73.63 4.64 1.00 1 2 722.35553 1443.70378 -3.20 29.25 3358 3358 MS2 17/28 Linfeng_091611_rIgG_4.raw High LGSTVFVANLDYK IPI:IPI00383296.5 2 1 CID 45.22 4.54 1.00 1 2 713.88208 1426.75688 -0.58 36.64 8173 8173 MS2 18/24 Linfeng_081211_IgG_4.raw High mGPAmGPALGAGIER 2 0 CID "M1(Oxidation), M5(Oxidation)" 64.02 4.52 1.00 1 2 730.35339 1459.69951 -2.60 27.02 2491 2491 MS2 20/28 Linfeng_091611_rIgG_3.raw High LGSTVFVANLDYK IPI:IPI00383296.5 2 1 CID 46.19 4.51 1.00 1 2 713.88269 1426.75810 0.28 37.60 9052 9052 MS2 16/24 Linfeng_081211_IgG_3.raw High LGSTVFVANLDYK IPI:IPI00383296.5 2 1 CID 73.54 4.41 1.00 1 2 713.88025 1426.75322 -3.15 36.69 4276 4276 MS2 17/24 Linfeng_091811_SIN3A_4.raw High FNEcGHVLYADIK IPI:IPI00383296.5 2 1 CID C4(Carbamidomethyl) 75.59 4.40 1.00 1 3 522.58398 1565.73740 -2.78 29.40 3297 3297 MS2 24/48 Linfeng_091811_SIN3A_3.raw High MGLAmGGGGGASFDR IPI:IPI00383296.5 2 1 CID M5(Oxidation) 64.54 4.32 1.00 1 2 700.30701 1399.60674 -1.91 27.51 3038 3038 MS2 18/28 Linfeng_091811_SIN3A_3.raw High mGPAMGPALGAGIER IPI:IPI00383296.5 2 1 CID M1(Oxidation) 60.08 4.28 1.00 1 2 722.35553 1443.70378 -3.20 30.84 3491 3491 MS2 22/28 Linfeng_091811_SIN3A_3.raw High LKEVFSmAGVVVR IPI:IPI00383296.5 2 1 CID M7(Oxidation) 34.75 4.24 1.00 1 3 484.27423 1450.80814 -0.41 30.38 6178 6178 MS2 21/48 Linfeng_081211_IgG_4.raw High MGPAmGPALGAGIER IPI:IPI00383296.5 2 1 CID M5(Oxidation) 47.70 4.03 1.00 1 2 722.35730 1443.70732 -0.74 30.71 6538 6538 MS2 17/28 Linfeng_081211_IgG_3.raw High QGGGGGGGSVPGIER IPI:IPI00383296.5 2 1 CID 30.76 3.85 1.00 1 2 642.81775 1284.62822 -0.75 23.81 4257 4257 MS2 13/28 Linfeng_081211_IgG_3.raw High AFITNIPFDVK IPI:IPI00383296.5 2 1 CID 40.47 3.67 1.00 1 2 632.85083 1264.69438 0.57 41.84 10483 10483 MS2 15/20 Linfeng_081211_IgG_3.raw High QGGGGGGGSVPGIER IPI:IPI00383296.5 2 1 CID 23.32 3.66 1.00 1 2 642.81799 1284.62871 -0.37 23.04 3871 3871 MS2 11/28 Linfeng_081211_IgG_4.raw High AFITNIPFDVK IPI:IPI00383296.5 2 1 CID 44.95 3.64 1.00 1 2 632.85107 1264.69487 0.96 40.77 9491 9491 MS2 17/20 Linfeng_081211_IgG_4.raw High AFITNIPFDVK IPI:IPI00383296.5 2 1 CID 32.69 3.55 1.00 1 2 632.85175 1264.69621 2.02 40.43 9570 9570 MS2 14/20 Linfeng_081211_IgG_10.raw High GNFGGSFAGSFGGAGGHAPGVAR IPI:IPI00383296.5 2 1 CID 68.74 3.51 1.00 1 2 1017.98138 2034.95549 1.21 32.33 6836 6836 MS2 14/44 Linfeng_081211_IgG_4.raw High INEILSNALK IPI:IPI00383296.5 2 1 CID 44.32 3.47 1.00 1 2 557.82715 1114.64702 0.29 34.44 7931 7931 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00793917.1 237 26.8 4.72 27 kDa protein 23.63 115 5 114.64 23.63 13 5 418.13 4.64 59 1 298.92 4.64 43 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ASLEAAIADAEQR IPI:IPI00793917.1 4 1 CID 64.13 4.67 1.00 1 2 672.84064 1344.67400 -1.09 34.89 7670 7670 MS2 18/24 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 74.39 4.64 1.00 2 2 639.35675 1277.70622 -2.98 43.24 5095 5095 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 76.51 4.57 1.00 2 2 639.35730 1277.70732 -2.12 40.03 4545 4545 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 79.48 4.54 1.00 2 2 639.35760 1277.70793 -1.64 41.13 4452 4452 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 67.98 4.53 1.00 2 2 639.35693 1277.70659 -2.69 42.13 4953 4953 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 49.93 4.52 1.00 2 2 639.35950 1277.71172 1.32 47.80 5672 5672 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 68.12 4.51 1.00 2 2 639.35614 1277.70500 -3.93 41.03 4901 4901 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 73.22 4.50 1.00 2 2 639.35693 1277.70659 -2.69 40.41 4641 4641 MS2 18/20 Linfeng_091811_SIN3A_9.raw High LALDIEIATYR 18 0 CID 72.43 4.48 1.00 2 2 639.35718 1277.70708 -2.31 40.09 4321 4321 MS2 18/20 Linfeng_091611_rIgG_10.raw High LALDIEIATYR 18 0 CID 70.38 4.48 1.00 2 2 639.35736 1277.70745 -2.02 41.35 4664 4664 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 55.08 4.46 1.00 2 2 639.35828 1277.70928 -0.59 50.87 5918 5918 MS2 15/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.36 4.45 1.00 2 2 639.35791 1277.70854 -1.16 40.26 9340 9340 MS2 18/20 Linfeng_081211_IgG_4.raw High LALDIEIATYR 18 0 CID 77.19 4.45 1.00 2 2 639.35785 1277.70842 -1.26 42.32 4847 4847 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 58.29 4.45 1.00 2 2 639.35858 1277.70989 -0.11 48.83 5662 5662 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 60.43 4.44 1.00 2 2 639.35699 1277.70671 -2.60 41.28 4866 4866 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 61.07 4.44 1.00 2 2 639.35687 1277.70647 -2.79 47.51 5532 5532 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.30 4.44 1.00 2 2 639.35767 1277.70806 -1.55 40.08 4640 4640 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 68.17 4.44 1.00 2 2 639.35913 1277.71099 0.75 40.34 9594 9594 MS2 17/20 Linfeng_081211_IgG_7.raw High LALDIEIATYR 18 0 CID 72.54 4.43 1.00 2 2 639.35645 1277.70561 -3.46 40.34 4730 4730 MS2 18/20 Linfeng_091811_SIN3A_6.raw High LALDIEIATYR 18 0 CID 71.04 4.42 1.00 2 2 639.35693 1277.70659 -2.69 41.11 4822 4822 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.66 4.42 1.00 2 2 639.35608 1277.70488 -4.03 40.29 4529 4529 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDIEIATYR 18 0 CID 73.64 4.42 1.00 2 2 639.35596 1277.70464 -4.22 41.11 4715 4715 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 69.41 4.39 1.00 2 2 639.35724 1277.70720 -2.22 40.09 4697 4697 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 51.08 4.39 1.00 2 2 639.35730 1277.70732 -2.12 46.84 5415 5415 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 71.25 4.39 1.00 2 2 639.35730 1277.70732 -2.12 40.26 4734 4734 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 79.65 4.38 1.00 2 2 639.35754 1277.70781 -1.74 41.27 4714 4714 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 59.23 4.38 1.00 2 2 639.35748 1277.70769 -1.83 43.35 4979 4979 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 73.29 4.38 1.00 2 2 639.35663 1277.70598 -3.17 39.89 4132 4132 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 77.06 4.38 1.00 2 2 639.35663 1277.70598 -3.17 40.43 4592 4592 MS2 18/20 Linfeng_091811_SIN3A_8.raw High LALDIEIATYR 18 0 CID 65.38 4.37 1.00 2 2 639.35651 1277.70574 -3.36 40.11 4694 4694 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 74.05 4.37 1.00 2 2 639.35608 1277.70488 -4.03 41.10 4286 4286 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 78.75 4.37 1.00 2 2 639.35675 1277.70622 -2.98 40.12 4662 4662 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 46.04 4.36 1.00 2 2 639.35779 1277.70830 -1.36 45.45 5463 5463 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 76.07 4.36 1.00 2 2 639.35681 1277.70635 -2.88 39.96 4760 4760 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 75.43 4.36 1.00 2 2 639.35663 1277.70598 -3.17 45.36 5361 5361 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 60.74 4.36 1.00 2 2 639.35657 1277.70586 -3.27 42.75 5002 5002 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 56.40 4.35 1.00 2 2 639.35767 1277.70806 -1.55 49.16 5733 5733 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 67.31 4.35 1.00 2 2 639.35657 1277.70586 -3.27 40.36 4515 4515 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 56.99 4.35 1.00 2 2 639.35773 1277.70818 -1.45 50.07 5785 5785 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 65.43 4.35 1.00 2 2 639.35699 1277.70671 -2.60 43.36 5114 5114 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 58.16 4.35 1.00 2 2 639.35730 1277.70732 -2.12 40.18 4732 4732 MS2 18/20 Linfeng_091611_rIgG_6.raw High LALDIEIATYR 18 0 CID 71.18 4.34 1.00 2 2 639.35651 1277.70574 -3.36 41.19 4801 4801 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 49.21 4.34 1.00 2 2 639.35986 1277.71245 1.89 54.39 6420 6420 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 59.05 4.34 1.00 2 2 639.35736 1277.70745 -2.02 40.08 4863 4863 MS2 18/20 Linfeng_091611_rIgG_8.raw High LALDIEIATYR 18 0 CID 55.20 4.34 1.00 2 2 639.35870 1277.71013 0.08 55.48 6559 6559 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 61.60 4.33 1.00 2 2 639.35638 1277.70549 -3.55 40.02 4574 4574 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 76.92 4.32 1.00 2 2 639.35590 1277.70452 -4.32 41.56 4668 4668 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDIEIATYR 18 0 CID 66.07 4.32 1.00 2 2 639.35980 1277.71233 1.80 54.48 5929 5929 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.17 4.31 1.00 2 2 639.35968 1277.71208 1.61 54.36 6260 6260 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 59.60 4.31 1.00 2 2 639.35803 1277.70879 -0.97 41.21 4786 4786 MS2 18/20 Linfeng_091611_rIgG_7.raw High LALDIEIATYR 18 0 CID 60.55 4.30 1.00 2 2 639.35754 1277.70781 -1.74 46.40 5492 5492 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 69.47 4.29 1.00 2 2 639.35681 1277.70635 -2.88 40.13 4735 4735 MS2 18/20 Linfeng_091611_rIgG_5.raw High LALDIEIATYR 18 0 CID 59.26 4.28 1.00 2 2 639.35791 1277.70854 -1.16 55.00 6451 6451 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 53.03 4.28 1.00 2 2 639.35669 1277.70610 -3.08 45.08 5331 5331 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 77.31 4.28 1.00 2 2 639.35699 1277.70671 -2.60 41.07 4677 4677 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 48.36 4.27 1.00 2 2 639.35736 1277.70745 -2.02 57.72 6821 6821 MS2 15/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.62 4.27 1.00 2 2 639.35754 1277.70781 -1.74 50.20 5426 5426 MS2 15/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.23 4.26 1.00 2 2 639.35779 1277.70830 -1.36 42.61 4875 4875 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.87 4.25 1.00 2 2 639.35852 1277.70976 -0.21 56.53 6145 6145 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.26 4.25 1.00 2 2 639.35773 1277.70818 -1.45 56.99 6644 6644 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 63.44 4.24 1.00 2 2 639.35791 1277.70854 -1.16 57.20 6548 6548 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 80.54 4.24 1.00 2 2 639.35883 1277.71037 0.27 53.92 6249 6249 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 65.19 4.24 1.00 2 2 639.35760 1277.70793 -1.64 45.30 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 62.40 4.24 1.00 2 2 639.35944 1277.71160 1.22 47.04 5431 5431 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 55.71 4.23 1.00 2 2 639.35876 1277.71025 0.17 53.30 6162 6162 MS2 17/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 52.12 4.23 1.00 2 2 639.35699 1277.70671 -2.60 58.44 7078 7078 MS2 16/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 44.05 4.23 1.00 2 2 639.35828 1277.70928 -0.59 50.81 6046 6046 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 40.37 4.23 1.00 2 2 639.35785 1277.70842 -1.26 46.96 5535 5535 MS2 15/20 Linfeng_091811_SIN3A_2.raw High LALDIEIATYR 18 0 CID 31.44 4.22 1.00 2 2 639.35651 1277.70574 -3.36 44.25 5222 5222 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 64.31 4.22 1.00 2 2 639.35675 1277.70622 -2.98 46.01 4908 4908 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 63.92 4.22 1.00 2 2 639.35681 1277.70635 -2.88 42.34 4984 4984 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 73.74 4.22 1.00 2 2 639.35693 1277.70659 -2.69 44.58 4727 4727 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 59.53 4.21 1.00 2 2 639.35724 1277.70720 -2.22 54.73 6304 6304 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 81.93 4.21 1.00 2 2 639.35645 1277.70561 -3.46 42.51 4466 4466 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 76.91 4.21 1.00 2 2 639.35736 1277.70745 -2.02 40.28 4886 4886 MS2 18/20 Linfeng_091811_SIN3A_5.raw High LALDIEIATYR 18 0 CID 74.05 4.21 1.00 2 2 639.35632 1277.70537 -3.65 42.42 4886 4886 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.76 4.20 1.00 2 2 639.35785 1277.70842 -1.26 51.80 6160 6160 MS2 16/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 63.73 4.20 1.00 2 2 639.35846 1277.70964 -0.30 47.82 5536 5536 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 54.51 4.18 1.00 2 2 639.35699 1277.70671 -2.60 41.23 4842 4842 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.60 4.18 1.00 2 2 639.35822 1277.70915 -0.69 45.71 5263 5263 MS2 15/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 72.51 4.17 1.00 2 2 639.35864 1277.71001 -0.02 45.63 5263 5263 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 77.88 4.17 1.00 2 2 639.35797 1277.70867 -1.07 40.14 9229 9229 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 51.47 4.17 1.00 2 2 639.35846 1277.70964 -0.30 51.21 5551 5551 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.44 4.16 1.00 2 2 639.35907 1277.71086 0.65 53.41 5818 5818 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 49.78 4.16 1.00 2 2 639.35858 1277.70989 -0.11 51.02 6045 6045 MS2 16/20 Linfeng_091811_SIN3A_2.raw High ASLEAAIADAEQR IPI:IPI00793917.1 4 1 CID 22.71 4.16 1.00 1 3 448.89609 1344.67371 -1.30 34.88 7666 7666 MS2 23/48 Linfeng_081211_IgG_5.raw High LALDIEIATYR 18 0 CID 46.75 4.16 1.00 2 2 639.35803 1277.70879 -0.97 51.16 5918 5918 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDIEIATYR 18 0 CID 50.19 4.15 1.00 2 2 639.35748 1277.70769 -1.83 49.79 5916 5916 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 56.10 4.15 1.00 2 2 639.35889 1277.71050 0.36 50.84 6048 6048 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 70.88 4.15 1.00 2 2 639.35748 1277.70769 -1.83 47.71 5656 5656 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 55.55 4.15 1.00 2 2 639.35938 1277.71147 1.13 51.67 6046 6046 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 64.79 4.14 1.00 2 2 639.35864 1277.71001 -0.02 53.71 6297 6297 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 51.36 4.14 1.00 2 2 639.35663 1277.70598 -3.17 58.99 6872 6872 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 48.16 4.13 1.00 2 2 639.35895 1277.71062 0.46 53.39 6431 6431 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 53.88 4.13 1.00 2 2 639.35950 1277.71172 1.32 53.89 6378 6378 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 71.97 4.12 1.00 2 2 639.35754 1277.70781 -1.74 40.23 4581 4581 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDIEIATYR 18 0 CID 45.33 4.12 1.00 2 2 639.35718 1277.70708 -2.31 48.76 5787 5787 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 66.71 4.12 1.00 2 2 639.35931 1277.71135 1.03 54.32 6396 6396 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDIEIATYR 18 0 CID 55.76 4.12 1.00 2 2 639.35718 1277.70708 -2.31 47.57 5724 5724 MS2 16/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 60.61 4.11 1.00 2 2 639.35712 1277.70696 -2.41 52.88 6281 6281 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDIEIATYR 18 0 CID 65.97 4.10 1.00 2 2 639.35687 1277.70647 -2.79 42.36 5006 5006 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDIEIATYR 18 0 CID 51.06 4.10 1.00 2 2 639.35791 1277.70854 -1.16 56.60 6731 6731 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 49.83 4.10 1.00 2 2 639.35999 1277.71269 2.08 54.43 6527 6527 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDIEIATYR 18 0 CID 80.27 4.09 1.00 2 2 639.35779 1277.70830 -1.36 50.66 5920 5920 MS2 17/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR 18 0 CID 60.93 4.09 1.00 2 2 639.35925 1277.71123 0.94 55.49 6056 6056 MS2 16/20 Linfeng_091611_rIgG_3.raw High LALDIEIATYR 18 0 CID 47.53 4.08 1.00 2 2 639.36035 1277.71343 2.66 55.17 6383 6383 MS2 18/20 Linfeng_091611_rIgG_2.raw High ASLEAAIADAEQR IPI:IPI00793917.1 4 1 CID 32.67 4.08 1.00 1 2 672.84064 1344.67400 -1.09 35.08 7869 7869 MS2 16/24 Linfeng_081211_IgG_6.raw High LALDIEIATYR 18 0 CID 64.57 4.07 1.00 2 2 639.35559 1277.70391 -4.79 45.11 5232 5232 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 52.55 4.06 1.00 2 2 639.35870 1277.71013 0.08 40.31 9658 9658 MS2 14/20 Linfeng_081211_IgG_8.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 34.23 4.01 1.00 2 2 639.35919 1277.71111 0.84 41.29 9835 9835 MS2 15/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 54.99 3.99 1.00 2 2 639.36005 1277.71282 2.18 40.23 9494 9494 MS2 14/20 Linfeng_081211_IgG_10.raw High LALDIEIATYR IPI:IPI00443478.1;IPI:IPI00793917.1;IPI:IPI00797452.2;IPI:IPI00797471.3 18 4 CID 59.78 3.98 1.00 2 2 639.35870 1277.71013 0.08 41.43 10337 10337 MS2 15/20 Linfeng_081211_IgG_3.raw High LEGLTDEINFLR IPI:IPI00793917.1 6 1 CID 84.37 3.80 1.00 1 2 710.37732 1419.74736 -0.37 42.30 9832 9832 MS2 19/22 Linfeng_081211_IgG_5.raw High LSELEAALQR IPI:IPI00017870.1;IPI:IPI00793917.1 4 2 CID 43.18 3.67 1.00 1 2 565.31329 1129.61931 -1.69 33.15 7184 7184 MS2 13/18 Linfeng_081211_IgG_6.raw High YEELQSLAGK IPI:IPI00793917.1 4 1 CID 43.07 3.61 1.00 1 2 569.29230 1137.57732 -1.19 29.23 5656 5656 MS2 15/18 Linfeng_081211_IgG_5.raw IPI:IPI00027834.3 589 64.1 8.22 Heterogeneous nuclear ribonucleoprotein L 31.92 25 9 205.59 16.98 14 6 74.73 16.13 5 4 93.00 22.07 6 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 1 0 CID 87.28 7.01 1.00 1 4 746.05554 2981.20034 -0.80 16.50 1587 1587 MS2 42/204 Linfeng_091611_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR IPI:IPI00027834.3 3 1 CID 134.06 6.59 1.00 1 3 964.08954 2890.25406 -2.88 29.68 3363 3363 MS2 29/100 Linfeng_091811_SIN3A_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR IPI:IPI00465225.1 3 1 CID 135.80 6.49 1.00 1 3 964.09143 2890.25974 -0.92 29.97 5927 5927 MS2 30/100 Linfeng_081211_IgG_5.raw High YGPQYGHPPPPPPPPEYGPHADSPVLmVYGLDQSK IPI:IPI00027834.3 2 1 CID M27(Oxidation) 300.00 6.33 1.00 1 4 950.95447 3800.79604 -2.49 35.42 4110 4110 MS2 43/204 Linfeng_091811_SIN3A_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR 3 0 CID 137.76 6.18 1.00 1 3 964.08960 2890.25425 -2.82 29.30 3366 3366 MS2 30/100 Linfeng_091611_rIgG_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK IPI:IPI00027834.3 1 1 CID 82.50 6.09 1.00 1 4 746.05542 2981.19985 -0.96 16.85 1569 1569 MS2 39/204 Linfeng_091811_SIN3A_4.raw High SKPGAAMVEmADGYAVDR 4 0 CID M10(Oxidation) 72.43 5.43 1.00 1 3 628.62286 1883.85404 -4.61 27.57 3131 3131 MS2 28/68 Linfeng_091611_rIgG_4.raw High VFNVFcLYGNVEK IPI:IPI00465225.1 3 1 CID C6(Carbamidomethyl) 62.75 5.14 1.00 1 2 794.89532 1588.78337 0.31 43.73 10200 10200 MS2 21/24 Linfeng_081211_IgG_5.raw High ASLNGADIYSGccTLK 3 0 CID "C12(Carbamidomethyl), C13(Carbamidomethyl)" 117.57 5.03 1.00 1 2 865.39392 1729.78057 -4.56 30.65 3547 3547 MS2 19/30 Linfeng_091611_rIgG_4.raw High SKPGAAMVEmADGYAVDR IPI:IPI00027834.3 4 1 CID M10(Oxidation) 40.56 5.02 1.00 1 3 628.62311 1883.85477 -4.22 27.96 3128 3128 MS2 26/68 Linfeng_091811_SIN3A_4.raw High SKPGAAmVEmADGYAVDR 4 0 CID "M7(Oxidation), M10(Oxidation)" 54.45 4.99 1.00 1 3 633.95514 1899.85086 -3.57 23.26 2535 2535 MS2 26/68 Linfeng_091611_rIgG_4.raw High QPAImPGQSYGLEDGScSYK IPI:IPI00465225.1 5 1 CID "M5(Oxidation), C17(Carbamidomethyl)" 54.52 4.89 1.00 1 3 735.32751 2203.96799 2.02 30.18 6112 6112 MS2 29/76 Linfeng_081211_IgG_4.raw High ASLNGADIYSGccTLK IPI:IPI00465225.1 3 1 CID "C12(Carbamidomethyl), C13(Carbamidomethyl)" 131.64 4.73 1.00 1 2 865.39508 1729.78288 -3.22 31.23 6353 6353 MS2 18/30 Linfeng_081211_IgG_5.raw High SKPGAAmVEmADGYAVDR IPI:IPI00027834.3 4 1 CID "M7(Oxidation), M10(Oxidation)" 62.83 4.44 1.00 1 3 633.95630 1899.85434 -1.74 23.55 2515 2515 MS2 25/68 Linfeng_091811_SIN3A_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR IPI:IPI00465225.1 3 1 CID 81.80 4.41 1.00 1 3 964.09247 2890.26285 0.16 29.80 5988 5988 MS2 28/100 Linfeng_081211_IgG_4.raw High ASLNGADIYSGccTLK IPI:IPI00027834.3 3 1 CID "C12(Carbamidomethyl), C13(Carbamidomethyl)" 69.30 4.27 1.00 1 2 865.39563 1729.78398 -2.58 31.04 3545 3545 MS2 17/30 Linfeng_091811_SIN3A_4.raw High AITHLNNNFmFGQK IPI:IPI00465225.1 4 1 CID M10(Oxidation) 15.56 4.19 1.00 1 3 550.93951 1650.80399 -1.07 30.09 5974 5974 MS2 24/52 Linfeng_081211_IgG_5.raw High SSSGLLEWESK IPI:IPI00465225.1 5 1 CID 53.09 3.87 1.00 1 2 611.80084 1222.59441 -0.53 34.07 7409 7409 MS2 14/20 Linfeng_081211_IgG_4.raw High VFNVFcLYGNVEK IPI:IPI00465225.1 3 1 CID C6(Carbamidomethyl) 36.19 3.84 1.00 1 2 794.89551 1588.78374 0.54 43.86 10259 10259 MS2 13/24 Linfeng_081211_IgG_4.raw High ASLNGADIYSGccTLK IPI:IPI00465225.1 3 1 CID "C12(Carbamidomethyl), C13(Carbamidomethyl)" 105.62 3.84 1.00 1 2 865.39667 1729.78606 -1.38 31.06 6426 6426 MS2 13/30 Linfeng_081211_IgG_4.raw High QPAImPGQSYGLEDGScSYK IPI:IPI00465225.1 5 1 CID "M5(Oxidation), C17(Carbamidomethyl)" 90.61 3.74 1.00 1 2 1102.48352 2203.95976 -1.71 30.21 6021 6021 MS2 16/38 Linfeng_081211_IgG_5.raw High SSSGLLEWESK IPI:IPI00465225.1 5 1 CID 52.05 3.73 1.00 1 2 611.80078 1222.59429 -0.63 34.26 7576 7576 MS2 14/20 Linfeng_081211_IgG_6.raw High SSSGLLEWESK IPI:IPI00465225.1 5 1 CID 50.23 3.61 1.00 1 2 611.80023 1222.59319 -1.53 33.83 7365 7365 MS2 14/20 Linfeng_081211_IgG_10.raw High SSSGLLEWESK IPI:IPI00465225.1 5 1 CID 50.62 3.59 1.00 1 2 611.80042 1222.59355 -1.23 34.22 7555 7555 MS2 14/20 Linfeng_081211_IgG_7.raw High SSSGLLEWESK IPI:IPI00465225.1 5 1 CID 51.28 3.51 1.00 1 2 611.79980 1222.59233 -2.23 34.07 7396 7396 MS2 14/20 Linfeng_081211_IgG_5.raw IPI:IPI00329306.3 529 57.8 7.71 "Keratin, type II cytoskeletal 74" 7.94 25 4 265.99 7.94 14 4 154.48 2.27 5 1 170.92 2.27 6 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLEQQNQVLETK 9 0 CID 61.23 5.57 1.00 1 2 738.88550 1476.76372 -3.81 28.69 3198 3198 MS2 20/22 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLETK 9 0 CID 56.68 5.27 1.00 1 2 738.88452 1476.76177 -5.13 28.53 3062 3062 MS2 20/22 Linfeng_091611_rIgG_1.raw High FLEQQNQVLETK 9 0 CID 19.85 5.25 1.00 1 2 738.88477 1476.76225 -4.80 28.71 3156 3156 MS2 18/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLETK 9 0 CID 30.00 5.20 1.00 1 2 738.88513 1476.76299 -4.30 28.49 3160 3160 MS2 20/22 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLETK 9 0 CID 68.14 5.16 1.00 1 2 738.88544 1476.76360 -3.89 28.82 3347 3347 MS2 20/22 Linfeng_091811_SIN3A_5.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 24.45 5.15 1.00 1 2 738.88531 1476.76335 -4.05 29.05 5792 5792 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLETK 9 0 CID 32.57 5.13 1.00 1 2 738.88458 1476.76189 -5.05 28.73 2994 2994 MS2 18/22 Linfeng_091811_SIN3A_7.raw High FLEQQNQVLETK 9 0 CID 24.45 5.06 1.00 1 2 738.88489 1476.76250 -4.63 28.51 3060 3060 MS2 20/22 Linfeng_091611_rIgG_9.raw High FLEQQNQVLETK 9 0 CID 38.79 5.00 1.00 1 2 738.88470 1476.76213 -4.88 28.47 3060 3060 MS2 20/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLETK 9 0 CID 68.87 4.89 1.00 1 2 738.88666 1476.76604 -2.24 28.68 3160 3160 MS2 20/22 Linfeng_091611_rIgG_7.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 17.72 4.70 1.00 1 2 738.88702 1476.76677 -1.74 29.32 5808 5808 MS2 18/22 Linfeng_081211_IgG_7.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 27.54 4.67 1.00 1 2 738.88574 1476.76421 -3.48 28.83 5840 5840 MS2 17/22 Linfeng_081211_IgG_8.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 31.96 4.63 1.00 1 2 738.88721 1476.76714 -1.49 29.31 5686 5686 MS2 19/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLETK 9 0 CID 57.91 4.62 1.00 1 2 738.88647 1476.76567 -2.48 28.69 2706 2706 MS2 18/22 Linfeng_091611_rIgG_3.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 44.71 4.56 1.00 1 2 738.88477 1476.76225 -4.80 31.23 6714 6714 MS2 17/22 Linfeng_081211_IgG_3.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 14.07 4.35 1.00 1 2 738.88727 1476.76726 -1.41 29.06 5799 5799 MS2 16/22 Linfeng_081211_IgG_10.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 52.77 4.16 1.00 1 2 738.88708 1476.76689 -1.66 35.30 5114 5114 MS2 14/22 Linfeng_081211_IgG_1.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High FLEQQNQVLETK 9 0 CID 24.87 4.15 1.00 1 2 738.88580 1476.76433 -3.39 29.45 3314 3314 MS2 15/22 Linfeng_091811_SIN3A_6.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 23.92 4.04 1.00 1 2 738.88727 1476.76726 -1.41 30.42 6250 6250 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 10.46 4.00 1.00 1 2 738.88684 1476.76641 -1.99 30.53 6139 6139 MS2 15/22 Linfeng_081211_IgG_5.raw High LALDmEIATYR IPI:IPI00329306.3;IPI:IPI00793641.1 6 2 CID M5(Oxidation) 62.29 3.95 1.00 1 2 656.33459 1311.66191 0.41 34.30 7469 7469 MS2 14/20 Linfeng_081211_IgG_5.raw High AEAEALYQTK IPI:IPI00329306.3;IPI:IPI00477227.3;IPI:IPI00797452.2;IPI:IPI00942512.1 11 4 CID 57.82 3.76 1.00 1 2 562.28387 1123.56047 -2.27 24.63 4520 4520 MS2 15/18 Linfeng_081211_IgG_3.raw High FLEQQNQVLETK IPI:IPI00329306.3;IPI:IPI00793641.1 9 2 CID 18.39 3.70 1.00 1 2 738.88647 1476.76567 -2.48 29.69 6146 6146 MS2 13/22 Linfeng_081211_IgG_8.raw IPI:IPI00398625.5 2850 282.2 10.04 Hornerin 12.91 33 11 238.13 10.18 14 10 125.51 7.93 12 4 95.89 8.60 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High HGSGSGQSSSYSPYGSGSGWSSSR IPI:IPI00398625.5 1 1 CID 90.73 6.60 1.00 1 3 783.66187 2348.97104 -2.25 24.54 2627 2627 MS2 35/92 Linfeng_091811_SIN3A_1.raw High HGSSSGSSSSYGQHGSGSR IPI:IPI00398625.5 1 1 CID 108.56 6.59 1.00 1 3 603.58942 1808.75370 -0.33 1.04 88 88 MS2 28/72 Linfeng_091811_SIN3A_5.raw High HGSGSGQSSSYGPYGSGSGWSSSR IPI:IPI00398625.5 1 1 CID 63.34 6.43 1.00 1 3 773.65912 2318.96280 -1.28 25.90 4877 4877 MS2 31/92 Linfeng_081211_IgG_6.raw High HGSGSGQSSSYGPYGSGSGWSSSR 1 0 CID 56.29 6.38 1.00 1 3 773.65839 2318.96061 -2.23 24.77 2565 2565 MS2 32/92 Linfeng_091611_rIgG_1.raw High HGSGSGQSSSYSPYGSGSGWSSSR 1 0 CID 70.13 6.38 1.00 1 3 783.66205 2348.97159 -2.02 24.47 2524 2524 MS2 34/92 Linfeng_091611_rIgG_1.raw High HGSSSGSSSSYGQHGSGSR 1 0 CID 70.33 6.20 1.00 1 3 603.59076 1808.75772 1.89 1.48 123 123 MS2 29/72 Linfeng_091611_rIgG_8.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR 1 0 CID 108.46 6.03 1.00 1 4 620.01111 2477.02260 0.65 14.98 1214 1214 MS2 35/150 Linfeng_091611_rIgG_9.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR 1 0 CID 47.56 6.01 1.00 1 4 620.01056 2477.02041 -0.24 13.83 1088 1088 MS2 31/150 Linfeng_091611_rIgG_1.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR IPI:IPI00398625.5 1 1 CID 88.09 6.00 1.00 1 4 620.00958 2477.01650 -1.82 14.99 1415 1415 MS2 37/150 Linfeng_091811_SIN3A_5.raw High HGSGSGQSSSYGPYGSGSGWSSSR 1 0 CID 60.34 5.98 1.00 1 3 773.65894 2318.96225 -1.52 24.74 2560 2560 MS2 34/92 Linfeng_091611_rIgG_9.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR IPI:IPI00398625.5 1 1 CID 96.42 5.88 1.00 1 4 620.00989 2477.01772 -1.32 14.76 1259 1259 MS2 38/150 Linfeng_091811_SIN3A_1.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR 1 0 CID 60.50 5.81 1.00 1 4 620.00879 2477.01333 -3.10 3.24 316 316 MS2 29/150 Linfeng_091611_rIgG_2.raw High HGSGSGQSSSYSPYGSGSGWSSSR 1 0 CID 42.84 5.47 1.00 1 3 783.66254 2348.97306 -1.39 24.55 2534 2534 MS2 31/92 Linfeng_091611_rIgG_9.raw High HGSSSGSSSSYGQHGSGSR 1 0 CID 99.70 5.38 1.00 1 3 603.58978 1808.75479 0.27 2.36 189 189 MS2 34/72 Linfeng_091611_rIgG_1.raw High HGSGSGQSSSYGPYGSGSGWSSSR IPI:IPI00398625.5 1 1 CID 63.27 5.34 1.00 1 3 773.65741 2318.95768 -3.49 24.82 2666 2666 MS2 31/92 Linfeng_091811_SIN3A_1.raw High HGSGSGQSSSYGPYGSGSGWSSSR 1 0 CID 32.72 5.28 1.00 1 3 773.65759 2318.95823 -3.25 24.83 2568 2568 MS2 24/92 Linfeng_091611_rIgG_2.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR 1 0 CID 114.53 5.11 1.00 1 4 620.01044 2477.01992 -0.44 14.83 1255 1255 MS2 36/150 Linfeng_091611_rIgG_7.raw High GEQHGSSSGSSSSYGQHGSGSR IPI:IPI00398625.5 1 1 CID 67.45 5.09 1.00 1 3 708.29962 2122.88431 3.47 11.94 907 907 MS2 30/84 Linfeng_081211_IgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR IPI:IPI00398625.5 1 1 CID 63.55 5.00 1.00 1 4 620.00879 2477.01333 -3.10 0.99 144 144 MS2 36/150 Linfeng_091811_SIN3A_10.raw High HGSGSGQSSSYSPYGSGSGWSSSR IPI:IPI00398625.5 1 1 CID 40.04 4.92 1.00 1 3 783.66553 2348.98203 2.43 25.33 4601 4601 MS2 23/92 Linfeng_081211_IgG_4.raw High HGSSSGSSSSYGQHGSGSR 1 0 CID 49.94 4.68 1.00 1 3 603.58923 1808.75315 -0.64 1.15 96 96 MS2 28/72 Linfeng_091611_rIgG_9.raw High HGSSSGSSSSYGQHGSGSR IPI:IPI00398625.5 1 1 CID 67.23 4.68 1.00 1 3 603.59198 1808.76139 3.92 11.59 749 749 MS2 26/72 Linfeng_081211_IgG_4.raw High SEQHGSSSGSSSSYGQHGSGSR IPI:IPI00398625.5 1 1 CID 89.18 4.42 1.00 1 3 718.30322 2152.89511 3.53 11.98 923 923 MS2 28/84 Linfeng_081211_IgG_6.raw High GPYESGSGHSSGLGHQESR IPI:IPI00398625.5 1 1 CID 36.54 4.41 1.00 1 3 643.62183 1928.85093 1.40 16.95 2167 2167 MS2 23/72 Linfeng_081211_IgG_8.raw High GPYESGSGHSSGLGHQESR IPI:IPI00398625.5 1 1 CID 58.33 4.33 1.00 1 3 643.61920 1928.84305 -2.68 16.19 1458 1458 MS2 23/72 Linfeng_091811_SIN3A_1.raw High GSGSGQSPSYGR IPI:IPI00398625.5 1 1 CID 49.27 3.96 1.00 1 2 570.25677 1139.50627 -1.19 15.77 1822 1822 MS2 16/22 Linfeng_081211_IgG_6.raw High GSGSGQSPSYGR IPI:IPI00398625.5 1 1 CID 44.55 3.95 1.00 1 2 570.25781 1139.50835 0.63 17.15 1891 1891 MS2 17/22 Linfeng_081211_IgG_2.raw High YGQQGSGSGQSPSR IPI:IPI00398625.5 1 1 CID 60.46 3.91 1.00 1 2 698.31647 1395.62566 0.62 15.09 1584 1584 MS2 18/26 Linfeng_081211_IgG_5.raw High YGQQGSGSGQSPSR IPI:IPI00398625.5 1 1 CID 66.43 3.84 1.00 1 2 698.31671 1395.62615 0.97 15.81 1565 1565 MS2 17/26 Linfeng_081211_IgG_2.raw High HGSGSGQSSSYGPYR IPI:IPI00398625.5 1 1 CID 38.99 3.81 1.00 1 2 763.83539 1526.66350 1.05 18.61 2662 2662 MS2 18/28 Linfeng_081211_IgG_6.raw High YGQQGSGSGQSPSR IPI:IPI00398625.5 1 1 CID 94.74 3.73 1.00 1 2 698.31348 1395.61968 -3.66 14.64 1086 1086 MS2 19/26 Linfeng_081211_IgG_1.raw High YGQQGSGSGQSPSR IPI:IPI00398625.5 1 1 CID 32.58 3.61 1.00 1 2 698.31702 1395.62676 1.41 14.48 1566 1566 MS2 15/26 Linfeng_081211_IgG_6.raw High GPYESGSGHSSGLGHR IPI:IPI00398625.5 1 1 CID 83.12 3.57 1.00 1 2 792.86145 1584.71562 0.39 16.51 2038 2038 MS2 19/30 Linfeng_081211_IgG_8.raw IPI:IPI00908896.2 429 47.1 6.34 "cDNA FLJ54533, highly similar to Heterogeneous nuclear ribonucleoprotein H" 21.68 22 6 117.81 21.68 14 6 51.57 11.66 4 3 48.71 14.69 4 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High STGEAFVQFASQEIAEK 7 0 CID 83.08 5.88 1.00 1 2 921.44641 1841.88555 -3.33 40.72 4811 4811 MS2 21/32 Linfeng_091611_rIgG_5.raw High STGEAFVQFASQEIAEK 7 0 CID 77.95 5.85 1.00 1 2 921.44739 1841.88750 -2.27 40.95 4975 4975 MS2 23/32 Linfeng_091811_SIN3A_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 74.93 5.73 1.00 1 2 998.99060 1996.97392 -1.24 46.73 5575 5575 MS2 19/32 Linfeng_091611_rIgG_5.raw High STGEAFVQFASQEIAEK IPI:IPI00908896.2 7 1 CID 92.94 5.72 1.00 1 2 921.44855 1841.88982 -1.01 40.40 9311 9311 MS2 22/32 Linfeng_081211_IgG_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 49.66 5.62 1.00 1 3 666.33051 1996.97696 0.29 46.60 5560 5560 MS2 28/64 Linfeng_091611_rIgG_5.raw High HTGPNSPDTANDGFVR 13 0 CID 37.67 5.54 1.00 1 3 562.25903 1684.76255 -2.92 22.06 2352 2352 MS2 32/60 Linfeng_091611_rIgG_5.raw High ATENDIYNFFSPLNPVR 4 0 CID 42.00 5.46 1.00 1 3 666.32941 1996.97367 -1.36 46.88 5738 5738 MS2 31/64 Linfeng_091811_SIN3A_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 67.33 5.40 1.00 1 2 998.99097 1996.97466 -0.87 46.60 10975 10975 MS2 18/32 Linfeng_081211_IgG_5.raw High STGEAFVQFASQEIAEK IPI:IPI00908896.2 7 1 CID 67.82 5.40 1.00 1 2 921.45038 1841.89348 0.98 40.39 9553 9553 MS2 21/32 Linfeng_081211_IgG_10.raw High STGEAFVQFASQEIAEK IPI:IPI00908896.2 7 1 CID 76.49 5.15 1.00 1 2 921.44965 1841.89202 0.19 41.86 9963 9963 MS2 22/32 Linfeng_081211_IgG_6.raw High HTGPNSPDTANDGFVR IPI:IPI00908896.2 13 1 CID 37.33 5.11 1.00 1 3 562.25970 1684.76456 -1.72 23.05 3735 3735 MS2 27/60 Linfeng_081211_IgG_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 82.94 4.78 1.00 1 2 998.99249 1996.97771 0.66 46.95 11063 11063 MS2 14/32 Linfeng_081211_IgG_5.raw High STGEAFVQFASQEIAEK IPI:IPI00908896.2 7 1 CID 52.27 4.67 1.00 1 2 921.45068 1841.89409 1.31 40.81 9756 9756 MS2 16/32 Linfeng_081211_IgG_7.raw High EGRPSGEAFVELESEDEVK IPI:IPI00908896.2 13 1 CID 40.43 4.67 1.00 1 3 702.99792 2106.97922 -1.65 32.65 6860 6860 MS2 27/72 Linfeng_081211_IgG_5.raw High HTGPNSPDTANDGFVR 13 0 CID 44.01 4.58 1.00 1 3 562.25861 1684.76126 -3.68 22.03 2409 2409 MS2 24/60 Linfeng_091811_SIN3A_5.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 61.64 4.56 1.00 1 3 666.33044 1996.97678 0.19 46.64 10984 10984 MS2 29/64 Linfeng_081211_IgG_5.raw High GLPWScSADEVQR IPI:IPI00908896.2 15 1 CID C6(Carbamidomethyl) 88.27 4.34 1.00 1 2 752.84558 1504.68389 -0.72 32.69 7028 7028 MS2 18/24 Linfeng_081211_IgG_6.raw High STGEAFVQFASQEIAEK IPI:IPI00908896.2 7 1 CID 42.38 4.13 1.00 1 3 614.63574 1841.89267 0.54 41.96 9994 9994 MS2 26/64 Linfeng_081211_IgG_6.raw High ATENDIYNFFSPLNPVR IPI:IPI00003881.5;IPI:IPI00908896.2 4 2 CID 67.25 4.12 1.00 1 3 666.33179 1996.98081 2.21 47.39 11595 11595 MS2 23/64 Linfeng_081211_IgG_6.raw High GLPWScSADEVQR 15 0 CID C6(Carbamidomethyl) 94.63 4.12 1.00 1 2 752.84332 1504.67937 -3.73 32.27 3818 3818 MS2 20/24 Linfeng_091811_SIN3A_5.raw High HTGPNSPDTANDGFVR IPI:IPI00908896.2 13 1 CID 54.83 3.59 1.00 1 2 842.88635 1684.76543 -1.21 23.06 3737 3737 MS2 16/30 Linfeng_081211_IgG_5.raw High SNNVEmDWVLK IPI:IPI00908896.2 12 1 CID M6(Oxidation) 34.63 3.54 1.00 1 2 675.82068 1350.63408 -1.34 33.72 7259 7259 MS2 14/20 Linfeng_081211_IgG_5.raw IPI:IPI00006379.1 529 59.5 8.92 Nucleolar protein 58 31.00 33 11 128.70 24.76 15 9 115.86 23.82 11 8 75.04 11.72 7 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VEEEEEEKVAEEEETSVK IPI:IPI00006379.1 1 1 CID 105.34 7.00 1.00 1 3 707.98853 2121.95102 -2.28 27.30 5002 5002 MS2 31/68 Linfeng_081211_IgG_5.raw High FQDTAEALAAFTALMEGK IPI:IPI00006379.1 1 1 CID 90.10 6.88 1.00 1 3 638.64801 1913.92948 -1.03 52.64 6349 6349 MS2 30/68 Linfeng_091611_rIgG_4.raw High FQDTAEALAAFTALMEGK 1 0 CID 101.78 6.71 1.00 1 2 957.46979 1913.93230 0.44 53.14 6523 6523 MS2 21/34 Linfeng_091811_SIN3A_5.raw High FQDTAEALAAFTALmEGK IPI:IPI00006379.1 1 1 CID M15(Oxidation) 95.65 6.60 1.00 1 3 643.97852 1929.92099 -2.78 44.86 5389 5389 MS2 37/68 Linfeng_091611_rIgG_4.raw High FQDTAEALAAFTALmEGK 1 0 CID M15(Oxidation) 73.98 6.48 1.00 1 3 643.97864 1929.92136 -2.59 45.18 5373 5373 MS2 35/68 Linfeng_091811_SIN3A_4.raw High FQDTAEALAAFTALMEGK IPI:IPI00006379.1 1 1 CID 127.29 6.33 1.00 1 2 957.46893 1913.93059 -0.45 52.65 6350 6350 MS2 26/34 Linfeng_091611_rIgG_4.raw High FQDTAEALAAFTALMEGK 1 0 CID 89.41 6.15 1.00 1 3 638.64795 1913.92929 -1.13 53.04 6215 6215 MS2 29/68 Linfeng_091811_SIN3A_4.raw High YDAFGEDSSSAmGVENR 1 0 CID M12(Oxidation) 146.54 5.72 1.00 1 2 925.87622 1850.74516 -2.52 27.61 3081 3081 MS2 25/32 Linfeng_091811_SIN3A_4.raw High YGLIYHASLVGQTSPK IPI:IPI00006379.1 1 1 CID 88.68 5.71 1.00 1 3 578.64319 1733.91501 -4.11 31.00 3593 3593 MS2 30/60 Linfeng_091611_rIgG_4.raw High FQDTAEALAAFTALMEGK 1 0 CID 43.02 5.65 1.00 1 3 638.64893 1913.93222 0.40 53.06 6513 6513 MS2 25/68 Linfeng_091811_SIN3A_5.raw High FQDTAEALAAFTALMEGK IPI:IPI00006379.1 1 1 CID 76.30 5.56 1.00 1 2 957.47162 1913.93596 2.36 52.30 12257 12257 MS2 20/34 Linfeng_081211_IgG_5.raw High FQDTAEALAAFTALmEGK IPI:IPI00006379.1 1 1 CID M15(Oxidation) 24.82 5.35 1.00 1 3 643.98029 1929.92630 -0.03 44.29 10354 10354 MS2 24/68 Linfeng_081211_IgG_5.raw High YDAFGEDSSSAmGVENR IPI:IPI00006379.1 1 1 CID M12(Oxidation) 129.70 5.32 1.00 1 2 925.87708 1850.74687 -1.60 28.18 5282 5282 MS2 22/32 Linfeng_081211_IgG_5.raw High KIEQVDKEDEITEK IPI:IPI00006379.1 1 1 CID 68.51 5.23 1.00 1 3 568.62616 1703.86393 -3.49 19.72 2042 2042 MS2 26/52 Linfeng_091611_rIgG_4.raw High mmAIAPNVTVMVGELVGAR IPI:IPI00006379.1 2 1 CID "M1(Oxidation), M2(Oxidation)" 71.78 5.21 1.00 1 3 664.34119 1991.00901 -1.70 47.16 5673 5673 MS2 31/72 Linfeng_091611_rIgG_4.raw High YDAFGEDSSSAmGVENR IPI:IPI00006379.1 1 1 CID M12(Oxidation) 139.55 4.82 1.00 1 2 925.87555 1850.74382 -3.25 27.30 3093 3093 MS2 26/32 Linfeng_091611_rIgG_4.raw High YGLIYHASLVGQTSPK IPI:IPI00006379.1 1 1 CID 80.28 4.69 1.00 1 3 578.64453 1733.91904 -1.79 31.84 6563 6563 MS2 28/60 Linfeng_081211_IgG_5.raw High KIEQVDKEDEITEK 1 0 CID 44.96 4.65 1.00 1 3 568.62610 1703.86374 -3.60 20.15 2036 2036 MS2 25/52 Linfeng_091811_SIN3A_4.raw High MmAIAPNVTVMVGELVGAR IPI:IPI00006379.1 2 1 CID M2(Oxidation) 39.94 4.58 1.00 1 3 659.00909 1975.01273 -2.40 48.99 5901 5901 MS2 23/72 Linfeng_091611_rIgG_4.raw High LIAHAGSLLNLAK IPI:IPI00006379.1 1 1 CID 99.04 4.47 1.00 1 2 660.90137 1320.79546 -3.33 32.38 3774 3774 MS2 20/24 Linfeng_091611_rIgG_4.raw High LIAHAGSLLNLAK 1 0 CID 39.13 4.41 1.00 1 2 660.90143 1320.79558 -3.24 32.77 3770 3770 MS2 14/24 Linfeng_091811_SIN3A_4.raw High FQDTAEALAAFTALmEGK IPI:IPI00006379.1 1 1 CID M15(Oxidation) 2.77 4.34 1.00 1 2 965.45862 1929.90996 -8.50 44.34 10369 10369 MS2 8/34 Linfeng_081211_IgG_5.raw High TYDPSGDSTLPTcSK IPI:IPI00006379.1 1 1 CID C13(Carbamidomethyl) 103.63 4.24 1.00 1 2 814.85669 1628.70610 -2.94 24.64 2730 2730 MS2 23/28 Linfeng_091611_rIgG_4.raw High YGLIYHASLVGQTSPK IPI:IPI00006379.1 1 1 CID 49.64 4.23 1.00 1 3 578.64594 1733.92325 0.64 31.95 6711 6711 MS2 20/60 Linfeng_081211_IgG_4.raw High LSELLPEEVEAEVK IPI:IPI00006379.1 2 1 CID 78.43 4.15 1.00 1 2 792.91815 1584.82903 -4.89 38.14 4523 4523 MS2 20/26 Linfeng_091611_rIgG_4.raw High TYDPSGDSTLPTcSK IPI:IPI00006379.1 1 1 CID C13(Carbamidomethyl) 83.55 4.00 1.00 1 2 814.85699 1628.70671 -2.57 25.57 4458 4458 MS2 21/28 Linfeng_081211_IgG_5.raw High LIAHAGSLLNLAK IPI:IPI00006379.1 1 1 CID 73.93 3.84 1.00 1 2 660.90283 1320.79839 -1.12 33.01 7003 7003 MS2 17/24 Linfeng_081211_IgG_5.raw High LSELLPEEVEAEVK IPI:IPI00006379.1 2 1 CID 86.23 3.78 1.00 1 2 792.92151 1584.83574 -0.66 38.16 8671 8671 MS2 19/26 Linfeng_081211_IgG_5.raw High TQLYEYLQNR IPI:IPI00006379.1 2 1 CID 53.82 3.78 1.00 1 2 664.33606 1327.66484 0.55 33.54 7236 7236 MS2 14/18 Linfeng_081211_IgG_4.raw High TQLYEYLQNR IPI:IPI00006379.1 2 1 CID 72.01 3.77 1.00 1 2 664.33459 1327.66191 -1.66 33.53 7186 7186 MS2 15/18 Linfeng_081211_IgG_5.raw High IISDNLTYcK IPI:IPI00006379.1 2 1 CID C9(Carbamidomethyl) 51.12 3.72 1.00 1 2 613.80707 1226.60686 -1.41 28.30 5326 5326 MS2 16/18 Linfeng_081211_IgG_5.raw High IISDNLTYcK IPI:IPI00006379.1 2 1 CID C9(Carbamidomethyl) 31.39 3.57 1.00 1 2 613.80731 1226.60735 -1.01 29.06 5912 5912 MS2 15/18 Linfeng_081211_IgG_3.raw High TQLYEYLQNR IPI:IPI00006379.1 2 1 CID 61.15 3.55 1.00 1 2 664.33521 1327.66313 -0.74 33.68 7370 7370 MS2 15/18 Linfeng_081211_IgG_6.raw IPI:IPI00220740.1 265 29.4 4.61 Isoform 2 of Nucleophosmin 42.64 43 7 142.19 25.28 15 4 122.38 42.64 15 6 133.87 42.64 13 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TVSLGAGAKDELHIVEAEAmNYEGSPIK 3 0 CID M20(Oxidation) 108.86 8.38 1.00 1 3 982.48853 2945.45102 -1.77 39.43 4635 4635 MS2 38/108 Linfeng_091611_rIgG_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK IPI:IPI00220740.1 3 1 CID 300.00 7.08 1.00 1 3 1373.48560 4118.44223 -3.30 29.13 3271 3271 MS2 34/140 Linfeng_091811_SIN3A_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK IPI:IPI00220740.1 3 1 CID 188.93 6.88 1.00 1 4 1062.38672 4246.52505 -6.07 26.76 2947 2947 MS2 37/216 Linfeng_091811_SIN3A_6.raw High LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK 3 0 CID 215.65 6.86 1.00 1 4 1062.38977 4246.53725 -3.19 26.80 2967 2967 MS2 34/216 Linfeng_091611_rIgG_6.raw High DELHIVEAEAmNYEGSPIK 3 0 CID M11(Oxidation) 95.80 6.72 1.00 1 3 721.00641 2161.00467 -3.33 38.57 4523 4523 MS2 33/72 Linfeng_091611_rIgG_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 119.05 6.66 1.00 1 2 1122.10693 2243.20659 -1.76 45.92 5461 5461 MS2 24/40 Linfeng_091611_rIgG_6.raw High DELHIVEAEAmNYEGSPIK IPI:IPI00220740.1 3 1 CID M11(Oxidation) 127.15 6.44 1.00 1 3 721.00586 2161.00302 -4.10 38.72 4523 4523 MS2 34/72 Linfeng_091811_SIN3A_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 58.03 6.25 1.00 1 3 748.40759 2243.20823 -1.03 45.86 5045 5045 MS2 30/80 Linfeng_091611_rIgG_10.raw High DELHIVEAEAMNYEGSPIK IPI:IPI00220740.1 3 1 CID 88.67 6.20 1.00 1 3 715.67535 2145.01151 -2.54 40.83 4794 4794 MS2 33/72 Linfeng_091811_SIN3A_6.raw High mSVQPTVSLGGFEITPPVVLR IPI:IPI00220740.1 3 1 CID M1(Oxidation) 105.69 6.06 1.00 1 3 748.40784 2243.20896 -0.70 46.17 5362 5362 MS2 30/80 Linfeng_091811_SIN3A_9.raw High DELHIVEAEAMNYEGSPIK 3 0 CID 72.26 5.65 1.00 1 3 715.67505 2145.01059 -2.97 40.59 4786 4786 MS2 34/72 Linfeng_091611_rIgG_6.raw High mTDQEAIQDLWQWR 2 0 CID M1(Oxidation) 52.89 5.57 1.00 1 3 612.61615 1835.83390 -2.34 43.76 5191 5191 MS2 28/52 Linfeng_091611_rIgG_6.raw High mSVQPTVSLGGFEITPPVVLR IPI:IPI00220740.1 3 1 CID M1(Oxidation) 102.74 5.45 1.00 1 3 748.40771 2243.20859 -0.87 45.86 5427 5427 MS2 28/80 Linfeng_091811_SIN3A_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 137.14 5.42 1.00 1 3 748.40820 2243.21006 -0.21 45.60 5421 5421 MS2 32/80 Linfeng_091611_rIgG_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 104.36 5.41 1.00 1 3 748.40765 2243.20841 -0.95 45.79 5365 5365 MS2 30/80 Linfeng_091611_rIgG_7.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 122.45 5.36 1.00 1 3 748.40765 2243.20841 -0.95 45.86 5282 5282 MS2 31/80 Linfeng_091611_rIgG_9.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 115.05 5.34 1.00 1 2 1122.10706 2243.20683 -1.65 46.49 11249 11249 MS2 19/40 Linfeng_081211_IgG_8.raw High mTDQEAIQDLWQWR IPI:IPI00220740.1 2 1 CID M1(Oxidation) 39.72 5.33 1.00 1 3 612.61554 1835.83207 -3.34 43.98 5193 5193 MS2 29/52 Linfeng_091811_SIN3A_6.raw High TVSLGAGAKDELHIVEAEAmNYEGSPIK IPI:IPI00220740.1 3 1 CID M20(Oxidation) 43.94 5.33 1.00 1 4 737.11810 2945.45058 -1.92 39.58 4634 4634 MS2 38/162 Linfeng_091811_SIN3A_6.raw High mSVQPTVSLGGFEITPPVVLR IPI:IPI00220740.1 3 1 CID M1(Oxidation) 87.10 5.32 1.00 1 3 748.40668 2243.20548 -2.25 46.28 5323 5323 MS2 31/80 Linfeng_091811_SIN3A_8.raw High MTDQEAIQDLWQWR IPI:IPI00220740.1 2 1 CID 38.45 5.24 1.00 1 3 607.28485 1819.84000 -1.80 46.22 5472 5472 MS2 30/52 Linfeng_091811_SIN3A_6.raw High MTDQEAIQDLWQWR 2 0 CID 44.04 5.21 1.00 1 3 607.28479 1819.83982 -1.90 45.94 5464 5464 MS2 31/52 Linfeng_091611_rIgG_6.raw High VDNDENEHQLSLR IPI:IPI00220740.1 4 1 CID 100.82 4.94 1.00 1 2 784.86639 1568.72551 -2.86 23.15 2450 2450 MS2 19/24 Linfeng_091811_SIN3A_6.raw High MSVQPTVSLGGFEITPPVVLR IPI:IPI00220740.1 3 1 CID 29.67 4.89 1.00 1 3 743.07684 2227.21598 0.16 46.94 5561 5561 MS2 28/80 Linfeng_091811_SIN3A_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 30.24 4.80 1.00 1 3 748.41089 2243.21811 3.38 45.12 11013 11013 MS2 18/80 Linfeng_081211_IgG_10.raw High TVSLGAGAKDELHIVEAEAmNYEGSPIK 3 0 CID M20(Oxidation) 55.50 4.80 1.00 1 4 737.11786 2945.44961 -2.25 39.34 4625 4625 MS2 35/162 Linfeng_091611_rIgG_6.raw High TVSLGAGAKDELHIVEAEAmNYEGSPIK 3 0 CID M20(Oxidation) 53.34 4.78 1.00 1 4 737.11792 2945.44985 -2.16 39.39 4551 4551 MS2 35/162 Linfeng_091611_rIgG_7.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 58.17 4.63 1.00 1 2 1122.11047 2243.21367 1.40 45.14 11018 11018 MS2 21/40 Linfeng_081211_IgG_10.raw High MSVQPTVSLGGFEITPPVVLR 3 0 CID 36.45 4.53 1.00 1 3 743.07690 2227.21616 0.24 46.66 5553 5553 MS2 29/80 Linfeng_091611_rIgG_6.raw High MTDQEAIQDLWQWR IPI:IPI00220740.1 2 1 CID 43.95 4.50 1.00 1 3 607.28387 1819.83707 -3.41 46.31 5291 5291 MS2 26/52 Linfeng_091811_SIN3A_10.raw High VDNDENEHQLSLR 4 0 CID 76.04 4.48 1.00 1 2 784.86774 1568.72820 -1.15 23.45 4169 4169 MS2 15/24 Linfeng_081211_IgG_6.raw High DELHIVEAEAmNYEGSPIK 3 0 CID M11(Oxidation) 55.64 4.44 1.00 1 3 721.00824 2161.01017 -0.79 39.14 9132 9132 MS2 24/72 Linfeng_081211_IgG_6.raw High VDNDENEHQLSLR 4 0 CID 102.99 4.40 1.00 1 2 784.86700 1568.72673 -2.08 22.93 2431 2431 MS2 18/24 Linfeng_091611_rIgG_6.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 78.47 4.37 1.00 1 3 748.40710 2243.20676 -1.68 46.46 11241 11241 MS2 27/80 Linfeng_081211_IgG_8.raw High mTDQEAIQDLWQWR 2 0 CID M1(Oxidation) 36.00 4.24 1.00 1 2 918.42535 1835.84343 2.85 43.41 10500 10500 MS2 14/26 Linfeng_081211_IgG_10.raw High MSVQPTVSLGGFEITPPVVLR 3 0 CID 88.41 4.17 1.00 1 2 1114.11182 2227.21636 0.33 47.23 11554 11554 MS2 22/40 Linfeng_081211_IgG_6.raw High MSVQPTVSLGGFEITPPVVLR 3 0 CID 22.92 4.13 1.00 1 3 743.07739 2227.21762 0.90 47.39 11457 11457 MS2 17/80 Linfeng_081211_IgG_8.raw High MSVQPTVSLGGFEITPPVVLR 3 0 CID 14.84 4.10 1.00 1 3 743.07898 2227.22239 3.04 47.24 11556 11556 MS2 21/80 Linfeng_081211_IgG_6.raw High VDNDENEHQLSLR 4 0 CID 33.20 3.99 1.00 1 2 784.86719 1568.72710 -1.85 23.98 4145 4145 MS2 13/24 Linfeng_081211_IgG_7.raw High VDNDENEHQLSLR 4 0 CID 79.44 3.98 1.00 1 2 784.86768 1568.72807 -1.23 23.42 4204 4204 MS2 14/24 Linfeng_081211_IgG_8.raw High mSVQPTVSLGGFEITPPVVLR 3 0 CID M1(Oxidation) 41.00 3.95 1.00 1 2 1122.11230 2243.21733 3.03 46.18 11282 11282 MS2 14/40 Linfeng_081211_IgG_6.raw High VDNDENEHQLSLR 4 0 CID 56.60 3.81 1.00 1 2 784.86859 1568.72991 -0.06 23.71 4215 4215 MS2 12/24 Linfeng_081211_IgG_10.raw High VDNDENEHQLSLR 4 0 CID 88.70 3.56 1.00 1 2 784.86731 1568.72734 -1.69 23.91 4016 4016 MS2 14/24 Linfeng_081211_IgG_5.raw IPI:IPI00300371.5 1217 135.5 5.26 Isoform 1 of Splicing factor 3B subunit 3 14.63 21 12 192.41 12.65 15 11 50.23 3.37 3 2 62.76 2.63 3 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LGAVFNQVAFPLQYTPR IPI:IPI00300371.5 1 1 CID 95.39 5.90 1.00 1 3 641.01361 1921.02628 -3.56 43.40 4578 4578 MS2 34/64 Linfeng_091611_rIgG_3.raw High LGAVFNQVAFPLQYTPR 1 0 CID 64.64 5.40 1.00 1 3 641.01410 1921.02774 -2.80 43.67 5119 5119 MS2 31/64 Linfeng_091811_SIN3A_2.raw High HGLEVSEmAVSELPGNPNAVWTVR IPI:IPI00300371.5 1 1 CID M8(Oxidation) 52.33 5.23 1.00 1 3 870.09546 2608.27182 -4.11 37.84 3869 3869 MS2 30/92 Linfeng_091611_rIgG_3.raw High LGAVFNQVAFPLQYTPR IPI:IPI00300371.5 1 1 CID 97.45 5.23 1.00 1 2 961.01654 1921.02580 -3.81 43.41 4579 4579 MS2 19/32 Linfeng_091611_rIgG_3.raw High mQGQEAVLAmSSR IPI:IPI00300371.5 1 1 CID "M1(Oxidation), M10(Oxidation)" 68.55 4.88 1.00 1 2 720.33417 1439.66106 -0.52 23.38 4100 4100 MS2 17/24 Linfeng_081211_IgG_3.raw High LGAVFNQVAFPLQYTPR 1 0 CID 43.41 4.79 1.00 1 3 641.01459 1921.02921 -2.04 43.67 5153 5153 MS2 31/64 Linfeng_091811_SIN3A_3.raw High mQGQEAVLAmSSR IPI:IPI00300371.5 1 1 CID "M1(Oxidation), M10(Oxidation)" 61.47 4.76 1.00 1 2 720.33453 1439.66179 -0.01 23.70 3885 3885 MS2 18/24 Linfeng_081211_IgG_2.raw High NENQLIIFADDTYPR IPI:IPI00300371.5 2 1 CID 56.31 4.66 1.00 1 2 904.94507 1808.88286 0.80 41.56 10384 10384 MS2 17/28 Linfeng_081211_IgG_3.raw High NENQLIIFADDTYPR 2 0 CID 40.67 4.40 1.00 1 3 603.63080 1808.87784 -1.98 40.56 4756 4756 MS2 22/56 Linfeng_091811_SIN3A_3.raw High LGAVFNQVAFPLQYTPR IPI:IPI00300371.5 1 1 CID 56.87 4.17 1.00 1 2 961.02338 1921.03948 3.31 44.85 11482 11482 MS2 13/32 Linfeng_081211_IgG_3.raw High WVTTASLLDYDTVAGADK IPI:IPI00300371.5 2 1 CID 3.52 4.11 1.00 1 3 642.65631 1925.95438 2.70 42.17 10595 10595 MS2 20/68 Linfeng_081211_IgG_3.raw High TPVEEVPAAIAPFQGR IPI:IPI00300371.5 2 1 CID 55.68 4.08 1.00 1 2 841.44830 1681.88933 -0.93 37.45 8994 8994 MS2 17/30 Linfeng_081211_IgG_3.raw High SVAGGFVYTYK IPI:IPI00300371.5 2 1 CID 46.97 4.02 1.00 1 2 596.30560 1191.60393 -0.46 32.80 7316 7316 MS2 17/20 Linfeng_081211_IgG_3.raw High DYIVVGSDSGR IPI:IPI00300371.5 2 1 CID 56.31 3.97 1.00 1 2 584.28491 1167.56255 -1.32 28.52 5531 5531 MS2 17/20 Linfeng_081211_IgG_7.raw High NENQLIIFADDTYPR IPI:IPI00300371.5 2 1 CID 42.38 3.96 1.00 1 2 904.94556 1808.88384 1.34 40.54 9416 9416 MS2 15/28 Linfeng_081211_IgG_4.raw High TVLDPVTGDLSDTR IPI:IPI00300371.5 1 1 CID 87.47 3.95 1.00 1 2 744.88220 1488.75713 2.03 34.62 7085 7085 MS2 19/26 Linfeng_081211_IgG_2.raw High FLAVGLVDNTVR IPI:IPI00300371.5 1 1 CID 46.17 3.93 1.00 1 2 652.37109 1303.73491 -1.55 37.70 8542 8542 MS2 17/22 Linfeng_081211_IgG_4.raw High LPPNTNDEVDEDPTGNK IPI:IPI00300371.5 2 1 CID 61.97 3.91 1.00 1 2 927.91925 1854.83122 -2.19 24.92 4616 4616 MS2 16/32 Linfeng_081211_IgG_3.raw High DYIVVGSDSGR IPI:IPI00300371.5 2 1 CID 61.59 3.85 1.00 1 2 584.28558 1167.56389 -0.17 29.09 5920 5920 MS2 17/20 Linfeng_081211_IgG_3.raw High IVILEYQPSK IPI:IPI00300371.5 2 1 CID 63.92 3.78 1.00 1 2 595.34509 1189.68291 0.14 34.26 7858 7858 MS2 15/18 Linfeng_081211_IgG_3.raw High DYIVVGSDSGR IPI:IPI00300371.5 2 1 CID 68.65 3.67 1.00 1 2 584.28442 1167.56157 -2.16 29.31 5505 5505 MS2 17/20 Linfeng_081211_IgG_2.raw IPI:IPI00420014.2 2136 244.4 6.06 Isoform 1 of U5 small nuclear ribonucleoprotein 200 kDa helicase 16.71 50 23 213.65 8.01 15 12 264.06 9.27 18 12 226.18 8.29 17 11 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LTAIDILTTcAADIQR IPI:IPI00420014.2 3 1 CID C10(Carbamidomethyl) 74.11 7.52 1.00 1 3 592.31439 1774.92862 -4.63 45.60 5392 5392 MS2 32/60 Linfeng_091811_SIN3A_1.raw High ETYEVLLSFIQAALGDQPR IPI:IPI00420014.2 3 1 CID 101.54 6.61 1.00 1 3 717.37653 2150.11502 0.99 55.11 6466 6466 MS2 30/72 Linfeng_091611_rIgG_1.raw High ETYEVLLSFIQAALGDQPR IPI:IPI00420014.2 3 1 CID 69.77 6.59 1.00 1 3 717.37708 2150.11667 1.75 55.19 6521 6521 MS2 28/72 Linfeng_091811_SIN3A_2.raw High LTAIDILTTcAADIQR IPI:IPI00420014.2 3 1 CID C10(Carbamidomethyl) 70.33 6.57 1.00 1 3 592.31647 1774.93485 -1.12 45.46 5277 5277 MS2 35/60 Linfeng_091611_rIgG_1.raw High LIGLSATLPNYEDVATFLR IPI:IPI00420014.2 2 1 CID 73.93 6.56 1.00 1 3 698.37921 2093.12308 -2.26 49.58 5788 5788 MS2 29/72 Linfeng_091611_rIgG_1.raw High LTAIDILTTcAADIQR IPI:IPI00420014.2 3 1 CID C10(Carbamidomethyl) 59.84 6.55 1.00 1 3 592.31653 1774.93503 -1.02 45.50 5247 5247 MS2 31/60 Linfeng_091611_rIgG_2.raw High LIGLSATLPNYEDVATFLR IPI:IPI00420014.2 2 1 CID 61.54 6.40 1.00 1 3 698.37921 2093.12308 -2.26 49.62 5761 5761 MS2 29/72 Linfeng_091611_rIgG_2.raw High LIGLSATLPNYEDVATFLR IPI:IPI00420014.2 2 1 CID 88.44 6.20 1.00 1 3 698.37946 2093.12381 -1.91 49.77 5914 5914 MS2 28/72 Linfeng_091811_SIN3A_1.raw High GLFYFDNSFRPVPLEQTYVGITEK IPI:IPI00420014.2 2 1 CID 119.36 6.14 1.00 1 3 940.80884 2820.41196 -4.41 45.36 5264 5264 MS2 32/92 Linfeng_091611_rIgG_1.raw High GLIEIISNAAEYENIPIR IPI:IPI00420014.2 3 1 CID 68.91 6.13 1.00 1 3 672.36444 2015.07877 -1.04 49.17 5839 5839 MS2 31/68 Linfeng_091811_SIN3A_1.raw High NALLQLTDSQIADVAR IPI:IPI00420014.2 3 1 CID 85.78 6.06 1.00 1 2 864.46539 1727.92351 -3.02 40.42 4733 4733 MS2 24/30 Linfeng_091811_SIN3A_1.raw High GLIEIISNAAEYENIPIR IPI:IPI00420014.2 3 1 CID 108.02 5.98 1.00 1 3 672.36353 2015.07602 -2.41 48.93 5704 5704 MS2 31/68 Linfeng_091611_rIgG_1.raw High NALLQLTDSQIADVAR IPI:IPI00420014.2 3 1 CID 93.42 5.89 1.00 1 3 576.64569 1727.92252 -3.59 40.41 4732 4732 MS2 32/60 Linfeng_091811_SIN3A_1.raw High NALLQLTDSQIADVAR IPI:IPI00420014.2 3 1 CID 73.94 5.89 1.00 1 2 864.46771 1727.92815 -0.33 47.53 8427 8427 MS2 22/30 Linfeng_081211_IgG_1.raw High GLIEIISNAAEYENIPIR IPI:IPI00420014.2 3 1 CID 84.95 5.82 1.00 1 3 672.36426 2015.07822 -1.32 49.25 5820 5820 MS2 31/68 Linfeng_091811_SIN3A_2.raw High NALLQLTDSQIADVAR IPI:IPI00420014.2 3 1 CID 90.35 5.66 1.00 1 2 864.46478 1727.92229 -3.72 40.19 4596 4596 MS2 23/30 Linfeng_091611_rIgG_1.raw High GLFYFDNSFRPVPLEQTYVGITEK IPI:IPI00420014.2 2 1 CID 105.50 5.65 1.00 1 3 940.81097 2820.41837 -2.14 45.44 5240 5240 MS2 29/92 Linfeng_091611_rIgG_2.raw High GLIEIISNAAEYENIPIR IPI:IPI00420014.2 3 1 CID 73.66 5.54 1.00 1 3 672.36407 2015.07767 -1.59 48.92 5673 5673 MS2 25/68 Linfeng_091611_rIgG_2.raw High DILcGAADEVLAVLK IPI:IPI00420014.2 3 1 CID C4(Carbamidomethyl) 79.63 5.42 1.00 1 2 793.92615 1586.84502 -0.57 52.57 6159 6159 MS2 25/28 Linfeng_091611_rIgG_1.raw High NALLQLTDSQIADVAR IPI:IPI00420014.2 3 1 CID 61.11 5.34 1.00 1 3 576.64502 1727.92051 -4.75 40.21 4598 4598 MS2 30/60 Linfeng_091611_rIgG_1.raw High INVLLQAFISQLK IPI:IPI00420014.2 2 1 CID 80.00 5.22 1.00 1 2 743.95276 1486.89824 -0.67 51.43 6016 6016 MS2 21/24 Linfeng_091611_rIgG_1.raw High DILcGAADEVLAVLK IPI:IPI00420014.2 3 1 CID C4(Carbamidomethyl) 81.22 4.99 1.00 1 2 793.92645 1586.84563 -0.18 52.84 6276 6276 MS2 25/28 Linfeng_091811_SIN3A_1.raw High LPDMLNAEIVLGNVQNAK IPI:IPI00420014.2 2 1 CID 47.93 4.97 1.00 1 3 647.01404 1939.02756 -2.20 44.22 5218 5218 MS2 26/68 Linfeng_091811_SIN3A_1.raw High MQLSAELQSDTEEILSK IPI:IPI00420014.2 5 1 CID 72.12 4.95 1.00 1 2 961.47729 1921.94731 2.56 48.96 8773 8773 MS2 17/32 Linfeng_081211_IgG_1.raw High LIGLSATLPNYEDVATFLR IPI:IPI00420014.2 2 1 CID 96.38 4.95 1.00 1 2 1047.06653 2093.12578 -0.98 49.84 5922 5922 MS2 17/36 Linfeng_091811_SIN3A_1.raw High VVLLTGETSTDLK IPI:IPI00420014.2 2 1 CID 83.44 4.84 1.00 1 2 688.38550 1375.76372 -3.08 32.07 3641 3641 MS2 21/24 Linfeng_091811_SIN3A_1.raw High LEGFALMADMVYVTQSAGR IPI:IPI00420014.2 2 1 CID 28.22 4.74 1.00 1 3 687.00372 2058.99662 -1.07 51.66 6044 6044 MS2 25/72 Linfeng_091611_rIgG_1.raw High EEEVTGPVIAPLFPQK IPI:IPI00420014.2 3 1 CID 49.50 4.70 1.00 1 2 877.47278 1753.93828 0.63 46.77 8205 8205 MS2 16/30 Linfeng_081211_IgG_1.raw High DILcGAADEVLAVLK IPI:IPI00420014.2 3 1 CID C4(Carbamidomethyl) 89.11 4.69 1.00 1 2 793.92633 1586.84538 -0.33 52.66 6130 6130 MS2 20/28 Linfeng_091611_rIgG_2.raw High LTAIDILTTcAADIQR IPI:IPI00420014.2 3 1 CID C10(Carbamidomethyl) 41.74 4.68 1.00 1 2 887.97321 1774.93913 1.29 50.26 9107 9107 MS2 17/30 Linfeng_081211_IgG_1.raw High QDAVDYLTWTFLYR IPI:IPI00420014.2 3 1 CID 35.54 4.65 1.00 1 3 597.62964 1790.87436 -0.28 51.73 6053 6053 MS2 18/52 Linfeng_091611_rIgG_1.raw High GLIEIISNAAEYENIPIR IPI:IPI00420014.2 3 1 CID 64.55 4.62 1.00 1 2 1008.04364 2015.08000 -0.43 49.23 5846 5846 MS2 15/34 Linfeng_091811_SIN3A_1.raw High VVLLTGETSTDLK IPI:IPI00420014.2 2 1 CID 76.94 4.56 1.00 1 2 688.38574 1375.76421 -2.72 41.29 6598 6598 MS2 19/24 Linfeng_081211_IgG_1.raw High IVALSSSLSNAK IPI:IPI00420014.2 3 1 CID 65.25 4.40 1.00 1 2 595.34290 1189.67851 -0.18 30.31 5829 5829 MS2 17/22 Linfeng_081211_IgG_2.raw High DEPTGEVLSLVGK IPI:IPI00420014.2 3 1 CID 64.30 4.38 1.00 1 2 672.35425 1343.70122 -3.08 38.21 4446 4446 MS2 20/24 Linfeng_091811_SIN3A_1.raw High YPPPTELLDLQPLPVSALR IPI:IPI00420014.2 2 1 CID 28.85 4.38 1.00 1 3 707.06396 2119.17734 -1.19 47.22 5595 5595 MS2 24/72 Linfeng_091811_SIN3A_1.raw High DILcGAADEVLAVLK IPI:IPI00420014.2 3 1 CID C4(Carbamidomethyl) 68.06 4.34 1.00 1 3 529.61896 1586.84232 -2.27 52.85 6277 6277 MS2 28/56 Linfeng_091811_SIN3A_1.raw High AALETDENLLLcAPTGAGK IPI:IPI00420014.2 4 1 CID C12(Carbamidomethyl) 31.13 4.32 1.00 1 2 972.49066 1943.97405 -0.17 43.41 7185 7185 MS2 16/36 Linfeng_081211_IgG_1.raw High YPPPTELLDLQPLPVSALR IPI:IPI00420014.2 2 1 CID 63.12 4.20 1.00 1 2 1060.09094 2119.17461 -2.48 47.61 5643 5643 MS2 15/36 Linfeng_091811_SIN3A_1.raw High TGNFQVTELGR IPI:IPI00420014.2 2 1 CID 65.23 4.18 1.00 1 2 611.31213 1221.61699 -4.33 30.22 3396 3396 MS2 16/20 Linfeng_091811_SIN3A_1.raw High SLVQEMVGSFGK IPI:IPI00420014.2 4 1 CID 75.28 4.16 1.00 1 2 641.32690 1281.64653 -3.35 41.20 4727 4727 MS2 19/22 Linfeng_091611_rIgG_1.raw High DEPTGEVLSLVGK IPI:IPI00420014.2 3 1 CID 34.58 4.09 1.00 1 2 672.35431 1343.70134 -2.99 38.18 4331 4331 MS2 20/24 Linfeng_091611_rIgG_1.raw High EIDLLLGQTDDTR IPI:IPI00420014.2 3 1 CID 76.14 4.01 1.00 1 2 744.87958 1488.75188 -1.49 44.66 7578 7578 MS2 16/24 Linfeng_081211_IgG_1.raw High DEPTGEVLSLVGK IPI:IPI00420014.2 3 1 CID 28.58 3.95 1.00 1 2 672.35590 1343.70452 -0.63 43.49 7207 7207 MS2 18/24 Linfeng_081211_IgG_1.raw High IVALSSSLSNAK IPI:IPI00420014.2 3 1 CID 50.31 3.85 1.00 1 2 595.34277 1189.67827 -0.39 38.56 5806 5806 MS2 16/22 Linfeng_081211_IgG_1.raw High VVLLTGETSTDLK IPI:IPI00420014.2 2 1 CID 58.84 3.82 1.00 1 2 688.38733 1375.76738 -0.41 41.00 6518 6518 MS2 21/24 Linfeng_081211_IgG_1.raw High DILcGAADEVLAVLK IPI:IPI00420014.2 3 1 CID C4(Carbamidomethyl) 47.73 3.77 1.00 1 2 793.92865 1586.85002 2.59 54.26 9845 9845 MS2 19/28 Linfeng_081211_IgG_1.raw High FYDDAIVSQK IPI:IPI00420014.2 3 1 CID 37.34 3.66 1.00 1 2 593.29218 1185.57707 -1.35 30.21 6346 6346 MS2 15/18 Linfeng_081211_IgG_3.raw High VVLLTGETSTDLK IPI:IPI00420014.2 2 1 CID 44.07 3.60 1.00 1 2 688.38788 1375.76848 0.38 33.45 7559 7559 MS2 18/24 Linfeng_081211_IgG_3.raw High NSAFESLYQDK IPI:IPI00420014.2 2 1 CID 43.70 3.56 1.00 1 2 651.30347 1301.59966 -0.93 40.69 6417 6417 MS2 15/20 Linfeng_081211_IgG_1.raw IPI:IPI00793930.1 335 37.2 4.98 TUBA1B protein 38.21 24 8 122.55 38.21 15 8 37.43 20.30 4 4 64.65 26.27 5 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High TIGGGDDSFNTFFSETGAGK 15 0 CID 136.18 6.59 1.00 1 2 1004.44556 2007.88384 -4.63 40.16 4870 4870 MS2 23/38 Linfeng_091811_SIN3A_5.raw High FDGALNVDLTEFQTNLVPYPR IPI:IPI00793930.1 20 1 CID 74.56 5.74 1.00 1 2 1205.10938 2409.21147 1.19 46.99 11073 11073 MS2 21/40 Linfeng_081211_IgG_5.raw High VGINYQPPTVVPGGDLAK 19 0 CID 104.30 5.20 1.00 1 2 912.99280 1824.97832 -3.94 35.14 4197 4197 MS2 19/34 Linfeng_091811_SIN3A_5.raw High AVFVDLEPTVIDEVR 10 0 CID 29.94 5.12 1.00 1 3 567.97131 1701.89939 -3.81 42.56 5186 5186 MS2 24/56 Linfeng_091811_SIN3A_5.raw High AVFVDLEPTVIDEVR 10 0 CID 43.19 5.12 1.00 1 3 567.97174 1701.90067 -3.06 42.31 5019 5019 MS2 26/56 Linfeng_091611_rIgG_5.raw High FDGALNVDLTEFQTNLVPYPR 20 0 CID 44.27 4.87 1.00 1 3 803.73743 2409.19773 -4.51 47.26 5640 5640 MS2 24/80 Linfeng_091611_rIgG_5.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 121.23 4.63 1.00 1 2 851.45532 1701.90337 -1.47 42.24 9818 9818 MS2 20/28 Linfeng_081211_IgG_5.raw High LISQIVSSITASLR 15 0 CID 74.64 4.58 1.00 1 2 744.44177 1487.87627 -1.99 48.86 5843 5843 MS2 18/26 Linfeng_091611_rIgG_5.raw High TIGGGDDSFNTFFSETGAGK IPI:IPI00793930.1 15 1 CID 71.00 4.51 1.00 1 2 1004.44885 2007.89043 -1.35 40.60 9585 9585 MS2 15/38 Linfeng_081211_IgG_6.raw High FDGALNVDLTEFQTNLVPYPR 20 0 CID 64.77 4.51 1.00 1 3 803.73737 2409.19754 -4.59 47.59 5827 5827 MS2 26/80 Linfeng_091811_SIN3A_5.raw High LISQIVSSITASLR IPI:IPI00793930.1 15 1 CID 56.43 4.41 1.00 1 2 744.44513 1487.88298 2.52 49.72 11728 11728 MS2 18/26 Linfeng_081211_IgG_5.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 45.96 4.28 1.00 1 2 851.45685 1701.90642 0.32 43.54 10484 10484 MS2 13/28 Linfeng_081211_IgG_6.raw High VGINYQPPTVVPGGDLAK 19 0 CID 13.94 4.19 1.00 1 2 912.99445 1824.98161 -2.13 35.10 4085 4085 MS2 10/34 Linfeng_091611_rIgG_5.raw High VGINYQPPTVVPGGDLAK IPI:IPI00793930.1 19 1 CID 35.83 4.12 1.00 1 2 912.99548 1824.98369 -1.00 35.00 7713 7713 MS2 14/34 Linfeng_081211_IgG_5.raw High LISQIVSSITASLR 15 0 CID 86.53 4.11 1.00 1 2 744.44354 1487.87981 0.39 49.14 6027 6027 MS2 20/26 Linfeng_091811_SIN3A_5.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 56.48 4.08 1.00 1 2 851.45990 1701.91252 3.91 42.47 10300 10300 MS2 15/28 Linfeng_081211_IgG_7.raw High AVcmLSNTTAIAEAWAR IPI:IPI00793930.1 17 1 CID "C3(Carbamidomethyl), M4(Oxidation)" 32.76 4.04 1.00 1 2 940.95142 1880.89556 -2.06 37.71 8617 8617 MS2 11/32 Linfeng_081211_IgG_10.raw High VGINYQPPTVVPGGDLAK IPI:IPI00793930.1 19 1 CID 35.67 4.03 1.00 1 2 912.99634 1824.98540 -0.06 34.76 7683 7683 MS2 14/34 Linfeng_081211_IgG_10.raw High SIQFVDWcPTGFK IPI:IPI00793930.1 6 1 CID C8(Carbamidomethyl) 75.99 3.87 1.00 1 2 792.88074 1584.75420 1.64 41.54 9917 9917 MS2 15/24 Linfeng_081211_IgG_10.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 34.51 3.72 1.00 1 2 851.45850 1701.90972 2.26 42.14 10110 10110 MS2 11/28 Linfeng_081211_IgG_10.raw High DVNAAIATIK IPI:IPI00793930.1 11 1 CID 27.63 3.61 1.00 1 2 508.29263 1015.57799 -0.30 31.62 6864 6864 MS2 14/18 Linfeng_081211_IgG_3.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 36.17 3.57 1.00 1 2 851.45758 1701.90788 1.18 43.50 10468 10468 MS2 12/28 Linfeng_081211_IgG_6.raw High VGINYQPPTVVPGGDLAK IPI:IPI00793930.1 19 1 CID 22.52 3.57 1.00 1 2 912.99500 1824.98271 -1.53 35.21 7915 7915 MS2 10/34 Linfeng_081211_IgG_7.raw High AVFVDLEPTVIDEVR IPI:IPI00793930.1 10 1 CID 39.24 3.48 1.00 1 2 851.45850 1701.90972 2.26 43.61 11075 11075 MS2 12/28 Linfeng_081211_IgG_3.raw IPI:IPI00003865.1 646 70.9 5.52 Isoform 1 of Heat shock cognate 71 kDa protein 35.76 40 16 150.30 31.89 16 14 118.59 20.59 9 8 217.44 28.33 15 12 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SINPDEAVAYGAAVQAAILSGDK IPI:IPI00003865.1 3 1 CID 106.12 8.39 1.00 1 3 754.05170 2260.14054 -2.28 47.55 5658 5658 MS2 34/88 Linfeng_091811_SIN3A_4.raw High QTQTFTTYSDNQPGVLIQVYEGER IPI:IPI00003865.1 3 1 CID 124.79 7.54 1.00 1 3 925.44513 2774.32083 -2.17 40.34 4744 4744 MS2 31/92 Linfeng_091811_SIN3A_4.raw High SINPDEAVAYGAAVQAAILSGDK IPI:IPI00939595.1 3 1 CID 95.29 7.53 1.00 1 3 754.05225 2260.14219 -1.55 47.19 5678 5678 MS2 31/88 Linfeng_091611_rIgG_4.raw High QTQTFTTYSDNQPGVLIQVYEGER IPI:IPI00939595.1 3 1 CID 85.93 6.41 1.00 1 3 925.44501 2774.32047 -2.30 40.06 4773 4773 MS2 30/92 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 80.11 6.06 1.00 1 3 553.96759 1659.88822 -4.26 37.76 4413 4413 MS2 38/60 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00939595.1 14 1 CID 91.33 5.73 1.00 1 3 553.96729 1659.88730 -4.81 37.39 4426 4426 MS2 33/60 Linfeng_091611_rIgG_4.raw High GPAVGIDLGTTYScVGVFQHGK IPI:IPI00003865.1 4 1 CID C14(Carbamidomethyl) 126.25 5.45 1.00 1 3 755.04425 2263.11820 0.23 37.45 8450 8450 MS2 32/84 Linfeng_081211_IgG_4.raw High NQVAMNPTNTVFDAK IPI:IPI00003865.1 4 1 CID 117.01 5.22 1.00 1 2 825.39825 1649.78923 -3.65 31.60 3619 3619 MS2 22/28 Linfeng_091811_SIN3A_4.raw High NQVAmNPTNTVFDAK IPI:IPI00003865.1 4 1 CID M5(Oxidation) 111.58 5.20 1.00 1 2 833.39581 1665.78435 -3.50 28.07 3143 3143 MS2 23/28 Linfeng_091811_SIN3A_4.raw High NQVAmNPTNTVFDAK IPI:IPI00939595.1 4 1 CID M5(Oxidation) 105.42 5.15 1.00 1 2 833.39581 1665.78435 -3.50 27.77 3157 3157 MS2 23/28 Linfeng_091611_rIgG_4.raw High TVTNAVVTVPAYFNDSQR IPI:IPI00939595.1 4 1 CID 61.02 5.13 1.00 1 3 661.33539 1981.99161 -3.15 36.19 4270 4270 MS2 30/68 Linfeng_091611_rIgG_4.raw High ARFEELNADLFR IPI:IPI00939595.1 4 1 CID 50.18 5.10 1.00 1 3 494.25330 1480.74533 -6.11 35.46 4173 4173 MS2 22/44 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 94.95 5.04 1.00 1 2 830.45294 1659.89861 2.00 37.43 8442 8442 MS2 21/30 Linfeng_081211_IgG_4.raw High NQVAMNPTNTVFDAK IPI:IPI00939595.1 4 1 CID 85.39 5.03 1.00 1 2 825.39856 1649.78984 -3.28 31.29 3631 3631 MS2 21/28 Linfeng_091611_rIgG_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00893099.1 14 3 CID 110.08 4.99 1.00 1 2 830.44733 1659.88738 -4.77 37.78 4416 4416 MS2 25/30 Linfeng_091811_SIN3A_4.raw High IINEPTAAAIAYGLDK IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00942823.1 14 3 CID 68.16 4.89 1.00 1 3 553.97003 1659.89554 0.15 37.46 8453 8453 MS2 34/60 Linfeng_081211_IgG_4.raw High ARFEELNADLFR IPI:IPI00003865.1 4 1 CID 34.51 4.83 1.00 1 3 494.25671 1480.75559 0.82 36.30 8064 8064 MS2 22/44 Linfeng_081211_IgG_4.raw High SQIHDIVLVGGSTR IPI:IPI00939595.1 3 1 CID 89.40 4.78 1.00 1 2 741.40460 1481.80193 -3.51 28.86 3305 3305 MS2 18/26 Linfeng_091611_rIgG_4.raw High QTQTFTTYSDNQPGVLIQVYEGER IPI:IPI00003865.1 3 1 CID 47.39 4.75 1.00 1 3 925.44745 2774.32779 0.34 39.74 9186 9186 MS2 25/92 Linfeng_081211_IgG_4.raw High ARFEELNADLFR IPI:IPI00003865.1 4 1 CID 43.83 4.70 1.00 1 3 494.25320 1480.74506 -6.30 35.79 4159 4159 MS2 25/44 Linfeng_091811_SIN3A_4.raw High STAGDTHLGGEDFDNR IPI:IPI00003865.1 4 1 CID 116.89 4.70 1.00 1 2 846.36438 1691.72148 -2.47 24.09 2591 2591 MS2 21/30 Linfeng_091811_SIN3A_4.raw High NQVAmNPTNTVFDAK IPI:IPI00003865.1 4 1 CID M5(Oxidation) 77.21 4.69 1.00 1 2 833.39960 1665.79192 1.05 28.52 5548 5548 MS2 19/28 Linfeng_081211_IgG_4.raw High FDDAVVQSDmK IPI:IPI00003865.1 6 1 CID M10(Oxidation) 79.31 4.63 1.00 1 2 635.78296 1270.55864 -2.70 24.06 2587 2587 MS2 18/20 Linfeng_091811_SIN3A_4.raw High DAGTIAGLNVLR IPI:IPI00003865.1 6 1 CID 24.20 4.63 1.00 1 3 400.56146 1199.66983 -3.75 37.42 4369 4369 MS2 25/44 Linfeng_091811_SIN3A_4.raw High SFYPEEVSSmVLTK IPI:IPI00003865.1 4 1 CID M10(Oxidation) 56.20 4.58 1.00 1 3 544.93030 1632.77634 -3.84 35.53 4125 4125 MS2 28/52 Linfeng_091811_SIN3A_4.raw High FDDAVVQSDMK IPI:IPI00003865.1 6 1 CID 67.22 4.57 1.00 1 2 627.78497 1254.56267 -3.57 28.22 3164 3164 MS2 18/20 Linfeng_091811_SIN3A_4.raw High TVTNAVVTVPAYFNDSQR IPI:IPI00003865.1 4 1 CID 64.21 4.36 1.00 1 3 661.33588 1981.99308 -2.41 36.56 4259 4259 MS2 31/68 Linfeng_091811_SIN3A_4.raw High SQIHDIVLVGGSTR IPI:IPI00003865.1 3 1 CID 57.75 4.36 1.00 1 2 741.40704 1481.80681 -0.22 29.85 6005 6005 MS2 16/26 Linfeng_081211_IgG_4.raw High mKEIAEAYLGK IPI:IPI00003865.1 5 1 CID M1(Oxidation) 22.89 4.35 1.00 1 3 423.55490 1268.65015 -4.27 25.52 2793 2793 MS2 24/40 Linfeng_091811_SIN3A_4.raw High NSLESYAFNmK IPI:IPI00003865.1 2 1 CID M10(Oxidation) 63.90 4.16 1.00 1 2 660.29791 1319.58855 -3.89 30.83 3518 3518 MS2 17/20 Linfeng_091811_SIN3A_4.raw High SINPDEAVAYGAAVQAAILSGDK IPI:IPI00003865.1 3 1 CID 65.63 4.14 1.00 1 3 754.05457 2260.14914 1.53 46.67 10791 10791 MS2 26/88 Linfeng_081211_IgG_4.raw High FDDAVVQSDMK IPI:IPI00939595.1 6 1 CID 67.84 4.13 1.00 1 2 627.78497 1254.56267 -3.57 27.89 3173 3173 MS2 18/20 Linfeng_091611_rIgG_4.raw High mKEIAEAYLGK IPI:IPI00003865.1 5 1 CID M1(Oxidation) 33.23 4.08 1.00 1 3 423.55685 1268.65601 0.35 26.21 4891 4891 MS2 19/40 Linfeng_081211_IgG_4.raw High IINEPTAAAIAYGLDKK IPI:IPI00003865.1 6 1 CID 40.05 3.98 1.00 1 2 894.49768 1787.98808 -1.22 34.73 7609 7609 MS2 14/32 Linfeng_081211_IgG_4.raw High DAGTIAGLNVLR IPI:IPI00003865.1 6 1 CID 67.63 3.88 1.00 1 2 600.34143 1199.67558 1.04 37.42 8436 8436 MS2 20/22 Linfeng_081211_IgG_4.raw High TVTNAVVTVPAYFNDSQR IPI:IPI00003865.1 4 1 CID 22.89 3.86 1.00 1 2 991.50104 1981.99480 -1.54 36.39 8097 8097 MS2 13/34 Linfeng_081211_IgG_4.raw High STAGDTHLGGEDFDNR IPI:IPI00003865.1 4 1 CID 91.40 3.77 1.00 1 2 846.36603 1691.72478 -0.52 24.62 4374 4374 MS2 16/30 Linfeng_081211_IgG_4.raw High NSLESYAFNmK IPI:IPI00003865.1 2 1 CID M10(Oxidation) 69.33 3.75 1.00 1 2 660.29993 1319.59258 -0.83 31.08 6435 6435 MS2 16/20 Linfeng_081211_IgG_4.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 41.21 3.57 1.00 2 2 614.81689 1228.62651 -1.29 24.79 4573 4573 MS2 15/20 Linfeng_081211_IgG_3.raw High VEIIANDQGNR IPI:IPI00003362.2;IPI:IPI00003865.1;IPI:IPI00911039.1;IPI:IPI00942823.1 23 4 CID 15.51 3.47 1.00 2 2 614.81671 1228.62615 -1.59 24.22 4232 4232 MS2 13/20 Linfeng_081211_IgG_7.raw IPI:IPI00215965.3 372 38.7 9.13 Isoform A1-B of Heterogeneous nuclear ribonucleoprotein A1 36.83 31 8 201.72 28.23 16 6 126.32 33.60 8 7 113.30 22.31 7 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR IPI:IPI00215965.3 1 1 CID 147.78 7.16 1.00 1 3 958.71570 2874.13254 -1.62 30.14 3418 3418 MS2 38/128 Linfeng_091611_rIgG_6.raw High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR 1 0 CID 95.91 6.60 1.00 1 3 958.71478 2874.12979 -2.58 30.34 3434 3434 MS2 35/128 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTDESLR 9 0 CID 103.69 5.99 1.00 1 2 892.95453 1784.90178 -2.69 43.73 5162 5162 MS2 24/30 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTDESLR IPI:IPI00215965.3 9 1 CID 103.51 5.84 1.00 1 2 892.95502 1784.90276 -2.15 43.46 5152 5152 MS2 24/30 Linfeng_091611_rIgG_6.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 146.32 5.76 1.00 1 2 847.85217 1694.69707 -1.81 18.16 1771 1771 MS2 23/34 Linfeng_091611_rIgG_6.raw High NQGGYGGSSSSSSYGSGR 5 0 CID 130.73 5.74 1.00 1 2 847.85211 1694.69695 -1.88 18.09 1738 1738 MS2 21/34 Linfeng_091811_SIN3A_6.raw High SHFEQWGTLTDcVVmR IPI:IPI00215965.3 9 1 CID "C12(Carbamidomethyl), M15(Oxidation)" 56.45 5.63 1.00 1 3 661.29999 1981.88541 -2.10 34.41 3982 3982 MS2 29/60 Linfeng_091611_rIgG_6.raw High SHFEQWGTLTDcVVmR 9 0 CID "C12(Carbamidomethyl), M15(Oxidation)" 66.38 5.48 1.00 1 3 661.29901 1981.88248 -3.58 34.57 3988 3988 MS2 29/60 Linfeng_091811_SIN3A_6.raw High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR IPI:IPI00215965.3 1 1 CID 36.13 5.46 1.00 1 3 958.71478 2874.12979 -2.58 30.23 6188 6188 MS2 28/128 Linfeng_081211_IgG_6.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 144.77 5.15 1.00 1 2 847.85278 1694.69829 -1.09 17.96 1680 1680 MS2 24/34 Linfeng_091611_rIgG_7.raw High RGFAFVTFDDHDSVDK IPI:IPI00215965.3 10 1 CID 84.93 5.04 1.00 1 3 619.28973 1855.85465 -3.44 33.90 3914 3914 MS2 27/60 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTDESLR IPI:IPI00215965.3 9 1 CID 76.57 4.99 1.00 1 2 892.95923 1784.91118 2.57 43.35 10481 10481 MS2 22/30 Linfeng_081211_IgG_10.raw High LFIGGLSFETTDESLR IPI:IPI00215965.3 9 1 CID 92.35 4.98 1.00 1 2 892.95789 1784.90849 1.07 43.70 10666 10666 MS2 18/30 Linfeng_081211_IgG_7.raw High NQGGYGGSSSSSSYGSGR 5 0 CID 51.86 4.82 1.00 1 3 565.57007 1694.69565 -2.65 18.14 1744 1744 MS2 33/68 Linfeng_091811_SIN3A_6.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 42.47 4.71 1.00 1 3 565.57172 1694.70060 0.27 18.58 2652 2652 MS2 24/68 Linfeng_081211_IgG_6.raw High NQGGYGGSSSSSSYGSGR 5 0 CID 130.41 4.68 1.00 1 2 847.85242 1694.69756 -1.52 16.86 1378 1378 MS2 16/34 Linfeng_091811_SIN3A_7.raw High SSGPYGGGGQYFAKPR IPI:IPI00215965.3 6 1 CID 111.83 4.61 1.00 1 2 814.89203 1628.77678 -2.98 25.06 2727 2727 MS2 19/30 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTDESLR 9 0 CID 75.16 4.59 1.00 1 3 595.63867 1784.90146 -2.87 43.77 5167 5167 MS2 32/60 Linfeng_091811_SIN3A_6.raw High SSGPYGGGGQYFAKPR IPI:IPI00215965.3 6 1 CID 125.82 4.58 1.00 1 2 814.89240 1628.77751 -2.53 26.11 4950 4950 MS2 18/30 Linfeng_081211_IgG_6.raw High SSGPYGGGGQYFAKPR IPI:IPI00215965.3 6 1 CID 87.14 4.39 1.00 1 2 814.89105 1628.77483 -4.18 25.91 4783 4783 MS2 14/30 Linfeng_081211_IgG_7.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 131.42 4.38 1.00 1 2 847.85541 1694.70354 2.00 19.03 2611 2611 MS2 20/34 Linfeng_081211_IgG_7.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 139.33 4.31 1.00 1 2 847.85559 1694.70391 2.22 18.52 2633 2633 MS2 18/34 Linfeng_081211_IgG_6.raw High NQGGYGGSSSSSSYGSGR IPI:IPI00215965.3 5 1 CID 119.10 4.24 1.00 1 2 847.85382 1694.70036 0.13 18.54 2665 2665 MS2 16/34 Linfeng_081211_IgG_8.raw High IEVIEIMTDR IPI:IPI00215965.3 10 1 CID 54.86 4.18 1.00 1 2 609.82141 1218.63555 -3.59 38.37 4497 4497 MS2 17/18 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTDESLR IPI:IPI00215965.3 9 1 CID 65.28 4.10 1.00 1 2 892.95825 1784.90923 1.48 44.61 10806 10806 MS2 17/30 Linfeng_081211_IgG_6.raw High IEVIEIMTDR IPI:IPI00215965.3 10 1 CID 62.65 4.04 1.00 1 2 609.82281 1218.63835 -1.29 38.90 9066 9066 MS2 16/18 Linfeng_081211_IgG_6.raw High IEVIEImTDR IPI:IPI00215965.3 10 1 CID M7(Oxidation) 68.64 3.90 1.00 1 2 617.82068 1234.63408 -0.61 32.46 6911 6911 MS2 17/18 Linfeng_081211_IgG_7.raw High IEVIEIMTDR IPI:IPI00215965.3 10 1 CID 68.56 3.81 1.00 1 2 609.82318 1218.63909 -0.69 38.91 9111 9111 MS2 16/18 Linfeng_081211_IgG_7.raw High GGGFGGNDNFGR IPI:IPI00215965.3 4 1 CID 33.13 3.77 1.00 1 2 577.75195 1154.49663 -0.69 26.27 4907 4907 MS2 11/22 Linfeng_081211_IgG_7.raw High IEVIEImTDR IPI:IPI00215965.3 10 1 CID M7(Oxidation) 60.93 3.76 1.00 1 2 617.82080 1234.63432 -0.41 32.29 6874 6874 MS2 16/18 Linfeng_081211_IgG_6.raw High GGGFGGNDNFGR IPI:IPI00215965.3 4 1 CID 66.45 3.72 1.00 1 2 577.75128 1154.49529 -1.86 25.93 4887 4887 MS2 15/22 Linfeng_081211_IgG_6.raw IPI:IPI00411937.4 594 66.0 9.19 Nucleolar protein 56 40.57 37 14 191.49 27.10 17 10 141.14 27.44 14 8 89.76 12.79 6 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LAALALASSENSSSTPEEcEEmSEKPK IPI:IPI00411937.4 3 1 CID "C19(Carbamidomethyl), M22(Oxidation)" 150.00 6.17 1.00 1 3 971.10846 2911.31083 -2.63 29.14 3344 3344 MS2 29/104 Linfeng_091611_rIgG_4.raw High SSmGmDISAIDLINIESFSSR IPI:IPI00411937.4 3 1 CID "M3(Oxidation), M5(Oxidation)" 94.43 5.93 1.00 1 3 769.02649 2305.06491 -1.67 45.11 5420 5420 MS2 31/80 Linfeng_091611_rIgG_4.raw High EAMVQAEEAAAEITR IPI:IPI00411937.4 6 1 CID 29.98 5.92 1.00 1 3 540.26086 1618.76804 -3.81 35.02 4115 4115 MS2 33/56 Linfeng_091611_rIgG_4.raw High EAmVQAEEAAAEITR IPI:IPI00956199.1 6 1 CID M3(Oxidation) 72.97 5.85 1.00 1 2 817.88611 1634.76494 -2.56 30.36 3455 3455 MS2 22/28 Linfeng_091811_SIN3A_4.raw High EAmVQAEEAAAEITR IPI:IPI00411937.4 6 1 CID M3(Oxidation) 44.82 5.79 1.00 1 3 545.59283 1634.76395 -3.17 29.99 3459 3459 MS2 31/56 Linfeng_091611_rIgG_4.raw High LVAFcPFASSQVALENANAVSEGVVHEDLR IPI:IPI00411937.4 4 1 CID C5(Carbamidomethyl) 112.24 5.74 1.00 1 4 808.15302 3229.59023 -1.41 45.64 5487 5487 MS2 41/174 Linfeng_091611_rIgG_4.raw High EAmVQAEEAAAEITR IPI:IPI00411937.4 6 1 CID M3(Oxidation) 89.51 5.67 1.00 1 2 817.88782 1634.76836 -0.47 30.33 6157 6157 MS2 23/28 Linfeng_081211_IgG_4.raw High EAMVQAEEAAAEITR IPI:IPI00411937.4 6 1 CID 72.35 5.57 1.00 1 2 809.89081 1618.77434 0.08 35.16 7754 7754 MS2 21/28 Linfeng_081211_IgG_4.raw High EAmVQAEEAAAEITR IPI:IPI00411937.4 6 1 CID M3(Oxidation) 82.53 5.46 1.00 1 2 817.88550 1634.76372 -3.31 30.01 3461 3461 MS2 23/28 Linfeng_091611_rIgG_4.raw High VDNMIIQSISLLDQLDK IPI:IPI00411937.4 4 1 CID 58.45 5.42 1.00 1 3 649.01624 1945.03415 1.54 54.28 6513 6513 MS2 27/64 Linfeng_091611_rIgG_4.raw High mSQVAPSLSALIGEAVGAR IPI:IPI00411937.4 5 1 CID M1(Oxidation) 87.43 5.35 1.00 1 3 624.99811 1872.97977 -2.73 46.87 5638 5638 MS2 30/72 Linfeng_091611_rIgG_4.raw High mSQVAPSLSALIGEAVGAR IPI:IPI00956199.1 5 1 CID M1(Oxidation) 72.02 5.33 1.00 1 3 624.99860 1872.98124 -1.95 47.18 5621 5621 MS2 31/72 Linfeng_091811_SIN3A_4.raw High VDNmIIQSISLLDQLDK IPI:IPI00956199.1 4 1 CID M4(Oxidation) 56.77 5.32 1.00 1 3 654.34320 1961.01505 -5.62 48.12 5721 5721 MS2 29/64 Linfeng_091811_SIN3A_4.raw High EVEEISLLQPQVEESVLNLGK IPI:IPI00411937.4 4 1 CID 130.25 5.27 1.00 1 3 785.08618 2353.24399 -2.47 46.88 5639 5639 MS2 31/80 Linfeng_091611_rIgG_4.raw High MSQVAPSLSALIGEAVGAR IPI:IPI00411937.4 5 1 CID 59.14 5.27 1.00 1 3 619.66705 1856.98661 -1.81 48.02 5782 5782 MS2 30/72 Linfeng_091611_rIgG_4.raw High EAmVQAEEAAAEITR IPI:IPI00956199.1 6 1 CID M3(Oxidation) 25.62 5.07 1.00 1 3 545.59302 1634.76450 -2.83 30.34 3453 3453 MS2 28/56 Linfeng_091811_SIN3A_4.raw High VDNmIIQSISLLDQLDK IPI:IPI00411937.4 4 1 CID M4(Oxidation) 47.16 4.93 1.00 1 3 654.34631 1961.02439 -0.86 47.80 5754 5754 MS2 29/64 Linfeng_091611_rIgG_4.raw High YPASTVQILGAEK IPI:IPI00411937.4 5 1 CID 73.89 4.83 1.00 1 2 688.87476 1376.74224 0.13 31.90 6693 6693 MS2 21/24 Linfeng_081211_IgG_4.raw High LAALALASSENSSSTPEEcEEMSEKPK IPI:IPI00411937.4 3 1 CID C19(Carbamidomethyl) 77.30 4.81 1.00 1 3 965.77496 2895.31034 -4.57 30.72 3555 3555 MS2 22/104 Linfeng_091611_rIgG_4.raw High EVEEISLLQPQVEESVLNLGK IPI:IPI00411937.4 4 1 CID 126.94 4.60 1.00 1 3 785.08594 2353.24326 -2.78 46.82 5632 5632 MS2 27/80 Linfeng_091611_rIgG_4.raw High mSQVAPSLSALIGEAVGAR IPI:IPI00411937.4 5 1 CID M1(Oxidation) 46.21 4.59 1.00 1 3 625.00061 1872.98728 1.28 46.51 10768 10768 MS2 27/72 Linfeng_081211_IgG_4.raw High IDcFSEVPTSVFGEK IPI:IPI00411937.4 5 1 CID C3(Carbamidomethyl) 51.37 4.56 1.00 1 2 857.90247 1714.79766 -0.99 38.73 8859 8859 MS2 16/28 Linfeng_081211_IgG_4.raw High FSKEEPVSSGPEEAVGK IPI:IPI00411937.4 2 1 CID 12.96 4.42 1.00 1 3 592.95996 1776.86533 0.11 23.52 3997 3997 MS2 22/64 Linfeng_081211_IgG_4.raw High YPASTVQILGAEK IPI:IPI00411937.4 5 1 CID 72.92 4.32 1.00 1 2 688.87189 1376.73650 -4.04 31.24 3624 3624 MS2 22/24 Linfeng_091611_rIgG_4.raw High YGLIFHSTFIGR IPI:IPI00956199.1 5 1 CID 70.41 4.30 1.00 1 3 470.92081 1410.74787 -3.56 37.00 4315 4315 MS2 26/44 Linfeng_091811_SIN3A_4.raw High LAALALASSENSSSTPEEcEEmSEKPK IPI:IPI00411937.4 3 1 CID "C19(Carbamidomethyl), M22(Oxidation)" 54.64 4.23 1.00 1 3 971.11151 2911.31998 0.52 29.77 5981 5981 MS2 25/104 Linfeng_081211_IgG_4.raw High YPASTVQILGAEK IPI:IPI00956199.1 5 1 CID 72.41 4.20 1.00 1 2 688.87189 1376.73650 -4.04 31.64 3625 3625 MS2 22/24 Linfeng_091811_SIN3A_4.raw High YPASTVQILGAEK IPI:IPI00411937.4 5 1 CID 52.48 4.12 1.00 1 2 688.87488 1376.74248 0.30 32.81 7321 7321 MS2 17/24 Linfeng_081211_IgG_3.raw High YPASTVQILGAEK IPI:IPI00411937.4 5 1 CID 36.40 4.12 1.00 1 2 688.87372 1376.74016 -1.38 32.12 6661 6661 MS2 17/24 Linfeng_081211_IgG_5.raw High YPASTVQILGAEK IPI:IPI00411937.4 5 1 CID 55.72 3.99 1.00 1 2 688.87347 1376.73967 -1.74 32.08 6808 6808 MS2 14/24 Linfeng_081211_IgG_6.raw High LSFYETGEIPR IPI:IPI00411937.4 5 1 CID 58.64 3.97 1.00 1 2 656.33130 1311.65532 -2.04 34.67 7593 7593 MS2 16/20 Linfeng_081211_IgG_5.raw High LSFYETGEIPR IPI:IPI00411937.4 5 1 CID 51.93 3.85 1.00 1 2 656.33337 1311.65947 1.13 35.61 8370 8370 MS2 13/20 Linfeng_081211_IgG_3.raw High LIAHAGSLTNLAK IPI:IPI00411937.4 5 1 CID 49.00 3.85 1.00 1 2 654.88446 1308.76164 -1.40 27.74 5303 5303 MS2 16/24 Linfeng_081211_IgG_4.raw High IINDNATYcR IPI:IPI00411937.4 4 1 CID C9(Carbamidomethyl) 44.83 3.83 1.00 1 2 620.29382 1239.58037 1.36 22.33 3623 3623 MS2 16/18 Linfeng_081211_IgG_4.raw High LSFYETGEIPR IPI:IPI00411937.4 5 1 CID 41.89 3.81 1.00 1 2 656.33295 1311.65862 0.48 34.63 7578 7578 MS2 14/20 Linfeng_081211_IgG_4.raw High EVEEISLLQPQVEESVLNLGK IPI:IPI00411937.4 4 1 CID 44.34 3.60 1.00 1 2 1177.13062 2353.25395 1.76 46.52 10771 10771 MS2 14/40 Linfeng_081211_IgG_4.raw High IINDNATYcR IPI:IPI00411937.4 4 1 CID C9(Carbamidomethyl) 51.14 3.47 1.00 1 2 620.29187 1239.57646 -1.79 23.24 4051 4051 MS2 13/18 Linfeng_081211_IgG_3.raw IPI:IPI00477227.3 520 56.8 6.02 "Isoform 1 of Keratin, type II cytoskeletal 78" 17.69 20 8 215.75 17.69 17 8 70.06 2.31 3 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High YLDFSSIITEVR 2 0 CID 79.69 4.61 1.00 1 2 721.87848 1442.74968 -2.04 46.20 5277 5277 MS2 19/22 Linfeng_091811_SIN3A_10.raw High YLDFSSIITEVR IPI:IPI00477227.3 2 1 CID 58.84 4.59 1.00 1 2 721.88086 1442.75444 1.26 45.80 10767 10767 MS2 19/22 Linfeng_081211_IgG_5.raw High YLDFSSIITEVR 2 0 CID 89.48 4.58 1.00 1 2 721.87970 1442.75212 -0.35 46.04 5446 5446 MS2 19/22 Linfeng_091811_SIN3A_1.raw High TLNNQFASFIDK IPI:IPI00477227.3 1 1 CID 70.21 4.33 1.00 1 2 699.35608 1397.70488 -0.81 37.54 8484 8484 MS2 17/22 Linfeng_081211_IgG_4.raw High YLDFSSIITEVR 2 0 CID 63.59 4.21 1.00 1 2 721.87830 1442.74932 -2.29 46.10 5460 5460 MS2 19/22 Linfeng_091811_SIN3A_3.raw High QNASLQAAITDAEQR IPI:IPI00477227.3 2 1 CID 60.19 4.18 1.00 1 2 808.40570 1615.80412 0.38 34.20 7836 7836 MS2 14/28 Linfeng_081211_IgG_3.raw High QNASLQAAITDAEQR IPI:IPI00477227.3 2 1 CID 49.38 4.15 1.00 1 2 808.40497 1615.80266 -0.53 40.83 6469 6469 MS2 16/28 Linfeng_081211_IgG_1.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 40.30 3.99 1.00 1 2 508.27414 1015.54100 -0.90 31.86 6724 6724 MS2 15/16 Linfeng_081211_IgG_6.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 41.46 3.94 1.00 1 2 508.27408 1015.54088 -1.02 32.71 7276 7276 MS2 15/16 Linfeng_081211_IgG_3.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 35.36 3.92 1.00 1 2 508.27505 1015.54283 0.91 32.89 6593 6593 MS2 15/16 Linfeng_081211_IgG_2.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 39.84 3.91 1.00 1 2 508.27368 1015.54009 -1.80 31.77 6540 6540 MS2 15/16 Linfeng_081211_IgG_5.raw High IEIDPQFQVVR IPI:IPI00477227.3 1 1 CID 73.30 3.91 1.00 1 2 672.36993 1343.73259 0.56 36.50 8319 8319 MS2 18/20 Linfeng_081211_IgG_6.raw High QNASLQAAITDAEQR IPI:IPI00477227.3 2 1 CID 75.43 3.87 1.00 1 2 808.40485 1615.80242 -0.68 33.44 7283 7283 MS2 14/28 Linfeng_081211_IgG_6.raw High QNASLQAAITDAEQR IPI:IPI00477227.3 2 1 CID 89.66 3.85 1.00 1 2 808.40448 1615.80168 -1.13 33.37 7183 7183 MS2 14/28 Linfeng_081211_IgG_4.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 45.29 3.78 1.00 1 2 508.27307 1015.53887 -3.00 31.89 6709 6709 MS2 15/16 Linfeng_081211_IgG_7.raw High AEAEALYQTK IPI:IPI00329306.3;IPI:IPI00477227.3;IPI:IPI00797452.2;IPI:IPI00942512.1 11 4 CID 57.82 3.76 1.00 1 2 562.28387 1123.56047 -2.27 24.63 4520 4520 MS2 15/18 Linfeng_081211_IgG_3.raw High LLcEYQELTSTK IPI:IPI00477227.3 2 1 CID C3(Carbamidomethyl) 51.05 3.73 1.00 1 2 742.86902 1484.73076 0.40 32.42 6921 6921 MS2 16/22 Linfeng_081211_IgG_6.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 41.75 3.69 1.00 1 2 508.27417 1015.54106 -0.84 40.59 6388 6388 MS2 15/16 Linfeng_081211_IgG_1.raw High ATLENDFVVLK IPI:IPI00477227.3 2 1 CID 60.73 3.53 1.00 1 2 624.84503 1248.68279 -0.56 45.82 7926 7926 MS2 13/20 Linfeng_081211_IgG_1.raw High VDELEAALR IPI:IPI00477227.3 2 1 CID 48.28 3.52 1.00 1 2 508.27426 1015.54125 -0.65 31.77 6651 6651 MS2 15/16 Linfeng_081211_IgG_4.raw IPI:IPI00005198.2 390 43.0 5.26 Interleukin enhancer-binding factor 2 42.82 29 9 142.55 31.28 18 7 62.11 27.44 6 6 75.00 21.28 5 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 112.38 7.00 1.00 1 3 700.36859 2099.09122 -3.22 41.89 4953 4953 MS2 33/76 Linfeng_091611_rIgG_6.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 86.33 6.70 1.00 1 3 700.37006 2099.09562 -1.13 41.43 9591 9591 MS2 29/76 Linfeng_081211_IgG_5.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 95.80 6.70 1.00 1 3 700.36896 2099.09232 -2.70 42.14 5132 5132 MS2 33/76 Linfeng_091811_SIN3A_5.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 83.39 6.55 1.00 1 3 700.36902 2099.09250 -2.61 42.22 4971 4971 MS2 26/76 Linfeng_091811_SIN3A_6.raw High INNVIDNLIVAPGTFEVQIEEVR IPI:IPI00005198.2 3 1 CID 87.45 6.12 1.00 1 3 861.46753 2582.38803 2.12 49.96 5936 5936 MS2 28/88 Linfeng_091811_SIN3A_6.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 67.83 5.92 1.00 1 3 700.37122 2099.09909 0.53 42.42 10136 10136 MS2 27/76 Linfeng_081211_IgG_6.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 69.01 5.91 1.00 1 2 1050.05176 2099.09624 -0.83 41.37 9572 9572 MS2 25/38 Linfeng_081211_IgG_5.raw High AQDPSEVLTmLTNETGFEISSSDATVK IPI:IPI00005198.2 1 1 CID M10(Oxidation) 62.81 5.75 1.00 1 3 962.79108 2886.35868 0.85 46.03 10837 10837 MS2 24/104 Linfeng_081211_IgG_5.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 47.10 5.68 1.00 1 3 700.37012 2099.09580 -1.04 41.64 10039 10039 MS2 23/76 Linfeng_081211_IgG_8.raw High ILGQEGDASYLASEISTWDGVIVTPSEK IPI:IPI00005198.2 1 1 CID 40.75 5.33 1.00 1 3 989.15784 2965.45896 -2.99 49.03 6013 6013 MS2 22/108 Linfeng_091811_SIN3A_5.raw High VKPAPDETSFSEALLK IPI:IPI00005198.2 3 1 CID 45.79 5.27 1.00 1 3 577.97455 1731.90909 -4.24 33.05 3804 3804 MS2 29/60 Linfeng_091611_rIgG_6.raw High GTmTTGHNVADLVVILK IPI:IPI00005198.2 3 1 CID M3(Oxidation) 85.96 5.10 1.00 1 3 595.65540 1784.95163 -3.34 36.46 4247 4247 MS2 33/64 Linfeng_091611_rIgG_6.raw High VKPAPDETSFSEALLK IPI:IPI00005198.2 3 1 CID 34.56 5.06 1.00 1 3 577.97595 1731.91330 -1.81 33.41 7146 7146 MS2 24/60 Linfeng_081211_IgG_5.raw High NQDLAPNSAEQASILSLVTK IPI:IPI00005198.2 3 1 CID 51.41 4.68 1.00 1 3 700.37231 2099.10239 2.10 41.73 10063 10063 MS2 23/76 Linfeng_081211_IgG_7.raw High ILGQEGDASYLASEISTWDGVIVTPSEK IPI:IPI00005198.2 1 1 CID 38.62 4.61 1.00 1 3 989.15967 2965.46445 -1.14 48.79 5811 5811 MS2 23/108 Linfeng_091611_rIgG_6.raw High INNVIDNLIVAPGTFEVQIEEVR IPI:IPI00005198.2 3 1 CID 54.00 4.52 1.00 1 3 861.46832 2582.39042 3.04 49.38 11650 11650 MS2 22/88 Linfeng_081211_IgG_5.raw High WFEENASQSTVK IPI:IPI00005198.2 1 1 CID 42.85 4.34 1.00 1 2 713.33417 1425.66106 -2.44 28.06 3137 3137 MS2 20/22 Linfeng_091611_rIgG_6.raw High WFEENASQSTVK IPI:IPI00005198.2 1 1 CID 85.77 4.30 1.00 1 2 713.33344 1425.65959 -3.47 28.21 3263 3263 MS2 19/22 Linfeng_091811_SIN3A_5.raw High ILPTLEAVAALGNK IPI:IPI00005198.2 2 1 CID 86.15 4.29 1.00 1 2 705.41980 1409.83232 -2.84 41.62 4917 4917 MS2 22/26 Linfeng_091611_rIgG_6.raw High AQDPSEVLTmLTNETGFEISSSDATVK IPI:IPI00005198.2 1 1 CID M10(Oxidation) 36.77 4.21 1.00 1 3 962.79272 2886.36362 2.56 46.34 11319 11319 MS2 22/104 Linfeng_081211_IgG_6.raw High ILPTLEAVAALGNK IPI:IPI00005198.2 2 1 CID 81.93 4.19 1.00 1 2 705.42090 1409.83452 -1.28 41.52 9618 9618 MS2 20/26 Linfeng_081211_IgG_5.raw High ILPTLEAVAALGNK IPI:IPI00005198.2 2 1 CID 50.09 4.10 1.00 1 3 470.61639 1409.83463 -1.20 41.56 9629 9629 MS2 24/52 Linfeng_081211_IgG_5.raw High WFEENASQSTVK IPI:IPI00005198.2 1 1 CID 37.57 4.01 1.00 1 2 713.33508 1425.66289 -1.16 28.90 5544 5544 MS2 16/22 Linfeng_081211_IgG_5.raw High ILPTLEAVAALGNK IPI:IPI00005198.2 2 1 CID 47.86 3.96 1.00 1 2 705.41925 1409.83122 -3.62 41.84 10090 10090 MS2 18/26 Linfeng_081211_IgG_8.raw High VLQSALAAIR IPI:IPI00005198.2 1 1 CID 54.90 3.94 1.00 1 2 521.32397 1041.64067 -0.85 32.65 6983 6983 MS2 17/18 Linfeng_081211_IgG_7.raw High WFEENASQSTVK IPI:IPI00005198.2 1 1 CID 43.35 3.90 1.00 1 2 713.33490 1425.66252 -1.42 28.86 5732 5732 MS2 18/22 Linfeng_081211_IgG_6.raw High VLQSALAAIR IPI:IPI00005198.2 1 1 CID 60.26 3.88 1.00 1 2 521.32367 1041.64006 -1.44 32.57 6981 6981 MS2 16/18 Linfeng_081211_IgG_6.raw High ILPTLEAVAALGNK IPI:IPI00005198.2 2 1 CID 91.64 3.87 1.00 1 2 705.42291 1409.83855 1.58 41.94 10129 10129 MS2 17/26 Linfeng_081211_IgG_7.raw High VKPAPDETSFSEALLK IPI:IPI00005198.2 3 1 CID 89.60 3.48 1.00 1 2 866.46075 1731.91423 -1.27 33.47 7165 7165 MS2 15/30 Linfeng_081211_IgG_5.raw IPI:IPI00015953.3 783 87.3 9.28 Isoform 1 of Nucleolar RNA helicase 2 24.01 30 14 242.70 21.20 18 13 100.31 9.32 5 4 149.30 12.13 7 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GAVEALAAALAHISGATSVDQR 2 0 CID 107.98 7.13 1.00 1 3 703.37268 2108.10349 -2.89 48.69 5236 5236 MS2 38/84 Linfeng_091611_rIgG_3.raw High GAVEALAAALAHISGATSVDQR IPI:IPI00477179.1 2 1 CID 79.22 6.97 1.00 1 3 703.37329 2108.10532 -2.02 48.96 5817 5817 MS2 38/84 Linfeng_091811_SIN3A_3.raw High GAVEALAAALAHISGATSVDQR 2 0 CID 56.23 5.80 1.00 1 3 703.37421 2108.10807 -0.71 48.74 5871 5871 MS2 37/84 Linfeng_091611_rIgG_4.raw High LGVcFDVPTASVTEIQEK IPI:IPI00477179.1 2 1 CID C4(Carbamidomethyl) 92.73 5.77 1.00 1 2 996.99701 1992.98674 -4.03 39.07 4565 4565 MS2 25/34 Linfeng_091811_SIN3A_3.raw High LGVcFDVPTASVTEIQEK 2 0 CID C4(Carbamidomethyl) 72.75 5.62 1.00 1 2 996.99615 1992.98503 -4.88 38.95 4011 4011 MS2 19/34 Linfeng_091611_rIgG_3.raw High WQLSVATEQPELEGPR IPI:IPI00477179.1 2 1 CID 61.49 5.62 1.00 1 2 920.46100 1839.91472 -4.85 36.96 4291 4291 MS2 18/30 Linfeng_091811_SIN3A_3.raw High SDKTEEIAEEEETVFPK IPI:IPI00015953.3 1 1 CID 39.38 5.56 1.00 1 3 660.98138 1980.92960 0.54 34.67 8018 8018 MS2 28/64 Linfeng_081211_IgG_3.raw High WQLSVATEQPELEGPR 2 0 CID 114.47 5.52 1.00 1 2 920.46289 1839.91850 -2.79 36.68 3721 3721 MS2 22/30 Linfeng_091611_rIgG_3.raw High GLDIPEVDLVIQSSPPK 2 0 CID 72.02 5.21 1.00 1 3 602.99823 1806.98014 -2.61 43.00 4527 4527 MS2 29/64 Linfeng_091611_rIgG_3.raw High GLDIPEVDLVIQSSPPK IPI:IPI00477179.1 2 1 CID 98.78 5.15 1.00 1 3 602.99866 1806.98142 -1.90 43.23 5097 5097 MS2 31/64 Linfeng_091811_SIN3A_3.raw High LGVcFDVPTASVTEIQEK IPI:IPI00015953.3 2 1 CID C4(Carbamidomethyl) 99.22 5.14 1.00 1 2 997.00110 1992.99492 0.08 39.90 9808 9808 MS2 19/34 Linfeng_081211_IgG_3.raw High EEYQLVQVEQK IPI:IPI00015953.3 2 1 CID 49.39 5.00 1.00 1 2 696.85242 1392.69756 -2.17 30.38 6416 6416 MS2 17/20 Linfeng_081211_IgG_3.raw High KEAQELSQNSAIK IPI:IPI00015953.3 2 1 CID 28.54 4.59 1.00 1 2 723.38391 1445.76055 0.72 20.69 3158 3158 MS2 17/24 Linfeng_081211_IgG_3.raw High WQLSVATEQPELEGPR IPI:IPI00015953.3 2 1 CID 53.04 4.57 1.00 1 2 920.46661 1839.92595 1.26 37.78 9120 9120 MS2 16/30 Linfeng_081211_IgG_3.raw High EEYQLVQVEQK IPI:IPI00477179.1 2 1 CID 52.27 4.54 1.00 1 2 696.85199 1392.69670 -2.78 29.10 3255 3255 MS2 17/20 Linfeng_091811_SIN3A_3.raw High LGVcFDVPTASVTEIQEK IPI:IPI00015953.3 2 1 CID C4(Carbamidomethyl) 27.91 4.46 1.00 1 3 665.00275 1992.99369 -0.54 39.89 9804 9804 MS2 21/68 Linfeng_081211_IgG_3.raw High LGVcFDVPTASVTEIQEK IPI:IPI00477179.1 2 1 CID C4(Carbamidomethyl) 69.83 4.44 1.00 1 3 665.00006 1992.98563 -4.58 39.07 4564 4564 MS2 30/68 Linfeng_091811_SIN3A_3.raw High KAEPSEVDmNSPK IPI:IPI00015953.3 1 1 CID M9(Oxidation) 15.00 4.24 1.00 1 3 483.22937 1447.67356 0.10 17.25 2060 2060 MS2 20/48 Linfeng_081211_IgG_3.raw High EEYQLVQVEQK IPI:IPI00015953.3 2 1 CID 45.08 4.16 1.00 1 2 696.85364 1392.70000 -0.42 29.65 5940 5940 MS2 16/20 Linfeng_081211_IgG_4.raw High STYEQVDLIGK IPI:IPI00477179.1 2 1 CID 56.74 4.13 1.00 1 2 626.82245 1252.63762 -3.50 30.62 3461 3461 MS2 17/20 Linfeng_091811_SIN3A_3.raw High GLDIPEVDLVIQSSPPK IPI:IPI00015953.3 2 1 CID 73.42 3.96 1.00 1 2 903.99780 1806.98833 1.92 43.72 11112 11112 MS2 19/32 Linfeng_081211_IgG_3.raw High LGVcFDVPTASVTEIQEK IPI:IPI00015953.3 2 1 CID C4(Carbamidomethyl) 46.51 3.90 1.00 1 2 997.00238 1992.99748 1.36 39.10 8977 8977 MS2 15/34 Linfeng_081211_IgG_4.raw High STYEQVDLIGK IPI:IPI00015953.3 2 1 CID 60.65 3.86 1.00 1 2 626.82385 1252.64043 -1.26 31.14 6456 6456 MS2 15/20 Linfeng_081211_IgG_4.raw High NEEPSEEEIDAPKPK IPI:IPI00015953.3 2 1 CID 66.84 3.81 1.00 1 2 856.40430 1711.80132 -0.51 23.60 4179 4179 MS2 21/28 Linfeng_081211_IgG_3.raw High STYEQVDLIGK IPI:IPI00015953.3 2 1 CID 58.06 3.70 1.00 1 2 626.82465 1252.64202 0.01 31.96 6991 6991 MS2 17/20 Linfeng_081211_IgG_3.raw High NGIDILVGTPGR IPI:IPI00015953.3;IPI:IPI00031554.1 3 2 CID 57.57 3.68 1.00 1 2 606.34100 1211.67473 0.33 36.54 8674 8674 MS2 16/22 Linfeng_081211_IgG_3.raw High APQVLVLAPTR IPI:IPI00015953.3 2 1 CID 65.76 3.65 1.00 1 2 582.85754 1164.70781 -1.86 32.89 6955 6955 MS2 13/20 Linfeng_081211_IgG_5.raw High GVTFLFPIQAK IPI:IPI00015953.3 2 1 CID 28.43 3.59 1.00 1 2 610.85455 1220.70183 -1.64 42.19 9805 9805 MS2 10/20 Linfeng_081211_IgG_5.raw High STYEQVDLIGKK IPI:IPI00015953.3 2 1 CID 59.91 3.59 1.00 1 2 690.87201 1380.73674 -0.17 29.09 5921 5921 MS2 14/22 Linfeng_081211_IgG_3.raw High APQVLVLAPTR IPI:IPI00015953.3 2 1 CID 71.93 3.52 1.00 1 2 582.85718 1164.70708 -2.49 33.76 7672 7672 MS2 13/20 Linfeng_081211_IgG_3.raw IPI:IPI00217709.1 1621 182.5 8.06 Isoform Beta-1 of DNA topoisomerase 2-beta 18.26 50 21 342.85 7.34 18 9 346.09 11.66 17 12 241.43 9.75 15 12 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SQDFGNLFSFPSYSQK IPI:IPI00217709.1 2 1 CID 110.87 6.50 1.00 1 2 926.42902 1851.85076 -2.22 43.11 4948 4948 MS2 20/30 Linfeng_091611_rIgG_2.raw High GFQQISFVNSIATTK IPI:IPI00217709.1 5 1 CID 66.16 5.92 1.00 1 3 547.62439 1640.85862 -3.47 38.33 4338 4338 MS2 29/56 Linfeng_091611_rIgG_2.raw High RLHGLPEQFLYGTATK IPI:IPI00925477.1 5 1 CID 40.91 5.72 1.00 1 3 610.99774 1830.97867 -4.09 32.57 3674 3674 MS2 24/60 Linfeng_091811_SIN3A_2.raw High AASNcGIVESILNWVK IPI:IPI00925477.1 5 1 CID C5(Carbamidomethyl) 90.75 5.32 1.00 1 2 880.95416 1760.90105 0.56 51.54 6110 6110 MS2 20/30 Linfeng_091811_SIN3A_2.raw High ImIMTDQDQDGSHIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID M2(Oxidation) 66.48 5.26 1.00 1 3 583.26874 1747.79166 -4.22 25.50 2711 2711 MS2 28/56 Linfeng_091811_SIN3A_2.raw High AASNcGIVESILNWVK IPI:IPI00217709.1 5 1 CID C5(Carbamidomethyl) 76.71 5.23 1.00 1 2 880.95258 1760.89787 -1.24 51.23 5963 5963 MS2 20/30 Linfeng_091611_rIgG_2.raw High GFQQISFVNSIATTK IPI:IPI00217709.1 5 1 CID 90.26 5.12 1.00 1 2 820.93219 1640.85710 -4.39 38.34 4339 4339 MS2 22/28 Linfeng_091611_rIgG_2.raw High ImIMTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID M2(Oxidation) 68.68 5.01 1.00 1 3 583.26898 1747.79239 -3.80 25.42 2651 2651 MS2 28/56 Linfeng_091611_rIgG_2.raw High HVDYVVDQVVGK IPI:IPI00217709.1 5 1 CID 80.26 5.01 1.00 1 2 679.35712 1357.70696 -3.05 28.58 3073 3073 MS2 20/22 Linfeng_091611_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK IPI:IPI00217709.1 5 1 CID 140.62 5.00 1.00 1 3 829.74725 2487.22721 -0.74 52.95 6159 6159 MS2 31/84 Linfeng_091611_rIgG_2.raw High HGFLEEFITPIVK IPI:IPI00217709.1 5 1 CID 83.52 4.99 1.00 1 2 765.42010 1529.83293 -2.21 43.21 4961 4961 MS2 19/24 Linfeng_091611_rIgG_2.raw High ImImTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID "M2(Oxidation), M4(Oxidation)" 96.10 4.91 1.00 1 3 588.59924 1763.78318 -6.11 22.40 2228 2228 MS2 30/56 Linfeng_091611_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK IPI:IPI00217709.1 5 1 CID 61.36 4.81 1.00 1 3 829.74786 2487.22904 -0.01 53.07 5776 5776 MS2 31/84 Linfeng_091611_rIgG_3.raw High HGFLEEFITPIVK IPI:IPI00925477.1 5 1 CID 33.90 4.80 1.00 1 3 510.61536 1529.83152 -3.13 43.31 5073 5073 MS2 26/48 Linfeng_091811_SIN3A_2.raw High KEWLVGmLGAESTK IPI:IPI00217709.1 6 1 CID M7(Oxidation) 35.53 4.76 1.00 1 3 522.27112 1564.79880 -3.35 31.63 3478 3478 MS2 28/52 Linfeng_091611_rIgG_2.raw High SLAVSGLGVIGR IPI:IPI00217709.1 5 1 CID 57.21 4.67 1.00 1 2 564.83850 1128.66973 -3.43 35.26 3944 3944 MS2 20/22 Linfeng_091611_rIgG_2.raw High ImImTDQDQDGSHIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID "M2(Oxidation), M4(Oxidation)" 81.99 4.64 1.00 1 3 588.60010 1763.78574 -4.66 22.66 2317 2317 MS2 32/56 Linfeng_091811_SIN3A_2.raw High IFDEILVNAADNK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 66.27 4.63 1.00 1 2 731.38037 1461.75347 -3.42 38.18 4412 4412 MS2 20/24 Linfeng_091811_SIN3A_2.raw High LQLEETmPSPYGR IPI:IPI00217709.1 3 1 CID M7(Oxidation) 71.46 4.62 1.00 1 2 768.86969 1536.73210 -2.75 28.67 3085 3085 MS2 18/24 Linfeng_091611_rIgG_2.raw High SLAVSGLGVIGR IPI:IPI00925477.1 5 1 CID 64.65 4.62 1.00 1 2 564.83838 1128.66948 -3.65 35.49 4058 4058 MS2 20/22 Linfeng_091811_SIN3A_2.raw High IFDEILVNAADNK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID 56.72 4.61 1.00 1 2 731.38129 1461.75530 -2.16 37.91 4284 4284 MS2 19/24 Linfeng_091611_rIgG_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 44.85 4.59 1.00 1 2 731.38397 1461.76067 1.51 38.18 8778 8778 MS2 19/24 Linfeng_081211_IgG_10.raw High VYVPALIFGQLLTSSNYDDDEK IPI:IPI00925477.1 5 1 CID 43.85 4.56 1.00 1 3 829.74799 2487.22940 0.14 53.25 6307 6307 MS2 27/84 Linfeng_091811_SIN3A_2.raw High HGFLEEFITPIVK IPI:IPI00217709.1 5 1 CID 28.21 4.54 1.00 1 3 510.61560 1529.83225 -2.66 43.11 4949 4949 MS2 26/48 Linfeng_091611_rIgG_2.raw High VEFDEEFSGAPVEGAGEEALTPSVPINK IPI:IPI00217709.1 2 1 CID 38.76 4.53 1.00 1 3 973.46967 2918.39444 0.03 40.00 4552 4552 MS2 21/108 Linfeng_091611_rIgG_2.raw High KEWLTNFMEDR IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 38.19 4.51 1.00 1 3 490.23312 1468.68482 -2.85 36.91 4246 4246 MS2 24/40 Linfeng_091811_SIN3A_2.raw High GFQQISFVNSIATTK IPI:IPI00925477.1 5 1 CID 54.11 4.48 1.00 1 2 820.93597 1640.86467 0.22 46.22 8048 8048 MS2 17/28 Linfeng_081211_IgG_1.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 44.28 4.39 1.00 1 2 731.38293 1461.75859 0.09 38.54 8799 8799 MS2 18/24 Linfeng_081211_IgG_4.raw High SLAVSGLGVIGR IPI:IPI00925477.1 5 1 CID 47.61 4.39 1.00 1 2 564.84064 1128.67400 0.35 37.37 7849 7849 MS2 18/22 Linfeng_081211_IgG_2.raw High AASNcGIVESILNWVK IPI:IPI00925477.1 5 1 CID C5(Carbamidomethyl) 48.06 4.34 1.00 1 3 587.63806 1760.89963 -0.25 51.46 6101 6101 MS2 25/60 Linfeng_091811_SIN3A_2.raw High GFQQISFVNSIATTK IPI:IPI00925477.1 5 1 CID 6.56 4.34 1.00 1 3 547.62463 1640.85935 -3.02 38.64 4471 4471 MS2 22/56 Linfeng_091811_SIN3A_2.raw High LHGLPEQFLYGTATK IPI:IPI00925477.1 5 1 CID 67.21 4.33 1.00 1 3 558.96472 1674.87961 -3.24 35.07 4002 4002 MS2 27/56 Linfeng_091811_SIN3A_2.raw High LAQAEAAGLHK IPI:IPI00925477.1 5 1 CID 43.84 4.32 1.00 1 3 370.20831 1108.61039 -0.55 20.73 2943 2943 MS2 21/40 Linfeng_081211_IgG_2.raw High ImImTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID "M2(Oxidation), M4(Oxidation)" 77.34 4.28 1.00 1 2 882.39746 1763.78765 -3.58 22.56 2250 2250 MS2 19/28 Linfeng_091611_rIgG_2.raw High SLAVSGLGVIGR IPI:IPI00925477.1 5 1 CID 47.81 4.24 1.00 1 2 564.84033 1128.67339 -0.19 44.61 7562 7562 MS2 19/22 Linfeng_081211_IgG_1.raw High SLAVSGLGVIGR IPI:IPI00925477.1 5 1 CID 49.96 4.21 1.00 1 2 564.84021 1128.67314 -0.41 36.49 8657 8657 MS2 19/22 Linfeng_081211_IgG_3.raw High QImENAEINNIIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID M3(Oxidation) 48.44 4.18 1.00 1 2 773.39838 1545.78948 -3.05 32.55 3671 3671 MS2 18/24 Linfeng_091811_SIN3A_2.raw High ELILFSNSDNER IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 75.09 4.13 1.00 1 2 718.85449 1436.70171 0.03 37.43 8986 8986 MS2 19/22 Linfeng_081211_IgG_3.raw High ELILFSNSDNER IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 28.45 4.11 1.00 1 2 718.85156 1436.69585 -4.05 36.11 4142 4142 MS2 19/22 Linfeng_091811_SIN3A_2.raw High ELILFSNSDNER IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 61.69 4.08 1.00 1 2 718.85236 1436.69744 -2.94 36.27 4163 4163 MS2 19/22 Linfeng_091811_SIN3A_2.raw High YAGPEDDAAITLAFSK IPI:IPI00925477.1 5 1 CID 77.06 3.93 1.00 1 2 834.90985 1668.81243 0.48 45.44 7812 7812 MS2 17/30 Linfeng_081211_IgG_1.raw High NTVEITELPVR IPI:IPI00925477.1 5 1 CID 36.41 3.83 1.00 1 2 635.85303 1270.69878 -1.12 33.94 7735 7735 MS2 15/20 Linfeng_081211_IgG_3.raw High HVDYVVDQVVGK IPI:IPI00925477.1 5 1 CID 58.35 3.82 1.00 1 2 679.35809 1357.70891 -1.61 31.09 6666 6666 MS2 16/22 Linfeng_081211_IgG_3.raw High NTVEITELPVR IPI:IPI00925477.1 5 1 CID 33.82 3.78 1.00 1 2 635.85345 1270.69963 -0.45 41.14 6552 6552 MS2 15/20 Linfeng_081211_IgG_1.raw High ELILFSNSDNER IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 68.68 3.77 1.00 1 2 718.85547 1436.70366 1.39 38.09 8068 8068 MS2 18/22 Linfeng_081211_IgG_2.raw High LAQAEAAGLHK IPI:IPI00925477.1 5 1 CID 61.68 3.74 1.00 1 2 554.80908 1108.61089 -0.09 20.80 2963 2963 MS2 15/20 Linfeng_081211_IgG_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 54.59 3.71 1.00 1 2 731.38336 1461.75945 0.67 39.20 9583 9583 MS2 17/24 Linfeng_081211_IgG_3.raw High VSIDPESNIISIWNNGK IPI:IPI00925477.1 5 1 CID 12.48 3.68 1.00 1 2 943.48779 1885.96831 1.49 49.55 8925 8925 MS2 13/32 Linfeng_081211_IgG_1.raw High NTVEITELPVR IPI:IPI00925477.1 5 1 CID 34.23 3.61 1.00 1 2 635.85455 1270.70183 1.28 34.29 6992 6992 MS2 14/20 Linfeng_081211_IgG_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 43.22 3.54 1.00 1 2 731.38342 1461.75957 0.76 39.61 8497 8497 MS2 20/24 Linfeng_081211_IgG_2.raw IPI:IPI00414696.1 341 36.0 8.65 Isoform A2 of Heterogeneous nuclear ribonucleoproteins A2/B1 37.83 46 9 237.37 30.50 18 6 222.52 30.50 13 7 202.59 30.50 15 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GFGDGYNGYGGGPGGGNFGGSPGYGGGR 2 0 CID 176.34 8.84 1.00 1 3 832.34918 2495.03299 -2.67 33.14 3805 3805 MS2 37/108 Linfeng_091811_SIN3A_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR IPI:IPI00414696.1 2 1 CID 146.54 8.52 1.00 1 3 832.35028 2495.03629 -1.35 33.03 7140 7140 MS2 35/108 Linfeng_081211_IgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR IPI:IPI00414696.1 2 1 CID 123.25 8.03 1.00 1 3 832.34882 2495.03189 -3.11 33.07 3806 3806 MS2 36/108 Linfeng_091611_rIgG_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID M2(Oxidation) 134.63 7.42 1.00 1 3 735.96960 2205.89426 -2.77 24.76 2685 2685 MS2 40/96 Linfeng_091611_rIgG_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR 3 0 CID M2(Oxidation) 169.05 7.12 1.00 1 2 1103.44983 2205.89238 -3.62 24.97 2704 2704 MS2 27/48 Linfeng_091811_SIN3A_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID M2(Oxidation) 151.76 6.80 1.00 1 2 1103.45081 2205.89433 -2.74 24.81 2692 2692 MS2 27/48 Linfeng_091611_rIgG_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR 3 0 CID M2(Oxidation) 108.72 6.69 1.00 1 3 735.96942 2205.89371 -3.02 24.85 2687 2687 MS2 40/96 Linfeng_091811_SIN3A_6.raw High NMGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID 99.11 6.68 1.00 1 3 730.63654 2189.89505 -4.75 27.15 3014 3014 MS2 40/96 Linfeng_091611_rIgG_6.raw High NMGGPYGGGNYGPGGSGGSGGYGGR 3 0 CID 96.44 6.65 1.00 1 3 730.63525 2189.89121 -6.51 27.32 3023 3023 MS2 38/96 Linfeng_091811_SIN3A_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID M2(Oxidation) 147.24 6.53 1.00 1 2 1103.45142 2205.89556 -2.19 24.85 4573 4573 MS2 28/48 Linfeng_081211_IgG_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID M2(Oxidation) 64.22 6.52 1.00 1 3 735.97046 2205.89682 -1.61 24.86 4574 4574 MS2 30/96 Linfeng_081211_IgG_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID M2(Oxidation) 93.28 6.28 1.00 1 3 735.97052 2205.89701 -1.53 24.72 2631 2631 MS2 33/96 Linfeng_091611_rIgG_7.raw High DYFEEYGKIDTIEIITDR IPI:IPI00414696.1 3 1 CID 46.54 6.19 1.00 1 3 740.69397 2220.06736 -1.53 42.67 5053 5053 MS2 32/68 Linfeng_091611_rIgG_6.raw High NMGGPYGGGNYGPGGSGGSGGYGGR IPI:IPI00414696.1 3 1 CID 143.01 6.02 1.00 1 2 1095.45007 2189.89287 -5.75 27.21 3022 3022 MS2 21/48 Linfeng_091611_rIgG_6.raw High LFIGGLSFETTEESLR 3 0 CID 103.62 5.97 1.00 1 2 899.96143 1798.91557 -3.71 44.05 5101 5101 MS2 25/30 Linfeng_091811_SIN3A_9.raw High LFIGGLSFETTEESLR 3 0 CID 96.06 5.88 1.00 1 2 899.96185 1798.91643 -3.23 43.93 5186 5186 MS2 25/30 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTEESLR 3 0 CID 114.81 5.83 1.00 1 2 899.96234 1798.91741 -2.69 43.98 4974 4974 MS2 25/30 Linfeng_091811_SIN3A_7.raw High KLFIGGLSFETTEESLR IPI:IPI00414696.1 3 1 CID 44.00 5.81 1.00 1 3 643.00946 1927.01383 -1.76 39.38 4550 4550 MS2 29/64 Linfeng_091611_rIgG_7.raw High LFIGGLSFETTEESLR IPI:IPI00414696.1 3 1 CID 101.39 5.78 1.00 1 2 899.96216 1798.91704 -2.89 43.64 5175 5175 MS2 24/30 Linfeng_091611_rIgG_6.raw High DYFEEYGKIDTIEIITDR 3 0 CID 42.34 5.74 1.00 1 3 740.69305 2220.06461 -2.77 42.94 4844 4844 MS2 28/68 Linfeng_091811_SIN3A_7.raw High LFIGGLSFETTEESLR 3 0 CID 80.44 5.72 1.00 1 2 899.96204 1798.91680 -3.03 43.95 4996 4996 MS2 22/30 Linfeng_091811_SIN3A_10.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR IPI:IPI00414696.1 2 1 CID 99.88 5.61 1.00 1 2 1248.02209 2495.03691 -1.10 32.99 7126 7126 MS2 20/54 Linfeng_081211_IgG_6.raw High KLFIGGLSFETTEESLR IPI:IPI00414696.1 3 1 CID 42.70 5.44 1.00 1 3 643.00836 1927.01053 -3.47 39.45 4638 4638 MS2 30/64 Linfeng_091611_rIgG_6.raw High DYFEEYGKIDTIEIITDR 3 0 CID 65.13 5.14 1.00 1 3 740.69336 2220.06552 -2.35 42.98 5068 5068 MS2 26/68 Linfeng_091811_SIN3A_6.raw High RGFGFVTFDDHDPVDK IPI:IPI00414696.1 3 1 CID 81.27 4.89 1.00 1 3 617.95813 1851.85984 -3.40 34.23 3959 3959 MS2 28/60 Linfeng_091611_rIgG_6.raw High DYFEEYGKIDTIEIITDR IPI:IPI00414696.1 3 1 CID 84.47 4.75 1.00 1 3 740.69421 2220.06809 -1.20 42.69 4974 4974 MS2 22/68 Linfeng_091611_rIgG_7.raw High KLFIGGLSFETTEESLR 3 0 CID 39.89 4.59 1.00 1 3 643.00891 1927.01218 -2.61 39.70 4649 4649 MS2 31/64 Linfeng_091811_SIN3A_6.raw High RGFGFVTFDDHDPVDK 3 0 CID 49.60 4.57 1.00 1 3 617.95782 1851.85892 -3.89 34.47 3976 3976 MS2 26/60 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTEESLR 3 0 CID 37.57 4.56 1.00 1 3 600.31061 1798.91727 -2.76 43.99 5194 5194 MS2 32/60 Linfeng_091811_SIN3A_6.raw High LFIGGLSFETTEESLR 3 0 CID 37.95 4.49 1.00 1 3 600.31036 1798.91654 -3.17 44.13 4993 4993 MS2 31/60 Linfeng_091811_SIN3A_7.raw High LFIGGLSFETTEESLR IPI:IPI00414696.1 3 1 CID 74.55 4.37 1.00 1 2 899.96704 1798.92681 2.54 43.49 10529 10529 MS2 20/30 Linfeng_081211_IgG_10.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 49.97 4.27 1.00 1 2 594.82538 1188.64348 -3.05 35.82 7987 7987 MS2 16/18 Linfeng_081211_IgG_10.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 30.60 4.18 1.00 1 2 594.82489 1188.64250 -3.87 35.74 3992 3992 MS2 17/18 Linfeng_091611_rIgG_9.raw High IDTIEIITDR 3 0 CID 62.11 4.12 1.00 1 2 594.82483 1188.64238 -3.97 36.07 4085 4085 MS2 17/18 Linfeng_091811_SIN3A_9.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 62.11 3.98 1.00 1 2 594.82532 1188.64336 -3.15 36.20 8223 8223 MS2 17/18 Linfeng_081211_IgG_7.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 59.57 3.90 1.00 1 2 594.82697 1188.64665 -0.38 35.77 8282 8282 MS2 17/18 Linfeng_081211_IgG_8.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 48.15 3.90 1.00 1 2 594.82690 1188.64653 -0.48 36.09 8190 8190 MS2 15/18 Linfeng_081211_IgG_6.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 62.60 3.83 1.00 1 2 594.82593 1188.64458 -2.12 35.87 7988 7988 MS2 17/18 Linfeng_081211_IgG_5.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 66.67 3.78 1.00 1 2 594.82581 1188.64433 -2.33 34.42 7638 7638 MS2 16/18 Linfeng_081211_IgG_6.raw High GGGGNFGPGPGSNFR IPI:IPI00414696.1 3 1 CID 25.28 3.76 1.00 1 2 689.31744 1377.62761 -1.39 27.53 5074 5074 MS2 15/28 Linfeng_081211_IgG_5.raw High GGNFGFGDSR IPI:IPI00414696.1 3 1 CID 46.01 3.69 1.00 1 2 507.22415 1013.44103 -2.53 28.82 5718 5718 MS2 15/18 Linfeng_081211_IgG_6.raw High GGGGNFGPGPGSNFR IPI:IPI00414696.1 3 1 CID 6.28 3.65 1.00 1 2 689.31787 1377.62847 -0.77 30.71 6356 6356 MS2 12/28 Linfeng_081211_IgG_6.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 46.92 3.64 1.00 1 2 594.82678 1188.64629 -0.68 38.26 6565 6565 MS2 17/18 Linfeng_081211_IgG_9.raw High IDTIEIITDR IPI:IPI00414696.1 3 1 CID 53.47 3.56 1.00 1 2 594.82727 1188.64726 0.14 36.85 8790 8790 MS2 15/18 Linfeng_081211_IgG_3.raw High GGGGNFGPGPGSNFR IPI:IPI00414696.1 3 1 CID 14.45 3.55 1.00 1 2 689.31738 1377.62749 -1.48 28.40 5712 5712 MS2 13/28 Linfeng_081211_IgG_3.raw High GGGGNFGPGPGSNFR IPI:IPI00414696.1 3 1 CID 31.19 3.48 1.00 1 2 689.31702 1377.62676 -2.01 26.95 5265 5265 MS2 16/28 Linfeng_081211_IgG_8.raw IPI:IPI00007765.5 679 73.6 6.16 "Stress-70 protein, mitochondrial" 35.49 57 16 255.98 26.36 20 12 263.10 30.78 21 14 277.66 19.44 16 9 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High STNGDTFLGGEDFDQALLR 2 0 CID 126.58 7.47 1.00 1 2 1028.48157 2055.95586 -2.93 42.28 4996 4996 MS2 25/36 Linfeng_091811_SIN3A_4.raw High STNGDTFLGGEDFDQALLR IPI:IPI00007765.5 2 1 CID 130.33 7.14 1.00 1 2 1028.48206 2055.95683 -2.46 42.03 5030 5030 MS2 24/36 Linfeng_091611_rIgG_4.raw High STNGDTFLGGEDFDQALLR 2 0 CID 99.44 6.52 1.00 1 3 685.99036 2055.95652 -2.61 42.27 4995 4995 MS2 36/72 Linfeng_091811_SIN3A_4.raw High STNGDTFLGGEDFDQALLR IPI:IPI00007765.5 2 1 CID 112.85 6.42 1.00 1 3 685.99005 2055.95560 -3.06 42.02 5029 5029 MS2 35/72 Linfeng_091611_rIgG_4.raw High SQVFSTAADGQTQVEIK IPI:IPI00007765.5 2 1 CID 56.99 6.01 1.00 1 2 904.95203 1808.89678 -3.20 30.10 3472 3472 MS2 22/32 Linfeng_091611_rIgG_4.raw High SQVFSTAADGQTQVEIK IPI:IPI00007765.5 2 1 CID 59.59 5.99 1.00 1 3 603.63861 1808.90128 -0.71 30.52 6229 6229 MS2 33/64 Linfeng_081211_IgG_4.raw High VINEPTAAALAYGLDK 1 0 CID 92.95 5.95 1.00 1 3 549.29633 1645.87442 -3.17 37.06 4323 4323 MS2 33/60 Linfeng_091811_SIN3A_4.raw High VINEPTAAALAYGLDK IPI:IPI00007765.5 1 1 CID 85.46 5.89 1.00 1 3 549.29614 1645.87387 -3.50 36.67 4332 4332 MS2 38/60 Linfeng_091611_rIgG_4.raw High LYSPSQIGAFVLmK 1 0 CID M13(Oxidation) 75.37 5.89 1.00 1 3 523.94843 1569.83072 -2.47 41.91 4947 4947 MS2 32/52 Linfeng_091811_SIN3A_4.raw High ERVEAVNmAEGIIHDTETK IPI:IPI00007765.5 2 1 CID M8(Oxidation) 46.58 5.87 1.00 1 3 720.01721 2158.03708 -3.48 30.22 3489 3489 MS2 31/72 Linfeng_091611_rIgG_4.raw High SQVFSTAADGQTQVEIK 2 0 CID 70.31 5.81 1.00 1 2 904.95264 1808.89800 -2.52 30.07 3416 3416 MS2 24/32 Linfeng_091811_SIN3A_4.raw High VINEPTAAALAYGLDK 1 0 CID 95.08 5.64 1.00 1 2 823.44073 1645.87419 -3.31 37.16 4336 4336 MS2 24/30 Linfeng_091811_SIN3A_4.raw High mKETAENYLGHTAK IPI:IPI00007765.5 2 1 CID M1(Oxidation) 48.74 5.62 1.00 1 3 536.92615 1608.76389 -2.99 19.36 1991 1991 MS2 29/52 Linfeng_091611_rIgG_4.raw High LYSPSQIGAFVLmK IPI:IPI00007765.5 1 1 CID M13(Oxidation) 78.04 5.49 1.00 1 3 523.94800 1569.82944 -3.28 41.56 4969 4969 MS2 32/52 Linfeng_091611_rIgG_4.raw High VINEPTAAALAYGLDK IPI:IPI00007765.5 1 1 CID 62.50 5.46 1.00 1 3 549.29779 1645.87882 -0.50 36.85 8240 8240 MS2 29/60 Linfeng_081211_IgG_4.raw High VINEPTAAALAYGLDK IPI:IPI00007765.5 1 1 CID 107.43 5.28 1.00 1 2 823.44019 1645.87309 -3.98 36.75 4342 4342 MS2 23/30 Linfeng_091611_rIgG_4.raw High EQQIVIQSSGGLSK 2 0 CID 75.91 5.21 1.00 1 2 737.39404 1473.78081 -6.79 27.24 3031 3031 MS2 22/26 Linfeng_091811_SIN3A_4.raw High VINEPTAAALAYGLDK IPI:IPI00007765.5 1 1 CID 109.35 5.17 1.00 1 2 823.44397 1645.88066 0.62 37.90 9160 9160 MS2 18/30 Linfeng_081211_IgG_3.raw High VINEPTAAALAYGLDK IPI:IPI00007765.5 1 1 CID 104.33 5.16 1.00 1 2 823.44305 1645.87883 -0.49 36.87 8248 8248 MS2 20/30 Linfeng_081211_IgG_4.raw High SQVFSTAADGQTQVEIK IPI:IPI00007765.5 2 1 CID 83.87 5.10 1.00 1 2 904.95496 1808.90264 0.04 30.18 6110 6110 MS2 20/32 Linfeng_081211_IgG_4.raw High EQQIVIQSSGGLSK IPI:IPI00007765.5 2 1 CID 61.56 5.10 1.00 1 2 737.39471 1473.78215 -5.88 26.95 3047 3047 MS2 23/26 Linfeng_091611_rIgG_4.raw High STNGDTFLGGEDFDQALLR IPI:IPI00007765.5 2 1 CID 81.70 4.94 1.00 1 2 1028.48547 2055.96367 0.87 42.10 9855 9855 MS2 18/36 Linfeng_081211_IgG_4.raw High MKETAENYLGHTAK IPI:IPI00007765.5 2 1 CID 40.74 4.91 1.00 1 3 531.59412 1592.76780 -3.76 20.92 2209 2209 MS2 25/52 Linfeng_091611_rIgG_4.raw High SDIGEVILVGGMTR 2 0 CID 76.73 4.85 1.00 1 2 723.88330 1446.75932 -1.97 39.87 4683 4683 MS2 20/26 Linfeng_091811_SIN3A_4.raw High SDIGEVILVGGMTR IPI:IPI00007765.5 2 1 CID 77.05 4.85 1.00 1 2 723.88306 1446.75884 -2.31 39.52 4703 4703 MS2 21/26 Linfeng_091611_rIgG_4.raw High DAGQISGLNVLR 2 0 CID 62.35 4.85 1.00 1 3 414.89670 1242.67554 -3.70 35.31 4096 4096 MS2 29/44 Linfeng_091811_SIN3A_4.raw High NAVITVPAYFNDSQR IPI:IPI00007765.5 2 1 CID 86.78 4.79 1.00 1 3 565.61938 1694.84360 -3.61 36.27 4280 4280 MS2 30/56 Linfeng_091611_rIgG_4.raw High LYSPSQIGAFVLmK IPI:IPI00007765.5 1 1 CID M13(Oxidation) 54.93 4.75 1.00 1 3 523.95050 1569.83695 1.50 41.52 9701 9701 MS2 25/52 Linfeng_081211_IgG_4.raw High SDIGEVILVGGmTR IPI:IPI00007765.5 2 1 CID M12(Oxidation) 67.11 4.74 1.00 1 2 731.87939 1462.75151 -3.82 35.77 4215 4215 MS2 18/26 Linfeng_091611_rIgG_4.raw High EQQIVIQSSGGLSK IPI:IPI00007765.5 2 1 CID 64.97 4.62 1.00 1 2 737.39606 1473.78484 -4.05 27.05 3029 3029 MS2 21/26 Linfeng_091611_rIgG_5.raw High AQFEGIVTDLIR 2 0 CID 70.36 4.58 1.00 1 2 681.37366 1361.74004 -1.74 42.72 5053 5053 MS2 19/22 Linfeng_091811_SIN3A_4.raw High SDIGEVILVGGmTR 2 0 CID M12(Oxidation) 68.82 4.58 1.00 1 2 731.88062 1462.75395 -2.15 36.12 4203 4203 MS2 19/26 Linfeng_091811_SIN3A_4.raw High mKETAENYLGHTAK 2 0 CID M1(Oxidation) 30.48 4.57 1.00 1 3 536.92590 1608.76316 -3.44 19.75 1978 1978 MS2 26/52 Linfeng_091811_SIN3A_4.raw High AQFEGIVTDLIR IPI:IPI00007765.5 2 1 CID 48.18 4.57 1.00 1 3 454.58426 1361.73822 -3.08 42.46 5085 5085 MS2 26/44 Linfeng_091611_rIgG_4.raw High AQFEGIVTDLIR IPI:IPI00007765.5 2 1 CID 67.39 4.52 1.00 1 2 681.37274 1361.73821 -3.09 42.42 5080 5080 MS2 19/22 Linfeng_091611_rIgG_4.raw High GAVVGIDLGTTNScVAVmEGK IPI:IPI00007765.5 1 1 CID "C14(Carbamidomethyl), M18(Oxidation)" 58.29 4.50 1.00 1 2 1047.51294 2094.01860 -1.00 34.50 7537 7537 MS2 19/40 Linfeng_081211_IgG_4.raw High AQFEGIVTDLIR 2 0 CID 76.96 4.46 1.00 1 2 681.37347 1361.73967 -2.01 42.66 5025 5025 MS2 19/22 Linfeng_091811_SIN3A_3.raw High DAGQISGLNVLR 2 0 CID 56.57 4.39 1.00 1 2 621.84131 1242.67534 -3.86 35.16 4077 4077 MS2 19/22 Linfeng_091811_SIN3A_4.raw High DAGQISGLNVLR IPI:IPI00007765.5 2 1 CID 57.74 4.39 1.00 1 2 621.84143 1242.67558 -3.67 34.84 4092 4092 MS2 20/22 Linfeng_091611_rIgG_4.raw High LYSPSQIGAFVLmK 1 0 CID M13(Oxidation) 53.93 4.37 1.00 1 2 785.41870 1569.83013 -2.85 41.97 4956 4956 MS2 19/26 Linfeng_091811_SIN3A_4.raw High AQFEGIVTDLIR 2 0 CID 54.63 4.35 1.00 1 3 454.58475 1361.73969 -2.00 42.73 5055 5055 MS2 28/44 Linfeng_091811_SIN3A_4.raw High LYSPSQIGAFVLmK IPI:IPI00007765.5 1 1 CID M13(Oxidation) 59.34 4.26 1.00 1 2 785.41791 1569.82854 -3.86 41.66 4983 4983 MS2 19/26 Linfeng_091611_rIgG_4.raw High QAVTNPNNTFYATK IPI:IPI00007765.5 3 1 CID 109.09 4.20 1.00 1 2 784.88678 1568.76628 -2.62 25.41 2839 2839 MS2 17/26 Linfeng_091611_rIgG_4.raw High TTPSVVAFTADGER IPI:IPI00007765.5 3 1 CID 80.58 4.19 1.00 1 2 725.86005 1450.71282 -3.11 31.08 3603 3603 MS2 20/26 Linfeng_091611_rIgG_4.raw High STNGDTFLGGEDFDQALLR IPI:IPI00007765.5 2 1 CID 40.35 4.19 1.00 1 3 685.99286 2055.96402 1.04 42.13 9865 9865 MS2 31/72 Linfeng_081211_IgG_4.raw High DAGQISGLNVLR IPI:IPI00007765.5 2 1 CID 64.64 4.19 1.00 1 2 621.84277 1242.67827 -1.51 35.21 7773 7773 MS2 17/22 Linfeng_081211_IgG_4.raw High AQFEGIVTDLIR IPI:IPI00007765.5 2 1 CID 88.43 4.18 1.00 1 2 681.37476 1361.74224 -0.13 42.49 9877 9877 MS2 19/22 Linfeng_081211_IgG_5.raw High LLGQFTLIGIPPAPR IPI:IPI00007765.5 2 1 CID 98.53 4.08 1.00 1 2 796.97760 1592.94792 -2.79 44.17 5302 5302 MS2 19/28 Linfeng_091611_rIgG_4.raw High SDIGEVILVGGmTR IPI:IPI00007765.5 2 1 CID M12(Oxidation) 61.14 4.04 1.00 1 2 731.88385 1462.76042 2.27 36.84 8788 8788 MS2 16/26 Linfeng_081211_IgG_3.raw High VQQTVQDLFGR IPI:IPI00007765.5 2 1 CID 27.32 3.92 1.00 1 2 645.84192 1290.67656 -2.77 34.49 7658 7658 MS2 16/20 Linfeng_081211_IgG_6.raw High DAGQISGLNVLR IPI:IPI00007765.5 2 1 CID 27.97 3.78 1.00 1 2 621.84393 1242.68059 0.36 36.01 8510 8510 MS2 17/22 Linfeng_081211_IgG_3.raw High SDIGEVILVGGmTR IPI:IPI00007765.5 2 1 CID M12(Oxidation) 32.64 3.73 1.00 1 2 731.88196 1462.75664 -0.31 36.06 7998 7998 MS2 14/26 Linfeng_081211_IgG_4.raw High TTPSVVAFTADGER IPI:IPI00007765.5 3 1 CID 72.32 3.71 1.00 1 2 725.86206 1450.71684 -0.33 31.69 6631 6631 MS2 16/26 Linfeng_081211_IgG_4.raw High LYSPSQIGAFVLmK IPI:IPI00007765.5 1 1 CID M13(Oxidation) 35.20 3.70 1.00 1 2 785.42181 1569.83635 1.12 41.61 9728 9728 MS2 16/26 Linfeng_081211_IgG_4.raw High EQQIVIQSSGGLSK IPI:IPI00007765.5 2 1 CID 65.24 3.70 1.00 1 2 737.39764 1473.78801 -1.90 27.52 5239 5239 MS2 16/26 Linfeng_081211_IgG_4.raw High NAVITVPAYFNDSQR IPI:IPI00007765.5 2 1 CID 40.61 3.49 1.00 1 2 847.92816 1694.84905 -0.40 37.47 9002 9002 MS2 18/28 Linfeng_081211_IgG_3.raw High VQQTVQDLFGR IPI:IPI00007765.5 2 1 CID 35.09 3.48 1.00 1 2 645.84332 1290.67937 -0.59 35.19 8213 8213 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00012074.3 633 70.9 8.13 Isoform 1 of Heterogeneous nuclear ribonucleoprotein R 27.33 32 13 272.37 23.54 20 12 149.85 14.38 6 5 168.54 12.32 6 4 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EFNEEGALSVLQQFK 4 0 CID 34.75 6.07 1.00 1 3 580.29230 1738.86234 -1.37 44.96 5315 5315 MS2 25/56 Linfeng_091811_SIN3A_3.raw High EFNEEGALSVLQQFK 4 0 CID 84.89 5.75 1.00 1 2 869.93469 1738.86211 -1.50 44.96 5316 5316 MS2 20/28 Linfeng_091811_SIN3A_3.raw High VWGNVVTVEWADPVEEPDPEVmAK IPI:IPI00012074.3 6 1 CID M22(Oxidation) 46.05 5.66 1.00 1 3 904.76489 2712.28012 -2.28 42.85 5135 5135 MS2 27/92 Linfeng_091611_rIgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK IPI:IPI00012074.3 5 1 CID 111.18 5.46 1.00 1 3 879.11548 2635.33188 -3.22 35.24 4144 4144 MS2 36/100 Linfeng_091611_rIgG_4.raw High VWGNVVTVEWADPVEEPDPEVmAK 6 0 CID M22(Oxidation) 55.79 5.37 1.00 1 3 904.76587 2712.28305 -1.20 43.00 5069 5069 MS2 23/92 Linfeng_091811_SIN3A_3.raw High EFNEEGALSVLQQFK IPI:IPI00012074.3 4 1 CID 52.57 5.30 1.00 1 3 580.29138 1738.85959 -2.95 44.74 4748 4748 MS2 25/56 Linfeng_091611_rIgG_3.raw High YGGPPPDSVYSGVQPGIGTEVFVGK IPI:IPI00012074.3 5 1 CID 74.39 5.11 1.00 1 3 836.41925 2507.24320 -0.87 38.53 8798 8798 MS2 28/96 Linfeng_081211_IgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK 5 0 CID 72.60 5.10 1.00 1 3 879.11365 2635.32639 -5.30 35.67 4143 4143 MS2 37/100 Linfeng_091811_SIN3A_4.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 65.51 4.58 1.00 1 2 730.89386 1460.78044 -2.66 43.14 5172 5172 MS2 21/24 Linfeng_091611_rIgG_4.raw High DLYEDELVPLFEK IPI:IPI00012074.3 6 1 CID 64.03 4.48 1.00 1 2 805.40515 1609.80303 2.10 46.97 12122 12122 MS2 18/24 Linfeng_081211_IgG_3.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK IPI:IPI00012074.3 5 1 CID 44.08 4.41 1.00 1 3 879.11810 2635.33976 -0.23 35.46 7846 7846 MS2 28/100 Linfeng_081211_IgG_4.raw High NLATTVTEEILEK 6 0 CID 61.96 4.40 1.00 1 2 730.89435 1460.78142 -1.99 43.47 5151 5151 MS2 20/24 Linfeng_091811_SIN3A_4.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 65.18 4.39 1.00 1 2 730.89532 1460.78337 -0.66 43.06 10023 10023 MS2 20/24 Linfeng_081211_IgG_5.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 43.73 4.33 1.00 1 2 730.89630 1460.78533 0.68 43.19 10120 10120 MS2 17/24 Linfeng_081211_IgG_4.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 62.46 4.29 1.00 1 2 730.89380 1460.78032 -2.75 43.27 5140 5140 MS2 18/24 Linfeng_091611_rIgG_5.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 30.05 4.23 1.00 1 3 487.60037 1460.78656 1.53 43.26 10132 10132 MS2 25/48 Linfeng_081211_IgG_4.raw High NLATTVTEEILEK 6 0 CID 66.35 4.14 1.00 1 2 730.89465 1460.78203 -1.58 43.39 5119 5119 MS2 21/24 Linfeng_091811_SIN3A_3.raw High VTEGLVDVILYHQPDDK IPI:IPI00012074.3 3 1 CID 54.61 4.13 1.00 1 2 971.00262 1940.99797 0.78 40.18 9315 9315 MS2 15/32 Linfeng_081211_IgG_4.raw High DLYEDELVPLFEK IPI:IPI00012074.3 6 1 CID 69.54 4.09 1.00 1 2 805.40204 1609.79680 -1.77 46.34 5573 5573 MS2 20/24 Linfeng_091611_rIgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 51.85 3.97 1.00 1 2 656.32990 1311.65251 -1.10 28.84 5663 5663 MS2 17/22 Linfeng_081211_IgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK IPI:IPI00012074.3 5 1 CID 73.68 3.84 1.00 1 2 1254.12390 2507.24053 -1.94 38.52 8796 8796 MS2 14/48 Linfeng_081211_IgG_4.raw High EFNEEGALSVLQQFK IPI:IPI00012074.3 4 1 CID 19.96 3.81 1.00 1 2 869.93750 1738.86772 1.73 44.55 10399 10399 MS2 14/28 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 64.18 3.79 1.00 1 2 656.32916 1311.65105 -2.22 29.80 6194 6194 MS2 17/22 Linfeng_081211_IgG_3.raw High LmmDPLSGQNR IPI:IPI00012074.3 6 1 CID "M2(Oxidation), M3(Oxidation)" 53.89 3.77 1.00 1 2 647.29932 1293.59136 -1.01 24.97 4633 4633 MS2 17/20 Linfeng_081211_IgG_3.raw High GFcFLEYEDHK IPI:IPI00012074.3;IPI:IPI00402182.2 13 2 CID C3(Carbamidomethyl) 59.25 3.72 1.00 1 2 722.81451 1444.62175 1.06 35.50 7856 7856 MS2 16/20 Linfeng_081211_IgG_4.raw High TKENILEEFSK IPI:IPI00012074.3 6 1 CID 37.73 3.71 1.00 1 2 669.34967 1337.69206 -2.03 33.14 7113 7113 MS2 16/20 Linfeng_081211_IgG_4.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 45.25 3.65 1.00 1 2 656.32983 1311.65239 -1.20 28.60 5759 5759 MS2 16/22 Linfeng_081211_IgG_8.raw High NLATTVTEEILEK IPI:IPI00012074.3 6 1 CID 21.81 3.65 1.00 1 2 730.89789 1460.78850 2.85 43.08 10403 10403 MS2 14/24 Linfeng_081211_IgG_10.raw High TGYTLDVTTGQR IPI:IPI00012074.3;IPI:IPI00402182.2 12 2 CID 30.55 3.57 1.00 1 2 656.33002 1311.65276 -0.92 28.78 5703 5703 MS2 14/22 Linfeng_081211_IgG_6.raw High GYAFITFcGK IPI:IPI00012074.3 6 1 CID C8(Carbamidomethyl) 59.81 3.55 1.00 1 2 582.28119 1163.55510 -0.29 37.49 8466 8466 MS2 15/18 Linfeng_081211_IgG_4.raw High DLYEDELVPLFEK IPI:IPI00012074.3 6 1 CID 46.70 3.54 1.00 1 2 805.40411 1609.80095 0.81 46.30 11207 11207 MS2 16/24 Linfeng_081211_IgG_8.raw High DYAFVHFEDR IPI:IPI00012074.3 6 1 CID 72.68 3.50 1.00 1 2 649.79346 1298.57964 -0.33 34.92 7666 7666 MS2 15/18 Linfeng_081211_IgG_4.raw IPI:IPI00477971.4 808 89.0 6.90 Transducin beta-like protein 3 31.56 35 16 123.01 19.55 20 11 55.98 11.26 4 4 87.71 21.66 11 11 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SLEQEDQEDITAFDLSPDNEVLVTASR IPI:IPI00477971.4 2 1 CID 111.03 7.20 1.00 1 3 1007.80865 3021.41141 -1.93 42.78 5041 5041 MS2 38/104 Linfeng_091811_SIN3A_3.raw High AIHTAPVATmAFDPTSTLLATGGcDGAVR IPI:IPI00643087.1 2 1 CID "M10(Oxidation), C24(Carbamidomethyl)" 64.46 7.02 1.00 1 3 973.14221 2917.41208 -2.17 36.94 3754 3754 MS2 28/112 Linfeng_091611_rIgG_3.raw High SLEQEDQEDITAFDLSPDNEVLVTASR IPI:IPI00643087.1 2 1 CID 99.99 6.91 1.00 1 3 1007.80847 3021.41086 -2.11 42.57 4473 4473 MS2 32/104 Linfeng_091611_rIgG_3.raw High FLGPEDSHVVVASNSPcLK IPI:IPI00477971.4 3 1 CID C17(Carbamidomethyl) 73.62 5.81 1.00 1 3 686.00806 2056.00962 -3.54 31.12 3527 3527 MS2 29/72 Linfeng_091811_SIN3A_3.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 100.29 5.79 1.00 1 2 848.43604 1695.86479 -3.15 40.45 4742 4742 MS2 22/30 Linfeng_091811_SIN3A_3.raw High NTAPDNGPILLQAQTTQR IPI:IPI00477971.4 3 1 CID 73.36 5.26 1.00 1 3 646.67114 1937.99887 -2.65 31.23 3542 3542 MS2 29/68 Linfeng_091811_SIN3A_3.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 102.28 5.26 1.00 1 2 848.43768 1695.86809 -1.20 41.81 10472 10472 MS2 22/30 Linfeng_081211_IgG_3.raw High ALLLAQWAWQEGSVTR IPI:IPI00477971.4 2 1 CID 61.30 5.25 1.00 1 3 610.32709 1828.96671 -2.09 45.69 5408 5408 MS2 26/60 Linfeng_091811_SIN3A_3.raw High NTAPDNGPILLQAQTTQR IPI:IPI00477971.4 3 1 CID 67.52 5.17 1.00 1 3 646.67194 1938.00125 -1.42 32.29 7114 7114 MS2 25/68 Linfeng_081211_IgG_3.raw High DVTEAEQAEEQAR IPI:IPI00477971.4 3 1 CID 81.42 5.10 1.00 1 2 738.33234 1475.65740 -2.40 23.59 2490 2490 MS2 20/24 Linfeng_091811_SIN3A_3.raw High VNILEVASGAVLR IPI:IPI00477971.4 2 1 CID 63.57 5.08 1.00 1 2 670.89978 1340.79228 1.93 45.72 11756 11756 MS2 19/24 Linfeng_081211_IgG_3.raw High VNILEVASGAVLR IPI:IPI00477971.4 2 1 CID 20.70 4.97 1.00 1 3 447.60068 1340.78748 -1.66 44.26 5227 5227 MS2 28/48 Linfeng_091811_SIN3A_3.raw High FLGPEDSHVVVASNSPcLK IPI:IPI00477971.4 3 1 CID C17(Carbamidomethyl) 42.30 4.91 1.00 1 3 686.00995 2056.01529 -0.78 34.20 7835 7835 MS2 23/72 Linfeng_081211_IgG_3.raw High DVTEAEQAEEQAR IPI:IPI00477971.4 3 1 CID 82.53 4.88 1.00 1 2 738.33307 1475.65886 -1.40 24.61 4512 4512 MS2 20/24 Linfeng_081211_IgG_3.raw High ALLLAQWAWQEGSVTR IPI:IPI00643087.1 2 1 CID 52.63 4.84 1.00 1 3 610.32611 1828.96378 -3.69 45.44 4836 4836 MS2 26/60 Linfeng_091611_rIgG_3.raw High NTAPDNGPILLQAQTTQR IPI:IPI00477971.4 3 1 CID 77.65 4.81 1.00 1 2 969.50464 1938.00200 -1.04 32.27 7106 7106 MS2 18/34 Linfeng_081211_IgG_3.raw High FLGPEDSHVVVASNSPcLK IPI:IPI00643087.1 3 1 CID C17(Carbamidomethyl) 42.09 4.57 1.00 1 3 686.00793 2056.00925 -3.72 30.99 3005 3005 MS2 26/72 Linfeng_091611_rIgG_3.raw High VNILEVASGAVLR IPI:IPI00477971.4 2 1 CID 48.41 4.56 1.00 1 2 670.89960 1340.79192 1.65 44.05 10700 10700 MS2 17/24 Linfeng_081211_IgG_10.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 19.67 4.49 1.00 1 3 565.96118 1695.86899 -0.67 41.82 10476 10476 MS2 24/60 Linfeng_081211_IgG_3.raw High LLLFSSATDAAIR IPI:IPI00477971.4 3 1 CID 41.64 4.42 1.00 1 2 689.39001 1377.77275 -0.70 41.71 10441 10441 MS2 18/24 Linfeng_081211_IgG_3.raw High ESFLVTGSQDcTVK IPI:IPI00477971.4 3 1 CID C11(Carbamidomethyl) 69.92 4.28 1.00 1 2 785.87280 1570.73833 -2.22 30.31 3420 3420 MS2 20/26 Linfeng_091811_SIN3A_3.raw High HcHEAQAVLGVLLR IPI:IPI00477971.4 2 1 CID C2(Carbamidomethyl) 41.56 4.27 1.00 1 3 534.95471 1602.84958 -2.37 34.59 3981 3981 MS2 28/52 Linfeng_091811_SIN3A_3.raw High EAPEELLAYEGVR IPI:IPI00477971.4 2 1 CID 60.32 4.26 1.00 1 2 738.37354 1475.73979 1.40 37.11 8882 8882 MS2 16/24 Linfeng_081211_IgG_3.raw High VNILEVASGAVLR IPI:IPI00477971.4 2 1 CID 33.68 4.23 1.00 1 3 447.60220 1340.79206 1.76 45.70 11750 11750 MS2 24/48 Linfeng_081211_IgG_3.raw High DVTEAEQAEEQAR IPI:IPI00477971.4 3 1 CID 47.28 4.15 1.00 1 3 492.55783 1475.65894 -1.35 24.66 4531 4531 MS2 25/48 Linfeng_081211_IgG_3.raw High LWALQDFScLK IPI:IPI00477971.4 3 1 CID C9(Carbamidomethyl) 47.19 4.15 1.00 1 2 690.85046 1380.69365 -3.22 43.87 5179 5179 MS2 15/20 Linfeng_091811_SIN3A_3.raw High GTQLLSSGSDGLVK IPI:IPI00477971.4 3 1 CID 78.62 4.10 1.00 1 2 681.36566 1361.72405 -2.28 30.34 3423 3423 MS2 20/26 Linfeng_091811_SIN3A_3.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 60.31 4.00 1.00 1 2 848.43970 1695.87212 1.17 40.69 9465 9465 MS2 17/30 Linfeng_081211_IgG_4.raw High ESFLVTGSQDcTVK IPI:IPI00477971.4 3 1 CID C11(Carbamidomethyl) 43.15 3.87 1.00 1 2 785.87421 1570.74114 -0.43 31.69 6892 6892 MS2 17/26 Linfeng_081211_IgG_3.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 47.63 3.82 1.00 1 2 848.44012 1695.87297 1.68 40.65 9451 9451 MS2 13/30 Linfeng_081211_IgG_4.raw High GTQLLSSGSDGLVK IPI:IPI00477971.4 3 1 CID 28.82 3.81 1.00 1 2 681.36670 1361.72612 -0.76 31.65 6877 6877 MS2 16/26 Linfeng_081211_IgG_3.raw High DINSVAIAPNDK IPI:IPI00477971.4 3 1 CID 18.27 3.80 1.00 1 2 628.82587 1256.64446 -2.96 28.43 5722 5722 MS2 13/22 Linfeng_081211_IgG_3.raw High QFAGYSEEVLDVR IPI:IPI00477971.4 3 1 CID 46.77 3.79 1.00 1 2 756.86951 1512.73174 -0.81 36.40 8625 8625 MS2 18/24 Linfeng_081211_IgG_3.raw High SPGLYFLTAGDQGTLR IPI:IPI00477971.4 3 1 CID 46.36 3.75 1.00 1 2 848.43939 1695.87151 0.81 40.68 9461 9461 MS2 15/30 Linfeng_081211_IgG_4.raw High LLLFSSATDAAIR IPI:IPI00477971.4 3 1 CID 42.32 3.46 1.00 1 2 689.39142 1377.77556 1.34 40.20 9324 9324 MS2 16/24 Linfeng_081211_IgG_4.raw IPI:IPI00217465.5 213 21.4 10.93 Histone H1.2 21.13 31 6 283.49 15.96 22 5 138.78 11.74 4 2 140.55 16.90 5 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 69.45 5.21 1.00 1 3 442.92191 1326.75116 -8.78 26.75 2727 2727 MS2 29/48 Linfeng_091811_SIN3A_7.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 64.20 4.99 1.00 1 2 618.33276 1235.65825 -3.92 21.74 2033 2033 MS2 20/22 Linfeng_091811_SIN3A_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 79.49 4.99 1.00 1 2 663.88068 1326.75408 -6.58 26.65 2713 2713 MS2 19/24 Linfeng_091811_SIN3A_7.raw High KALAAAGYDVEK 5 0 CID 67.43 4.96 1.00 1 2 618.33380 1235.66033 -2.24 21.58 2190 2190 MS2 19/22 Linfeng_091611_rIgG_7.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 70.30 4.95 1.00 1 2 618.33453 1235.66179 -1.05 22.81 3786 3786 MS2 20/22 Linfeng_081211_IgG_7.raw High KASGPPVSELITK 3 0 CID 84.39 4.82 1.00 1 2 663.88245 1326.75762 -3.92 26.28 2839 2839 MS2 19/24 Linfeng_091611_rIgG_7.raw High KASGPPVSELITK 3 0 CID 51.13 4.77 1.00 1 2 663.88202 1326.75676 -4.56 26.57 2805 2805 MS2 17/24 Linfeng_091611_rIgG_1.raw High KASGPPVSELITK 3 0 CID 50.99 4.65 1.00 1 3 442.92270 1326.75354 -6.99 26.25 2834 2834 MS2 26/48 Linfeng_091611_rIgG_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 89.41 4.55 1.00 1 2 663.88367 1326.76006 -2.08 27.76 5137 5137 MS2 19/24 Linfeng_081211_IgG_5.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 19.03 4.52 1.00 1 3 369.85986 1107.56504 -2.79 26.05 4836 4836 MS2 26/40 Linfeng_081211_IgG_7.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 20.31 4.50 1.00 1 3 412.55756 1235.65812 -4.03 21.66 2022 2022 MS2 25/44 Linfeng_091811_SIN3A_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 49.88 4.33 1.00 1 2 663.88446 1326.76164 -0.88 31.64 6626 6626 MS2 15/24 Linfeng_081211_IgG_7.raw High AKKPAAATVTK IPI:IPI00217465.5 1 1 CID 35.36 4.33 1.00 1 3 362.56039 1085.66663 -1.06 1.47 123 123 MS2 21/40 Linfeng_091811_SIN3A_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 53.31 4.29 1.00 1 3 442.92407 1326.75766 -3.88 27.34 5168 5168 MS2 24/48 Linfeng_081211_IgG_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 67.82 4.27 1.00 1 2 663.88403 1326.76079 -1.52 27.12 5317 5317 MS2 15/24 Linfeng_081211_IgG_8.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 55.92 4.23 1.00 1 2 618.33447 1235.66167 -1.15 24.54 4333 4333 MS2 17/22 Linfeng_081211_IgG_7.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 13.48 4.22 1.00 1 3 412.55872 1235.66159 -1.21 22.77 3771 3771 MS2 24/44 Linfeng_081211_IgG_7.raw High KALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 15.63 4.16 1.00 1 3 412.55823 1235.66013 -2.40 22.42 3849 3849 MS2 24/44 Linfeng_081211_IgG_6.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 63.98 4.00 1.00 1 2 554.28693 1107.56658 -1.40 25.17 4543 4543 MS2 16/20 Linfeng_081211_IgG_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 52.95 3.99 1.00 1 2 663.88354 1326.75981 -2.26 28.48 5599 5599 MS2 15/24 Linfeng_081211_IgG_6.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 43.95 3.97 1.00 1 2 663.88416 1326.76103 -1.34 27.26 5149 5149 MS2 18/24 Linfeng_081211_IgG_7.raw High KASGPPVSELITK IPI:IPI00217465.5 3 1 CID 37.86 3.87 1.00 1 2 663.88452 1326.76177 -0.79 29.53 6096 6096 MS2 13/24 Linfeng_081211_IgG_3.raw High SGVSLAALKK IPI:IPI00217465.5 3 1 CID 40.15 3.77 1.00 1 2 487.30569 973.60411 0.00 25.36 4699 4699 MS2 15/18 Linfeng_081211_IgG_6.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 66.96 3.58 1.00 1 2 554.28662 1107.56597 -1.95 30.62 4242 4242 MS2 17/20 Linfeng_081211_IgG_1.raw High SGVSLAALKK IPI:IPI00217465.5 3 1 CID 25.68 3.58 1.00 1 2 487.30515 973.60301 -1.13 25.26 4788 4788 MS2 15/18 Linfeng_081211_IgG_8.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 58.26 3.54 1.00 1 2 554.28680 1107.56633 -1.62 26.08 4633 4633 MS2 17/20 Linfeng_081211_IgG_5.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 69.57 3.54 1.00 1 2 554.28668 1107.56609 -1.84 26.18 4874 4874 MS2 17/20 Linfeng_081211_IgG_7.raw High ASGPPVSELITK IPI:IPI00217465.5 3 1 CID 75.02 3.51 1.00 1 2 599.83752 1198.66777 -0.06 30.98 6394 6394 MS2 16/22 Linfeng_081211_IgG_7.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 63.70 3.51 1.00 1 2 554.28662 1107.56597 -1.95 27.08 4936 4936 MS2 17/20 Linfeng_081211_IgG_2.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 38.59 3.48 1.00 1 2 554.28625 1107.56523 -2.61 29.61 4025 4025 MS2 14/20 Linfeng_081211_IgG_1.raw High ALAAAGYDVEK IPI:IPI00217465.5 5 1 CID 55.67 3.48 1.00 1 2 554.28687 1107.56645 -1.51 26.67 5204 5204 MS2 17/20 Linfeng_081211_IgG_3.raw IPI:IPI00789324.3 563 62.6 5.17 "cDNA FLJ60424, highly similar to Junction plakoglobin" 11.90 22 6 271.48 11.90 22 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLNDEDPVVVTK IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID 53.67 4.50 1.00 1 2 671.36682 1341.72637 0.20 30.35 6166 6166 MS2 17/22 Linfeng_081211_IgG_4.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 44.22 4.22 1.00 1 2 714.40619 1427.80510 0.78 34.95 7822 7822 MS2 16/26 Linfeng_081211_IgG_7.raw High LLNDEDPVVVTK IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID 68.15 4.14 1.00 1 2 671.36627 1341.72527 -0.61 30.30 6209 6209 MS2 17/22 Linfeng_081211_IgG_6.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 50.83 3.95 1.00 1 2 561.79205 1122.57683 -1.93 26.79 5244 5244 MS2 15/16 Linfeng_081211_IgG_3.raw High TmQNTSDLDTAR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M2(Oxidation) 51.77 3.85 1.00 1 2 684.80530 1368.60332 -1.99 18.97 2790 2790 MS2 14/22 Linfeng_081211_IgG_6.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 44.46 3.76 1.00 1 2 515.30029 1029.59331 -0.61 34.85 7148 7148 MS2 15/16 Linfeng_081211_IgG_2.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 20.38 3.73 1.00 1 2 714.40503 1427.80278 -0.84 43.73 7279 7279 MS2 15/26 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.79 3.72 1.00 1 2 515.30084 1029.59441 0.45 34.50 7954 7954 MS2 15/16 Linfeng_081211_IgG_3.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 44.18 3.70 1.00 1 2 610.79968 1220.59209 -1.60 29.94 6242 6242 MS2 17/20 Linfeng_081211_IgG_8.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 52.98 3.70 1.00 1 2 714.40637 1427.80547 1.04 34.81 7631 7631 MS2 18/26 Linfeng_081211_IgG_4.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 50.26 3.70 1.00 1 2 714.40497 1427.80266 -0.93 34.91 7809 7809 MS2 16/26 Linfeng_081211_IgG_6.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.65 3.66 1.00 1 2 515.30029 1029.59331 -0.61 33.71 7363 7363 MS2 15/16 Linfeng_081211_IgG_7.raw High ALmGSPQLVAAVVR IPI:IPI00554711.3;IPI:IPI00789324.3 5 2 CID M3(Oxidation) 39.79 3.66 1.00 1 2 714.40607 1427.80486 0.61 35.61 8373 8373 MS2 17/26 Linfeng_081211_IgG_3.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 43.56 3.61 1.00 1 2 515.30023 1029.59319 -0.73 42.53 6934 6934 MS2 15/16 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 52.13 3.60 1.00 1 2 561.79163 1122.57598 -2.70 31.59 4423 4423 MS2 15/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 37.34 3.57 1.00 1 2 515.29987 1029.59245 -1.44 33.17 7385 7385 MS2 15/16 Linfeng_081211_IgG_8.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 42.21 3.55 1.00 1 2 515.30115 1029.59502 1.05 36.35 6128 6128 MS2 15/16 Linfeng_081211_IgG_9.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 56.04 3.53 1.00 1 2 561.79254 1122.57781 -1.06 25.49 4862 4862 MS2 15/16 Linfeng_081211_IgG_8.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 39.51 3.48 1.00 1 2 610.79926 1220.59123 -2.30 30.46 6204 6204 MS2 14/20 Linfeng_081211_IgG_7.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 38.64 3.48 1.00 1 2 561.79089 1122.57451 -4.00 25.80 4846 4846 MS2 15/16 Linfeng_081211_IgG_10.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 47.59 3.47 1.00 1 2 515.29950 1029.59172 -2.16 33.58 7207 7207 MS2 15/16 Linfeng_081211_IgG_5.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 13.93 3.46 1.00 1 2 610.80023 1220.59319 -0.70 38.66 5833 5833 MS2 17/20 Linfeng_081211_IgG_1.raw IPI:IPI00477313.3 306 33.6 5.08 Isoform C2 of Heterogeneous nuclear ribonucleoproteins C1/C2 38.56 51 9 332.88 28.43 24 7 232.67 12.75 11 3 234.55 30.72 16 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 78.74 6.29 1.00 1 3 561.64215 1682.91190 -1.65 40.34 9508 9508 MS2 34/60 Linfeng_081211_IgG_6.raw High MIAGQVLDINLAAEPK 7 0 CID 92.96 6.25 1.00 1 3 561.64227 1682.91227 -1.43 39.41 4554 4554 MS2 36/60 Linfeng_091611_rIgG_7.raw High MIAGQVLDINLAAEPK 7 0 CID 88.35 6.23 1.00 1 3 561.64099 1682.90842 -3.71 39.47 4641 4641 MS2 35/60 Linfeng_091611_rIgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 86.65 6.16 1.00 1 3 561.64136 1682.90952 -3.06 39.69 4647 4647 MS2 34/60 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 90.65 6.10 1.00 1 2 849.95276 1698.89824 -6.68 37.59 4377 4377 MS2 24/30 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 64.22 6.08 1.00 1 3 566.97150 1698.89994 -5.68 37.37 4292 4292 MS2 36/60 Linfeng_091611_rIgG_7.raw High MIAGQVLDINLAAEPK 7 0 CID 87.98 6.03 1.00 1 2 841.95734 1682.90740 -4.32 39.47 4640 4640 MS2 26/30 Linfeng_091611_rIgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 41.31 5.95 1.00 1 3 566.97168 1698.90049 -5.36 37.79 4249 4249 MS2 26/60 Linfeng_091811_SIN3A_8.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 66.75 5.94 1.00 1 2 849.95551 1698.90373 -3.44 37.47 4305 4305 MS2 24/30 Linfeng_091611_rIgG_7.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 48.63 5.84 1.00 1 3 566.97223 1698.90213 -4.39 37.47 4379 4379 MS2 35/60 Linfeng_091611_rIgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 75.96 5.79 1.00 1 2 849.95300 1698.89873 -6.39 37.70 4172 4172 MS2 24/30 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 71.33 5.77 1.00 1 2 849.95416 1698.90105 -5.03 37.46 4378 4378 MS2 24/30 Linfeng_091611_rIgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 72.41 5.76 1.00 1 3 561.64148 1682.90989 -2.84 39.87 4451 4451 MS2 36/60 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 48.23 5.57 1.00 1 3 566.97168 1698.90049 -5.36 37.59 4376 4376 MS2 33/60 Linfeng_091811_SIN3A_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 94.60 5.56 1.00 1 2 841.95837 1682.90947 -3.09 39.70 4648 4648 MS2 26/30 Linfeng_091811_SIN3A_6.raw High SAAEmYGSVTEHPSPSPLLSSSFDLDYDFQR IPI:IPI00477313.3 1 1 CID M5(Oxidation) 83.74 5.52 1.00 1 4 863.14008 3449.53847 -2.74 41.98 4941 4941 MS2 33/180 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 63.34 5.49 1.00 1 3 566.97150 1698.89994 -5.68 37.63 4163 4163 MS2 33/60 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 59.86 5.33 1.00 1 2 849.95886 1698.91045 0.51 37.67 8706 8706 MS2 17/30 Linfeng_081211_IgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 80.69 5.28 1.00 1 2 841.95947 1682.91167 -1.78 40.28 9488 9488 MS2 20/30 Linfeng_081211_IgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 72.12 5.14 1.00 1 2 849.95795 1698.90862 -0.57 37.24 8454 8454 MS2 22/30 Linfeng_081211_IgG_10.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 90.55 4.99 1.00 1 2 841.96289 1682.91850 2.28 39.32 9181 9181 MS2 22/30 Linfeng_081211_IgG_10.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 87.26 4.78 1.00 1 2 841.96063 1682.91399 -0.41 39.77 9399 9399 MS2 21/30 Linfeng_081211_IgG_7.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 60.14 4.53 1.00 1 2 665.33209 1329.65691 -1.32 38.89 9062 9062 MS2 17/20 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 55.76 4.49 1.00 1 2 665.32910 1329.65093 -5.82 37.53 4368 4368 MS2 17/20 Linfeng_091811_SIN3A_6.raw High GFAFVQYVNER 6 0 CID 55.87 4.47 1.00 1 2 665.32971 1329.65215 -4.90 37.33 4360 4360 MS2 17/20 Linfeng_091611_rIgG_6.raw High NDKSEEEQSSSSVKK IPI:IPI00759596.1 6 1 CID 53.30 4.47 1.00 1 3 561.26990 1681.79514 4.49 11.82 874 874 MS2 26/56 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 29.72 4.44 1.00 1 3 443.88834 1329.65046 -6.17 37.62 4381 4381 MS2 25/40 Linfeng_091811_SIN3A_6.raw High KSDVEAIFSK IPI:IPI00477313.3;IPI:IPI00759596.1 11 2 CID 44.74 4.39 1.00 1 3 375.20297 1123.59436 -4.50 28.27 3153 3153 MS2 22/36 Linfeng_091811_SIN3A_6.raw High VFIGNLNTLVVK 12 0 CID 76.55 4.35 1.00 1 2 658.89783 1316.78838 -4.05 39.08 4191 4191 MS2 19/22 Linfeng_091611_rIgG_10.raw High NDKSEEEQSSSSVK IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 109.60 4.35 1.00 1 2 777.34875 1553.69023 -1.53 2.41 232 232 MS2 20/26 Linfeng_091811_SIN3A_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 89.00 4.33 1.00 1 2 658.90070 1316.79411 0.31 39.30 9244 9244 MS2 19/22 Linfeng_081211_IgG_7.raw High GFAFVQYVNER 6 0 CID 57.75 4.31 1.00 1 2 665.32953 1329.65178 -5.17 37.32 4285 4285 MS2 17/20 Linfeng_091611_rIgG_7.raw High KSDVEAIFSK IPI:IPI00759596.1 11 1 CID 36.87 4.30 1.00 1 3 375.20367 1123.59647 -2.63 29.94 6102 6102 MS2 22/36 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00477313.3;IPI:IPI00759596.1 12 2 CID 73.10 4.29 1.00 1 2 658.89679 1316.78630 -5.63 39.34 4452 4452 MS2 20/22 Linfeng_091811_SIN3A_8.raw High VFIGNLNTLVVK 12 0 CID 75.89 4.26 1.00 1 2 658.89783 1316.78838 -4.05 38.96 4574 4574 MS2 20/22 Linfeng_091611_rIgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 89.60 4.20 1.00 1 2 658.90009 1316.79289 -0.62 38.91 9035 9035 MS2 19/22 Linfeng_081211_IgG_10.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 53.51 4.18 1.00 1 2 665.33313 1329.65898 0.24 37.52 8458 8458 MS2 17/20 Linfeng_081211_IgG_5.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 63.13 4.13 1.00 1 2 665.33264 1329.65801 -0.49 37.88 8767 8767 MS2 16/20 Linfeng_081211_IgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 41.50 4.13 1.00 1 3 566.97491 1698.91019 0.36 37.67 8707 8707 MS2 22/60 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00477313.3;IPI:IPI00759596.1 12 2 CID 77.47 4.12 1.00 1 2 658.89691 1316.78655 -5.44 39.21 4585 4585 MS2 20/22 Linfeng_091811_SIN3A_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 60.21 4.09 1.00 1 2 665.32880 1329.65032 -6.28 37.69 4170 4170 MS2 17/20 Linfeng_091811_SIN3A_7.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 57.04 4.08 1.00 1 2 665.33313 1329.65898 0.24 40.67 9609 9609 MS2 17/20 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 64.34 3.94 1.00 1 2 658.90057 1316.79387 0.12 39.30 9045 9045 MS2 17/22 Linfeng_081211_IgG_4.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.95 3.92 1.00 1 2 658.90015 1316.79302 -0.53 40.99 9710 9710 MS2 20/22 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 49.37 3.89 1.00 1 2 665.33331 1329.65935 0.52 37.30 8479 8479 MS2 17/20 Linfeng_081211_IgG_10.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.53 3.85 1.00 1 2 658.90088 1316.79448 0.58 40.00 9397 9397 MS2 15/22 Linfeng_081211_IgG_6.raw High VDSLLENLEK IPI:IPI00759596.1 9 1 CID 52.83 3.74 1.00 1 2 580.31390 1159.62053 -0.02 36.49 8315 8315 MS2 16/18 Linfeng_081211_IgG_6.raw High GDDQLELIKDDEK IPI:IPI00759596.1 5 1 CID 55.86 3.74 1.00 1 2 759.36926 1517.73125 -1.18 29.37 5900 5900 MS2 15/24 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 36.14 3.63 1.00 1 2 658.90027 1316.79326 -0.34 40.65 10068 10068 MS2 15/22 Linfeng_081211_IgG_3.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.89 3.62 1.00 1 2 658.90039 1316.79350 -0.16 39.15 9317 9317 MS2 15/22 Linfeng_081211_IgG_8.raw High VDSLLENLEK IPI:IPI00759596.1 9 1 CID 61.95 3.61 1.00 1 2 580.31305 1159.61882 -1.49 36.55 8326 8326 MS2 16/18 Linfeng_081211_IgG_7.raw IPI:IPI00759596.1 250 27.8 4.69 Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 42.00 60 9 286.42 34.80 24 7 231.40 22.80 16 4 217.92 32.40 20 6 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SAAEmYGSSFDLDYDFQR 3 0 CID M5(Oxidation) 118.79 7.32 1.00 1 3 706.62756 2117.86814 -3.60 38.43 4505 4505 MS2 37/68 Linfeng_091611_rIgG_6.raw High SAAEmYGSSFDLDYDFQR IPI:IPI00759596.1 3 1 CID M5(Oxidation) 141.76 6.51 1.00 1 3 706.62701 2117.86649 -4.38 38.59 4287 4287 MS2 39/68 Linfeng_091811_SIN3A_7.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 78.74 6.29 1.00 1 3 561.64215 1682.91190 -1.65 40.34 9508 9508 MS2 34/60 Linfeng_081211_IgG_6.raw High MIAGQVLDINLAAEPK 7 0 CID 92.96 6.25 1.00 1 3 561.64227 1682.91227 -1.43 39.41 4554 4554 MS2 36/60 Linfeng_091611_rIgG_7.raw High SAAEmYGSSFDLDYDFQR IPI:IPI00759596.1 3 1 CID M5(Oxidation) 127.24 6.23 1.00 1 3 706.62750 2117.86795 -3.68 38.60 4507 4507 MS2 37/68 Linfeng_091811_SIN3A_6.raw High MIAGQVLDINLAAEPK 7 0 CID 88.35 6.23 1.00 1 3 561.64099 1682.90842 -3.71 39.47 4641 4641 MS2 35/60 Linfeng_091611_rIgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 86.65 6.16 1.00 1 3 561.64136 1682.90952 -3.06 39.69 4647 4647 MS2 34/60 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 90.65 6.10 1.00 1 2 849.95276 1698.89824 -6.68 37.59 4377 4377 MS2 24/30 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 64.22 6.08 1.00 1 3 566.97150 1698.89994 -5.68 37.37 4292 4292 MS2 36/60 Linfeng_091611_rIgG_7.raw High MIAGQVLDINLAAEPK 7 0 CID 87.98 6.03 1.00 1 2 841.95734 1682.90740 -4.32 39.47 4640 4640 MS2 26/30 Linfeng_091611_rIgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 41.31 5.95 1.00 1 3 566.97168 1698.90049 -5.36 37.79 4249 4249 MS2 26/60 Linfeng_091811_SIN3A_8.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 66.75 5.94 1.00 1 2 849.95551 1698.90373 -3.44 37.47 4305 4305 MS2 24/30 Linfeng_091611_rIgG_7.raw High SAAEMYGSSFDLDYDFQR IPI:IPI00759596.1 3 1 CID 300.00 5.91 1.00 1 2 1051.44189 2101.87651 -2.06 40.65 4771 4771 MS2 22/34 Linfeng_091811_SIN3A_6.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 48.63 5.84 1.00 1 3 566.97223 1698.90213 -4.39 37.47 4379 4379 MS2 35/60 Linfeng_091611_rIgG_6.raw High SAAEMYGSSFDLDYDFQR 3 0 CID 136.76 5.83 1.00 1 2 1051.44153 2101.87578 -2.41 40.43 4765 4765 MS2 25/34 Linfeng_091611_rIgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 75.96 5.79 1.00 1 2 849.95300 1698.89873 -6.39 37.70 4172 4172 MS2 24/30 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK 7 0 CID M1(Oxidation) 71.33 5.77 1.00 1 2 849.95416 1698.90105 -5.03 37.46 4378 4378 MS2 24/30 Linfeng_091611_rIgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 72.41 5.76 1.00 1 3 561.64148 1682.90989 -2.84 39.87 4451 4451 MS2 36/60 Linfeng_091811_SIN3A_7.raw High SAAEmYGSSFDLDYDFQR IPI:IPI00759596.1 3 1 CID M5(Oxidation) 300.00 5.60 1.00 1 2 1059.43640 2117.86553 -4.83 38.61 4289 4289 MS2 24/34 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 48.23 5.57 1.00 1 3 566.97168 1698.90049 -5.36 37.59 4376 4376 MS2 33/60 Linfeng_091811_SIN3A_6.raw High SAAEmYGSSFDLDYDFQR IPI:IPI00759596.1 3 1 CID M5(Oxidation) 125.59 5.57 1.00 1 2 1059.43774 2117.86821 -3.56 38.62 4509 4509 MS2 24/34 Linfeng_091811_SIN3A_6.raw High MIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID 94.60 5.56 1.00 1 2 841.95837 1682.90947 -3.09 39.70 4648 4648 MS2 26/30 Linfeng_091811_SIN3A_6.raw High SAAEmYGSSFDLDYDFQR 3 0 CID M5(Oxidation) 118.07 5.56 1.00 1 2 1059.43774 2117.86821 -3.56 38.44 4506 4506 MS2 24/34 Linfeng_091611_rIgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00477313.3;IPI:IPI00759596.1 7 2 CID M1(Oxidation) 63.34 5.49 1.00 1 3 566.97150 1698.89994 -5.68 37.63 4163 4163 MS2 33/60 Linfeng_091811_SIN3A_7.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 59.86 5.33 1.00 1 2 849.95886 1698.91045 0.51 37.67 8706 8706 MS2 17/30 Linfeng_081211_IgG_6.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 80.69 5.28 1.00 1 2 841.95947 1682.91167 -1.78 40.28 9488 9488 MS2 20/30 Linfeng_081211_IgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 72.12 5.14 1.00 1 2 849.95795 1698.90862 -0.57 37.24 8454 8454 MS2 22/30 Linfeng_081211_IgG_10.raw High SAAEmYGSSFDLDYDFQR 3 0 CID M5(Oxidation) 121.77 5.01 1.00 1 2 1059.43872 2117.87016 -2.64 38.33 4415 4415 MS2 24/34 Linfeng_091611_rIgG_7.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 90.55 4.99 1.00 1 2 841.96289 1682.91850 2.28 39.32 9181 9181 MS2 22/30 Linfeng_081211_IgG_10.raw High MIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID 87.26 4.78 1.00 1 2 841.96063 1682.91399 -0.41 39.77 9399 9399 MS2 21/30 Linfeng_081211_IgG_7.raw High SAAEmYGSSFDLDYDFQR 3 0 CID M5(Oxidation) 95.31 4.55 1.00 1 3 706.62842 2117.87070 -2.39 38.41 4426 4426 MS2 36/68 Linfeng_091611_rIgG_7.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 60.14 4.53 1.00 1 2 665.33209 1329.65691 -1.32 38.89 9062 9062 MS2 17/20 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 55.76 4.49 1.00 1 2 665.32910 1329.65093 -5.82 37.53 4368 4368 MS2 17/20 Linfeng_091811_SIN3A_6.raw High GFAFVQYVNER 6 0 CID 55.87 4.47 1.00 1 2 665.32971 1329.65215 -4.90 37.33 4360 4360 MS2 17/20 Linfeng_091611_rIgG_6.raw High NDKSEEEQSSSSVKK IPI:IPI00759596.1 6 1 CID 53.30 4.47 1.00 1 3 561.26990 1681.79514 4.49 11.82 874 874 MS2 26/56 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 29.72 4.44 1.00 1 3 443.88834 1329.65046 -6.17 37.62 4381 4381 MS2 25/40 Linfeng_091811_SIN3A_6.raw High KSDVEAIFSK IPI:IPI00477313.3;IPI:IPI00759596.1 11 2 CID 44.74 4.39 1.00 1 3 375.20297 1123.59436 -4.50 28.27 3153 3153 MS2 22/36 Linfeng_091811_SIN3A_6.raw High VFIGNLNTLVVK 12 0 CID 76.55 4.35 1.00 1 2 658.89783 1316.78838 -4.05 39.08 4191 4191 MS2 19/22 Linfeng_091611_rIgG_10.raw High NDKSEEEQSSSSVK IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 109.60 4.35 1.00 1 2 777.34875 1553.69023 -1.53 2.41 232 232 MS2 20/26 Linfeng_091811_SIN3A_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 89.00 4.33 1.00 1 2 658.90070 1316.79411 0.31 39.30 9244 9244 MS2 19/22 Linfeng_081211_IgG_7.raw High GFAFVQYVNER 6 0 CID 57.75 4.31 1.00 1 2 665.32953 1329.65178 -5.17 37.32 4285 4285 MS2 17/20 Linfeng_091611_rIgG_7.raw High KSDVEAIFSK IPI:IPI00759596.1 11 1 CID 36.87 4.30 1.00 1 3 375.20367 1123.59647 -2.63 29.94 6102 6102 MS2 22/36 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00477313.3;IPI:IPI00759596.1 12 2 CID 73.10 4.29 1.00 1 2 658.89679 1316.78630 -5.63 39.34 4452 4452 MS2 20/22 Linfeng_091811_SIN3A_8.raw High VFIGNLNTLVVK 12 0 CID 75.89 4.26 1.00 1 2 658.89783 1316.78838 -4.05 38.96 4574 4574 MS2 20/22 Linfeng_091611_rIgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 89.60 4.20 1.00 1 2 658.90009 1316.79289 -0.62 38.91 9035 9035 MS2 19/22 Linfeng_081211_IgG_10.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 53.51 4.18 1.00 1 2 665.33313 1329.65898 0.24 37.52 8458 8458 MS2 17/20 Linfeng_081211_IgG_5.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 63.13 4.13 1.00 1 2 665.33264 1329.65801 -0.49 37.88 8767 8767 MS2 16/20 Linfeng_081211_IgG_6.raw High mIAGQVLDINLAAEPK IPI:IPI00759596.1 7 1 CID M1(Oxidation) 41.50 4.13 1.00 1 3 566.97491 1698.91019 0.36 37.67 8707 8707 MS2 22/60 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00477313.3;IPI:IPI00759596.1 12 2 CID 77.47 4.12 1.00 1 2 658.89691 1316.78655 -5.44 39.21 4585 4585 MS2 20/22 Linfeng_091811_SIN3A_6.raw High GFAFVQYVNER IPI:IPI00477313.3;IPI:IPI00759596.1 6 2 CID 60.21 4.09 1.00 1 2 665.32880 1329.65032 -6.28 37.69 4170 4170 MS2 17/20 Linfeng_091811_SIN3A_7.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 57.04 4.08 1.00 1 2 665.33313 1329.65898 0.24 40.67 9609 9609 MS2 17/20 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 64.34 3.94 1.00 1 2 658.90057 1316.79387 0.12 39.30 9045 9045 MS2 17/22 Linfeng_081211_IgG_4.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.95 3.92 1.00 1 2 658.90015 1316.79302 -0.53 40.99 9710 9710 MS2 20/22 Linfeng_081211_IgG_6.raw High GFAFVQYVNER IPI:IPI00759596.1 6 1 CID 49.37 3.89 1.00 1 2 665.33331 1329.65935 0.52 37.30 8479 8479 MS2 17/20 Linfeng_081211_IgG_10.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.53 3.85 1.00 1 2 658.90088 1316.79448 0.58 40.00 9397 9397 MS2 15/22 Linfeng_081211_IgG_6.raw High VDSLLENLEK IPI:IPI00759596.1 9 1 CID 52.83 3.74 1.00 1 2 580.31390 1159.62053 -0.02 36.49 8315 8315 MS2 16/18 Linfeng_081211_IgG_6.raw High GDDQLELIKDDEK IPI:IPI00759596.1 5 1 CID 55.86 3.74 1.00 1 2 759.36926 1517.73125 -1.18 29.37 5900 5900 MS2 15/24 Linfeng_081211_IgG_6.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 36.14 3.63 1.00 1 2 658.90027 1316.79326 -0.34 40.65 10068 10068 MS2 15/22 Linfeng_081211_IgG_3.raw High VFIGNLNTLVVK IPI:IPI00759596.1 12 1 CID 78.89 3.62 1.00 1 2 658.90039 1316.79350 -0.16 39.15 9317 9317 MS2 15/22 Linfeng_081211_IgG_8.raw High VDSLLENLEK IPI:IPI00759596.1 9 1 CID 61.95 3.61 1.00 1 2 580.31305 1159.61882 -1.49 36.55 8326 8326 MS2 16/18 Linfeng_081211_IgG_7.raw IPI:IPI00644224.2 784 86.8 6.43 "cDNA FLJ54020, highly similar to Heterogeneous nuclear ribonucleoprotein U" 29.46 82 13 342.27 17.47 25 9 259.46 24.36 24 9 369.99 26.66 33 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR IPI:IPI00644224.2 3 1 CID M16(Oxidation) 300.00 7.94 1.00 1 3 1048.14648 3142.42490 -3.02 30.77 3435 3435 MS2 34/124 Linfeng_091811_SIN3A_2.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR IPI:IPI00644224.2 3 1 CID 300.00 7.92 1.00 1 3 1042.81372 3126.42661 -4.11 32.94 3724 3724 MS2 36/124 Linfeng_091811_SIN3A_2.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR 3 0 CID M16(Oxidation) 142.47 7.84 1.00 1 3 1048.14709 3142.42673 -2.43 30.44 2936 2936 MS2 33/124 Linfeng_091611_rIgG_3.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR IPI:IPI00644224.2 3 1 CID M16(Oxidation) 159.55 7.65 1.00 1 3 1048.14697 3142.42636 -2.55 30.73 3476 3476 MS2 32/124 Linfeng_091811_SIN3A_3.raw High FDENDVITcFANFESDEVELSYAK IPI:IPI00644224.2 5 1 CID C9(Carbamidomethyl) 148.41 7.34 1.00 1 3 948.08691 2842.24619 2.14 51.72 6153 6153 MS2 37/92 Linfeng_091811_SIN3A_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 3 0 CID 143.98 7.31 1.00 1 3 1042.81604 3126.43357 -1.89 32.59 3205 3205 MS2 32/124 Linfeng_091611_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK 5 0 CID C9(Carbamidomethyl) 153.53 7.29 1.00 1 3 948.08423 2842.23813 -0.70 51.47 5583 5583 MS2 38/92 Linfeng_091611_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK 5 0 CID C9(Carbamidomethyl) 159.55 7.12 1.00 1 3 948.08392 2842.23722 -1.02 51.45 6211 6211 MS2 30/92 Linfeng_091611_rIgG_4.raw High FDENDVITcFANFESDEVELSYAK IPI:IPI00644224.2 5 1 CID C9(Carbamidomethyl) 150.00 7.08 1.00 1 3 948.08630 2842.24436 1.49 51.74 6136 6136 MS2 40/92 Linfeng_091811_SIN3A_2.raw High EKPYFPIPEEYTFIQNVPLEDR IPI:IPI00644224.2 4 1 CID 126.83 6.99 1.00 1 3 908.78790 2724.34916 -2.39 43.89 5147 5147 MS2 31/84 Linfeng_091811_SIN3A_2.raw High EKPYFPIPEEYTFIQNVPLEDR 4 0 CID 107.55 6.90 1.00 1 3 908.78778 2724.34879 -2.52 43.74 5248 5248 MS2 30/84 Linfeng_091611_rIgG_4.raw High EKPYFPIPEEYTFIQNVPLEDR 4 0 CID 108.99 6.44 1.00 1 3 908.78717 2724.34696 -3.19 43.62 4607 4607 MS2 30/84 Linfeng_091611_rIgG_3.raw High LSASSLTmESFAFLWAGGR 5 0 CID M8(Oxidation) 67.60 6.35 1.00 1 2 1023.99872 2046.99016 -2.58 49.02 5278 5278 MS2 20/36 Linfeng_091611_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR IPI:IPI00644224.2 4 1 CID 59.61 6.34 1.00 1 3 908.78894 2724.35227 -1.25 43.95 5213 5213 MS2 27/84 Linfeng_091811_SIN3A_4.raw High EKPYFPIPEEYTFIQNVPLEDR IPI:IPI00644224.2 4 1 CID 81.89 6.29 1.00 1 3 908.78833 2724.35044 -1.92 43.82 5172 5172 MS2 31/84 Linfeng_091811_SIN3A_3.raw High LSASSLTmESFAFLWAGGR 5 0 CID M8(Oxidation) 63.58 6.21 1.00 1 2 1024.00049 2046.99370 -0.85 48.95 5897 5897 MS2 22/36 Linfeng_091611_rIgG_4.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR IPI:IPI00644224.2 3 1 CID M16(Oxidation) 64.11 6.19 1.00 1 4 786.36169 3142.42495 -3.00 30.82 3441 3441 MS2 38/186 Linfeng_091811_SIN3A_2.raw High EKPYFPIPEEYTFIQNVPLEDR IPI:IPI00644224.2 4 1 CID 51.08 6.18 1.00 1 3 908.79053 2724.35703 0.50 43.90 10249 10249 MS2 27/84 Linfeng_081211_IgG_5.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 86.30 6.08 1.00 1 2 1024.00012 2046.99297 -1.21 49.34 5832 5832 MS2 20/36 Linfeng_091811_SIN3A_2.raw High EKPYFPIPEEYTFIQNVPLEDR 4 0 CID 93.03 6.00 1.00 1 3 908.78894 2724.35227 -1.25 43.82 5038 5038 MS2 28/84 Linfeng_091611_rIgG_2.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 75.93 5.96 1.00 1 2 824.42352 1647.83977 -3.16 33.83 3840 3840 MS2 25/28 Linfeng_091811_SIN3A_2.raw High GNFTLPEVAEcFDEITYVELQK IPI:IPI00644224.2 4 1 CID C11(Carbamidomethyl) 131.55 5.95 1.00 1 3 868.08514 2602.24088 1.01 52.33 6219 6219 MS2 27/84 Linfeng_091811_SIN3A_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 80.24 5.94 1.00 1 3 549.95160 1647.84024 -2.87 33.81 3838 3838 MS2 36/56 Linfeng_091811_SIN3A_2.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR 3 0 CID M16(Oxidation) 50.01 5.94 1.00 1 4 786.36169 3142.42495 -3.00 30.53 2947 2947 MS2 38/186 Linfeng_091611_rIgG_3.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY IPI:IPI00644224.2 4 1 CID 50.96 5.86 1.00 1 4 915.40161 3658.58462 -5.87 35.79 4098 4098 MS2 30/168 Linfeng_091811_SIN3A_2.raw High GNFTLPEVAEcFDEITYVELQK IPI:IPI00644224.2 4 1 CID C11(Carbamidomethyl) 121.74 5.86 1.00 1 3 868.08478 2602.23978 0.59 52.46 6221 6221 MS2 28/84 Linfeng_091811_SIN3A_2.raw High NFILDQTNVSAAAQR 4 0 CID 88.52 5.68 1.00 1 3 549.95160 1647.84024 -2.87 33.54 3325 3325 MS2 37/56 Linfeng_091611_rIgG_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 80.87 5.68 1.00 1 2 824.42395 1647.84062 -2.64 33.78 3877 3877 MS2 25/28 Linfeng_091811_SIN3A_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 79.86 5.62 1.00 1 3 549.95178 1647.84079 -2.54 33.70 3866 3866 MS2 36/56 Linfeng_091811_SIN3A_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 97.99 5.62 1.00 1 2 824.42584 1647.84441 -0.35 33.98 7377 7377 MS2 25/28 Linfeng_081211_IgG_4.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR IPI:IPI00644224.2 3 1 CID 69.76 5.58 1.00 1 3 1042.81982 3126.44492 1.75 34.48 7949 7949 MS2 26/124 Linfeng_081211_IgG_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 81.70 5.58 1.00 1 2 824.42529 1647.84331 -1.01 34.71 8033 8033 MS2 25/28 Linfeng_081211_IgG_3.raw High LSASSLTmESFAFLWAGGR 5 0 CID M8(Oxidation) 92.68 5.51 1.00 1 3 683.00201 2046.99149 -1.93 49.00 5903 5903 MS2 37/72 Linfeng_091611_rIgG_4.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 82.11 5.51 1.00 1 2 824.42633 1647.84538 0.24 34.20 7552 7552 MS2 25/28 Linfeng_081211_IgG_6.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 52.92 5.50 1.00 1 3 549.95361 1647.84629 0.79 34.67 8019 8019 MS2 27/56 Linfeng_081211_IgG_3.raw High LSASSLTMESFAFLWAGGR IPI:IPI00644224.2 5 1 CID 72.69 5.47 1.00 1 3 677.67102 2030.99851 -1.00 52.78 6260 6260 MS2 33/72 Linfeng_091811_SIN3A_3.raw High GNFTLPEVAEcFDEITYVELQK 4 0 CID C11(Carbamidomethyl) 127.79 5.41 1.00 1 3 868.08478 2602.23978 0.59 51.92 5640 5640 MS2 25/84 Linfeng_091611_rIgG_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 73.78 5.36 1.00 1 3 549.95361 1647.84629 0.79 34.16 7538 7538 MS2 31/56 Linfeng_081211_IgG_6.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 78.32 5.36 1.00 1 3 683.00256 2046.99314 -1.13 49.21 5848 5848 MS2 38/72 Linfeng_091811_SIN3A_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 73.12 5.31 1.00 1 3 549.95148 1647.83988 -3.10 33.92 3917 3917 MS2 35/56 Linfeng_091811_SIN3A_4.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 83.43 5.31 1.00 1 2 824.42529 1647.84331 -1.01 35.73 8413 8413 MS2 24/28 Linfeng_081211_IgG_3.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 91.84 5.30 1.00 1 3 683.00317 2046.99497 -0.23 49.27 5822 5822 MS2 37/72 Linfeng_091811_SIN3A_2.raw High LSASSLTmESFAFLWAGGR 5 0 CID M8(Oxidation) 79.15 5.30 1.00 1 3 683.00201 2046.99149 -1.93 48.96 5271 5271 MS2 39/72 Linfeng_091611_rIgG_3.raw High LSASSLTMESFAFLWAGGR 5 0 CID 74.57 5.28 1.00 1 3 677.67047 2030.99686 -1.81 52.44 5703 5703 MS2 28/72 Linfeng_091611_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQK 4 0 CID C11(Carbamidomethyl) 100.20 5.21 1.00 1 3 868.08325 2602.23520 -1.17 51.94 6270 6270 MS2 26/84 Linfeng_091611_rIgG_4.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 79.13 5.15 1.00 1 3 683.00299 2046.99442 -0.50 49.25 5846 5846 MS2 38/72 Linfeng_091811_SIN3A_4.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 3 0 CID 67.64 5.13 1.00 1 4 782.36310 3126.43056 -2.85 32.62 3209 3209 MS2 31/186 Linfeng_091611_rIgG_3.raw High LSASSLTmESFAFLWAGGR 5 0 CID M8(Oxidation) 66.75 5.09 1.00 1 3 683.00244 2046.99277 -1.31 49.06 5867 5867 MS2 38/72 Linfeng_091611_rIgG_5.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 57.43 5.06 1.00 1 3 682.99908 2046.98270 -6.23 49.35 6054 6054 MS2 32/72 Linfeng_091811_SIN3A_5.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 109.11 4.95 1.00 1 2 824.42572 1647.84416 -0.50 33.75 7338 7338 MS2 21/28 Linfeng_081211_IgG_10.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY 4 0 CID 41.21 4.91 1.00 1 4 915.40436 3658.59560 -2.86 35.26 3539 3539 MS2 30/168 Linfeng_091611_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQK 4 0 CID C11(Carbamidomethyl) 78.71 4.91 1.00 1 3 868.08356 2602.23612 -0.82 52.12 6246 6246 MS2 23/84 Linfeng_091611_rIgG_5.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 60.47 4.89 1.00 1 3 683.00287 2046.99405 -0.68 49.38 5864 5864 MS2 32/72 Linfeng_091811_SIN3A_6.raw High KDcEVVmmIGLPGAGK IPI:IPI00644224.2 4 1 CID "C3(Carbamidomethyl), M7(Oxidation), M8(Oxidation)" 40.50 4.87 1.00 1 3 579.61584 1736.83298 -2.94 29.68 3335 3335 MS2 25/60 Linfeng_091811_SIN3A_3.raw High LSASSLTmESFAFLWAGGR IPI:IPI00644224.2 5 1 CID M8(Oxidation) 58.39 4.86 1.00 1 3 683.00214 2046.99186 -1.75 49.54 5661 5661 MS2 30/72 Linfeng_091811_SIN3A_7.raw High GNFTLPEVAEcFDEITYVELQK 4 0 CID C11(Carbamidomethyl) 38.94 4.73 1.00 1 3 868.08618 2602.24399 2.20 53.10 5780 5780 MS2 22/84 Linfeng_091611_rIgG_3.raw High KDcEVVmmIGLPGAGK 4 0 CID "C3(Carbamidomethyl), M7(Oxidation), M8(Oxidation)" 44.55 4.70 1.00 1 3 579.61584 1736.83298 -2.94 29.39 2799 2799 MS2 21/60 Linfeng_091611_rIgG_3.raw High SSGPTSLFAVTVAPPGAR IPI:IPI00644224.2 4 1 CID 29.22 4.69 1.00 1 3 572.30713 1714.90683 -3.22 38.70 4515 4515 MS2 26/68 Linfeng_091811_SIN3A_3.raw High KDcEVVmMIGLPGAGK 4 0 CID "C3(Carbamidomethyl), M7(Oxidation)" 34.34 4.60 1.00 1 3 574.28406 1720.83762 -3.23 33.99 3380 3380 MS2 23/60 Linfeng_091611_rIgG_3.raw High LSASSLTMESFAFLWAGGR IPI:IPI00644224.2 5 1 CID 33.90 4.57 1.00 1 3 677.67029 2030.99631 -2.08 52.71 6248 6248 MS2 23/72 Linfeng_091811_SIN3A_2.raw High KDcEVVmmIGLPGAGK IPI:IPI00644224.2 4 1 CID "C3(Carbamidomethyl), M7(Oxidation), M8(Oxidation)" 36.48 4.55 1.00 1 3 579.61786 1736.83902 0.53 31.30 6743 6743 MS2 20/60 Linfeng_081211_IgG_3.raw High SSGPTSLFAVTVAPPGAR IPI:IPI00644224.2 4 1 CID 13.01 4.54 1.00 1 3 572.30927 1714.91324 0.52 39.69 9736 9736 MS2 23/68 Linfeng_081211_IgG_3.raw High YNILGTNTImDK 4 0 CID M10(Oxidation) 73.63 4.45 1.00 1 2 699.84772 1398.68816 -3.75 31.77 3102 3102 MS2 19/22 Linfeng_091611_rIgG_3.raw High KDcEVVmMIGLPGAGK IPI:IPI00644224.2 4 1 CID "C3(Carbamidomethyl), M7(Oxidation)" 26.23 4.45 1.00 1 3 574.28363 1720.83634 -3.98 34.23 3893 3893 MS2 23/60 Linfeng_091811_SIN3A_2.raw High KDcEVVmmIGLPGAGK IPI:IPI00644224.2 4 1 CID "C3(Carbamidomethyl), M7(Oxidation), M8(Oxidation)" 29.39 4.41 1.00 1 3 579.61566 1736.83243 -3.26 29.76 3297 3297 MS2 28/60 Linfeng_091811_SIN3A_2.raw High YNILGTNTIMDK IPI:IPI00644224.2 4 1 CID 34.75 4.40 1.00 1 2 691.85059 1382.69390 -3.32 35.59 4071 4071 MS2 19/22 Linfeng_091811_SIN3A_2.raw High EKPYFPIPEEYTFIQNVPLEDR IPI:IPI00644224.2 4 1 CID 44.03 4.40 1.00 1 3 908.79224 2724.36216 2.38 45.29 11617 11617 MS2 20/84 Linfeng_081211_IgG_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 69.04 4.38 1.00 1 2 824.42749 1647.84770 1.65 35.35 7278 7278 MS2 20/28 Linfeng_081211_IgG_2.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 44.30 4.37 1.00 1 3 549.95416 1647.84793 1.79 34.20 7549 7549 MS2 25/56 Linfeng_081211_IgG_7.raw High YNILGTNTImDK IPI:IPI00644224.2 4 1 CID M10(Oxidation) 77.56 4.36 1.00 1 2 699.84888 1398.69048 -2.09 31.99 3644 3644 MS2 20/22 Linfeng_091811_SIN3A_3.raw High NFILDQTNVSAAAQR IPI:IPI00644224.2 4 1 CID 48.50 4.33 1.00 1 3 549.95300 1647.84446 -0.32 33.94 7364 7364 MS2 25/56 Linfeng_081211_IgG_4.raw High YNILGTNTImDK IPI:IPI00644224.2 4 1 CID M10(Oxidation) 68.74 4.29 1.00 1 2 699.84802 1398.68877 -3.31 32.02 3602 3602 MS2 20/22 Linfeng_091811_SIN3A_2.raw High DcEVVMmIGLPGAGK IPI:IPI00644224.2 4 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 70.60 4.25 1.00 1 2 796.87671 1592.74614 -1.30 38.88 9481 9481 MS2 16/28 Linfeng_081211_IgG_3.raw High DcEVVmmIGLPGAGK IPI:IPI00644224.2 4 1 CID "C2(Carbamidomethyl), M6(Oxidation), M7(Oxidation)" 84.77 4.23 1.00 1 2 804.87482 1608.74236 -0.48 34.77 8057 8057 MS2 19/28 Linfeng_081211_IgG_3.raw High YNILGTNTImDK IPI:IPI00644224.2 4 1 CID M10(Oxidation) 55.56 4.17 1.00 1 2 699.84937 1398.69145 -1.39 33.23 7472 7472 MS2 17/22 Linfeng_081211_IgG_3.raw High GYFEYIEENK IPI:IPI00644224.2 5 1 CID 50.76 4.13 1.00 1 2 646.29529 1291.58330 -0.65 35.66 8389 8389 MS2 15/18 Linfeng_081211_IgG_3.raw High TcNcETEDYGEK IPI:IPI00644224.2 5 1 CID "C2(Carbamidomethyl), C4(Carbamidomethyl)" 74.98 3.90 1.00 1 2 753.28070 1505.55412 1.44 19.40 2727 2727 MS2 16/22 Linfeng_081211_IgG_3.raw High GYFEYIEENK IPI:IPI00644224.2 5 1 CID 54.10 3.90 1.00 1 2 646.29462 1291.58196 -1.69 35.07 7865 7865 MS2 15/18 Linfeng_081211_IgG_6.raw High YNILGTNTIMDK IPI:IPI00644224.2 4 1 CID 68.76 3.87 1.00 1 2 691.85358 1382.69988 1.01 36.73 8744 8744 MS2 19/22 Linfeng_081211_IgG_3.raw High YNILGTNTImDK IPI:IPI00644224.2 4 1 CID M10(Oxidation) 31.90 3.72 1.00 1 2 699.84949 1398.69170 -1.21 32.59 6840 6840 MS2 16/22 Linfeng_081211_IgG_5.raw High YNILGTNTImDK IPI:IPI00644224.2 4 1 CID M10(Oxidation) 58.61 3.66 1.00 1 2 699.84949 1398.69170 -1.21 32.52 6962 6962 MS2 18/22 Linfeng_081211_IgG_6.raw High GYFEYIEENK IPI:IPI00644224.2 5 1 CID 49.42 3.56 1.00 1 2 646.29614 1291.58501 0.67 37.94 9173 9173 MS2 15/18 Linfeng_081211_IgG_3.raw IPI:IPI00844578.1 1270 140.9 6.84 ATP-dependent RNA helicase A 30.16 93 27 365.17 13.46 25 13 427.94 23.78 36 19 344.10 18.98 32 16 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High DKDDDGGEDDDANcNLIcGDEYGPETR IPI:IPI00844578.1 1 1 CID "C14(Carbamidomethyl), C18(Carbamidomethyl)" 176.54 7.08 1.00 1 3 1015.72205 3045.15158 -2.57 30.60 3346 3346 MS2 33/104 Linfeng_091611_rIgG_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR IPI:IPI00844578.1 1 1 CID "C14(Carbamidomethyl), C18(Carbamidomethyl)" 130.03 6.84 1.00 1 3 1015.72162 3045.15030 -2.99 30.72 3427 3427 MS2 40/104 Linfeng_091811_SIN3A_2.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 115.70 6.76 1.00 1 3 583.33917 1748.00296 0.12 54.33 6412 6412 MS2 32/60 Linfeng_091811_SIN3A_2.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 82.53 6.46 1.00 1 3 684.01190 2050.02115 -1.43 46.88 5525 5525 MS2 29/64 Linfeng_091811_SIN3A_2.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 74.51 6.20 1.00 1 3 684.01154 2050.02005 -1.96 46.71 4996 4996 MS2 31/64 Linfeng_091611_rIgG_3.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 83.77 6.18 1.00 1 3 684.01233 2050.02243 -0.80 46.59 5384 5384 MS2 31/64 Linfeng_091611_rIgG_2.raw High FSDHVALLSVFQAWDDAR IPI:IPI00844578.1 1 1 CID 59.28 6.15 1.00 1 3 693.00836 2077.01053 -1.60 47.46 5084 5084 MS2 27/68 Linfeng_091611_rIgG_3.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 85.38 6.14 1.00 1 3 684.01221 2050.02207 -0.98 46.94 5567 5567 MS2 30/64 Linfeng_091811_SIN3A_3.raw High FSDHVALLSVFQAWDDAR IPI:IPI00844578.1 1 1 CID 75.59 5.90 1.00 1 3 693.00861 2077.01126 -1.25 47.72 5662 5662 MS2 27/68 Linfeng_091811_SIN3A_3.raw High FSDHVALLSVFQAWDDAR IPI:IPI00844578.1 1 1 CID 62.91 5.87 1.00 1 3 693.00830 2077.01035 -1.69 47.74 5633 5633 MS2 27/68 Linfeng_091811_SIN3A_2.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 66.46 5.86 1.00 1 3 725.73828 2175.20029 -0.81 45.48 5245 5245 MS2 31/72 Linfeng_091611_rIgG_2.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 29.10 5.82 1.00 1 3 684.01001 2050.01548 -4.20 46.72 5619 5619 MS2 28/64 Linfeng_091611_rIgG_4.raw High AENNSEVGASGYGVPGPTWDR IPI:IPI00844578.1 1 1 CID 126.21 5.78 1.00 1 2 1081.98694 2162.96660 -3.35 32.85 3635 3635 MS2 21/40 Linfeng_091611_rIgG_2.raw High FESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 45.57 5.68 1.00 1 3 683.04028 2047.10630 -0.39 48.90 5809 5809 MS2 28/68 Linfeng_091811_SIN3A_3.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 76.83 5.60 1.00 1 3 725.73773 2175.19864 -1.57 45.67 5405 5405 MS2 31/72 Linfeng_091811_SIN3A_3.raw High NELmYQLEQDHDLQAILQER IPI:IPI00844578.1 1 1 CID M4(Oxidation) 135.04 5.58 1.00 1 3 834.73376 2502.18674 -2.51 40.32 4689 4689 MS2 31/76 Linfeng_091811_SIN3A_2.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 62.37 5.57 1.00 1 3 725.73767 2175.19846 -1.66 45.51 5470 5470 MS2 30/72 Linfeng_091611_rIgG_4.raw High QISRPSAAGINLmIGSTR IPI:IPI00844578.1 1 1 CID M13(Oxidation) 45.81 5.56 1.00 1 3 630.00488 1888.00010 -3.66 30.68 3357 3357 MS2 28/68 Linfeng_091611_rIgG_2.raw High QLYHLGVVEAYSGLTK IPI:IPI00844578.1 1 1 CID 25.80 5.55 1.00 1 3 593.31708 1777.93668 -6.57 35.70 4086 4086 MS2 24/60 Linfeng_091811_SIN3A_2.raw High ELDALDANDELTPLGR IPI:IPI00844578.1 1 1 CID 92.43 5.55 1.00 1 2 871.43036 1741.85344 -3.98 37.71 4259 4259 MS2 22/30 Linfeng_091611_rIgG_2.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 34.25 5.45 1.00 1 3 547.28925 1639.85318 -3.26 31.25 3499 3499 MS2 29/56 Linfeng_091811_SIN3A_2.raw High FESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 103.42 5.44 1.00 1 3 683.04053 2047.10703 -0.03 48.64 5638 5638 MS2 31/68 Linfeng_091611_rIgG_2.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 100.46 5.43 1.00 1 3 583.33942 1748.00370 0.54 54.11 5888 5888 MS2 30/60 Linfeng_091611_rIgG_3.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 43.31 5.40 1.00 1 3 547.28931 1639.85337 -3.15 30.87 2991 2991 MS2 27/56 Linfeng_091611_rIgG_3.raw High FSDHVALLSVFQAWDDAR IPI:IPI00844578.1 1 1 CID 78.12 5.40 1.00 1 3 693.00928 2077.01328 -0.28 47.44 5489 5489 MS2 24/68 Linfeng_091611_rIgG_2.raw High FSDHVALLSVFQAWDDAR IPI:IPI00844578.1 1 1 CID 64.56 5.39 1.00 1 3 693.00800 2077.00943 -2.13 47.54 5720 5720 MS2 25/68 Linfeng_091611_rIgG_4.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 78.27 5.32 1.00 1 3 725.73694 2175.19626 -2.67 45.43 4834 4834 MS2 32/72 Linfeng_091611_rIgG_3.raw High FmcEVQVEGYNYTGmGNSTNKK IPI:IPI00844578.1 2 1 CID "M2(Oxidation), C3(Carbamidomethyl), M15(Oxidation)" 23.29 5.32 1.00 1 3 863.70428 2589.09830 -2.79 28.39 3050 3050 MS2 19/84 Linfeng_091611_rIgG_2.raw High FESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 47.43 5.32 1.00 1 3 683.03998 2047.10538 -0.84 48.89 5806 5806 MS2 27/68 Linfeng_091811_SIN3A_4.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 112.91 5.29 1.00 1 2 1025.51477 2050.02226 -0.89 46.64 5390 5390 MS2 23/32 Linfeng_091611_rIgG_2.raw High GMTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID 77.12 5.27 1.00 1 3 578.00745 1732.00779 -0.03 54.98 6494 6494 MS2 23/60 Linfeng_091811_SIN3A_2.raw High LFTAHNNmTNYATVWASK IPI:IPI00844578.1 1 1 CID M8(Oxidation) 82.55 5.19 1.00 1 3 695.66504 2084.98056 -2.56 31.70 3488 3488 MS2 28/68 Linfeng_091611_rIgG_2.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 35.03 5.19 1.00 1 3 547.28955 1639.85410 -2.70 31.06 3406 3406 MS2 28/56 Linfeng_091611_rIgG_2.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 68.86 5.16 1.00 1 3 725.73877 2175.20176 -0.14 45.72 5445 5445 MS2 32/72 Linfeng_091811_SIN3A_4.raw High KFESEILEAISQNSVVIIR IPI:IPI00844578.1 1 1 CID 61.32 5.16 1.00 1 3 725.73633 2175.19443 -3.51 45.83 5392 5392 MS2 24/72 Linfeng_091811_SIN3A_2.raw High AENNSEVGASGYGVPGPTWDR IPI:IPI00844578.1 1 1 CID 87.02 5.15 1.00 1 2 1081.98938 2162.97148 -1.09 33.84 7699 7699 MS2 21/40 Linfeng_081211_IgG_3.raw High GISHVIVDEIHER IPI:IPI00844578.1 1 1 CID 80.08 5.09 1.00 1 3 501.93262 1503.78330 -5.44 28.39 3111 3111 MS2 32/48 Linfeng_091811_SIN3A_2.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 123.72 5.08 1.00 1 2 874.50586 1748.00444 0.97 54.37 6417 6417 MS2 20/30 Linfeng_091811_SIN3A_2.raw High QLYHLGVVEAYSGLTK IPI:IPI00844578.1 1 1 CID 41.60 5.08 1.00 1 3 593.31799 1777.93943 -5.03 35.48 3972 3972 MS2 29/60 Linfeng_091611_rIgG_2.raw High ELDALDANDELTPLGR IPI:IPI00844578.1 1 1 CID 102.53 5.07 1.00 1 2 871.43018 1741.85307 -4.19 37.97 4385 4385 MS2 22/30 Linfeng_091811_SIN3A_2.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 28.27 5.03 1.00 1 3 547.29047 1639.85685 -1.02 31.66 6621 6621 MS2 26/56 Linfeng_081211_IgG_4.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 57.64 4.95 1.00 1 2 1025.51794 2050.02861 2.21 47.05 5442 5442 MS2 21/32 Linfeng_091611_rIgG_2.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 72.90 4.88 1.00 1 2 1025.51526 2050.02324 -0.41 47.03 5544 5544 MS2 23/32 Linfeng_091811_SIN3A_2.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 44.84 4.81 1.00 1 3 547.29059 1639.85721 -0.80 31.67 6499 6499 MS2 24/56 Linfeng_081211_IgG_5.raw High NELmYQLEQDHDLQAILQER IPI:IPI00844578.1 1 1 CID M4(Oxidation) 83.61 4.79 1.00 1 3 834.73395 2502.18729 -2.29 40.06 4560 4560 MS2 28/76 Linfeng_091611_rIgG_2.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 69.83 4.78 1.00 1 2 644.85400 1288.70073 -2.73 32.11 3541 3541 MS2 20/22 Linfeng_091611_rIgG_2.raw High LQISHEAAAcITGLR IPI:IPI00844578.1 1 1 CID C10(Carbamidomethyl) 42.94 4.68 1.00 1 3 547.28882 1639.85190 -4.04 31.17 3534 3534 MS2 24/56 Linfeng_091811_SIN3A_3.raw High GISHVIVDEIHER IPI:IPI00844578.1 1 1 CID 77.11 4.66 1.00 1 3 501.93378 1503.78678 -3.13 28.15 3018 3018 MS2 29/48 Linfeng_091611_rIgG_2.raw High ELDALDANDELTPLGR IPI:IPI00844578.1 1 1 CID 54.38 4.65 1.00 1 3 581.28986 1741.85501 -3.08 37.85 4277 4277 MS2 32/60 Linfeng_091611_rIgG_2.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 128.24 4.65 1.00 1 3 583.33997 1748.00534 1.49 54.09 6264 6264 MS2 29/60 Linfeng_091611_rIgG_2.raw High TTQVPQFILDDFIQNDR IPI:IPI00844578.1 1 1 CID 23.91 4.64 1.00 1 3 684.01245 2050.02280 -0.62 46.93 5594 5594 MS2 22/64 Linfeng_091811_SIN3A_4.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 65.70 4.64 1.00 1 2 874.50568 1748.00408 0.76 54.14 5892 5892 MS2 19/30 Linfeng_091611_rIgG_3.raw High GmTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID M2(Oxidation) 123.79 4.59 1.00 1 2 874.50739 1748.00749 2.72 54.15 6272 6272 MS2 21/30 Linfeng_091611_rIgG_2.raw High KVQSDGQIVLVDDWIK IPI:IPI00844578.1 1 1 CID 12.72 4.59 1.00 1 3 615.00110 1842.98874 -3.98 38.63 4470 4470 MS2 25/60 Linfeng_091811_SIN3A_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 31.52 4.58 1.00 1 3 473.27194 1417.80127 -2.64 53.71 6345 6345 MS2 20/44 Linfeng_091811_SIN3A_3.raw High AENNSEVGASGYGVPGPTWDR IPI:IPI00844578.1 1 1 CID 89.32 4.54 1.00 1 3 721.66077 2162.96775 -2.82 32.82 3632 3632 MS2 31/80 Linfeng_091611_rIgG_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 26.81 4.54 1.00 1 3 473.27237 1417.80255 -1.73 53.61 6341 6341 MS2 24/44 Linfeng_091811_SIN3A_2.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 79.89 4.52 1.00 1 2 644.85327 1288.69927 -3.86 32.27 3635 3635 MS2 20/22 Linfeng_091811_SIN3A_2.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 62.59 4.47 1.00 1 2 644.85474 1288.70220 -1.59 33.48 7571 7571 MS2 15/22 Linfeng_081211_IgG_3.raw High QLYHLGVVEAYSGLTK IPI:IPI00844578.1 1 1 CID 51.02 4.46 1.00 1 3 593.32043 1777.94675 -0.91 36.35 8083 8083 MS2 22/60 Linfeng_081211_IgG_4.raw High AAmEALVVEVTK IPI:IPI00844578.1 1 1 CID M3(Oxidation) 74.76 4.46 1.00 1 2 638.84210 1276.67693 -3.81 30.17 2899 2899 MS2 18/22 Linfeng_091611_rIgG_3.raw High TPLHEIALSIK IPI:IPI00844578.1 1 1 CID 68.11 4.43 1.00 1 3 407.90997 1221.71537 -3.96 31.85 3578 3578 MS2 25/40 Linfeng_091811_SIN3A_2.raw High SSVNcPFSSQDmK IPI:IPI00844578.1 1 1 CID "C5(Carbamidomethyl), M12(Oxidation)" 76.38 4.41 1.00 1 2 751.81274 1502.61821 -4.56 23.56 2441 2441 MS2 19/24 Linfeng_091811_SIN3A_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 50.33 4.40 1.00 1 2 709.40601 1417.80474 -0.19 53.32 6194 6194 MS2 17/22 Linfeng_091611_rIgG_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 52.12 4.39 1.00 1 2 709.40594 1417.80461 -0.28 53.32 5808 5808 MS2 17/22 Linfeng_091611_rIgG_3.raw High AAmEALVVEVTK IPI:IPI00844578.1 1 1 CID M3(Oxidation) 74.67 4.37 1.00 1 2 638.84259 1276.67790 -3.05 30.28 3303 3303 MS2 18/22 Linfeng_091611_rIgG_2.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 59.26 4.36 1.00 1 2 644.85474 1288.70220 -1.59 32.34 3689 3689 MS2 16/22 Linfeng_091811_SIN3A_3.raw High TPLHEIALSIK IPI:IPI00844578.1 1 1 CID 57.15 4.31 1.00 1 3 407.91052 1221.71701 -2.61 31.93 3636 3636 MS2 21/40 Linfeng_091811_SIN3A_3.raw High AENNSEVGASGYGVPGPTWDR IPI:IPI00844578.1 1 1 CID 76.16 4.25 1.00 1 2 1081.99060 2162.97392 0.03 34.14 6949 6949 MS2 19/40 Linfeng_081211_IgG_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 49.33 4.24 1.00 1 2 709.40735 1417.80742 1.70 53.57 6337 6337 MS2 17/22 Linfeng_091811_SIN3A_2.raw High GMTLVTPLQLLLFASK IPI:IPI00844578.1 1 1 CID 89.88 4.18 1.00 1 2 866.50836 1732.00945 0.93 54.99 6495 6495 MS2 19/30 Linfeng_091811_SIN3A_2.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 49.30 4.15 1.00 1 2 709.40601 1417.80474 -0.19 53.41 6434 6434 MS2 17/22 Linfeng_091611_rIgG_4.raw High ELDALDANDELTPLGR IPI:IPI00844578.1 1 1 CID 67.61 4.14 1.00 1 2 871.43475 1741.86223 1.06 37.99 8628 8628 MS2 18/30 Linfeng_081211_IgG_4.raw High RISAVSVAER IPI:IPI00844578.1 1 1 CID 28.56 4.12 1.00 1 2 544.31287 1087.61846 -3.16 20.20 1922 1922 MS2 17/18 Linfeng_091611_rIgG_2.raw High ELDALDANDELTPLGR IPI:IPI00844578.1 1 1 CID 48.29 4.11 1.00 1 2 871.43372 1741.86016 -0.13 38.55 9372 9372 MS2 17/30 Linfeng_081211_IgG_3.raw High DINTDFLLVVLR IPI:IPI00844578.1 1 1 CID 52.29 4.10 1.00 1 2 709.40570 1417.80412 -0.63 53.60 6336 6336 MS2 17/22 Linfeng_091811_SIN3A_3.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 63.93 4.09 1.00 1 2 644.85474 1288.70220 -1.59 34.06 6928 6928 MS2 18/22 Linfeng_081211_IgG_2.raw High AAEcNIVVTQPR IPI:IPI00844578.1 1 1 CID C4(Carbamidomethyl) 55.95 4.09 1.00 1 2 679.34644 1357.68559 -2.75 26.22 5064 5064 MS2 18/22 Linfeng_081211_IgG_3.raw High SSVNcPFSSQDmK IPI:IPI00844578.1 1 1 CID "C5(Carbamidomethyl), M12(Oxidation)" 73.92 4.02 1.00 1 2 751.81488 1502.62248 -1.72 25.25 4731 4731 MS2 17/24 Linfeng_081211_IgG_3.raw High AAmEALVVEVTK IPI:IPI00844578.1 1 1 CID M3(Oxidation) 43.77 4.00 1.00 1 2 638.84509 1276.68291 0.87 30.77 6322 6322 MS2 15/22 Linfeng_081211_IgG_4.raw High RISAVSVAER IPI:IPI00844578.1 1 1 CID 12.57 3.89 1.00 1 2 544.31549 1087.62370 1.67 21.70 3419 3419 MS2 12/18 Linfeng_081211_IgG_4.raw High SSVNcPFSSQDmK IPI:IPI00844578.1 1 1 CID "C5(Carbamidomethyl), M12(Oxidation)" 80.30 3.86 1.00 1 2 751.81439 1502.62151 -2.37 25.50 4448 4448 MS2 17/24 Linfeng_081211_IgG_2.raw High AAEcNIVVTQPR IPI:IPI00844578.1 1 1 CID C4(Carbamidomethyl) 41.91 3.83 1.00 1 2 679.34735 1357.68743 -1.40 25.43 4637 4637 MS2 16/22 Linfeng_081211_IgG_4.raw High VQSDGQIVLVDDWIK IPI:IPI00844578.1 1 1 CID 45.38 3.81 1.00 1 2 857.95538 1714.90349 1.39 42.38 9932 9932 MS2 14/28 Linfeng_081211_IgG_4.raw High mGGEEAEIR IPI:IPI00844578.1 1 1 CID M1(Oxidation) 38.12 3.78 1.00 1 2 504.22742 1007.44756 1.24 19.78 2661 2661 MS2 15/16 Linfeng_081211_IgG_2.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 54.11 3.77 1.00 1 2 644.85553 1288.70378 -0.36 32.55 6914 6914 MS2 17/22 Linfeng_081211_IgG_4.raw High LGGIGQFLAK IPI:IPI00844578.1 1 1 CID 53.93 3.70 1.00 1 2 502.30093 1003.59459 1.04 37.37 8963 8963 MS2 17/18 Linfeng_081211_IgG_3.raw High MGGEEAEIR IPI:IPI00844578.1 1 1 CID 47.09 3.65 1.00 1 2 496.23022 991.45317 1.80 22.74 3569 3569 MS2 15/16 Linfeng_081211_IgG_2.raw High AAmEALVVEVTK IPI:IPI00844578.1 1 1 CID M3(Oxidation) 75.69 3.65 1.00 1 2 638.84467 1276.68205 0.20 31.68 6886 6886 MS2 16/22 Linfeng_081211_IgG_3.raw High LAAQScALSLVR IPI:IPI00844578.1 1 1 CID C6(Carbamidomethyl) 60.62 3.59 1.00 1 2 644.85461 1288.70195 -1.78 32.67 6867 6867 MS2 15/22 Linfeng_081211_IgG_5.raw High DVVQAYPEVR IPI:IPI00844578.1 1 1 CID 50.94 3.58 1.00 1 2 588.30585 1175.60442 -0.97 29.17 5955 5955 MS2 15/18 Linfeng_081211_IgG_3.raw High AAEcNIVVTQPR IPI:IPI00844578.1 1 1 CID C4(Carbamidomethyl) 57.94 3.47 1.00 1 2 679.34851 1357.68974 0.31 26.53 4766 4766 MS2 14/22 Linfeng_081211_IgG_2.raw High mGGEEAEIR IPI:IPI00844578.1 1 1 CID M1(Oxidation) 38.32 3.47 1.00 1 2 504.22672 1007.44615 -0.15 18.79 2497 2497 MS2 15/16 Linfeng_081211_IgG_4.raw IPI:IPI00414101.4 1557 177.4 8.75 Isoform 2 of DNA topoisomerase 2-alpha 28.20 102 32 403.69 9.57 26 12 488.07 22.93 40 23 404.90 21.45 36 25 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High AGEmELKPFNGEDYTcITFQPDLSK IPI:IPI00414101.4 7 1 CID "M4(Oxidation), C16(Carbamidomethyl)" 104.07 7.86 1.00 1 3 969.44220 2906.31205 -3.57 38.23 4325 4325 MS2 32/96 Linfeng_091611_rIgG_2.raw High SDSVTDSGPTFNYLLDmPLWYLTK IPI:IPI00414101.4 7 1 CID M17(Oxidation) 72.61 7.76 1.00 1 3 927.11005 2779.31559 -0.59 52.23 6084 6084 MS2 30/92 Linfeng_091611_rIgG_2.raw High mYVPALIFGQLLTSSNYDDDEK IPI:IPI00414101.4 7 1 CID M1(Oxidation) 134.72 7.59 1.00 1 3 845.73627 2535.19425 -0.71 50.29 5845 5845 MS2 31/84 Linfeng_091611_rIgG_2.raw High mYVPALIFGQLLTSSNYDDDEK IPI:IPI00414101.4 7 1 CID M1(Oxidation) 150.00 7.43 1.00 1 3 845.73657 2535.19516 -0.35 50.67 6002 6002 MS2 31/84 Linfeng_091811_SIN3A_2.raw High KLLGLPEDYLYGQTTTYLTYNDFINK IPI:IPI00414101.4 7 1 CID 71.78 7.07 1.00 1 3 1028.52307 3083.55466 -2.14 45.82 5391 5391 MS2 29/100 Linfeng_091811_SIN3A_2.raw High KLLGLPEDYLYGQTTTYLTYNDFINK IPI:IPI00414101.4 7 1 CID 80.72 6.98 1.00 1 3 1028.52417 3083.55796 -1.07 45.55 5253 5253 MS2 30/100 Linfeng_091611_rIgG_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK IPI:IPI00414101.4 7 1 CID 140.15 6.95 1.00 1 3 985.82715 2955.46689 0.20 50.15 5936 5936 MS2 37/96 Linfeng_091811_SIN3A_2.raw High MYVPALIFGQLLTSSNYDDDEK IPI:IPI00414101.4 7 1 CID 77.71 6.78 1.00 1 3 840.40369 2519.19651 -1.84 53.61 6223 6223 MS2 31/84 Linfeng_091611_rIgG_2.raw High mYVPALIFGQLLTSSNYDDDEK IPI:IPI00414101.4 7 1 CID M1(Oxidation) 142.39 6.78 1.00 1 2 1268.10034 2535.19341 -1.04 50.34 5852 5852 MS2 25/42 Linfeng_091611_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK IPI:IPI00414101.4 7 1 CID 118.72 6.55 1.00 1 3 762.70581 2286.10288 -2.98 28.34 3043 3043 MS2 34/80 Linfeng_091611_rIgG_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK IPI:IPI00414101.4 7 1 CID 112.57 6.53 1.00 1 3 985.82599 2955.46341 -0.98 49.82 5785 5785 MS2 33/96 Linfeng_091611_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK IPI:IPI00414101.4 7 1 CID 300.00 6.26 1.00 1 3 762.70538 2286.10160 -3.54 28.67 3151 3151 MS2 35/80 Linfeng_091811_SIN3A_2.raw High NENTEGSPQEDGVELEGLK IPI:IPI00414101.4 7 1 CID 132.49 6.22 1.00 1 2 1022.96686 2044.92644 -2.06 30.98 3396 3396 MS2 22/36 Linfeng_091611_rIgG_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 45.82 6.11 1.00 1 3 602.97247 1806.90287 1.12 54.08 6262 6262 MS2 33/60 Linfeng_091611_rIgG_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 48.43 6.01 1.00 1 3 602.97205 1806.90158 0.41 54.29 6407 6407 MS2 33/60 Linfeng_091811_SIN3A_2.raw High VTIDPENNLISIWNNGK IPI:IPI00414101.4 7 1 CID 118.18 5.98 1.00 1 2 963.99835 1926.98943 -1.36 43.55 5004 5004 MS2 19/32 Linfeng_091611_rIgG_2.raw High AAIGcGIVESILNWVK IPI:IPI00414101.4 4 1 CID C5(Carbamidomethyl) 61.04 5.95 1.00 1 3 577.31677 1729.93576 2.96 54.68 6323 6323 MS2 30/60 Linfeng_091611_rIgG_2.raw High YSGPEDDAAISLAFSK IPI:IPI00414101.4 7 1 CID 104.59 5.86 1.00 1 2 835.89380 1670.78032 -6.32 37.53 4327 4327 MS2 20/30 Linfeng_091811_SIN3A_2.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 87.55 5.84 1.00 1 3 542.95251 1626.84299 -3.49 38.14 4314 4314 MS2 31/56 Linfeng_091611_rIgG_2.raw High NSTEcTLILTEGDSAK IPI:IPI00414101.4 7 1 CID C5(Carbamidomethyl) 100.80 5.76 1.00 1 2 869.90845 1738.80962 -3.93 30.97 3462 3462 MS2 23/30 Linfeng_091811_SIN3A_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 101.02 5.74 1.00 1 2 903.95618 1806.90508 2.34 54.30 6409 6409 MS2 22/30 Linfeng_091811_SIN3A_2.raw High AAIGcGIVESILNWVK IPI:IPI00414101.4 4 1 CID C5(Carbamidomethyl) 102.04 5.73 1.00 1 2 865.47131 1729.93535 2.72 54.70 6325 6325 MS2 22/30 Linfeng_091611_rIgG_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 92.77 5.71 1.00 1 2 903.95709 1806.90691 3.35 54.12 6268 6268 MS2 23/30 Linfeng_091611_rIgG_2.raw High AAIGcGIVESILNWVK IPI:IPI00414101.4 4 1 CID C5(Carbamidomethyl) 112.35 5.67 1.00 1 2 865.46960 1729.93193 0.74 54.81 6473 6473 MS2 22/30 Linfeng_091811_SIN3A_2.raw High NSTEcTLILTEGDSAK IPI:IPI00414101.4 7 1 CID C5(Carbamidomethyl) 74.54 5.65 1.00 1 2 869.90979 1738.81230 -2.38 30.76 3367 3367 MS2 20/30 Linfeng_091611_rIgG_2.raw High YSGPEDDAAISLAFSK IPI:IPI00414101.4 7 1 CID 88.43 5.55 1.00 1 2 835.89459 1670.78191 -5.37 37.35 4213 4213 MS2 19/30 Linfeng_091611_rIgG_2.raw High NSTEcTLILTEGDSAK IPI:IPI00414101.4 7 1 CID C5(Carbamidomethyl) 80.72 5.49 1.00 1 2 869.90985 1738.81243 -2.31 30.76 2977 2977 MS2 20/30 Linfeng_091611_rIgG_3.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 93.43 5.47 1.00 1 3 542.95233 1626.84244 -3.82 38.29 4427 4427 MS2 30/56 Linfeng_091811_SIN3A_2.raw High VTIDPENNLISIWNNGK IPI:IPI00414101.4 7 1 CID 38.48 5.41 1.00 1 3 643.00098 1926.98838 -1.91 43.53 5002 5002 MS2 28/64 Linfeng_091611_rIgG_2.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 44.10 5.40 1.00 1 3 542.95215 1626.84189 -4.16 38.08 3900 3900 MS2 22/56 Linfeng_091611_rIgG_3.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 79.71 5.39 1.00 1 2 813.92505 1626.84282 -3.59 38.32 4430 4430 MS2 21/28 Linfeng_091811_SIN3A_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 46.48 5.37 1.00 1 3 602.97229 1806.90232 0.81 54.13 5891 5891 MS2 33/60 Linfeng_091611_rIgG_3.raw High AAIGcGIVESILNWVK IPI:IPI00414101.4 4 1 CID C5(Carbamidomethyl) 61.85 5.36 1.00 1 3 577.31512 1729.93082 0.10 54.81 6472 6472 MS2 36/60 Linfeng_091811_SIN3A_2.raw High YSGPEDDAAISLAFSK IPI:IPI00414101.4 7 1 CID 49.51 5.36 1.00 1 3 557.59869 1670.78153 -5.60 37.27 4202 4202 MS2 28/60 Linfeng_091611_rIgG_2.raw High NHMWIFVNALIENPTFDSQTK IPI:IPI00414101.4 5 1 CID 29.93 5.34 1.00 1 3 835.74561 2505.22226 -0.38 47.06 5443 5443 MS2 22/80 Linfeng_091611_rIgG_2.raw High VTIDPENNLISIWNNGK IPI:IPI00414101.4 7 1 CID 44.76 5.33 1.00 1 3 643.00073 1926.98764 -2.29 43.75 5129 5129 MS2 29/64 Linfeng_091811_SIN3A_2.raw High ImIMTDQDQDGSHIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID M2(Oxidation) 66.48 5.26 1.00 1 3 583.26874 1747.79166 -4.22 25.50 2711 2711 MS2 28/56 Linfeng_091811_SIN3A_2.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 101.92 5.06 1.00 1 2 813.92517 1626.84307 -3.44 38.11 4311 4311 MS2 21/28 Linfeng_091611_rIgG_2.raw High AAIGcGIVESILNWVK IPI:IPI00414101.4 4 1 CID C5(Carbamidomethyl) 24.80 5.06 1.00 1 3 577.31531 1729.93137 0.42 54.74 5961 5961 MS2 29/60 Linfeng_091611_rIgG_3.raw High NSTEcTLILTEGDSAK IPI:IPI00953508.1 7 1 CID C5(Carbamidomethyl) 70.95 5.02 1.00 1 2 869.91028 1738.81328 -1.82 32.37 6436 6436 MS2 19/30 Linfeng_081211_IgG_2.raw High ImIMTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID M2(Oxidation) 68.68 5.01 1.00 1 3 583.26898 1747.79239 -3.80 25.42 2651 2651 MS2 28/56 Linfeng_091611_rIgG_2.raw High RDPALNSGVSQKPDPAK IPI:IPI00414101.4 7 1 CID 108.24 5.01 1.00 1 3 593.98157 1779.93015 -2.66 18.00 1674 1674 MS2 31/64 Linfeng_091811_SIN3A_2.raw High ImImTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID "M2(Oxidation), M4(Oxidation)" 96.10 4.91 1.00 1 3 588.59924 1763.78318 -6.11 22.40 2228 2228 MS2 30/56 Linfeng_091611_rIgG_2.raw High HVDYVADQIVTK IPI:IPI00414101.4 7 1 CID 87.91 4.90 1.00 1 2 694.36084 1387.71440 -5.22 26.18 2753 2753 MS2 20/22 Linfeng_091611_rIgG_2.raw High NSTEcTLILTEGDSAK IPI:IPI00414101.4 7 1 CID C5(Carbamidomethyl) 60.09 4.86 1.00 1 3 580.27539 1738.81162 -2.78 30.78 3370 3370 MS2 27/60 Linfeng_091611_rIgG_2.raw High KEWLLGmLGAESAK IPI:IPI00414101.4 7 1 CID M7(Oxidation) 51.69 4.84 1.00 1 3 516.93909 1548.80271 -4.15 34.94 3986 3986 MS2 30/52 Linfeng_091811_SIN3A_2.raw High LmDGEEPLPmLPSYK IPI:IPI00414101.4 7 1 CID "M2(Oxidation), M10(Oxidation)" 98.85 4.81 1.00 1 2 876.41138 1751.81548 -4.37 34.78 3883 3883 MS2 20/28 Linfeng_091611_rIgG_2.raw High TLAVSGLGVVGR IPI:IPI00414101.4 7 1 CID 66.90 4.79 1.00 1 2 564.83826 1128.66924 -3.87 33.39 3827 3827 MS2 18/22 Linfeng_091811_SIN3A_3.raw High HVDYVADQIVTK IPI:IPI00953508.1 7 1 CID 108.35 4.79 1.00 1 2 694.36279 1387.71831 -2.41 28.94 5867 5867 MS2 20/22 Linfeng_081211_IgG_3.raw High mQSLDKDIVALMVR IPI:IPI00414101.4 7 1 CID M1(Oxidation) 58.61 4.78 1.00 1 3 545.62360 1634.85624 -2.62 40.28 4683 4683 MS2 29/52 Linfeng_091811_SIN3A_2.raw High NSTEcTLILTEGDSAK IPI:IPI00414101.4 7 1 CID C5(Carbamidomethyl) 42.87 4.78 1.00 1 3 580.27448 1738.80887 -4.36 31.00 3465 3465 MS2 28/60 Linfeng_091811_SIN3A_2.raw High EDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 51.07 4.76 1.00 1 3 602.97205 1806.90158 0.41 54.38 6401 6401 MS2 33/60 Linfeng_091811_SIN3A_3.raw High HVDYVADQIVTK IPI:IPI00414101.4 7 1 CID 89.68 4.73 1.00 1 2 694.35999 1387.71269 -6.45 26.42 2841 2841 MS2 20/22 Linfeng_091811_SIN3A_2.raw High NENTEGSPQEDGVELEGLK IPI:IPI00953508.1 7 1 CID 93.58 4.72 1.00 1 3 682.31677 2044.93576 2.50 32.42 6450 6450 MS2 27/72 Linfeng_081211_IgG_2.raw High GFQQISFVNSIATSK IPI:IPI00414101.4 7 1 CID 59.47 4.71 1.00 1 2 813.92468 1626.84209 -4.04 38.07 3899 3899 MS2 16/28 Linfeng_091611_rIgG_3.raw High SVVSDLEADDVK IPI:IPI00953508.1 7 1 CID 58.61 4.71 1.00 1 2 638.81702 1276.62676 -0.01 33.43 7551 7551 MS2 18/22 Linfeng_081211_IgG_3.raw High mQSLDKDIVALmVR IPI:IPI00414101.4 7 1 CID "M1(Oxidation), M12(Oxidation)" 33.83 4.70 1.00 1 3 550.95496 1650.85031 -3.11 33.71 3825 3825 MS2 24/52 Linfeng_091811_SIN3A_2.raw High mQSLDKDIVALMVR IPI:IPI00414101.4 7 1 CID M1(Oxidation) 49.71 4.68 1.00 1 3 545.62372 1634.85660 -2.40 40.04 4557 4557 MS2 30/52 Linfeng_091611_rIgG_2.raw High EWLLGMLGAESAK IPI:IPI00414101.4 7 1 CID 56.95 4.65 1.00 1 2 702.86224 1404.71721 -1.45 45.21 5211 5211 MS2 19/24 Linfeng_091611_rIgG_2.raw High ImImTDQDQDGSHIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID "M2(Oxidation), M4(Oxidation)" 81.99 4.64 1.00 1 3 588.60010 1763.78574 -4.66 22.66 2317 2317 MS2 32/56 Linfeng_091811_SIN3A_2.raw High IFDEILVNAADNK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 66.27 4.63 1.00 1 2 731.38037 1461.75347 -3.42 38.18 4412 4412 MS2 20/24 Linfeng_091811_SIN3A_2.raw High IFDEILVNAADNK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID 56.72 4.61 1.00 1 2 731.38129 1461.75530 -2.16 37.91 4284 4284 MS2 19/24 Linfeng_091611_rIgG_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 44.85 4.59 1.00 1 2 731.38397 1461.76067 1.51 38.18 8778 8778 MS2 19/24 Linfeng_081211_IgG_10.raw High TLAVSGLGVVGR IPI:IPI00414101.4 7 1 CID 56.91 4.58 1.00 1 2 564.83801 1128.66875 -4.30 33.40 3784 3784 MS2 20/22 Linfeng_091811_SIN3A_2.raw High NSTEcTLILTEGDSAK IPI:IPI00953508.1 7 1 CID C5(Carbamidomethyl) 67.12 4.58 1.00 1 2 869.90948 1738.81169 -2.73 32.11 7046 7046 MS2 16/30 Linfeng_081211_IgG_3.raw High TLAVSGLGVVGR IPI:IPI00414101.4 7 1 CID 57.96 4.58 1.00 1 2 564.83759 1128.66789 -5.06 33.18 3678 3678 MS2 20/22 Linfeng_091611_rIgG_2.raw High TLAVSGLGVVGR IPI:IPI00414101.4 7 1 CID 61.81 4.57 1.00 1 2 564.83838 1128.66948 -3.65 33.19 3281 3281 MS2 19/22 Linfeng_091611_rIgG_3.raw High KEWLTNFMEDR IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 38.19 4.51 1.00 1 3 490.23312 1468.68482 -2.85 36.91 4246 4246 MS2 24/40 Linfeng_091811_SIN3A_2.raw High IKNENTEGSPQEDGVELEGLK IPI:IPI00953508.1 7 1 CID 38.85 4.44 1.00 1 3 762.70691 2286.10617 -1.54 30.28 6377 6377 MS2 24/80 Linfeng_081211_IgG_3.raw High GLLINFIHHNWPSLLR IPI:IPI00414101.4 7 1 CID 77.15 4.43 1.00 1 3 644.02991 1930.07517 -3.06 45.77 5384 5384 MS2 26/60 Linfeng_091811_SIN3A_2.raw High KSPSDLWKEDLATFIEELEAVEAK IPI:IPI00414101.4 7 1 CID 46.53 4.40 1.00 1 4 687.85699 2748.40615 2.98 54.63 6450 6450 MS2 37/138 Linfeng_091811_SIN3A_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 44.28 4.39 1.00 1 2 731.38293 1461.75859 0.09 38.54 8799 8799 MS2 18/24 Linfeng_081211_IgG_4.raw High EWLLGmLGAESAK IPI:IPI00414101.4 7 1 CID M6(Oxidation) 38.47 4.34 1.00 1 2 710.85883 1420.71037 -2.67 40.19 4576 4576 MS2 20/24 Linfeng_091611_rIgG_2.raw High DPALNSGVSQKPDPAK IPI:IPI00414101.4 7 1 CID 70.40 4.31 1.00 1 3 541.94763 1623.82834 -3.34 20.64 2039 2039 MS2 27/60 Linfeng_091811_SIN3A_2.raw High MQSLDKDIVALMVR IPI:IPI00414101.4 7 1 CID 34.97 4.29 1.00 1 3 540.29156 1618.86014 -3.38 42.10 4919 4919 MS2 29/52 Linfeng_091811_SIN3A_2.raw High GFQQISFVNSIATSK IPI:IPI00953508.1 7 1 CID 67.99 4.29 1.00 1 2 813.92834 1626.84941 0.46 39.52 9681 9681 MS2 17/28 Linfeng_081211_IgG_3.raw High ImImTDQDQDGSHIK IPI:IPI00217709.1;IPI:IPI00414101.4 12 2 CID "M2(Oxidation), M4(Oxidation)" 77.34 4.28 1.00 1 2 882.39746 1763.78765 -3.58 22.56 2250 2250 MS2 19/28 Linfeng_091611_rIgG_2.raw High HVDYVADQIVTK IPI:IPI00953508.1 7 1 CID 60.73 4.25 1.00 1 2 694.36481 1387.72234 0.49 31.64 6239 6239 MS2 17/22 Linfeng_081211_IgG_2.raw High NSTEcTLILTEGDSAK IPI:IPI00953508.1 7 1 CID C5(Carbamidomethyl) 15.56 4.23 1.00 1 3 580.27576 1738.81272 -2.14 32.38 6440 6440 MS2 20/60 Linfeng_081211_IgG_2.raw High DPALNSGVSQKPDPAK IPI:IPI00414101.4 7 1 CID 92.35 4.23 1.00 1 2 812.41919 1623.83110 -1.64 20.48 1961 1961 MS2 20/30 Linfeng_091611_rIgG_2.raw High QImENAEINNIIK IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID M3(Oxidation) 48.44 4.18 1.00 1 2 773.39838 1545.78948 -3.05 32.55 3671 3671 MS2 18/24 Linfeng_091811_SIN3A_2.raw High EWLLGmLGAESAK IPI:IPI00414101.4 7 1 CID M6(Oxidation) 48.96 4.16 1.00 1 2 710.85907 1420.71086 -2.33 40.41 4700 4700 MS2 20/24 Linfeng_091811_SIN3A_2.raw High YSGPEDDAAISLAFSK IPI:IPI00953508.1 7 1 CID 85.01 4.14 1.00 1 2 835.90002 1670.79277 1.13 44.36 7484 7484 MS2 16/30 Linfeng_081211_IgG_1.raw High ELILFSNSDNER IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 75.09 4.13 1.00 1 2 718.85449 1436.70171 0.03 37.43 8986 8986 MS2 19/22 Linfeng_081211_IgG_3.raw High EWLLGMLGAESAK IPI:IPI00414101.4 7 1 CID 10.52 4.13 1.00 1 2 702.86163 1404.71599 -2.32 45.47 5346 5346 MS2 19/24 Linfeng_091811_SIN3A_2.raw High SVVSDLEADDVK IPI:IPI00414101.4 7 1 CID 59.86 4.11 1.00 1 2 638.81445 1276.62163 -4.03 32.21 3626 3626 MS2 19/22 Linfeng_091811_SIN3A_2.raw High ELILFSNSDNER IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 28.45 4.11 1.00 1 2 718.85156 1436.69585 -4.05 36.11 4142 4142 MS2 19/22 Linfeng_091811_SIN3A_2.raw High ELILFSNSDNER IPI:IPI00414101.4;IPI:IPI00925477.1 12 2 CID 61.69 4.08 1.00 1 2 718.85236 1436.69744 -2.94 36.27 4163 4163 MS2 19/22 Linfeng_091811_SIN3A_2.raw High TLAVSGLGVVGR IPI:IPI00953508.1 7 1 CID 27.38 4.08 1.00 1 2 564.84027 1128.67327 -0.30 42.68 6982 6982 MS2 16/22 Linfeng_081211_IgG_1.raw High SVVSDLEADDVK IPI:IPI00414101.4 7 1 CID 61.15 4.07 1.00 1 2 638.81500 1276.62273 -3.17 31.99 3525 3525 MS2 19/22 Linfeng_091611_rIgG_2.raw High YSGPEDDAAISLAFSK IPI:IPI00953508.1 7 1 CID 62.80 3.94 1.00 1 2 835.90039 1670.79350 1.57 38.16 9245 9245 MS2 14/30 Linfeng_081211_IgG_3.raw High TLAVSGLGVVGR IPI:IPI00953508.1 7 1 CID 70.88 3.87 1.00 1 2 564.83966 1128.67204 -1.38 34.56 7974 7974 MS2 20/22 Linfeng_081211_IgG_3.raw High LDDANDAGGR IPI:IPI00953508.1 7 1 CID 62.81 3.83 1.00 1 2 502.22427 1003.44127 -2.71 16.01 1603 1603 MS2 14/18 Linfeng_081211_IgG_2.raw High SVVSDLEADDVK IPI:IPI00953508.1 7 1 CID 44.23 3.81 1.00 1 2 638.81696 1276.62663 -0.11 32.60 6931 6931 MS2 15/22 Linfeng_081211_IgG_4.raw High ELILFSNSDNER IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 68.68 3.77 1.00 1 2 718.85547 1436.70366 1.39 38.09 8068 8068 MS2 18/22 Linfeng_081211_IgG_2.raw High TLAVSGLGVVGR IPI:IPI00953508.1 7 1 CID 56.37 3.73 1.00 1 2 564.84082 1128.67436 0.68 35.35 7276 7276 MS2 20/22 Linfeng_081211_IgG_2.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 54.59 3.71 1.00 1 2 731.38336 1461.75945 0.67 39.20 9583 9583 MS2 17/24 Linfeng_081211_IgG_3.raw High NENTEGSPQEDGVELEGLK IPI:IPI00953508.1 7 1 CID 31.21 3.69 1.00 1 2 1022.96924 2044.93120 0.27 32.35 6432 6432 MS2 16/36 Linfeng_081211_IgG_2.raw High RAYDIAGSTK IPI:IPI00953508.1 7 1 CID 29.02 3.62 1.00 1 2 541.28497 1081.56267 -0.94 20.62 3131 3131 MS2 14/18 Linfeng_081211_IgG_3.raw High IFDEILVNAADNK IPI:IPI00925477.1;IPI:IPI00953508.1 12 2 CID 43.22 3.54 1.00 1 2 731.38342 1461.75957 0.76 39.61 8497 8497 MS2 20/24 Linfeng_081211_IgG_2.raw High NSTEcTLILTEGDSAK IPI:IPI00953508.1 7 1 CID C5(Carbamidomethyl) 60.00 3.53 1.00 1 2 869.91376 1738.82024 2.18 31.32 6523 6523 MS2 13/30 Linfeng_081211_IgG_4.raw High SVVSDLEADDVK IPI:IPI00953508.1 7 1 CID 46.17 3.46 1.00 1 2 638.81671 1276.62615 -0.49 33.77 6839 6839 MS2 14/22 Linfeng_081211_IgG_2.raw IPI:IPI00081836.3 128 13.9 10.89 Histone H2A type 1-H 30.47 80 4 363.79 21.88 27 2 229.53 17.97 28 2 199.11 23.44 25 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 81.33 6.05 1.00 1 2 966.08673 1931.16619 -1.41 46.05 5316 5316 MS2 19/36 Linfeng_091611_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 119.43 5.96 1.00 1 2 966.08807 1931.16887 -0.02 45.85 11136 11136 MS2 22/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 122.07 5.89 1.00 1 2 966.08636 1931.16545 -1.79 45.77 5034 5034 MS2 22/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 94.99 5.85 1.00 1 2 966.08722 1931.16716 -0.91 47.10 5200 5200 MS2 21/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 100.67 5.83 1.00 1 2 966.08600 1931.16472 -2.17 45.99 5530 5530 MS2 20/36 Linfeng_091611_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 99.09 5.82 1.00 1 2 966.08423 1931.16118 -4.00 46.03 5256 5256 MS2 21/36 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 90.38 5.82 1.00 1 2 966.09100 1931.17473 3.01 46.86 11398 11398 MS2 22/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 67.18 5.81 1.00 1 2 966.08606 1931.16484 -2.11 45.88 5330 5330 MS2 18/36 Linfeng_091611_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 91.20 5.80 1.00 1 2 966.08728 1931.16728 -0.84 45.91 5604 5604 MS2 20/36 Linfeng_091611_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 85.08 5.74 1.00 1 2 966.08710 1931.16692 -1.03 46.02 5303 5303 MS2 21/36 Linfeng_091611_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 78.67 5.73 1.00 1 2 966.08698 1931.16667 -1.16 46.37 5674 5674 MS2 18/36 Linfeng_091811_SIN3A_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 89.95 5.71 1.00 1 2 966.08630 1931.16533 -1.85 46.38 5389 5389 MS2 18/36 Linfeng_091811_SIN3A_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 94.86 5.70 1.00 1 2 966.08514 1931.16301 -3.06 46.41 5339 5339 MS2 21/36 Linfeng_091811_SIN3A_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 68.35 5.69 1.00 1 2 966.08594 1931.16460 -2.23 46.36 5489 5489 MS2 19/36 Linfeng_091811_SIN3A_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 116.06 5.66 1.00 1 3 644.39435 1931.16849 -0.22 46.27 5513 5513 MS2 33/72 Linfeng_091811_SIN3A_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 116.60 5.63 1.00 1 3 644.39288 1931.16410 -2.49 45.89 5517 5517 MS2 32/72 Linfeng_091611_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 111.88 5.61 1.00 1 3 644.39276 1931.16373 -2.68 45.90 4894 4894 MS2 31/72 Linfeng_091611_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 105.29 5.58 1.00 1 2 966.09064 1931.17400 2.63 47.88 11626 11626 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 97.69 5.58 1.00 1 3 644.39368 1931.16648 -1.26 46.21 5440 5440 MS2 29/72 Linfeng_091811_SIN3A_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 72.60 5.56 1.00 1 2 966.08765 1931.16802 -0.46 45.95 5385 5385 MS2 20/36 Linfeng_091611_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 70.61 5.55 1.00 1 2 966.08563 1931.16399 -2.55 46.00 5471 5471 MS2 19/36 Linfeng_091611_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 63.98 5.51 1.00 1 2 966.08423 1931.16118 -4.00 45.95 4900 4900 MS2 18/36 Linfeng_091611_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 95.05 5.49 1.00 1 2 966.08679 1931.16631 -1.35 46.10 5454 5454 MS2 20/36 Linfeng_091811_SIN3A_1.raw High LLGKVTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 8 1 CID 32.99 5.46 1.00 1 3 781.48816 2342.44992 -1.52 44.72 4903 4903 MS2 25/88 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 83.07 5.45 1.00 1 3 644.39520 1931.17105 1.11 46.66 11292 11292 MS2 30/72 Linfeng_081211_IgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 132.56 5.32 1.00 1 3 644.39270 1931.16355 -2.78 46.29 5325 5325 MS2 32/72 Linfeng_091811_SIN3A_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 100.37 5.28 1.00 1 3 644.39380 1931.16684 -1.07 46.00 5310 5310 MS2 27/72 Linfeng_091611_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 72.81 5.27 1.00 1 2 966.08569 1931.16411 -2.49 46.41 5278 5278 MS2 18/36 Linfeng_091811_SIN3A_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 86.87 5.26 1.00 1 2 966.08813 1931.16899 0.04 46.23 5476 5476 MS2 14/36 Linfeng_091811_SIN3A_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 77.91 5.26 1.00 1 2 966.08838 1931.16948 0.30 48.98 11864 11864 MS2 19/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 105.02 5.26 1.00 1 3 644.39331 1931.16538 -1.83 45.91 5289 5289 MS2 32/72 Linfeng_091611_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 98.61 5.22 1.00 1 3 644.39209 1931.16172 -3.73 45.76 5315 5315 MS2 31/72 Linfeng_091611_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 111.01 5.20 1.00 1 3 644.39331 1931.16538 -1.83 45.66 5021 5021 MS2 32/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 122.40 5.17 1.00 1 3 644.39288 1931.16410 -2.49 45.91 5473 5473 MS2 31/72 Linfeng_091611_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 104.23 5.15 1.00 1 2 966.09155 1931.17583 3.58 51.01 12239 12239 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 72.76 5.12 1.00 1 3 644.39648 1931.17490 3.10 53.49 5973 5973 MS2 23/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 94.66 5.05 1.00 1 3 644.39404 1931.16758 -0.69 46.30 5665 5665 MS2 32/72 Linfeng_091811_SIN3A_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 46.39 5.04 1.00 1 3 644.39502 1931.17051 0.83 54.24 6189 6189 MS2 28/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 145.74 5.03 1.00 1 3 644.39301 1931.16446 -2.30 45.86 5597 5597 MS2 33/72 Linfeng_091611_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 119.62 5.02 1.00 1 3 644.39154 1931.16007 -4.58 47.38 5424 5424 MS2 31/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 98.28 5.00 1.00 1 3 644.39410 1931.16776 -0.60 50.62 5635 5635 MS2 32/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 102.53 4.99 1.00 1 3 644.39386 1931.16703 -0.98 47.09 5199 5199 MS2 31/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 119.98 4.98 1.00 1 3 644.39441 1931.16867 -0.12 46.34 5268 5268 MS2 33/72 Linfeng_091811_SIN3A_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 78.47 4.98 1.00 1 2 966.08875 1931.17021 0.67 45.81 10769 10769 MS2 18/36 Linfeng_081211_IgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 97.55 4.97 1.00 1 3 644.39319 1931.16501 -2.02 46.08 5451 5451 MS2 32/72 Linfeng_091811_SIN3A_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 101.19 4.97 1.00 1 3 644.39337 1931.16556 -1.73 46.26 5373 5373 MS2 31/72 Linfeng_091811_SIN3A_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 112.68 4.96 1.00 1 3 644.39606 1931.17362 2.44 52.96 12540 12540 MS2 28/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 128.04 4.96 1.00 1 3 644.39484 1931.16996 0.54 48.16 5332 5332 MS2 31/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 73.25 4.93 1.00 1 2 966.08710 1931.16692 -1.03 52.57 5874 5874 MS2 14/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 111.13 4.90 1.00 1 3 644.39288 1931.16410 -2.49 46.01 5254 5254 MS2 30/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 69.71 4.88 1.00 1 2 966.09113 1931.17497 3.14 50.00 12060 12060 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 45.53 4.86 1.00 1 3 644.39343 1931.16574 -1.64 51.13 5872 5872 MS2 25/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 112.89 4.85 1.00 1 3 644.39417 1931.16794 -0.50 45.87 5375 5375 MS2 31/72 Linfeng_091611_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 131.23 4.83 1.00 1 3 644.39343 1931.16574 -1.64 46.28 5479 5479 MS2 32/72 Linfeng_091811_SIN3A_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 104.02 4.81 1.00 1 3 644.39307 1931.16465 -2.21 45.96 5466 5466 MS2 32/72 Linfeng_091611_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 86.01 4.81 1.00 1 3 644.39380 1931.16684 -1.07 49.43 5490 5490 MS2 25/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 101.99 4.76 1.00 1 3 644.39648 1931.17490 3.10 46.87 11403 11403 MS2 29/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 116.62 4.76 1.00 1 3 644.39581 1931.17289 2.06 47.89 11629 11629 MS2 30/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 69.56 4.73 1.00 1 3 644.39398 1931.16739 -0.79 47.69 11524 11524 MS2 24/72 Linfeng_081211_IgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 104.27 4.68 1.00 1 3 644.39539 1931.17160 1.39 45.87 11143 11143 MS2 31/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 54.69 4.62 1.00 1 2 966.08679 1931.16631 -1.35 49.92 5549 5549 MS2 15/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 55.73 4.59 1.00 1 2 966.08789 1931.16850 -0.21 46.67 11297 11297 MS2 17/36 Linfeng_081211_IgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 29.72 4.58 1.00 1 3 644.39447 1931.16886 -0.03 54.99 12905 12905 MS2 20/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 104.63 4.52 1.00 1 4 483.54639 1931.16372 -2.69 46.16 5272 5272 MS2 45/108 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 74.61 4.49 1.00 1 3 644.39307 1931.16465 -2.21 46.09 5459 5459 MS2 26/72 Linfeng_091811_SIN3A_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 115.58 4.47 1.00 1 3 644.39520 1931.17105 1.11 52.13 5991 5991 MS2 29/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 80.47 4.38 1.00 1 3 644.39313 1931.16483 -2.11 47.00 5378 5378 MS2 30/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 62.04 4.27 1.00 1 3 644.39563 1931.17234 1.77 45.93 11320 11320 MS2 25/72 Linfeng_081211_IgG_7.raw High NDEELNKLLGK IPI:IPI00930144.1 9 1 CID 61.06 4.26 1.00 1 2 636.84015 1272.67302 -5.07 31.77 3432 3432 MS2 17/20 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 72.30 4.25 1.00 1 3 644.39453 1931.16904 0.07 45.78 10761 10761 MS2 22/72 Linfeng_081211_IgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 98.04 4.19 1.00 1 3 644.39667 1931.17545 3.39 48.91 11845 11845 MS2 27/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 49.39 4.19 1.00 1 3 644.39490 1931.17014 0.64 40.29 9517 9517 MS2 24/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 87.66 4.14 1.00 1 3 644.39557 1931.17215 1.68 50.94 12225 12225 MS2 24/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 49.80 4.13 1.00 1 3 644.39575 1931.17270 1.96 53.97 12677 12677 MS2 28/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 33.34 3.93 1.00 1 2 966.08923 1931.17119 1.18 53.03 12552 12552 MS2 16/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 62.59 3.86 1.00 1 2 966.08856 1931.16985 0.48 52.02 12407 12407 MS2 19/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 40.25 3.71 1.00 1 2 966.09003 1931.17278 2.00 46.66 11401 11401 MS2 12/36 Linfeng_081211_IgG_6.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 44.14 3.53 1.00 1 2 472.76935 944.53142 0.15 33.07 7089 7089 MS2 13/16 Linfeng_081211_IgG_10.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 50.13 3.48 1.00 1 2 472.76831 944.52934 -2.05 32.00 6788 6788 MS2 13/16 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 15.59 3.47 1.00 1 2 966.08997 1931.17266 1.94 44.84 10933 10933 MS2 14/36 Linfeng_081211_IgG_10.raw IPI:IPI00171196.2 420 45.8 4.88 "Isoform 3 of Keratin, type I cytoskeletal 13" 8.10 49 4 344.19 8.10 27 4 201.46 5.48 11 2 155.49 5.48 11 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 59.85 4.85 1.00 1 2 651.32947 1301.65166 -5.19 27.27 2960 2960 MS2 18/22 Linfeng_091811_SIN3A_2.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.27 4.75 1.00 1 2 651.32880 1301.65032 -6.22 27.15 2979 2979 MS2 19/22 Linfeng_091811_SIN3A_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.33 4.68 1.00 1 2 651.33307 1301.65886 0.35 34.79 5016 5016 MS2 18/22 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 68.05 4.68 1.00 1 2 651.33020 1301.65312 -4.06 27.17 2879 2879 MS2 18/22 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 72.33 4.66 1.00 1 2 651.33154 1301.65581 -2.00 27.07 2659 2659 MS2 18/22 Linfeng_091611_rIgG_10.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 55.69 4.64 1.00 1 2 651.32935 1301.65141 -5.38 27.06 3062 3062 MS2 18/22 Linfeng_091611_rIgG_4.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.47 4.62 1.00 1 2 651.33142 1301.65557 -2.19 27.48 5414 5414 MS2 19/22 Linfeng_081211_IgG_8.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 55.88 4.60 1.00 1 2 651.32861 1301.64995 -6.50 27.34 2804 2804 MS2 18/22 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 64.41 4.59 1.00 1 2 651.32947 1301.65166 -5.19 27.18 2962 2962 MS2 18/22 Linfeng_091611_rIgG_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 61.79 4.59 1.00 1 2 651.32855 1301.64983 -6.59 27.44 2939 2939 MS2 18/22 Linfeng_091811_SIN3A_9.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 56.82 4.57 1.00 1 2 651.32880 1301.65032 -6.22 27.21 2997 2997 MS2 19/22 Linfeng_091811_SIN3A_3.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 54.13 4.57 1.00 1 2 651.32971 1301.65215 -4.81 27.08 2872 2872 MS2 19/22 Linfeng_091611_rIgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 58.13 4.56 1.00 1 2 651.32935 1301.65141 -5.38 27.12 2881 2881 MS2 19/22 Linfeng_091611_rIgG_2.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 59.69 4.55 1.00 1 2 651.33038 1301.65349 -3.78 27.24 3053 3053 MS2 18/22 Linfeng_091611_rIgG_5.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 70.10 4.54 1.00 1 2 651.32886 1301.65044 -6.13 27.42 2839 2839 MS2 17/22 Linfeng_091811_SIN3A_10.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.45 4.53 1.00 1 2 651.33209 1301.65691 -1.15 29.01 5430 5430 MS2 18/22 Linfeng_081211_IgG_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 64.92 4.53 1.00 1 2 651.33112 1301.65495 -2.66 27.98 5347 5347 MS2 18/22 Linfeng_081211_IgG_7.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.19 4.50 1.00 1 2 651.33142 1301.65557 -2.19 28.01 5221 5221 MS2 17/22 Linfeng_081211_IgG_5.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 65.34 4.48 1.00 1 2 651.32990 1301.65251 -4.53 27.36 3043 3043 MS2 17/22 Linfeng_091611_rIgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 71.18 4.47 1.00 1 2 651.33154 1301.65581 -2.00 32.77 4658 4658 MS2 18/22 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 62.31 4.45 1.00 1 2 651.32990 1301.65251 -4.53 27.07 2497 2497 MS2 18/22 Linfeng_091611_rIgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 53.96 4.45 1.00 1 2 651.33258 1301.65788 -0.40 27.71 5349 5349 MS2 17/22 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 63.91 4.45 1.00 1 2 651.33215 1301.65703 -1.06 35.90 5221 5221 MS2 17/22 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 57.77 4.42 1.00 1 2 651.32886 1301.65044 -6.13 27.38 3031 3031 MS2 17/22 Linfeng_091811_SIN3A_6.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 42.31 4.40 1.00 1 2 690.36438 1379.72148 -4.58 28.45 3298 3298 MS2 17/20 Linfeng_091811_SIN3A_5.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 69.36 4.40 1.00 1 2 651.33057 1301.65386 -3.50 27.30 3174 3174 MS2 17/22 Linfeng_091611_rIgG_8.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.14 4.38 1.00 1 2 651.33130 1301.65532 -2.37 33.79 4838 4838 MS2 18/22 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.06 4.35 1.00 1 2 651.32880 1301.65032 -6.22 27.36 3047 3047 MS2 17/22 Linfeng_091811_SIN3A_4.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.62 4.32 1.00 1 2 651.33185 1301.65642 -1.53 29.74 6175 6175 MS2 17/22 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 55.03 4.31 1.00 1 2 651.33197 1301.65666 -1.34 27.87 5345 5345 MS2 17/22 Linfeng_081211_IgG_4.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 51.90 4.31 1.00 1 2 690.36426 1379.72124 -4.76 28.32 3137 3137 MS2 17/20 Linfeng_091811_SIN3A_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 47.82 4.29 1.00 1 2 690.36652 1379.72576 -1.48 29.08 5745 5745 MS2 17/20 Linfeng_081211_IgG_4.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 66.16 4.27 1.00 1 2 651.32928 1301.65129 -5.47 27.30 3140 3140 MS2 18/22 Linfeng_091811_SIN3A_5.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 50.42 4.25 1.00 1 2 690.36621 1379.72515 -1.93 28.87 5534 5534 MS2 17/20 Linfeng_081211_IgG_5.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.49 4.23 1.00 1 2 651.33057 1301.65386 -3.50 28.73 5689 5689 MS2 17/22 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 61.32 4.19 1.00 1 2 651.33191 1301.65654 -1.44 27.72 5362 5362 MS2 17/22 Linfeng_081211_IgG_10.raw High TRLEQEIATYR IPI:IPI00217963.3 14 1 CID 48.03 4.14 1.00 1 2 690.36597 1379.72466 -2.28 28.26 3027 3027 MS2 17/20 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.19 4.08 1.00 1 2 651.33221 1301.65715 -0.97 28.68 5801 5801 MS2 17/22 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 24.43 4.03 1.00 1 2 651.33356 1301.65984 1.10 30.13 5992 5992 MS2 14/22 Linfeng_081211_IgG_5.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 50.83 3.95 1.00 1 2 561.79205 1122.57683 -1.93 26.79 5244 5244 MS2 15/16 Linfeng_081211_IgG_3.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 51.34 3.88 1.00 1 2 690.36676 1379.72624 -1.13 28.80 5712 5712 MS2 15/20 Linfeng_081211_IgG_10.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 69.75 3.86 1.00 1 2 651.33069 1301.65410 -3.31 29.71 4787 4787 MS2 16/22 Linfeng_081211_IgG_9.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 36.86 3.86 1.00 1 2 651.33319 1301.65911 0.53 31.52 4413 4413 MS2 16/22 Linfeng_081211_IgG_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 41.49 3.86 1.00 1 2 690.36737 1379.72746 -0.24 30.27 6201 6201 MS2 11/20 Linfeng_081211_IgG_6.raw High QSVEADINGLR IPI:IPI00009865.4;IPI:IPI00171196.2 6 2 CID 63.67 3.72 1.00 1 2 601.31232 1201.61736 0.13 31.50 6182 6182 MS2 15/20 Linfeng_081211_IgG_2.raw High QSVEADINGLR IPI:IPI00009865.4;IPI:IPI00171196.2 6 2 CID 43.89 3.70 1.00 1 2 601.31116 1201.61504 -1.80 39.28 5987 5987 MS2 17/20 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 52.13 3.60 1.00 1 2 561.79163 1122.57598 -2.70 31.59 4423 4423 MS2 15/16 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 56.04 3.53 1.00 1 2 561.79254 1122.57781 -1.06 25.49 4862 4862 MS2 15/16 Linfeng_081211_IgG_8.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 38.64 3.48 1.00 1 2 561.79089 1122.57451 -4.00 25.80 4846 4846 MS2 15/16 Linfeng_081211_IgG_10.raw IPI:IPI00026272.2 130 14.1 11.05 Histone H2A type 1-B/E 30.00 80 4 354.17 30.00 28 3 226.28 17.69 28 2 195.97 14.62 24 1 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 81.33 6.05 1.00 1 2 966.08673 1931.16619 -1.41 46.05 5316 5316 MS2 19/36 Linfeng_091611_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 119.43 5.96 1.00 1 2 966.08807 1931.16887 -0.02 45.85 11136 11136 MS2 22/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 122.07 5.89 1.00 1 2 966.08636 1931.16545 -1.79 45.77 5034 5034 MS2 22/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 94.99 5.85 1.00 1 2 966.08722 1931.16716 -0.91 47.10 5200 5200 MS2 21/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 100.67 5.83 1.00 1 2 966.08600 1931.16472 -2.17 45.99 5530 5530 MS2 20/36 Linfeng_091611_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 99.09 5.82 1.00 1 2 966.08423 1931.16118 -4.00 46.03 5256 5256 MS2 21/36 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 90.38 5.82 1.00 1 2 966.09100 1931.17473 3.01 46.86 11398 11398 MS2 22/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 67.18 5.81 1.00 1 2 966.08606 1931.16484 -2.11 45.88 5330 5330 MS2 18/36 Linfeng_091611_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 91.20 5.80 1.00 1 2 966.08728 1931.16728 -0.84 45.91 5604 5604 MS2 20/36 Linfeng_091611_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 85.08 5.74 1.00 1 2 966.08710 1931.16692 -1.03 46.02 5303 5303 MS2 21/36 Linfeng_091611_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 78.67 5.73 1.00 1 2 966.08698 1931.16667 -1.16 46.37 5674 5674 MS2 18/36 Linfeng_091811_SIN3A_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 89.95 5.71 1.00 1 2 966.08630 1931.16533 -1.85 46.38 5389 5389 MS2 18/36 Linfeng_091811_SIN3A_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 94.86 5.70 1.00 1 2 966.08514 1931.16301 -3.06 46.41 5339 5339 MS2 21/36 Linfeng_091811_SIN3A_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 68.35 5.69 1.00 1 2 966.08594 1931.16460 -2.23 46.36 5489 5489 MS2 19/36 Linfeng_091811_SIN3A_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 116.06 5.66 1.00 1 3 644.39435 1931.16849 -0.22 46.27 5513 5513 MS2 33/72 Linfeng_091811_SIN3A_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 116.60 5.63 1.00 1 3 644.39288 1931.16410 -2.49 45.89 5517 5517 MS2 32/72 Linfeng_091611_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 111.88 5.61 1.00 1 3 644.39276 1931.16373 -2.68 45.90 4894 4894 MS2 31/72 Linfeng_091611_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 105.29 5.58 1.00 1 2 966.09064 1931.17400 2.63 47.88 11626 11626 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 97.69 5.58 1.00 1 3 644.39368 1931.16648 -1.26 46.21 5440 5440 MS2 29/72 Linfeng_091811_SIN3A_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 72.60 5.56 1.00 1 2 966.08765 1931.16802 -0.46 45.95 5385 5385 MS2 20/36 Linfeng_091611_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 70.61 5.55 1.00 1 2 966.08563 1931.16399 -2.55 46.00 5471 5471 MS2 19/36 Linfeng_091611_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 63.98 5.51 1.00 1 2 966.08423 1931.16118 -4.00 45.95 4900 4900 MS2 18/36 Linfeng_091611_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 95.05 5.49 1.00 1 2 966.08679 1931.16631 -1.35 46.10 5454 5454 MS2 20/36 Linfeng_091811_SIN3A_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 83.07 5.45 1.00 1 3 644.39520 1931.17105 1.11 46.66 11292 11292 MS2 30/72 Linfeng_081211_IgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 132.56 5.32 1.00 1 3 644.39270 1931.16355 -2.78 46.29 5325 5325 MS2 32/72 Linfeng_091811_SIN3A_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 100.37 5.28 1.00 1 3 644.39380 1931.16684 -1.07 46.00 5310 5310 MS2 27/72 Linfeng_091611_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 72.81 5.27 1.00 1 2 966.08569 1931.16411 -2.49 46.41 5278 5278 MS2 18/36 Linfeng_091811_SIN3A_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 86.87 5.26 1.00 1 2 966.08813 1931.16899 0.04 46.23 5476 5476 MS2 14/36 Linfeng_091811_SIN3A_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 77.91 5.26 1.00 1 2 966.08838 1931.16948 0.30 48.98 11864 11864 MS2 19/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 105.02 5.26 1.00 1 3 644.39331 1931.16538 -1.83 45.91 5289 5289 MS2 32/72 Linfeng_091611_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 98.61 5.22 1.00 1 3 644.39209 1931.16172 -3.73 45.76 5315 5315 MS2 31/72 Linfeng_091611_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 111.01 5.20 1.00 1 3 644.39331 1931.16538 -1.83 45.66 5021 5021 MS2 32/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 122.40 5.17 1.00 1 3 644.39288 1931.16410 -2.49 45.91 5473 5473 MS2 31/72 Linfeng_091611_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 104.23 5.15 1.00 1 2 966.09155 1931.17583 3.58 51.01 12239 12239 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 72.76 5.12 1.00 1 3 644.39648 1931.17490 3.10 53.49 5973 5973 MS2 23/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 94.66 5.05 1.00 1 3 644.39404 1931.16758 -0.69 46.30 5665 5665 MS2 32/72 Linfeng_091811_SIN3A_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 46.39 5.04 1.00 1 3 644.39502 1931.17051 0.83 54.24 6189 6189 MS2 28/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 145.74 5.03 1.00 1 3 644.39301 1931.16446 -2.30 45.86 5597 5597 MS2 33/72 Linfeng_091611_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 119.62 5.02 1.00 1 3 644.39154 1931.16007 -4.58 47.38 5424 5424 MS2 31/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 98.28 5.00 1.00 1 3 644.39410 1931.16776 -0.60 50.62 5635 5635 MS2 32/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 102.53 4.99 1.00 1 3 644.39386 1931.16703 -0.98 47.09 5199 5199 MS2 31/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 119.98 4.98 1.00 1 3 644.39441 1931.16867 -0.12 46.34 5268 5268 MS2 33/72 Linfeng_091811_SIN3A_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 78.47 4.98 1.00 1 2 966.08875 1931.17021 0.67 45.81 10769 10769 MS2 18/36 Linfeng_081211_IgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 97.55 4.97 1.00 1 3 644.39319 1931.16501 -2.02 46.08 5451 5451 MS2 32/72 Linfeng_091811_SIN3A_1.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 101.19 4.97 1.00 1 3 644.39337 1931.16556 -1.73 46.26 5373 5373 MS2 31/72 Linfeng_091811_SIN3A_9.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 112.68 4.96 1.00 1 3 644.39606 1931.17362 2.44 52.96 12540 12540 MS2 28/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 128.04 4.96 1.00 1 3 644.39484 1931.16996 0.54 48.16 5332 5332 MS2 31/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 73.25 4.93 1.00 1 2 966.08710 1931.16692 -1.03 52.57 5874 5874 MS2 14/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 111.13 4.90 1.00 1 3 644.39288 1931.16410 -2.49 46.01 5254 5254 MS2 30/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 69.71 4.88 1.00 1 2 966.09113 1931.17497 3.14 50.00 12060 12060 MS2 21/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 45.53 4.86 1.00 1 3 644.39343 1931.16574 -1.64 51.13 5872 5872 MS2 25/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 112.89 4.85 1.00 1 3 644.39417 1931.16794 -0.50 45.87 5375 5375 MS2 31/72 Linfeng_091611_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 131.23 4.83 1.00 1 3 644.39343 1931.16574 -1.64 46.28 5479 5479 MS2 32/72 Linfeng_091811_SIN3A_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 104.02 4.81 1.00 1 3 644.39307 1931.16465 -2.21 45.96 5466 5466 MS2 32/72 Linfeng_091611_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 86.01 4.81 1.00 1 3 644.39380 1931.16684 -1.07 49.43 5490 5490 MS2 25/72 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 101.99 4.76 1.00 1 3 644.39648 1931.17490 3.10 46.87 11403 11403 MS2 29/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 116.62 4.76 1.00 1 3 644.39581 1931.17289 2.06 47.89 11629 11629 MS2 30/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 69.56 4.73 1.00 1 3 644.39398 1931.16739 -0.79 47.69 11524 11524 MS2 24/72 Linfeng_081211_IgG_8.raw High LLGRVTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2 3 1 CID 149.55 4.70 1.00 1 3 790.81995 2370.44529 -6.06 49.83 5538 5538 MS2 30/88 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 104.27 4.68 1.00 1 3 644.39539 1931.17160 1.39 45.87 11143 11143 MS2 31/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00026272.2;IPI:IPI00930144.1 11 2 CID 54.69 4.62 1.00 1 2 966.08679 1931.16631 -1.35 49.92 5549 5549 MS2 15/36 Linfeng_091611_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 55.73 4.59 1.00 1 2 966.08789 1931.16850 -0.21 46.67 11297 11297 MS2 17/36 Linfeng_081211_IgG_8.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 29.72 4.58 1.00 1 3 644.39447 1931.16886 -0.03 54.99 12905 12905 MS2 20/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 104.63 4.52 1.00 1 4 483.54639 1931.16372 -2.69 46.16 5272 5272 MS2 45/108 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 74.61 4.49 1.00 1 3 644.39307 1931.16465 -2.21 46.09 5459 5459 MS2 26/72 Linfeng_091811_SIN3A_3.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 115.58 4.47 1.00 1 3 644.39520 1931.17105 1.11 52.13 5991 5991 MS2 29/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00930144.1 11 1 CID 80.47 4.38 1.00 1 3 644.39313 1931.16483 -2.11 47.00 5378 5378 MS2 30/72 Linfeng_091811_SIN3A_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 62.04 4.27 1.00 1 3 644.39563 1931.17234 1.77 45.93 11320 11320 MS2 25/72 Linfeng_081211_IgG_7.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 72.30 4.25 1.00 1 3 644.39453 1931.16904 0.07 45.78 10761 10761 MS2 22/72 Linfeng_081211_IgG_5.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 98.04 4.19 1.00 1 3 644.39667 1931.17545 3.39 48.91 11845 11845 MS2 27/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 49.39 4.19 1.00 1 3 644.39490 1931.17014 0.64 40.29 9517 9517 MS2 24/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 87.66 4.14 1.00 1 3 644.39557 1931.17215 1.68 50.94 12225 12225 MS2 24/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 49.80 4.13 1.00 1 3 644.39575 1931.17270 1.96 53.97 12677 12677 MS2 28/72 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 33.34 3.93 1.00 1 2 966.08923 1931.17119 1.18 53.03 12552 12552 MS2 16/36 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 62.59 3.86 1.00 1 2 966.08856 1931.16985 0.48 52.02 12407 12407 MS2 19/36 Linfeng_081211_IgG_10.raw High NDEELNKLLGR IPI:IPI00216456.5 3 1 CID 70.01 3.77 1.00 1 2 650.84515 1300.68303 -1.99 32.80 6981 6981 MS2 17/20 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 40.25 3.71 1.00 1 2 966.09003 1931.17278 2.00 46.66 11401 11401 MS2 12/36 Linfeng_081211_IgG_6.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 44.14 3.53 1.00 1 2 472.76935 944.53142 0.15 33.07 7089 7089 MS2 13/16 Linfeng_081211_IgG_10.raw High AGLQFPVGR IPI:IPI00216456.5;IPI:IPI00216730.3;IPI:IPI00218448.4 21 3 CID 50.13 3.48 1.00 1 2 472.76831 944.52934 -2.05 32.00 6788 6788 MS2 13/16 Linfeng_081211_IgG_10.raw High VTIAQGGVLPNIQAVLLPK IPI:IPI00216456.5 11 1 CID 15.59 3.47 1.00 1 2 966.08997 1931.17266 1.94 44.84 10933 10933 MS2 14/36 Linfeng_081211_IgG_10.raw IPI:IPI00791156.1 282 30.7 5.08 31 kDa protein 21.99 34 5 419.63 21.99 29 5 185.82 7.45 1 1 220.51 11.70 4 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 147.50 6.06 1.00 1 2 1051.49084 2101.97441 -3.61 31.31 3540 3540 MS2 22/40 Linfeng_091811_SIN3A_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 124.14 5.87 1.00 1 2 1051.49146 2101.97563 -3.03 32.07 7033 7033 MS2 23/40 Linfeng_081211_IgG_3.raw High GQVGGDVNVEMDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 137.37 5.84 1.00 1 2 1043.49573 2085.98418 -1.40 39.69 6113 6113 MS2 21/40 Linfeng_081211_IgG_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 127.98 5.68 1.00 1 2 1051.49072 2101.97417 -3.73 31.35 6561 6561 MS2 20/40 Linfeng_081211_IgG_6.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 119.40 5.52 1.00 1 2 1051.49231 2101.97734 -2.22 31.14 6670 6670 MS2 23/40 Linfeng_081211_IgG_8.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 89.18 5.39 1.00 1 2 1051.49353 2101.97978 -1.06 31.27 6504 6504 MS2 23/40 Linfeng_081211_IgG_4.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 139.02 5.38 1.00 1 2 1051.49341 2101.97954 -1.17 31.50 6431 6431 MS2 26/40 Linfeng_081211_IgG_5.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 64.52 5.27 1.00 1 3 701.33032 2101.97641 -2.66 31.27 3547 3547 MS2 33/80 Linfeng_091811_SIN3A_3.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 73.25 5.06 1.00 1 2 1051.49109 2101.97490 -3.38 31.51 6581 6581 MS2 18/40 Linfeng_081211_IgG_7.raw High GQVGGDVNVEmDAAPGVDLSR 4 0 CID M11(Oxidation) 58.87 4.95 1.00 1 3 701.33124 2101.97916 -1.35 31.21 3417 3417 MS2 28/80 Linfeng_091611_rIgG_9.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 102.72 4.93 1.00 1 3 701.32959 2101.97422 -3.71 31.36 6564 6564 MS2 31/80 Linfeng_081211_IgG_6.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 85.40 4.93 1.00 1 3 701.33124 2101.97916 -1.35 31.18 6684 6684 MS2 28/80 Linfeng_081211_IgG_8.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 42.36 4.86 1.00 1 3 701.33179 2101.98081 -0.57 31.27 6503 6503 MS2 30/80 Linfeng_081211_IgG_4.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 105.74 4.85 1.00 1 2 1051.49426 2101.98125 -0.36 32.32 6424 6424 MS2 19/40 Linfeng_081211_IgG_2.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 52.82 4.74 1.00 1 2 1051.49170 2101.97612 -2.80 35.36 5126 5126 MS2 15/40 Linfeng_081211_IgG_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 69.69 4.68 1.00 1 3 701.33020 2101.97605 -2.83 32.09 7039 7039 MS2 27/80 Linfeng_081211_IgG_3.raw High ALEEANTELEVK IPI:IPI00450768.7;IPI:IPI00791156.1 6 2 CID 55.29 4.39 1.00 1 2 673.34467 1345.68205 -1.91 28.02 5441 5441 MS2 18/22 Linfeng_081211_IgG_6.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 56.21 4.38 1.00 1 3 701.32953 2101.97403 -3.79 31.29 3537 3537 MS2 31/80 Linfeng_091811_SIN3A_1.raw High ALEEANTELEVK 6 0 CID 66.08 4.36 1.00 1 2 673.34277 1345.67827 -4.72 27.51 3168 3168 MS2 18/22 Linfeng_091811_SIN3A_5.raw High ALEEANTELEVK IPI:IPI00450768.7;IPI:IPI00791156.1 6 2 CID 66.32 4.22 1.00 1 2 673.34564 1345.68401 -0.46 29.08 5919 5919 MS2 17/22 Linfeng_081211_IgG_3.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 44.46 3.76 1.00 1 2 515.30029 1029.59331 -0.61 34.85 7148 7148 MS2 15/16 Linfeng_081211_IgG_2.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.79 3.72 1.00 1 2 515.30084 1029.59441 0.45 34.50 7954 7954 MS2 15/16 Linfeng_081211_IgG_3.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 58.85 3.66 1.00 1 2 586.76605 1172.52483 -0.93 40.72 9417 9417 MS2 13/16 Linfeng_081211_IgG_5.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.65 3.66 1.00 1 2 515.30029 1029.59331 -0.61 33.71 7363 7363 MS2 15/16 Linfeng_081211_IgG_7.raw High LSGGLGAGScR IPI:IPI00450768.7;IPI:IPI00791156.1 4 2 CID C10(Carbamidomethyl) 45.50 3.65 1.00 1 2 517.75513 1034.50298 -1.78 20.98 3130 3130 MS2 16/20 Linfeng_081211_IgG_5.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 57.80 3.65 1.00 1 2 586.76624 1172.52519 -0.62 40.82 9661 9661 MS2 13/16 Linfeng_081211_IgG_6.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 47.85 3.63 1.00 1 2 586.76624 1172.52519 -0.62 40.59 9744 9744 MS2 13/16 Linfeng_081211_IgG_8.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 40.56 3.62 1.00 1 2 586.76740 1172.52751 1.36 41.35 10310 10310 MS2 13/16 Linfeng_081211_IgG_3.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 40.97 3.62 1.00 1 2 586.76672 1172.52617 0.21 40.84 9767 9767 MS2 13/16 Linfeng_081211_IgG_7.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 43.56 3.61 1.00 1 2 515.30023 1029.59319 -0.73 42.53 6934 6934 MS2 15/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 37.34 3.57 1.00 1 2 515.29987 1029.59245 -1.44 33.17 7385 7385 MS2 15/16 Linfeng_081211_IgG_8.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 52.16 3.55 1.00 1 2 586.76685 1172.52641 0.42 46.86 8230 8230 MS2 13/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 42.21 3.55 1.00 1 2 515.30115 1029.59502 1.05 36.35 6128 6128 MS2 15/16 Linfeng_081211_IgG_9.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 47.59 3.47 1.00 1 2 515.29950 1029.59172 -2.16 33.58 7207 7207 MS2 15/16 Linfeng_081211_IgG_5.raw IPI:IPI00021405.3 664 74.1 7.02 Isoform A of Lamin-A/C 29.22 47 16 337.12 29.22 31 16 153.66 14.31 8 7 181.69 10.54 8 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High SVGGSGGGSFGDNLVTR 5 0 CID 117.73 5.37 1.00 1 2 783.87665 1566.74602 -3.03 29.73 3370 3370 MS2 20/32 Linfeng_091811_SIN3A_4.raw High mQQQLDEYQELLDIK 10 0 CID M1(Oxidation) 99.96 5.37 1.00 1 2 955.46161 1909.91594 -2.78 40.10 4778 4778 MS2 23/28 Linfeng_091611_rIgG_4.raw High SVGGSGGGSFGDNLVTR IPI:IPI00021405.3 5 1 CID 106.55 5.34 1.00 1 2 783.87805 1566.74883 -1.23 30.95 6618 6618 MS2 20/32 Linfeng_081211_IgG_3.raw High SVGGSGGGSFGDNLVTR 5 0 CID 108.74 5.25 1.00 1 2 783.87646 1566.74565 -3.26 29.41 3380 3380 MS2 20/32 Linfeng_091611_rIgG_4.raw High mQQQLDEYQELLDIK IPI:IPI00021405.3 10 1 CID M1(Oxidation) 86.32 5.24 1.00 1 2 955.46552 1909.92375 1.31 40.16 9308 9308 MS2 19/28 Linfeng_081211_IgG_4.raw High SVGGSGGGSFGDNLVTR 5 0 CID 121.33 5.21 1.00 1 2 783.87701 1566.74675 -2.56 29.54 3315 3315 MS2 19/32 Linfeng_091811_SIN3A_3.raw High mQQQLDEYQELLDIK IPI:IPI00021405.3 10 1 CID M1(Oxidation) 42.42 5.08 1.00 1 2 955.46558 1909.92388 1.38 41.07 10207 10207 MS2 20/28 Linfeng_081211_IgG_3.raw High SVGGSGGGSFGDNLVTR IPI:IPI00021405.3 5 1 CID 77.36 5.00 1.00 1 2 783.87903 1566.75078 0.01 30.17 6108 6108 MS2 18/32 Linfeng_081211_IgG_4.raw High NSNLVGAAHEELQQSR IPI:IPI00021405.3 10 1 CID 103.17 4.93 1.00 1 2 876.93378 1752.86028 -1.22 29.22 5972 5972 MS2 18/30 Linfeng_081211_IgG_3.raw High IDSLSAQLSQLQK 10 0 CID 55.99 4.80 1.00 1 2 715.89429 1430.78130 -2.58 35.42 4111 4111 MS2 19/24 Linfeng_091811_SIN3A_4.raw High SGAQASSTPLSPTR 6 0 CID 59.19 4.73 1.00 1 2 680.34540 1359.68352 -2.08 21.03 2133 2133 MS2 17/26 Linfeng_091811_SIN3A_3.raw High NSNLVGAAHEELQQSR IPI:IPI00021405.3 10 1 CID 114.61 4.72 1.00 1 2 876.93402 1752.86077 -0.94 27.60 5263 5263 MS2 18/30 Linfeng_081211_IgG_4.raw High SGAQASSTPLSPTR 6 0 CID 63.79 4.70 1.00 1 2 680.34473 1359.68218 -3.06 20.83 2197 2197 MS2 17/26 Linfeng_091611_rIgG_4.raw High IDSLSAQLSQLQK IPI:IPI00021405.3 10 1 CID 52.97 4.70 1.00 1 2 715.89636 1430.78545 0.32 36.01 8508 8508 MS2 19/24 Linfeng_081211_IgG_3.raw High IDSLSAQLSQLQK 10 0 CID 40.81 4.67 1.00 1 3 477.59796 1430.77933 -3.96 35.12 4128 4128 MS2 30/48 Linfeng_091611_rIgG_4.raw High SGAQASSTPLSPTR 6 0 CID 49.65 4.65 1.00 1 2 680.34509 1359.68291 -2.52 21.10 2170 2170 MS2 17/26 Linfeng_091811_SIN3A_4.raw High IDSLSAQLSQLQK IPI:IPI00021405.3 10 1 CID 20.33 4.61 1.00 1 3 477.59921 1430.78308 -1.33 35.22 7776 7776 MS2 24/48 Linfeng_081211_IgG_4.raw High IDSLSAQLSQLQK 10 0 CID 37.54 4.51 1.00 1 2 715.89343 1430.77959 -3.78 35.10 4126 4126 MS2 19/24 Linfeng_091611_rIgG_4.raw High LQEKEDLQELNDR IPI:IPI00021405.3 6 1 CID 23.17 4.49 1.00 1 3 543.94202 1629.81150 2.19 25.32 4599 4599 MS2 25/48 Linfeng_081211_IgG_4.raw High IDSLSAQLSQLQK IPI:IPI00021405.3 10 1 CID 59.90 4.41 1.00 1 2 715.89624 1430.78520 0.15 35.19 7765 7765 MS2 18/24 Linfeng_081211_IgG_4.raw High LQEKEDLQELNDR IPI:IPI00021405.3 6 1 CID 67.71 4.39 1.00 1 2 815.40692 1629.80657 -0.84 26.74 5227 5227 MS2 16/24 Linfeng_081211_IgG_3.raw High VAVEEVDEEGK 9 0 CID 80.10 4.37 1.00 1 2 602.28900 1203.57073 -2.73 21.81 2331 2331 MS2 18/20 Linfeng_091611_rIgG_4.raw High AAYEAELGDAR 6 0 CID 52.30 4.36 1.00 1 2 583.27557 1165.54387 -3.93 25.05 2788 2788 MS2 17/20 Linfeng_091611_rIgG_4.raw High SGAQASSTPLSPTR IPI:IPI00021405.3 6 1 CID 60.16 4.35 1.00 1 2 680.34619 1359.68511 -0.91 22.88 3927 3927 MS2 17/26 Linfeng_081211_IgG_3.raw High TALINSTGEEVAmR 8 0 CID M13(Oxidation) 77.28 4.28 1.00 1 2 754.37109 1507.73491 -4.81 26.53 2989 2989 MS2 20/26 Linfeng_091611_rIgG_4.raw High AQNTWGcGNSLR 9 0 CID C7(Carbamidomethyl) 58.68 4.27 1.00 1 2 682.31006 1363.61284 -3.21 25.33 2765 2765 MS2 16/22 Linfeng_091811_SIN3A_4.raw High TALINSTGEEVAmR 8 0 CID M13(Oxidation) 96.05 4.25 1.00 1 2 754.37164 1507.73601 -4.08 26.83 2944 2944 MS2 17/26 Linfeng_091811_SIN3A_3.raw High TALINSTGEEVAmR 8 0 CID M13(Oxidation) 77.10 4.18 1.00 1 2 754.37073 1507.73418 -5.30 26.78 2967 2967 MS2 20/26 Linfeng_091811_SIN3A_4.raw High TALINSTGEEVAmR IPI:IPI00021405.3 8 1 CID M13(Oxidation) 77.42 4.13 1.00 1 2 754.37341 1507.73955 -1.74 27.20 5150 5150 MS2 18/26 Linfeng_081211_IgG_4.raw High LADALQELR IPI:IPI00021405.3 11 1 CID 46.26 4.03 1.00 1 2 514.78992 1028.57256 -0.96 33.30 7500 7500 MS2 15/16 Linfeng_081211_IgG_3.raw High ITESEEVVSR IPI:IPI00021405.3 6 1 CID 66.70 3.97 1.00 1 2 574.79279 1148.57829 -0.97 22.88 3929 3929 MS2 17/18 Linfeng_081211_IgG_3.raw High LADALQELR IPI:IPI00021405.3 11 1 CID 43.17 3.93 1.00 1 2 514.78967 1028.57207 -1.43 32.53 6965 6965 MS2 15/16 Linfeng_081211_IgG_6.raw High ITESEEVVSR IPI:IPI00021405.3 6 1 CID 66.80 3.90 1.00 1 2 574.79419 1148.58110 1.47 21.94 3509 3509 MS2 17/18 Linfeng_081211_IgG_4.raw High TVLcGTcGQPADK IPI:IPI00021405.3 6 1 CID "C4(Carbamidomethyl), C7(Carbamidomethyl)" 49.29 3.87 1.00 1 2 703.82422 1406.64116 0.59 22.56 3810 3810 MS2 15/24 Linfeng_081211_IgG_3.raw High AQNTWGcGNSLR IPI:IPI00021405.3 9 1 CID C7(Carbamidomethyl) 100.28 3.86 1.00 1 2 682.31323 1363.61919 1.45 25.82 4759 4759 MS2 16/22 Linfeng_081211_IgG_4.raw High AAYEAELGDAR IPI:IPI00021405.3 6 1 CID 48.70 3.86 1.00 1 2 583.27692 1165.54656 -1.63 26.79 5245 5245 MS2 17/20 Linfeng_081211_IgG_3.raw High AAYEAELGDAR IPI:IPI00021405.3 6 1 CID 56.31 3.84 1.00 1 2 583.27863 1165.54997 1.31 25.92 4795 4795 MS2 17/20 Linfeng_081211_IgG_4.raw High ITESEEVVSR IPI:IPI00021405.3 6 1 CID 47.12 3.83 1.00 1 2 574.79266 1148.57805 -1.18 21.80 3672 3672 MS2 16/18 Linfeng_081211_IgG_6.raw High AAYEAELGDAR IPI:IPI00021405.3 6 1 CID 56.64 3.81 1.00 1 2 583.27722 1165.54717 -1.10 26.73 5223 5223 MS2 16/20 Linfeng_081211_IgG_3.raw High SNEDQSmGNWQIK IPI:IPI00021405.3 9 1 CID M7(Oxidation) 49.41 3.77 1.00 1 2 776.83691 1552.66655 -2.04 26.58 5027 5027 MS2 17/24 Linfeng_081211_IgG_4.raw High LADALQELR IPI:IPI00021405.3 11 1 CID 44.88 3.74 1.00 1 2 514.79016 1028.57305 -0.48 32.30 6727 6727 MS2 15/16 Linfeng_081211_IgG_5.raw High AQNTWGcGNSLR IPI:IPI00021405.3 9 1 CID C7(Carbamidomethyl) 89.77 3.74 1.00 1 2 682.31171 1363.61614 -0.79 26.66 5199 5199 MS2 15/22 Linfeng_081211_IgG_3.raw High EGDLIAAQAR IPI:IPI00021405.3 11 1 CID 50.41 3.67 1.00 1 2 522.27631 1043.54534 -2.61 25.81 4924 4924 MS2 15/18 Linfeng_081211_IgG_3.raw High ITESEEVVSR IPI:IPI00021405.3 6 1 CID 52.26 3.57 1.00 1 2 574.79272 1148.57817 -1.08 22.19 3489 3489 MS2 17/18 Linfeng_081211_IgG_5.raw High VAVEEVDEEGKFVR IPI:IPI00021405.3 9 1 CID 38.31 3.51 1.00 1 2 803.40936 1605.81145 -0.33 28.41 5512 5512 MS2 13/26 Linfeng_081211_IgG_4.raw High VAVEEVDEEGK IPI:IPI00021405.3 9 1 CID 73.76 3.51 1.00 1 2 602.29114 1203.57500 0.82 22.74 3757 3757 MS2 18/20 Linfeng_081211_IgG_4.raw High ITESEEVVSR IPI:IPI00021405.3 6 1 CID 23.99 3.51 1.00 1 2 574.79303 1148.57878 -0.55 23.26 3735 3735 MS2 12/18 Linfeng_081211_IgG_2.raw IPI:IPI00450768.7 432 48.1 5.02 "Keratin, type I cytoskeletal 17" 20.60 56 9 564.02 20.60 35 9 271.46 5.56 9 2 306.80 8.33 12 3 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 53.47 4.74 1.00 1 2 681.34851 1361.68974 -0.75 22.89 3683 3683 MS2 19/24 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 66.08 4.73 1.00 1 2 681.34686 1361.68645 -3.17 21.73 2231 2231 MS2 18/24 Linfeng_091811_SIN3A_1.raw High EVATNSELVQSGK 7 0 CID 50.50 4.72 1.00 1 2 681.34760 1361.68791 -2.09 21.80 2222 2222 MS2 18/24 Linfeng_091611_rIgG_7.raw High EVATNSELVQSGK 7 0 CID 66.45 4.69 1.00 1 2 681.34534 1361.68340 -5.41 21.87 2424 2424 MS2 19/24 Linfeng_091611_rIgG_8.raw High EVATNSELVQSGK 7 0 CID 61.40 4.68 1.00 1 2 681.34827 1361.68926 -1.11 21.78 2146 2146 MS2 17/24 Linfeng_091611_rIgG_9.raw High EVATNSELVQSGK 7 0 CID 63.72 4.65 1.00 1 2 681.34723 1361.68718 -2.63 21.85 2150 2150 MS2 18/24 Linfeng_091611_rIgG_2.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 62.16 4.65 1.00 1 2 681.34821 1361.68913 -1.19 22.44 3853 3853 MS2 17/24 Linfeng_081211_IgG_6.raw High ASLEGNLAETENR IPI:IPI00450768.7 5 1 CID 83.59 4.64 1.00 1 2 702.33917 1403.67107 -3.64 26.99 4913 4913 MS2 19/24 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 59.24 4.64 1.00 1 2 681.34674 1361.68620 -3.35 21.98 2402 2402 MS2 20/24 Linfeng_091811_SIN3A_5.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 58.14 4.63 1.00 1 2 681.34839 1361.68950 -0.93 23.96 3974 3974 MS2 18/24 Linfeng_081211_IgG_2.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 72.04 4.63 1.00 1 2 681.34875 1361.69023 -0.39 22.67 3731 3731 MS2 17/24 Linfeng_081211_IgG_4.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.51 4.60 1.00 1 2 681.34613 1361.68498 -4.24 21.96 2220 2220 MS2 20/24 Linfeng_091811_SIN3A_2.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 68.08 4.58 1.00 1 2 681.34637 1361.68547 -3.88 21.84 2047 2047 MS2 19/24 Linfeng_091811_SIN3A_7.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 66.95 4.57 1.00 1 2 681.35010 1361.69292 1.58 24.53 3070 3070 MS2 18/24 Linfeng_081211_IgG_1.raw High EVATNSELVQSGK 7 0 CID 75.37 4.54 1.00 1 2 681.34729 1361.68730 -2.54 21.74 2145 2145 MS2 19/24 Linfeng_091611_rIgG_1.raw High EVATNSELVQSGK 7 0 CID 71.17 4.54 1.00 1 2 681.34741 1361.68755 -2.36 21.92 2293 2293 MS2 20/24 Linfeng_091611_rIgG_6.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 60.18 4.48 1.00 1 2 681.34875 1361.69023 -0.39 23.53 2855 2855 MS2 20/24 Linfeng_081211_IgG_1.raw High EVATNSELVQSGK 7 0 CID 67.13 4.45 1.00 1 2 681.34790 1361.68852 -1.64 21.93 2335 2335 MS2 19/24 Linfeng_091611_rIgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 72.94 4.45 1.00 1 2 681.34711 1361.68694 -2.81 22.08 2300 2300 MS2 18/24 Linfeng_091811_SIN3A_6.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.02 4.40 1.00 1 2 681.34717 1361.68706 -2.72 21.85 2065 2065 MS2 17/24 Linfeng_091811_SIN3A_10.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 42.31 4.40 1.00 1 2 690.36438 1379.72148 -4.58 28.45 3298 3298 MS2 17/20 Linfeng_091811_SIN3A_5.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.45 4.39 1.00 1 2 681.34705 1361.68682 -2.90 21.99 2265 2265 MS2 19/24 Linfeng_091811_SIN3A_3.raw High ALEEANTELEVK IPI:IPI00450768.7;IPI:IPI00791156.1 6 2 CID 55.29 4.39 1.00 1 2 673.34467 1345.68205 -1.91 28.02 5441 5441 MS2 18/22 Linfeng_081211_IgG_6.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 62.23 4.39 1.00 1 2 681.34894 1361.69060 -0.12 22.27 3850 3850 MS2 15/24 Linfeng_081211_IgG_8.raw High ALEEANTELEVK 6 0 CID 66.08 4.36 1.00 1 2 673.34277 1345.67827 -4.72 27.51 3168 3168 MS2 18/22 Linfeng_091811_SIN3A_5.raw High ASLEGNLAETENR IPI:IPI00450768.7 5 1 CID 74.15 4.34 1.00 1 2 702.34119 1403.67510 -0.77 31.69 4447 4447 MS2 17/24 Linfeng_081211_IgG_1.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 51.90 4.31 1.00 1 2 690.36426 1379.72124 -4.76 28.32 3137 3137 MS2 17/20 Linfeng_091811_SIN3A_1.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 73.37 4.31 1.00 1 2 681.34735 1361.68743 -2.45 22.05 2303 2303 MS2 18/24 Linfeng_091811_SIN3A_4.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 47.82 4.29 1.00 1 2 690.36652 1379.72576 -1.48 29.08 5745 5745 MS2 17/20 Linfeng_081211_IgG_4.raw High EVATNSELVQSGK 7 0 CID 61.76 4.29 1.00 1 2 681.34692 1361.68657 -3.08 21.82 2333 2333 MS2 18/24 Linfeng_091611_rIgG_4.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 50.42 4.25 1.00 1 2 690.36621 1379.72515 -1.93 28.87 5534 5534 MS2 17/20 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 69.78 4.24 1.00 1 2 681.34845 1361.68962 -0.84 22.87 3810 3810 MS2 17/24 Linfeng_081211_IgG_7.raw High ALEEANTELEVK IPI:IPI00450768.7;IPI:IPI00791156.1 6 2 CID 66.32 4.22 1.00 1 2 673.34564 1345.68401 -0.46 29.08 5919 5919 MS2 17/22 Linfeng_081211_IgG_3.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 64.58 4.19 1.00 1 2 681.34808 1361.68889 -1.37 22.65 3874 3874 MS2 16/24 Linfeng_081211_IgG_10.raw High TRLEQEIATYR IPI:IPI00217963.3 14 1 CID 48.03 4.14 1.00 1 2 690.36597 1379.72466 -2.28 28.26 3027 3027 MS2 17/20 Linfeng_091611_rIgG_9.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 76.65 4.08 1.00 1 2 681.34760 1361.68791 -2.09 22.08 2212 2212 MS2 19/24 Linfeng_091811_SIN3A_9.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 47.31 4.05 1.00 1 2 681.34827 1361.68926 -1.11 23.54 4155 4155 MS2 18/24 Linfeng_081211_IgG_3.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 50.83 3.95 1.00 1 2 561.79205 1122.57683 -1.93 26.79 5244 5244 MS2 15/16 Linfeng_081211_IgG_3.raw High cEMEQQNQEYK IPI:IPI00384444.6;IPI:IPI00450768.7 5 2 CID C1(Carbamidomethyl) 51.00 3.91 1.00 1 2 743.80023 1486.59319 -0.38 20.41 3067 3067 MS2 16/20 Linfeng_081211_IgG_3.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 51.34 3.88 1.00 1 2 690.36676 1379.72624 -1.13 28.80 5712 5712 MS2 15/20 Linfeng_081211_IgG_10.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 53.87 3.87 1.00 1 2 681.34924 1361.69121 0.33 23.51 4145 4145 MS2 19/24 Linfeng_081211_IgG_3.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 41.49 3.86 1.00 1 2 690.36737 1379.72746 -0.24 30.27 6201 6201 MS2 11/20 Linfeng_081211_IgG_6.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 44.46 3.76 1.00 1 2 515.30029 1029.59331 -0.61 34.85 7148 7148 MS2 15/16 Linfeng_081211_IgG_2.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.79 3.72 1.00 1 2 515.30084 1029.59441 0.45 34.50 7954 7954 MS2 15/16 Linfeng_081211_IgG_3.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.65 3.66 1.00 1 2 515.30029 1029.59331 -0.61 33.71 7363 7363 MS2 15/16 Linfeng_081211_IgG_7.raw High cEMEQQNQEYK IPI:IPI00384444.6;IPI:IPI00450768.7 5 2 CID C1(Carbamidomethyl) 56.56 3.66 1.00 1 2 743.79999 1486.59270 -0.71 20.71 2938 2938 MS2 16/20 Linfeng_081211_IgG_2.raw High LSGGLGAGScR IPI:IPI00450768.7;IPI:IPI00791156.1 4 2 CID C10(Carbamidomethyl) 45.50 3.65 1.00 1 2 517.75513 1034.50298 -1.78 20.98 3130 3130 MS2 16/20 Linfeng_081211_IgG_5.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 43.56 3.61 1.00 1 2 515.30023 1029.59319 -0.73 42.53 6934 6934 MS2 15/16 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 52.13 3.60 1.00 1 2 561.79163 1122.57598 -2.70 31.59 4423 4423 MS2 15/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 37.34 3.57 1.00 1 2 515.29987 1029.59245 -1.44 33.17 7385 7385 MS2 15/16 Linfeng_081211_IgG_8.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 66.85 3.57 1.00 1 2 681.34985 1361.69243 1.23 22.78 3456 3456 MS2 13/24 Linfeng_081211_IgG_9.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 42.21 3.55 1.00 1 2 515.30115 1029.59502 1.05 36.35 6128 6128 MS2 15/16 Linfeng_081211_IgG_9.raw High DAEDWFFSK IPI:IPI00450768.7 5 1 CID 49.36 3.55 1.00 1 2 572.75037 1144.49346 -1.02 41.49 9992 9992 MS2 13/16 Linfeng_081211_IgG_8.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 56.04 3.53 1.00 1 2 561.79254 1122.57781 -1.06 25.49 4862 4862 MS2 15/16 Linfeng_081211_IgG_8.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 38.64 3.48 1.00 1 2 561.79089 1122.57451 -4.00 25.80 4846 4846 MS2 15/16 Linfeng_081211_IgG_10.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 47.59 3.47 1.00 1 2 515.29950 1029.59172 -2.16 33.58 7207 7207 MS2 15/16 Linfeng_081211_IgG_5.raw IPI:IPI00376379.4 578 61.9 5.99 "keratin, type II cytoskeletal 1b" 12.28 65 6 462.89 12.28 41 6 181.09 2.08 11 1 193.32 4.15 13 2 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 63.88 5.14 1.00 1 2 738.39508 1475.78288 -1.65 38.00 5645 5645 MS2 19/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 38.15 5.06 1.00 1 2 738.39508 1475.78288 -1.65 29.10 5752 5752 MS2 18/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 37.52 5.02 1.00 1 2 738.39545 1475.78362 -1.15 35.98 5238 5238 MS2 19/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 60.22 4.96 1.00 1 2 738.39459 1475.78191 -2.31 28.57 5645 5645 MS2 19/22 Linfeng_081211_IgG_10.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.00 4.94 1.00 1 2 738.39252 1475.77776 -5.13 28.21 3086 3086 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.01 4.93 1.00 1 2 738.39386 1475.78044 -3.31 28.25 3269 3269 MS2 19/22 Linfeng_091811_SIN3A_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.89 4.91 1.00 1 2 738.39429 1475.78130 -2.73 28.02 3096 3096 MS2 19/22 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 57.95 4.89 1.00 1 2 738.39478 1475.78227 -2.06 28.11 3169 3169 MS2 19/22 Linfeng_091611_rIgG_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.55 4.88 1.00 1 2 738.39478 1475.78227 -2.06 28.15 3124 3124 MS2 19/22 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.26 4.88 1.00 1 2 738.39459 1475.78191 -2.31 29.97 6257 6257 MS2 18/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 58.76 4.87 1.00 1 2 738.39398 1475.78069 -3.14 28.72 3018 3018 MS2 19/22 Linfeng_091811_SIN3A_10.raw High SLDLDSIIDAVR 1 0 CID 56.20 4.87 1.00 1 2 658.85565 1316.70403 -1.26 46.91 5556 5556 MS2 19/22 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 65.30 4.86 1.00 1 2 738.39569 1475.78411 -0.82 28.31 5686 5686 MS2 19/22 Linfeng_081211_IgG_8.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 55.59 4.86 1.00 1 2 738.39386 1475.78044 -3.31 28.25 2927 2927 MS2 19/22 Linfeng_091811_SIN3A_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.18 4.85 1.00 1 2 738.39447 1475.78166 -2.48 27.97 2989 2989 MS2 19/22 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 59.27 4.84 1.00 1 2 738.39368 1475.78008 -3.55 28.23 3165 3165 MS2 19/22 Linfeng_091811_SIN3A_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.27 4.84 1.00 1 2 738.39581 1475.78435 -0.66 32.20 5244 5244 MS2 20/22 Linfeng_081211_IgG_9.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 60.35 4.84 1.00 1 2 738.39471 1475.78215 -2.15 28.20 3156 3156 MS2 19/22 Linfeng_091611_rIgG_6.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.34 4.83 1.00 1 2 738.39417 1475.78105 -2.89 28.28 3155 3155 MS2 19/22 Linfeng_091811_SIN3A_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 46.46 4.82 1.00 1 2 738.39392 1475.78057 -3.22 27.95 3181 3181 MS2 19/22 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 62.98 4.81 1.00 1 2 738.39532 1475.78337 -1.32 28.01 3072 3072 MS2 19/22 Linfeng_091611_rIgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 62.76 4.80 1.00 1 2 738.39618 1475.78508 -0.16 34.27 7583 7583 MS2 18/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.78 4.80 1.00 1 2 738.39648 1475.78569 0.25 31.30 6119 6119 MS2 19/22 Linfeng_081211_IgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 56.98 4.79 1.00 1 2 738.39423 1475.78118 -2.81 28.04 3003 3003 MS2 19/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 61.67 4.79 1.00 1 2 738.39471 1475.78215 -2.15 28.02 2995 2995 MS2 19/22 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 65.63 4.78 1.00 1 2 738.39240 1475.77751 -5.29 28.26 2955 2955 MS2 19/22 Linfeng_091811_SIN3A_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 46.52 4.75 1.00 1 2 738.39612 1475.78496 -0.25 28.81 5633 5633 MS2 19/22 Linfeng_081211_IgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.57 4.74 1.00 1 2 738.39581 1475.78435 -0.66 30.63 5926 5926 MS2 19/22 Linfeng_081211_IgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 61.92 4.73 1.00 1 2 738.39539 1475.78349 -1.24 28.83 5516 5516 MS2 19/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.03 4.73 1.00 1 2 738.39471 1475.78215 -2.15 27.95 2612 2612 MS2 19/22 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 69.10 4.71 1.00 1 2 738.39648 1475.78569 0.25 31.32 5073 5073 MS2 19/22 Linfeng_081211_IgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 57.71 4.70 1.00 1 2 738.39252 1475.77776 -5.13 28.26 3054 3054 MS2 20/22 Linfeng_091811_SIN3A_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 61.92 4.66 1.00 1 2 738.39319 1475.77910 -4.22 28.37 3014 3014 MS2 19/22 Linfeng_091811_SIN3A_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 64.44 4.66 1.00 1 2 738.39435 1475.78142 -2.64 28.03 3273 3273 MS2 19/22 Linfeng_091611_rIgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 59.87 4.66 1.00 1 2 738.39441 1475.78154 -2.56 27.99 2781 2781 MS2 19/22 Linfeng_091611_rIgG_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 66.07 4.64 1.00 1 2 738.39502 1475.78276 -1.73 36.99 5443 5443 MS2 19/22 Linfeng_081211_IgG_1.raw High LQDLEEALQQSK IPI:IPI00376379.4 1 1 CID 52.06 4.58 1.00 1 2 701.36499 1401.72270 0.46 34.33 7886 7886 MS2 19/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.61 4.58 1.00 1 3 492.59863 1475.78135 -2.69 37.31 5515 5515 MS2 27/44 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.92 4.54 1.00 1 2 738.39655 1475.78581 0.33 34.19 7441 7441 MS2 19/22 Linfeng_081211_IgG_4.raw High VDTLTGEVNFLK IPI:IPI00376379.4 1 1 CID 28.84 4.53 1.00 1 2 668.36108 1335.71489 -0.47 37.79 8545 8545 MS2 17/22 Linfeng_081211_IgG_5.raw High SLDLDSIIDAVR IPI:IPI00376379.4 1 1 CID 52.58 4.47 1.00 1 2 658.85632 1316.70537 -0.24 46.57 10964 10964 MS2 19/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 42.53 4.40 1.00 1 2 738.39606 1475.78484 -0.33 42.58 6951 6951 MS2 19/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.89 4.38 1.00 1 2 738.39496 1475.78264 -1.82 31.93 6979 6979 MS2 15/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 78.59 4.36 1.00 1 2 738.39624 1475.78520 -0.08 30.31 4878 4878 MS2 17/22 Linfeng_081211_IgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.62 4.28 1.00 1 3 492.59875 1475.78171 -2.45 28.17 3126 3126 MS2 25/44 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 34.37 4.27 1.00 1 2 738.39459 1475.78191 -2.31 28.37 3238 3238 MS2 19/22 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.87 4.19 1.00 1 2 738.39661 1475.78594 0.42 26.20 4887 4887 MS2 17/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 40.65 4.16 1.00 1 2 738.39563 1475.78398 -0.91 32.31 6419 6419 MS2 16/22 Linfeng_081211_IgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.73 4.12 1.00 1 2 738.39594 1475.78459 -0.49 25.12 4530 4530 MS2 17/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.78 4.12 1.00 1 2 738.39673 1475.78618 0.58 29.55 5588 5588 MS2 16/22 Linfeng_081211_IgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.78 4.08 1.00 1 3 492.59982 1475.78492 -0.27 29.90 5704 5704 MS2 22/44 Linfeng_081211_IgG_2.raw High VDTLTGEVNFLK IPI:IPI00376379.4 1 1 CID 68.86 3.99 1.00 1 2 668.36041 1335.71355 -1.48 38.83 9465 9465 MS2 18/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.99 3.97 1.00 1 2 738.39655 1475.78581 0.33 28.36 5498 5498 MS2 16/22 Linfeng_081211_IgG_4.raw High VDTLTGEVNFLK IPI:IPI00376379.4 1 1 CID 60.67 3.96 1.00 1 2 668.36139 1335.71550 -0.01 37.79 8567 8567 MS2 17/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.39 3.88 1.00 1 2 738.39716 1475.78703 1.16 39.99 6212 6212 MS2 15/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 43.80 3.81 1.00 1 2 738.39691 1475.78655 0.83 30.72 6302 6302 MS2 13/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 47.05 3.78 1.00 1 2 738.39484 1475.78240 -1.98 28.25 5512 5512 MS2 14/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.15 3.71 1.00 1 2 738.39502 1475.78276 -1.73 29.28 5994 5994 MS2 15/22 Linfeng_081211_IgG_3.raw High LQDLEEALQQSK IPI:IPI00376379.4 1 1 CID 65.08 3.65 1.00 1 2 701.36487 1401.72246 0.28 33.51 7225 7225 MS2 13/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 30.99 3.65 1.00 1 2 738.39575 1475.78423 -0.74 33.32 6729 6729 MS2 13/22 Linfeng_081211_IgG_2.raw High SKDEAEALYQTK IPI:IPI00376379.4 1 1 CID 33.56 3.59 1.00 1 2 691.84424 1382.68120 0.98 22.94 3831 3831 MS2 12/22 Linfeng_081211_IgG_4.raw High SLDLDSIIDAVR IPI:IPI00376379.4 1 1 CID 20.73 3.53 1.00 1 2 658.85742 1316.70757 1.42 47.26 11431 11431 MS2 14/22 Linfeng_081211_IgG_8.raw High LQDLEEALQQSK IPI:IPI00376379.4 1 1 CID 33.02 3.52 1.00 1 2 701.36530 1401.72331 0.89 34.42 7921 7921 MS2 19/22 Linfeng_081211_IgG_3.raw High SKDEAEALYQTK IPI:IPI00376379.4 1 1 CID 52.49 3.52 1.00 1 2 691.84259 1382.67790 -1.41 23.11 3754 3754 MS2 14/22 Linfeng_081211_IgG_5.raw High QVDLLSAEQmR IPI:IPI00376379.4 1 1 CID M10(Oxidation) 49.98 3.48 1.00 1 2 653.32684 1305.64641 -0.30 30.35 6168 6168 MS2 15/20 Linfeng_081211_IgG_4.raw IPI:IPI00453473.6 103 11.4 11.36 Histone H4 52.43 68 8 526.12 52.43 53 8 203.08 22.33 8 3 270.15 40.78 7 5 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High VFLENVIRDAVTYTEHAK IPI:IPI00453473.6 1 1 CID 82.97 6.10 1.00 1 3 702.37091 2105.09818 -2.13 35.27 7867 7867 MS2 27/68 Linfeng_081211_IgG_10.raw High VFLENVIRDAVTYTEHAK 1 0 CID 87.18 5.55 1.00 1 3 702.37030 2105.09635 -3.00 45.73 5218 5218 MS2 26/68 Linfeng_091811_SIN3A_10.raw High KTVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 81.89 5.50 1.00 1 3 480.27032 1438.79642 -0.74 36.88 8327 8327 MS2 27/48 Linfeng_081211_IgG_10.raw High KTVTAMDVVYALK 1 0 CID 68.66 5.31 1.00 1 3 480.26926 1438.79322 -2.96 36.81 3901 3901 MS2 30/48 Linfeng_091611_rIgG_10.raw High KTVTAmDVVYALK 1 0 CID M6(Oxidation) 79.82 5.22 1.00 1 2 727.89606 1454.78484 -5.20 32.39 3513 3513 MS2 21/24 Linfeng_091811_SIN3A_10.raw High KTVTAMDVVYALK 1 0 CID 87.20 5.22 1.00 1 2 719.89954 1438.79180 -3.95 37.17 4128 4128 MS2 22/24 Linfeng_091811_SIN3A_10.raw High KTVTAMDVVYALK 1 0 CID 91.51 5.20 1.00 1 2 719.90051 1438.79375 -2.59 36.88 3910 3910 MS2 22/24 Linfeng_091611_rIgG_10.raw High TVTAMDVVYALK 1 0 CID 57.08 5.13 1.00 1 3 437.57095 1310.69831 -3.21 40.95 4429 4429 MS2 27/44 Linfeng_091611_rIgG_10.raw High KTVTAmDVVYALKR IPI:IPI00453473.6 1 1 CID M6(Oxidation) 93.66 5.10 1.00 1 3 537.63550 1610.89194 -0.98 31.13 6472 6472 MS2 22/52 Linfeng_081211_IgG_10.raw High KTVTAmDVVYALK 1 0 CID M6(Oxidation) 84.11 5.06 1.00 1 2 727.89844 1454.78960 -1.92 32.05 3305 3305 MS2 19/24 Linfeng_091611_rIgG_10.raw High KTVTAMDVVYALK 1 0 CID 61.36 4.96 1.00 1 3 480.26855 1438.79111 -4.43 37.04 4111 4111 MS2 31/48 Linfeng_091811_SIN3A_10.raw High KTVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M6(Oxidation) 87.95 4.79 1.00 1 2 727.89801 1454.78874 -2.51 32.09 6828 6828 MS2 22/24 Linfeng_081211_IgG_10.raw High KTVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 90.64 4.62 1.00 1 2 719.90240 1438.79753 0.04 36.90 8334 8334 MS2 19/24 Linfeng_081211_IgG_10.raw High KTVTAMDVVYALKR 1 0 CID 83.97 4.57 1.00 1 3 532.30212 1594.89182 -4.25 34.98 3848 3848 MS2 31/52 Linfeng_091811_SIN3A_10.raw High KTVTAmDVVYALK 1 0 CID M6(Oxidation) 43.40 4.53 1.00 1 3 485.60095 1454.78830 -2.81 36.87 3908 3908 MS2 27/48 Linfeng_091611_rIgG_10.raw High TVTAMDVVYALK 1 0 CID 65.62 4.40 1.00 1 3 437.57034 1310.69648 -4.60 41.17 4642 4642 MS2 28/44 Linfeng_091811_SIN3A_10.raw High TVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 58.68 4.26 1.00 1 3 437.57275 1310.70371 0.91 40.72 9678 9678 MS2 25/44 Linfeng_081211_IgG_10.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 56.39 4.24 1.00 1 2 663.85364 1326.70000 1.94 40.62 9641 9641 MS2 17/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 62.55 4.20 1.00 1 2 590.81354 1180.61980 -0.91 33.72 7325 7325 MS2 17/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR 1 0 CID 51.71 4.14 1.00 1 2 590.81317 1180.61907 -1.53 30.17 3066 3066 MS2 16/18 Linfeng_091611_rIgG_10.raw High KTVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M6(Oxidation) 24.23 4.13 1.00 1 2 727.90027 1454.79326 0.59 33.10 7102 7102 MS2 13/24 Linfeng_081211_IgG_10.raw High ISGLIYEETR 1 0 CID 63.82 4.13 1.00 1 2 590.81232 1180.61736 -2.98 30.33 3310 3310 MS2 17/18 Linfeng_091611_rIgG_2.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 60.96 4.12 1.00 1 2 663.85132 1326.69536 -1.56 32.06 6814 6814 MS2 18/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 64.84 4.11 1.00 1 2 590.81360 1180.61992 -0.81 31.44 6584 6584 MS2 16/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR 1 0 CID 56.45 4.09 1.00 1 2 590.81226 1180.61724 -3.08 30.60 3247 3247 MS2 17/18 Linfeng_091811_SIN3A_7.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 69.62 4.08 1.00 1 2 590.81354 1180.61980 -0.91 31.18 6461 6461 MS2 16/18 Linfeng_081211_IgG_7.raw High TVTAmDVVYALK 1 0 CID M5(Oxidation) 66.16 4.07 1.00 1 2 663.85150 1326.69573 -1.28 36.61 3876 3876 MS2 18/22 Linfeng_091611_rIgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 62.97 4.05 1.00 1 2 590.81396 1180.62065 -0.18 31.17 6526 6526 MS2 17/18 Linfeng_081211_IgG_6.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 31.33 4.00 1.00 1 2 590.81354 1180.61980 -0.91 40.44 6340 6340 MS2 16/18 Linfeng_081211_IgG_1.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 50.14 3.99 1.00 1 2 590.81329 1180.61931 -1.32 30.43 6261 6261 MS2 16/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 58.20 3.97 1.00 1 2 590.81366 1180.62004 -0.70 32.09 7040 7040 MS2 16/18 Linfeng_081211_IgG_3.raw High TVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 51.93 3.95 1.00 1 2 655.85681 1310.70635 2.93 41.67 9966 9966 MS2 17/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 29.12 3.94 1.00 1 2 590.81531 1180.62334 2.09 53.82 12658 12658 MS2 15/18 Linfeng_081211_IgG_10.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 56.04 3.93 1.00 1 2 663.37927 1325.75127 -1.79 26.51 5036 5036 MS2 14/22 Linfeng_081211_IgG_6.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 65.89 3.91 1.00 1 2 590.81519 1180.62309 1.88 46.74 11365 11365 MS2 16/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 37.47 3.88 1.00 1 2 590.81323 1180.61919 -1.43 30.70 6518 6518 MS2 16/18 Linfeng_081211_IgG_8.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 43.91 3.87 1.00 1 2 590.81311 1180.61894 -1.63 32.37 6437 6437 MS2 16/18 Linfeng_081211_IgG_2.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 73.47 3.86 1.00 1 2 663.37939 1325.75151 -1.61 25.84 4989 4989 MS2 15/22 Linfeng_081211_IgG_8.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 55.80 3.86 1.00 1 2 663.85089 1326.69451 -2.20 35.38 7905 7905 MS2 17/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 59.73 3.85 1.00 1 2 590.81213 1180.61699 -3.29 32.47 6883 6883 MS2 16/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 22.68 3.83 1.00 1 2 590.81366 1180.62004 -0.70 31.10 6441 6441 MS2 16/18 Linfeng_081211_IgG_4.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 42.22 3.81 1.00 1 2 663.85175 1326.69621 -0.91 33.72 7326 7326 MS2 15/22 Linfeng_081211_IgG_10.raw High TVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 74.89 3.75 1.00 1 2 655.85468 1310.70207 -0.33 41.15 9898 9898 MS2 15/22 Linfeng_081211_IgG_8.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 62.83 3.74 1.00 1 2 663.37927 1325.75127 -1.79 26.52 4773 4773 MS2 13/22 Linfeng_081211_IgG_5.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 52.25 3.73 1.00 1 2 590.81531 1180.62334 2.09 40.66 9657 9657 MS2 15/18 Linfeng_081211_IgG_10.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 63.16 3.72 1.00 1 2 663.85193 1326.69658 -0.64 36.39 8164 8164 MS2 19/22 Linfeng_081211_IgG_10.raw High TVTAMDVVYALKR IPI:IPI00453473.6 1 1 CID 67.95 3.72 1.00 1 2 733.90625 1466.80522 1.09 37.81 8652 8652 MS2 19/24 Linfeng_081211_IgG_10.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 68.70 3.71 1.00 1 2 663.37933 1325.75139 -1.70 26.40 4955 4955 MS2 14/22 Linfeng_081211_IgG_7.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 51.75 3.69 1.00 1 2 590.81555 1180.62383 2.50 50.79 12202 12202 MS2 14/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 47.04 3.68 1.00 1 2 590.81458 1180.62187 0.85 52.81 12520 12520 MS2 15/18 Linfeng_081211_IgG_10.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 46.49 3.68 1.00 1 2 663.37933 1325.75139 -1.70 27.39 5271 5271 MS2 15/22 Linfeng_081211_IgG_10.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 56.59 3.67 1.00 1 2 663.85254 1326.69780 0.28 38.58 8921 8921 MS2 18/22 Linfeng_081211_IgG_10.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 66.09 3.64 1.00 1 2 663.37982 1325.75237 -0.96 22.97 3980 3980 MS2 14/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 48.86 3.63 1.00 1 2 590.81415 1180.62102 0.13 38.23 8795 8795 MS2 15/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 38.31 3.62 1.00 1 2 590.81561 1180.62395 2.61 41.68 9967 9967 MS2 15/18 Linfeng_081211_IgG_10.raw High TVTAmDVVYALKR IPI:IPI00453473.6 1 1 CID M5(Oxidation) 80.17 3.60 1.00 1 2 741.90179 1482.79631 -1.51 33.88 7386 7386 MS2 16/24 Linfeng_081211_IgG_10.raw High TVTAMDVVYALK IPI:IPI00453473.6 1 1 CID 61.43 3.58 1.00 1 2 655.85626 1310.70525 2.09 40.65 9653 9653 MS2 19/22 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 50.54 3.55 1.00 1 2 590.81390 1180.62053 -0.29 43.71 10597 10597 MS2 15/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 43.86 3.55 1.00 1 2 590.81555 1180.62383 2.50 42.69 10273 10273 MS2 16/18 Linfeng_081211_IgG_10.raw High VFLENVIR IPI:IPI00453473.6 1 1 CID 39.04 3.53 1.00 1 2 495.29218 989.57707 -0.83 36.37 8156 8156 MS2 13/14 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 36.62 3.53 1.00 1 2 590.81360 1180.61992 -0.81 45.73 11112 11112 MS2 15/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 21.60 3.52 1.00 1 2 590.81335 1180.61943 -1.22 62.89 13646 13646 MS2 14/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 67.66 3.50 1.00 1 2 590.81384 1180.62041 -0.39 35.16 7826 7826 MS2 16/18 Linfeng_081211_IgG_10.raw High KTVTAmDVVYALKR IPI:IPI00453473.6 1 1 CID M6(Oxidation) 19.04 3.49 1.00 1 2 805.95050 1610.89372 0.13 31.24 6509 6509 MS2 13/26 Linfeng_081211_IgG_10.raw High DNIQGITKPAIR IPI:IPI00453473.6 1 1 CID 66.00 3.49 1.00 1 2 663.38074 1325.75420 0.42 26.34 4934 4934 MS2 13/22 Linfeng_081211_IgG_4.raw High TVTAmDVVYALK IPI:IPI00453473.6 1 1 CID M5(Oxidation) 40.86 3.49 1.00 1 2 663.85345 1326.69963 1.66 44.08 7394 7394 MS2 14/22 Linfeng_081211_IgG_1.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 33.97 3.48 1.00 1 2 590.81537 1180.62346 2.19 51.80 12373 12373 MS2 12/18 Linfeng_081211_IgG_10.raw High ISGLIYEETR IPI:IPI00453473.6 1 1 CID 21.86 3.47 1.00 1 2 590.81409 1180.62090 0.02 34.37 5706 5706 MS2 15/18 Linfeng_081211_IgG_9.raw IPI:IPI00910738.1 526 55.7 8.43 "cDNA FLJ60647, highly similar to Keratin, type II cytoskeletal 6B" 38.97 129 19 839.18 33.46 67 16 869.02 19.58 29 7 619.50 28.33 33 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALYDAELSQmQTHISDTSVVLSmDNNR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID "M10(Oxidation), M23(Oxidation)" 89.24 7.34 1.00 1 3 1024.13904 3070.40256 -2.21 34.43 4103 4103 MS2 38/104 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 106.21 6.20 1.00 1 4 605.31854 2418.25234 0.47 54.58 6405 6405 MS2 43/120 Linfeng_091811_SIN3A_6.raw High SRGSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C11(Carbamidomethyl) 38.71 6.18 1.00 1 3 556.59198 1667.76139 -3.24 22.36 2252 2252 MS2 32/72 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 139.38 6.09 1.00 1 4 605.31946 2418.25600 1.99 54.60 6284 6284 MS2 43/120 Linfeng_091811_SIN3A_9.raw High QNLEPLFEQYINNLR 10 0 CID 53.05 6.04 1.00 1 3 630.99329 1890.96531 -2.96 47.34 5070 5070 MS2 26/56 Linfeng_091611_rIgG_3.raw High QNLEPLFEQYINNLR 10 0 CID 71.16 5.95 1.00 1 3 630.99408 1890.96769 -1.70 47.49 5476 5476 MS2 26/56 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 102.49 5.86 1.00 1 4 605.31946 2418.25600 1.99 54.41 6376 6376 MS2 41/120 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 57.50 5.86 1.00 1 3 630.99371 1890.96659 -2.28 47.69 5658 5658 MS2 26/56 Linfeng_091811_SIN3A_3.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 55.54 5.84 1.00 1 3 630.99359 1890.96622 -2.48 47.68 5625 5625 MS2 27/56 Linfeng_091811_SIN3A_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 61.49 5.78 1.00 1 3 630.99561 1890.97226 0.72 47.71 5843 5843 MS2 28/56 Linfeng_091811_SIN3A_5.raw High QNLEPLFEQYINNLR 10 0 CID 67.64 5.67 1.00 1 3 630.99402 1890.96750 -1.80 47.26 5499 5499 MS2 24/56 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 66.23 5.67 1.00 1 3 630.99329 1890.96531 -2.96 47.33 5477 5477 MS2 25/56 Linfeng_091611_rIgG_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 75.04 5.66 1.00 1 3 630.99408 1890.96769 -1.70 47.59 5641 5641 MS2 28/56 Linfeng_091811_SIN3A_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 112.94 5.43 1.00 1 2 799.88080 1598.75432 -3.06 29.46 3293 3293 MS2 21/32 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 42.47 5.19 1.00 1 3 630.99548 1890.97190 0.53 47.08 11097 11097 MS2 23/56 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 86.81 5.19 1.00 1 2 799.88031 1598.75334 -3.67 29.62 3240 3240 MS2 15/32 Linfeng_091811_SIN3A_9.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 96.40 5.18 1.00 1 2 829.89722 1658.78716 -2.66 33.79 7286 7286 MS2 21/28 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 107.94 5.16 1.00 1 2 799.88336 1598.75945 0.15 29.84 6066 6066 MS2 17/32 Linfeng_081211_IgG_6.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 91.16 5.15 1.00 1 2 829.89801 1658.78874 -1.71 33.65 7554 7554 MS2 18/28 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 117.76 5.14 1.00 1 2 799.88171 1598.75615 -1.91 29.58 6111 6111 MS2 19/32 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 134.97 5.12 1.00 1 2 799.88147 1598.75566 -2.22 29.42 3187 3187 MS2 17/32 Linfeng_091611_rIgG_2.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 108.06 5.12 1.00 1 2 799.88214 1598.75701 -1.38 30.65 6515 6515 MS2 16/32 Linfeng_081211_IgG_3.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 61.38 5.07 1.00 1 2 718.36926 1435.73125 -5.25 23.85 2662 2662 MS2 25/32 Linfeng_091811_SIN3A_5.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 126.81 5.04 1.00 1 2 799.88153 1598.75578 -2.14 29.31 3165 3165 MS2 19/32 Linfeng_091611_rIgG_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR 8 0 CID "M10(Oxidation), M23(Oxidation)" 77.33 5.00 1.00 1 3 1024.13916 3070.40293 -2.09 34.43 3838 3838 MS2 26/104 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 136.18 4.98 1.00 1 3 806.75684 2418.25595 1.97 54.37 6371 6371 MS2 35/80 Linfeng_091611_rIgG_1.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 48.47 4.97 1.00 1 2 718.37097 1435.73467 -2.87 24.31 4504 4504 MS2 20/32 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 64.42 4.96 1.00 1 3 630.99384 1890.96695 -2.09 47.50 5805 5805 MS2 22/56 Linfeng_091611_rIgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 77.00 4.96 1.00 1 3 630.99408 1890.96769 -1.70 47.32 5693 5693 MS2 25/56 Linfeng_091611_rIgG_4.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 68.10 4.94 1.00 1 2 799.88184 1598.75640 -1.76 37.27 5509 5509 MS2 18/32 Linfeng_081211_IgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 96.56 4.89 1.00 1 2 799.88324 1598.75920 0.00 29.69 6017 6017 MS2 18/32 Linfeng_081211_IgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 57.01 4.80 1.00 1 3 630.99500 1890.97043 -0.25 48.02 11597 11597 MS2 23/56 Linfeng_081211_IgG_8.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 35.95 4.79 1.00 1 3 453.24686 1357.72602 -4.58 30.67 3455 3455 MS2 26/44 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 72.81 4.79 1.00 1 3 630.99500 1890.97043 -0.25 47.93 5684 5684 MS2 25/56 Linfeng_091811_SIN3A_6.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 117.33 4.78 1.00 1 2 799.88214 1598.75701 -1.38 29.32 2956 2956 MS2 17/32 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 99.41 4.78 1.00 1 2 799.88177 1598.75627 -1.83 30.05 6068 6068 MS2 16/32 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 146.12 4.77 1.00 1 3 806.75592 2418.25321 0.83 54.58 6282 6282 MS2 34/80 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 135.04 4.76 1.00 1 3 806.75714 2418.25687 2.34 54.43 6475 6475 MS2 27/80 Linfeng_091611_rIgG_6.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 31.97 4.75 1.00 1 3 453.24667 1357.72547 -4.99 30.64 3595 3595 MS2 25/44 Linfeng_091811_SIN3A_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.86 4.71 1.00 1 2 799.88220 1598.75713 -1.30 29.95 5920 5920 MS2 15/32 Linfeng_081211_IgG_5.raw High QNLEPLFEQYINNLR 10 0 CID 58.23 4.70 1.00 1 3 630.99518 1890.97098 0.04 47.46 5245 5245 MS2 27/56 Linfeng_091611_rIgG_10.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 47.78 4.70 1.00 1 2 718.37238 1435.73747 -0.92 24.68 4393 4393 MS2 17/32 Linfeng_081211_IgG_4.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 80.23 4.67 1.00 1 2 718.37164 1435.73601 -1.94 25.60 4847 4847 MS2 20/32 Linfeng_081211_IgG_3.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.55 4.67 1.00 1 2 799.88300 1598.75871 -0.31 29.84 6002 6002 MS2 19/32 Linfeng_081211_IgG_4.raw High NKLEGLEDALQK 8 0 CID 20.89 4.56 1.00 1 3 453.24762 1357.72831 -2.90 30.46 3316 3316 MS2 27/44 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 300.00 4.46 1.00 1 3 806.75665 2418.25541 1.74 54.54 6680 6680 MS2 32/80 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 37.89 4.43 1.00 1 3 485.89963 1455.68433 -1.37 23.88 4355 4355 MS2 21/44 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 99.03 4.43 1.00 1 2 945.98785 1890.96843 -1.31 47.67 5651 5651 MS2 19/28 Linfeng_091811_SIN3A_1.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 75.52 4.42 1.00 1 2 718.37170 1435.73613 -1.85 25.85 4563 4563 MS2 20/32 Linfeng_081211_IgG_2.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 100.10 4.41 1.00 1 2 829.90039 1658.79350 1.16 34.63 8002 8002 MS2 20/28 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 66.89 4.38 1.00 1 3 630.99481 1890.96988 -0.54 47.86 5457 5457 MS2 23/56 Linfeng_091811_SIN3A_7.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 56.12 4.35 1.00 1 2 583.29407 1165.58086 -3.40 26.84 5068 5068 MS2 17/18 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High GSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C9(Carbamidomethyl) 82.55 4.27 1.00 1 2 712.81958 1424.63188 -1.23 31.20 4357 4357 MS2 16/32 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.72 4.23 1.00 1 2 583.29358 1165.57988 -4.24 26.40 5121 5121 MS2 14/18 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 53.20 4.20 1.00 1 2 679.37042 1357.73357 0.98 31.33 6525 6525 MS2 16/22 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 28.26 4.19 1.00 1 2 679.36829 1357.72930 -2.17 31.35 6745 6745 MS2 16/22 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.99 4.17 1.00 1 2 583.29352 1165.57976 -4.34 26.65 5060 5060 MS2 16/18 Linfeng_081211_IgG_10.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 68.63 4.14 1.00 1 2 679.36829 1357.72930 -2.17 30.87 6275 6275 MS2 18/22 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 8.29 4.13 1.00 1 3 533.59106 1598.75864 -0.35 29.97 6044 6044 MS2 18/64 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 54.00 4.10 1.00 1 2 583.29468 1165.58208 -2.35 27.93 5205 5205 MS2 17/18 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 65.02 4.09 1.00 1 2 583.29437 1165.58147 -2.88 27.59 5486 5486 MS2 16/18 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1 9 2 CID 67.92 4.09 1.00 1 2 583.29114 1165.57500 -8.43 26.17 2983 2983 MS2 17/18 Linfeng_091811_SIN3A_5.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 51.88 3.98 1.00 1 2 799.88312 1598.75896 -0.15 31.00 6028 6028 MS2 12/32 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.00 3.94 1.00 1 2 583.29419 1165.58110 -3.19 26.98 5071 5071 MS2 16/18 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 18.50 3.89 1.00 1 2 728.34546 1455.68364 -1.85 23.94 4379 4379 MS2 13/22 Linfeng_081211_IgG_8.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 59.30 3.86 1.00 1 2 583.29407 1165.58086 -3.40 26.98 4910 4910 MS2 17/18 Linfeng_081211_IgG_5.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 34.21 3.86 1.00 1 2 728.34619 1455.68511 -0.84 24.25 4136 4136 MS2 14/22 Linfeng_081211_IgG_5.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 37.40 3.80 1.00 1 2 513.76355 1026.51982 -1.63 29.17 5952 5952 MS2 15/18 Linfeng_081211_IgG_3.raw High LEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 41.73 3.79 1.00 1 2 558.30035 1115.59343 -0.82 40.44 6338 6338 MS2 16/18 Linfeng_081211_IgG_1.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 47.00 3.77 1.00 1 2 829.89850 1658.78972 -1.12 33.81 7320 7320 MS2 14/28 Linfeng_081211_IgG_4.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 62.83 3.76 1.00 1 2 606.77863 1212.54997 -2.64 26.79 5043 5043 MS2 15/18 Linfeng_081211_IgG_7.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 40.93 3.75 1.00 1 2 583.29474 1165.58220 -2.25 33.05 4712 4712 MS2 16/18 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 76.43 3.70 1.00 1 2 606.77856 1212.54985 -2.75 26.97 4905 4905 MS2 15/18 Linfeng_081211_IgG_5.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 41.50 3.67 1.00 1 2 513.76379 1026.52031 -1.15 29.45 5557 5557 MS2 15/18 Linfeng_081211_IgG_2.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.06 3.66 1.00 1 2 583.29407 1165.58086 -3.40 26.61 5055 5055 MS2 17/18 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 57.56 3.64 1.00 1 2 606.77875 1212.55022 -2.44 27.31 5439 5439 MS2 15/18 Linfeng_081211_IgG_3.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 50.12 3.64 1.00 1 2 829.89948 1658.79167 0.06 33.99 7480 7480 MS2 11/28 Linfeng_081211_IgG_6.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 29.12 3.62 1.00 1 2 602.32135 1203.63542 -1.19 42.71 6992 6992 MS2 17/18 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 65.44 3.61 1.00 1 2 945.98969 1890.97209 0.63 48.10 11610 11610 MS2 15/28 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 44.30 3.60 1.00 1 2 602.32190 1203.63652 -0.28 33.25 7208 7208 MS2 14/18 Linfeng_081211_IgG_7.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 44.63 3.53 1.00 1 2 728.34656 1455.68584 -0.34 24.42 4294 4294 MS2 13/22 Linfeng_081211_IgG_4.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 52.73 3.50 1.00 1 2 513.76306 1026.51885 -2.58 27.99 5454 5454 MS2 14/18 Linfeng_081211_IgG_10.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw IPI:IPI00956313.1 542 58.3 8.00 58 kDa protein 40.96 144 21 1094.18 35.61 73 18 1045.54 22.14 34 8 811.77 27.49 37 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALYDAELSQmQTHISDTSVVLSmDNNR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID "M10(Oxidation), M23(Oxidation)" 89.24 7.34 1.00 1 3 1024.13904 3070.40256 -2.21 34.43 4103 4103 MS2 38/104 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 106.21 6.20 1.00 1 4 605.31854 2418.25234 0.47 54.58 6405 6405 MS2 43/120 Linfeng_091811_SIN3A_6.raw High SRGSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C11(Carbamidomethyl) 38.71 6.18 1.00 1 3 556.59198 1667.76139 -3.24 22.36 2252 2252 MS2 32/72 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 139.38 6.09 1.00 1 4 605.31946 2418.25600 1.99 54.60 6284 6284 MS2 43/120 Linfeng_091811_SIN3A_9.raw High QNLEPLFEQYINNLR 10 0 CID 53.05 6.04 1.00 1 3 630.99329 1890.96531 -2.96 47.34 5070 5070 MS2 26/56 Linfeng_091611_rIgG_3.raw High QNLEPLFEQYINNLR 10 0 CID 71.16 5.95 1.00 1 3 630.99408 1890.96769 -1.70 47.49 5476 5476 MS2 26/56 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 102.49 5.86 1.00 1 4 605.31946 2418.25600 1.99 54.41 6376 6376 MS2 41/120 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 57.50 5.86 1.00 1 3 630.99371 1890.96659 -2.28 47.69 5658 5658 MS2 26/56 Linfeng_091811_SIN3A_3.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 55.54 5.84 1.00 1 3 630.99359 1890.96622 -2.48 47.68 5625 5625 MS2 27/56 Linfeng_091811_SIN3A_2.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 102.41 5.82 1.00 1 2 724.38855 1447.76982 -3.70 27.97 2890 2890 MS2 25/32 Linfeng_091811_SIN3A_7.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 61.49 5.78 1.00 1 3 630.99561 1890.97226 0.72 47.71 5843 5843 MS2 28/56 Linfeng_091811_SIN3A_5.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 103.66 5.75 1.00 1 2 724.38800 1447.76872 -4.46 27.88 3219 3219 MS2 25/32 Linfeng_091811_SIN3A_5.raw High QNLEPLFEQYINNLR 10 0 CID 67.64 5.67 1.00 1 3 630.99402 1890.96750 -1.80 47.26 5499 5499 MS2 24/56 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 66.23 5.67 1.00 1 3 630.99329 1890.96531 -2.96 47.33 5477 5477 MS2 25/56 Linfeng_091611_rIgG_2.raw High AIGGGLSSVGGGSSTIK 6 0 CID 109.84 5.67 1.00 1 2 724.38873 1447.77019 -3.45 27.71 2960 2960 MS2 26/32 Linfeng_091611_rIgG_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 75.04 5.66 1.00 1 3 630.99408 1890.96769 -1.70 47.59 5641 5641 MS2 28/56 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 91.81 5.59 1.00 1 2 724.38824 1447.76921 -4.12 27.99 3116 3116 MS2 21/32 Linfeng_091811_SIN3A_6.raw High AIGGGLSSVGGGSSTIK 6 0 CID 100.30 5.56 1.00 1 2 724.38898 1447.77068 -3.11 27.62 2944 2944 MS2 25/32 Linfeng_091611_rIgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 112.94 5.43 1.00 1 2 799.88080 1598.75432 -3.06 29.46 3293 3293 MS2 21/32 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK 6 0 CID 118.56 5.39 1.00 1 2 724.38867 1447.77007 -3.53 27.69 2950 2950 MS2 23/32 Linfeng_091611_rIgG_9.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 120.07 5.37 1.00 1 2 724.38812 1447.76897 -4.29 27.75 3059 3059 MS2 25/32 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 114.66 5.29 1.00 1 2 724.38959 1447.77190 -2.27 29.41 6044 6044 MS2 23/32 Linfeng_081211_IgG_3.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 106.66 5.21 1.00 1 2 724.38867 1447.77007 -3.53 27.93 3008 3008 MS2 24/32 Linfeng_091811_SIN3A_9.raw High AIGGGLSSVGGGSSTIK 6 0 CID 75.85 5.20 1.00 1 2 724.39008 1447.77287 -1.59 27.68 2740 2740 MS2 20/32 Linfeng_091611_rIgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 42.47 5.19 1.00 1 3 630.99548 1890.97190 0.53 47.08 11097 11097 MS2 23/56 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 86.81 5.19 1.00 1 2 799.88031 1598.75334 -3.67 29.62 3240 3240 MS2 15/32 Linfeng_091811_SIN3A_9.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 107.94 5.16 1.00 1 2 799.88336 1598.75945 0.15 29.84 6066 6066 MS2 17/32 Linfeng_081211_IgG_6.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 117.76 5.14 1.00 1 2 799.88171 1598.75615 -1.91 29.58 6111 6111 MS2 19/32 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 134.97 5.12 1.00 1 2 799.88147 1598.75566 -2.22 29.42 3187 3187 MS2 17/32 Linfeng_091611_rIgG_2.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 108.06 5.12 1.00 1 2 799.88214 1598.75701 -1.38 30.65 6515 6515 MS2 16/32 Linfeng_081211_IgG_3.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 126.81 5.04 1.00 1 2 799.88153 1598.75578 -2.14 29.31 3165 3165 MS2 19/32 Linfeng_091611_rIgG_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR 8 0 CID "M10(Oxidation), M23(Oxidation)" 77.33 5.00 1.00 1 3 1024.13916 3070.40293 -2.09 34.43 3838 3838 MS2 26/104 Linfeng_091611_rIgG_2.raw High AIGGGLSSVGGGSSTIK 6 0 CID 98.64 4.98 1.00 1 2 724.38849 1447.76970 -3.79 27.63 2571 2571 MS2 22/32 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 136.18 4.98 1.00 1 3 806.75684 2418.25595 1.97 54.37 6371 6371 MS2 35/80 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 64.42 4.96 1.00 1 3 630.99384 1890.96695 -2.09 47.50 5805 5805 MS2 22/56 Linfeng_091611_rIgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 77.00 4.96 1.00 1 3 630.99408 1890.96769 -1.70 47.32 5693 5693 MS2 25/56 Linfeng_091611_rIgG_4.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 56.40 4.96 1.00 1 2 724.39001 1447.77275 -1.68 28.49 5392 5392 MS2 22/32 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 68.10 4.94 1.00 1 2 799.88184 1598.75640 -1.76 37.27 5509 5509 MS2 18/32 Linfeng_081211_IgG_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 51.53 4.91 1.00 1 2 724.39081 1447.77434 -0.58 37.86 5614 5614 MS2 20/32 Linfeng_081211_IgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 96.56 4.89 1.00 1 2 799.88324 1598.75920 0.00 29.69 6017 6017 MS2 18/32 Linfeng_081211_IgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 57.01 4.80 1.00 1 3 630.99500 1890.97043 -0.25 48.02 11597 11597 MS2 23/56 Linfeng_081211_IgG_8.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 35.95 4.79 1.00 1 3 453.24686 1357.72602 -4.58 30.67 3455 3455 MS2 26/44 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 72.81 4.79 1.00 1 3 630.99500 1890.97043 -0.25 47.93 5684 5684 MS2 25/56 Linfeng_091811_SIN3A_6.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 117.33 4.78 1.00 1 2 799.88214 1598.75701 -1.38 29.32 2956 2956 MS2 17/32 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 99.41 4.78 1.00 1 2 799.88177 1598.75627 -1.83 30.05 6068 6068 MS2 16/32 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 146.12 4.77 1.00 1 3 806.75592 2418.25321 0.83 54.58 6282 6282 MS2 34/80 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 135.04 4.76 1.00 1 3 806.75714 2418.25687 2.34 54.43 6475 6475 MS2 27/80 Linfeng_091611_rIgG_6.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 31.97 4.75 1.00 1 3 453.24667 1357.72547 -4.99 30.64 3595 3595 MS2 25/44 Linfeng_091811_SIN3A_5.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 71.47 4.73 1.00 1 2 724.39001 1447.77275 -1.68 28.42 5575 5575 MS2 19/32 Linfeng_081211_IgG_6.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.86 4.71 1.00 1 2 799.88220 1598.75713 -1.30 29.95 5920 5920 MS2 15/32 Linfeng_081211_IgG_5.raw High QNLEPLFEQYINNLR 10 0 CID 58.23 4.70 1.00 1 3 630.99518 1890.97098 0.04 47.46 5245 5245 MS2 27/56 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.55 4.67 1.00 1 2 799.88300 1598.75871 -0.31 29.84 6002 6002 MS2 19/32 Linfeng_081211_IgG_4.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 65.92 4.58 1.00 1 2 724.39050 1447.77373 -1.00 29.65 5619 5619 MS2 22/32 Linfeng_081211_IgG_2.raw High NKLEGLEDALQK 8 0 CID 20.89 4.56 1.00 1 3 453.24762 1357.72831 -2.90 30.46 3316 3316 MS2 27/44 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 300.00 4.46 1.00 1 3 806.75665 2418.25541 1.74 54.54 6680 6680 MS2 32/80 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 37.89 4.43 1.00 1 3 485.89963 1455.68433 -1.37 23.88 4355 4355 MS2 21/44 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 99.03 4.43 1.00 1 2 945.98785 1890.96843 -1.31 47.67 5651 5651 MS2 19/28 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 66.89 4.38 1.00 1 3 630.99481 1890.96988 -0.54 47.86 5457 5457 MS2 23/56 Linfeng_091811_SIN3A_7.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 87.31 4.38 1.00 1 2 724.38989 1447.77251 -1.85 28.35 5494 5494 MS2 19/32 Linfeng_081211_IgG_4.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 56.12 4.35 1.00 1 2 583.29407 1165.58086 -3.40 26.84 5068 5068 MS2 17/18 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High GSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C9(Carbamidomethyl) 82.55 4.27 1.00 1 2 712.81958 1424.63188 -1.23 31.20 4357 4357 MS2 16/32 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.72 4.23 1.00 1 2 583.29358 1165.57988 -4.24 26.40 5121 5121 MS2 14/18 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 53.20 4.20 1.00 1 2 679.37042 1357.73357 0.98 31.33 6525 6525 MS2 16/22 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 28.26 4.19 1.00 1 2 679.36829 1357.72930 -2.17 31.35 6745 6745 MS2 16/22 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.99 4.17 1.00 1 2 583.29352 1165.57976 -4.34 26.65 5060 5060 MS2 16/18 Linfeng_081211_IgG_10.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 68.63 4.14 1.00 1 2 679.36829 1357.72930 -2.17 30.87 6275 6275 MS2 18/22 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 8.29 4.13 1.00 1 3 533.59106 1598.75864 -0.35 29.97 6044 6044 MS2 18/64 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 54.00 4.10 1.00 1 2 583.29468 1165.58208 -2.35 27.93 5205 5205 MS2 17/18 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 65.02 4.09 1.00 1 2 583.29437 1165.58147 -2.88 27.59 5486 5486 MS2 16/18 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1 9 2 CID 67.92 4.09 1.00 1 2 583.29114 1165.57500 -8.43 26.17 2983 2983 MS2 17/18 Linfeng_091811_SIN3A_5.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 71.79 4.00 1.00 1 2 704.35925 1407.71123 -0.19 41.44 9976 9976 MS2 17/22 Linfeng_081211_IgG_8.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 43.33 4.00 1.00 1 2 724.38995 1447.77263 -1.76 28.52 5533 5533 MS2 19/32 Linfeng_081211_IgG_7.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 51.88 3.98 1.00 1 2 799.88312 1598.75896 -0.15 31.00 6028 6028 MS2 12/32 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.00 3.94 1.00 1 2 583.29419 1165.58110 -3.19 26.98 5071 5071 MS2 16/18 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 18.50 3.89 1.00 1 2 728.34546 1455.68364 -1.85 23.94 4379 4379 MS2 13/22 Linfeng_081211_IgG_8.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 53.64 3.89 1.00 1 2 704.36151 1407.71575 3.02 42.35 10656 10656 MS2 17/22 Linfeng_081211_IgG_3.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 67.49 3.88 1.00 1 2 704.35974 1407.71221 0.50 41.99 10006 10006 MS2 17/22 Linfeng_081211_IgG_6.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 59.30 3.86 1.00 1 2 583.29407 1165.58086 -3.40 26.98 4910 4910 MS2 17/18 Linfeng_081211_IgG_5.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 34.21 3.86 1.00 1 2 728.34619 1455.68511 -0.84 24.25 4136 4136 MS2 14/22 Linfeng_081211_IgG_5.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 37.40 3.80 1.00 1 2 513.76355 1026.51982 -1.63 29.17 5952 5952 MS2 15/18 Linfeng_081211_IgG_3.raw High LEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 41.73 3.79 1.00 1 2 558.30035 1115.59343 -0.82 40.44 6338 6338 MS2 16/18 Linfeng_081211_IgG_1.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 57.71 3.78 1.00 1 2 704.36157 1407.71587 3.10 41.60 10019 10019 MS2 17/22 Linfeng_081211_IgG_7.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 62.83 3.76 1.00 1 2 606.77863 1212.54997 -2.64 26.79 5043 5043 MS2 15/18 Linfeng_081211_IgG_7.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 40.93 3.75 1.00 1 2 583.29474 1165.58220 -2.25 33.05 4712 4712 MS2 16/18 Linfeng_081211_IgG_1.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 49.97 3.73 1.00 1 2 704.35919 1407.71111 -0.28 47.67 8451 8451 MS2 17/22 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 76.43 3.70 1.00 1 2 606.77856 1212.54985 -2.75 26.97 4905 4905 MS2 15/18 Linfeng_081211_IgG_5.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 41.50 3.67 1.00 1 2 513.76379 1026.52031 -1.15 29.45 5557 5557 MS2 15/18 Linfeng_081211_IgG_2.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.06 3.66 1.00 1 2 583.29407 1165.58086 -3.40 26.61 5055 5055 MS2 17/18 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 57.56 3.64 1.00 1 2 606.77875 1212.55022 -2.44 27.31 5439 5439 MS2 15/18 Linfeng_081211_IgG_3.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 56.03 3.62 1.00 1 2 704.35797 1407.70867 -2.01 41.34 9563 9563 MS2 18/22 Linfeng_081211_IgG_5.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 29.12 3.62 1.00 1 2 602.32135 1203.63542 -1.19 42.71 6992 6992 MS2 17/18 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 65.44 3.61 1.00 1 2 945.98969 1890.97209 0.63 48.10 11610 11610 MS2 15/28 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 44.30 3.60 1.00 1 2 602.32190 1203.63652 -0.28 33.25 7208 7208 MS2 14/18 Linfeng_081211_IgG_7.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 44.63 3.53 1.00 1 2 728.34656 1455.68584 -0.34 24.42 4294 4294 MS2 13/22 Linfeng_081211_IgG_4.raw High DVDAAYmNK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00793641.1;IPI:IPI00909059.5;IPI:IPI00956313.1 15 5 CID M7(Oxidation) 39.94 3.51 1.00 1 2 521.72980 1042.45232 1.23 20.17 2089 2089 MS2 13/16 Linfeng_081211_IgG_1.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 52.73 3.50 1.00 1 2 513.76306 1026.51885 -2.58 27.99 5454 5454 MS2 14/18 Linfeng_081211_IgG_10.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw High TAAENEFVTLK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00942512.1;IPI:IPI00956313.1 9 4 CID 43.81 3.46 1.00 1 2 611.81824 1222.62920 -1.84 30.62 6487 6487 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00909059.5 535 57.8 8.00 "cDNA FLJ53910, highly similar to Keratin, type II cytoskeletal 6A" 46.17 153 23 1129.58 40.75 82 20 1056.91 22.43 34 8 805.85 27.85 37 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALYDAELSQmQTHISDTSVVLSmDNNR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID "M10(Oxidation), M23(Oxidation)" 89.24 7.34 1.00 1 3 1024.13904 3070.40256 -2.21 34.43 4103 4103 MS2 38/104 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 106.21 6.20 1.00 1 4 605.31854 2418.25234 0.47 54.58 6405 6405 MS2 43/120 Linfeng_091811_SIN3A_6.raw High SRGSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C11(Carbamidomethyl) 38.71 6.18 1.00 1 3 556.59198 1667.76139 -3.24 22.36 2252 2252 MS2 32/72 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 139.38 6.09 1.00 1 4 605.31946 2418.25600 1.99 54.60 6284 6284 MS2 43/120 Linfeng_091811_SIN3A_9.raw High QNLEPLFEQYINNLR 10 0 CID 53.05 6.04 1.00 1 3 630.99329 1890.96531 -2.96 47.34 5070 5070 MS2 26/56 Linfeng_091611_rIgG_3.raw High QNLEPLFEQYINNLR 10 0 CID 71.16 5.95 1.00 1 3 630.99408 1890.96769 -1.70 47.49 5476 5476 MS2 26/56 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 102.49 5.86 1.00 1 4 605.31946 2418.25600 1.99 54.41 6376 6376 MS2 41/120 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 57.50 5.86 1.00 1 3 630.99371 1890.96659 -2.28 47.69 5658 5658 MS2 26/56 Linfeng_091811_SIN3A_3.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 55.54 5.84 1.00 1 3 630.99359 1890.96622 -2.48 47.68 5625 5625 MS2 27/56 Linfeng_091811_SIN3A_2.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 102.41 5.82 1.00 1 2 724.38855 1447.76982 -3.70 27.97 2890 2890 MS2 25/32 Linfeng_091811_SIN3A_7.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 61.49 5.78 1.00 1 3 630.99561 1890.97226 0.72 47.71 5843 5843 MS2 28/56 Linfeng_091811_SIN3A_5.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 103.66 5.75 1.00 1 2 724.38800 1447.76872 -4.46 27.88 3219 3219 MS2 25/32 Linfeng_091811_SIN3A_5.raw High QNLEPLFEQYINNLR 10 0 CID 67.64 5.67 1.00 1 3 630.99402 1890.96750 -1.80 47.26 5499 5499 MS2 24/56 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 66.23 5.67 1.00 1 3 630.99329 1890.96531 -2.96 47.33 5477 5477 MS2 25/56 Linfeng_091611_rIgG_2.raw High AIGGGLSSVGGGSSTIK 6 0 CID 109.84 5.67 1.00 1 2 724.38873 1447.77019 -3.45 27.71 2960 2960 MS2 26/32 Linfeng_091611_rIgG_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 75.04 5.66 1.00 1 3 630.99408 1890.96769 -1.70 47.59 5641 5641 MS2 28/56 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 91.81 5.59 1.00 1 2 724.38824 1447.76921 -4.12 27.99 3116 3116 MS2 21/32 Linfeng_091811_SIN3A_6.raw High AIGGGLSSVGGGSSTIK 6 0 CID 100.30 5.56 1.00 1 2 724.38898 1447.77068 -3.11 27.62 2944 2944 MS2 25/32 Linfeng_091611_rIgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 112.94 5.43 1.00 1 2 799.88080 1598.75432 -3.06 29.46 3293 3293 MS2 21/32 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK 6 0 CID 118.56 5.39 1.00 1 2 724.38867 1447.77007 -3.53 27.69 2950 2950 MS2 23/32 Linfeng_091611_rIgG_9.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 120.07 5.37 1.00 1 2 724.38812 1447.76897 -4.29 27.75 3059 3059 MS2 25/32 Linfeng_091811_SIN3A_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 114.66 5.29 1.00 1 2 724.38959 1447.77190 -2.27 29.41 6044 6044 MS2 23/32 Linfeng_081211_IgG_3.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5 6 1 CID 106.66 5.21 1.00 1 2 724.38867 1447.77007 -3.53 27.93 3008 3008 MS2 24/32 Linfeng_091811_SIN3A_9.raw High AIGGGLSSVGGGSSTIK 6 0 CID 75.85 5.20 1.00 1 2 724.39008 1447.77287 -1.59 27.68 2740 2740 MS2 20/32 Linfeng_091611_rIgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 42.47 5.19 1.00 1 3 630.99548 1890.97190 0.53 47.08 11097 11097 MS2 23/56 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 86.81 5.19 1.00 1 2 799.88031 1598.75334 -3.67 29.62 3240 3240 MS2 15/32 Linfeng_091811_SIN3A_9.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 96.40 5.18 1.00 1 2 829.89722 1658.78716 -2.66 33.79 7286 7286 MS2 21/28 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 107.94 5.16 1.00 1 2 799.88336 1598.75945 0.15 29.84 6066 6066 MS2 17/32 Linfeng_081211_IgG_6.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 91.16 5.15 1.00 1 2 829.89801 1658.78874 -1.71 33.65 7554 7554 MS2 18/28 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 117.76 5.14 1.00 1 2 799.88171 1598.75615 -1.91 29.58 6111 6111 MS2 19/32 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 134.97 5.12 1.00 1 2 799.88147 1598.75566 -2.22 29.42 3187 3187 MS2 17/32 Linfeng_091611_rIgG_2.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 108.06 5.12 1.00 1 2 799.88214 1598.75701 -1.38 30.65 6515 6515 MS2 16/32 Linfeng_081211_IgG_3.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 126.81 5.04 1.00 1 2 799.88153 1598.75578 -2.14 29.31 3165 3165 MS2 19/32 Linfeng_091611_rIgG_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR 8 0 CID "M10(Oxidation), M23(Oxidation)" 77.33 5.00 1.00 1 3 1024.13916 3070.40293 -2.09 34.43 3838 3838 MS2 26/104 Linfeng_091611_rIgG_2.raw High AIGGGLSSVGGGSSTIK 6 0 CID 98.64 4.98 1.00 1 2 724.38849 1447.76970 -3.79 27.63 2571 2571 MS2 22/32 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 136.18 4.98 1.00 1 3 806.75684 2418.25595 1.97 54.37 6371 6371 MS2 35/80 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 64.42 4.96 1.00 1 3 630.99384 1890.96695 -2.09 47.50 5805 5805 MS2 22/56 Linfeng_091611_rIgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 77.00 4.96 1.00 1 3 630.99408 1890.96769 -1.70 47.32 5693 5693 MS2 25/56 Linfeng_091611_rIgG_4.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 56.40 4.96 1.00 1 2 724.39001 1447.77275 -1.68 28.49 5392 5392 MS2 22/32 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 68.10 4.94 1.00 1 2 799.88184 1598.75640 -1.76 37.27 5509 5509 MS2 18/32 Linfeng_081211_IgG_1.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 51.53 4.91 1.00 1 2 724.39081 1447.77434 -0.58 37.86 5614 5614 MS2 20/32 Linfeng_081211_IgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 96.56 4.89 1.00 1 2 799.88324 1598.75920 0.00 29.69 6017 6017 MS2 18/32 Linfeng_081211_IgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 57.01 4.80 1.00 1 3 630.99500 1890.97043 -0.25 48.02 11597 11597 MS2 23/56 Linfeng_081211_IgG_8.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 35.95 4.79 1.00 1 3 453.24686 1357.72602 -4.58 30.67 3455 3455 MS2 26/44 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 72.81 4.79 1.00 1 3 630.99500 1890.97043 -0.25 47.93 5684 5684 MS2 25/56 Linfeng_091811_SIN3A_6.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 117.33 4.78 1.00 1 2 799.88214 1598.75701 -1.38 29.32 2956 2956 MS2 17/32 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 99.41 4.78 1.00 1 2 799.88177 1598.75627 -1.83 30.05 6068 6068 MS2 16/32 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 146.12 4.77 1.00 1 3 806.75592 2418.25321 0.83 54.58 6282 6282 MS2 34/80 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 135.04 4.76 1.00 1 3 806.75714 2418.25687 2.34 54.43 6475 6475 MS2 27/80 Linfeng_091611_rIgG_6.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 31.97 4.75 1.00 1 3 453.24667 1357.72547 -4.99 30.64 3595 3595 MS2 25/44 Linfeng_091811_SIN3A_5.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 71.47 4.73 1.00 1 2 724.39001 1447.77275 -1.68 28.42 5575 5575 MS2 19/32 Linfeng_081211_IgG_6.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.86 4.71 1.00 1 2 799.88220 1598.75713 -1.30 29.95 5920 5920 MS2 15/32 Linfeng_081211_IgG_5.raw High QNLEPLFEQYINNLR 10 0 CID 58.23 4.70 1.00 1 3 630.99518 1890.97098 0.04 47.46 5245 5245 MS2 27/56 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.55 4.67 1.00 1 2 799.88300 1598.75871 -0.31 29.84 6002 6002 MS2 19/32 Linfeng_081211_IgG_4.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 65.92 4.58 1.00 1 2 724.39050 1447.77373 -1.00 29.65 5619 5619 MS2 22/32 Linfeng_081211_IgG_2.raw High NKLEGLEDALQK 8 0 CID 20.89 4.56 1.00 1 3 453.24762 1357.72831 -2.90 30.46 3316 3316 MS2 27/44 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 300.00 4.46 1.00 1 3 806.75665 2418.25541 1.74 54.54 6680 6680 MS2 32/80 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 37.89 4.43 1.00 1 3 485.89963 1455.68433 -1.37 23.88 4355 4355 MS2 21/44 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 99.03 4.43 1.00 1 2 945.98785 1890.96843 -1.31 47.67 5651 5651 MS2 19/28 Linfeng_091811_SIN3A_1.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 100.10 4.41 1.00 1 2 829.90039 1658.79350 1.16 34.63 8002 8002 MS2 20/28 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 66.89 4.38 1.00 1 3 630.99481 1890.96988 -0.54 47.86 5457 5457 MS2 23/56 Linfeng_091811_SIN3A_7.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 87.31 4.38 1.00 1 2 724.38989 1447.77251 -1.85 28.35 5494 5494 MS2 19/32 Linfeng_081211_IgG_4.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 56.12 4.35 1.00 1 2 583.29407 1165.58086 -3.40 26.84 5068 5068 MS2 17/18 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High GSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C9(Carbamidomethyl) 82.55 4.27 1.00 1 2 712.81958 1424.63188 -1.23 31.20 4357 4357 MS2 16/32 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.72 4.23 1.00 1 2 583.29358 1165.57988 -4.24 26.40 5121 5121 MS2 14/18 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 53.20 4.20 1.00 1 2 679.37042 1357.73357 0.98 31.33 6525 6525 MS2 16/22 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 28.26 4.19 1.00 1 2 679.36829 1357.72930 -2.17 31.35 6745 6745 MS2 16/22 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.99 4.17 1.00 1 2 583.29352 1165.57976 -4.34 26.65 5060 5060 MS2 16/18 Linfeng_081211_IgG_10.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 68.63 4.14 1.00 1 2 679.36829 1357.72930 -2.17 30.87 6275 6275 MS2 18/22 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 8.29 4.13 1.00 1 3 533.59106 1598.75864 -0.35 29.97 6044 6044 MS2 18/64 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 54.00 4.10 1.00 1 2 583.29468 1165.58208 -2.35 27.93 5205 5205 MS2 17/18 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 65.02 4.09 1.00 1 2 583.29437 1165.58147 -2.88 27.59 5486 5486 MS2 16/18 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1 9 2 CID 67.92 4.09 1.00 1 2 583.29114 1165.57500 -8.43 26.17 2983 2983 MS2 17/18 Linfeng_091811_SIN3A_5.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 71.79 4.00 1.00 1 2 704.35925 1407.71123 -0.19 41.44 9976 9976 MS2 17/22 Linfeng_081211_IgG_8.raw High AIGGGLSSVGGGSSTIK IPI:IPI00909059.5;IPI:IPI00956313.1 6 2 CID 43.33 4.00 1.00 1 2 724.38995 1447.77263 -1.76 28.52 5533 5533 MS2 19/32 Linfeng_081211_IgG_7.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 51.88 3.98 1.00 1 2 799.88312 1598.75896 -0.15 31.00 6028 6028 MS2 12/32 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 52.00 3.94 1.00 1 2 583.29419 1165.58110 -3.19 26.98 5071 5071 MS2 16/18 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 18.50 3.89 1.00 1 2 728.34546 1455.68364 -1.85 23.94 4379 4379 MS2 13/22 Linfeng_081211_IgG_8.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 53.64 3.89 1.00 1 2 704.36151 1407.71575 3.02 42.35 10656 10656 MS2 17/22 Linfeng_081211_IgG_3.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 67.49 3.88 1.00 1 2 704.35974 1407.71221 0.50 41.99 10006 10006 MS2 17/22 Linfeng_081211_IgG_6.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 59.30 3.86 1.00 1 2 583.29407 1165.58086 -3.40 26.98 4910 4910 MS2 17/18 Linfeng_081211_IgG_5.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 34.21 3.86 1.00 1 2 728.34619 1455.68511 -0.84 24.25 4136 4136 MS2 14/22 Linfeng_081211_IgG_5.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 52.49 3.83 1.00 1 2 506.75528 1012.50328 -2.53 26.24 5070 5070 MS2 15/18 Linfeng_081211_IgG_3.raw High LEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 41.73 3.79 1.00 1 2 558.30035 1115.59343 -0.82 40.44 6338 6338 MS2 16/18 Linfeng_081211_IgG_1.raw High GmQDLVEDFK IPI:IPI00909059.5 3 1 CID M2(Oxidation) 43.25 3.79 1.00 1 2 599.27631 1197.54534 -0.29 32.05 6799 6799 MS2 15/18 Linfeng_081211_IgG_6.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 57.27 3.79 1.00 1 2 506.75562 1012.50395 -1.86 25.03 4713 4713 MS2 16/18 Linfeng_081211_IgG_8.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 57.71 3.78 1.00 1 2 704.36157 1407.71587 3.10 41.60 10019 10019 MS2 17/22 Linfeng_081211_IgG_7.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 47.00 3.77 1.00 1 2 829.89850 1658.78972 -1.12 33.81 7320 7320 MS2 14/28 Linfeng_081211_IgG_4.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 62.83 3.76 1.00 1 2 606.77863 1212.54997 -2.64 26.79 5043 5043 MS2 15/18 Linfeng_081211_IgG_7.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 40.93 3.75 1.00 1 2 583.29474 1165.58220 -2.25 33.05 4712 4712 MS2 16/18 Linfeng_081211_IgG_1.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 49.97 3.73 1.00 1 2 704.35919 1407.71111 -0.28 47.67 8451 8451 MS2 17/22 Linfeng_081211_IgG_1.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 52.74 3.72 1.00 1 2 506.75626 1012.50524 -0.60 25.38 4619 4619 MS2 14/18 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 76.43 3.70 1.00 1 2 606.77856 1212.54985 -2.75 26.97 4905 4905 MS2 15/18 Linfeng_081211_IgG_5.raw High YEELQVTAGR IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 9 3 CID 77.06 3.66 1.00 1 2 583.29407 1165.58086 -3.40 26.61 5055 5055 MS2 17/18 Linfeng_081211_IgG_6.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 54.19 3.66 1.00 1 2 506.75534 1012.50340 -2.41 25.61 4470 4470 MS2 15/18 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 57.56 3.64 1.00 1 2 606.77875 1212.55022 -2.44 27.31 5439 5439 MS2 15/18 Linfeng_081211_IgG_3.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 50.12 3.64 1.00 1 2 829.89948 1658.79167 0.06 33.99 7480 7480 MS2 11/28 Linfeng_081211_IgG_6.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 56.03 3.62 1.00 1 2 704.35797 1407.70867 -2.01 41.34 9563 9563 MS2 18/22 Linfeng_081211_IgG_5.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 29.12 3.62 1.00 1 2 602.32135 1203.63542 -1.19 42.71 6992 6992 MS2 17/18 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 65.44 3.61 1.00 1 2 945.98969 1890.97209 0.63 48.10 11610 11610 MS2 15/28 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 44.30 3.60 1.00 1 2 602.32190 1203.63652 -0.28 33.25 7208 7208 MS2 14/18 Linfeng_081211_IgG_7.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 47.45 3.53 1.00 1 2 506.75562 1012.50395 -1.86 25.24 4710 4710 MS2 14/18 Linfeng_081211_IgG_10.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 44.63 3.53 1.00 1 2 728.34656 1455.68584 -0.34 24.42 4294 4294 MS2 13/22 Linfeng_081211_IgG_4.raw High DVDAAYmNK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00793641.1;IPI:IPI00909059.5;IPI:IPI00956313.1 15 5 CID M7(Oxidation) 39.94 3.51 1.00 1 2 521.72980 1042.45232 1.23 20.17 2089 2089 MS2 13/16 Linfeng_081211_IgG_1.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw High SGFSSVSVSR IPI:IPI00909059.5 3 1 CID 57.22 3.47 1.00 1 2 506.75671 1012.50615 0.31 26.53 4765 4765 MS2 14/18 Linfeng_081211_IgG_2.raw High TAAENEFVTLK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00942512.1;IPI:IPI00956313.1 9 4 CID 43.81 3.46 1.00 1 2 611.81824 1222.62920 -1.84 30.62 6487 6487 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00293665.9 564 60.0 8.00 "Keratin, type II cytoskeletal 6B" 42.02 170 22 1256.62 36.88 94 19 1052.31 20.04 39 8 807.47 26.42 37 10 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High ALYDAELSQmQTHISDTSVVLSmDNNR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID "M10(Oxidation), M23(Oxidation)" 89.24 7.34 1.00 1 3 1024.13904 3070.40256 -2.21 34.43 4103 4103 MS2 38/104 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 106.21 6.20 1.00 1 4 605.31854 2418.25234 0.47 54.58 6405 6405 MS2 43/120 Linfeng_091811_SIN3A_6.raw High SRGSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C11(Carbamidomethyl) 38.71 6.18 1.00 1 3 556.59198 1667.76139 -3.24 22.36 2252 2252 MS2 32/72 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 139.38 6.09 1.00 1 4 605.31946 2418.25600 1.99 54.60 6284 6284 MS2 43/120 Linfeng_091811_SIN3A_9.raw High QNLEPLFEQYINNLR 10 0 CID 53.05 6.04 1.00 1 3 630.99329 1890.96531 -2.96 47.34 5070 5070 MS2 26/56 Linfeng_091611_rIgG_3.raw High QNLEPLFEQYINNLR 10 0 CID 71.16 5.95 1.00 1 3 630.99408 1890.96769 -1.70 47.49 5476 5476 MS2 26/56 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 102.49 5.86 1.00 1 4 605.31946 2418.25600 1.99 54.41 6376 6376 MS2 41/120 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 57.50 5.86 1.00 1 3 630.99371 1890.96659 -2.28 47.69 5658 5658 MS2 26/56 Linfeng_091811_SIN3A_3.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 55.54 5.84 1.00 1 3 630.99359 1890.96622 -2.48 47.68 5625 5625 MS2 27/56 Linfeng_091811_SIN3A_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 61.49 5.78 1.00 1 3 630.99561 1890.97226 0.72 47.71 5843 5843 MS2 28/56 Linfeng_091811_SIN3A_5.raw High QNLEPLFEQYINNLR 10 0 CID 67.64 5.67 1.00 1 3 630.99402 1890.96750 -1.80 47.26 5499 5499 MS2 24/56 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 66.23 5.67 1.00 1 3 630.99329 1890.96531 -2.96 47.33 5477 5477 MS2 25/56 Linfeng_091611_rIgG_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 75.04 5.66 1.00 1 3 630.99408 1890.96769 -1.70 47.59 5641 5641 MS2 28/56 Linfeng_091811_SIN3A_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 112.94 5.43 1.00 1 2 799.88080 1598.75432 -3.06 29.46 3293 3293 MS2 21/32 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 42.47 5.19 1.00 1 3 630.99548 1890.97190 0.53 47.08 11097 11097 MS2 23/56 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID C8(Carbamidomethyl) 86.81 5.19 1.00 1 2 799.88031 1598.75334 -3.67 29.62 3240 3240 MS2 15/32 Linfeng_091811_SIN3A_9.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 96.40 5.18 1.00 1 2 829.89722 1658.78716 -2.66 33.79 7286 7286 MS2 21/28 Linfeng_081211_IgG_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 107.94 5.16 1.00 1 2 799.88336 1598.75945 0.15 29.84 6066 6066 MS2 17/32 Linfeng_081211_IgG_6.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 91.16 5.15 1.00 1 2 829.89801 1658.78874 -1.71 33.65 7554 7554 MS2 18/28 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 117.76 5.14 1.00 1 2 799.88171 1598.75615 -1.91 29.58 6111 6111 MS2 19/32 Linfeng_081211_IgG_8.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 134.97 5.12 1.00 1 2 799.88147 1598.75566 -2.22 29.42 3187 3187 MS2 17/32 Linfeng_091611_rIgG_2.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 108.06 5.12 1.00 1 2 799.88214 1598.75701 -1.38 30.65 6515 6515 MS2 16/32 Linfeng_081211_IgG_3.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 61.38 5.07 1.00 1 2 718.36926 1435.73125 -5.25 23.85 2662 2662 MS2 25/32 Linfeng_091811_SIN3A_5.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 126.81 5.04 1.00 1 2 799.88153 1598.75578 -2.14 29.31 3165 3165 MS2 19/32 Linfeng_091611_rIgG_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR 8 0 CID "M10(Oxidation), M23(Oxidation)" 77.33 5.00 1.00 1 3 1024.13916 3070.40293 -2.09 34.43 3838 3838 MS2 26/104 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 136.18 4.98 1.00 1 3 806.75684 2418.25595 1.97 54.37 6371 6371 MS2 35/80 Linfeng_091611_rIgG_1.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 48.47 4.97 1.00 1 2 718.37097 1435.73467 -2.87 24.31 4504 4504 MS2 20/32 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 64.42 4.96 1.00 1 3 630.99384 1890.96695 -2.09 47.50 5805 5805 MS2 22/56 Linfeng_091611_rIgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 77.00 4.96 1.00 1 3 630.99408 1890.96769 -1.70 47.32 5693 5693 MS2 25/56 Linfeng_091611_rIgG_4.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 68.10 4.94 1.00 1 2 799.88184 1598.75640 -1.76 37.27 5509 5509 MS2 18/32 Linfeng_081211_IgG_1.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 96.56 4.89 1.00 1 2 799.88324 1598.75920 0.00 29.69 6017 6017 MS2 18/32 Linfeng_081211_IgG_10.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 57.01 4.80 1.00 1 3 630.99500 1890.97043 -0.25 48.02 11597 11597 MS2 23/56 Linfeng_081211_IgG_8.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 35.95 4.79 1.00 1 3 453.24686 1357.72602 -4.58 30.67 3455 3455 MS2 26/44 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 72.81 4.79 1.00 1 3 630.99500 1890.97043 -0.25 47.93 5684 5684 MS2 25/56 Linfeng_091811_SIN3A_6.raw High ISIGGGScAISGGYGSR 8 0 CID C8(Carbamidomethyl) 117.33 4.78 1.00 1 2 799.88214 1598.75701 -1.38 29.32 2956 2956 MS2 17/32 Linfeng_091611_rIgG_10.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 99.41 4.78 1.00 1 2 799.88177 1598.75627 -1.83 30.05 6068 6068 MS2 16/32 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 146.12 4.77 1.00 1 3 806.75592 2418.25321 0.83 54.58 6282 6282 MS2 34/80 Linfeng_091811_SIN3A_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 135.04 4.76 1.00 1 3 806.75714 2418.25687 2.34 54.43 6475 6475 MS2 27/80 Linfeng_091611_rIgG_6.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 8 3 CID 31.97 4.75 1.00 1 3 453.24667 1357.72547 -4.99 30.64 3595 3595 MS2 25/44 Linfeng_091811_SIN3A_5.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.86 4.71 1.00 1 2 799.88220 1598.75713 -1.30 29.95 5920 5920 MS2 15/32 Linfeng_081211_IgG_5.raw High QNLEPLFEQYINNLR 10 0 CID 58.23 4.70 1.00 1 3 630.99518 1890.97098 0.04 47.46 5245 5245 MS2 27/56 Linfeng_091611_rIgG_10.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 47.78 4.70 1.00 1 2 718.37238 1435.73747 -0.92 24.68 4393 4393 MS2 17/32 Linfeng_081211_IgG_4.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 80.23 4.67 1.00 1 2 718.37164 1435.73601 -1.94 25.60 4847 4847 MS2 20/32 Linfeng_081211_IgG_3.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 100.55 4.67 1.00 1 2 799.88300 1598.75871 -0.31 29.84 6002 6002 MS2 19/32 Linfeng_081211_IgG_4.raw High NKLEGLEDALQK 8 0 CID 20.89 4.56 1.00 1 3 453.24762 1357.72831 -2.90 30.46 3316 3316 MS2 27/44 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 300.00 4.46 1.00 1 3 806.75665 2418.25541 1.74 54.54 6680 6680 MS2 32/80 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 37.89 4.43 1.00 1 3 485.89963 1455.68433 -1.37 23.88 4355 4355 MS2 21/44 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 99.03 4.43 1.00 1 2 945.98785 1890.96843 -1.31 47.67 5651 5651 MS2 19/28 Linfeng_091811_SIN3A_1.raw High ATGGGLSSVGGGSSTIK IPI:IPI00293665.9;IPI:IPI00910738.1 2 2 CID 75.52 4.42 1.00 1 2 718.37170 1435.73613 -1.85 25.85 4563 4563 MS2 20/32 Linfeng_081211_IgG_2.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 100.10 4.41 1.00 1 2 829.90039 1658.79350 1.16 34.63 8002 8002 MS2 20/28 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 66.89 4.38 1.00 1 3 630.99481 1890.96988 -0.54 47.86 5457 5457 MS2 23/56 Linfeng_091811_SIN3A_7.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.75 4.30 1.00 1 2 590.30304 1179.59880 -1.41 37.61 5573 5573 MS2 17/18 Linfeng_081211_IgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 44.86 4.28 1.00 1 2 590.30206 1179.59685 -3.07 28.64 2700 2700 MS2 17/18 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High GSGGLGGAcGGAGFGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C9(Carbamidomethyl) 82.55 4.27 1.00 1 2 712.81958 1424.63188 -1.23 31.20 4357 4357 MS2 16/32 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.36 4.22 1.00 1 2 590.30188 1179.59648 -3.38 28.64 3081 3081 MS2 17/18 Linfeng_091611_rIgG_2.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 32.60 4.21 1.00 1 2 590.30225 1179.59722 -2.76 29.43 2804 2804 MS2 17/18 Linfeng_091611_rIgG_3.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 53.20 4.20 1.00 1 2 679.37042 1357.73357 0.98 31.33 6525 6525 MS2 16/22 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.05 4.19 1.00 1 2 590.30359 1179.59990 -0.48 32.43 5296 5296 MS2 16/18 Linfeng_081211_IgG_9.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 53.51 4.19 1.00 1 2 590.30389 1179.60051 0.03 31.42 5096 5096 MS2 16/18 Linfeng_081211_IgG_9.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 47.72 4.19 1.00 1 2 590.30298 1179.59868 -1.52 30.35 6074 6074 MS2 16/18 Linfeng_081211_IgG_5.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 28.26 4.19 1.00 1 2 679.36829 1357.72930 -2.17 31.35 6745 6745 MS2 16/22 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 46.87 4.15 1.00 1 2 590.30219 1179.59709 -2.86 28.87 3248 3248 MS2 17/18 Linfeng_091611_rIgG_6.raw High NKLEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 68.63 4.14 1.00 1 2 679.36829 1357.72930 -2.17 30.87 6275 6275 MS2 18/22 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.33 4.14 1.00 1 2 590.30170 1179.59612 -3.69 28.58 3265 3265 MS2 17/18 Linfeng_091611_rIgG_4.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 8.29 4.13 1.00 1 3 533.59106 1598.75864 -0.35 29.97 6044 6044 MS2 18/64 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 46.22 4.13 1.00 1 2 590.30200 1179.59673 -3.17 28.68 3186 3186 MS2 17/18 Linfeng_091811_SIN3A_1.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 45.79 4.12 1.00 1 2 590.30219 1179.59709 -2.86 28.72 3166 3166 MS2 17/18 Linfeng_091611_rIgG_7.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 50.22 4.12 1.00 1 2 590.30261 1179.59795 -2.14 28.70 2874 2874 MS2 17/18 Linfeng_091611_rIgG_10.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.49 4.10 1.00 1 2 590.30151 1179.59575 -4.00 29.01 3155 3155 MS2 17/18 Linfeng_091811_SIN3A_9.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 56.53 4.09 1.00 1 2 590.30328 1179.59929 -1.00 30.12 6087 6087 MS2 16/18 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.63 4.09 1.00 1 2 590.30219 1179.59709 -2.86 28.82 3216 3216 MS2 17/18 Linfeng_091811_SIN3A_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.98 4.09 1.00 1 2 590.30243 1179.59758 -2.45 36.60 5374 5374 MS2 16/18 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 60.45 4.08 1.00 1 2 590.30304 1179.59880 -1.41 29.26 5859 5859 MS2 17/18 Linfeng_081211_IgG_6.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 45.63 4.08 1.00 1 2 590.30200 1179.59673 -3.17 29.86 3246 3246 MS2 16/18 Linfeng_091611_rIgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 46.51 4.08 1.00 1 2 590.30225 1179.59722 -2.76 28.98 3269 3269 MS2 17/18 Linfeng_091811_SIN3A_4.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 48.58 4.08 1.00 1 2 590.30206 1179.59685 -3.07 28.66 3079 3079 MS2 17/18 Linfeng_091611_rIgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 45.94 4.08 1.00 1 2 590.30182 1179.59636 -3.48 29.07 3064 3064 MS2 17/18 Linfeng_091811_SIN3A_10.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.98 4.07 1.00 1 2 590.30200 1179.59673 -3.17 28.70 3083 3083 MS2 17/18 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.73 4.05 1.00 1 2 590.30304 1179.59880 -1.41 29.93 6236 6236 MS2 17/18 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.45 4.01 1.00 1 2 590.30316 1179.59905 -1.21 30.23 6357 6357 MS2 17/18 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 71.79 4.00 1.00 1 2 704.35925 1407.71123 -0.19 41.44 9976 9976 MS2 17/22 Linfeng_081211_IgG_8.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 44.97 4.00 1.00 1 2 590.30365 1179.60002 -0.38 30.55 5902 5902 MS2 17/18 Linfeng_081211_IgG_2.raw High ISIGGGScAISGGYGSR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID C8(Carbamidomethyl) 51.88 3.98 1.00 1 2 799.88312 1598.75896 -0.15 31.00 6028 6028 MS2 12/32 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 58.79 3.94 1.00 1 2 590.30310 1179.59892 -1.31 26.70 4836 4836 MS2 16/18 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 45.92 3.92 1.00 1 2 590.30383 1179.60039 -0.07 39.98 9248 9248 MS2 16/18 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 53.01 3.92 1.00 1 2 590.30304 1179.59880 -1.41 29.45 5855 5855 MS2 16/18 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 34.96 3.91 1.00 1 2 590.30347 1179.59966 -0.69 30.26 6194 6194 MS2 15/18 Linfeng_081211_IgG_6.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 18.50 3.89 1.00 1 2 728.34546 1455.68364 -1.85 23.94 4379 4379 MS2 13/22 Linfeng_081211_IgG_8.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 53.64 3.89 1.00 1 2 704.36151 1407.71575 3.02 42.35 10656 10656 MS2 17/22 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 38.08 3.88 1.00 1 2 590.30341 1179.59953 -0.79 32.59 7228 7228 MS2 16/18 Linfeng_081211_IgG_3.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 67.49 3.88 1.00 1 2 704.35974 1407.71221 0.50 41.99 10006 10006 MS2 17/22 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 37.87 3.87 1.00 1 2 590.30322 1179.59917 -1.10 34.38 7505 7505 MS2 15/18 Linfeng_081211_IgG_4.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 34.21 3.86 1.00 1 2 728.34619 1455.68511 -0.84 24.25 4136 4136 MS2 14/22 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 33.80 3.80 1.00 1 2 590.30273 1179.59819 -1.93 29.11 5756 5756 MS2 15/18 Linfeng_081211_IgG_4.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 37.40 3.80 1.00 1 2 513.76355 1026.51982 -1.63 29.17 5952 5952 MS2 15/18 Linfeng_081211_IgG_3.raw High LEGLEDALQK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 8 4 CID 41.73 3.79 1.00 1 2 558.30035 1115.59343 -0.82 40.44 6338 6338 MS2 16/18 Linfeng_081211_IgG_1.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 57.71 3.78 1.00 1 2 704.36157 1407.71587 3.10 41.60 10019 10019 MS2 17/22 Linfeng_081211_IgG_7.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 47.00 3.77 1.00 1 2 829.89850 1658.78972 -1.12 33.81 7320 7320 MS2 14/28 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 40.25 3.76 1.00 1 2 590.30322 1179.59917 -1.10 31.63 6483 6483 MS2 16/18 Linfeng_081211_IgG_5.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 62.83 3.76 1.00 1 2 606.77863 1212.54997 -2.64 26.79 5043 5043 MS2 15/18 Linfeng_081211_IgG_7.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 41.98 3.75 1.00 1 2 590.30310 1179.59892 -1.31 28.91 5870 5870 MS2 15/18 Linfeng_081211_IgG_8.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 49.97 3.73 1.00 1 2 704.35919 1407.71111 -0.28 47.67 8451 8451 MS2 17/22 Linfeng_081211_IgG_1.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 76.43 3.70 1.00 1 2 606.77856 1212.54985 -2.75 26.97 4905 4905 MS2 15/18 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 40.17 3.70 1.00 1 2 590.30432 1179.60137 0.76 33.33 7436 7436 MS2 13/18 Linfeng_081211_IgG_8.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 32.93 3.70 1.00 1 2 590.30383 1179.60039 -0.07 32.10 4543 4543 MS2 14/18 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 38.94 3.68 1.00 1 2 590.30414 1179.60100 0.45 32.35 6839 6839 MS2 16/18 Linfeng_081211_IgG_4.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 41.50 3.67 1.00 1 2 513.76379 1026.52031 -1.15 29.45 5557 5557 MS2 15/18 Linfeng_081211_IgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 51.40 3.66 1.00 1 2 590.30359 1179.59990 -0.48 31.55 6203 6203 MS2 16/18 Linfeng_081211_IgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 39.33 3.66 1.00 1 2 590.30518 1179.60307 2.21 44.38 10362 10362 MS2 14/18 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High AEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 57.56 3.64 1.00 1 2 606.77875 1212.55022 -2.44 27.31 5439 5439 MS2 15/18 Linfeng_081211_IgG_3.raw High QcANLQAAIADAEQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 5 3 CID C2(Carbamidomethyl) 50.12 3.64 1.00 1 2 829.89948 1658.79167 0.06 33.99 7480 7480 MS2 11/28 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 64.40 3.64 1.00 1 2 590.30341 1179.59953 -0.79 33.30 6724 6724 MS2 16/18 Linfeng_081211_IgG_2.raw High ADTLTDEINFLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00956313.1 7 3 CID 56.03 3.62 1.00 1 2 704.35797 1407.70867 -2.01 41.34 9563 9563 MS2 18/22 Linfeng_081211_IgG_5.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 29.12 3.62 1.00 1 2 602.32135 1203.63542 -1.19 42.71 6992 6992 MS2 17/18 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 65.44 3.61 1.00 1 2 945.98969 1890.97209 0.63 48.10 11610 11610 MS2 15/28 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 44.30 3.60 1.00 1 2 602.32190 1203.63652 -0.28 33.25 7208 7208 MS2 14/18 Linfeng_081211_IgG_7.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 30.79 3.58 1.00 1 2 590.30420 1179.60112 0.55 50.75 11295 11295 MS2 14/18 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 47.54 3.58 1.00 1 2 590.30481 1179.60234 1.59 45.48 10591 10591 MS2 16/18 Linfeng_081211_IgG_4.raw High SRAEAESWYQTK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 4 CID 44.63 3.53 1.00 1 2 728.34656 1455.68584 -0.34 24.42 4294 4294 MS2 13/22 Linfeng_081211_IgG_4.raw High DVDAAYmNK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00793641.1;IPI:IPI00909059.5;IPI:IPI00956313.1 15 5 CID M7(Oxidation) 39.94 3.51 1.00 1 2 521.72980 1042.45232 1.23 20.17 2089 2089 MS2 13/16 Linfeng_081211_IgG_1.raw High SGFSSISVSR IPI:IPI00293665.9;IPI:IPI00910738.1;IPI:IPI00956313.1 5 3 CID 52.73 3.50 1.00 1 2 513.76306 1026.51885 -2.58 27.99 5454 5454 MS2 14/18 Linfeng_081211_IgG_10.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 34.49 3.49 1.00 1 2 590.30322 1179.59917 -1.10 29.34 5699 5699 MS2 14/18 Linfeng_081211_IgG_5.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw High TAAENEFVTLK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00942512.1;IPI:IPI00956313.1 9 4 CID 43.81 3.46 1.00 1 2 611.81824 1222.62920 -1.84 30.62 6487 6487 MS2 13/20 Linfeng_081211_IgG_8.raw IPI:IPI00217963.3 473 51.2 5.05 "Keratin, type I cytoskeletal 16" 53.49 169 20 986.75 42.92 98 16 552.94 27.91 31 9 625.82 39.96 40 13 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 99.37 7.19 1.00 1 2 1032.57178 2064.13628 -4.17 39.20 4743 4743 MS2 25/36 Linfeng_091811_SIN3A_5.raw High YcmQLSQIQGLIGSVEEQLAQLR IPI:IPI00217963.3 2 1 CID "C2(Carbamidomethyl), M3(Oxidation)" 71.26 6.88 1.00 1 3 894.11591 2680.33316 -3.82 54.95 5987 5987 MS2 28/88 Linfeng_091611_rIgG_3.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 97.96 6.75 1.00 1 3 784.03357 2350.08615 -1.91 25.23 2629 2629 MS2 31/84 Linfeng_091611_rIgG_1.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 61.52 6.70 1.00 1 3 784.03265 2350.08341 -3.08 25.41 2879 2879 MS2 31/84 Linfeng_091811_SIN3A_5.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 72.14 6.63 1.00 1 3 707.34906 2120.03263 -6.62 27.18 3124 3124 MS2 30/72 Linfeng_091811_SIN3A_5.raw High VLQGLEIELQSQLSmK IPI:IPI00217963.3 1 1 CID M15(Oxidation) 122.50 6.62 1.00 1 3 611.32983 1831.97495 -4.65 41.34 5027 5027 MS2 33/60 Linfeng_091811_SIN3A_5.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 73.16 6.44 1.00 1 3 707.35217 2120.04197 -2.22 27.85 5314 5314 MS2 34/72 Linfeng_081211_IgG_7.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 148.41 6.43 1.00 1 3 688.71686 2064.13602 -4.29 38.93 4415 4415 MS2 37/72 Linfeng_091611_rIgG_2.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 143.21 6.42 1.00 1 3 688.71643 2064.13474 -4.91 38.91 4713 4713 MS2 38/72 Linfeng_091611_rIgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 154.77 6.39 1.00 1 3 688.71582 2064.13291 -5.80 39.10 4563 4563 MS2 38/72 Linfeng_091811_SIN3A_1.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 300.00 6.38 1.00 1 3 688.71729 2064.13730 -3.67 39.12 4732 4732 MS2 38/72 Linfeng_091811_SIN3A_5.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 48.17 6.37 1.00 1 3 784.03394 2350.08725 -1.45 25.32 2904 2904 MS2 30/84 Linfeng_091611_rIgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 69.89 6.34 1.00 1 2 1032.57471 2064.14214 -1.33 38.90 8879 8879 MS2 22/36 Linfeng_081211_IgG_5.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 42.17 6.31 1.00 1 3 784.03320 2350.08506 -2.38 26.17 4872 4872 MS2 30/84 Linfeng_081211_IgG_7.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 85.92 6.25 1.00 1 3 784.03394 2350.08725 -1.45 27.01 5326 5326 MS2 33/84 Linfeng_081211_IgG_3.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 113.79 6.25 1.00 1 3 688.71710 2064.13675 -3.94 39.05 4188 4188 MS2 36/72 Linfeng_091611_rIgG_10.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 140.36 6.10 1.00 1 2 1052.48047 2103.95366 -3.61 30.07 3518 3518 MS2 20/40 Linfeng_091811_SIN3A_5.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 118.05 6.07 1.00 1 3 688.71594 2064.13327 -5.62 39.20 4545 4545 MS2 36/72 Linfeng_091811_SIN3A_2.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 65.34 6.05 1.00 1 3 707.35278 2120.04380 -1.36 27.77 5364 5364 MS2 26/72 Linfeng_081211_IgG_6.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 31.34 6.01 1.00 1 3 784.03430 2350.08835 -0.98 25.60 4900 4900 MS2 32/84 Linfeng_081211_IgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 108.53 5.96 1.00 1 3 688.71893 2064.14225 -1.28 38.88 8874 8874 MS2 33/72 Linfeng_081211_IgG_5.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 114.84 5.94 1.00 1 3 688.71674 2064.13565 -4.47 38.88 4002 4002 MS2 34/72 Linfeng_091611_rIgG_3.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 131.07 5.92 1.00 1 3 688.71545 2064.13181 -6.33 38.92 4429 4429 MS2 37/72 Linfeng_091611_rIgG_1.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 62.57 5.92 1.00 1 3 707.35266 2120.04343 -1.53 27.16 5331 5331 MS2 25/72 Linfeng_081211_IgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 105.49 5.89 1.00 1 2 1032.57544 2064.14360 -0.62 40.02 9845 9845 MS2 24/36 Linfeng_081211_IgG_3.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 136.65 5.85 1.00 1 3 688.71912 2064.14280 -1.01 39.14 9183 9183 MS2 35/72 Linfeng_081211_IgG_7.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 140.62 5.83 1.00 1 3 688.71948 2064.14389 -0.48 38.86 9219 9219 MS2 34/72 Linfeng_081211_IgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 50.61 5.83 1.00 1 3 688.72040 2064.14664 0.85 39.55 9256 9256 MS2 29/72 Linfeng_081211_IgG_6.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 88.62 5.61 1.00 1 3 688.72058 2064.14719 1.12 39.02 8948 8948 MS2 31/72 Linfeng_081211_IgG_4.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 50.09 5.59 1.00 1 3 707.35199 2120.04142 -2.48 28.72 5810 5810 MS2 27/72 Linfeng_081211_IgG_3.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 58.91 5.59 1.00 1 2 1032.57678 2064.14629 0.68 39.65 9292 9292 MS2 18/36 Linfeng_081211_IgG_6.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 129.88 5.48 1.00 1 3 688.71948 2064.14389 -0.48 39.93 9819 9819 MS2 32/72 Linfeng_081211_IgG_3.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 28.38 5.37 1.00 1 3 784.03265 2350.08341 -3.08 25.55 2566 2566 MS2 28/84 Linfeng_091811_SIN3A_7.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 82.41 5.37 1.00 1 2 1052.48340 2103.95952 -0.83 30.25 6034 6034 MS2 20/40 Linfeng_081211_IgG_5.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 110.58 5.28 1.00 1 3 701.98920 2103.95304 -3.91 30.06 3516 3516 MS2 32/80 Linfeng_091811_SIN3A_5.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 21.66 5.10 1.00 1 3 707.35309 2120.04471 -0.92 41.74 6715 6715 MS2 25/72 Linfeng_081211_IgG_1.raw High TEELNKEVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 59.71 5.07 1.00 1 3 707.34808 2120.02970 -8.01 26.89 2846 2846 MS2 24/72 Linfeng_091611_rIgG_1.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 66.92 4.88 1.00 1 2 703.34735 1405.68743 -3.13 21.89 2389 2389 MS2 20/24 Linfeng_091811_SIN3A_5.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 26.92 4.85 1.00 1 3 701.98975 2103.95469 -3.13 29.96 3362 3362 MS2 27/80 Linfeng_091811_SIN3A_1.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 59.85 4.85 1.00 1 2 651.32947 1301.65166 -5.19 27.27 2960 2960 MS2 18/22 Linfeng_091811_SIN3A_2.raw High VLQGLEIELQSQLSmK IPI:IPI00217963.3 1 1 CID M15(Oxidation) 48.80 4.84 1.00 1 3 611.33008 1831.97568 -4.25 41.55 4666 4666 MS2 30/60 Linfeng_091811_SIN3A_7.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 81.43 4.82 1.00 1 2 639.79614 1278.58501 -0.47 22.27 3849 3849 MS2 20/28 Linfeng_081211_IgG_8.raw High VLQGLEIELQSQLSmK IPI:IPI00217963.3 1 1 CID M15(Oxidation) 72.55 4.80 1.00 1 3 611.33069 1831.97751 -3.25 41.39 4866 4866 MS2 31/60 Linfeng_091811_SIN3A_6.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 61.05 4.78 1.00 1 2 703.34845 1405.68962 -1.56 22.77 3644 3644 MS2 17/24 Linfeng_081211_IgG_5.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 48.66 4.75 1.00 1 2 1052.48376 2103.96025 -0.48 33.17 4727 4727 MS2 18/40 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.27 4.75 1.00 1 2 651.32880 1301.65032 -6.22 27.15 2979 2979 MS2 19/22 Linfeng_091811_SIN3A_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 102.74 4.74 1.00 1 2 639.79480 1278.58232 -2.57 21.65 2219 2219 MS2 22/28 Linfeng_091811_SIN3A_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.33 4.68 1.00 1 2 651.33307 1301.65886 0.35 34.79 5016 5016 MS2 18/22 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 68.05 4.68 1.00 1 2 651.33020 1301.65312 -4.06 27.17 2879 2879 MS2 18/22 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 72.33 4.66 1.00 1 2 651.33154 1301.65581 -2.00 27.07 2659 2659 MS2 18/22 Linfeng_091611_rIgG_10.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 55.69 4.64 1.00 1 2 651.32935 1301.65141 -5.38 27.06 3062 3062 MS2 18/22 Linfeng_091611_rIgG_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 79.78 4.64 1.00 1 2 639.79419 1278.58110 -3.52 21.90 2391 2391 MS2 22/28 Linfeng_091811_SIN3A_5.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 41.09 4.63 1.00 1 2 703.35065 1405.69402 1.56 24.38 3035 3035 MS2 16/24 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.47 4.62 1.00 1 2 651.33142 1301.65557 -2.19 27.48 5414 5414 MS2 19/22 Linfeng_081211_IgG_8.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 36.47 4.61 1.00 1 3 688.71979 2064.14481 -0.03 45.69 7885 7885 MS2 26/72 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 55.88 4.60 1.00 1 2 651.32861 1301.64995 -6.50 27.34 2804 2804 MS2 18/22 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 64.41 4.59 1.00 1 2 651.32947 1301.65166 -5.19 27.18 2962 2962 MS2 18/22 Linfeng_091611_rIgG_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 61.79 4.59 1.00 1 2 651.32855 1301.64983 -6.59 27.44 2939 2939 MS2 18/22 Linfeng_091811_SIN3A_9.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 58.68 4.58 1.00 1 2 703.34979 1405.69231 0.35 23.41 4112 4112 MS2 17/24 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 56.82 4.57 1.00 1 2 651.32880 1301.65032 -6.22 27.21 2997 2997 MS2 19/22 Linfeng_091811_SIN3A_3.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 54.13 4.57 1.00 1 2 651.32971 1301.65215 -4.81 27.08 2872 2872 MS2 19/22 Linfeng_091611_rIgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 58.13 4.56 1.00 1 2 651.32935 1301.65141 -5.38 27.12 2881 2881 MS2 19/22 Linfeng_091611_rIgG_2.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 83.89 4.55 1.00 1 2 703.34808 1405.68889 -2.09 21.74 2134 2134 MS2 19/24 Linfeng_091611_rIgG_2.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 69.06 4.55 1.00 1 2 703.34790 1405.68852 -2.35 21.70 2226 2226 MS2 20/24 Linfeng_091811_SIN3A_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 59.69 4.55 1.00 1 2 651.33038 1301.65349 -3.78 27.24 3053 3053 MS2 18/22 Linfeng_091611_rIgG_5.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 70.10 4.54 1.00 1 2 651.32886 1301.65044 -6.13 27.42 2839 2839 MS2 17/22 Linfeng_091811_SIN3A_10.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.45 4.53 1.00 1 2 651.33209 1301.65691 -1.15 29.01 5430 5430 MS2 18/22 Linfeng_081211_IgG_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 64.92 4.53 1.00 1 2 651.33112 1301.65495 -2.66 27.98 5347 5347 MS2 18/22 Linfeng_081211_IgG_7.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 81.59 4.53 1.00 1 2 639.79498 1278.58269 -2.28 21.64 2130 2130 MS2 22/28 Linfeng_091611_rIgG_1.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 92.72 4.53 1.00 1 2 669.83411 1338.66094 -2.94 25.15 2713 2713 MS2 21/26 Linfeng_091811_SIN3A_1.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 59.73 4.52 1.00 1 2 1052.48303 2103.95879 -1.18 30.40 6183 6183 MS2 17/40 Linfeng_081211_IgG_7.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 60.71 4.52 1.00 1 2 1032.57703 2064.14678 0.92 45.88 7945 7945 MS2 18/36 Linfeng_081211_IgG_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 68.68 4.51 1.00 1 2 639.79437 1278.58147 -3.24 21.79 2196 2196 MS2 22/28 Linfeng_091811_SIN3A_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.19 4.50 1.00 1 2 651.33142 1301.65557 -2.19 28.01 5221 5221 MS2 17/22 Linfeng_081211_IgG_5.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 65.34 4.49 1.00 1 2 1052.48364 2103.96001 -0.60 30.86 6588 6588 MS2 18/40 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 100.32 4.49 1.00 1 2 639.79620 1278.58513 -0.37 23.56 4165 4165 MS2 21/28 Linfeng_081211_IgG_3.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 65.52 4.49 1.00 1 2 703.34802 1405.68877 -2.17 21.72 2142 2142 MS2 21/24 Linfeng_091611_rIgG_1.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 72.87 4.48 1.00 1 2 703.34857 1405.68987 -1.39 21.73 2405 2405 MS2 21/24 Linfeng_091611_rIgG_8.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 65.34 4.48 1.00 1 2 651.32990 1301.65251 -4.53 27.36 3043 3043 MS2 17/22 Linfeng_091611_rIgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 71.18 4.47 1.00 1 2 651.33154 1301.65581 -2.00 32.77 4658 4658 MS2 18/22 Linfeng_081211_IgG_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 87.61 4.46 1.00 1 2 639.79468 1278.58208 -2.76 21.91 2253 2253 MS2 22/28 Linfeng_091811_SIN3A_3.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 62.31 4.45 1.00 1 2 651.32990 1301.65251 -4.53 27.07 2497 2497 MS2 18/22 Linfeng_091611_rIgG_3.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 72.25 4.45 1.00 1 2 703.34833 1405.68938 -1.74 21.83 2152 2152 MS2 16/24 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 53.96 4.45 1.00 1 2 651.33258 1301.65788 -0.40 27.71 5349 5349 MS2 17/22 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 63.91 4.45 1.00 1 2 651.33215 1301.65703 -1.06 35.90 5221 5221 MS2 17/22 Linfeng_081211_IgG_1.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 81.63 4.45 1.00 1 2 1052.48523 2103.96318 0.91 31.11 6063 6063 MS2 18/40 Linfeng_081211_IgG_2.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 63.93 4.45 1.00 1 2 703.34985 1405.69243 0.43 22.17 3819 3819 MS2 16/24 Linfeng_081211_IgG_8.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 47.28 4.43 1.00 1 2 639.79572 1278.58415 -1.14 22.42 3847 3847 MS2 21/28 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 57.77 4.42 1.00 1 2 651.32886 1301.65044 -6.13 27.38 3031 3031 MS2 17/22 Linfeng_091811_SIN3A_6.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 70.71 4.41 1.00 1 2 553.78394 1106.56059 -1.56 24.35 4176 4176 MS2 17/20 Linfeng_081211_IgG_5.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 42.31 4.40 1.00 1 2 690.36438 1379.72148 -4.58 28.45 3298 3298 MS2 17/20 Linfeng_091811_SIN3A_5.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 69.36 4.40 1.00 1 2 651.33057 1301.65386 -3.50 27.30 3174 3174 MS2 17/22 Linfeng_091611_rIgG_8.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 81.79 4.39 1.00 1 2 639.79510 1278.58293 -2.09 21.66 2122 2122 MS2 22/28 Linfeng_091611_rIgG_2.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 83.46 4.39 1.00 1 2 669.83319 1338.65911 -4.31 25.32 2865 2865 MS2 21/26 Linfeng_091811_SIN3A_5.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 28.85 4.39 1.00 1 2 553.78375 1106.56023 -1.90 23.46 2454 2454 MS2 17/20 Linfeng_091611_rIgG_7.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 62.43 4.39 1.00 1 2 703.34674 1405.68620 -4.00 21.88 2052 2052 MS2 15/24 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.14 4.38 1.00 1 2 651.33130 1301.65532 -2.37 33.79 4838 4838 MS2 18/22 Linfeng_081211_IgG_1.raw High KNHEEEmLALR IPI:IPI00217963.3 1 1 CID M7(Oxidation) 39.03 4.37 1.00 1 3 462.56345 1385.67578 -6.11 19.66 2076 2076 MS2 21/40 Linfeng_091811_SIN3A_5.raw High GQTGGDVNVEmDAAPGVDLSR IPI:IPI00217963.3 1 1 CID M11(Oxidation) 22.63 4.36 1.00 1 3 701.99127 2103.95926 -0.95 29.90 6227 6227 MS2 22/80 Linfeng_081211_IgG_8.raw High TDLEmQIEGLKEELAYLRK IPI:IPI00217963.3 2 1 CID M5(Oxidation) 16.46 4.36 1.00 1 3 765.73401 2295.18747 -1.18 45.06 5510 5510 MS2 16/72 Linfeng_091811_SIN3A_5.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 84.30 4.35 1.00 1 2 639.79572 1278.58415 -1.14 22.88 3813 3813 MS2 18/28 Linfeng_081211_IgG_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.06 4.35 1.00 1 2 651.32880 1301.65032 -6.22 27.36 3047 3047 MS2 17/22 Linfeng_091811_SIN3A_4.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.62 4.32 1.00 1 2 651.33185 1301.65642 -1.53 29.74 6175 6175 MS2 17/22 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 55.03 4.31 1.00 1 2 651.33197 1301.65666 -1.34 27.87 5345 5345 MS2 17/22 Linfeng_081211_IgG_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 64.16 4.31 1.00 1 2 639.79456 1278.58183 -2.95 21.73 2321 2321 MS2 15/28 Linfeng_091611_rIgG_4.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 51.90 4.31 1.00 1 2 690.36426 1379.72124 -4.76 28.32 3137 3137 MS2 17/20 Linfeng_091811_SIN3A_1.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 79.96 4.31 1.00 1 2 703.34912 1405.69097 -0.61 22.38 3832 3832 MS2 17/24 Linfeng_081211_IgG_6.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 66.95 4.30 1.00 1 2 553.78528 1106.56328 0.86 24.52 4332 4332 MS2 17/20 Linfeng_081211_IgG_4.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 73.94 4.29 1.00 1 2 553.78265 1106.55803 -3.88 23.30 2362 2362 MS2 18/20 Linfeng_091611_rIgG_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 47.82 4.29 1.00 1 2 690.36652 1379.72576 -1.48 29.08 5745 5745 MS2 17/20 Linfeng_081211_IgG_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 46.66 4.29 1.00 1 2 639.79633 1278.58537 -0.18 23.79 3915 3915 MS2 19/28 Linfeng_081211_IgG_2.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 66.16 4.27 1.00 1 2 651.32928 1301.65129 -5.47 27.30 3140 3140 MS2 18/22 Linfeng_091811_SIN3A_5.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 35.49 4.27 1.00 1 3 784.03601 2350.09348 1.20 25.91 4791 4791 MS2 26/84 Linfeng_081211_IgG_4.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 56.95 4.26 1.00 1 2 669.83405 1338.66081 -3.03 25.32 2686 2686 MS2 20/26 Linfeng_091811_SIN3A_2.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 75.48 4.25 1.00 1 2 553.78387 1106.56047 -1.67 25.59 4480 4480 MS2 17/20 Linfeng_081211_IgG_2.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 50.42 4.25 1.00 1 2 690.36621 1379.72515 -1.93 28.87 5534 5534 MS2 17/20 Linfeng_081211_IgG_5.raw High TDLEmQIEGLKEELAYLR IPI:IPI00217963.3 2 1 CID M5(Oxidation) 69.25 4.25 1.00 1 3 723.03741 2167.09769 1.14 48.10 11335 11335 MS2 25/68 Linfeng_081211_IgG_5.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 63.35 4.24 1.00 1 2 553.78271 1106.55815 -3.77 23.41 2369 2369 MS2 19/20 Linfeng_091611_rIgG_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.49 4.23 1.00 1 2 651.33057 1301.65386 -3.50 28.73 5689 5689 MS2 17/22 Linfeng_081211_IgG_6.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 80.53 4.22 1.00 1 2 639.79498 1278.58269 -2.28 21.94 2193 2193 MS2 19/28 Linfeng_091811_SIN3A_9.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 55.78 4.20 1.00 1 2 639.79730 1278.58733 1.35 22.89 3486 3486 MS2 18/28 Linfeng_081211_IgG_9.raw High LLEGEDAHLSSQQASGQSYSSR IPI:IPI00217963.3 2 1 CID 34.98 4.20 1.00 1 3 784.03430 2350.08835 -0.98 26.03 4919 4919 MS2 21/84 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 61.32 4.19 1.00 1 2 651.33191 1301.65654 -1.44 27.72 5362 5362 MS2 17/22 Linfeng_081211_IgG_10.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 32.70 4.19 1.00 1 2 639.79510 1278.58293 -2.09 22.01 2297 2297 MS2 18/28 Linfeng_091811_SIN3A_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 79.63 4.17 1.00 1 2 639.79437 1278.58147 -3.24 21.70 2028 2028 MS2 20/28 Linfeng_091811_SIN3A_7.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 78.96 4.17 1.00 1 2 703.34875 1405.69023 -1.13 22.79 3779 3779 MS2 18/24 Linfeng_081211_IgG_7.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 59.48 4.15 1.00 1 2 703.34955 1405.69182 0.00 23.69 3883 3883 MS2 16/24 Linfeng_081211_IgG_2.raw High TRLEQEIATYR IPI:IPI00217963.3 14 1 CID 48.03 4.14 1.00 1 2 690.36597 1379.72466 -2.28 28.26 3027 3027 MS2 17/20 Linfeng_091611_rIgG_9.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 48.74 4.14 1.00 1 2 553.78375 1106.56023 -1.90 23.65 2529 2529 MS2 18/20 Linfeng_091811_SIN3A_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 42.49 4.10 1.00 1 2 639.79553 1278.58379 -1.42 21.85 2283 2283 MS2 15/28 Linfeng_091611_rIgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.19 4.08 1.00 1 2 651.33221 1301.65715 -0.97 28.68 5801 5801 MS2 17/22 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 53.27 4.06 1.00 1 2 639.79694 1278.58660 0.77 24.39 3037 3037 MS2 15/28 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 24.43 4.03 1.00 1 2 651.33356 1301.65984 1.10 30.13 5992 5992 MS2 14/22 Linfeng_081211_IgG_5.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 65.92 4.01 1.00 1 2 553.78381 1106.56035 -1.78 24.03 4411 4411 MS2 17/20 Linfeng_081211_IgG_8.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 38.81 3.97 1.00 1 2 553.78339 1106.55950 -2.56 24.20 4402 4402 MS2 17/20 Linfeng_081211_IgG_6.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 76.70 3.97 1.00 1 2 669.83490 1338.66252 -1.75 26.76 5233 5233 MS2 17/26 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 57.29 3.95 1.00 1 2 639.79596 1278.58464 -0.75 22.63 3866 3866 MS2 20/28 Linfeng_081211_IgG_10.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 50.83 3.95 1.00 1 2 561.79205 1122.57683 -1.93 26.79 5244 5244 MS2 15/16 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 43.30 3.94 1.00 1 2 639.79541 1278.58354 -1.61 22.82 3661 3661 MS2 22/28 Linfeng_081211_IgG_5.raw High EVASNSELVQSSR IPI:IPI00217963.3 1 1 CID 58.21 3.91 1.00 1 2 703.34961 1405.69194 0.09 22.60 3707 3707 MS2 14/24 Linfeng_081211_IgG_4.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 87.17 3.89 1.00 1 2 669.83582 1338.66435 -0.39 25.48 4859 4859 MS2 19/26 Linfeng_081211_IgG_8.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 51.34 3.88 1.00 1 2 690.36676 1379.72624 -1.13 28.80 5712 5712 MS2 15/20 Linfeng_081211_IgG_10.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 69.75 3.86 1.00 1 2 651.33069 1301.65410 -3.31 29.71 4787 4787 MS2 16/22 Linfeng_081211_IgG_9.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 22.31 3.86 1.00 1 2 639.79596 1278.58464 -0.75 27.26 3602 3602 MS2 17/28 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 36.86 3.86 1.00 1 2 651.33319 1301.65911 0.53 31.52 4413 4413 MS2 16/22 Linfeng_081211_IgG_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 41.49 3.86 1.00 1 2 690.36737 1379.72746 -0.24 30.27 6201 6201 MS2 11/20 Linfeng_081211_IgG_6.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 44.46 3.76 1.00 1 2 515.30029 1029.59331 -0.61 34.85 7148 7148 MS2 15/16 Linfeng_081211_IgG_2.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 84.17 3.75 1.00 1 2 669.83502 1338.66277 -1.57 25.96 4591 4591 MS2 18/26 Linfeng_081211_IgG_5.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.79 3.72 1.00 1 2 515.30084 1029.59441 0.45 34.50 7954 7954 MS2 15/16 Linfeng_081211_IgG_3.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 75.58 3.72 1.00 1 2 669.83527 1338.66326 -1.21 25.72 4815 4815 MS2 19/26 Linfeng_081211_IgG_6.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 63.52 3.69 1.00 1 2 669.83582 1338.66435 -0.39 27.06 4929 4929 MS2 17/26 Linfeng_081211_IgG_2.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 94.00 3.67 1.00 1 2 669.83496 1338.66265 -1.66 26.02 4827 4827 MS2 18/26 Linfeng_081211_IgG_7.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 68.16 3.66 1.00 1 2 553.78394 1106.56059 -1.56 25.29 4747 4747 MS2 18/20 Linfeng_081211_IgG_3.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 68.51 3.66 1.00 1 2 669.83685 1338.66643 1.16 25.89 4783 4783 MS2 16/26 Linfeng_081211_IgG_4.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.65 3.66 1.00 1 2 515.30029 1029.59331 -0.61 33.71 7363 7363 MS2 15/16 Linfeng_081211_IgG_7.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 43.56 3.61 1.00 1 2 515.30023 1029.59319 -0.73 42.53 6934 6934 MS2 15/16 Linfeng_081211_IgG_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 65.86 3.61 1.00 1 2 639.79614 1278.58501 -0.47 22.69 3740 3740 MS2 17/28 Linfeng_081211_IgG_4.raw High ASLENSLEETK IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID 70.90 3.61 1.00 1 2 610.80280 1220.59831 -1.82 26.79 5218 5218 MS2 15/20 Linfeng_081211_IgG_8.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 52.13 3.60 1.00 1 2 561.79163 1122.57598 -2.70 31.59 4423 4423 MS2 15/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 37.34 3.57 1.00 1 2 515.29987 1029.59245 -1.44 33.17 7385 7385 MS2 15/16 Linfeng_081211_IgG_8.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 42.21 3.55 1.00 1 2 515.30115 1029.59502 1.05 36.35 6128 6128 MS2 15/16 Linfeng_081211_IgG_9.raw High APSTYGGGLSVSSR IPI:IPI00217963.3 1 1 CID 67.53 3.55 1.00 1 2 669.83545 1338.66362 -0.93 30.62 4243 4243 MS2 18/26 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 56.04 3.53 1.00 1 2 561.79254 1122.57781 -1.06 25.49 4862 4862 MS2 15/16 Linfeng_081211_IgG_8.raw High ASLENSLEETK IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID 79.94 3.53 1.00 1 2 610.80176 1220.59624 -3.52 28.35 5275 5275 MS2 15/20 Linfeng_081211_IgG_2.raw High IIAATIENAQPILQIDNAR IPI:IPI00217963.3 4 1 CID 54.16 3.52 1.00 1 2 1032.57910 2064.15093 2.93 39.05 8962 8962 MS2 15/36 Linfeng_081211_IgG_4.raw High EVFTSSSSSSSR IPI:IPI00217963.3 2 1 CID 53.06 3.50 1.00 1 2 630.78833 1260.56938 -0.72 19.48 2961 2961 MS2 17/22 Linfeng_081211_IgG_8.raw High VTmQNLNDR IPI:IPI00009865.4;IPI:IPI00217963.3;IPI:IPI00328103.4;IPI:IPI00384444.6 9 4 CID M3(Oxidation) 45.48 3.50 1.00 1 2 553.76672 1106.52617 0.21 18.27 1719 1719 MS2 15/16 Linfeng_081211_IgG_1.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 38.64 3.48 1.00 1 2 561.79089 1122.57451 -4.00 25.80 4846 4846 MS2 15/16 Linfeng_081211_IgG_10.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 47.59 3.47 1.00 1 2 515.29950 1029.59172 -2.16 33.58 7207 7207 MS2 15/16 Linfeng_081211_IgG_5.raw IPI:IPI00009867.3 590 62.3 7.74 "Keratin, type II cytoskeletal 5" 39.32 168 21 1335.58 39.32 108 21 1079.25 14.24 26 7 845.25 15.08 34 7 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High QNLEPLFEQYINNLR 10 0 CID 53.05 6.04 1.00 1 3 630.99329 1890.96531 -2.96 47.34 5070 5070 MS2 26/56 Linfeng_091611_rIgG_3.raw High QNLEPLFEQYINNLR 10 0 CID 71.16 5.95 1.00 1 3 630.99408 1890.96769 -1.70 47.49 5476 5476 MS2 26/56 Linfeng_091611_rIgG_9.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 57.50 5.86 1.00 1 3 630.99371 1890.96659 -2.28 47.69 5658 5658 MS2 26/56 Linfeng_091811_SIN3A_3.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 55.54 5.84 1.00 1 3 630.99359 1890.96622 -2.48 47.68 5625 5625 MS2 27/56 Linfeng_091811_SIN3A_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 61.49 5.78 1.00 1 3 630.99561 1890.97226 0.72 47.71 5843 5843 MS2 28/56 Linfeng_091811_SIN3A_5.raw High QNLEPLFEQYINNLR 10 0 CID 67.64 5.67 1.00 1 3 630.99402 1890.96750 -1.80 47.26 5499 5499 MS2 24/56 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 66.23 5.67 1.00 1 3 630.99329 1890.96531 -2.96 47.33 5477 5477 MS2 25/56 Linfeng_091611_rIgG_2.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 75.04 5.66 1.00 1 3 630.99408 1890.96769 -1.70 47.59 5641 5641 MS2 28/56 Linfeng_091811_SIN3A_1.raw High VSLAGAcGVGGYGSR 2 0 CID C7(Carbamidomethyl) 116.51 5.54 1.00 1 2 705.84143 1410.67558 -2.77 28.03 3098 3098 MS2 23/28 Linfeng_091811_SIN3A_1.raw High SFSTASAITPSVSR 2 0 CID 69.78 5.24 1.00 1 2 705.86182 1410.71636 -4.28 28.90 3216 3216 MS2 22/26 Linfeng_091811_SIN3A_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 42.47 5.19 1.00 1 3 630.99548 1890.97190 0.53 47.08 11097 11097 MS2 23/56 Linfeng_081211_IgG_5.raw High VSLAGAcGVGGYGSR 2 0 CID C7(Carbamidomethyl) 103.35 5.16 1.00 1 2 705.84070 1410.67412 -3.81 28.35 3066 3066 MS2 18/28 Linfeng_091811_SIN3A_9.raw High SFSTASAITPSVSR 2 0 CID 79.67 5.12 1.00 1 2 705.86285 1410.71843 -2.81 28.81 3098 3098 MS2 19/26 Linfeng_091611_rIgG_9.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 68.78 5.12 1.00 1 2 705.86450 1410.72173 -0.47 29.56 5897 5897 MS2 17/26 Linfeng_081211_IgG_7.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 33.52 5.02 1.00 1 3 567.93689 1701.79612 -0.75 32.74 6895 6895 MS2 22/56 Linfeng_081211_IgG_5.raw High VSLAGAcGVGGYGSR 2 0 CID C7(Carbamidomethyl) 108.72 5.02 1.00 1 2 705.84100 1410.67473 -3.38 28.26 3092 3092 MS2 23/28 Linfeng_091811_SIN3A_2.raw High QNLEPLFEQYINNLR 10 0 CID 64.42 4.96 1.00 1 3 630.99384 1890.96695 -2.09 47.50 5805 5805 MS2 22/56 Linfeng_091611_rIgG_8.raw High QNLEPLFEQYINNLR 10 0 CID 77.00 4.96 1.00 1 3 630.99408 1890.96769 -1.70 47.32 5693 5693 MS2 25/56 Linfeng_091611_rIgG_4.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 82.44 4.95 1.00 1 2 705.84253 1410.67778 -1.21 28.67 5667 5667 MS2 17/28 Linfeng_081211_IgG_6.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 85.17 4.95 1.00 1 2 851.40253 1701.79778 0.23 33.55 7597 7597 MS2 19/28 Linfeng_081211_IgG_3.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 88.04 4.93 1.00 1 2 851.40131 1701.79534 -1.20 32.76 6903 6903 MS2 19/28 Linfeng_081211_IgG_5.raw High SFSTASAITPSVSR 2 0 CID 68.47 4.93 1.00 1 2 705.86255 1410.71782 -3.24 29.00 3195 3195 MS2 18/26 Linfeng_091811_SIN3A_2.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 101.18 4.93 1.00 1 2 851.40137 1701.79546 -1.13 32.51 7151 7151 MS2 20/28 Linfeng_081211_IgG_8.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 104.23 4.89 1.00 1 2 705.84351 1410.67974 0.17 29.55 6103 6103 MS2 21/28 Linfeng_081211_IgG_3.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 50.27 4.88 1.00 1 2 705.86481 1410.72234 -0.04 29.41 5864 5864 MS2 19/26 Linfeng_081211_IgG_4.raw High VSLAGAcGVGGYGSR 2 0 CID C7(Carbamidomethyl) 97.27 4.87 1.00 1 2 705.84058 1410.67388 -3.98 28.32 3279 3279 MS2 18/28 Linfeng_091811_SIN3A_5.raw High VDALmDEINFmK 2 0 CID "M5(Oxidation), M11(Oxidation)" 59.58 4.86 1.00 1 2 729.33435 1457.66142 -2.57 33.67 3729 3729 MS2 19/22 Linfeng_091611_rIgG_9.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 96.87 4.83 1.00 1 2 851.40173 1701.79619 -0.70 32.74 7045 7045 MS2 19/28 Linfeng_081211_IgG_6.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 57.01 4.80 1.00 1 3 630.99500 1890.97043 -0.25 48.02 11597 11597 MS2 23/56 Linfeng_081211_IgG_8.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 72.81 4.79 1.00 1 3 630.99500 1890.97043 -0.25 47.93 5684 5684 MS2 25/56 Linfeng_091811_SIN3A_6.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 76.04 4.79 1.00 1 2 851.40192 1701.79656 -0.49 32.92 7086 7086 MS2 18/28 Linfeng_081211_IgG_7.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 64.45 4.77 1.00 1 2 729.33557 1457.66387 -0.90 34.10 7513 7513 MS2 19/22 Linfeng_081211_IgG_6.raw High VDALmDEINFmK 2 0 CID "M5(Oxidation), M11(Oxidation)" 57.24 4.74 1.00 1 2 729.33331 1457.65935 -3.99 33.68 3736 3736 MS2 19/22 Linfeng_091611_rIgG_1.raw High QNLEPLFEQYINNLR 10 0 CID 58.23 4.70 1.00 1 3 630.99518 1890.97098 0.04 47.46 5245 5245 MS2 27/56 Linfeng_091611_rIgG_10.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 59.05 4.66 1.00 1 2 705.84229 1410.67729 -1.56 36.70 5389 5389 MS2 19/28 Linfeng_081211_IgG_1.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 72.02 4.61 1.00 1 2 705.86444 1410.72161 -0.56 30.29 6381 6381 MS2 18/26 Linfeng_081211_IgG_3.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 73.77 4.61 1.00 1 2 705.86395 1410.72063 -1.25 29.33 5888 5888 MS2 15/26 Linfeng_081211_IgG_10.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 97.13 4.57 1.00 1 2 705.84314 1410.67900 -0.35 29.83 5680 5680 MS2 19/28 Linfeng_081211_IgG_2.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 53.26 4.54 1.00 1 2 705.86450 1410.72173 -0.47 30.55 5903 5903 MS2 15/26 Linfeng_081211_IgG_2.raw High SFSTASAITPSVSR 2 0 CID 71.37 4.54 1.00 1 2 705.86169 1410.71611 -4.45 29.02 3374 3374 MS2 22/26 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 125.00 4.53 1.00 1 2 705.84155 1410.67583 -2.60 28.47 5612 5612 MS2 19/28 Linfeng_081211_IgG_10.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 68.00 4.52 1.00 1 2 705.84210 1410.67693 -1.82 28.75 5487 5487 MS2 23/28 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 77.71 4.49 1.00 1 2 851.40253 1701.79778 0.23 32.68 6962 6962 MS2 17/28 Linfeng_081211_IgG_4.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 97.85 4.48 1.00 1 2 705.84137 1410.67546 -2.86 35.69 5182 5182 MS2 18/28 Linfeng_081211_IgG_1.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 72.94 4.47 1.00 1 2 729.33600 1457.66472 -0.31 40.67 6407 6407 MS2 17/22 Linfeng_081211_IgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 76.93 4.46 1.00 1 2 705.86407 1410.72087 -1.08 29.40 5913 5913 MS2 18/26 Linfeng_081211_IgG_6.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 65.64 4.46 1.00 1 3 567.93695 1701.79630 -0.64 33.53 7587 7587 MS2 27/56 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High VDALmDEINFmK 2 0 CID "M5(Oxidation), M11(Oxidation)" 55.77 4.44 1.00 1 2 729.33405 1457.66081 -2.99 33.87 3887 3887 MS2 18/22 Linfeng_091811_SIN3A_3.raw High SFSTASAITPSVSR 2 0 CID 53.08 4.43 1.00 1 2 705.86194 1410.71660 -4.10 29.13 3172 3172 MS2 15/26 Linfeng_091811_SIN3A_9.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 99.03 4.43 1.00 1 2 945.98785 1890.96843 -1.31 47.67 5651 5651 MS2 19/28 Linfeng_091811_SIN3A_1.raw High VSLAGAcGVGGYGSR 2 0 CID C7(Carbamidomethyl) 105.21 4.43 1.00 1 2 705.84070 1410.67412 -3.81 28.38 2972 2972 MS2 18/28 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 10 3 CID 66.89 4.38 1.00 1 3 630.99481 1890.96988 -0.54 47.86 5457 5457 MS2 23/56 Linfeng_091811_SIN3A_7.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 65.19 4.33 1.00 1 2 729.33521 1457.66313 -1.40 34.00 7368 7368 MS2 19/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High VDALmDEINFmK 2 0 CID "M5(Oxidation), M11(Oxidation)" 76.01 4.27 1.00 1 2 729.33496 1457.66265 -1.73 34.03 3931 3931 MS2 15/22 Linfeng_091811_SIN3A_4.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 89.16 4.25 1.00 1 2 729.33594 1457.66460 -0.39 33.70 7573 7573 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High VSLAGAcGVGGYGSR IPI:IPI00009867.3 2 1 CID C7(Carbamidomethyl) 43.93 4.24 1.00 1 2 705.84338 1410.67949 0.00 28.58 5568 5568 MS2 17/28 Linfeng_081211_IgG_4.raw High LAELEEALQK 2 0 CID 54.98 4.23 1.00 1 2 572.31445 1143.62163 -3.51 31.45 3448 3448 MS2 16/18 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High SRTEAESWYQTK IPI:IPI00009867.3 2 1 CID 52.68 4.22 1.00 1 2 743.35016 1485.69304 -2.59 24.45 4215 4215 MS2 17/22 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 13.32 4.22 1.00 1 3 567.93713 1701.79685 -0.32 32.88 7092 7092 MS2 19/56 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High YEELQQTAGR 2 0 CID 63.96 4.18 1.00 1 2 597.79028 1194.57329 -1.42 21.02 2039 2039 MS2 17/18 Linfeng_091611_rIgG_9.raw High VDALmDEINFmK 2 0 CID "M5(Oxidation), M11(Oxidation)" 63.32 4.18 1.00 1 2 729.33398 1457.66069 -3.07 33.76 3862 3862 MS2 19/22 Linfeng_091811_SIN3A_1.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High SRTEAESWYQTK IPI:IPI00009867.3 2 1 CID 43.95 4.11 1.00 1 2 743.35266 1485.69805 0.78 24.60 4366 4366 MS2 15/22 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 35.73 4.08 1.00 1 3 567.93610 1701.79374 -2.14 32.49 7144 7144 MS2 23/56 Linfeng_081211_IgG_8.raw High YEELQQTAGR 2 0 CID 41.33 4.07 1.00 1 2 597.78906 1194.57085 -3.46 21.10 2103 2103 MS2 17/18 Linfeng_091811_SIN3A_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 48.25 4.05 1.00 1 2 572.31567 1143.62407 -1.37 32.14 6821 6821 MS2 16/18 Linfeng_081211_IgG_6.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 55.69 4.02 1.00 1 2 572.31604 1143.62480 -0.73 32.87 7344 7344 MS2 16/18 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 49.25 3.99 1.00 1 2 597.79163 1194.57598 0.83 21.87 3646 3646 MS2 16/18 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 49.62 3.98 1.00 1 2 597.79211 1194.57695 1.65 23.08 3678 3678 MS2 16/18 Linfeng_081211_IgG_2.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 40.19 3.97 1.00 1 2 572.31586 1143.62444 -1.05 33.25 6710 6710 MS2 16/18 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 55.05 3.96 1.00 1 2 572.31604 1143.62480 -0.73 32.00 6729 6729 MS2 16/18 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 39.85 3.94 1.00 1 2 597.79144 1194.57561 0.53 22.18 3589 3589 MS2 16/18 Linfeng_081211_IgG_7.raw High QcANLQNAIADAEQR IPI:IPI00009867.3 2 1 CID C2(Carbamidomethyl) 43.32 3.92 1.00 1 2 851.40167 1701.79607 -0.77 34.03 6919 6919 MS2 17/28 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 66.54 3.91 1.00 1 2 621.78400 1242.56072 -2.43 27.77 5529 5529 MS2 16/18 Linfeng_081211_IgG_3.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 40.86 3.91 1.00 1 2 597.79071 1194.57414 -0.70 21.57 3632 3632 MS2 16/18 Linfeng_081211_IgG_8.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 47.95 3.90 1.00 1 2 572.31561 1143.62395 -1.48 31.76 6703 6703 MS2 16/18 Linfeng_081211_IgG_10.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 53.35 3.88 1.00 1 2 621.78369 1242.56011 -2.93 28.15 5245 5245 MS2 15/18 Linfeng_081211_IgG_2.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 35.91 3.87 1.00 1 2 597.79193 1194.57659 1.34 22.77 3885 3885 MS2 16/18 Linfeng_081211_IgG_3.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 38.04 3.85 1.00 1 2 597.79132 1194.57536 0.32 21.64 3618 3618 MS2 16/18 Linfeng_081211_IgG_6.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 60.76 3.84 1.00 1 2 597.78967 1194.57207 -2.44 22.05 3462 3462 MS2 17/18 Linfeng_081211_IgG_5.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 56.46 3.82 1.00 1 2 621.78552 1242.56377 0.02 31.92 4501 4501 MS2 15/18 Linfeng_081211_IgG_1.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 81.88 3.79 1.00 1 2 729.33545 1457.66362 -1.06 33.91 7356 7356 MS2 15/22 Linfeng_081211_IgG_4.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 43.01 3.79 1.00 1 2 597.79108 1194.57488 -0.09 23.83 2925 2925 MS2 15/18 Linfeng_081211_IgG_1.raw High SGGGGGGGFGR IPI:IPI00009867.3 2 1 CID 43.90 3.79 1.00 1 2 433.19958 865.39189 0.83 16.36 1796 1796 MS2 17/20 Linfeng_081211_IgG_4.raw High SGGGGGGGFGR IPI:IPI00009867.3 2 1 CID 54.86 3.79 1.00 1 2 433.19888 865.39049 -0.79 17.07 2002 2002 MS2 16/20 Linfeng_081211_IgG_3.raw High GLGVGFGSGGGSSSSVK IPI:IPI00009867.3 2 1 CID 26.35 3.79 1.00 1 2 720.36035 1439.71343 0.59 29.01 5716 5716 MS2 18/32 Linfeng_081211_IgG_4.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 57.07 3.78 1.00 1 2 627.78632 1254.56536 -1.43 31.96 6609 6609 MS2 15/18 Linfeng_081211_IgG_5.raw High SRTEAESWYQTK IPI:IPI00009867.3 2 1 CID 64.50 3.77 1.00 1 2 743.35175 1485.69621 -0.46 24.73 4404 4404 MS2 14/22 Linfeng_081211_IgG_7.raw High GLGVGFGSGGGSSSSVK IPI:IPI00009867.3 2 1 CID 42.97 3.76 1.00 1 2 720.36023 1439.71318 0.42 30.23 5810 5810 MS2 19/32 Linfeng_081211_IgG_2.raw High VDALmDEINFmK IPI:IPI00009867.3 2 1 CID "M5(Oxidation), M11(Oxidation)" 90.83 3.75 1.00 1 2 729.33600 1457.66472 -0.31 35.13 7211 7211 MS2 17/22 Linfeng_081211_IgG_2.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 42.67 3.71 1.00 1 2 597.79132 1194.57536 0.32 22.82 2683 2683 MS2 15/18 Linfeng_081211_IgG_1.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 59.33 3.71 1.00 1 2 572.31580 1143.62432 -1.16 31.98 6616 6616 MS2 16/18 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 52.94 3.70 1.00 1 2 572.31525 1143.62322 -2.12 35.16 5855 5855 MS2 16/18 Linfeng_081211_IgG_9.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 55.75 3.70 1.00 1 2 621.78387 1242.56047 -2.63 27.05 5101 5101 MS2 14/18 Linfeng_081211_IgG_4.raw High TTAENEFVmLK IPI:IPI00009867.3 2 1 CID M9(Oxidation) 33.08 3.68 1.00 1 2 649.81702 1298.62676 -2.30 30.78 6546 6546 MS2 15/20 Linfeng_081211_IgG_8.raw High TTAENEFVmLK IPI:IPI00009867.3 2 1 CID M9(Oxidation) 43.89 3.68 1.00 1 2 649.81689 1298.62651 -2.49 30.89 6286 6286 MS2 16/20 Linfeng_081211_IgG_5.raw High SFSTASAITPSVSR IPI:IPI00009867.3 2 1 CID 65.87 3.67 1.00 1 2 705.86328 1410.71929 -2.20 37.38 5529 5529 MS2 13/26 Linfeng_081211_IgG_1.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 43.00 3.66 1.00 1 2 627.78680 1254.56633 -0.65 31.94 6709 6709 MS2 15/18 Linfeng_081211_IgG_4.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 63.47 3.65 1.00 1 2 621.78375 1242.56023 -2.83 26.79 5085 5085 MS2 15/18 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High TTAENEFVmLK IPI:IPI00009867.3 2 1 CID M9(Oxidation) 35.06 3.62 1.00 1 2 649.81775 1298.62822 -1.17 31.24 6484 6484 MS2 15/20 Linfeng_081211_IgG_7.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 29.12 3.62 1.00 1 2 602.32135 1203.63542 -1.19 42.71 6992 6992 MS2 17/18 Linfeng_081211_IgG_1.raw High QNLEPLFEQYINNLR IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 65.44 3.61 1.00 1 2 945.98969 1890.97209 0.63 48.10 11610 11610 MS2 15/28 Linfeng_081211_IgG_8.raw High EYQELmNTK IPI:IPI00009867.3 2 1 CID M6(Oxidation) 25.13 3.61 1.00 1 2 586.26727 1171.52727 -2.34 21.11 3167 3167 MS2 13/16 Linfeng_081211_IgG_5.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High SGGGGGGGFGR IPI:IPI00009867.3 2 1 CID 50.80 3.60 1.00 1 2 433.19940 865.39153 0.41 15.90 1849 1849 MS2 18/20 Linfeng_081211_IgG_8.raw High WTLLQEQGTK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 10 5 CID 44.30 3.60 1.00 1 2 602.32190 1203.63652 -0.28 33.25 7208 7208 MS2 14/18 Linfeng_081211_IgG_7.raw High TTAENEFVmLK IPI:IPI00009867.3 2 1 CID M9(Oxidation) 49.45 3.59 1.00 1 2 649.81647 1298.62566 -3.15 32.06 7030 7030 MS2 16/20 Linfeng_081211_IgG_3.raw High SGGGGGGGFGR IPI:IPI00009867.3 2 1 CID 36.44 3.59 1.00 1 2 433.19925 865.39122 0.06 17.33 1942 1942 MS2 17/20 Linfeng_081211_IgG_2.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 49.33 3.58 1.00 1 2 572.31555 1143.62383 -1.59 40.62 6393 6393 MS2 16/18 Linfeng_081211_IgG_1.raw High YEELQQTAGR IPI:IPI00009867.3 2 1 CID 37.64 3.57 1.00 1 2 597.79181 1194.57634 1.14 21.84 3468 3468 MS2 15/18 Linfeng_081211_IgG_4.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 48.60 3.55 1.00 1 2 621.78479 1242.56230 -1.16 26.86 5111 5111 MS2 14/18 Linfeng_081211_IgG_10.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 64.98 3.54 1.00 1 2 627.78674 1254.56621 -0.75 31.94 6756 6756 MS2 15/18 Linfeng_081211_IgG_6.raw High LAELEEALQK IPI:IPI00009867.3 2 1 CID 36.60 3.53 1.00 1 2 572.31616 1143.62505 -0.52 41.63 6683 6683 MS2 15/18 Linfeng_081211_IgG_1.raw High TTAENEFVmLK IPI:IPI00009867.3 2 1 CID M9(Oxidation) 53.64 3.53 1.00 1 2 649.81635 1298.62541 -3.34 31.18 6531 6531 MS2 16/20 Linfeng_081211_IgG_6.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 48.23 3.52 1.00 1 2 627.78674 1254.56621 -0.75 32.91 7357 7357 MS2 15/18 Linfeng_081211_IgG_3.raw High SGGGGGGGFGR IPI:IPI00009867.3 2 1 CID 59.34 3.52 1.00 1 2 433.19901 865.39073 -0.51 15.97 1873 1873 MS2 16/20 Linfeng_081211_IgG_6.raw High DVDAAYmNK IPI:IPI00009867.3;IPI:IPI00293665.9;IPI:IPI00793641.1;IPI:IPI00909059.5;IPI:IPI00956313.1 15 5 CID M7(Oxidation) 39.94 3.51 1.00 1 2 521.72980 1042.45232 1.23 20.17 2089 2089 MS2 13/16 Linfeng_081211_IgG_1.raw High ISISTSGGSFR IPI:IPI00009867.3 1 1 CID 47.96 3.50 1.00 1 2 556.28998 1111.57268 -1.42 29.99 5738 5738 MS2 16/20 Linfeng_081211_IgG_2.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 47.18 3.50 1.00 1 2 627.78656 1254.56584 -1.04 31.58 6828 6828 MS2 15/18 Linfeng_081211_IgG_8.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 51.15 3.49 1.00 1 2 627.78619 1254.56511 -1.62 32.04 6762 6762 MS2 14/18 Linfeng_081211_IgG_7.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 49.16 3.49 1.00 1 2 621.78473 1242.56218 -1.26 27.18 5122 5122 MS2 15/18 Linfeng_081211_IgG_7.raw High AQYEEIANR IPI:IPI00009867.3 2 1 CID 42.72 3.47 1.00 1 2 547.26617 1093.52507 -2.04 25.94 3373 3373 MS2 14/16 Linfeng_081211_IgG_1.raw High NmQDLVEDFK IPI:IPI00009867.3 2 1 CID M2(Oxidation) 46.47 3.47 1.00 1 2 627.78699 1254.56670 -0.36 39.81 6151 6151 MS2 14/18 Linfeng_081211_IgG_1.raw High TEAESWYQTK IPI:IPI00009867.3 2 1 CID 41.06 3.47 1.00 1 2 621.78406 1242.56084 -2.34 27.33 4407 4407 MS2 15/18 Linfeng_081211_IgG_9.raw IPI:IPI00384444.6 472 51.5 5.16 "Keratin, type I cytoskeletal 14" 52.54 223 19 1182.01 50.42 124 18 657.82 34.32 45 10 732.41 39.83 54 12 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 300.00 7.89 1.00 1 3 770.35718 2309.05698 -3.09 27.85 2979 2979 MS2 38/84 Linfeng_091611_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 113.63 7.56 1.00 1 3 770.35815 2309.05991 -1.82 28.55 5411 5411 MS2 35/84 Linfeng_081211_IgG_5.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 136.65 7.42 1.00 1 3 770.35669 2309.05552 -3.72 28.05 3243 3243 MS2 38/84 Linfeng_091811_SIN3A_5.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 141.42 7.41 1.00 1 3 770.35809 2309.05973 -1.90 27.79 2755 2755 MS2 34/84 Linfeng_091611_rIgG_10.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 112.99 7.35 1.00 1 3 770.35754 2309.05808 -2.61 28.18 5641 5641 MS2 38/84 Linfeng_081211_IgG_8.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 138.41 7.33 1.00 1 3 770.35754 2309.05808 -2.61 27.97 3100 3100 MS2 38/84 Linfeng_091811_SIN3A_3.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 141.42 7.28 1.00 1 3 770.35602 2309.05350 -4.60 28.12 3073 3073 MS2 38/84 Linfeng_091811_SIN3A_2.raw High YcmQLAQIQEmIGSVEEQLAQLR 3 0 CID "C2(Carbamidomethyl), M3(Oxidation), M11(Oxidation)" 143.21 7.16 1.00 1 3 924.11182 2770.32090 -0.03 52.69 6173 6173 MS2 34/88 Linfeng_091611_rIgG_1.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 148.41 7.15 1.00 1 3 770.35962 2309.06430 0.08 29.57 6110 6110 MS2 34/84 Linfeng_081211_IgG_3.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 300.00 7.14 1.00 1 3 770.35657 2309.05515 -3.88 28.11 3132 3132 MS2 34/84 Linfeng_091811_SIN3A_6.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 145.40 7.13 1.00 1 3 770.35712 2309.05680 -3.17 27.85 3073 3073 MS2 37/84 Linfeng_091811_SIN3A_1.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 140.62 7.12 1.00 1 3 770.35718 2309.05698 -3.09 27.76 2962 2962 MS2 37/84 Linfeng_091611_rIgG_1.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 122.94 7.10 1.00 1 3 770.35669 2309.05552 -3.72 28.06 2902 2902 MS2 39/84 Linfeng_091811_SIN3A_7.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 106.51 7.04 1.00 1 3 770.35742 2309.05771 -2.77 27.88 3139 3139 MS2 36/84 Linfeng_091611_rIgG_5.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 129.31 6.94 1.00 1 3 770.35712 2309.05680 -3.17 27.87 2975 2975 MS2 38/84 Linfeng_091611_rIgG_9.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 110.14 6.76 1.00 1 3 770.35931 2309.06339 -0.31 28.68 5585 5585 MS2 34/84 Linfeng_081211_IgG_7.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 114.93 6.67 1.00 1 3 770.35724 2309.05716 -3.01 27.74 2585 2585 MS2 29/84 Linfeng_091611_rIgG_3.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 99.37 6.65 1.00 1 3 770.35669 2309.05552 -3.72 28.12 3033 3033 MS2 32/84 Linfeng_091811_SIN3A_9.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 43.87 6.44 1.00 1 3 685.37714 2054.11686 -3.55 41.26 4841 4841 MS2 31/72 Linfeng_091811_SIN3A_1.raw High YcmQLAQIQEmIGSVEEQLAQLR IPI:IPI00384444.6 3 1 CID "C2(Carbamidomethyl), M3(Oxidation), M11(Oxidation)" 87.80 6.41 1.00 1 3 924.11359 2770.32621 1.89 51.86 12169 12169 MS2 25/88 Linfeng_081211_IgG_5.raw High LLEGEDAHLSSSQFSSGSQSSR 4 0 CID 126.20 6.40 1.00 1 3 770.35669 2309.05552 -3.72 27.79 3160 3160 MS2 33/84 Linfeng_091611_rIgG_4.raw High YcmQLAQIQEmIGSVEEQLAQLR 3 0 CID "C2(Carbamidomethyl), M3(Oxidation), M11(Oxidation)" 132.20 6.35 1.00 1 3 924.11304 2770.32456 1.29 52.74 5737 5737 MS2 29/88 Linfeng_091611_rIgG_3.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 68.51 6.33 1.00 1 3 685.37909 2054.12271 -0.69 40.63 9389 9389 MS2 29/72 Linfeng_081211_IgG_5.raw High YcmQLAQIQEmIGSVEEQLAQLR IPI:IPI00384444.6 3 1 CID "C2(Carbamidomethyl), M3(Oxidation), M11(Oxidation)" 106.91 6.11 1.00 1 3 924.11139 2770.31961 -0.49 53.01 6295 6295 MS2 30/88 Linfeng_091811_SIN3A_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 147.50 6.06 1.00 1 2 1051.49084 2101.97441 -3.61 31.31 3540 3540 MS2 22/40 Linfeng_091811_SIN3A_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 124.14 5.87 1.00 1 2 1051.49146 2101.97563 -3.03 32.07 7033 7033 MS2 23/40 Linfeng_081211_IgG_3.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 98.63 5.84 1.00 1 3 770.35931 2309.06339 -0.31 28.63 5655 5655 MS2 31/84 Linfeng_081211_IgG_6.raw High GQVGGDVNVEMDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 137.37 5.84 1.00 1 2 1043.49573 2085.98418 -1.40 39.69 6113 6113 MS2 21/40 Linfeng_081211_IgG_1.raw High ILTATVDNANVLLQIDNAR 5 0 CID 91.97 5.77 1.00 1 3 685.37695 2054.11631 -3.81 40.74 4240 4240 MS2 35/72 Linfeng_091611_rIgG_3.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 120.31 5.74 1.00 1 3 770.35944 2309.06375 -0.15 28.42 5516 5516 MS2 28/84 Linfeng_081211_IgG_4.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 104.90 5.72 1.00 1 3 770.35870 2309.06156 -1.11 28.36 5572 5572 MS2 32/84 Linfeng_081211_IgG_10.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 77.26 5.72 1.00 1 3 685.38037 2054.12656 1.18 40.78 9746 9746 MS2 33/72 Linfeng_081211_IgG_7.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 127.98 5.68 1.00 1 2 1051.49072 2101.97417 -3.73 31.35 6561 6561 MS2 20/40 Linfeng_081211_IgG_6.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 49.13 5.67 1.00 1 2 962.97119 1924.93511 -0.22 43.57 7230 7230 MS2 17/30 Linfeng_081211_IgG_1.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 68.38 5.65 1.00 1 3 685.37939 2054.12363 -0.25 40.67 9768 9768 MS2 25/72 Linfeng_081211_IgG_8.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 41.86 5.55 1.00 1 3 685.38165 2054.13041 3.05 47.17 8324 8324 MS2 31/72 Linfeng_081211_IgG_1.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 100.51 5.53 1.00 1 2 1027.56738 2054.12749 1.63 47.21 8335 8335 MS2 19/36 Linfeng_081211_IgG_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 119.40 5.52 1.00 1 2 1051.49231 2101.97734 -2.22 31.14 6670 6670 MS2 23/40 Linfeng_081211_IgG_8.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 89.18 5.39 1.00 1 2 1051.49353 2101.97978 -1.06 31.27 6504 6504 MS2 23/40 Linfeng_081211_IgG_4.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 48.59 5.38 1.00 1 3 685.38068 2054.12748 1.62 41.88 9970 9970 MS2 26/72 Linfeng_081211_IgG_6.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 139.02 5.38 1.00 1 2 1051.49341 2101.97954 -1.17 31.50 6431 6431 MS2 26/40 Linfeng_081211_IgG_5.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 64.52 5.27 1.00 1 3 701.33032 2101.97641 -2.66 31.27 3547 3547 MS2 33/80 Linfeng_091811_SIN3A_3.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 45.96 5.26 1.00 1 3 685.37982 2054.12491 0.38 40.50 9595 9595 MS2 23/72 Linfeng_081211_IgG_10.raw High LLEGEDAHLSSSQFSSGSQSSR IPI:IPI00384444.6 4 1 CID 75.47 5.25 1.00 1 3 770.35864 2309.06137 -1.19 31.73 6262 6262 MS2 27/84 Linfeng_081211_IgG_2.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 118.49 5.18 1.00 1 2 713.34918 1425.69109 -4.08 25.05 2698 2698 MS2 19/28 Linfeng_091811_SIN3A_1.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 73.46 5.18 1.00 1 2 962.97180 1924.93633 0.41 36.86 8246 8246 MS2 17/30 Linfeng_081211_IgG_4.raw High APSTYGGGLSVSSSR 2 0 CID 107.91 5.12 1.00 1 2 713.34979 1425.69231 -3.22 25.01 2599 2599 MS2 19/28 Linfeng_091611_rIgG_1.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 66.46 5.10 1.00 1 2 962.97046 1924.93364 -0.98 36.84 8237 8237 MS2 18/30 Linfeng_081211_IgG_4.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 73.25 5.06 1.00 1 2 1051.49109 2101.97490 -3.38 31.51 6581 6581 MS2 18/40 Linfeng_081211_IgG_7.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 38.39 5.02 1.00 1 3 642.31653 1924.93503 -0.26 43.45 7196 7196 MS2 25/60 Linfeng_081211_IgG_1.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 109.15 5.00 1.00 1 2 713.34991 1425.69255 -3.05 25.41 2764 2764 MS2 20/28 Linfeng_091811_SIN3A_6.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 107.12 4.97 1.00 1 2 713.35059 1425.69390 -2.11 25.30 2665 2665 MS2 17/28 Linfeng_091811_SIN3A_9.raw High GQVGGDVNVEmDAAPGVDLSR 4 0 CID M11(Oxidation) 58.87 4.95 1.00 1 3 701.33124 2101.97916 -1.35 31.21 3417 3417 MS2 28/80 Linfeng_091611_rIgG_9.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 102.72 4.93 1.00 1 3 701.32959 2101.97422 -3.71 31.36 6564 6564 MS2 31/80 Linfeng_081211_IgG_6.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 85.40 4.93 1.00 1 3 701.33124 2101.97916 -1.35 31.18 6684 6684 MS2 28/80 Linfeng_081211_IgG_8.raw High APSTYGGGLSVSSSR 2 0 CID 123.54 4.91 1.00 1 2 713.35034 1425.69341 -2.45 25.03 2865 2865 MS2 20/28 Linfeng_091611_rIgG_8.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 42.36 4.86 1.00 1 3 701.33179 2101.98081 -0.57 31.27 6503 6503 MS2 30/80 Linfeng_081211_IgG_4.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 49.06 4.85 1.00 1 3 642.31390 1924.92716 -4.35 37.23 4288 4288 MS2 22/60 Linfeng_091811_SIN3A_2.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 105.74 4.85 1.00 1 2 1051.49426 2101.98125 -0.36 32.32 6424 6424 MS2 19/40 Linfeng_081211_IgG_2.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 59.85 4.85 1.00 1 2 651.32947 1301.65166 -5.19 27.27 2960 2960 MS2 18/22 Linfeng_091811_SIN3A_2.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 81.43 4.82 1.00 1 2 639.79614 1278.58501 -0.47 22.27 3849 3849 MS2 20/28 Linfeng_081211_IgG_8.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 118.05 4.77 1.00 1 2 713.34985 1425.69243 -3.14 25.32 2555 2555 MS2 19/28 Linfeng_091811_SIN3A_10.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 110.59 4.76 1.00 1 2 713.34955 1425.69182 -3.56 25.17 2844 2844 MS2 19/28 Linfeng_091811_SIN3A_5.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.27 4.75 1.00 1 2 651.32880 1301.65032 -6.22 27.15 2979 2979 MS2 19/22 Linfeng_091811_SIN3A_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 52.82 4.74 1.00 1 2 1051.49170 2101.97612 -2.80 35.36 5126 5126 MS2 15/40 Linfeng_081211_IgG_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 102.74 4.74 1.00 1 2 639.79480 1278.58232 -2.57 21.65 2219 2219 MS2 22/28 Linfeng_091811_SIN3A_1.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 53.47 4.74 1.00 1 2 681.34851 1361.68974 -0.75 22.89 3683 3683 MS2 19/24 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 66.08 4.73 1.00 1 2 681.34686 1361.68645 -3.17 21.73 2231 2231 MS2 18/24 Linfeng_091811_SIN3A_1.raw High EVATNSELVQSGK 7 0 CID 50.50 4.72 1.00 1 2 681.34760 1361.68791 -2.09 21.80 2222 2222 MS2 18/24 Linfeng_091611_rIgG_7.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 32.95 4.71 1.00 1 3 685.37518 2054.11100 -6.40 41.12 4793 4793 MS2 27/72 Linfeng_091811_SIN3A_2.raw High EVATNSELVQSGK 7 0 CID 66.45 4.69 1.00 1 2 681.34534 1361.68340 -5.41 21.87 2424 2424 MS2 19/24 Linfeng_091611_rIgG_8.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID M11(Oxidation) 69.69 4.68 1.00 1 3 701.33020 2101.97605 -2.83 32.09 7039 7039 MS2 27/80 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.33 4.68 1.00 1 2 651.33307 1301.65886 0.35 34.79 5016 5016 MS2 18/22 Linfeng_081211_IgG_1.raw High EVATNSELVQSGK 7 0 CID 61.40 4.68 1.00 1 2 681.34827 1361.68926 -1.11 21.78 2146 2146 MS2 17/24 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 68.05 4.68 1.00 1 2 651.33020 1301.65312 -4.06 27.17 2879 2879 MS2 18/22 Linfeng_091611_rIgG_9.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 72.33 4.66 1.00 1 2 651.33154 1301.65581 -2.00 27.07 2659 2659 MS2 18/22 Linfeng_091611_rIgG_10.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 60.70 4.65 1.00 1 3 642.31635 1924.93448 -0.54 36.70 8198 8198 MS2 28/60 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK 7 0 CID 63.72 4.65 1.00 1 2 681.34723 1361.68718 -2.63 21.85 2150 2150 MS2 18/24 Linfeng_091611_rIgG_2.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 62.16 4.65 1.00 1 2 681.34821 1361.68913 -1.19 22.44 3853 3853 MS2 17/24 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 55.69 4.64 1.00 1 2 651.32935 1301.65141 -5.38 27.06 3062 3062 MS2 18/22 Linfeng_091611_rIgG_4.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 59.24 4.64 1.00 1 2 681.34674 1361.68620 -3.35 21.98 2402 2402 MS2 20/24 Linfeng_091811_SIN3A_5.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 79.78 4.64 1.00 1 2 639.79419 1278.58110 -3.52 21.90 2391 2391 MS2 22/28 Linfeng_091811_SIN3A_5.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 37.25 4.63 1.00 1 3 685.38019 2054.12601 0.91 41.95 10522 10522 MS2 24/72 Linfeng_081211_IgG_3.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 58.14 4.63 1.00 1 2 681.34839 1361.68950 -0.93 23.96 3974 3974 MS2 18/24 Linfeng_081211_IgG_2.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 72.04 4.63 1.00 1 2 681.34875 1361.69023 -0.39 22.67 3731 3731 MS2 17/24 Linfeng_081211_IgG_4.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.47 4.62 1.00 1 2 651.33142 1301.65557 -2.19 27.48 5414 5414 MS2 19/22 Linfeng_081211_IgG_8.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.51 4.60 1.00 1 2 681.34613 1361.68498 -4.24 21.96 2220 2220 MS2 20/24 Linfeng_091811_SIN3A_2.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 55.88 4.60 1.00 1 2 651.32861 1301.64995 -6.50 27.34 2804 2804 MS2 18/22 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 64.41 4.59 1.00 1 2 651.32947 1301.65166 -5.19 27.18 2962 2962 MS2 18/22 Linfeng_091611_rIgG_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 61.79 4.59 1.00 1 2 651.32855 1301.64983 -6.59 27.44 2939 2939 MS2 18/22 Linfeng_091811_SIN3A_9.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 68.08 4.58 1.00 1 2 681.34637 1361.68547 -3.88 21.84 2047 2047 MS2 19/24 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 56.82 4.57 1.00 1 2 651.32880 1301.65032 -6.22 27.21 2997 2997 MS2 19/22 Linfeng_091811_SIN3A_3.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 66.95 4.57 1.00 1 2 681.35010 1361.69292 1.58 24.53 3070 3070 MS2 18/24 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 54.13 4.57 1.00 1 2 651.32971 1301.65215 -4.81 27.08 2872 2872 MS2 19/22 Linfeng_091611_rIgG_1.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 116.57 4.56 1.00 1 2 713.35309 1425.69890 1.40 25.49 4747 4747 MS2 20/28 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 58.13 4.56 1.00 1 2 651.32935 1301.65141 -5.38 27.12 2881 2881 MS2 19/22 Linfeng_091611_rIgG_2.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 51.12 4.56 1.00 1 3 642.31628 1924.93430 -0.64 36.81 8226 8226 MS2 24/60 Linfeng_081211_IgG_4.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 59.69 4.55 1.00 1 2 651.33038 1301.65349 -3.78 27.24 3053 3053 MS2 18/22 Linfeng_091611_rIgG_5.raw High EVATNSELVQSGK 7 0 CID 75.37 4.54 1.00 1 2 681.34729 1361.68730 -2.54 21.74 2145 2145 MS2 19/24 Linfeng_091611_rIgG_1.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 134.97 4.54 1.00 1 2 713.35120 1425.69512 -1.25 25.85 4559 4559 MS2 20/28 Linfeng_081211_IgG_5.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 70.10 4.54 1.00 1 2 651.32886 1301.65044 -6.13 27.42 2839 2839 MS2 17/22 Linfeng_091811_SIN3A_10.raw High EVATNSELVQSGK 7 0 CID 71.17 4.54 1.00 1 2 681.34741 1361.68755 -2.36 21.92 2293 2293 MS2 20/24 Linfeng_091611_rIgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 60.45 4.53 1.00 1 2 651.33209 1301.65691 -1.15 29.01 5430 5430 MS2 18/22 Linfeng_081211_IgG_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 64.92 4.53 1.00 1 2 651.33112 1301.65495 -2.66 27.98 5347 5347 MS2 18/22 Linfeng_081211_IgG_7.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 81.59 4.53 1.00 1 2 639.79498 1278.58269 -2.28 21.64 2130 2130 MS2 22/28 Linfeng_091611_rIgG_1.raw High APSTYGGGLSVSSSR 2 0 CID 122.71 4.53 1.00 1 2 713.35010 1425.69292 -2.79 25.23 2750 2750 MS2 19/28 Linfeng_091611_rIgG_6.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 68.68 4.51 1.00 1 2 639.79437 1278.58147 -3.24 21.79 2196 2196 MS2 22/28 Linfeng_091811_SIN3A_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 59.19 4.50 1.00 1 2 651.33142 1301.65557 -2.19 28.01 5221 5221 MS2 17/22 Linfeng_081211_IgG_5.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 94.39 4.49 1.00 1 2 713.35217 1425.69707 0.12 26.56 5173 5173 MS2 20/28 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 100.32 4.49 1.00 1 2 639.79620 1278.58513 -0.37 23.56 4165 4165 MS2 21/28 Linfeng_081211_IgG_3.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 104.41 4.48 1.00 1 2 713.34998 1425.69267 -2.96 25.24 2522 2522 MS2 19/28 Linfeng_091811_SIN3A_7.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 60.18 4.48 1.00 1 2 681.34875 1361.69023 -0.39 23.53 2855 2855 MS2 20/24 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 65.34 4.48 1.00 1 2 651.32990 1301.65251 -4.53 27.36 3043 3043 MS2 17/22 Linfeng_091611_rIgG_6.raw High APSTYGGGLSVSSSR 2 0 CID 86.78 4.47 1.00 1 2 713.34979 1425.69231 -3.22 25.09 2762 2762 MS2 17/28 Linfeng_091611_rIgG_5.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 71.18 4.47 1.00 1 2 651.33154 1301.65581 -2.00 32.77 4658 4658 MS2 18/22 Linfeng_081211_IgG_1.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 109.33 4.46 1.00 1 2 713.35016 1425.69304 -2.71 25.26 2724 2724 MS2 19/28 Linfeng_091811_SIN3A_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 87.61 4.46 1.00 1 2 639.79468 1278.58208 -2.76 21.91 2253 2253 MS2 22/28 Linfeng_091811_SIN3A_3.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 62.31 4.45 1.00 1 2 651.32990 1301.65251 -4.53 27.07 2497 2497 MS2 18/22 Linfeng_091611_rIgG_3.raw High EVATNSELVQSGK 7 0 CID 67.13 4.45 1.00 1 2 681.34790 1361.68852 -1.64 21.93 2335 2335 MS2 19/24 Linfeng_091611_rIgG_5.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 53.96 4.45 1.00 1 2 651.33258 1301.65788 -0.40 27.71 5349 5349 MS2 17/22 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 63.91 4.45 1.00 1 2 651.33215 1301.65703 -1.06 35.90 5221 5221 MS2 17/22 Linfeng_081211_IgG_1.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 72.94 4.45 1.00 1 2 681.34711 1361.68694 -2.81 22.08 2300 2300 MS2 18/24 Linfeng_091811_SIN3A_6.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 124.09 4.44 1.00 1 2 713.34998 1425.69267 -2.96 25.17 2666 2666 MS2 20/28 Linfeng_091811_SIN3A_2.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 47.28 4.43 1.00 1 2 639.79572 1278.58415 -1.14 22.42 3847 3847 MS2 21/28 Linfeng_081211_IgG_6.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 57.77 4.42 1.00 1 2 651.32886 1301.65044 -6.13 27.38 3031 3031 MS2 17/22 Linfeng_091811_SIN3A_6.raw High APSTYGGGLSVSSSR 2 0 CID 118.39 4.42 1.00 1 2 713.35095 1425.69463 -1.59 24.92 2211 2211 MS2 20/28 Linfeng_091611_rIgG_3.raw High APSTYGGGLSVSSSR 2 0 CID 107.97 4.41 1.00 1 2 713.34998 1425.69267 -2.96 25.02 2595 2595 MS2 18/28 Linfeng_091611_rIgG_2.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 70.71 4.41 1.00 1 2 553.78394 1106.56059 -1.56 24.35 4176 4176 MS2 17/20 Linfeng_081211_IgG_5.raw High APSTYGGGLSVSSSR 2 0 CID 96.62 4.40 1.00 1 2 713.35059 1425.69390 -2.11 25.11 2684 2684 MS2 18/28 Linfeng_091611_rIgG_7.raw High APSTYGGGLSVSSSR 2 0 CID 101.18 4.40 1.00 1 2 713.35059 1425.69390 -2.11 25.01 2597 2597 MS2 21/28 Linfeng_091611_rIgG_9.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 64.97 4.40 1.00 1 2 713.35022 1425.69316 -2.62 25.40 2776 2776 MS2 19/28 Linfeng_091811_SIN3A_4.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.02 4.40 1.00 1 2 681.34717 1361.68706 -2.72 21.85 2065 2065 MS2 17/24 Linfeng_091811_SIN3A_10.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 42.31 4.40 1.00 1 2 690.36438 1379.72148 -4.58 28.45 3298 3298 MS2 17/20 Linfeng_091811_SIN3A_5.raw High ALEEANADLEVK IPI:IPI00217963.3 19 1 CID 69.36 4.40 1.00 1 2 651.33057 1301.65386 -3.50 27.30 3174 3174 MS2 17/22 Linfeng_091611_rIgG_8.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 81.79 4.39 1.00 1 2 639.79510 1278.58293 -2.09 21.66 2122 2122 MS2 22/28 Linfeng_091611_rIgG_2.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 58.45 4.39 1.00 1 2 681.34705 1361.68682 -2.90 21.99 2265 2265 MS2 19/24 Linfeng_091811_SIN3A_3.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 28.85 4.39 1.00 1 2 553.78375 1106.56023 -1.90 23.46 2454 2454 MS2 17/20 Linfeng_091611_rIgG_7.raw High TKYETELNLR IPI:IPI00384444.6 4 1 CID 36.70 4.39 1.00 1 3 422.89310 1266.66474 -3.27 25.59 2770 2770 MS2 22/36 Linfeng_091811_SIN3A_3.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 62.23 4.39 1.00 1 2 681.34894 1361.69060 -0.12 22.27 3850 3850 MS2 15/24 Linfeng_081211_IgG_8.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.14 4.38 1.00 1 2 651.33130 1301.65532 -2.37 33.79 4838 4838 MS2 18/22 Linfeng_081211_IgG_1.raw High GQVGGDVNVEmDAAPGVDLSR IPI:IPI00384444.6 4 1 CID M11(Oxidation) 56.21 4.38 1.00 1 3 701.32953 2101.97403 -3.79 31.29 3537 3537 MS2 31/80 Linfeng_091811_SIN3A_1.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 34.94 4.36 1.00 1 3 642.31482 1924.92990 -2.92 37.09 4299 4299 MS2 25/60 Linfeng_091811_SIN3A_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 84.30 4.35 1.00 1 2 639.79572 1278.58415 -1.14 22.88 3813 3813 MS2 18/28 Linfeng_081211_IgG_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 60.06 4.35 1.00 1 2 651.32880 1301.65032 -6.22 27.36 3047 3047 MS2 17/22 Linfeng_091811_SIN3A_4.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 95.09 4.34 1.00 1 2 713.35187 1425.69646 -0.31 25.87 4768 4768 MS2 18/28 Linfeng_081211_IgG_7.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.62 4.32 1.00 1 2 651.33185 1301.65642 -1.53 29.74 6175 6175 MS2 17/22 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 55.03 4.31 1.00 1 2 651.33197 1301.65666 -1.34 27.87 5345 5345 MS2 17/22 Linfeng_081211_IgG_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 64.16 4.31 1.00 1 2 639.79456 1278.58183 -2.95 21.73 2321 2321 MS2 15/28 Linfeng_091611_rIgG_4.raw High TRLEQEIATYR IPI:IPI00217963.3;IPI:IPI00384444.6 14 2 CID 51.90 4.31 1.00 1 2 690.36426 1379.72124 -4.76 28.32 3137 3137 MS2 17/20 Linfeng_091811_SIN3A_1.raw High TmQNLEIELQSQLSmK IPI:IPI00384444.6 2 1 CID "M2(Oxidation), M15(Oxidation)" 79.00 4.31 1.00 1 3 642.31720 1924.93705 0.79 37.39 8614 8614 MS2 21/60 Linfeng_081211_IgG_6.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 73.37 4.31 1.00 1 2 681.34735 1361.68743 -2.45 22.05 2303 2303 MS2 18/24 Linfeng_091811_SIN3A_4.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 66.95 4.30 1.00 1 2 553.78528 1106.56328 0.86 24.52 4332 4332 MS2 17/20 Linfeng_081211_IgG_4.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 73.94 4.29 1.00 1 2 553.78265 1106.55803 -3.88 23.30 2362 2362 MS2 18/20 Linfeng_091611_rIgG_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 47.82 4.29 1.00 1 2 690.36652 1379.72576 -1.48 29.08 5745 5745 MS2 17/20 Linfeng_081211_IgG_4.raw High EVATNSELVQSGK 7 0 CID 61.76 4.29 1.00 1 2 681.34692 1361.68657 -3.08 21.82 2333 2333 MS2 18/24 Linfeng_091611_rIgG_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 46.66 4.29 1.00 1 2 639.79633 1278.58537 -0.18 23.79 3915 3915 MS2 19/28 Linfeng_081211_IgG_2.raw High TKYETELNLR IPI:IPI00384444.6 4 1 CID 43.25 4.28 1.00 1 3 422.89243 1266.66272 -4.86 25.60 2573 2573 MS2 22/36 Linfeng_091811_SIN3A_7.raw High ALEEANADLEVK IPI:IPI00217963.3;IPI:IPI00384444.6 19 2 CID 66.16 4.27 1.00 1 2 651.32928 1301.65129 -5.47 27.30 3140 3140 MS2 18/22 Linfeng_091811_SIN3A_5.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 29.96 4.26 1.00 1 3 475.90356 1425.69614 -0.53 26.64 5193 5193 MS2 21/56 Linfeng_081211_IgG_3.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 75.48 4.25 1.00 1 2 553.78387 1106.56047 -1.67 25.59 4480 4480 MS2 17/20 Linfeng_081211_IgG_2.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 50.42 4.25 1.00 1 2 690.36621 1379.72515 -1.93 28.87 5534 5534 MS2 17/20 Linfeng_081211_IgG_5.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 69.78 4.24 1.00 1 2 681.34845 1361.68962 -0.84 22.87 3810 3810 MS2 17/24 Linfeng_081211_IgG_7.raw High ISSVLAGGScR IPI:IPI00217963.3 5 1 CID C10(Carbamidomethyl) 63.35 4.24 1.00 1 2 553.78271 1106.55815 -3.77 23.41 2369 2369 MS2 19/20 Linfeng_091611_rIgG_2.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 62.49 4.23 1.00 1 2 651.33057 1301.65386 -3.50 28.73 5689 5689 MS2 17/22 Linfeng_081211_IgG_6.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 80.53 4.22 1.00 1 2 639.79498 1278.58269 -2.28 21.94 2193 2193 MS2 19/28 Linfeng_091811_SIN3A_9.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 55.78 4.20 1.00 1 2 639.79730 1278.58733 1.35 22.89 3486 3486 MS2 18/28 Linfeng_081211_IgG_9.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 61.32 4.19 1.00 1 2 651.33191 1301.65654 -1.44 27.72 5362 5362 MS2 17/22 Linfeng_081211_IgG_10.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 64.58 4.19 1.00 1 2 681.34808 1361.68889 -1.37 22.65 3874 3874 MS2 16/24 Linfeng_081211_IgG_10.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 32.70 4.19 1.00 1 2 639.79510 1278.58293 -2.09 22.01 2297 2297 MS2 18/28 Linfeng_091811_SIN3A_4.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 79.63 4.17 1.00 1 2 639.79437 1278.58147 -3.24 21.70 2028 2028 MS2 20/28 Linfeng_091811_SIN3A_7.raw High TRLEQEIATYR IPI:IPI00217963.3 14 1 CID 48.03 4.14 1.00 1 2 690.36597 1379.72466 -2.28 28.26 3027 3027 MS2 17/20 Linfeng_091611_rIgG_9.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 48.74 4.14 1.00 1 2 553.78375 1106.56023 -1.90 23.65 2529 2529 MS2 18/20 Linfeng_091811_SIN3A_4.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 121.84 4.14 1.00 1 2 713.35217 1425.69707 0.12 25.36 4819 4819 MS2 19/28 Linfeng_081211_IgG_8.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3 5 1 CID C3(Carbamidomethyl) 42.49 4.10 1.00 1 2 639.79553 1278.58379 -1.42 21.85 2283 2283 MS2 15/28 Linfeng_091611_rIgG_6.raw High EVATNSELVQSGK IPI:IPI00384444.6 7 1 CID 76.65 4.08 1.00 1 2 681.34760 1361.68791 -2.09 22.08 2212 2212 MS2 19/24 Linfeng_091811_SIN3A_9.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 65.19 4.08 1.00 1 2 651.33221 1301.65715 -0.97 28.68 5801 5801 MS2 17/22 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 53.27 4.06 1.00 1 2 639.79694 1278.58660 0.77 24.39 3037 3037 MS2 15/28 Linfeng_081211_IgG_1.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 47.31 4.05 1.00 1 2 681.34827 1361.68926 -1.11 23.54 4155 4155 MS2 18/24 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 24.43 4.03 1.00 1 2 651.33356 1301.65984 1.10 30.13 5992 5992 MS2 14/22 Linfeng_081211_IgG_5.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 93.23 4.02 1.00 1 2 713.35120 1425.69512 -1.25 29.29 3958 3958 MS2 16/28 Linfeng_081211_IgG_1.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 94.27 4.02 1.00 1 2 713.35059 1425.69390 -2.11 30.30 4171 4171 MS2 17/28 Linfeng_081211_IgG_1.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 65.92 4.01 1.00 1 2 553.78381 1106.56035 -1.78 24.03 4411 4411 MS2 17/20 Linfeng_081211_IgG_8.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 38.81 3.97 1.00 1 2 553.78339 1106.55950 -2.56 24.20 4402 4402 MS2 17/20 Linfeng_081211_IgG_6.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 57.29 3.95 1.00 1 2 639.79596 1278.58464 -0.75 22.63 3866 3866 MS2 20/28 Linfeng_081211_IgG_10.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 50.83 3.95 1.00 1 2 561.79205 1122.57683 -1.93 26.79 5244 5244 MS2 15/16 Linfeng_081211_IgG_3.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 43.30 3.94 1.00 1 2 639.79541 1278.58354 -1.61 22.82 3661 3661 MS2 22/28 Linfeng_081211_IgG_5.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 53.38 3.93 1.00 1 2 713.35175 1425.69621 -0.48 27.09 4940 4940 MS2 15/28 Linfeng_081211_IgG_2.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 87.21 3.92 1.00 1 2 713.35272 1425.69817 0.89 26.89 4881 4881 MS2 16/28 Linfeng_081211_IgG_2.raw High APSTYGGGLSVSSSR IPI:IPI00384444.6 2 1 CID 63.21 3.92 1.00 1 2 713.35400 1425.70073 2.69 25.69 4713 4713 MS2 16/28 Linfeng_081211_IgG_4.raw High cEMEQQNQEYK IPI:IPI00384444.6;IPI:IPI00450768.7 5 2 CID C1(Carbamidomethyl) 51.00 3.91 1.00 1 2 743.80023 1486.59319 -0.38 20.41 3067 3067 MS2 16/20 Linfeng_081211_IgG_3.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 51.34 3.88 1.00 1 2 690.36676 1379.72624 -1.13 28.80 5712 5712 MS2 15/20 Linfeng_081211_IgG_10.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 53.87 3.87 1.00 1 2 681.34924 1361.69121 0.33 23.51 4145 4145 MS2 19/24 Linfeng_081211_IgG_3.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 69.75 3.86 1.00 1 2 651.33069 1301.65410 -3.31 29.71 4787 4787 MS2 16/22 Linfeng_081211_IgG_9.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 22.31 3.86 1.00 1 2 639.79596 1278.58464 -0.75 27.26 3602 3602 MS2 17/28 Linfeng_081211_IgG_1.raw High ALEEANADLEVK IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6 19 3 CID 36.86 3.86 1.00 1 2 651.33319 1301.65911 0.53 31.52 4413 4413 MS2 16/22 Linfeng_081211_IgG_1.raw High TRLEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7 14 4 CID 41.49 3.86 1.00 1 2 690.36737 1379.72746 -0.24 30.27 6201 6201 MS2 11/20 Linfeng_081211_IgG_6.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 44.46 3.76 1.00 1 2 515.30029 1029.59331 -0.61 34.85 7148 7148 MS2 15/16 Linfeng_081211_IgG_2.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.79 3.72 1.00 1 2 515.30084 1029.59441 0.45 34.50 7954 7954 MS2 15/16 Linfeng_081211_IgG_3.raw High ILTATVDNANVLLQIDNAR IPI:IPI00384444.6 5 1 CID 56.30 3.70 1.00 1 2 1027.56714 2054.12700 1.39 40.75 9485 9485 MS2 17/36 Linfeng_081211_IgG_4.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 44.18 3.70 1.00 1 2 610.79968 1220.59209 -1.60 29.94 6242 6242 MS2 17/20 Linfeng_081211_IgG_8.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 58.85 3.66 1.00 1 2 586.76605 1172.52483 -0.93 40.72 9417 9417 MS2 13/16 Linfeng_081211_IgG_5.raw High ISSVLAGGScR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C10(Carbamidomethyl) 68.16 3.66 1.00 1 2 553.78394 1106.56059 -1.56 25.29 4747 4747 MS2 18/20 Linfeng_081211_IgG_3.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 48.65 3.66 1.00 1 2 515.30029 1029.59331 -0.61 33.71 7363 7363 MS2 15/16 Linfeng_081211_IgG_7.raw High cEMEQQNQEYK IPI:IPI00384444.6;IPI:IPI00450768.7 5 2 CID C1(Carbamidomethyl) 56.56 3.66 1.00 1 2 743.79999 1486.59270 -0.71 20.71 2938 2938 MS2 16/20 Linfeng_081211_IgG_2.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 57.80 3.65 1.00 1 2 586.76624 1172.52519 -0.62 40.82 9661 9661 MS2 13/16 Linfeng_081211_IgG_6.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 47.85 3.63 1.00 1 2 586.76624 1172.52519 -0.62 40.59 9744 9744 MS2 13/16 Linfeng_081211_IgG_8.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 40.56 3.62 1.00 1 2 586.76740 1172.52751 1.36 41.35 10310 10310 MS2 13/16 Linfeng_081211_IgG_3.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 40.97 3.62 1.00 1 2 586.76672 1172.52617 0.21 40.84 9767 9767 MS2 13/16 Linfeng_081211_IgG_7.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 43.56 3.61 1.00 1 2 515.30023 1029.59319 -0.73 42.53 6934 6934 MS2 15/16 Linfeng_081211_IgG_1.raw High GScGIGGGIGGGSSR IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID C3(Carbamidomethyl) 65.86 3.61 1.00 1 2 639.79614 1278.58501 -0.47 22.69 3740 3740 MS2 17/28 Linfeng_081211_IgG_4.raw High ASLENSLEETK IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID 70.90 3.61 1.00 1 2 610.80280 1220.59831 -1.82 26.79 5218 5218 MS2 15/20 Linfeng_081211_IgG_8.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 52.13 3.60 1.00 1 2 561.79163 1122.57598 -2.70 31.59 4423 4423 MS2 15/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 37.34 3.57 1.00 1 2 515.29987 1029.59245 -1.44 33.17 7385 7385 MS2 15/16 Linfeng_081211_IgG_8.raw High EVATNSELVQSGK IPI:IPI00384444.6;IPI:IPI00450768.7 7 2 CID 66.85 3.57 1.00 1 2 681.34985 1361.69243 1.23 22.78 3456 3456 MS2 13/24 Linfeng_081211_IgG_9.raw High DAEEWFFTK IPI:IPI00384444.6;IPI:IPI00791156.1 4 2 CID 52.16 3.55 1.00 1 2 586.76685 1172.52641 0.42 46.86 8230 8230 MS2 13/16 Linfeng_081211_IgG_1.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 42.21 3.55 1.00 1 2 515.30115 1029.59502 1.05 36.35 6128 6128 MS2 15/16 Linfeng_081211_IgG_9.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 56.04 3.53 1.00 1 2 561.79254 1122.57781 -1.06 25.49 4862 4862 MS2 15/16 Linfeng_081211_IgG_8.raw High ASLENSLEETK IPI:IPI00217963.3;IPI:IPI00384444.6 5 2 CID 79.94 3.53 1.00 1 2 610.80176 1220.59624 -3.52 28.35 5275 5275 MS2 15/20 Linfeng_081211_IgG_2.raw High VTmQNLNDR IPI:IPI00009865.4;IPI:IPI00217963.3;IPI:IPI00328103.4;IPI:IPI00384444.6 9 4 CID M3(Oxidation) 45.48 3.50 1.00 1 2 553.76672 1106.52617 0.21 18.27 1719 1719 MS2 15/16 Linfeng_081211_IgG_1.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 39.51 3.48 1.00 1 2 610.79926 1220.59123 -2.30 30.46 6204 6204 MS2 14/20 Linfeng_081211_IgG_7.raw High LEQEIATYR IPI:IPI00171196.2;IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3 19 5 CID 38.64 3.48 1.00 1 2 561.79089 1122.57451 -4.00 25.80 4846 4846 MS2 15/16 Linfeng_081211_IgG_10.raw High VLDELTLAR IPI:IPI00217963.3;IPI:IPI00384444.6;IPI:IPI00450768.7;IPI:IPI00789324.3;IPI:IPI00791156.1 21 5 CID 47.59 3.47 1.00 1 2 515.29950 1029.59172 -2.16 33.58 7207 7207 MS2 15/16 Linfeng_081211_IgG_5.raw High mSVEADINGLR IPI:IPI00384444.6;IPI:IPI00789324.3 7 2 CID M1(Oxidation) 13.93 3.46 1.00 1 2 610.80023 1220.59319 -0.70 38.66 5833 5833 MS2 17/20 Linfeng_081211_IgG_1.raw IPI:IPI00019359.4 623 62.0 5.24 "Keratin, type I cytoskeletal 9" 59.39 506 25 2234.77 53.61 201 22 1686.74 49.28 156 19 1553.50 55.38 149 21 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 156.54 10.78 1.00 1 3 1075.09705 3223.27658 -1.60 38.04 5655 5655 MS2 43/156 Linfeng_081211_IgG_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 151.76 10.67 1.00 1 3 1075.09058 3223.25718 -7.62 22.39 2124 2124 MS2 39/156 Linfeng_091811_SIN3A_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 151.76 10.55 1.00 1 3 1075.09204 3223.26157 -6.26 22.55 2374 2374 MS2 43/156 Linfeng_091811_SIN3A_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 144.49 10.50 1.00 1 3 1075.09131 3223.25937 -6.94 22.41 2206 2206 MS2 41/156 Linfeng_091811_SIN3A_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 156.54 10.27 1.00 1 3 1075.09204 3223.26157 -6.26 22.42 2236 2236 MS2 44/156 Linfeng_091611_rIgG_9.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 232.52 10.10 1.00 1 3 1075.09375 3223.26670 -4.67 22.23 2282 2282 MS2 45/156 Linfeng_091611_rIgG_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 247.26 10.09 1.00 1 3 1075.08997 3223.25534 -8.19 22.35 2407 2407 MS2 46/156 Linfeng_091611_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 241.27 9.55 1.00 1 3 1075.09106 3223.25864 -7.17 22.24 2304 2304 MS2 44/156 Linfeng_091811_SIN3A_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 300.00 9.52 1.00 1 3 1075.09949 3223.28391 0.67 22.18 2003 2003 MS2 40/156 Linfeng_091611_rIgG_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 154.77 9.50 1.00 1 3 1075.09656 3223.27512 -2.06 22.96 3702 3702 MS2 44/156 Linfeng_081211_IgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 144.23 9.44 1.00 1 3 1075.09717 3223.27695 -1.49 39.16 5955 5955 MS2 43/156 Linfeng_081211_IgG_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 236.55 9.39 1.00 1 3 1075.09338 3223.26560 -5.01 22.63 2313 2313 MS2 43/156 Linfeng_091811_SIN3A_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 247.46 9.24 1.00 1 3 1075.09485 3223.26999 -3.65 22.30 2346 2346 MS2 44/156 Linfeng_091611_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 200.78 9.21 1.00 1 3 1075.09729 3223.27732 -1.38 23.92 4297 4297 MS2 42/156 Linfeng_081211_IgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 9.17 1.00 1 3 1088.84180 3264.51084 -0.96 43.00 5013 5013 MS2 34/112 Linfeng_091611_rIgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 9.13 1.00 1 3 1088.84119 3264.50901 -1.52 43.13 4705 4705 MS2 35/112 Linfeng_091611_rIgG_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 146.54 9.08 1.00 1 3 1075.09448 3223.26889 -3.99 22.41 2324 2324 MS2 43/156 Linfeng_091811_SIN3A_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 9.01 1.00 1 3 1088.83984 3264.50498 -2.75 43.03 5157 5157 MS2 36/112 Linfeng_091611_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 139.38 8.98 1.00 1 3 1088.84009 3264.50571 -2.53 43.18 5056 5056 MS2 33/112 Linfeng_091811_SIN3A_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 123.73 8.93 1.00 1 3 902.38684 2705.14597 -5.65 37.55 4152 4152 MS2 39/124 Linfeng_091811_SIN3A_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 138.12 8.92 1.00 1 3 1088.84534 3264.52146 2.29 42.91 10425 10425 MS2 34/112 Linfeng_081211_IgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.87 1.00 1 3 1088.83838 3264.50058 -4.10 43.45 5303 5303 MS2 33/112 Linfeng_091811_SIN3A_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 146.54 8.85 1.00 1 3 902.39075 2705.15769 -1.32 37.31 8388 8388 MS2 45/124 Linfeng_081211_IgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 153.53 8.82 1.00 1 3 1075.09778 3223.27878 -0.92 22.56 3940 3940 MS2 41/156 Linfeng_081211_IgG_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 202.92 8.80 1.00 1 3 1075.09729 3223.27732 -1.38 22.03 1825 1825 MS2 42/156 Linfeng_091611_rIgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 142.39 8.78 1.00 1 3 1088.84106 3264.50864 -1.63 43.25 5126 5126 MS2 33/112 Linfeng_091611_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 142.39 8.78 1.00 1 3 902.38605 2705.14359 -6.53 37.18 4398 4398 MS2 39/124 Linfeng_091611_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.73 1.00 1 3 1088.83948 3264.50388 -3.09 42.93 4518 4518 MS2 34/112 Linfeng_091611_rIgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.69 1.00 1 3 1088.84106 3264.50864 -1.63 43.33 4917 4917 MS2 36/112 Linfeng_091811_SIN3A_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 140.46 8.64 1.00 1 3 902.38550 2705.14194 -7.14 37.56 4178 4178 MS2 37/124 Linfeng_091811_SIN3A_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 144.77 8.61 1.00 1 3 902.38647 2705.14487 -6.06 37.62 4380 4380 MS2 41/124 Linfeng_091811_SIN3A_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 131.59 8.60 1.00 1 3 902.38666 2705.14542 -5.85 37.50 4323 4323 MS2 41/124 Linfeng_091811_SIN3A_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 140.36 8.53 1.00 1 3 1088.84119 3264.50901 -1.52 42.96 4930 4930 MS2 36/112 Linfeng_091611_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.52 1.00 1 3 1088.83801 3264.49948 -4.44 43.04 4966 4966 MS2 34/112 Linfeng_091611_rIgG_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 138.68 8.40 1.00 1 3 1088.84021 3264.50608 -2.42 42.98 4921 4921 MS2 34/112 Linfeng_091611_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.34 1.00 1 3 1088.84302 3264.51450 0.16 43.66 10555 10555 MS2 31/112 Linfeng_081211_IgG_8.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 125.96 8.32 1.00 1 3 837.38135 2510.12949 -0.95 34.71 7937 7937 MS2 39/88 Linfeng_081211_IgG_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.26 1.00 1 3 1088.84131 3264.50937 -1.41 42.59 9902 9902 MS2 29/112 Linfeng_081211_IgG_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 145.07 8.25 1.00 1 3 1088.83997 3264.50534 -2.64 43.44 5125 5125 MS2 34/112 Linfeng_091811_SIN3A_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 128.47 8.25 1.00 1 3 902.39063 2705.15732 -1.45 37.13 8681 8681 MS2 35/124 Linfeng_081211_IgG_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 142.39 8.25 1.00 1 3 1088.84521 3264.52109 2.18 43.81 11145 11145 MS2 35/112 Linfeng_081211_IgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 133.50 8.24 1.00 1 3 902.38739 2705.14762 -5.04 37.29 4205 4205 MS2 40/124 Linfeng_091611_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.23 1.00 1 3 1088.84155 3264.51010 -1.18 43.28 5126 5126 MS2 32/112 Linfeng_091811_SIN3A_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 152.56 8.23 1.00 1 3 1075.09851 3223.28098 -0.24 23.13 3891 3891 MS2 38/156 Linfeng_081211_IgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 122.28 8.23 1.00 1 3 902.39191 2705.16117 -0.03 43.25 7135 7135 MS2 41/124 Linfeng_081211_IgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 144.11 8.23 1.00 1 3 902.38629 2705.14432 -6.26 37.27 4190 4190 MS2 38/124 Linfeng_091611_rIgG_9.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 77.70 8.19 1.00 1 3 837.38269 2510.13352 0.66 37.05 8862 8862 MS2 37/88 Linfeng_081211_IgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 139.09 8.19 1.00 1 3 1088.84082 3264.50791 -1.86 43.14 5081 5081 MS2 35/112 Linfeng_091811_SIN3A_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 300.00 8.17 1.00 1 3 1088.84143 3264.50974 -1.30 43.19 5092 5092 MS2 34/112 Linfeng_091811_SIN3A_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 132.23 8.16 1.00 1 3 1088.84583 3264.52292 2.74 43.75 10550 10550 MS2 31/112 Linfeng_081211_IgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 147.50 8.15 1.00 1 3 902.38788 2705.14908 -4.50 37.46 4510 4510 MS2 42/124 Linfeng_091811_SIN3A_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 112.87 8.15 1.00 1 3 1075.09900 3223.28244 0.21 22.89 3813 3813 MS2 40/156 Linfeng_081211_IgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 137.29 8.13 1.00 1 3 902.38739 2705.14762 -5.04 37.65 4400 4400 MS2 42/124 Linfeng_091811_SIN3A_4.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 144.11 8.13 1.00 1 3 656.02338 1966.05558 -2.48 36.59 4204 4204 MS2 34/64 Linfeng_091811_SIN3A_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 154.77 8.10 1.00 1 3 1075.09705 3223.27658 -1.60 22.80 3922 3922 MS2 42/156 Linfeng_081211_IgG_10.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 102.22 8.08 1.00 1 3 697.96503 2091.88053 -0.91 15.93 1438 1438 MS2 39/100 Linfeng_091811_SIN3A_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 155.53 8.04 1.00 1 3 902.38739 2705.14762 -5.04 37.41 4349 4349 MS2 43/124 Linfeng_091811_SIN3A_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 122.63 8.03 1.00 1 3 902.38806 2705.14963 -4.30 37.37 4223 4223 MS2 37/124 Linfeng_091611_rIgG_1.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 134.72 8.00 1.00 1 3 918.44720 2753.32706 1.33 52.87 6074 6074 MS2 32/88 Linfeng_091811_SIN3A_10.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 120.61 7.98 1.00 1 3 837.37994 2510.12528 -2.63 34.79 3966 3966 MS2 36/88 Linfeng_091811_SIN3A_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 131.80 7.94 1.00 1 3 902.38696 2705.14634 -5.51 37.17 3783 3783 MS2 41/124 Linfeng_091611_rIgG_3.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 300.00 7.92 1.00 1 3 656.02332 1966.05539 -2.58 36.42 3852 3852 MS2 37/64 Linfeng_091611_rIgG_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 145.74 7.89 1.00 1 3 902.38745 2705.14780 -4.97 37.26 4278 4278 MS2 39/124 Linfeng_091611_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 126.35 7.89 1.00 1 3 837.37946 2510.12381 -3.21 34.88 3805 3805 MS2 35/88 Linfeng_091811_SIN3A_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 140.91 7.88 1.00 1 3 902.39124 2705.15915 -0.78 38.23 9269 9269 MS2 43/124 Linfeng_081211_IgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 147.24 7.86 1.00 1 3 902.38879 2705.15183 -3.48 37.37 4378 4378 MS2 42/124 Linfeng_091611_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 89.52 7.85 1.00 1 3 902.39221 2705.16208 0.31 37.35 8411 8411 MS2 36/124 Linfeng_081211_IgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 122.54 7.73 1.00 1 4 689.08557 2753.32046 -1.07 52.31 6126 6126 MS2 46/132 Linfeng_091611_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 116.92 7.72 1.00 1 3 902.39087 2705.15805 -1.18 37.48 8633 8633 MS2 39/124 Linfeng_081211_IgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 135.38 7.65 1.00 1 3 1088.83972 3264.50461 -2.87 43.08 5246 5246 MS2 31/112 Linfeng_091611_rIgG_8.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 130.87 7.63 1.00 1 3 837.38147 2510.12986 -0.80 35.03 7853 7853 MS2 35/88 Linfeng_081211_IgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 180.27 7.57 1.00 1 3 902.38654 2705.14505 -5.99 37.35 4333 4333 MS2 41/124 Linfeng_091811_SIN3A_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 135.25 7.55 1.00 1 3 837.38177 2510.13077 -0.44 34.88 7653 7653 MS2 37/88 Linfeng_081211_IgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 141.42 7.55 1.00 1 3 918.44586 2753.32303 -0.13 52.27 6121 6121 MS2 38/88 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 143.53 7.51 1.00 1 3 597.91321 1791.72507 -1.52 17.35 1534 1534 MS2 38/88 Linfeng_091611_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 66.62 7.50 1.00 1 3 902.38818 2705.15000 -4.16 37.53 4388 4388 MS2 34/124 Linfeng_091611_rIgG_6.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 135.38 7.48 1.00 1 3 918.44739 2753.32761 1.53 52.63 6255 6255 MS2 36/88 Linfeng_091811_SIN3A_1.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 142.39 7.45 1.00 1 4 916.44165 3662.74477 -2.24 37.68 4011 4011 MS2 47/186 Linfeng_091611_rIgG_10.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 300.00 7.45 1.00 1 3 918.44647 2753.32486 0.53 52.66 6249 6249 MS2 38/88 Linfeng_091811_SIN3A_3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 82.65 7.45 1.00 1 3 697.96478 2091.87979 -1.26 15.66 1540 1540 MS2 34/100 Linfeng_091611_rIgG_8.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 139.38 7.45 1.00 1 3 656.02325 1966.05521 -2.67 36.36 4162 4162 MS2 37/64 Linfeng_091611_rIgG_7.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 119.36 7.41 1.00 1 4 689.08490 2753.31777 -2.05 52.30 5685 5685 MS2 46/132 Linfeng_091611_rIgG_3.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 300.00 7.40 1.00 1 3 656.02307 1966.05466 -2.95 36.70 4277 4277 MS2 36/64 Linfeng_091811_SIN3A_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 90.30 7.40 1.00 1 4 816.88220 3264.50698 -2.14 43.03 5158 5158 MS2 40/168 Linfeng_091611_rIgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 300.00 7.40 1.00 1 3 918.44543 2753.32175 -0.60 52.28 6089 6089 MS2 33/88 Linfeng_091611_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 101.61 7.34 1.00 1 3 837.38055 2510.12711 -1.90 36.77 8408 8408 MS2 36/88 Linfeng_081211_IgG_6.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 132.38 7.34 1.00 1 3 918.44788 2753.32907 2.06 52.63 6239 6239 MS2 39/88 Linfeng_091811_SIN3A_2.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 300.00 7.33 1.00 1 3 656.02313 1966.05484 -2.86 36.41 4078 4078 MS2 34/64 Linfeng_091611_rIgG_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 154.77 7.33 1.00 1 3 902.39087 2705.15805 -1.18 37.14 8420 8420 MS2 43/124 Linfeng_081211_IgG_10.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 115.73 7.31 1.00 1 4 689.08710 2753.32656 1.15 52.64 6240 6240 MS2 43/132 Linfeng_091811_SIN3A_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 132.20 7.31 1.00 1 3 918.44812 2753.32981 2.33 52.97 6065 6065 MS2 36/88 Linfeng_091811_SIN3A_7.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 62.23 7.30 1.00 1 3 793.06171 2377.17057 -7.44 37.38 4294 4294 MS2 33/80 Linfeng_091611_rIgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 101.05 7.22 1.00 1 4 816.88251 3264.50820 -1.77 43.28 5069 5069 MS2 38/168 Linfeng_091811_SIN3A_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 135.76 7.22 1.00 1 3 918.44690 2753.32614 1.00 52.74 6477 6477 MS2 35/88 Linfeng_091811_SIN3A_5.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 103.18 7.19 1.00 1 4 689.08612 2753.32265 -0.27 52.41 6281 6281 MS2 43/132 Linfeng_091611_rIgG_5.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 83.28 7.18 1.00 1 3 697.96509 2091.88071 -0.82 15.77 1438 1438 MS2 36/100 Linfeng_091611_rIgG_6.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 137.73 7.18 1.00 1 3 918.44629 2753.32431 0.33 52.73 6191 6191 MS2 38/88 Linfeng_091811_SIN3A_4.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 144.11 7.15 1.00 1 3 656.02271 1966.05356 -3.51 36.30 4367 4367 MS2 34/64 Linfeng_091611_rIgG_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 137.14 7.14 1.00 1 3 1088.83911 3264.50278 -3.43 43.53 4980 4980 MS2 31/112 Linfeng_091811_SIN3A_8.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 136.00 7.14 1.00 1 3 656.02203 1966.05155 -4.53 36.39 4209 4209 MS2 37/64 Linfeng_091811_SIN3A_1.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 133.62 7.10 1.00 1 4 689.08661 2753.32461 0.44 52.67 6250 6250 MS2 45/132 Linfeng_091811_SIN3A_3.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 139.17 7.07 1.00 1 3 656.02295 1966.05429 -3.14 36.40 4092 4092 MS2 33/64 Linfeng_091611_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 76.96 7.01 1.00 1 3 597.91467 1791.72947 0.93 18.31 2399 2399 MS2 37/88 Linfeng_081211_IgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 118.69 6.99 1.00 1 3 597.91223 1791.72214 -3.16 17.75 1696 1696 MS2 39/88 Linfeng_091811_SIN3A_4.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 137.61 6.99 1.00 1 2 919.48523 1837.96318 -1.26 38.85 8862 8862 MS2 24/30 Linfeng_081211_IgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 123.70 6.99 1.00 1 3 597.91199 1791.72141 -3.57 17.77 1807 1807 MS2 38/88 Linfeng_091811_SIN3A_5.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 105.07 6.97 1.00 1 3 837.38208 2510.13169 -0.07 34.77 7627 7627 MS2 37/88 Linfeng_081211_IgG_5.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 113.90 6.96 1.00 1 3 656.02496 1966.06034 -0.06 36.55 8141 8141 MS2 29/64 Linfeng_081211_IgG_5.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 109.70 6.93 1.00 1 4 689.08582 2753.32143 -0.71 52.31 6312 6312 MS2 43/132 Linfeng_091611_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 112.85 6.92 1.00 1 3 1075.09802 3223.27951 -0.69 22.71 3948 3948 MS2 37/156 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 153.82 6.90 1.00 1 3 597.91339 1791.72562 -1.22 17.48 1544 1544 MS2 41/88 Linfeng_091611_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 84.79 6.88 1.00 1 4 816.88348 3264.51211 -0.57 42.97 4931 4931 MS2 37/168 Linfeng_091611_rIgG_2.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 95.07 6.88 1.00 1 3 735.00873 2203.01163 -1.34 47.02 5657 5657 MS2 33/68 Linfeng_091611_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 116.19 6.87 1.00 1 3 902.39325 2705.16520 1.46 37.68 8710 8710 MS2 35/124 Linfeng_081211_IgG_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 86.62 6.86 1.00 1 4 816.88202 3264.50625 -2.37 43.39 4900 4900 MS2 38/168 Linfeng_091811_SIN3A_7.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 62.23 6.86 1.00 1 3 697.96454 2091.87906 -1.61 16.95 1973 1973 MS2 32/100 Linfeng_081211_IgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 123.19 6.85 1.00 1 3 597.91467 1791.72947 0.93 19.25 1911 1911 MS2 41/88 Linfeng_081211_IgG_1.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 93.97 6.85 1.00 1 3 735.00891 2203.01218 -1.09 46.99 5435 5435 MS2 35/68 Linfeng_091611_rIgG_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 135.76 6.82 1.00 1 3 918.44647 2753.32486 0.53 52.28 6309 6309 MS2 36/88 Linfeng_091611_rIgG_4.raw High YcGQLQMIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID C2(Carbamidomethyl) 121.15 6.76 1.00 1 3 913.11652 2737.33500 2.38 54.32 6364 6364 MS2 38/88 Linfeng_091611_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 159.55 6.76 1.00 1 2 1353.08545 2705.16362 0.88 37.38 8424 8424 MS2 23/62 Linfeng_081211_IgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 70.68 6.73 1.00 1 4 816.88116 3264.50283 -3.41 43.05 4968 4968 MS2 39/168 Linfeng_091611_rIgG_1.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 58.97 6.72 1.00 1 3 793.06683 2377.18595 -0.97 37.55 8802 8802 MS2 29/80 Linfeng_081211_IgG_8.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 111.34 6.71 1.00 1 3 735.00793 2203.00925 -2.42 47.46 5597 5597 MS2 32/68 Linfeng_091811_SIN3A_2.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 127.13 6.70 1.00 1 3 793.06122 2377.16910 -8.06 37.51 4325 4325 MS2 34/80 Linfeng_091811_SIN3A_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 72.52 6.70 1.00 1 4 816.88373 3264.51308 -0.27 43.70 10567 10567 MS2 39/168 Linfeng_081211_IgG_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 94.31 6.69 1.00 1 4 816.88580 3264.52138 2.27 48.74 8718 8718 MS2 34/168 Linfeng_081211_IgG_1.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 87.79 6.69 1.00 1 3 735.00854 2203.01108 -1.59 47.27 5602 5602 MS2 31/68 Linfeng_091811_SIN3A_1.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 62.76 6.69 1.00 1 3 793.06879 2377.19181 1.49 37.42 8437 8437 MS2 27/80 Linfeng_081211_IgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 122.54 6.67 1.00 1 3 918.44653 2753.32505 0.60 52.34 6159 6159 MS2 33/88 Linfeng_091611_rIgG_7.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 126.73 6.67 1.00 1 3 918.44672 2753.32560 0.80 52.46 5862 5862 MS2 32/88 Linfeng_091611_rIgG_10.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 117.32 6.65 1.00 1 3 597.91254 1791.72306 -2.65 17.37 1622 1622 MS2 40/88 Linfeng_091811_SIN3A_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 148.75 6.64 1.00 1 2 1353.07556 2705.14385 -6.43 37.27 4210 4210 MS2 25/62 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 135.43 6.63 1.00 1 2 896.36835 1791.72942 0.90 22.00 2489 2489 MS2 23/44 Linfeng_081211_IgG_1.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 58.07 6.62 1.00 1 3 697.96429 2091.87833 -1.96 15.62 1378 1378 MS2 33/100 Linfeng_091811_SIN3A_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 131.39 6.61 1.00 1 3 597.91260 1791.72324 -2.55 17.38 1710 1710 MS2 40/88 Linfeng_091611_rIgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 93.20 6.52 1.00 1 4 689.08508 2753.31850 -1.78 52.87 6491 6491 MS2 41/132 Linfeng_091811_SIN3A_5.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 107.49 6.52 1.00 1 3 735.00800 2203.00943 -2.34 47.22 5539 5539 MS2 34/68 Linfeng_091611_rIgG_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 139.63 6.51 1.00 1 4 806.57428 3223.27529 -2.00 22.23 2208 2208 MS2 45/234 Linfeng_091611_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 146.32 6.49 1.00 1 2 896.36841 1791.72954 0.97 19.58 2591 2591 MS2 23/44 Linfeng_081211_IgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 153.53 6.49 1.00 1 2 896.36639 1791.72551 -1.28 17.25 1508 1508 MS2 16/44 Linfeng_091611_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 144.11 6.47 1.00 1 2 896.36597 1791.72466 -1.75 17.28 1609 1609 MS2 23/44 Linfeng_091811_SIN3A_1.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 81.33 6.47 1.00 1 3 793.06580 2377.18283 -2.28 37.14 8422 8422 MS2 33/80 Linfeng_081211_IgG_10.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 91.55 6.47 1.00 1 3 735.00739 2203.00760 -3.17 47.62 5446 5446 MS2 33/68 Linfeng_091811_SIN3A_10.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 71.95 6.45 1.00 1 3 793.06628 2377.18430 -1.67 37.25 8371 8371 MS2 28/80 Linfeng_081211_IgG_5.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 101.44 6.45 1.00 1 3 735.00897 2203.01236 -1.01 47.34 5615 5615 MS2 34/68 Linfeng_091811_SIN3A_3.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 125.84 6.45 1.00 1 2 896.36407 1791.72087 -3.87 2.04 296 296 MS2 22/44 Linfeng_091811_SIN3A_8.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 172.27 6.44 1.00 1 2 896.36627 1791.72527 -1.41 17.04 1544 1544 MS2 22/44 Linfeng_091811_SIN3A_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 127.61 6.44 1.00 1 3 918.44672 2753.32560 0.80 52.48 6071 6071 MS2 35/88 Linfeng_091611_rIgG_9.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 96.99 6.43 1.00 1 3 735.01068 2203.01749 1.32 47.31 11445 11445 MS2 31/68 Linfeng_081211_IgG_8.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 73.33 6.41 1.00 1 3 793.06213 2377.17185 -6.90 37.51 4354 4354 MS2 30/80 Linfeng_091811_SIN3A_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 89.04 6.40 1.00 1 3 837.38281 2510.13388 0.80 46.24 8052 8052 MS2 30/88 Linfeng_081211_IgG_1.raw High SDLEmQYETLQEELMALK IPI:IPI00019359.4 1 1 CID M5(Oxidation) 72.02 6.40 1.00 1 3 729.67688 2187.01609 -1.64 48.79 5877 5877 MS2 31/68 Linfeng_091611_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 82.52 6.40 1.00 1 4 816.88287 3264.50966 -1.32 43.35 4919 4919 MS2 35/168 Linfeng_091811_SIN3A_10.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 52.73 6.39 1.00 1 3 699.01672 2095.03562 -0.98 40.55 9731 9731 MS2 23/64 Linfeng_081211_IgG_8.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 141.09 6.39 1.00 1 3 837.38074 2510.12766 -1.68 34.52 7611 7611 MS2 35/88 Linfeng_081211_IgG_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 300.00 6.37 1.00 1 2 1353.08240 2705.15752 -1.38 43.21 7124 7124 MS2 22/62 Linfeng_081211_IgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 129.02 6.37 1.00 1 3 597.91327 1791.72525 -1.42 17.53 1637 1637 MS2 39/88 Linfeng_091811_SIN3A_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 82.30 6.37 1.00 1 4 816.88336 3264.51162 -0.72 43.31 5130 5130 MS2 40/168 Linfeng_091811_SIN3A_4.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 115.32 6.36 1.00 1 3 597.91235 1791.72251 -2.95 17.06 1546 1546 MS2 37/88 Linfeng_091811_SIN3A_2.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 102.88 6.36 1.00 1 2 1255.56775 2510.12822 -1.45 35.14 7894 7894 MS2 22/44 Linfeng_081211_IgG_7.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 151.09 6.35 1.00 1 3 918.44891 2753.33219 3.19 51.74 12144 12144 MS2 32/88 Linfeng_081211_IgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 96.68 6.35 1.00 1 2 793.88440 1586.76152 -2.65 28.85 5380 5380 MS2 23/26 Linfeng_081211_IgG_2.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 95.01 6.35 1.00 1 3 735.00769 2203.00852 -2.75 47.03 5474 5474 MS2 38/68 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 98.76 6.34 1.00 1 3 597.91321 1791.72507 -1.52 17.30 1515 1515 MS2 37/88 Linfeng_091611_rIgG_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 82.86 6.34 1.00 1 3 918.44580 2753.32285 -0.20 52.36 6250 6250 MS2 28/88 Linfeng_091611_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 158.21 6.32 1.00 1 2 1353.08411 2705.16094 -0.12 37.54 8655 8655 MS2 24/62 Linfeng_081211_IgG_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 77.11 6.29 1.00 1 2 793.88470 1586.76213 -2.27 27.60 5319 5319 MS2 23/26 Linfeng_081211_IgG_6.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 87.80 6.28 1.00 1 2 793.88135 1586.75542 -6.50 26.94 3046 3046 MS2 23/26 Linfeng_091611_rIgG_4.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 88.82 6.27 1.00 1 3 699.01520 2095.03104 -3.16 40.69 4660 4660 MS2 30/64 Linfeng_091611_rIgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 92.29 6.27 1.00 1 2 793.88544 1586.76360 -1.34 33.62 4810 4810 MS2 23/26 Linfeng_081211_IgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 79.68 6.26 1.00 1 2 793.88062 1586.75395 -7.42 27.29 2798 2798 MS2 23/26 Linfeng_091811_SIN3A_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 74.95 6.25 1.00 1 3 1088.84448 3264.51889 1.51 42.43 10195 10195 MS2 30/112 Linfeng_081211_IgG_10.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 109.98 6.25 1.00 1 3 597.91498 1791.73038 1.44 18.20 2551 2551 MS2 38/88 Linfeng_081211_IgG_8.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 93.60 6.25 1.00 1 3 735.00739 2203.00760 -3.17 47.04 5036 5036 MS2 37/68 Linfeng_091611_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 197.09 6.24 1.00 1 2 896.36505 1791.72283 -2.78 17.47 1799 1799 MS2 19/44 Linfeng_091611_rIgG_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 85.71 6.24 1.00 1 2 793.88464 1586.76201 -2.34 29.60 4771 4771 MS2 23/26 Linfeng_081211_IgG_9.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 117.56 6.22 1.00 1 4 689.08649 2753.32412 0.26 52.64 6256 6256 MS2 42/132 Linfeng_091811_SIN3A_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 135.87 6.21 1.00 1 4 816.88629 3264.52334 2.87 43.83 11154 11154 MS2 39/168 Linfeng_081211_IgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 96.71 6.19 1.00 1 3 1088.84619 3264.52402 3.08 42.64 9984 9984 MS2 26/112 Linfeng_081211_IgG_4.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 90.30 6.18 1.00 1 3 735.00891 2203.01218 -1.09 47.10 5440 5440 MS2 38/68 Linfeng_091611_rIgG_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 90.23 6.17 1.00 1 2 793.88171 1586.75615 -6.04 26.98 2859 2859 MS2 23/26 Linfeng_091611_rIgG_1.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 115.67 6.16 1.00 1 2 1377.16431 2753.32134 -0.75 52.35 6131 6131 MS2 22/44 Linfeng_091611_rIgG_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 116.81 6.15 1.00 1 2 1255.56409 2510.12090 -4.37 34.70 3986 3986 MS2 23/44 Linfeng_091811_SIN3A_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 85.82 6.14 1.00 1 2 793.88312 1586.75896 -4.27 27.88 5325 5325 MS2 22/26 Linfeng_081211_IgG_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.72 6.13 1.00 1 2 793.88531 1586.76335 -1.50 32.60 4637 4637 MS2 23/26 Linfeng_081211_IgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 129.70 6.12 1.00 1 2 896.36670 1791.72612 -0.94 17.45 1539 1539 MS2 18/44 Linfeng_091611_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 97.83 6.11 1.00 1 3 597.91156 1791.72013 -4.28 1.91 280 280 MS2 35/88 Linfeng_091811_SIN3A_10.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 86.42 6.10 1.00 1 2 793.88098 1586.75469 -6.96 27.45 2941 2941 MS2 23/26 Linfeng_091811_SIN3A_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 75.89 6.10 1.00 1 3 529.59070 1586.75754 -5.16 27.26 2958 2958 MS2 28/52 Linfeng_091811_SIN3A_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 121.10 6.09 1.00 1 3 918.44678 2753.32578 0.86 53.59 6283 6283 MS2 29/88 Linfeng_091611_rIgG_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 88.61 6.09 1.00 1 3 837.38336 2510.13553 1.46 37.16 7794 7794 MS2 30/88 Linfeng_081211_IgG_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 79.18 6.08 1.00 1 2 793.88391 1586.76055 -3.27 27.29 3033 3033 MS2 23/26 Linfeng_091611_rIgG_6.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 77.09 6.08 1.00 1 2 793.88263 1586.75798 -4.88 27.09 3146 3146 MS2 23/26 Linfeng_091611_rIgG_8.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 76.22 6.08 1.00 1 3 699.01520 2095.03104 -3.16 40.90 4796 4796 MS2 30/64 Linfeng_091811_SIN3A_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 133.39 6.07 1.00 1 3 968.14001 2902.40549 -1.76 47.91 5768 5768 MS2 28/96 Linfeng_091611_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 103.71 6.06 1.00 1 3 1088.84277 3264.51377 -0.06 48.67 8700 8700 MS2 25/112 Linfeng_081211_IgG_1.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 68.84 6.06 1.00 1 3 699.01569 2095.03250 -2.46 40.86 4795 4795 MS2 30/64 Linfeng_091811_SIN3A_3.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 80.63 6.05 1.00 1 3 699.01465 2095.02939 -3.95 40.66 4229 4229 MS2 31/64 Linfeng_091611_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 168.84 6.05 1.00 1 2 1353.07593 2705.14458 -6.16 37.25 4408 4408 MS2 24/62 Linfeng_091611_rIgG_4.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 62.29 6.05 1.00 1 3 699.01538 2095.03159 -2.90 41.02 4832 4832 MS2 28/64 Linfeng_091811_SIN3A_4.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 96.21 6.05 1.00 1 2 1048.01953 2095.03179 -2.81 40.94 4800 4800 MS2 23/32 Linfeng_091811_SIN3A_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 126.60 6.05 1.00 1 2 896.36646 1791.72563 -1.21 17.77 1694 1694 MS2 22/44 Linfeng_091811_SIN3A_6.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 86.04 6.03 1.00 1 3 735.00940 2203.01364 -0.43 46.78 11023 11023 MS2 30/68 Linfeng_081211_IgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 145.07 6.03 1.00 1 2 896.36938 1791.73149 2.06 19.98 2047 2047 MS2 23/44 Linfeng_081211_IgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 102.75 6.02 1.00 1 2 1353.08398 2705.16069 -0.21 37.10 8674 8674 MS2 20/62 Linfeng_081211_IgG_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 83.12 6.02 1.00 1 2 793.88190 1586.75652 -5.81 27.19 2995 2995 MS2 23/26 Linfeng_091811_SIN3A_3.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 81.84 6.01 1.00 1 2 793.88501 1586.76274 -1.88 27.59 5330 5330 MS2 23/26 Linfeng_081211_IgG_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 75.46 6.01 1.00 1 4 816.88623 3264.52309 2.79 42.96 10441 10441 MS2 40/168 Linfeng_081211_IgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 144.36 6.00 1.00 1 2 896.36505 1791.72283 -2.78 17.73 1693 1693 MS2 23/44 Linfeng_091811_SIN3A_4.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 150.00 6.00 1.00 1 2 896.36395 1791.72063 -4.00 1.86 273 273 MS2 21/44 Linfeng_091811_SIN3A_10.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 92.28 5.99 1.00 1 3 597.91388 1791.72708 -0.40 17.45 1608 1608 MS2 37/88 Linfeng_091611_rIgG_7.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 104.88 5.99 1.00 1 2 1102.00598 2203.00469 -4.49 47.18 5459 5459 MS2 23/34 Linfeng_091611_rIgG_2.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 107.95 5.97 1.00 1 4 689.08698 2753.32607 0.97 52.95 6063 6063 MS2 38/132 Linfeng_091811_SIN3A_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 84.27 5.96 1.00 1 2 793.88501 1586.76274 -1.88 28.49 5743 5743 MS2 23/26 Linfeng_081211_IgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 138.75 5.96 1.00 1 2 1353.08252 2705.15776 -1.29 37.25 8368 8368 MS2 24/62 Linfeng_081211_IgG_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 146.32 5.96 1.00 1 3 968.14362 2902.41629 1.96 48.13 5329 5329 MS2 31/96 Linfeng_091611_rIgG_10.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 93.01 5.96 1.00 1 2 793.88446 1586.76164 -2.58 27.29 5372 5372 MS2 23/26 Linfeng_081211_IgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 142.14 5.95 1.00 1 2 896.36505 1791.72283 -2.78 17.52 1720 1720 MS2 21/44 Linfeng_091611_rIgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 88.52 5.95 1.00 1 2 793.88519 1586.76311 -1.65 27.05 2656 2656 MS2 22/26 Linfeng_091611_rIgG_10.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 88.88 5.94 1.00 1 3 529.58917 1586.75296 -8.05 27.27 2795 2795 MS2 29/52 Linfeng_091811_SIN3A_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 112.95 5.93 1.00 1 2 1048.02087 2095.03447 -1.52 40.56 9363 9363 MS2 20/32 Linfeng_081211_IgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 77.11 5.91 1.00 1 3 529.59088 1586.75809 -4.82 27.06 2496 2496 MS2 28/52 Linfeng_091611_rIgG_3.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 95.19 5.91 1.00 1 2 1102.00952 2203.01177 -1.28 47.09 5665 5665 MS2 21/34 Linfeng_091611_rIgG_4.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 77.49 5.90 1.00 1 3 529.58997 1586.75534 -6.55 27.07 2866 2866 MS2 29/52 Linfeng_091611_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 151.09 5.90 1.00 1 2 896.36670 1791.72612 -0.94 17.71 1709 1709 MS2 25/44 Linfeng_091611_rIgG_6.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 88.06 5.90 1.00 1 2 793.88116 1586.75505 -6.73 27.31 3041 3041 MS2 23/26 Linfeng_091811_SIN3A_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 84.82 5.90 1.00 1 4 816.88470 3264.51699 0.92 43.76 10553 10553 MS2 35/168 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 150.00 5.88 1.00 1 2 896.36401 1791.72075 -3.94 17.69 1795 1795 MS2 22/44 Linfeng_091811_SIN3A_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 94.04 5.88 1.00 1 3 529.59070 1586.75754 -5.16 27.46 3042 3042 MS2 30/52 Linfeng_091811_SIN3A_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 175.19 5.87 1.00 1 2 896.36542 1791.72356 -2.37 17.37 1709 1709 MS2 24/44 Linfeng_091611_rIgG_4.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 91.06 5.87 1.00 1 2 919.48462 1837.96196 -1.92 38.92 9039 9039 MS2 18/30 Linfeng_081211_IgG_10.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 80.70 5.86 1.00 1 3 918.44971 2753.33457 4.06 52.38 12424 12424 MS2 32/88 Linfeng_081211_IgG_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 87.54 5.86 1.00 1 2 793.88202 1586.75676 -5.65 27.43 3038 3038 MS2 23/26 Linfeng_091811_SIN3A_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 183.04 5.86 1.00 1 2 896.36578 1791.72429 -1.96 17.31 1529 1529 MS2 21/44 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 143.98 5.85 1.00 1 2 896.36646 1791.72563 -1.21 15.47 1233 1233 MS2 18/44 Linfeng_091811_SIN3A_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 82.34 5.85 1.00 1 3 699.01544 2095.03177 -2.81 40.86 4760 4760 MS2 30/64 Linfeng_091811_SIN3A_2.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 84.86 5.85 1.00 1 3 735.00726 2203.00724 -3.33 47.61 5829 5829 MS2 33/68 Linfeng_091811_SIN3A_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 92.18 5.84 1.00 1 4 806.57336 3223.27163 -3.14 38.20 5700 5700 MS2 42/234 Linfeng_081211_IgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 92.43 5.84 1.00 1 2 793.88232 1586.75737 -5.27 27.22 2953 2953 MS2 23/26 Linfeng_091811_SIN3A_2.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 78.48 5.84 1.00 1 2 1255.56970 2510.13213 0.10 36.86 8439 8439 MS2 19/44 Linfeng_081211_IgG_6.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 84.47 5.83 1.00 1 3 529.58966 1586.75443 -7.12 27.32 3042 3042 MS2 29/52 Linfeng_091811_SIN3A_4.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 107.85 5.83 1.00 1 3 735.00806 2203.00962 -2.25 47.62 5428 5428 MS2 35/68 Linfeng_091811_SIN3A_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 86.18 5.82 1.00 1 2 793.88080 1586.75432 -7.19 27.37 2832 2832 MS2 23/26 Linfeng_091811_SIN3A_10.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 75.59 5.82 1.00 1 3 529.59235 1586.76249 -2.05 27.96 5208 5208 MS2 29/52 Linfeng_081211_IgG_5.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 85.15 5.81 1.00 1 4 689.08698 2753.32607 0.97 52.86 6072 6072 MS2 38/132 Linfeng_091811_SIN3A_10.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 96.84 5.81 1.00 1 3 699.01495 2095.03031 -3.51 40.69 4856 4856 MS2 30/64 Linfeng_091611_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 148.08 5.81 1.00 1 2 896.36670 1791.72612 -0.94 17.42 1604 1604 MS2 21/44 Linfeng_091611_rIgG_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 86.22 5.81 1.00 1 3 699.01611 2095.03379 -1.85 40.76 4649 4649 MS2 28/64 Linfeng_091611_rIgG_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 81.43 5.78 1.00 1 2 793.88165 1586.75603 -6.11 27.05 2863 2863 MS2 23/26 Linfeng_091611_rIgG_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 90.10 5.78 1.00 1 2 793.88165 1586.75603 -6.11 27.02 2868 2868 MS2 23/26 Linfeng_091611_rIgG_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 84.51 5.78 1.00 1 2 793.88104 1586.75481 -6.88 27.07 2968 2968 MS2 23/26 Linfeng_091811_SIN3A_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 79.26 5.76 1.00 1 2 793.88385 1586.76042 -3.35 27.18 3046 3046 MS2 23/26 Linfeng_091611_rIgG_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK IPI:IPI00019359.4 1 1 CID 78.24 5.76 1.00 1 4 806.57483 3223.27749 -1.32 22.55 3936 3936 MS2 43/234 Linfeng_081211_IgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 148.75 5.76 1.00 1 2 896.36725 1791.72722 -0.32 17.47 1629 1629 MS2 17/44 Linfeng_091811_SIN3A_3.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.12 5.76 1.00 1 2 793.88245 1586.75762 -5.11 27.31 3142 3142 MS2 23/26 Linfeng_091811_SIN3A_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 45.09 5.76 1.00 1 3 529.59192 1586.76120 -2.85 28.86 5385 5385 MS2 27/52 Linfeng_081211_IgG_2.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 56.31 5.74 1.00 1 3 735.00879 2203.01181 -1.26 47.20 5213 5213 MS2 31/68 Linfeng_091611_rIgG_10.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 76.12 5.73 1.00 1 4 848.90265 3392.58877 -5.95 38.93 4627 4627 MS2 40/174 Linfeng_091611_rIgG_4.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 91.88 5.72 1.00 1 2 793.88324 1586.75920 -4.11 27.05 2495 2495 MS2 23/26 Linfeng_091611_rIgG_3.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 84.24 5.72 1.00 1 3 529.59015 1586.75589 -6.20 27.08 2949 2949 MS2 29/52 Linfeng_091611_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 168.20 5.72 1.00 1 2 1353.07703 2705.14678 -5.35 37.53 4356 4356 MS2 25/62 Linfeng_091811_SIN3A_1.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 101.43 5.72 1.00 1 4 689.08453 2753.31630 -2.58 52.32 6094 6094 MS2 41/132 Linfeng_091611_rIgG_2.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 74.04 5.71 1.00 1 4 848.90363 3392.59267 -4.80 39.26 4553 4553 MS2 39/174 Linfeng_091811_SIN3A_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 82.56 5.71 1.00 1 3 529.58990 1586.75516 -6.66 27.40 2883 2883 MS2 30/52 Linfeng_091811_SIN3A_8.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 75.60 5.71 1.00 1 3 699.01630 2095.03434 -1.59 40.56 9365 9365 MS2 28/64 Linfeng_081211_IgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 78.57 5.71 1.00 1 2 793.88147 1586.75566 -6.35 27.08 2948 2948 MS2 23/26 Linfeng_091611_rIgG_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 81.74 5.71 1.00 1 3 529.58966 1586.75443 -7.12 27.40 2836 2836 MS2 28/52 Linfeng_091811_SIN3A_10.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 58.85 5.71 1.00 1 2 616.80145 1232.59563 -1.84 19.96 2009 2009 MS2 25/30 Linfeng_091811_SIN3A_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 118.44 5.69 1.00 1 3 968.14319 2902.41501 1.52 47.83 11265 11265 MS2 25/96 Linfeng_081211_IgG_5.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 80.41 5.69 1.00 1 4 848.90912 3392.61464 1.68 40.54 9665 9665 MS2 37/174 Linfeng_081211_IgG_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 94.77 5.68 1.00 1 2 1048.01892 2095.03057 -3.39 40.73 4665 4665 MS2 22/32 Linfeng_091611_rIgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 84.58 5.68 1.00 1 2 793.88116 1586.75505 -6.73 27.34 2875 2875 MS2 23/26 Linfeng_091811_SIN3A_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 74.25 5.67 1.00 1 3 529.59021 1586.75608 -6.08 27.23 3000 3000 MS2 29/52 Linfeng_091811_SIN3A_3.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 42.68 5.66 1.00 1 3 699.01575 2095.03269 -2.38 41.19 4621 4621 MS2 27/64 Linfeng_091811_SIN3A_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 102.69 5.65 1.00 1 2 1048.02466 2095.04204 2.09 41.35 9809 9809 MS2 21/32 Linfeng_081211_IgG_6.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 105.06 5.65 1.00 1 4 689.08661 2753.32461 0.44 52.44 6259 6259 MS2 38/132 Linfeng_091611_rIgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 123.18 5.64 1.00 1 3 597.91248 1791.72287 -2.75 17.59 1815 1815 MS2 39/88 Linfeng_091611_rIgG_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 83.46 5.63 1.00 1 3 529.59216 1586.76194 -2.39 27.89 5328 5328 MS2 28/52 Linfeng_081211_IgG_7.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 68.40 5.63 1.00 1 2 616.80072 1232.59416 -3.02 19.61 2026 2026 MS2 24/30 Linfeng_091611_rIgG_4.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 64.98 5.63 1.00 1 3 613.32465 1837.95938 -3.32 38.92 4548 4548 MS2 26/60 Linfeng_091811_SIN3A_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 145.93 5.63 1.00 1 3 968.14117 2902.40897 -0.56 48.19 5716 5716 MS2 28/96 Linfeng_091811_SIN3A_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 71.68 5.62 1.00 1 2 616.80078 1232.59429 -2.93 19.56 1928 1928 MS2 22/30 Linfeng_091811_SIN3A_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 61.00 5.61 1.00 1 2 616.80072 1232.59416 -3.02 19.75 2037 2037 MS2 24/30 Linfeng_091611_rIgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 66.93 5.61 1.00 1 2 793.88544 1586.76360 -1.34 28.59 4604 4604 MS2 19/26 Linfeng_081211_IgG_9.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 76.60 5.61 1.00 1 2 616.80292 1232.59856 0.54 20.72 2950 2950 MS2 21/30 Linfeng_081211_IgG_9.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 108.06 5.60 1.00 1 2 1102.00928 2203.01128 -1.50 47.29 5604 5604 MS2 24/34 Linfeng_091811_SIN3A_1.raw High HGVQELEIELQSQLSKK IPI:IPI00019359.4 1 1 CID 27.73 5.60 1.00 1 3 656.02277 1966.05375 -3.42 36.71 4263 4263 MS2 23/64 Linfeng_091811_SIN3A_6.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 34.39 5.60 1.00 1 3 699.01868 2095.04148 1.82 40.72 9724 9724 MS2 27/64 Linfeng_081211_IgG_7.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 97.81 5.60 1.00 1 2 1102.01172 2203.01616 0.72 47.30 11440 11440 MS2 22/34 Linfeng_081211_IgG_8.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 68.41 5.59 1.00 1 3 697.96497 2091.88034 -0.99 15.61 1325 1325 MS2 29/100 Linfeng_091811_SIN3A_9.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 60.79 5.59 1.00 1 3 613.32446 1837.95884 -3.62 38.68 4506 4506 MS2 29/60 Linfeng_091811_SIN3A_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 82.89 5.59 1.00 1 3 529.58960 1586.75425 -7.24 26.91 3042 3042 MS2 29/52 Linfeng_091611_rIgG_4.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 52.16 5.58 1.00 1 3 918.44543 2753.32175 -0.60 52.33 6271 6271 MS2 25/88 Linfeng_091611_rIgG_5.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 65.44 5.57 1.00 1 3 613.32397 1837.95737 -4.42 38.81 4689 4689 MS2 28/60 Linfeng_091811_SIN3A_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 61.06 5.57 1.00 1 3 597.91260 1791.72324 -2.55 14.65 1244 1244 MS2 31/88 Linfeng_091811_SIN3A_1.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 60.72 5.57 1.00 1 3 793.06793 2377.18924 0.41 48.11 8550 8550 MS2 30/80 Linfeng_081211_IgG_1.raw High LASYLDKVQALEEANNDLENKIQDWYDK IPI:IPI00019359.4 1 1 CID 69.45 5.56 1.00 1 4 832.15839 3325.61172 -3.22 45.14 5304 5304 MS2 40/162 Linfeng_091811_SIN3A_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 95.99 5.55 1.00 1 2 793.88635 1586.76543 -0.19 27.67 5283 5283 MS2 22/26 Linfeng_081211_IgG_4.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 82.28 5.54 1.00 1 3 529.59253 1586.76303 -1.70 27.13 2667 2667 MS2 26/52 Linfeng_091611_rIgG_10.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 127.90 5.54 1.00 1 2 896.36700 1791.72673 -0.60 17.73 1480 1480 MS2 17/44 Linfeng_091811_SIN3A_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 81.24 5.54 1.00 1 3 529.59149 1586.75992 -3.66 27.35 3041 3041 MS2 30/52 Linfeng_091611_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 108.52 5.53 1.00 1 2 1255.56714 2510.12700 -1.94 34.76 7956 7956 MS2 22/44 Linfeng_081211_IgG_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 67.29 5.53 1.00 1 3 902.39337 2705.16556 1.59 38.41 8162 8162 MS2 28/124 Linfeng_081211_IgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 52.12 5.53 1.00 1 3 597.91431 1791.72837 0.32 17.24 1269 1269 MS2 32/88 Linfeng_091611_rIgG_3.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 69.80 5.53 1.00 1 3 613.32458 1837.95920 -3.42 38.87 4347 4347 MS2 30/60 Linfeng_091811_SIN3A_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 100.36 5.52 1.00 1 4 816.88226 3264.50722 -2.07 43.18 4947 4947 MS2 35/168 Linfeng_091611_rIgG_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 83.80 5.51 1.00 1 3 529.59229 1586.76230 -2.16 27.32 5381 5381 MS2 25/52 Linfeng_081211_IgG_8.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 94.90 5.51 1.00 1 3 699.01782 2095.03891 0.60 41.65 10418 10418 MS2 30/64 Linfeng_081211_IgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 59.17 5.50 1.00 1 3 597.91315 1791.72489 -1.63 17.71 1686 1686 MS2 34/88 Linfeng_091811_SIN3A_6.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 53.79 5.50 1.00 1 3 697.96570 2091.88254 0.06 16.60 2066 2066 MS2 28/100 Linfeng_081211_IgG_10.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 43.55 5.49 1.00 1 2 616.80157 1232.59587 -1.64 19.35 1714 1714 MS2 22/30 Linfeng_091811_SIN3A_10.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 105.83 5.48 1.00 1 2 1102.01428 2203.02129 3.04 51.24 9328 9328 MS2 20/34 Linfeng_081211_IgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 112.86 5.47 1.00 1 3 597.91412 1791.72782 0.01 20.26 2107 2107 MS2 33/88 Linfeng_081211_IgG_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 122.50 5.46 1.00 1 2 1255.56677 2510.12627 -2.23 34.81 7641 7641 MS2 23/44 Linfeng_081211_IgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 70.46 5.46 1.00 1 3 529.58929 1586.75333 -7.82 27.10 2972 2972 MS2 27/52 Linfeng_091811_SIN3A_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 63.05 5.45 1.00 1 3 968.13806 2902.39963 -3.78 48.05 5545 5545 MS2 21/96 Linfeng_091611_rIgG_9.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 60.37 5.43 1.00 1 3 613.32465 1837.95938 -3.32 38.87 4555 4555 MS2 28/60 Linfeng_091811_SIN3A_4.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.50 5.42 1.00 1 3 529.58972 1586.75461 -7.01 27.03 2869 2869 MS2 28/52 Linfeng_091611_rIgG_2.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 62.75 5.42 1.00 1 3 613.32471 1837.95957 -3.22 38.50 4360 4360 MS2 31/60 Linfeng_091611_rIgG_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 86.06 5.42 1.00 1 3 529.59241 1586.76267 -1.93 28.51 5749 5749 MS2 28/52 Linfeng_081211_IgG_3.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 88.90 5.40 1.00 1 2 616.80090 1232.59453 -2.73 19.73 2122 2122 MS2 24/30 Linfeng_091611_rIgG_8.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 73.72 5.39 1.00 1 3 529.58978 1586.75479 -6.89 26.99 2860 2860 MS2 27/52 Linfeng_091611_rIgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 79.66 5.39 1.00 1 3 529.59192 1586.76120 -2.85 29.68 4782 4782 MS2 27/52 Linfeng_081211_IgG_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.20 5.39 1.00 1 2 793.88525 1586.76323 -1.58 27.84 5163 5163 MS2 23/26 Linfeng_081211_IgG_5.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 61.59 5.39 1.00 1 3 613.32489 1837.96012 -2.92 38.56 4124 4124 MS2 29/60 Linfeng_091611_rIgG_10.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 109.50 5.38 1.00 1 2 1048.02087 2095.03447 -1.52 40.58 9740 9740 MS2 23/32 Linfeng_081211_IgG_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 40.96 5.38 1.00 1 2 616.80206 1232.59685 -0.85 20.80 3306 3306 MS2 19/30 Linfeng_081211_IgG_10.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 71.25 5.37 1.00 1 2 616.80200 1232.59673 -0.94 25.38 3250 3250 MS2 23/30 Linfeng_081211_IgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 114.29 5.37 1.00 1 2 1353.08325 2705.15923 -0.75 37.73 8723 8723 MS2 22/62 Linfeng_081211_IgG_6.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 72.40 5.37 1.00 1 3 613.32452 1837.95902 -3.52 38.67 4475 4475 MS2 29/60 Linfeng_091811_SIN3A_2.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 49.38 5.36 1.00 1 2 616.80121 1232.59514 -2.23 19.54 1842 1842 MS2 21/30 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 29.82 5.35 1.00 1 3 597.91406 1791.72763 -0.09 21.33 2325 2325 MS2 27/88 Linfeng_081211_IgG_1.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 70.53 5.34 1.00 1 3 613.32477 1837.95975 -3.12 38.61 4504 4504 MS2 29/60 Linfeng_091811_SIN3A_3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 28.76 5.33 1.00 1 3 697.96735 2091.88749 2.42 16.41 2004 2004 MS2 31/100 Linfeng_081211_IgG_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 50.81 5.33 1.00 1 2 616.80103 1232.59477 -2.53 19.94 2001 2001 MS2 21/30 Linfeng_091811_SIN3A_6.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 69.04 5.32 1.00 1 3 613.32629 1837.96433 -0.63 38.82 8854 8854 MS2 29/60 Linfeng_081211_IgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 7.00 5.30 1.00 1 3 902.39185 2705.16098 -0.10 44.28 7457 7457 MS2 17/124 Linfeng_081211_IgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 77.43 5.30 1.00 1 3 529.59210 1586.76175 -2.51 27.62 5323 5323 MS2 27/52 Linfeng_081211_IgG_6.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 54.30 5.30 1.00 1 3 613.32446 1837.95884 -3.62 38.69 4538 4538 MS2 28/60 Linfeng_091611_rIgG_6.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 85.25 5.30 1.00 1 3 529.59290 1586.76413 -1.01 32.62 4639 4639 MS2 24/52 Linfeng_081211_IgG_1.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 69.01 5.29 1.00 1 3 613.32428 1837.95829 -3.92 38.45 4563 4563 MS2 28/60 Linfeng_091611_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 37.29 5.29 1.00 1 4 728.59930 2911.37539 -3.36 27.42 2979 2979 MS2 37/156 Linfeng_091811_SIN3A_2.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 49.66 5.29 1.00 1 3 613.32428 1837.95829 -3.92 39.03 4464 4464 MS2 26/60 Linfeng_091811_SIN3A_9.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 84.81 5.29 1.00 1 2 616.80286 1232.59844 0.44 19.65 1674 1674 MS2 17/30 Linfeng_091611_rIgG_10.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 118.87 5.28 1.00 1 2 896.36737 1791.72746 -0.19 17.98 2483 2483 MS2 17/44 Linfeng_081211_IgG_8.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 57.25 5.27 1.00 1 4 848.90802 3392.61025 0.39 42.52 10165 10165 MS2 27/174 Linfeng_081211_IgG_6.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 45.08 5.26 1.00 1 2 616.80255 1232.59783 -0.05 20.46 3258 3258 MS2 21/30 Linfeng_081211_IgG_8.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 121.11 5.26 1.00 1 3 918.44617 2753.32395 0.20 52.21 5676 5676 MS2 30/88 Linfeng_091611_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 146.99 5.25 1.00 1 2 896.36578 1791.72429 -1.96 17.60 1590 1590 MS2 18/44 Linfeng_091811_SIN3A_9.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 82.41 5.25 1.00 1 2 616.80237 1232.59746 -0.35 23.36 2814 2814 MS2 22/30 Linfeng_081211_IgG_1.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 46.35 5.24 1.00 1 3 613.32446 1837.95884 -3.62 38.57 4666 4666 MS2 26/60 Linfeng_091611_rIgG_8.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 80.19 5.22 1.00 1 2 1102.01111 2203.01494 0.16 46.62 10979 10979 MS2 21/34 Linfeng_081211_IgG_5.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 66.80 5.22 1.00 1 2 616.80115 1232.59502 -2.33 19.49 1797 1797 MS2 24/30 Linfeng_091811_SIN3A_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 47.55 5.21 1.00 1 2 616.80219 1232.59709 -0.65 25.12 4689 4689 MS2 19/30 Linfeng_081211_IgG_3.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 86.18 5.21 1.00 1 2 616.80304 1232.59880 0.74 24.38 3034 3034 MS2 21/30 Linfeng_081211_IgG_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 64.83 5.21 1.00 1 2 1255.56934 2510.13140 -0.19 34.92 7670 7670 MS2 20/44 Linfeng_081211_IgG_4.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 38.37 5.20 1.00 1 3 613.32379 1837.95682 -4.72 39.08 4416 4416 MS2 25/60 Linfeng_091811_SIN3A_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 38.26 5.20 1.00 1 2 616.80109 1232.59490 -2.43 19.84 2008 2008 MS2 21/30 Linfeng_091611_rIgG_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 41.45 5.20 1.00 1 4 726.35651 2902.40420 -2.20 48.13 5731 5731 MS2 29/144 Linfeng_091611_rIgG_6.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 60.04 5.20 1.00 1 2 616.79907 1232.59087 -5.70 19.82 2100 2100 MS2 24/30 Linfeng_091811_SIN3A_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 111.56 5.19 1.00 1 2 896.36688 1791.72649 -0.73 17.97 1520 1520 MS2 14/44 Linfeng_091811_SIN3A_10.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 37.40 5.19 1.00 1 3 613.32690 1837.96616 0.36 39.93 9450 9450 MS2 24/60 Linfeng_081211_IgG_7.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 58.93 5.19 1.00 1 2 616.80042 1232.59355 -3.52 19.58 1894 1894 MS2 25/30 Linfeng_091811_SIN3A_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 96.71 5.18 1.00 1 2 896.36835 1791.72942 0.90 23.03 2734 2734 MS2 20/44 Linfeng_081211_IgG_1.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 58.74 5.18 1.00 1 3 613.32428 1837.95829 -3.92 38.89 4325 4325 MS2 28/60 Linfeng_091811_SIN3A_7.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.55 5.18 1.00 1 2 793.88544 1586.76360 -1.34 31.59 4424 4424 MS2 19/26 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 40.54 5.17 1.00 1 2 616.80151 1232.59575 -1.74 20.92 3111 3111 MS2 17/30 Linfeng_081211_IgG_5.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 16.65 5.17 1.00 1 3 793.06763 2377.18833 0.03 40.17 9456 9456 MS2 21/80 Linfeng_081211_IgG_6.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 59.59 5.16 1.00 1 3 613.32520 1837.96103 -2.43 38.56 4445 4445 MS2 29/60 Linfeng_091611_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 17.52 5.15 1.00 1 4 726.35791 2902.40981 -0.27 48.48 5943 5943 MS2 26/144 Linfeng_091811_SIN3A_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 111.11 5.15 1.00 1 2 896.36530 1791.72331 -2.50 17.91 1578 1578 MS2 18/44 Linfeng_091811_SIN3A_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 60.70 5.14 1.00 1 2 616.80243 1232.59758 -0.25 20.53 3267 3267 MS2 22/30 Linfeng_081211_IgG_6.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 64.53 5.14 1.00 1 2 616.80194 1232.59661 -1.04 19.63 1847 1847 MS2 20/30 Linfeng_091611_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 92.33 5.11 1.00 1 2 896.36768 1791.72807 0.15 18.59 2455 2455 MS2 20/44 Linfeng_081211_IgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 91.75 5.11 1.00 1 2 896.36792 1791.72856 0.43 18.57 2414 2414 MS2 18/44 Linfeng_081211_IgG_5.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 79.11 5.10 1.00 1 3 529.59259 1586.76322 -1.58 33.63 4813 4813 MS2 27/52 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 83.76 5.10 1.00 1 2 616.80255 1232.59783 -0.05 24.26 4243 4243 MS2 17/30 Linfeng_081211_IgG_4.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 56.18 5.10 1.00 1 3 613.32623 1837.96415 -0.73 42.04 10134 10134 MS2 23/60 Linfeng_081211_IgG_8.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 61.16 5.09 1.00 1 2 616.80139 1232.59551 -1.93 19.77 1955 1955 MS2 22/30 Linfeng_091811_SIN3A_3.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 61.84 5.09 1.00 1 3 613.32440 1837.95865 -3.72 38.43 3944 3944 MS2 28/60 Linfeng_091611_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 65.28 5.07 1.00 1 2 1255.56738 2510.12749 -1.75 37.15 8896 8896 MS2 19/44 Linfeng_081211_IgG_3.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 46.84 5.06 1.00 1 3 793.06775 2377.18869 0.18 37.71 8708 8708 MS2 28/80 Linfeng_081211_IgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 93.94 5.05 1.00 1 2 896.36877 1791.73027 1.38 17.46 1404 1404 MS2 17/44 Linfeng_091611_rIgG_10.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 123.28 5.05 1.00 1 2 1048.02380 2095.04033 1.27 41.68 10429 10429 MS2 20/32 Linfeng_081211_IgG_3.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 77.46 5.04 1.00 1 2 616.80066 1232.59404 -3.12 19.42 1712 1712 MS2 22/30 Linfeng_091811_SIN3A_7.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 6.45 5.03 1.00 1 3 793.06226 2377.17221 -6.75 37.36 4214 4214 MS2 20/80 Linfeng_091611_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 113.64 5.03 1.00 1 2 896.36768 1791.72807 0.15 14.47 1143 1143 MS2 19/44 Linfeng_091811_SIN3A_7.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 47.87 5.03 1.00 1 2 616.80310 1232.59892 0.84 22.35 2567 2567 MS2 21/30 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 72.16 5.02 1.00 1 2 616.80103 1232.59477 -2.53 19.62 1841 1841 MS2 24/30 Linfeng_091611_rIgG_2.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 47.09 5.00 1.00 1 2 616.80072 1232.59416 -3.02 19.88 1906 1906 MS2 18/30 Linfeng_091811_SIN3A_9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 28.95 4.99 1.00 1 3 968.13885 2902.40201 -2.96 48.17 5736 5736 MS2 14/96 Linfeng_091611_rIgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 119.50 4.98 1.00 1 2 896.36566 1791.72405 -2.10 18.47 1774 1774 MS2 17/44 Linfeng_091811_SIN3A_1.raw High YcGQLQmIQEQISNLEAQITDVR IPI:IPI00019359.4 1 1 CID "C2(Carbamidomethyl), M7(Oxidation)" 57.44 4.96 1.00 1 4 689.08704 2753.32631 1.06 52.46 6068 6068 MS2 37/132 Linfeng_091611_rIgG_9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 59.91 4.96 1.00 1 4 726.35742 2902.40786 -0.94 47.93 5771 5771 MS2 27/144 Linfeng_091611_rIgG_4.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 76.46 4.95 1.00 1 3 529.59027 1586.75626 -5.97 27.49 2946 2946 MS2 28/52 Linfeng_091811_SIN3A_9.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 86.51 4.95 1.00 1 4 728.59778 2911.36928 -5.46 27.02 2865 2865 MS2 45/156 Linfeng_091611_rIgG_1.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 114.67 4.95 1.00 1 2 896.36670 1791.72612 -0.94 17.16 1261 1261 MS2 16/44 Linfeng_091611_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR IPI:IPI00019359.4 1 1 CID 111.53 4.94 1.00 1 2 1353.08289 2705.15849 -1.02 38.42 9330 9330 MS2 24/62 Linfeng_081211_IgG_3.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 95.44 4.93 1.00 1 2 919.48767 1837.96807 1.40 39.05 8961 8961 MS2 18/30 Linfeng_081211_IgG_4.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 108.15 4.92 1.00 1 2 1048.02014 2095.03301 -2.22 40.91 4668 4668 MS2 13/32 Linfeng_091611_rIgG_2.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 62.75 4.91 1.00 1 3 699.01770 2095.03855 0.42 40.58 9431 9431 MS2 23/64 Linfeng_081211_IgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 69.28 4.90 1.00 1 2 896.36951 1791.73174 2.20 24.06 2968 2968 MS2 19/44 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 65.30 4.88 1.00 1 2 616.80237 1232.59746 -0.35 21.66 3502 3502 MS2 20/30 Linfeng_081211_IgG_3.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 64.47 4.88 1.00 1 2 616.80225 1232.59722 -0.55 21.07 3235 3235 MS2 21/30 Linfeng_081211_IgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 94.59 4.88 1.00 1 3 968.13873 2902.40165 -3.08 47.99 5557 5557 MS2 29/96 Linfeng_091611_rIgG_2.raw High LASYLDKVQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 35.40 4.88 1.00 1 3 793.06342 2377.17569 -5.29 37.45 4212 4212 MS2 26/80 Linfeng_091611_rIgG_9.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 56.88 4.87 1.00 1 2 616.80170 1232.59612 -1.44 19.63 1918 1918 MS2 21/30 Linfeng_091611_rIgG_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 94.99 4.86 1.00 1 2 1048.02234 2095.03740 -0.13 40.60 9436 9436 MS2 18/32 Linfeng_081211_IgG_4.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 59.66 4.86 1.00 1 2 616.80219 1232.59709 -0.65 19.51 1524 1524 MS2 17/30 Linfeng_091611_rIgG_3.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 52.50 4.85 1.00 1 3 529.59338 1586.76560 -0.08 27.70 5290 5290 MS2 24/52 Linfeng_081211_IgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 35.60 4.83 1.00 1 4 726.35669 2902.40493 -1.95 48.54 5541 5541 MS2 28/144 Linfeng_091811_SIN3A_7.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 57.98 4.83 1.00 1 3 699.01807 2095.03965 0.95 41.29 9795 9795 MS2 28/64 Linfeng_081211_IgG_6.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 45.58 4.83 1.00 1 3 613.32697 1837.96634 0.46 38.80 9000 9000 MS2 25/60 Linfeng_081211_IgG_10.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 76.28 4.81 1.00 1 2 1048.02466 2095.04204 2.09 40.43 9568 9568 MS2 17/32 Linfeng_081211_IgG_10.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 66.98 4.79 1.00 1 3 735.01202 2203.02152 3.15 51.19 9314 9314 MS2 23/68 Linfeng_081211_IgG_1.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 64.54 4.79 1.00 1 2 658.34558 1315.68389 -1.06 37.01 5448 5448 MS2 18/22 Linfeng_081211_IgG_1.raw High HGVQELEIELQSQLSK IPI:IPI00019359.4 1 1 CID 54.65 4.77 1.00 1 3 613.32501 1837.96048 -2.72 38.53 4350 4350 MS2 29/60 Linfeng_091611_rIgG_9.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 35.45 4.77 1.00 1 2 616.80127 1232.59526 -2.13 26.39 3455 3455 MS2 18/30 Linfeng_081211_IgG_1.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 78.37 4.76 1.00 1 3 529.59210 1586.76175 -2.51 28.67 4618 4618 MS2 24/52 Linfeng_081211_IgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 103.39 4.76 1.00 1 2 896.36877 1791.73027 1.38 18.97 1850 1850 MS2 19/44 Linfeng_081211_IgG_1.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 95.53 4.75 1.00 1 2 1255.56909 2510.13091 -0.38 46.37 8093 8093 MS2 19/44 Linfeng_081211_IgG_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 48.19 4.75 1.00 1 3 968.13904 2902.40256 -2.77 47.96 5590 5590 MS2 17/96 Linfeng_091611_rIgG_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 47.85 4.73 1.00 1 4 726.35699 2902.40615 -1.53 47.99 5558 5558 MS2 27/144 Linfeng_091611_rIgG_2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 34.25 4.72 1.00 1 3 697.96625 2091.88419 0.85 16.45 2031 2031 MS2 26/100 Linfeng_081211_IgG_6.raw High SDLEmQYETLQEELMALK IPI:IPI00019359.4 1 1 CID M5(Oxidation) 53.05 4.71 1.00 1 3 729.67731 2187.01737 -1.05 49.01 5819 5819 MS2 23/68 Linfeng_091811_SIN3A_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID 54.27 4.70 1.00 1 4 724.60138 2895.38369 -2.27 29.47 2810 2810 MS2 34/156 Linfeng_091611_rIgG_3.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 60.84 4.69 1.00 1 2 658.34302 1315.67876 -4.96 31.56 3574 3574 MS2 19/22 Linfeng_091811_SIN3A_1.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 73.71 4.67 1.00 1 2 1102.01221 2203.01714 1.16 47.22 11550 11550 MS2 17/34 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 69.15 4.64 1.00 1 3 597.91498 1791.73038 1.44 17.48 1407 1407 MS2 25/88 Linfeng_091611_rIgG_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 74.30 4.64 1.00 1 4 728.59967 2911.37685 -2.86 27.22 3051 3051 MS2 42/156 Linfeng_091611_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 82.80 4.64 1.00 1 2 896.36920 1791.73113 1.86 21.00 2264 2264 MS2 19/44 Linfeng_081211_IgG_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 40.11 4.62 1.00 1 4 728.59930 2911.37539 -3.36 27.19 2890 2890 MS2 37/156 Linfeng_091611_rIgG_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 3.68 4.60 1.00 1 3 968.13770 2902.39853 -4.15 48.26 5729 5729 MS2 15/96 Linfeng_091811_SIN3A_3.raw High IKFEMEQNLR IPI:IPI00019359.4 1 1 CID 48.35 4.60 1.00 1 3 436.56363 1307.67633 -1.05 30.23 6027 6027 MS2 20/36 Linfeng_081211_IgG_5.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 68.52 4.59 1.00 1 4 728.59808 2911.37050 -5.04 27.19 2984 2984 MS2 47/156 Linfeng_091811_SIN3A_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK IPI:IPI00019359.4 1 1 CID M6(Oxidation) 51.55 4.59 1.00 1 4 728.59894 2911.37392 -3.87 27.09 3066 3066 MS2 42/156 Linfeng_091611_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 59.55 4.58 1.00 1 4 726.35724 2902.40713 -1.19 48.06 5637 5637 MS2 26/144 Linfeng_091611_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 82.73 4.58 1.00 1 3 597.91266 1791.72342 -2.44 17.83 1725 1725 MS2 36/88 Linfeng_091611_rIgG_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 80.55 4.57 1.00 1 4 726.35522 2902.39907 -3.97 47.96 5147 5147 MS2 26/144 Linfeng_091611_rIgG_3.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 62.36 4.55 1.00 1 2 658.34406 1315.68083 -3.38 31.60 3475 3475 MS2 19/22 Linfeng_091611_rIgG_2.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 22.76 4.54 1.00 1 3 529.59113 1586.75882 -4.35 27.18 3158 3158 MS2 24/52 Linfeng_091611_rIgG_8.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 66.10 4.54 1.00 1 4 848.90289 3392.58974 -5.66 38.84 3997 3997 MS2 37/174 Linfeng_091611_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 118.28 4.53 1.00 1 3 968.14410 2902.41776 2.47 49.50 11845 11845 MS2 23/96 Linfeng_081211_IgG_8.raw High EIETYHNLLEGGQEDFESSGAGK IPI:IPI00019359.4 1 1 CID 26.58 4.52 1.00 1 4 628.28827 2510.13125 -0.25 34.96 7684 7684 MS2 31/132 Linfeng_081211_IgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 53.57 4.52 1.00 1 4 726.35748 2902.40810 -0.86 48.28 5741 5741 MS2 28/144 Linfeng_091811_SIN3A_4.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 53.96 4.52 1.00 1 2 658.34595 1315.68462 -0.50 32.68 7265 7265 MS2 19/22 Linfeng_081211_IgG_3.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 46.09 4.51 1.00 1 2 1102.01270 2203.01811 1.60 51.19 9315 9315 MS2 17/34 Linfeng_081211_IgG_1.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 57.40 4.50 1.00 1 2 658.34607 1315.68486 -0.32 31.98 6722 6722 MS2 19/22 Linfeng_081211_IgG_4.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 24.59 4.49 1.00 1 3 735.01196 2203.02134 3.07 47.28 12210 12210 MS2 20/68 Linfeng_081211_IgG_3.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 58.96 4.49 1.00 1 2 658.34381 1315.68035 -3.75 31.55 3664 3664 MS2 19/22 Linfeng_091611_rIgG_4.raw High IKFEMEQNLR IPI:IPI00019359.4 1 1 CID 52.17 4.47 1.00 1 3 436.56247 1307.67286 -3.71 29.36 3279 3279 MS2 21/36 Linfeng_091811_SIN3A_1.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 62.20 4.46 1.00 1 2 658.34460 1315.68193 -2.55 31.60 3551 3551 MS2 19/22 Linfeng_091611_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 66.18 4.45 1.00 1 4 726.35657 2902.40444 -2.12 48.27 5699 5699 MS2 27/144 Linfeng_091811_SIN3A_2.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 60.64 4.44 1.00 1 2 658.34534 1315.68340 -1.43 32.21 6694 6694 MS2 19/22 Linfeng_081211_IgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 69.38 4.43 1.00 1 3 597.91272 1791.72361 -2.34 17.67 1601 1601 MS2 33/88 Linfeng_091811_SIN3A_9.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 79.13 4.43 1.00 1 2 618.26721 1235.52715 -1.31 19.76 3055 3055 MS2 18/24 Linfeng_081211_IgG_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 55.73 4.39 1.00 1 4 726.35651 2902.40420 -2.20 48.43 5747 5747 MS2 26/144 Linfeng_091811_SIN3A_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 21.18 4.36 1.00 1 3 968.13837 2902.40055 -3.46 48.47 5752 5752 MS2 18/96 Linfeng_091811_SIN3A_6.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 92.31 4.35 1.00 1 2 1048.02441 2095.04155 1.85 40.70 9717 9717 MS2 16/32 Linfeng_081211_IgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 59.32 4.34 1.00 1 4 726.35529 2902.39931 -3.89 48.34 5533 5533 MS2 25/144 Linfeng_091811_SIN3A_10.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 55.75 4.34 1.00 1 2 658.34546 1315.68364 -1.25 32.12 6788 6788 MS2 19/22 Linfeng_081211_IgG_7.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 61.21 4.34 1.00 1 2 658.34613 1315.68498 -0.23 31.93 6753 6753 MS2 19/22 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 38.40 4.29 1.00 1 3 597.91400 1791.72745 -0.20 14.80 1172 1172 MS2 28/88 Linfeng_091811_SIN3A_7.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 74.53 4.29 1.00 1 2 618.26752 1235.52776 -0.81 18.85 2744 2744 MS2 21/24 Linfeng_081211_IgG_6.raw High FSSSGGGGGGGRFSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 31.34 4.28 1.00 1 3 733.65356 2198.94614 0.66 21.69 3584 3584 MS2 25/96 Linfeng_081211_IgG_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 36.34 4.27 1.00 1 3 968.13702 2902.39652 -4.85 48.31 5921 5921 MS2 17/96 Linfeng_091811_SIN3A_5.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 33.51 4.26 1.00 1 2 616.80212 1232.59697 -0.75 25.30 4385 4385 MS2 13/30 Linfeng_081211_IgG_2.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 28.50 4.26 1.00 1 2 616.80292 1232.59856 0.54 20.75 3098 3098 MS2 12/30 Linfeng_081211_IgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 121.71 4.26 1.00 1 2 896.36786 1791.72844 0.36 18.31 2538 2538 MS2 18/44 Linfeng_081211_IgG_10.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 83.13 4.26 1.00 1 2 618.26807 1235.52886 0.08 21.01 2266 2266 MS2 22/24 Linfeng_081211_IgG_1.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 35.60 4.24 1.00 1 2 658.34674 1315.68620 0.70 32.86 6582 6582 MS2 18/22 Linfeng_081211_IgG_2.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 76.90 4.23 1.00 1 2 618.26477 1235.52226 -5.26 18.08 1886 1886 MS2 22/24 Linfeng_091611_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 69.17 4.21 1.00 1 2 896.36743 1791.72759 -0.12 25.35 3245 3245 MS2 15/44 Linfeng_081211_IgG_1.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 51.36 4.20 1.00 1 2 658.34583 1315.68437 -0.69 33.23 5462 5462 MS2 18/22 Linfeng_081211_IgG_9.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 56.75 4.19 1.00 1 2 618.26624 1235.52519 -2.89 17.74 1638 1638 MS2 21/24 Linfeng_091811_SIN3A_2.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 77.27 4.17 1.00 1 2 618.26538 1235.52349 -4.27 17.01 1395 1395 MS2 17/24 Linfeng_091811_SIN3A_7.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 93.25 4.16 1.00 1 2 618.26575 1235.52422 -3.68 18.13 1806 1806 MS2 22/24 Linfeng_091611_rIgG_5.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 68.81 4.16 1.00 1 2 618.26672 1235.52617 -2.10 18.03 1691 1691 MS2 18/24 Linfeng_091611_rIgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 32.92 4.16 1.00 1 4 816.88550 3264.52016 1.90 42.50 10219 10219 MS2 32/168 Linfeng_081211_IgG_10.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK IPI:IPI00019359.4 1 1 CID 66.19 4.15 1.00 1 4 848.90955 3392.61635 2.18 49.72 8962 8962 MS2 33/174 Linfeng_081211_IgG_1.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 62.12 4.13 1.00 1 2 618.26764 1235.52800 -0.61 19.36 2653 2653 MS2 19/24 Linfeng_081211_IgG_5.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 80.90 4.11 1.00 1 2 618.26648 1235.52568 -2.49 18.25 1760 1760 MS2 19/24 Linfeng_091811_SIN3A_6.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 74.56 4.10 1.00 1 2 1048.02429 2095.04131 1.74 42.23 10614 10614 MS2 19/32 Linfeng_081211_IgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 68.34 4.04 1.00 1 2 896.36920 1791.73113 1.86 19.62 2988 2988 MS2 19/44 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 111.13 4.02 1.00 1 2 896.36780 1791.72832 0.29 18.28 2390 2390 MS2 14/44 Linfeng_081211_IgG_9.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 73.96 4.00 1.00 1 2 618.26563 1235.52397 -3.88 19.05 2776 2776 MS2 20/24 Linfeng_081211_IgG_10.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 82.05 3.99 1.00 1 2 618.26776 1235.52825 -0.42 20.37 3017 3017 MS2 14/24 Linfeng_081211_IgG_7.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 69.13 3.95 1.00 1 2 618.26538 1235.52349 -4.27 18.95 2539 2539 MS2 17/24 Linfeng_081211_IgG_9.raw High VQALEEANNDLENK IPI:IPI00019359.4 1 1 CID 50.28 3.91 1.00 1 2 793.88800 1586.76872 1.89 27.57 5092 5092 MS2 15/26 Linfeng_081211_IgG_2.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 54.67 3.90 1.00 1 2 618.26685 1235.52641 -1.90 18.75 2726 2726 MS2 16/24 Linfeng_081211_IgG_8.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 91.69 3.80 1.00 1 2 618.26831 1235.52934 0.47 19.88 3057 3057 MS2 17/24 Linfeng_081211_IgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 75.35 3.73 1.00 1 2 896.36871 1791.73015 1.31 19.15 2631 2631 MS2 18/44 Linfeng_081211_IgG_3.raw High DQIVDLTVGNNK IPI:IPI00019359.4 1 1 CID 32.38 3.73 1.00 1 2 658.34601 1315.68474 -0.41 31.65 6853 6853 MS2 19/22 Linfeng_081211_IgG_8.raw High SDLEmQYETLQEELmALK IPI:IPI00019359.4 1 1 CID "M5(Oxidation), M15(Oxidation)" 46.96 3.69 1.00 1 2 1102.01306 2203.01885 1.94 46.58 10779 10779 MS2 16/34 Linfeng_081211_IgG_4.raw High QEIEcQNQEYSLLLSIK IPI:IPI00019359.4 1 1 CID C5(Carbamidomethyl) 64.87 3.67 1.00 1 2 1048.02295 2095.03862 0.46 47.36 8380 8380 MS2 14/32 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 4.10 3.65 1.00 1 2 616.80115 1232.59502 -2.33 28.27 3763 3763 MS2 11/30 Linfeng_081211_IgG_1.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 58.58 3.64 1.00 1 2 618.26703 1235.52678 -1.60 20.07 3070 3070 MS2 16/24 Linfeng_081211_IgG_10.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 63.21 3.63 1.00 1 2 618.26935 1235.53142 2.15 21.04 3038 3038 MS2 13/24 Linfeng_081211_IgG_2.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 35.20 3.62 1.00 1 2 616.80212 1232.59697 -0.75 29.70 4044 4044 MS2 12/30 Linfeng_081211_IgG_1.raw High QGVDADINGLR IPI:IPI00019359.4 1 1 CID 57.39 3.61 1.00 1 2 579.29803 1157.58879 -1.90 36.41 5331 5331 MS2 16/20 Linfeng_081211_IgG_1.raw High SGGGGGGGLGSGGSIR IPI:IPI00019359.4 1 1 CID 21.48 3.60 1.00 1 2 616.80322 1232.59917 1.04 21.88 3305 3305 MS2 14/30 Linfeng_081211_IgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR IPI:IPI00019359.4 1 1 CID 45.45 3.57 1.00 1 2 896.36755 1791.72783 0.02 17.99 2475 2475 MS2 15/44 Linfeng_081211_IgG_6.raw High NYSPYYNTIDDLK IPI:IPI00019359.4 1 1 CID 80.06 3.55 1.00 1 2 803.37396 1605.74065 -1.56 34.26 7776 7776 MS2 20/24 Linfeng_081211_IgG_8.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 72.10 3.53 1.00 1 2 618.26801 1235.52873 -0.02 19.92 2895 2895 MS2 13/24 Linfeng_081211_IgG_3.raw High FSSSSGYGGGSSR IPI:IPI00019359.4 1 1 CID 60.82 3.48 1.00 1 2 618.26874 1235.53020 1.16 20.00 2055 2055 MS2 15/24 Linfeng_081211_IgG_1.raw IPI:IPI00021304.1 645 65.8 8.00 "Keratin, type II cytoskeletal 2 epidermal" 77.21 679 37 2335.77 61.86 252 29 2331.87 69.46 211 30 1958.29 64.96 216 27 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 185.89 9.60 1.00 1 3 944.40027 2831.18625 -2.86 39.76 4114 4114 MS2 51/140 Linfeng_091611_rIgG_3.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 148.75 9.06 1.00 1 3 944.40228 2831.19229 -0.73 39.87 4535 4535 MS2 49/140 Linfeng_091611_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR 1 0 CID 240.27 8.78 1.00 1 3 944.40063 2831.18735 -2.47 39.97 4643 4643 MS2 52/140 Linfeng_091811_SIN3A_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 181.17 8.75 1.00 1 3 944.40057 2831.18717 -2.54 39.86 4522 4522 MS2 51/140 Linfeng_091611_rIgG_9.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 99.28 8.11 1.00 1 3 834.35992 2501.06522 -0.84 20.90 2156 2156 MS2 40/112 Linfeng_091611_rIgG_6.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 148.75 8.06 1.00 1 3 944.40009 2831.18570 -3.05 39.89 4751 4751 MS2 48/140 Linfeng_091611_rIgG_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 143.21 7.65 1.00 1 3 1022.16626 3064.48423 -1.65 39.81 4660 4660 MS2 37/104 Linfeng_091811_SIN3A_3.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 146.12 7.63 1.00 1 3 1022.16650 3064.48496 -1.41 40.03 4704 4704 MS2 40/104 Linfeng_091811_SIN3A_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 96.02 7.48 1.00 1 3 944.40369 2831.19651 0.76 39.83 9207 9207 MS2 36/140 Linfeng_081211_IgG_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 300.00 7.48 1.00 1 3 1022.16504 3064.48056 -2.85 39.64 4718 4718 MS2 35/104 Linfeng_091611_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR 1 0 CID 98.06 7.46 1.00 1 3 613.64008 1838.90567 -4.81 38.00 4235 4235 MS2 40/84 Linfeng_091811_SIN3A_10.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 300.00 7.45 1.00 1 3 1022.16553 3064.48203 -2.37 39.78 4618 4618 MS2 39/104 Linfeng_091811_SIN3A_2.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 122.13 7.40 1.00 1 3 733.38354 2198.13608 -2.36 42.40 4452 4452 MS2 32/72 Linfeng_091611_rIgG_3.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 145.40 7.39 1.00 1 3 715.31738 2143.93760 -3.41 29.74 3224 3224 MS2 29/68 Linfeng_091611_rIgG_9.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 142.39 7.36 1.00 1 2 919.95697 1838.90666 -4.27 37.48 3823 3823 MS2 25/42 Linfeng_091611_rIgG_3.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 120.27 7.29 1.00 1 3 715.31750 2143.93796 -3.23 29.70 3217 3217 MS2 30/68 Linfeng_091611_rIgG_1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 136.18 7.29 1.00 1 3 1022.16583 3064.48294 -2.07 39.65 4495 4495 MS2 36/104 Linfeng_091611_rIgG_9.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 124.94 7.28 1.00 1 3 1016.83453 3048.48905 -1.75 42.08 4951 4951 MS2 36/104 Linfeng_091811_SIN3A_3.raw High SISISVAGGGGGFGAAGGFGGR 1 0 CID 136.37 7.28 1.00 1 2 919.95648 1838.90569 -4.80 38.10 4249 4249 MS2 26/42 Linfeng_091811_SIN3A_10.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 104.89 7.28 1.00 1 3 613.64026 1838.90622 -4.51 37.49 3824 3824 MS2 42/84 Linfeng_091611_rIgG_3.raw High TSQNSELNNmQDLVEDYK 1 0 CID M10(Oxidation) 150.00 7.24 1.00 1 3 715.31671 2143.93558 -4.34 29.86 3347 3347 MS2 29/68 Linfeng_091811_SIN3A_1.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 109.48 7.19 1.00 1 3 1016.83466 3048.48941 -1.63 42.15 4955 4955 MS2 34/104 Linfeng_091811_SIN3A_1.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 121.09 7.13 1.00 1 3 825.40027 2474.18625 -2.63 33.45 3822 3822 MS2 29/96 Linfeng_091811_SIN3A_1.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 104.45 7.12 1.00 1 3 733.38464 2198.13938 -0.86 42.55 4633 4633 MS2 34/72 Linfeng_091611_rIgG_10.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 132.17 7.09 1.00 1 3 1022.16803 3064.48954 0.08 39.62 9079 9079 MS2 32/104 Linfeng_081211_IgG_5.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 141.42 7.08 1.00 1 3 1022.16364 3064.47635 -4.22 39.89 4664 4664 MS2 31/104 Linfeng_091811_SIN3A_1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 136.65 7.08 1.00 1 3 1022.16333 3064.47544 -4.52 39.96 4843 4843 MS2 36/104 Linfeng_091811_SIN3A_5.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 69.84 7.03 1.00 1 3 825.40027 2474.18625 -2.63 33.32 3297 3297 MS2 29/96 Linfeng_091611_rIgG_3.raw High SKEEAEALYHSKYEELQVTVGR 1 0 CID 80.59 6.98 1.00 1 4 642.32257 2566.26845 -3.90 30.79 3399 3399 MS2 39/126 Linfeng_091811_SIN3A_9.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 91.66 6.94 1.00 1 3 825.40057 2474.18717 -2.26 34.34 3425 3425 MS2 31/96 Linfeng_091611_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 99.62 6.92 1.00 1 3 825.39984 2474.18497 -3.15 33.71 3686 3686 MS2 34/96 Linfeng_091811_SIN3A_10.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 124.51 6.91 1.00 1 3 944.40344 2831.19577 0.50 46.08 8008 8008 MS2 39/140 Linfeng_081211_IgG_1.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 137.73 6.86 1.00 1 3 1016.83295 3048.48429 -3.31 42.08 4917 4917 MS2 37/104 Linfeng_091811_SIN3A_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 128.68 6.84 1.00 1 3 1364.69287 4092.06406 -2.15 44.95 5281 5281 MS2 33/172 Linfeng_091811_SIN3A_2.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 121.03 6.82 1.00 1 3 825.40143 2474.18973 -1.22 33.64 3881 3881 MS2 31/96 Linfeng_091811_SIN3A_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 146.12 6.80 1.00 1 3 1022.16614 3064.48386 -1.77 39.74 4518 4518 MS2 35/104 Linfeng_091611_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 134.92 6.76 1.00 1 2 871.37555 1741.74382 -2.72 18.52 1781 1781 MS2 22/44 Linfeng_091811_SIN3A_1.raw High WELLQQmNVGTRPINLEPIFQGYIDSLK IPI:IPI00021304.1 1 1 CID M7(Oxidation) 143.31 6.74 1.00 1 3 1106.90930 3318.71335 -1.78 50.15 5420 5420 MS2 32/108 Linfeng_091611_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 91.42 6.74 1.00 1 3 825.40088 2474.18808 -1.89 33.17 7122 7122 MS2 27/96 Linfeng_081211_IgG_4.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 31.41 6.74 1.00 1 3 613.64014 1838.90586 -4.71 37.60 4453 4453 MS2 33/84 Linfeng_091611_rIgG_4.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 80.97 6.73 1.00 1 3 825.40088 2474.18808 -1.89 33.52 3843 3843 MS2 29/96 Linfeng_091811_SIN3A_3.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 141.16 6.69 1.00 1 3 715.31750 2143.93796 -3.23 29.85 3245 3245 MS2 29/68 Linfeng_091611_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 129.75 6.66 1.00 1 2 919.96075 1838.91423 -0.15 39.17 9325 9325 MS2 20/42 Linfeng_081211_IgG_8.raw High TSQNSELNNMQDLVEDYK 1 0 CID 129.24 6.62 1.00 1 3 709.98431 2127.93839 -5.45 38.52 4486 4486 MS2 35/68 Linfeng_091811_SIN3A_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 140.85 6.61 1.00 1 2 871.37677 1741.74626 -1.31 18.45 1677 1677 MS2 23/44 Linfeng_091611_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 74.53 6.55 1.00 1 3 825.40039 2474.18662 -2.48 33.42 3698 3698 MS2 27/96 Linfeng_091611_rIgG_9.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 137.78 6.52 1.00 1 2 871.37811 1741.74895 0.23 18.61 1789 1789 MS2 21/44 Linfeng_091811_SIN3A_3.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 149.55 6.46 1.00 1 2 871.37708 1741.74687 -0.96 18.44 1686 1686 MS2 24/44 Linfeng_091611_rIgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 144.77 6.45 1.00 1 2 871.37708 1741.74687 -0.96 18.59 1769 1769 MS2 24/44 Linfeng_091611_rIgG_7.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 110.14 6.42 1.00 1 2 1237.59827 2474.18926 -1.41 33.40 7141 7141 MS2 25/48 Linfeng_081211_IgG_5.raw High YGSGGGSKGGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 50.88 6.41 1.00 1 3 630.95660 1890.85526 -1.32 17.66 1578 1578 MS2 33/88 Linfeng_091611_rIgG_1.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 100.95 6.39 1.00 1 3 825.39948 2474.18387 -3.59 33.71 3656 3656 MS2 28/96 Linfeng_091811_SIN3A_7.raw High TSQNSELNNmQDLVEDYK 1 0 CID M10(Oxidation) 131.41 6.39 1.00 1 3 715.31775 2143.93869 -2.89 30.09 3204 3204 MS2 30/68 Linfeng_091811_SIN3A_10.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 143.21 6.39 1.00 1 2 871.37634 1741.74541 -1.80 18.79 1842 1842 MS2 22/44 Linfeng_091811_SIN3A_4.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 135.07 6.38 1.00 1 2 871.37640 1741.74553 -1.73 18.40 1728 1728 MS2 24/44 Linfeng_091811_SIN3A_2.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 128.21 6.36 1.00 1 2 871.37622 1741.74516 -1.94 18.51 1870 1870 MS2 21/44 Linfeng_091611_rIgG_4.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 81.78 6.35 1.00 1 3 825.40082 2474.18790 -1.96 33.31 3462 3462 MS2 26/96 Linfeng_091611_rIgG_10.raw High NKLNDLEEALQQAKEDLAR 1 0 CID 86.53 6.32 1.00 1 3 733.38428 2198.13828 -1.36 42.81 5047 5047 MS2 31/72 Linfeng_091811_SIN3A_6.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 126.21 6.31 1.00 1 2 919.95782 1838.90837 -3.34 37.94 4275 4275 MS2 23/42 Linfeng_091611_rIgG_9.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 138.12 6.27 1.00 1 2 919.95856 1838.90984 -2.54 37.91 4041 4041 MS2 23/42 Linfeng_091611_rIgG_10.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 109.27 6.22 1.00 1 3 825.39978 2474.18479 -3.22 34.20 4010 4010 MS2 26/96 Linfeng_091611_rIgG_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR IPI:IPI00021304.1 1 1 CID 93.62 6.21 1.00 1 3 1016.83588 3048.49308 -0.42 42.03 4811 4811 MS2 30/104 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 106.21 6.20 1.00 1 4 605.31854 2418.25234 0.47 54.58 6405 6405 MS2 43/120 Linfeng_091811_SIN3A_6.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 113.93 6.18 1.00 1 2 1237.59680 2474.18633 -2.60 33.72 3856 3856 MS2 24/48 Linfeng_091811_SIN3A_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 116.55 6.16 1.00 1 2 871.37769 1741.74809 -0.26 18.35 1393 1393 MS2 19/44 Linfeng_091611_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 73.33 6.15 1.00 1 3 825.40070 2474.18753 -2.11 33.43 3710 3710 MS2 27/96 Linfeng_091611_rIgG_2.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 46.96 6.15 1.00 1 3 538.62000 1613.84543 -2.46 35.96 4110 4110 MS2 29/52 Linfeng_091611_rIgG_7.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 19.41 6.13 1.00 1 3 581.25244 1741.74277 -3.32 18.86 1853 1853 MS2 33/88 Linfeng_091811_SIN3A_4.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 121.20 6.10 1.00 1 2 1072.47314 2143.93901 -2.74 29.82 6194 6194 MS2 22/34 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 139.38 6.09 1.00 1 4 605.31946 2418.25600 1.99 54.60 6284 6284 MS2 43/120 Linfeng_091811_SIN3A_9.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 92.80 6.08 1.00 1 2 919.96014 1838.91301 -0.82 36.75 8276 8276 MS2 18/42 Linfeng_081211_IgG_10.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 98.01 6.06 1.00 1 2 794.84448 1588.68169 -1.12 14.48 1300 1300 MS2 21/38 Linfeng_091611_rIgG_4.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 127.45 6.05 1.00 1 2 871.37720 1741.74712 -0.82 18.57 1696 1696 MS2 19/44 Linfeng_091611_rIgG_9.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 147.24 6.04 1.00 1 3 1022.16528 3064.48130 -2.61 39.73 4682 4682 MS2 32/104 Linfeng_091611_rIgG_5.raw High NKLNDLEEALQQAK 1 0 CID 65.91 6.04 1.00 1 3 538.61951 1613.84397 -3.37 36.17 4150 4150 MS2 29/52 Linfeng_091811_SIN3A_2.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 76.52 6.04 1.00 1 3 1016.83337 3048.48557 -2.89 42.25 4780 4780 MS2 35/104 Linfeng_091811_SIN3A_10.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 300.00 6.04 1.00 1 4 1023.77191 4092.06582 -1.72 44.70 5452 5452 MS2 49/258 Linfeng_091611_rIgG_8.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 90.63 6.03 1.00 1 3 733.38403 2198.13755 -1.69 42.48 4858 4858 MS2 30/72 Linfeng_091611_rIgG_9.raw High NKLNDLEEALQQAK 1 0 CID 66.77 6.03 1.00 1 3 538.61835 1613.84049 -5.52 35.93 4148 4148 MS2 28/52 Linfeng_091811_SIN3A_1.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 131.35 6.03 1.00 1 2 871.37549 1741.74370 -2.79 18.87 1848 1848 MS2 22/44 Linfeng_091811_SIN3A_6.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 122.50 6.00 1.00 1 3 733.38385 2198.13700 -1.94 42.49 4948 4948 MS2 32/72 Linfeng_091611_rIgG_7.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 92.48 6.00 1.00 1 3 825.40088 2474.18808 -1.89 37.75 5594 5594 MS2 30/96 Linfeng_081211_IgG_1.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 116.18 5.99 1.00 1 2 1237.59680 2474.18633 -2.60 37.97 5638 5638 MS2 23/48 Linfeng_081211_IgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 112.64 5.98 1.00 1 2 871.37769 1741.74809 -0.26 17.91 1513 1513 MS2 16/44 Linfeng_091811_SIN3A_10.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 53.95 5.97 1.00 1 3 538.61957 1613.84415 -3.25 35.85 4007 4007 MS2 28/52 Linfeng_091611_rIgG_9.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 141.42 5.96 1.00 1 3 1022.16589 3064.48313 -2.01 39.62 4097 4097 MS2 35/104 Linfeng_091611_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 105.91 5.95 1.00 1 2 919.96167 1838.91606 0.84 36.82 8230 8230 MS2 18/42 Linfeng_081211_IgG_4.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 132.52 5.95 1.00 1 2 919.95923 1838.91118 -1.81 44.05 7382 7382 MS2 22/42 Linfeng_081211_IgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 116.91 5.94 1.00 1 2 871.37762 1741.74797 -0.33 19.08 2829 2829 MS2 22/44 Linfeng_081211_IgG_8.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 108.89 5.91 1.00 1 4 1023.77283 4092.06948 -0.82 44.79 5381 5381 MS2 41/258 Linfeng_091611_rIgG_4.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 139.55 5.91 1.00 1 2 871.37579 1741.74431 -2.43 19.66 2754 2754 MS2 23/44 Linfeng_081211_IgG_5.raw High NKLNDLEEALQQAK 1 0 CID 50.20 5.90 1.00 1 3 538.61932 1613.84342 -3.71 36.23 4217 4217 MS2 28/52 Linfeng_091811_SIN3A_4.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 69.06 5.86 1.00 1 3 825.40234 2474.19248 -0.11 33.39 7253 7253 MS2 25/96 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 102.49 5.86 1.00 1 4 605.31946 2418.25600 1.99 54.41 6376 6376 MS2 41/120 Linfeng_091611_rIgG_1.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 142.73 5.86 1.00 1 2 660.79346 1320.57964 -2.48 21.92 2169 2169 MS2 28/30 Linfeng_091611_rIgG_1.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 47.19 5.86 1.00 1 3 538.61957 1613.84415 -3.25 35.89 4025 4025 MS2 28/52 Linfeng_091611_rIgG_2.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 56.37 5.84 1.00 1 3 752.68427 2256.03824 -2.97 35.08 3907 3907 MS2 25/72 Linfeng_091611_rIgG_9.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 122.45 5.82 1.00 1 2 871.37628 1741.74529 -1.87 18.62 1965 1965 MS2 20/44 Linfeng_091611_rIgG_8.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 146.12 5.80 1.00 1 2 660.79327 1320.57927 -2.76 21.95 2163 2163 MS2 28/30 Linfeng_091611_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 108.51 5.80 1.00 1 2 871.37524 1741.74321 -3.07 18.88 1872 1872 MS2 20/44 Linfeng_091611_rIgG_6.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 145.40 5.80 1.00 1 3 1022.16620 3064.48404 -1.71 39.54 9121 9121 MS2 33/104 Linfeng_081211_IgG_4.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR 1 0 CID M7(Oxidation) 154.77 5.79 1.00 1 4 869.45740 3474.80776 -3.63 48.27 5526 5526 MS2 41/168 Linfeng_091811_SIN3A_10.raw High HGGGGGGFGGGGFGSR 1 0 CID 144.11 5.79 1.00 1 2 660.79303 1320.57878 -3.13 22.14 2244 2244 MS2 25/30 Linfeng_091811_SIN3A_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 93.20 5.78 1.00 1 4 766.87726 3064.48720 -0.68 39.58 9130 9130 MS2 29/156 Linfeng_081211_IgG_4.raw High NKLNDLEEALQQAKEDLAR 1 0 CID 119.16 5.77 1.00 1 3 733.38306 2198.13462 -3.02 42.86 4857 4857 MS2 32/72 Linfeng_091811_SIN3A_10.raw High VDLLNQEIEFLK 1 0 CID 49.10 5.76 1.00 1 3 487.60300 1460.79444 -3.53 44.23 5030 5030 MS2 30/44 Linfeng_091811_SIN3A_10.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 80.18 5.76 1.00 1 3 758.01221 2272.02207 -7.83 26.74 2827 2827 MS2 26/72 Linfeng_091611_rIgG_1.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 113.06 5.76 1.00 1 3 715.31769 2143.93851 -2.98 29.71 2840 2840 MS2 27/68 Linfeng_091611_rIgG_3.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 103.27 5.74 1.00 1 3 752.68390 2256.03714 -3.46 35.16 3931 3931 MS2 25/72 Linfeng_091611_rIgG_2.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 101.88 5.73 1.00 1 3 752.68329 2256.03531 -4.27 35.30 4218 4218 MS2 27/72 Linfeng_091811_SIN3A_5.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 300.00 5.73 1.00 1 4 869.46045 3474.81997 -0.12 47.95 5552 5552 MS2 42/168 Linfeng_091611_rIgG_2.raw High HGGGGGGFGGGGFGSR 1 0 CID 135.93 5.72 1.00 1 2 660.79315 1320.57903 -2.94 22.19 2431 2431 MS2 27/30 Linfeng_091811_SIN3A_5.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 159.55 5.72 1.00 1 4 869.45862 3474.81264 -2.23 47.80 5128 5128 MS2 45/168 Linfeng_091611_rIgG_3.raw High NKLNDLEEALQQAK 1 0 CID 55.30 5.72 1.00 1 3 538.61957 1613.84415 -3.25 36.00 4167 4167 MS2 29/52 Linfeng_091811_SIN3A_3.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 31.89 5.72 1.00 1 3 581.25311 1741.74479 -2.16 18.61 1702 1702 MS2 29/88 Linfeng_091611_rIgG_9.raw High GGSSSGGGYGSGGGGSSSVK 1 0 CID 78.41 5.72 1.00 1 2 794.84485 1588.68242 -0.66 14.43 1339 1339 MS2 22/38 Linfeng_091811_SIN3A_5.raw High HGGGGGGFGGGGFGSR 1 0 CID 130.89 5.72 1.00 1 2 660.79340 1320.57952 -2.57 22.28 2335 2335 MS2 24/30 Linfeng_091811_SIN3A_4.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 84.00 5.70 1.00 1 3 825.40369 2474.19651 1.52 33.34 7243 7243 MS2 26/96 Linfeng_081211_IgG_6.raw High HGGGGGGFGGGGFGSR 1 0 CID 88.92 5.70 1.00 1 2 660.79321 1320.57915 -2.85 22.31 2332 2332 MS2 26/30 Linfeng_091811_SIN3A_6.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 99.62 5.70 1.00 1 2 871.37665 1741.74602 -1.45 18.12 1606 1606 MS2 21/44 Linfeng_091811_SIN3A_8.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 57.08 5.70 1.00 1 3 487.60318 1460.79499 -3.15 43.88 5073 5073 MS2 30/44 Linfeng_091611_rIgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 40.14 5.69 1.00 1 3 581.25507 1741.75064 1.20 19.50 2710 2710 MS2 32/88 Linfeng_081211_IgG_4.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 116.98 5.69 1.00 1 2 1237.59802 2474.18877 -1.61 33.20 7128 7128 MS2 25/48 Linfeng_081211_IgG_4.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 62.92 5.69 1.00 1 3 758.01465 2272.02939 -4.61 26.78 2837 2837 MS2 24/72 Linfeng_091611_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 39.81 5.68 1.00 1 3 581.25281 1741.74387 -2.69 18.60 1793 1793 MS2 37/88 Linfeng_091811_SIN3A_1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 118.88 5.68 1.00 1 3 1022.16693 3064.48624 -0.99 40.25 9558 9558 MS2 29/104 Linfeng_081211_IgG_7.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 55.00 5.67 1.00 1 3 464.56503 1391.68055 0.26 20.23 2996 2996 MS2 28/44 Linfeng_081211_IgG_3.raw High HGGGGGGFGGGGFGSR 1 0 CID 140.00 5.66 1.00 1 2 660.79327 1320.57927 -2.76 21.91 2257 2257 MS2 27/30 Linfeng_091811_SIN3A_1.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 122.48 5.66 1.00 1 2 1072.47559 2143.94390 -0.47 30.20 6177 6177 MS2 25/34 Linfeng_081211_IgG_6.raw High NKLNDLEEALQQAKEDLAR 1 0 CID 77.86 5.65 1.00 1 4 550.28931 2198.13540 -2.67 42.85 4856 4856 MS2 38/108 Linfeng_091811_SIN3A_10.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 91.57 5.65 1.00 1 3 752.68378 2256.03678 -3.62 35.41 4048 4048 MS2 24/72 Linfeng_091811_SIN3A_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 139.72 5.65 1.00 1 4 1023.77319 4092.07094 -0.47 45.00 5502 5502 MS2 41/258 Linfeng_091811_SIN3A_5.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 97.21 5.65 1.00 1 3 752.68396 2256.03733 -3.38 35.10 3998 3998 MS2 26/72 Linfeng_091611_rIgG_7.raw High HGGGGGGFGGGGFGSR 1 0 CID 300.00 5.64 1.00 1 2 660.79309 1320.57891 -3.03 22.17 2290 2290 MS2 26/30 Linfeng_091811_SIN3A_3.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 138.08 5.64 1.00 1 2 660.79120 1320.57512 -5.90 21.96 2437 2437 MS2 25/30 Linfeng_091611_rIgG_8.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 58.29 5.64 1.00 1 3 752.68439 2256.03861 -2.81 35.27 4069 4069 MS2 27/72 Linfeng_091811_SIN3A_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 117.19 5.64 1.00 1 4 1023.77252 4092.06826 -1.12 44.79 5319 5319 MS2 43/258 Linfeng_091611_rIgG_6.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 71.60 5.63 1.00 1 3 733.38513 2198.14084 -0.19 42.59 5042 5042 MS2 25/72 Linfeng_091611_rIgG_6.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 47.49 5.63 1.00 1 3 538.62128 1613.84928 -0.08 36.83 8575 8575 MS2 29/52 Linfeng_081211_IgG_8.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 114.52 5.63 1.00 1 3 1022.17072 3064.49759 2.71 48.42 8639 8639 MS2 30/104 Linfeng_081211_IgG_1.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 40.57 5.62 1.00 1 3 581.25311 1741.74479 -2.16 19.22 2868 2868 MS2 31/88 Linfeng_081211_IgG_6.raw High SKEEAEALYHSK 1 0 CID 65.79 5.62 1.00 1 3 464.56207 1391.67167 -6.12 18.26 1876 1876 MS2 27/44 Linfeng_091811_SIN3A_5.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 103.08 5.61 1.00 1 2 871.37799 1741.74870 0.09 20.31 3027 3027 MS2 19/44 Linfeng_081211_IgG_3.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 126.03 5.60 1.00 1 4 869.46136 3474.82363 0.94 47.79 5844 5844 MS2 37/168 Linfeng_091611_rIgG_8.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 126.97 5.60 1.00 1 2 871.37640 1741.74553 -1.73 18.06 1524 1524 MS2 21/44 Linfeng_091811_SIN3A_7.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 51.09 5.59 1.00 1 3 538.61914 1613.84287 -4.05 35.81 4017 4017 MS2 28/52 Linfeng_091611_rIgG_1.raw High VDLLNQEIEFLK 1 0 CID 50.46 5.57 1.00 1 3 487.60345 1460.79581 -2.59 44.12 5176 5176 MS2 28/44 Linfeng_091811_SIN3A_2.raw High GGSGGGGSISGGGYGSGGGSGGR 1 0 CID 106.51 5.57 1.00 1 2 871.37726 1741.74724 -0.75 18.77 1750 1750 MS2 20/44 Linfeng_091811_SIN3A_9.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 144.11 5.56 1.00 1 2 660.79346 1320.57964 -2.48 21.97 2354 2354 MS2 25/30 Linfeng_091611_rIgG_4.raw High VDLLNQEIEFLK 1 0 CID 46.68 5.55 1.00 1 3 487.60358 1460.79618 -2.34 44.08 5205 5205 MS2 28/44 Linfeng_091811_SIN3A_3.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 46.88 5.55 1.00 1 3 581.25446 1741.74881 0.15 19.15 2851 2851 MS2 32/88 Linfeng_081211_IgG_8.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 81.62 5.54 1.00 1 2 794.84473 1588.68218 -0.81 14.61 1388 1388 MS2 23/38 Linfeng_091611_rIgG_8.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 58.91 5.54 1.00 1 3 538.62122 1613.84909 -0.19 36.27 8057 8057 MS2 28/52 Linfeng_081211_IgG_4.raw High HGGGGGGFGGGGFGSR 1 0 CID 65.62 5.54 1.00 1 3 440.86441 1320.57868 -3.21 22.25 2332 2332 MS2 30/60 Linfeng_091811_SIN3A_4.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 29.50 5.54 1.00 1 3 581.25397 1741.74735 -0.69 18.46 1690 1690 MS2 32/88 Linfeng_091611_rIgG_1.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 141.76 5.54 1.00 1 2 870.85541 1740.70354 -1.20 17.60 1569 1569 MS2 26/38 Linfeng_091611_rIgG_1.raw High HGGGGGGFGGGGFGSR 1 0 CID 67.06 5.53 1.00 1 3 440.86411 1320.57776 -3.90 22.11 2281 2281 MS2 30/60 Linfeng_091811_SIN3A_3.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 108.76 5.53 1.00 1 2 919.96051 1838.91374 -0.42 36.85 8242 8242 MS2 21/42 Linfeng_081211_IgG_4.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 107.01 5.53 1.00 1 3 758.01318 2272.02500 -6.54 26.83 2837 2837 MS2 24/72 Linfeng_091611_rIgG_9.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 131.13 5.51 1.00 1 2 660.79419 1320.58110 -1.37 21.95 2243 2243 MS2 25/30 Linfeng_091611_rIgG_7.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 72.58 5.51 1.00 1 3 715.31793 2143.93924 -2.64 35.23 5101 5101 MS2 26/68 Linfeng_081211_IgG_1.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 104.15 5.50 1.00 1 2 794.84436 1588.68144 -1.27 12.65 978 978 MS2 20/38 Linfeng_091611_rIgG_1.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 73.15 5.50 1.00 1 3 715.31915 2143.94291 -0.93 30.10 6080 6080 MS2 28/68 Linfeng_081211_IgG_4.raw High WELLQQmNVGTRPINLEPIFQGYIDSLK IPI:IPI00021304.1 1 1 CID M7(Oxidation) 104.57 5.50 1.00 1 4 830.43481 3318.71743 -0.55 50.06 5408 5408 MS2 39/162 Linfeng_091611_rIgG_3.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 72.53 5.49 1.00 1 3 440.86444 1320.57877 -3.14 21.89 2155 2155 MS2 30/60 Linfeng_091611_rIgG_2.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 35.88 5.49 1.00 1 3 538.62036 1613.84653 -1.78 35.93 3626 3626 MS2 28/52 Linfeng_091611_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 102.00 5.48 1.00 1 3 825.40167 2474.19046 -0.93 38.82 5879 5879 MS2 29/96 Linfeng_081211_IgG_1.raw High SKEEAEALYHSK 1 0 CID 33.41 5.48 1.00 1 3 464.56357 1391.67615 -2.90 18.12 1719 1719 MS2 27/44 Linfeng_091811_SIN3A_3.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 61.50 5.47 1.00 1 2 871.37842 1741.74956 0.58 19.42 2684 2684 MS2 17/44 Linfeng_081211_IgG_4.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 137.50 5.47 1.00 1 2 870.85596 1740.70464 -0.57 17.54 1549 1549 MS2 24/38 Linfeng_091611_rIgG_2.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 69.03 5.47 1.00 1 2 794.84521 1588.68315 -0.19 14.46 1204 1204 MS2 21/38 Linfeng_091611_rIgG_7.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 46.15 5.47 1.00 1 3 464.56354 1391.67606 -2.96 18.26 1784 1784 MS2 28/44 Linfeng_091611_rIgG_6.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 56.55 5.46 1.00 1 3 440.86520 1320.58106 -1.40 23.02 3996 3996 MS2 29/60 Linfeng_081211_IgG_10.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 63.73 5.45 1.00 1 3 464.56323 1391.67514 -3.62 17.88 1597 1597 MS2 27/44 Linfeng_091611_rIgG_2.raw High SKEEAEALYHSKYEELQVTVGR 1 0 CID 67.95 5.45 1.00 1 4 642.32275 2566.26919 -3.61 30.79 3495 3495 MS2 33/126 Linfeng_091811_SIN3A_6.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 96.84 5.44 1.00 1 2 794.84265 1588.67803 -3.42 15.73 1816 1816 MS2 19/38 Linfeng_081211_IgG_6.raw High NKLNDLEEALQQAKEDLAR 1 0 CID 106.65 5.44 1.00 1 3 733.38257 2198.13315 -3.69 42.70 4996 4996 MS2 29/72 Linfeng_091811_SIN3A_2.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 133.34 5.44 1.00 1 2 870.85529 1740.70329 -1.34 17.65 1660 1660 MS2 25/38 Linfeng_091811_SIN3A_1.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 133.08 5.44 1.00 1 4 869.46002 3474.81826 -0.61 47.97 5535 5535 MS2 40/168 Linfeng_091611_rIgG_9.raw High GGSSSGGGYGSGGGGSSSVK 1 0 CID 88.86 5.43 1.00 1 2 794.84613 1588.68498 0.96 13.15 1114 1114 MS2 19/38 Linfeng_091811_SIN3A_4.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 26.95 5.43 1.00 1 3 457.90698 1371.70639 -3.72 35.09 4124 4124 MS2 28/44 Linfeng_091611_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 52.96 5.42 1.00 1 3 613.64081 1838.90787 -3.61 39.16 4038 4038 MS2 33/84 Linfeng_091611_rIgG_3.raw High LNDLEEALQQAK 1 0 CID 75.07 5.42 1.00 1 2 686.35626 1371.70525 -4.56 35.32 4220 4220 MS2 20/22 Linfeng_091811_SIN3A_5.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 61.04 5.42 1.00 1 3 752.68384 2256.03696 -3.54 35.26 4090 4090 MS2 25/72 Linfeng_091611_rIgG_6.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 58.19 5.41 1.00 1 3 487.60382 1460.79691 -1.84 43.94 5053 5053 MS2 28/44 Linfeng_091611_rIgG_2.raw High LNDLEEALQQAK 1 0 CID 76.95 5.41 1.00 1 2 686.35651 1371.70574 -4.20 35.12 4041 4041 MS2 20/22 Linfeng_091811_SIN3A_1.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 60.91 5.41 1.00 1 3 440.86484 1320.57996 -2.24 21.91 2164 2164 MS2 30/60 Linfeng_091611_rIgG_9.raw High LNDLEEALQQAK 1 0 CID 70.94 5.41 1.00 1 2 686.35742 1371.70757 -2.87 35.28 4071 4071 MS2 20/22 Linfeng_091811_SIN3A_3.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 20.46 5.40 1.00 1 3 613.64264 1838.91336 -0.62 36.88 8252 8252 MS2 26/84 Linfeng_081211_IgG_4.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 66.11 5.40 1.00 1 3 440.86554 1320.58207 -0.64 21.92 1968 1968 MS2 31/60 Linfeng_091611_rIgG_10.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 67.82 5.40 1.00 1 3 715.31909 2143.94272 -1.01 29.98 6113 6113 MS2 27/68 Linfeng_081211_IgG_6.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 143.21 5.40 1.00 1 2 660.79327 1320.57927 -2.76 23.30 3816 3816 MS2 27/30 Linfeng_081211_IgG_5.raw High LNDLEEALQQAK 1 0 CID 32.78 5.39 1.00 1 3 457.90662 1371.70530 -4.52 35.15 4045 4045 MS2 28/44 Linfeng_091811_SIN3A_1.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 50.89 5.39 1.00 1 3 944.40137 2831.18955 -1.70 40.04 9488 9488 MS2 26/140 Linfeng_081211_IgG_7.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 62.61 5.39 1.00 1 3 440.86429 1320.57831 -3.48 24.01 4331 4331 MS2 30/60 Linfeng_081211_IgG_3.raw High LNDLEEALQQAK 1 0 CID 26.82 5.38 1.00 1 3 457.90710 1371.70676 -3.46 35.44 4052 4052 MS2 27/44 Linfeng_091811_SIN3A_2.raw High NKLNDLEEALQQAK 1 0 CID 61.85 5.38 1.00 1 3 538.61853 1613.84104 -5.18 36.13 3995 3995 MS2 29/52 Linfeng_091811_SIN3A_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 74.54 5.38 1.00 1 2 686.35754 1371.70781 -2.69 34.99 3896 3896 MS2 19/22 Linfeng_091611_rIgG_9.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 49.07 5.37 1.00 1 3 464.56522 1391.68109 0.66 19.27 2637 2637 MS2 27/44 Linfeng_081211_IgG_4.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 143.21 5.37 1.00 1 2 660.79449 1320.58171 -0.91 22.11 2319 2319 MS2 24/30 Linfeng_091611_rIgG_6.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 61.03 5.37 1.00 1 2 686.35883 1371.71037 -0.82 35.06 7790 7790 MS2 19/22 Linfeng_081211_IgG_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 69.59 5.37 1.00 1 2 686.35858 1371.70989 -1.18 35.21 7790 7790 MS2 19/22 Linfeng_081211_IgG_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 73.48 5.36 1.00 1 2 686.35681 1371.70635 -3.76 35.05 4119 4119 MS2 20/22 Linfeng_091611_rIgG_4.raw High HGGGGGGFGGGGFGSR 1 0 CID 121.38 5.35 1.00 1 2 660.79315 1320.57903 -2.94 22.27 2239 2239 MS2 24/30 Linfeng_091811_SIN3A_9.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 85.90 5.34 1.00 1 2 686.35864 1371.71001 -1.09 35.48 7998 7998 MS2 20/22 Linfeng_081211_IgG_7.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 66.78 5.34 1.00 1 2 627.80652 1254.60576 -1.28 23.23 4139 4139 MS2 19/26 Linfeng_081211_IgG_8.raw High SKEEAEALYHSK 1 0 CID 39.49 5.33 1.00 1 3 464.56403 1391.67752 -1.91 15.57 1260 1260 MS2 26/44 Linfeng_091811_SIN3A_10.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 85.07 5.33 1.00 1 2 1237.59985 2474.19243 -0.13 39.13 5946 5946 MS2 20/48 Linfeng_081211_IgG_1.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 132.95 5.33 1.00 1 2 1072.47583 2143.94438 -0.24 30.18 6009 6009 MS2 19/34 Linfeng_081211_IgG_5.raw High LNDLEEALQQAK 1 0 CID 82.85 5.33 1.00 1 2 686.35712 1371.70696 -3.31 35.41 4047 4047 MS2 20/22 Linfeng_091811_SIN3A_2.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 49.40 5.33 1.00 1 3 440.86465 1320.57941 -2.65 23.29 3815 3815 MS2 30/60 Linfeng_081211_IgG_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 73.44 5.33 1.00 1 2 686.35858 1371.70989 -1.18 34.96 8030 8030 MS2 20/22 Linfeng_081211_IgG_8.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 66.81 5.31 1.00 1 3 440.86499 1320.58042 -1.89 22.67 3980 3980 MS2 29/60 Linfeng_081211_IgG_8.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 61.35 5.31 1.00 1 2 686.35858 1371.70989 -1.18 35.37 7961 7961 MS2 19/22 Linfeng_081211_IgG_6.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 130.31 5.31 1.00 1 4 1023.77344 4092.07192 -0.23 45.07 5329 5329 MS2 43/258 Linfeng_091811_SIN3A_6.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 49.86 5.31 1.00 1 3 487.60388 1460.79709 -1.71 43.94 5042 5042 MS2 28/44 Linfeng_091611_rIgG_9.raw High HGGGGGGFGGGGFGSR 1 0 CID 121.75 5.31 1.00 1 2 660.79333 1320.57939 -2.66 22.04 2092 2092 MS2 26/30 Linfeng_091811_SIN3A_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 24.81 5.31 1.00 1 3 457.90710 1371.70676 -3.46 35.20 3936 3936 MS2 28/44 Linfeng_091611_rIgG_2.raw High LNDLEEALQQAK 1 0 CID 59.86 5.31 1.00 1 2 686.35706 1371.70683 -3.40 35.39 4107 4107 MS2 19/22 Linfeng_091811_SIN3A_4.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 114.63 5.30 1.00 1 3 758.01129 2272.01932 -9.04 26.89 2944 2944 MS2 26/72 Linfeng_091811_SIN3A_1.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 132.96 5.30 1.00 1 2 660.79425 1320.58122 -1.28 21.98 2173 2173 MS2 24/30 Linfeng_091611_rIgG_9.raw High LNDLEEALQQAK 1 0 CID 51.80 5.30 1.00 1 2 686.35663 1371.70598 -4.02 35.45 4099 4099 MS2 19/22 Linfeng_091811_SIN3A_6.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 55.07 5.30 1.00 1 3 464.56497 1391.68036 0.13 23.63 3861 3861 MS2 25/44 Linfeng_081211_IgG_2.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 52.44 5.29 1.00 1 3 715.31958 2143.94419 -0.33 30.89 6596 6596 MS2 24/68 Linfeng_081211_IgG_3.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 132.84 5.29 1.00 1 2 870.85486 1740.70244 -1.83 18.02 1750 1750 MS2 26/38 Linfeng_091611_rIgG_6.raw High SKEEAEALYHSK 1 0 CID 54.77 5.29 1.00 1 3 464.56332 1391.67542 -3.42 17.80 1646 1646 MS2 28/44 Linfeng_091811_SIN3A_2.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 74.67 5.28 1.00 1 2 794.84717 1588.68706 2.26 14.66 1176 1176 MS2 19/38 Linfeng_091611_rIgG_9.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 121.27 5.28 1.00 1 2 870.85522 1740.70317 -1.41 17.81 1677 1677 MS2 26/38 Linfeng_091811_SIN3A_3.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 17.74 5.28 1.00 1 3 825.40045 2474.18680 -2.41 35.27 7928 7928 MS2 23/96 Linfeng_081211_IgG_6.raw High HGGGGGGFGGGGFGSR 1 0 CID 70.45 5.28 1.00 1 3 440.86432 1320.57840 -3.41 22.19 2316 2316 MS2 30/60 Linfeng_091811_SIN3A_6.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 52.39 5.28 1.00 1 2 686.35852 1371.70976 -1.27 35.21 7770 7770 MS2 19/22 Linfeng_081211_IgG_4.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 119.73 5.28 1.00 1 4 1023.77295 4092.06997 -0.70 44.68 5224 5224 MS2 48/258 Linfeng_091611_rIgG_7.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 64.50 5.28 1.00 1 3 752.68365 2256.03641 -3.79 35.46 3909 3909 MS2 28/72 Linfeng_091811_SIN3A_10.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 68.26 5.28 1.00 1 3 825.40320 2474.19504 0.92 34.09 7791 7791 MS2 25/96 Linfeng_081211_IgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 54.47 5.27 1.00 1 3 487.60342 1460.79572 -2.65 43.95 5275 5275 MS2 29/44 Linfeng_091611_rIgG_4.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 101.95 5.27 1.00 1 3 758.01257 2272.02317 -7.35 26.96 2962 2962 MS2 28/72 Linfeng_091811_SIN3A_3.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 141.76 5.26 1.00 1 2 870.85443 1740.70159 -2.32 17.98 1727 1727 MS2 28/38 Linfeng_091811_SIN3A_4.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 135.04 5.26 1.00 1 2 870.85706 1740.70683 0.69 18.88 2555 2555 MS2 22/38 Linfeng_081211_IgG_7.raw High VDLLNQEIEFLK 1 0 CID 51.51 5.26 1.00 1 3 487.60339 1460.79563 -2.71 44.12 5206 5206 MS2 29/44 Linfeng_091811_SIN3A_1.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 55.18 5.26 1.00 1 3 715.32043 2143.94675 0.86 31.24 6105 6105 MS2 27/68 Linfeng_081211_IgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 30.91 5.26 1.00 1 3 825.39966 2474.18442 -3.37 33.88 3900 3900 MS2 23/96 Linfeng_091811_SIN3A_6.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 61.86 5.26 1.00 1 3 440.86530 1320.58133 -1.20 23.16 3911 3911 MS2 30/60 Linfeng_081211_IgG_4.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 82.52 5.26 1.00 1 2 627.80597 1254.60466 -2.16 28.03 3720 3720 MS2 22/26 Linfeng_081211_IgG_1.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 91.99 5.25 1.00 1 2 870.85724 1740.70720 0.90 16.26 1309 1309 MS2 20/38 Linfeng_091811_SIN3A_7.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 55.73 5.25 1.00 1 2 686.35730 1371.70732 -3.05 35.01 3508 3508 MS2 19/22 Linfeng_091611_rIgG_3.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 94.52 5.25 1.00 1 3 758.01160 2272.02024 -8.64 26.84 3031 3031 MS2 25/72 Linfeng_091611_rIgG_4.raw High GGSSSGGGYGSGGGGSSSVK 1 0 CID 44.94 5.25 1.00 1 2 794.84460 1588.68193 -0.96 14.30 1196 1196 MS2 16/38 Linfeng_091811_SIN3A_1.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 107.30 5.24 1.00 1 3 758.01233 2272.02243 -7.67 27.31 3021 3021 MS2 27/72 Linfeng_091811_SIN3A_6.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 140.80 5.24 1.00 1 2 870.85492 1740.70256 -1.76 17.98 1723 1723 MS2 27/38 Linfeng_091811_SIN3A_6.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 62.13 5.24 1.00 1 2 627.80676 1254.60625 -0.89 27.03 3561 3561 MS2 22/26 Linfeng_081211_IgG_1.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 88.57 5.23 1.00 1 4 1023.77264 4092.06875 -1.00 44.71 5324 5324 MS2 48/258 Linfeng_091611_rIgG_5.raw High HGGGGGGFGGGGFGSR 1 0 CID 65.48 5.23 1.00 1 3 440.86429 1320.57831 -3.48 21.95 2079 2079 MS2 29/60 Linfeng_091811_SIN3A_10.raw High TSQNSELNNmQDLVEDYK 1 0 CID M10(Oxidation) 81.49 5.23 1.00 1 3 715.31836 2143.94052 -2.04 30.01 3380 3380 MS2 29/68 Linfeng_091811_SIN3A_3.raw High VLYDAEISQIHQSVTDTNVILSMDNSR IPI:IPI00021304.1 1 1 CID 60.07 5.22 1.00 1 3 1016.83447 3048.48886 -1.81 41.87 4384 4384 MS2 30/104 Linfeng_091611_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 300.00 5.21 1.00 1 4 1023.77228 4092.06728 -1.36 45.12 5143 5143 MS2 45/258 Linfeng_091811_SIN3A_10.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 68.87 5.21 1.00 1 2 794.84381 1588.68035 -1.96 15.69 1786 1786 MS2 21/38 Linfeng_081211_IgG_8.raw High LNDLEEALQQAK 1 0 CID 27.52 5.21 1.00 1 3 457.90707 1371.70667 -3.52 35.44 4113 4113 MS2 28/44 Linfeng_091811_SIN3A_4.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 96.15 5.21 1.00 1 3 758.01324 2272.02518 -6.46 27.13 2798 2798 MS2 28/72 Linfeng_091811_SIN3A_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 83.62 5.21 1.00 1 2 686.35638 1371.70549 -4.38 34.99 3907 3907 MS2 20/22 Linfeng_091611_rIgG_1.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 115.42 5.20 1.00 1 2 870.85315 1740.69902 -3.80 17.88 1630 1630 MS2 22/38 Linfeng_091811_SIN3A_9.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 46.59 5.20 1.00 1 2 807.42908 1613.85088 0.91 36.33 8074 8074 MS2 21/26 Linfeng_081211_IgG_4.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 71.91 5.19 1.00 1 2 686.35974 1371.71221 0.51 36.60 7628 7628 MS2 20/22 Linfeng_081211_IgG_2.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 43.67 5.18 1.00 1 3 538.61993 1613.84525 -2.57 35.95 3793 3793 MS2 28/52 Linfeng_091611_rIgG_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 89.84 5.17 1.00 1 2 686.35718 1371.70708 -3.22 35.06 3918 3918 MS2 20/22 Linfeng_091611_rIgG_2.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 64.67 5.16 1.00 1 3 440.86517 1320.58097 -1.47 25.32 4757 4757 MS2 27/60 Linfeng_081211_IgG_3.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 45.64 5.15 1.00 1 3 464.56363 1391.67633 -2.76 18.06 1695 1695 MS2 28/44 Linfeng_091611_rIgG_7.raw High SKEEAEALYHSK 1 0 CID 37.44 5.15 1.00 1 3 464.56317 1391.67496 -3.75 17.96 1703 1703 MS2 26/44 Linfeng_091811_SIN3A_1.raw High WELLQQmNVGTRPINLEPIFQGYIDSLK 1 0 CID M7(Oxidation) 82.42 5.14 1.00 1 4 830.43561 3318.72060 0.41 50.45 5999 5999 MS2 33/162 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 63.88 5.14 1.00 1 2 738.39508 1475.78288 -1.65 38.00 5645 5645 MS2 19/22 Linfeng_081211_IgG_1.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 57.65 5.12 1.00 1 3 440.86441 1320.57868 -3.21 22.89 4004 4004 MS2 29/60 Linfeng_081211_IgG_6.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 106.37 5.12 1.00 1 2 1072.47339 2143.93950 -2.52 30.14 6097 6097 MS2 23/34 Linfeng_081211_IgG_4.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 42.55 5.11 1.00 1 3 581.25458 1741.74918 0.36 20.58 2904 2904 MS2 31/88 Linfeng_081211_IgG_2.raw High VDLLNQEIEFLK 1 0 CID 50.60 5.11 1.00 1 3 487.60361 1460.79627 -2.27 44.40 5027 5027 MS2 26/44 Linfeng_091811_SIN3A_7.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 73.16 5.11 1.00 1 3 752.68408 2256.03769 -3.22 35.04 3512 3512 MS2 28/72 Linfeng_091611_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 159.55 5.11 1.00 1 5 819.21802 4092.06098 -2.90 44.71 4744 4744 MS2 45/344 Linfeng_091611_rIgG_3.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 97.55 5.10 1.00 1 3 752.68329 2256.03531 -4.27 35.06 4121 4121 MS2 30/72 Linfeng_091611_rIgG_4.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 64.36 5.09 1.00 1 3 758.01355 2272.02610 -6.06 27.19 3019 3019 MS2 25/72 Linfeng_091611_rIgG_6.raw High GGSISGGGYGSGGGK 1 0 CID 55.33 5.09 1.00 1 2 599.27692 1197.54656 -2.48 17.23 1623 1623 MS2 21/28 Linfeng_091811_SIN3A_4.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 126.19 5.09 1.00 1 2 870.85577 1740.70427 -0.78 17.78 1655 1655 MS2 27/38 Linfeng_091611_rIgG_7.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 133.25 5.09 1.00 1 2 870.85486 1740.70244 -1.83 17.81 1847 1847 MS2 25/38 Linfeng_091611_rIgG_8.raw High VDLLNQEIEFLK 1 0 CID 37.81 5.08 1.00 1 3 487.60132 1460.78940 -6.98 44.27 5409 5409 MS2 24/44 Linfeng_091811_SIN3A_5.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 25.23 5.08 1.00 1 3 464.56339 1391.67560 -3.29 19.12 2788 2788 MS2 23/44 Linfeng_081211_IgG_10.raw High NKLNDLEEALQQAKEDLAR 1 0 CID 38.25 5.08 1.00 1 3 733.38373 2198.13663 -2.11 42.98 4967 4967 MS2 24/72 Linfeng_091811_SIN3A_9.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 139.96 5.08 1.00 1 4 1023.77148 4092.06411 -2.14 45.15 5183 5183 MS2 46/258 Linfeng_091811_SIN3A_8.raw High NKLNDLEEALQQAKEDLAR IPI:IPI00021304.1 1 1 CID 101.60 5.07 1.00 1 3 733.38293 2198.13425 -3.19 42.48 4894 4894 MS2 27/72 Linfeng_091611_rIgG_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 55.53 5.07 1.00 1 3 464.56219 1391.67203 -5.86 18.07 1884 1884 MS2 24/44 Linfeng_091611_rIgG_8.raw High SKEEAEALYHSKYEELQVTVGR 1 0 CID 20.85 5.07 1.00 1 4 642.32190 2566.26577 -4.95 30.86 3310 3310 MS2 30/126 Linfeng_091811_SIN3A_10.raw High VDLLNQEIEFLK 1 0 CID 60.34 5.07 1.00 1 3 487.60336 1460.79554 -2.78 44.20 5244 5244 MS2 28/44 Linfeng_091811_SIN3A_4.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 66.54 5.07 1.00 1 3 440.86530 1320.58133 -1.20 44.24 7447 7447 MS2 27/60 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 38.15 5.06 1.00 1 2 738.39508 1475.78288 -1.65 29.10 5752 5752 MS2 18/22 Linfeng_081211_IgG_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 118.78 5.06 1.00 1 3 1022.16455 3064.47910 -3.32 40.03 4690 4690 MS2 30/104 Linfeng_091811_SIN3A_6.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 59.31 5.06 1.00 1 3 464.56348 1391.67588 -3.09 18.80 2741 2741 MS2 26/44 Linfeng_081211_IgG_8.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 61.32 5.06 1.00 1 2 794.84338 1588.67949 -2.50 16.24 1778 1778 MS2 20/38 Linfeng_081211_IgG_5.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 131.85 5.05 1.00 1 2 870.85370 1740.70012 -3.17 17.97 1834 1834 MS2 27/38 Linfeng_091811_SIN3A_5.raw High SKEEAEALYHSK 1 0 CID 28.73 5.05 1.00 1 3 464.56345 1391.67578 -3.16 18.21 1754 1754 MS2 26/44 Linfeng_091811_SIN3A_6.raw High LNDLEEALQQAK 1 0 CID 61.35 5.04 1.00 1 2 686.35663 1371.70598 -4.02 35.51 3915 3915 MS2 19/22 Linfeng_091811_SIN3A_10.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 75.78 5.04 1.00 1 2 686.35938 1371.71147 -0.02 36.01 8507 8507 MS2 20/22 Linfeng_081211_IgG_3.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 74.04 5.03 1.00 1 2 627.80713 1254.60698 -0.31 29.04 3905 3905 MS2 22/26 Linfeng_081211_IgG_1.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 46.12 5.03 1.00 1 3 440.86359 1320.57621 -5.08 21.93 2433 2433 MS2 29/60 Linfeng_091611_rIgG_8.raw High NKLNDLEEALQQAK 1 0 CID 89.77 5.03 1.00 1 2 807.42432 1613.84136 -4.99 36.04 4162 4162 MS2 22/26 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 37.52 5.02 1.00 1 2 738.39545 1475.78362 -1.15 35.98 5238 5238 MS2 19/22 Linfeng_081211_IgG_1.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 62.45 5.02 1.00 1 2 807.42767 1613.84807 -0.82 36.85 8580 8580 MS2 19/26 Linfeng_081211_IgG_8.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 86.67 5.02 1.00 1 2 871.37848 1741.74968 0.65 18.52 1533 1533 MS2 19/44 Linfeng_091611_rIgG_10.raw High HGGGGGGFGGGGFGSR 1 0 CID 65.19 5.02 1.00 1 3 440.86426 1320.57822 -3.55 21.82 2244 2244 MS2 29/60 Linfeng_091811_SIN3A_1.raw High SKEEAEALYHSKYEELQVTVGR IPI:IPI00021304.1 1 1 CID 28.83 5.01 1.00 1 4 642.32367 2566.27285 -2.19 30.53 3113 3113 MS2 32/126 Linfeng_091611_rIgG_10.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 117.78 5.01 1.00 1 2 871.37933 1741.75139 1.63 22.47 2598 2598 MS2 21/44 Linfeng_081211_IgG_1.raw High NKLNDLEEALQQAK 1 0 CID 49.21 5.01 1.00 1 2 807.42389 1613.84050 -5.51 36.24 4010 4010 MS2 20/26 Linfeng_091811_SIN3A_10.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 47.80 5.00 1.00 1 3 440.86450 1320.57895 -3.00 21.82 2155 2155 MS2 30/60 Linfeng_091611_rIgG_1.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 105.29 5.00 1.00 1 4 869.46021 3474.81899 -0.40 48.01 5781 5781 MS2 39/168 Linfeng_091611_rIgG_4.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 80.09 4.99 1.00 1 3 440.86475 1320.57969 -2.44 23.28 3940 3940 MS2 29/60 Linfeng_081211_IgG_7.raw High GFSSGSAVVSGGSR 1 0 CID 84.97 4.99 1.00 1 2 627.80518 1254.60307 -3.42 22.90 2424 2424 MS2 22/26 Linfeng_091811_SIN3A_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR IPI:IPI00021304.1 1 1 CID 47.03 4.99 1.00 1 3 1016.83386 3048.48703 -2.41 41.99 4829 4829 MS2 27/104 Linfeng_091611_rIgG_1.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 70.65 4.98 1.00 1 2 627.80530 1254.60332 -3.23 22.57 2259 2259 MS2 23/26 Linfeng_091611_rIgG_1.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 74.47 4.98 1.00 1 2 730.90143 1460.79558 -2.75 43.81 5065 5065 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 136.18 4.98 1.00 1 3 806.75684 2418.25595 1.97 54.37 6371 6371 MS2 35/80 Linfeng_091611_rIgG_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 46.05 4.98 1.00 1 3 464.56366 1391.67643 -2.70 18.00 1617 1617 MS2 25/44 Linfeng_091611_rIgG_9.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 109.54 4.97 1.00 1 2 871.37830 1741.74932 0.44 21.45 2346 2346 MS2 17/44 Linfeng_081211_IgG_1.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 100.61 4.97 1.00 1 3 758.01318 2272.02500 -6.54 27.09 3112 3112 MS2 27/72 Linfeng_091811_SIN3A_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 54.49 4.97 1.00 1 2 686.35724 1371.70720 -3.14 35.29 4094 4094 MS2 17/22 Linfeng_091611_rIgG_6.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR IPI:IPI00021304.1 1 1 CID M7(Oxidation) 86.58 4.97 1.00 1 4 869.45782 3474.80947 -3.14 48.01 5736 5736 MS2 37/168 Linfeng_091611_rIgG_5.raw High VDLLNQEIEFLK 1 0 CID 71.92 4.97 1.00 1 2 730.90039 1460.79350 -4.17 44.13 5391 5391 MS2 19/22 Linfeng_091811_SIN3A_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 32.69 4.97 1.00 1 3 457.90836 1371.71051 -0.72 35.51 8009 8009 MS2 27/44 Linfeng_081211_IgG_7.raw High HGGGGGGFGGGGFGSR 1 0 CID 45.00 4.97 1.00 1 3 440.86420 1320.57804 -3.69 22.15 2426 2426 MS2 30/60 Linfeng_091811_SIN3A_5.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 83.58 4.96 1.00 1 2 660.79437 1320.58147 -1.09 21.89 1808 1808 MS2 18/30 Linfeng_091611_rIgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 49.56 4.96 1.00 1 3 487.60339 1460.79563 -2.71 43.87 4638 4638 MS2 29/44 Linfeng_091611_rIgG_3.raw High VDLLNQEIEFLK 1 0 CID 69.54 4.96 1.00 1 2 730.90173 1460.79619 -2.33 44.06 5169 5169 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 60.22 4.96 1.00 1 2 738.39459 1475.78191 -2.31 28.57 5645 5645 MS2 19/22 Linfeng_081211_IgG_10.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 81.41 4.96 1.00 1 2 627.80591 1254.60454 -2.26 22.67 2271 2271 MS2 23/26 Linfeng_091611_rIgG_9.raw High mSGDLSSNVTVSVTSSTISSNVASK 2 0 CID M1(Oxidation) 19.32 4.95 1.00 1 3 825.39874 2474.18167 -4.48 33.78 4017 4017 MS2 23/96 Linfeng_091811_SIN3A_5.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 53.12 4.95 1.00 1 3 758.01630 2272.03434 -2.43 26.79 2462 2462 MS2 25/72 Linfeng_091611_rIgG_3.raw High VDLLNQEIEFLK 1 0 CID 57.87 4.95 1.00 1 3 487.60358 1460.79618 -2.34 44.35 5239 5239 MS2 22/44 Linfeng_091811_SIN3A_6.raw High LLRDYQELMNVK IPI:IPI00021304.1 5 1 CID 39.78 4.94 1.00 1 3 507.93976 1521.80472 -3.10 33.33 3688 3688 MS2 22/44 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.00 4.94 1.00 1 2 738.39252 1475.77776 -5.13 28.21 3086 3086 MS2 19/22 Linfeng_091811_SIN3A_2.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 62.51 4.94 1.00 1 3 440.86490 1320.58014 -2.10 22.00 2304 2304 MS2 29/60 Linfeng_091611_rIgG_6.raw High GGSSSGGGYGSGGGGSSSVK 1 0 CID 35.07 4.93 1.00 1 2 794.84247 1588.67766 -3.65 1.50 214 214 MS2 14/38 Linfeng_091811_SIN3A_2.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 20.65 4.93 1.00 1 3 464.56424 1391.67817 -1.45 18.90 2762 2762 MS2 26/44 Linfeng_081211_IgG_6.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 61.73 4.93 1.00 1 3 440.86612 1320.58380 0.68 26.32 4709 4709 MS2 25/60 Linfeng_081211_IgG_2.raw High VDLLNQEIEFLK 1 0 CID 74.61 4.93 1.00 1 2 730.90125 1460.79521 -3.00 44.31 5078 5078 MS2 18/22 Linfeng_091811_SIN3A_8.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 154.77 4.93 1.00 1 4 1023.77405 4092.07436 0.37 44.99 5347 5347 MS2 42/258 Linfeng_091811_SIN3A_4.raw High GFSSGSAVVSGGSR 1 0 CID 83.27 4.93 1.00 1 2 627.80499 1254.60271 -3.72 22.79 2180 2180 MS2 23/26 Linfeng_091811_SIN3A_7.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.01 4.93 1.00 1 2 738.39386 1475.78044 -3.31 28.25 3269 3269 MS2 19/22 Linfeng_091811_SIN3A_5.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 69.84 4.92 1.00 1 2 665.32172 1329.63616 -2.44 29.20 2773 2773 MS2 19/22 Linfeng_091611_rIgG_3.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 32.30 4.92 1.00 1 3 464.56354 1391.67606 -2.96 17.86 1605 1605 MS2 26/44 Linfeng_091611_rIgG_1.raw High VDLLNQEIEFLK 1 0 CID 67.61 4.92 1.00 1 2 730.90198 1460.79668 -1.99 44.01 5196 5196 MS2 19/22 Linfeng_091811_SIN3A_3.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 84.19 4.92 1.00 1 2 627.80566 1254.60405 -2.65 22.72 2545 2545 MS2 22/26 Linfeng_091611_rIgG_8.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 40.29 4.91 1.00 1 3 464.56305 1391.67459 -4.01 17.88 1781 1781 MS2 25/44 Linfeng_091611_rIgG_4.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 107.41 4.91 1.00 1 2 871.37683 1741.74639 -1.24 19.13 2843 2843 MS2 18/44 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.89 4.91 1.00 1 2 738.39429 1475.78130 -2.73 28.02 3096 3096 MS2 19/22 Linfeng_091811_SIN3A_1.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 106.56 4.91 1.00 1 2 870.85608 1740.70488 -0.43 18.28 2580 2580 MS2 21/38 Linfeng_081211_IgG_8.raw High HGGGGGGFGGGGFGSR 1 0 CID 69.24 4.91 1.00 1 3 440.86398 1320.57740 -4.18 21.98 2067 2067 MS2 28/60 Linfeng_091811_SIN3A_7.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 63.90 4.90 1.00 1 2 730.90295 1460.79863 -0.66 43.82 10229 10229 MS2 18/22 Linfeng_081211_IgG_5.raw High HGGGGGGFGGGGFGSR 1 0 CID 66.60 4.90 1.00 1 3 440.86377 1320.57676 -4.66 22.07 2159 2159 MS2 30/60 Linfeng_091811_SIN3A_8.raw High HGGGGGGFGGGGFGSR 1 0 CID 45.69 4.90 1.00 1 3 440.86389 1320.57712 -4.38 22.04 2230 2230 MS2 30/60 Linfeng_091811_SIN3A_2.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 72.66 4.90 1.00 1 2 730.90179 1460.79631 -2.24 43.85 5262 5262 MS2 19/22 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 57.95 4.89 1.00 1 2 738.39478 1475.78227 -2.06 28.11 3169 3169 MS2 19/22 Linfeng_091611_rIgG_5.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 74.61 4.89 1.00 1 3 440.86475 1320.57969 -2.44 21.89 2234 2234 MS2 28/60 Linfeng_091611_rIgG_7.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 66.73 4.89 1.00 1 2 627.80750 1254.60771 0.27 23.80 4082 4082 MS2 21/26 Linfeng_081211_IgG_7.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 59.44 4.89 1.00 1 3 440.86435 1320.57849 -3.34 21.84 2336 2336 MS2 30/60 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.55 4.88 1.00 1 2 738.39478 1475.78227 -2.06 28.15 3124 3124 MS2 19/22 Linfeng_091811_SIN3A_3.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 46.14 4.88 1.00 1 2 627.80750 1254.60771 0.27 24.79 4208 4208 MS2 15/26 Linfeng_081211_IgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.26 4.88 1.00 1 2 738.39459 1475.78191 -2.31 29.97 6257 6257 MS2 18/22 Linfeng_081211_IgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 85.22 4.88 1.00 1 2 730.90167 1460.79607 -2.41 43.83 4633 4633 MS2 19/22 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 58.76 4.87 1.00 1 2 738.39398 1475.78069 -3.14 28.72 3018 3018 MS2 19/22 Linfeng_091811_SIN3A_10.raw High GGSISGGGYGSGGGK 1 0 CID 62.69 4.87 1.00 1 2 599.27692 1197.54656 -2.48 16.96 1565 1565 MS2 22/28 Linfeng_091811_SIN3A_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 64.03 4.86 1.00 1 2 696.34296 1391.67864 -1.11 17.94 1617 1617 MS2 19/22 Linfeng_091611_rIgG_1.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 84.96 4.86 1.00 1 2 807.42401 1613.84075 -5.36 35.89 4012 4012 MS2 22/26 Linfeng_091611_rIgG_9.raw High SKEEAEALYHSK 1 0 CID 64.74 4.86 1.00 1 2 696.34100 1391.67473 -3.92 18.32 1884 1884 MS2 19/22 Linfeng_091811_SIN3A_5.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 75.18 4.86 1.00 1 2 730.90192 1460.79656 -2.08 44.00 5221 5221 MS2 19/22 Linfeng_091611_rIgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 65.30 4.86 1.00 1 2 738.39569 1475.78411 -0.82 28.31 5686 5686 MS2 19/22 Linfeng_081211_IgG_8.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 31.37 4.86 1.00 1 3 457.90732 1371.70740 -2.99 35.15 3915 3915 MS2 27/44 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 55.59 4.86 1.00 1 2 738.39386 1475.78044 -3.31 28.25 2927 2927 MS2 19/22 Linfeng_091811_SIN3A_7.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 83.27 4.86 1.00 1 2 627.80713 1254.60698 -0.31 23.51 4143 4143 MS2 20/26 Linfeng_081211_IgG_10.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 72.33 4.86 1.00 1 2 627.80560 1254.60393 -2.74 22.80 2414 2414 MS2 22/26 Linfeng_091611_rIgG_6.raw High SKEEAEALYHSK 1 0 CID 31.47 4.85 1.00 1 3 464.56265 1391.67340 -4.87 16.58 1363 1363 MS2 23/44 Linfeng_091811_SIN3A_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.18 4.85 1.00 1 2 738.39447 1475.78166 -2.48 27.97 2989 2989 MS2 19/22 Linfeng_091611_rIgG_1.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 136.54 4.84 1.00 1 2 870.85437 1740.70146 -2.39 17.44 1598 1598 MS2 25/38 Linfeng_091811_SIN3A_2.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 81.70 4.84 1.00 1 2 627.80487 1254.60246 -3.91 22.70 2440 2440 MS2 22/26 Linfeng_091611_rIgG_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 59.27 4.84 1.00 1 2 738.39368 1475.78008 -3.55 28.23 3165 3165 MS2 19/22 Linfeng_091811_SIN3A_4.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 98.41 4.84 1.00 1 2 599.27765 1197.54802 -1.25 16.98 1542 1542 MS2 20/28 Linfeng_091611_rIgG_7.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 144.92 4.84 1.00 1 4 1023.77429 4092.07534 0.61 44.71 5139 5139 MS2 42/258 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.27 4.84 1.00 1 2 738.39581 1475.78435 -0.66 32.20 5244 5244 MS2 20/22 Linfeng_081211_IgG_9.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 71.03 4.84 1.00 1 2 730.90240 1460.79753 -1.41 43.88 5124 5124 MS2 19/22 Linfeng_091611_rIgG_7.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 64.32 4.84 1.00 1 2 599.27698 1197.54668 -2.37 17.11 1747 1747 MS2 22/28 Linfeng_091611_rIgG_8.raw High NVQDAIADAEQR 1 0 CID 68.81 4.84 1.00 1 2 665.32117 1329.63506 -3.27 29.46 3256 3256 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 60.35 4.84 1.00 1 2 738.39471 1475.78215 -2.15 28.20 3156 3156 MS2 19/22 Linfeng_091611_rIgG_6.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 44.35 4.84 1.00 1 3 487.60394 1460.79728 -1.59 43.95 5133 5133 MS2 28/44 Linfeng_091611_rIgG_7.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.34 4.83 1.00 1 2 738.39417 1475.78105 -2.89 28.28 3155 3155 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 74.14 4.82 1.00 1 2 665.32117 1329.63506 -3.27 29.19 3351 3351 MS2 19/22 Linfeng_091611_rIgG_4.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 127.24 4.82 1.00 1 2 870.85718 1740.70708 0.83 17.72 1578 1578 MS2 24/38 Linfeng_091611_rIgG_9.raw High VDLLNQEIEFLK 1 0 CID 73.32 4.82 1.00 1 2 730.90204 1460.79680 -1.91 44.26 5228 5228 MS2 20/22 Linfeng_091811_SIN3A_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 46.46 4.82 1.00 1 2 738.39392 1475.78057 -3.22 27.95 3181 3181 MS2 19/22 Linfeng_091611_rIgG_4.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 57.78 4.81 1.00 1 2 696.34137 1391.67546 -3.39 17.97 1793 1793 MS2 19/22 Linfeng_091611_rIgG_4.raw High VDLLNQEIEFLK 1 0 CID 72.18 4.81 1.00 1 2 730.90137 1460.79546 -2.83 44.21 5027 5027 MS2 19/22 Linfeng_091811_SIN3A_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 62.98 4.81 1.00 1 2 738.39532 1475.78337 -1.32 28.01 3072 3072 MS2 19/22 Linfeng_091611_rIgG_7.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 34.62 4.81 1.00 1 3 581.25391 1741.74717 -0.80 20.36 3047 3047 MS2 29/88 Linfeng_081211_IgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 74.85 4.80 1.00 1 2 730.90265 1460.79802 -1.07 43.88 5034 5034 MS2 19/22 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 62.76 4.80 1.00 1 2 738.39618 1475.78508 -0.16 34.27 7583 7583 MS2 18/22 Linfeng_081211_IgG_6.raw High NVQDAIADAEQR 1 0 CID 72.81 4.80 1.00 1 2 665.32129 1329.63530 -3.08 29.35 3277 3277 MS2 19/22 Linfeng_091811_SIN3A_1.raw High VDLLNQEIEFLK 1 0 CID 75.04 4.80 1.00 1 2 730.90234 1460.79741 -1.49 44.15 5238 5238 MS2 19/22 Linfeng_091811_SIN3A_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.78 4.80 1.00 1 2 738.39648 1475.78569 0.25 31.30 6119 6119 MS2 19/22 Linfeng_081211_IgG_2.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 86.97 4.80 1.00 1 2 627.80542 1254.60356 -3.04 22.69 2347 2347 MS2 22/26 Linfeng_091611_rIgG_7.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 80.22 4.79 1.00 1 2 730.90253 1460.79778 -1.24 43.86 5346 5346 MS2 18/22 Linfeng_091611_rIgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 56.98 4.79 1.00 1 2 738.39423 1475.78118 -2.81 28.04 3003 3003 MS2 19/22 Linfeng_091611_rIgG_2.raw High NVQDAIADAEQR 1 0 CID 64.03 4.79 1.00 1 2 665.32092 1329.63457 -3.63 29.51 3441 3441 MS2 19/22 Linfeng_091811_SIN3A_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 61.67 4.79 1.00 1 2 738.39471 1475.78215 -2.15 28.02 2995 2995 MS2 19/22 Linfeng_091611_rIgG_9.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK IPI:IPI00021304.1 1 1 CID 300.00 4.79 1.00 1 4 1023.77191 4092.06582 -1.72 44.59 4729 4729 MS2 47/258 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 65.63 4.78 1.00 1 2 738.39240 1475.77751 -5.29 28.26 2955 2955 MS2 19/22 Linfeng_091811_SIN3A_10.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 42.78 4.78 1.00 1 3 825.40198 2474.19138 -0.56 34.43 7628 7628 MS2 22/96 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 146.12 4.77 1.00 1 3 806.75592 2418.25321 0.83 54.58 6282 6282 MS2 34/80 Linfeng_091811_SIN3A_9.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 72.47 4.77 1.00 1 2 730.90192 1460.79656 -2.08 43.97 4810 4810 MS2 19/22 Linfeng_091611_rIgG_10.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 72.77 4.76 1.00 1 2 599.27832 1197.54936 -0.13 19.18 2643 2643 MS2 17/28 Linfeng_081211_IgG_3.raw High GFSSGSAVVSGGSR 1 0 CID 77.25 4.76 1.00 1 2 627.80554 1254.60381 -2.84 22.97 2426 2426 MS2 23/26 Linfeng_091811_SIN3A_6.raw High VDLLNQEIEFLK 1 0 CID 56.06 4.76 1.00 1 2 730.90265 1460.79802 -1.07 44.30 5133 5133 MS2 18/22 Linfeng_091811_SIN3A_9.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 44.96 4.76 1.00 1 3 538.62030 1613.84635 -1.89 36.86 8427 8427 MS2 23/52 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00021304.1 9 1 CID 135.04 4.76 1.00 1 3 806.75714 2418.25687 2.34 54.43 6475 6475 MS2 27/80 Linfeng_091611_rIgG_6.raw High GFSSGSAVVSGGSR 1 0 CID 86.02 4.76 1.00 1 2 627.80499 1254.60271 -3.72 22.84 2341 2341 MS2 22/26 Linfeng_091811_SIN3A_2.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 84.19 4.76 1.00 1 3 580.90558 1740.70218 -1.98 17.68 1580 1580 MS2 31/76 Linfeng_091611_rIgG_1.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 78.44 4.75 1.00 1 2 627.80469 1254.60210 -4.20 22.62 2445 2445 MS2 22/26 Linfeng_091611_rIgG_4.raw High GFSSGSAVVSGGSR 1 0 CID 92.22 4.75 1.00 1 2 627.80579 1254.60430 -2.45 22.75 2193 2193 MS2 22/26 Linfeng_091811_SIN3A_10.raw High VDLLNQEIEFLK 1 0 CID 74.64 4.75 1.00 1 2 730.90204 1460.79680 -1.91 44.32 5017 5017 MS2 19/22 Linfeng_091811_SIN3A_7.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 51.98 4.75 1.00 1 3 752.68402 2256.03751 -3.30 35.50 4106 4106 MS2 28/72 Linfeng_091811_SIN3A_6.raw High WELLQQmNVGTRPINLEPIFQGYIDSLKR 1 0 CID M7(Oxidation) 110.57 4.75 1.00 1 4 869.45972 3474.81704 -0.96 48.00 5697 5697 MS2 40/168 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 46.52 4.75 1.00 1 2 738.39612 1475.78496 -0.25 28.81 5633 5633 MS2 19/22 Linfeng_081211_IgG_7.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 76.74 4.74 1.00 1 2 730.90234 1460.79741 -1.49 43.89 5046 5046 MS2 19/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.57 4.74 1.00 1 2 738.39581 1475.78435 -0.66 30.63 5926 5926 MS2 19/22 Linfeng_081211_IgG_2.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 51.06 4.74 1.00 1 2 627.80774 1254.60820 0.66 24.91 3886 3886 MS2 14/26 Linfeng_081211_IgG_9.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 97.06 4.74 1.00 1 3 758.01215 2272.02188 -7.91 26.97 2934 2934 MS2 26/72 Linfeng_091611_rIgG_7.raw High GSSSGGGYSSGSSSYGSGGR 3 0 CID 128.87 4.74 1.00 1 2 870.85297 1740.69866 -4.01 2.04 299 299 MS2 25/38 Linfeng_091811_SIN3A_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 61.92 4.73 1.00 1 2 738.39539 1475.78349 -1.24 28.83 5516 5516 MS2 19/22 Linfeng_081211_IgG_5.raw High SKEEAEALYHSK 1 0 CID 60.52 4.73 1.00 1 2 696.34137 1391.67546 -3.39 18.03 1713 1713 MS2 19/22 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.03 4.73 1.00 1 2 738.39471 1475.78215 -2.15 27.95 2612 2612 MS2 19/22 Linfeng_091611_rIgG_3.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 94.74 4.73 1.00 1 3 758.01703 2272.03653 -1.47 27.17 5143 5143 MS2 25/72 Linfeng_081211_IgG_4.raw High GFSSGSAVVSGGSR 1 0 CID 91.52 4.73 1.00 1 2 627.80481 1254.60234 -4.01 22.85 2267 2267 MS2 22/26 Linfeng_091811_SIN3A_8.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 74.10 4.73 1.00 1 2 665.32220 1329.63713 -1.71 36.29 5303 5303 MS2 19/22 Linfeng_081211_IgG_1.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 25.46 4.72 1.00 1 3 457.90857 1371.71115 -0.25 36.04 8518 8518 MS2 26/44 Linfeng_081211_IgG_3.raw High RSTSSFScLSR IPI:IPI00021304.1 1 1 CID C8(Carbamidomethyl) 45.94 4.72 1.00 1 3 429.87500 1287.61045 -0.47 22.26 3847 3847 MS2 21/40 Linfeng_081211_IgG_8.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 85.72 4.72 1.00 1 2 730.90149 1460.79570 -2.66 43.94 5227 5227 MS2 18/22 Linfeng_091611_rIgG_5.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 77.11 4.71 1.00 1 2 807.42474 1613.84221 -4.46 36.00 4115 4115 MS2 18/26 Linfeng_091611_rIgG_7.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 66.30 4.71 1.00 1 2 665.32172 1329.63616 -2.44 29.16 3145 3145 MS2 19/22 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 69.10 4.71 1.00 1 2 738.39648 1475.78569 0.25 31.32 5073 5073 MS2 19/22 Linfeng_081211_IgG_9.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 29.93 4.71 1.00 1 2 599.27802 1197.54875 -0.64 17.08 1487 1487 MS2 16/28 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 57.71 4.70 1.00 1 2 738.39252 1475.77776 -5.13 28.26 3054 3054 MS2 20/22 Linfeng_091811_SIN3A_9.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 130.66 4.70 1.00 1 2 870.85413 1740.70098 -2.67 17.62 1744 1744 MS2 25/38 Linfeng_091611_rIgG_4.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 72.95 4.69 1.00 1 2 665.32245 1329.63762 -1.34 29.83 5875 5875 MS2 19/22 Linfeng_081211_IgG_5.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 68.62 4.69 1.00 1 2 665.32245 1329.63762 -1.34 29.65 5993 5993 MS2 19/22 Linfeng_081211_IgG_6.raw High SKEEAEALYHSK 1 0 CID 52.13 4.69 1.00 1 3 464.56351 1391.67597 -3.03 18.30 1773 1773 MS2 26/44 Linfeng_091811_SIN3A_4.raw High GGSISGGGYGSGGGK 1 0 CID 73.86 4.69 1.00 1 2 599.27759 1197.54790 -1.35 17.03 1568 1568 MS2 21/28 Linfeng_091811_SIN3A_3.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 77.59 4.68 1.00 1 2 627.80603 1254.60478 -2.06 22.67 2265 2265 MS2 22/26 Linfeng_091611_rIgG_2.raw High NVQDAIADAEQR 1 0 CID 64.25 4.68 1.00 1 2 665.32129 1329.63530 -3.08 29.60 3137 3137 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NVQDAIADAEQR 1 0 CID 66.74 4.68 1.00 1 2 665.32172 1329.63616 -2.44 29.40 3296 3296 MS2 19/22 Linfeng_091811_SIN3A_3.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 85.72 4.67 1.00 1 2 627.80634 1254.60539 -1.58 23.31 4117 4117 MS2 21/26 Linfeng_081211_IgG_6.raw High GGSISGGGYGSGGGK 1 0 CID 69.49 4.67 1.00 1 2 599.27673 1197.54619 -2.78 17.20 1726 1726 MS2 21/28 Linfeng_091811_SIN3A_5.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 61.36 4.67 1.00 1 2 730.90338 1460.79949 -0.07 43.95 10627 10627 MS2 18/22 Linfeng_081211_IgG_8.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 70.48 4.67 1.00 1 2 660.79486 1320.58245 -0.35 26.51 5002 5002 MS2 18/30 Linfeng_081211_IgG_4.raw High GFSSGSAVVSGGSR 1 0 CID 75.71 4.66 1.00 1 2 627.80548 1254.60369 -2.94 22.85 2386 2386 MS2 22/26 Linfeng_091811_SIN3A_3.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 66.76 4.66 1.00 1 2 599.27740 1197.54753 -1.66 16.89 1471 1471 MS2 21/28 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 61.92 4.66 1.00 1 2 738.39319 1475.77910 -4.22 28.37 3014 3014 MS2 19/22 Linfeng_091811_SIN3A_8.raw High GGSISGGGYGSGGGK 1 0 CID 89.06 4.66 1.00 1 2 599.27618 1197.54509 -3.70 1.95 286 286 MS2 21/28 Linfeng_091811_SIN3A_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 64.44 4.66 1.00 1 2 738.39435 1475.78142 -2.64 28.03 3273 3273 MS2 19/22 Linfeng_091611_rIgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 59.87 4.66 1.00 1 2 738.39441 1475.78154 -2.56 27.99 2781 2781 MS2 19/22 Linfeng_091611_rIgG_10.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 85.60 4.65 1.00 1 3 758.01642 2272.03470 -2.27 27.40 5259 5259 MS2 19/72 Linfeng_081211_IgG_6.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 65.15 4.65 1.00 1 3 440.86511 1320.58078 -1.61 21.80 1797 1797 MS2 29/60 Linfeng_091611_rIgG_3.raw High GFSSGSAVVSGGSR 1 0 CID 91.15 4.65 1.00 1 2 627.80414 1254.60100 -5.08 22.82 2518 2518 MS2 23/26 Linfeng_091811_SIN3A_5.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 73.50 4.65 1.00 1 2 665.32147 1329.63567 -2.81 29.31 3172 3172 MS2 19/22 Linfeng_091611_rIgG_2.raw High NVQDAIADAEQR 1 0 CID 61.68 4.65 1.00 1 2 665.32129 1329.63530 -3.08 29.59 3352 3352 MS2 19/22 Linfeng_091811_SIN3A_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 115.24 4.64 1.00 1 4 762.87598 3048.48208 -4.03 42.11 4920 4920 MS2 37/156 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 66.07 4.64 1.00 1 2 738.39502 1475.78276 -1.73 36.99 5443 5443 MS2 19/22 Linfeng_081211_IgG_1.raw High GFSSGSAVVSGGSR 1 0 CID 74.03 4.64 1.00 1 2 627.80591 1254.60454 -2.26 22.67 2364 2364 MS2 22/26 Linfeng_091811_SIN3A_1.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 48.21 4.62 1.00 1 3 443.88394 1329.63727 -1.60 29.79 6043 6043 MS2 23/44 Linfeng_081211_IgG_6.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 63.07 4.62 1.00 1 2 599.27679 1197.54631 -2.68 17.05 1664 1664 MS2 21/28 Linfeng_091611_rIgG_4.raw High HGGGGGGFGGGGFGSR 1 0 CID 81.80 4.62 1.00 1 3 440.86490 1320.58014 -2.10 22.20 2229 2229 MS2 29/60 Linfeng_091811_SIN3A_9.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 66.96 4.62 1.00 1 2 696.34314 1391.67900 -0.85 20.25 3005 3005 MS2 19/22 Linfeng_081211_IgG_3.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 65.54 4.61 1.00 1 3 440.86514 1320.58088 -1.54 23.94 4322 4322 MS2 28/60 Linfeng_081211_IgG_6.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 62.02 4.61 1.00 1 2 794.84601 1588.68474 0.80 16.77 1915 1915 MS2 19/38 Linfeng_081211_IgG_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 69.27 4.61 1.00 1 2 665.32178 1329.63628 -2.35 29.25 3158 3158 MS2 19/22 Linfeng_091611_rIgG_9.raw High GGSISGGGYGSGGGK 1 0 CID 48.72 4.61 1.00 1 2 599.27600 1197.54473 -4.00 2.20 319 319 MS2 18/28 Linfeng_091811_SIN3A_8.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 60.66 4.61 1.00 1 2 627.80725 1254.60723 -0.12 22.72 2075 2075 MS2 22/26 Linfeng_091611_rIgG_10.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 109.78 4.60 1.00 1 2 794.84644 1588.68559 1.34 16.16 1818 1818 MS2 17/38 Linfeng_081211_IgG_7.raw High WELLQQmNVGTRPINLEPIFQGYIDSLK IPI:IPI00021304.1 1 1 CID M7(Oxidation) 104.45 4.59 1.00 1 4 830.43597 3318.72207 0.85 50.05 5843 5843 MS2 35/162 Linfeng_091611_rIgG_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 54.75 4.59 1.00 1 2 696.34259 1391.67790 -1.64 17.95 1606 1606 MS2 18/22 Linfeng_091611_rIgG_2.raw High NVQDAIADAEQR 1 0 CID 74.64 4.58 1.00 1 3 443.88336 1329.63553 -2.91 29.41 3298 3298 MS2 28/44 Linfeng_091811_SIN3A_3.raw High VDLLNQEIEFLK 1 0 CID 80.22 4.58 1.00 1 2 730.90198 1460.79668 -1.99 44.04 5195 5195 MS2 19/22 Linfeng_091811_SIN3A_1.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 33.32 4.58 1.00 1 3 457.90857 1371.71115 -0.25 35.41 7974 7974 MS2 27/44 Linfeng_081211_IgG_6.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 38.26 4.58 1.00 1 3 464.56470 1391.67954 -0.46 19.37 2716 2716 MS2 23/44 Linfeng_081211_IgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.61 4.58 1.00 1 3 492.59863 1475.78135 -2.69 37.31 5515 5515 MS2 27/44 Linfeng_081211_IgG_1.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 38.34 4.58 1.00 1 3 580.90643 1740.70475 -0.51 18.41 2620 2620 MS2 27/76 Linfeng_081211_IgG_8.raw High SKEEAEALYHSK 1 0 CID 23.18 4.58 1.00 1 3 464.56375 1391.67670 -2.50 18.21 1673 1673 MS2 21/44 Linfeng_091811_SIN3A_9.raw High GGSSSGGGYGSGGGGSSSVK 1 0 CID 46.30 4.57 1.00 1 2 794.84607 1588.68486 0.88 13.38 1104 1104 MS2 17/38 Linfeng_091811_SIN3A_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 76.54 4.57 1.00 1 2 665.32300 1329.63872 -0.51 29.80 5984 5984 MS2 19/22 Linfeng_081211_IgG_7.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 46.03 4.56 1.00 1 3 443.88416 1329.63791 -1.12 29.89 5899 5899 MS2 26/44 Linfeng_081211_IgG_5.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 71.16 4.56 1.00 1 2 627.80609 1254.60491 -1.97 23.90 3693 3693 MS2 21/26 Linfeng_081211_IgG_9.raw High GGSISGGGYGSGGGK 1 0 CID 64.59 4.56 1.00 1 2 599.27704 1197.54680 -2.27 17.42 1644 1644 MS2 21/28 Linfeng_091811_SIN3A_6.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 24.59 4.55 1.00 1 3 443.88388 1329.63709 -1.74 29.45 6065 6065 MS2 23/44 Linfeng_081211_IgG_8.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 42.04 4.55 1.00 1 2 627.80774 1254.60820 0.66 26.02 3393 3393 MS2 16/26 Linfeng_081211_IgG_1.raw High NVQDAIADAEQR 1 0 CID 63.40 4.55 1.00 1 3 443.88312 1329.63480 -3.46 29.37 3281 3281 MS2 28/44 Linfeng_091811_SIN3A_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 87.65 4.55 1.00 1 2 696.34204 1391.67681 -2.43 18.10 1631 1631 MS2 17/22 Linfeng_091611_rIgG_9.raw High HGGGGGGFGGGGFGSR 1 0 CID 81.89 4.55 1.00 1 2 660.79242 1320.57756 -4.05 22.14 2168 2168 MS2 22/30 Linfeng_091811_SIN3A_8.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 94.99 4.55 1.00 1 2 627.80701 1254.60674 -0.51 24.44 4452 4452 MS2 20/26 Linfeng_081211_IgG_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 77.90 4.54 1.00 1 2 665.32300 1329.63872 -0.51 30.44 6440 6440 MS2 19/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.92 4.54 1.00 1 2 738.39655 1475.78581 0.33 34.19 7441 7441 MS2 19/22 Linfeng_081211_IgG_4.raw High GFSSGSAVVSGGSR 1 0 CID 92.01 4.54 1.00 1 2 627.80548 1254.60369 -2.94 22.97 2337 2337 MS2 23/26 Linfeng_091811_SIN3A_9.raw High NVQDAIADAEQR 1 0 CID 66.10 4.54 1.00 1 2 665.32129 1329.63530 -3.08 29.53 3102 3102 MS2 19/22 Linfeng_091811_SIN3A_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 66.80 4.54 1.00 1 2 665.36823 1329.72917 2.32 44.84 10931 10931 MS2 19/22 Linfeng_081211_IgG_10.raw High TSQNSELNNmQDLVEDYKK 1 0 CID M10(Oxidation) 81.50 4.53 1.00 1 3 758.01227 2272.02225 -7.75 27.09 2934 2934 MS2 26/72 Linfeng_091811_SIN3A_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 80.47 4.53 1.00 1 4 766.88025 3064.49917 3.22 48.49 8654 8654 MS2 31/156 Linfeng_081211_IgG_1.raw High GGSISGGGYGSGGGK 1 0 CID 75.88 4.53 1.00 1 2 599.27771 1197.54814 -1.15 16.30 1443 1443 MS2 22/28 Linfeng_091811_SIN3A_2.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 80.23 4.53 1.00 1 3 752.68762 2256.04831 1.49 35.10 7730 7730 MS2 21/72 Linfeng_081211_IgG_4.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 77.35 4.52 1.00 1 2 599.27783 1197.54839 -0.95 17.38 1663 1663 MS2 20/28 Linfeng_091611_rIgG_6.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 76.00 4.50 1.00 1 2 665.36646 1329.72563 -0.34 45.93 11125 11125 MS2 19/22 Linfeng_081211_IgG_8.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 83.51 4.50 1.00 1 2 665.32330 1329.63933 -0.05 23.95 4143 4143 MS2 19/22 Linfeng_081211_IgG_4.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 79.33 4.49 1.00 1 2 665.32306 1329.63884 -0.42 29.58 5978 5978 MS2 19/22 Linfeng_081211_IgG_10.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 55.00 4.49 1.00 1 2 696.34161 1391.67595 -3.04 18.84 2753 2753 MS2 19/22 Linfeng_081211_IgG_8.raw High SKEEAEALYHSK 1 0 CID 48.35 4.48 1.00 1 2 696.34247 1391.67766 -1.81 18.22 1733 1733 MS2 18/22 Linfeng_091811_SIN3A_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 69.72 4.48 1.00 1 2 665.32129 1329.63530 -3.08 29.33 3330 3330 MS2 19/22 Linfeng_091611_rIgG_5.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 76.64 4.47 1.00 1 2 599.27747 1197.54766 -1.56 16.85 1454 1454 MS2 22/28 Linfeng_091611_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR IPI:IPI00021304.1 1 1 CID 16.56 4.47 1.00 1 3 613.64227 1838.91227 -1.22 39.29 9360 9360 MS2 23/84 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.56 4.46 1.00 1 2 665.36548 1329.72368 -1.81 45.25 5205 5205 MS2 19/22 Linfeng_091611_rIgG_9.raw High NLDLDSIIAEVKAQYEEIAQR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 9 3 CID 300.00 4.46 1.00 1 3 806.75665 2418.25541 1.74 54.54 6680 6680 MS2 32/80 Linfeng_091811_SIN3A_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 25.62 4.45 1.00 1 3 457.90793 1371.70923 -1.65 35.00 8040 8040 MS2 26/44 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 53.96 4.45 1.00 1 2 665.36536 1329.72344 -2.00 45.78 5261 5261 MS2 19/22 Linfeng_091811_SIN3A_8.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 80.75 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.20 4806 4806 MS2 19/22 Linfeng_091611_rIgG_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 64.64 4.44 1.00 1 2 665.32397 1329.64067 0.96 30.73 5955 5955 MS2 19/22 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.35 4.44 1.00 1 2 665.36493 1329.72258 -2.64 45.35 4982 4982 MS2 19/22 Linfeng_091611_rIgG_10.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 159.55 4.44 1.00 1 4 1023.77258 4092.06850 -1.06 44.92 5277 5277 MS2 44/258 Linfeng_091811_SIN3A_2.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 102.49 4.44 1.00 1 2 870.85657 1740.70586 0.13 17.57 1303 1303 MS2 22/38 Linfeng_091611_rIgG_3.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 102.54 4.43 1.00 1 2 870.85504 1740.70281 -1.62 18.68 2669 2669 MS2 24/38 Linfeng_081211_IgG_10.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 107.32 4.43 1.00 1 4 1023.77429 4092.07534 0.61 44.84 5300 5300 MS2 37/258 Linfeng_091811_SIN3A_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 66.63 4.43 1.00 1 2 665.32239 1329.63750 -1.43 28.79 5825 5825 MS2 19/22 Linfeng_081211_IgG_8.raw High SKEEAEALYHSK 1 0 CID 58.06 4.42 1.00 1 2 696.34235 1391.67742 -1.99 17.95 1666 1666 MS2 18/22 Linfeng_091811_SIN3A_2.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 21.84 4.42 1.00 1 3 443.88437 1329.63855 -0.64 30.53 6472 6472 MS2 24/44 Linfeng_081211_IgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 40.13 4.42 1.00 1 3 487.60431 1460.79837 -0.83 44.00 10639 10639 MS2 26/44 Linfeng_081211_IgG_8.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 36.25 4.41 1.00 1 3 464.56427 1391.67826 -1.38 19.37 2654 2654 MS2 17/44 Linfeng_081211_IgG_5.raw High mSGDLSSNVTVSVTSSTISSNVASK IPI:IPI00021304.1 2 1 CID M1(Oxidation) 68.85 4.41 1.00 1 2 1237.60059 2474.19390 0.46 34.43 7927 7927 MS2 21/48 Linfeng_081211_IgG_3.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 66.84 4.41 1.00 1 2 730.90515 1460.80303 2.35 50.03 9049 9049 MS2 18/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 42.53 4.40 1.00 1 2 738.39606 1475.78484 -0.33 42.58 6951 6951 MS2 19/22 Linfeng_081211_IgG_1.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 45.56 4.40 1.00 1 2 599.27789 1197.54851 -0.84 17.97 2477 2477 MS2 22/28 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 73.68 4.40 1.00 1 2 665.36829 1329.72930 2.41 50.30 9118 9118 MS2 19/22 Linfeng_081211_IgG_1.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 80.10 4.39 1.00 1 2 599.27869 1197.55010 0.48 18.57 2450 2450 MS2 21/28 Linfeng_081211_IgG_7.raw High TSQNSELNNMQDLVEDYKK IPI:IPI00021304.1 1 1 CID 74.95 4.39 1.00 1 3 752.68591 2256.04319 -0.78 35.03 7724 7724 MS2 23/72 Linfeng_081211_IgG_5.raw High VLYDAEISQIHQSVTDTNVILSmDNSR 1 0 CID M23(Oxidation) 82.90 4.38 1.00 1 4 766.87561 3064.48061 -2.83 39.90 4672 4672 MS2 27/156 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.89 4.38 1.00 1 2 738.39496 1475.78264 -1.82 31.93 6979 6979 MS2 15/22 Linfeng_081211_IgG_3.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 67.73 4.37 1.00 1 2 665.32172 1329.63616 -2.44 29.31 3246 3246 MS2 19/22 Linfeng_091611_rIgG_7.raw High TSQNSELNNMQDLVEDYKK 1 0 CID 74.82 4.37 1.00 1 3 752.68292 2256.03421 -4.76 35.15 4044 4044 MS2 25/72 Linfeng_091811_SIN3A_1.raw High TSQNSELNNmQDLVEDYKK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 69.30 4.37 1.00 1 3 758.01678 2272.03580 -1.79 27.41 5040 5040 MS2 23/72 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 78.59 4.36 1.00 1 2 738.39624 1475.78520 -0.08 30.31 4878 4878 MS2 17/22 Linfeng_081211_IgG_9.raw High VLYDAEISQIHQSVTDTNVILSMDNSR 1 0 CID 55.97 4.36 1.00 1 4 762.87762 3048.48867 -1.87 42.14 4954 4954 MS2 32/156 Linfeng_091811_SIN3A_1.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 31.34 4.36 1.00 1 3 464.56558 1391.68219 1.45 46.12 8018 8018 MS2 23/44 Linfeng_081211_IgG_1.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 56.57 4.36 1.00 1 3 378.52576 1133.56272 0.64 19.84 2991 2991 MS2 22/32 Linfeng_081211_IgG_10.raw High NKLNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 39.29 4.35 1.00 1 3 538.62115 1613.84891 -0.30 39.92 9378 9378 MS2 23/52 Linfeng_081211_IgG_6.raw High NVQDAIADAEQR 1 0 CID 73.70 4.35 1.00 1 3 443.88281 1329.63388 -4.15 29.60 3453 3453 MS2 28/44 Linfeng_091811_SIN3A_5.raw High NVQDAIADAEQR 1 0 CID 70.49 4.35 1.00 1 2 665.32117 1329.63506 -3.27 29.58 3332 3332 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NVQDAIADAEQR 1 0 CID 59.76 4.34 1.00 1 3 443.88318 1329.63498 -3.32 29.60 3353 3353 MS2 27/44 Linfeng_091811_SIN3A_4.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 82.49 4.34 1.00 1 2 627.80652 1254.60576 -1.28 23.69 3944 3944 MS2 22/26 Linfeng_081211_IgG_5.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 49.12 4.33 1.00 1 2 794.84528 1588.68328 -0.12 3.61 358 358 MS2 21/38 Linfeng_091611_rIgG_2.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 82.68 4.33 1.00 1 2 665.32257 1329.63786 -1.16 32.03 5208 5208 MS2 19/22 Linfeng_081211_IgG_9.raw High NVQDAIADAEQR 1 0 CID 62.38 4.33 1.00 1 3 443.88293 1329.63425 -3.87 29.54 3267 3267 MS2 27/44 Linfeng_091811_SIN3A_2.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 61.03 4.33 1.00 1 2 730.90497 1460.80266 2.10 44.02 10779 10779 MS2 18/22 Linfeng_081211_IgG_7.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 32.94 4.33 1.00 1 3 443.91226 1329.72223 -2.90 45.59 5202 5202 MS2 28/44 Linfeng_091811_SIN3A_10.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK 1 0 CID 121.79 4.33 1.00 1 5 819.21838 4092.06281 -2.45 45.03 5324 5324 MS2 48/344 Linfeng_091811_SIN3A_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 40.94 4.33 1.00 1 2 665.36676 1329.72624 0.11 44.88 10517 10517 MS2 18/22 Linfeng_081211_IgG_5.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 68.48 4.32 1.00 1 2 665.32263 1329.63799 -1.06 35.27 5110 5110 MS2 18/22 Linfeng_081211_IgG_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 67.61 4.32 1.00 1 2 665.36633 1329.72539 -0.53 45.54 5420 5420 MS2 19/22 Linfeng_091811_SIN3A_4.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 37.17 4.32 1.00 1 2 597.31250 1193.61772 1.34 31.06 6045 6045 MS2 14/18 Linfeng_081211_IgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 75.34 4.32 1.00 1 2 665.36456 1329.72185 -3.19 45.22 5246 5246 MS2 19/22 Linfeng_091611_rIgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 72.09 4.31 1.00 1 2 665.36597 1329.72466 -1.08 45.26 5297 5297 MS2 19/22 Linfeng_091611_rIgG_7.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 49.17 4.31 1.00 1 2 665.36700 1329.72673 0.48 44.93 10883 10883 MS2 19/22 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.23 4.31 1.00 1 2 665.36487 1329.72246 -2.73 45.58 5200 5200 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 76.30 4.31 1.00 1 2 665.36481 1329.72234 -2.82 45.63 5398 5398 MS2 19/22 Linfeng_091811_SIN3A_6.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 53.76 4.30 1.00 1 2 665.36499 1329.72270 -2.55 45.14 5507 5507 MS2 19/22 Linfeng_091611_rIgG_8.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 24.76 4.30 1.00 1 3 457.90897 1371.71234 0.62 43.35 7164 7164 MS2 26/44 Linfeng_081211_IgG_1.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 66.64 4.30 1.00 1 2 665.36597 1329.72466 -1.08 45.35 5388 5388 MS2 19/22 Linfeng_091611_rIgG_6.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 66.09 4.29 1.00 1 2 599.27850 1197.54973 0.17 18.01 2483 2483 MS2 18/28 Linfeng_081211_IgG_6.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 73.00 4.29 1.00 1 2 665.36426 1329.72124 -3.65 45.51 5351 5351 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.62 4.28 1.00 1 3 492.59875 1475.78171 -2.45 28.17 3126 3126 MS2 25/44 Linfeng_091811_SIN3A_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 34.37 4.27 1.00 1 2 738.39459 1475.78191 -2.31 28.37 3238 3238 MS2 19/22 Linfeng_091611_rIgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 78.87 4.27 1.00 1 2 665.36456 1329.72185 -3.19 45.38 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_1.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 68.40 4.27 1.00 1 2 665.36505 1329.72283 -2.46 45.65 5298 5298 MS2 19/22 Linfeng_091811_SIN3A_9.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 82.30 4.27 1.00 1 2 665.32245 1329.63762 -1.34 29.03 5726 5726 MS2 18/22 Linfeng_081211_IgG_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR IPI:IPI00021304.1 1 1 CID M23(Oxidation) 96.02 4.26 1.00 1 4 766.87701 3064.48623 -1.00 40.24 9557 9557 MS2 31/156 Linfeng_081211_IgG_7.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 66.83 4.26 1.00 1 2 632.34790 1263.68852 -4.63 37.98 4233 4233 MS2 18/20 Linfeng_091811_SIN3A_10.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 78.46 4.25 1.00 1 2 665.36505 1329.72283 -2.46 45.32 5225 5225 MS2 19/22 Linfeng_091611_rIgG_2.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 74.25 4.24 1.00 1 2 665.36438 1329.72148 -3.47 45.30 5443 5443 MS2 19/22 Linfeng_091611_rIgG_4.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 72.75 4.23 1.00 1 2 665.36517 1329.72307 -2.27 45.44 5376 5376 MS2 19/22 Linfeng_091811_SIN3A_3.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 26.27 4.23 1.00 1 3 581.25470 1741.74955 0.57 19.75 2832 2832 MS2 26/88 Linfeng_081211_IgG_7.raw High YGSGGGSKGGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 30.80 4.22 1.00 1 3 630.95728 1890.85727 -0.25 18.42 2624 2624 MS2 23/88 Linfeng_081211_IgG_8.raw High NLDLDSIIAEVK IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 14 3 CID 75.78 4.22 1.00 1 2 665.36475 1329.72222 -2.91 45.54 5570 5570 MS2 19/22 Linfeng_091811_SIN3A_5.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 44.81 4.20 1.00 1 2 665.36853 1329.72978 2.78 45.69 11138 11138 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.87 4.19 1.00 1 2 738.39661 1475.78594 0.42 26.20 4887 4887 MS2 17/22 Linfeng_081211_IgG_4.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 26.81 4.19 1.00 1 3 464.56549 1391.68192 1.25 21.85 3572 3572 MS2 24/44 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00021304.1 14 1 CID 77.51 4.19 1.00 1 2 665.36493 1329.72258 -2.64 45.24 5388 5388 MS2 19/22 Linfeng_091611_rIgG_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 26.28 4.19 1.00 1 3 457.90866 1371.71143 -0.05 35.19 7766 7766 MS2 27/44 Linfeng_081211_IgG_4.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 65.85 4.18 1.00 1 2 1072.47729 2143.94731 1.13 31.20 6095 6095 MS2 17/34 Linfeng_081211_IgG_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 70.57 4.18 1.00 1 2 632.34900 1263.69072 -2.90 37.57 4241 4241 MS2 18/20 Linfeng_091611_rIgG_2.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 51.34 4.17 1.00 1 2 627.80579 1254.60430 -2.45 22.30 1861 1861 MS2 16/26 Linfeng_091611_rIgG_3.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 56.55 4.17 1.00 1 2 597.31128 1193.61528 -0.70 29.72 6029 6029 MS2 17/18 Linfeng_081211_IgG_10.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 64.03 4.17 1.00 1 2 597.31061 1193.61394 -1.83 29.76 6169 6169 MS2 16/18 Linfeng_081211_IgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 40.65 4.16 1.00 1 2 738.39563 1475.78398 -0.91 32.31 6419 6419 MS2 16/22 Linfeng_081211_IgG_2.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 67.75 4.16 1.00 1 2 597.31006 1193.61284 -2.75 29.18 2771 2771 MS2 17/18 Linfeng_091611_rIgG_3.raw High KLLEGEEcR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00329306.3;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 18 7 CID C8(Carbamidomethyl) 50.49 4.16 1.00 1 3 378.52536 1133.56153 -0.41 21.23 3104 3104 MS2 24/32 Linfeng_081211_IgG_2.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 69.11 4.16 1.00 1 2 696.34369 1391.68010 -0.06 19.42 2672 2672 MS2 18/22 Linfeng_081211_IgG_5.raw High LNDLEEALQQAK IPI:IPI00021304.1 1 1 CID 71.26 4.15 1.00 1 2 686.35950 1371.71172 0.16 37.48 6397 6397 MS2 16/22 Linfeng_081211_IgG_9.raw High TAAENDFVTLKK IPI:IPI00021304.1 1 1 CID 52.34 4.13 1.00 1 2 668.85876 1336.71025 -0.39 26.37 4944 4944 MS2 18/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.73 4.12 1.00 1 2 738.39594 1475.78459 -0.49 25.12 4530 4530 MS2 17/22 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 80.24 4.12 1.00 1 2 632.34833 1263.68938 -3.96 37.76 4386 4386 MS2 18/20 Linfeng_091811_SIN3A_1.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 68.68 4.12 1.00 1 2 597.31042 1193.61357 -2.13 29.29 2951 2951 MS2 17/18 Linfeng_091611_rIgG_10.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.78 4.12 1.00 1 2 738.39673 1475.78618 0.58 29.55 5588 5588 MS2 16/22 Linfeng_081211_IgG_2.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 61.40 4.11 1.00 1 2 597.30963 1193.61199 -3.46 29.28 3363 3363 MS2 17/18 Linfeng_091611_rIgG_4.raw High YEELQVTVGR 1 0 CID 63.40 4.10 1.00 1 2 597.30933 1193.61138 -3.98 29.43 3253 3253 MS2 17/18 Linfeng_091811_SIN3A_2.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 73.13 4.10 1.00 1 2 632.34863 1263.68999 -3.48 37.65 4238 4238 MS2 18/20 Linfeng_091611_rIgG_9.raw High YEELQVTVGR 1 0 CID 70.31 4.10 1.00 1 2 597.30969 1193.61211 -3.36 29.67 3345 3345 MS2 17/18 Linfeng_091811_SIN3A_6.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 57.99 4.09 1.00 1 2 597.31146 1193.61565 -0.40 29.82 5996 5996 MS2 15/18 Linfeng_081211_IgG_4.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 72.63 4.09 1.00 1 2 632.34796 1263.68865 -4.54 37.55 3833 3833 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 70.57 4.09 1.00 1 2 632.34863 1263.68999 -3.48 37.77 4397 4397 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDVEIATYR IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1 17 3 CID 67.35 4.08 1.00 1 2 632.34827 1263.68926 -4.06 38.01 4446 4446 MS2 18/20 Linfeng_091811_SIN3A_4.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 57.19 4.08 1.00 1 2 597.31006 1193.61284 -2.75 29.26 3159 3159 MS2 17/18 Linfeng_091611_rIgG_9.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.78 4.08 1.00 1 3 492.59982 1475.78492 -0.27 29.90 5704 5704 MS2 22/44 Linfeng_081211_IgG_2.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 31.91 4.08 1.00 1 2 599.27820 1197.54912 -0.34 18.58 2416 2416 MS2 17/28 Linfeng_081211_IgG_5.raw High YEELQVTVGR 1 0 CID 66.49 4.08 1.00 1 2 597.30957 1193.61186 -3.57 29.35 3278 3278 MS2 17/18 Linfeng_091811_SIN3A_1.raw High LALDVEIATYR IPI:IPI00021304.1 17 1 CID 52.73 4.07 1.00 1 2 632.35004 1263.69280 -1.25 52.11 6101 6101 MS2 16/20 Linfeng_091611_rIgG_1.raw High YLDGLTAER IPI:IPI00021304.1 1 1 CID 41.66 4.07 1.00 1 2 519.26587 1037.52446 -1.72 32.80 5370 5370 MS2 15/16 Linfeng_081211_IgG_9.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 46.69 4.06 1.00 1 2 665.36707 1329.72685 0.57 44.96 10487 10487 MS2 18/22 Linfeng_081211_IgG_4.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 56.01 4.06 1.00 1 2 696.34351 1391.67974 -0.32 19.42 2730 2730 MS2 17/22 Linfeng_081211_IgG_7.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 75.36 4.05 1.00 1 2 794.84644 1588.68559 1.34 16.74 1432 1432 MS2 18/38 Linfeng_081211_IgG_1.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 58.01 4.05 1.00 1 2 597.31061 1193.61394 -1.83 30.02 6062 6062 MS2 16/18 Linfeng_081211_IgG_7.raw High YLDGLTAER IPI:IPI00021304.1 1 1 CID 45.47 4.03 1.00 1 2 519.26630 1037.52532 -0.89 29.76 6031 6031 MS2 15/16 Linfeng_081211_IgG_6.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 58.01 4.02 1.00 1 2 632.34888 1263.69048 -3.09 37.56 8567 8567 MS2 16/20 Linfeng_081211_IgG_10.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 70.06 4.01 1.00 1 2 665.36694 1329.72661 0.39 47.92 11292 11292 MS2 19/22 Linfeng_081211_IgG_5.raw High YLDGLTAER IPI:IPI00021304.1 1 1 CID 42.25 4.01 1.00 1 2 519.26648 1037.52568 -0.54 29.82 5994 5994 MS2 15/16 Linfeng_081211_IgG_4.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 66.70 4.00 1.00 1 2 599.27850 1197.54973 0.17 19.46 2559 2559 MS2 17/28 Linfeng_081211_IgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 108.98 4.00 1.00 1 2 871.37750 1741.74773 -0.47 19.43 2861 2861 MS2 20/44 Linfeng_081211_IgG_10.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 60.06 4.00 1.00 1 2 627.80768 1254.60808 0.56 23.55 4007 4007 MS2 16/26 Linfeng_081211_IgG_4.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 54.27 4.00 1.00 1 2 597.31274 1193.61821 1.75 30.85 6354 6354 MS2 16/18 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 41.23 3.98 1.00 1 2 665.36853 1329.72978 2.78 45.03 11080 11080 MS2 17/22 Linfeng_081211_IgG_7.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 72.72 3.98 1.00 1 2 597.31110 1193.61492 -1.01 30.71 6537 6537 MS2 16/18 Linfeng_081211_IgG_3.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 37.78 3.97 1.00 1 2 696.34344 1391.67961 -0.41 18.91 2765 2765 MS2 15/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.99 3.97 1.00 1 2 738.39655 1475.78581 0.33 28.36 5498 5498 MS2 16/22 Linfeng_081211_IgG_4.raw High YLDGLTAER IPI:IPI00021304.1 1 1 CID 47.75 3.97 1.00 1 2 519.26563 1037.52397 -2.19 29.31 6013 6013 MS2 15/16 Linfeng_081211_IgG_8.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 69.31 3.96 1.00 1 2 632.34991 1263.69255 -1.45 37.73 8525 8525 MS2 17/20 Linfeng_081211_IgG_5.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 57.28 3.95 1.00 1 2 632.34998 1263.69267 -1.35 37.69 8537 8537 MS2 17/20 Linfeng_081211_IgG_4.raw High SKEEAEALYHSK IPI:IPI00021304.1 1 1 CID 47.98 3.95 1.00 1 2 696.34454 1391.68181 1.17 19.28 2641 2641 MS2 17/22 Linfeng_081211_IgG_4.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 54.90 3.91 1.00 1 2 665.36700 1329.72673 0.48 38.47 8781 8781 MS2 18/22 Linfeng_081211_IgG_4.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 68.08 3.91 1.00 1 2 597.31146 1193.61565 -0.40 29.84 6065 6065 MS2 16/18 Linfeng_081211_IgG_6.raw High TAAENDFVTLKK IPI:IPI00021304.1 1 1 CID 35.60 3.90 1.00 1 2 668.85986 1336.71245 1.26 43.93 7342 7342 MS2 12/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.39 3.88 1.00 1 2 738.39716 1475.78703 1.16 39.99 6212 6212 MS2 15/22 Linfeng_081211_IgG_1.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 41.45 3.85 1.00 1 2 597.31012 1193.61296 -2.65 37.65 5581 5581 MS2 15/18 Linfeng_081211_IgG_1.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 81.64 3.83 1.00 1 2 870.85669 1740.70610 0.27 18.85 2504 2504 MS2 20/38 Linfeng_081211_IgG_5.raw High TSQNSELNNmQDLVEDYK IPI:IPI00021304.1 1 1 CID M10(Oxidation) 92.95 3.82 1.00 1 2 1072.47461 2143.94194 -1.38 30.86 6590 6590 MS2 17/34 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 43.80 3.81 1.00 1 2 738.39691 1475.78655 0.83 30.72 6302 6302 MS2 13/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 47.05 3.78 1.00 1 2 738.39484 1475.78240 -1.98 28.25 5512 5512 MS2 14/22 Linfeng_081211_IgG_6.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 63.57 3.77 1.00 1 2 665.32275 1329.63823 -0.88 25.03 4293 4293 MS2 14/22 Linfeng_081211_IgG_2.raw High GGSSSGGGYGSGGGGSSSVK IPI:IPI00021304.1 1 1 CID 78.08 3.77 1.00 1 2 794.84668 1588.68608 1.65 15.64 1794 1794 MS2 22/38 Linfeng_081211_IgG_9.raw High YEELQVTVGR IPI:IPI00021304.1 1 1 CID 43.92 3.74 1.00 1 2 597.31085 1193.61443 -1.42 31.17 6680 6680 MS2 14/18 Linfeng_081211_IgG_8.raw High GFSSGSAVVSGGSR IPI:IPI00021304.1 1 1 CID 20.56 3.74 1.00 1 2 627.80719 1254.60710 -0.21 27.36 5206 5206 MS2 14/26 Linfeng_081211_IgG_4.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 82.73 3.73 1.00 1 2 870.85663 1740.70598 0.20 18.50 2446 2446 MS2 21/38 Linfeng_081211_IgG_9.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.15 3.71 1.00 1 2 738.39502 1475.78276 -1.73 29.28 5994 5994 MS2 15/22 Linfeng_081211_IgG_3.raw High LALDVEIATYR IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00942512.1;IPI:IPI00956313.1 17 7 CID 71.81 3.71 1.00 1 2 632.35046 1263.69365 -0.58 45.94 7965 7965 MS2 16/20 Linfeng_081211_IgG_1.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 74.13 3.70 1.00 1 2 870.85718 1740.70708 0.83 19.33 2700 2700 MS2 19/38 Linfeng_081211_IgG_3.raw High RSTSSFScLSR IPI:IPI00021304.1 1 1 CID C8(Carbamidomethyl) 50.92 3.69 1.00 1 2 644.30841 1287.60954 -1.17 22.87 3678 3678 MS2 13/20 Linfeng_081211_IgG_5.raw High TAAENDFVTLKK IPI:IPI00021304.1 1 1 CID 75.27 3.69 1.00 1 2 668.85785 1336.70842 -1.76 26.45 4750 4750 MS2 17/22 Linfeng_081211_IgG_5.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 58.63 3.67 1.00 1 2 730.90533 1460.80339 2.60 43.89 10267 10267 MS2 16/22 Linfeng_081211_IgG_4.raw High NVQDAIADAEQR IPI:IPI00021304.1 1 1 CID 68.69 3.66 1.00 1 2 665.32501 1329.64275 2.52 31.03 5025 5025 MS2 15/22 Linfeng_081211_IgG_9.raw High TAAENDFVTLKK IPI:IPI00021304.1 1 1 CID 33.49 3.66 1.00 1 2 668.85779 1336.70830 -1.85 27.87 5551 5551 MS2 16/22 Linfeng_081211_IgG_3.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 42.38 3.65 1.00 1 2 665.36804 1329.72881 2.04 45.88 11807 11807 MS2 17/22 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 30.99 3.65 1.00 1 2 738.39575 1475.78423 -0.74 33.32 6729 6729 MS2 13/22 Linfeng_081211_IgG_2.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 68.15 3.64 1.00 1 2 730.90631 1460.80535 3.94 44.84 10877 10877 MS2 16/22 Linfeng_081211_IgG_6.raw High GGSGGGGSISGGGYGSGGGSGGR IPI:IPI00021304.1 1 1 CID 35.52 3.62 1.00 1 2 871.37860 1741.74993 0.79 20.44 2150 2150 MS2 15/44 Linfeng_081211_IgG_1.raw High NLDLDSIIAEVK IPI:IPI00009867.3;IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 14 6 CID 25.36 3.60 1.00 1 2 665.36621 1329.72515 -0.71 38.60 9016 9016 MS2 13/22 Linfeng_081211_IgG_7.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 44.61 3.58 1.00 1 2 599.27911 1197.55095 1.19 18.06 2338 2338 MS2 16/28 Linfeng_081211_IgG_9.raw High GGSISGGGYGSGGGK IPI:IPI00021304.1 1 1 CID 42.98 3.57 1.00 1 2 599.27863 1197.54997 0.38 18.31 2537 2537 MS2 14/28 Linfeng_081211_IgG_10.raw High TAAENDFVTLKK IPI:IPI00021304.1 1 1 CID 61.66 3.57 1.00 1 2 668.85791 1336.70854 -1.67 26.76 5078 5078 MS2 15/22 Linfeng_081211_IgG_6.raw High VDLLNQEIEFLK IPI:IPI00021304.1 1 1 CID 54.14 3.51 1.00 1 2 730.90448 1460.80168 1.43 44.04 10694 10694 MS2 13/22 Linfeng_081211_IgG_10.raw High DVDNAYmIK IPI:IPI00021304.1 1 1 CID M7(Oxidation) 43.08 3.51 1.00 1 2 542.75244 1084.49761 -0.35 26.29 4207 4207 MS2 13/16 Linfeng_081211_IgG_9.raw High GSSSGGGYSSGSSSYGSGGR IPI:IPI00021304.1 3 1 CID 100.55 3.50 1.00 1 2 870.85730 1740.70732 0.97 19.67 2624 2624 MS2 21/38 Linfeng_081211_IgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR IPI:IPI00021304.1 1 1 CID 28.81 3.49 1.00 1 2 1416.10217 2831.19707 0.96 46.19 8039 8039 MS2 16/70 Linfeng_081211_IgG_1.raw High TAAENDFVTLK IPI:IPI00021304.1 1 1 CID 55.12 3.49 1.00 1 2 604.81067 1208.61406 -1.44 30.86 6345 6345 MS2 16/20 Linfeng_081211_IgG_7.raw High TSQNSELNNMQDLVEDYK IPI:IPI00021304.1 1 1 CID 50.17 3.49 1.00 1 2 1064.47961 2127.95195 0.93 38.26 8722 8722 MS2 12/34 Linfeng_081211_IgG_4.raw High TAAENDFVTLK IPI:IPI00021304.1 1 1 CID 53.69 3.47 1.00 1 2 604.81213 1208.61699 0.98 30.78 6326 6326 MS2 16/20 Linfeng_081211_IgG_4.raw High AQYEEIAQR IPI:IPI00021304.1;IPI:IPI00293665.9;IPI:IPI00797452.2;IPI:IPI00909059.5;IPI:IPI00910738.1;IPI:IPI00956313.1 11 6 CID 43.06 3.47 1.00 1 2 554.27423 1107.54119 -1.59 23.07 3742 3742 MS2 14/16 Linfeng_081211_IgG_5.raw High HGGGGGGFGGGGFGSR IPI:IPI00021304.1 1 1 CID 55.30 3.47 1.00 1 2 660.79669 1320.58611 2.42 26.40 4730 4730 MS2 13/30 Linfeng_081211_IgG_2.raw IPI:IPI00009865.4 584 58.8 5.21 "Keratin, type I cytoskeletal 10" 55.48 753 25 2297.25 53.77 260 24 2401.12 52.05 250 20 2416.99 52.05 243 20 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 300.00 8.61 1.00 1 3 958.13434 2872.38846 -1.55 48.76 5873 5873 MS2 35/104 Linfeng_091611_rIgG_4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 120.15 8.58 1.00 1 3 963.46570 2888.38254 -1.83 43.98 5188 5188 MS2 37/104 Linfeng_091811_SIN3A_1.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 139.17 8.45 1.00 1 4 687.36139 2746.42373 1.60 54.53 6437 6437 MS2 48/132 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 105.93 8.40 1.00 1 3 963.46564 2888.38236 -1.90 44.25 5226 5226 MS2 37/104 Linfeng_091811_SIN3A_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 130.20 8.28 1.00 1 3 958.13458 2872.38919 -1.30 48.88 5421 5421 MS2 34/104 Linfeng_091611_rIgG_10.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 139.17 8.18 1.00 1 3 963.46570 2888.38254 -1.83 43.99 5160 5160 MS2 39/104 Linfeng_091811_SIN3A_2.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 300.00 8.13 1.00 1 3 789.75800 2367.25943 -1.41 45.61 5204 5204 MS2 35/80 Linfeng_091811_SIN3A_10.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 300.00 8.09 1.00 1 4 687.36169 2746.42495 2.04 54.53 6339 6339 MS2 49/132 Linfeng_091811_SIN3A_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 87.63 8.05 1.00 1 3 1018.21631 3052.63437 2.27 52.63 6244 6244 MS2 32/104 Linfeng_091811_SIN3A_6.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 140.15 8.04 1.00 1 4 687.36194 2746.42592 2.40 54.60 6408 6408 MS2 49/132 Linfeng_091811_SIN3A_6.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 142.39 7.98 1.00 1 3 789.75775 2367.25870 -1.72 45.44 4993 4993 MS2 35/80 Linfeng_091611_rIgG_10.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 106.43 7.98 1.00 1 3 1018.21503 3052.63053 1.01 52.67 6105 6105 MS2 32/104 Linfeng_091811_SIN3A_8.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR 1 0 CID M26(Oxidation) 98.80 7.93 1.00 1 3 963.46680 2888.38584 -0.69 43.89 5036 5036 MS2 35/104 Linfeng_091611_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 106.04 7.91 1.00 1 3 1018.21356 3052.62613 -0.43 52.18 6078 6078 MS2 33/104 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 54.57 7.91 1.00 1 3 963.46564 2888.38236 -1.90 44.06 5227 5227 MS2 35/104 Linfeng_091811_SIN3A_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 97.88 7.81 1.00 1 3 1018.21246 3052.62284 -1.51 52.40 6215 6215 MS2 34/104 Linfeng_091811_SIN3A_2.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 131.46 7.80 1.00 1 3 789.75793 2367.25925 -1.48 45.35 5219 5219 MS2 36/80 Linfeng_091611_rIgG_9.raw High SKELTTEIDNNIEQISSYK 1 0 CID 129.82 7.80 1.00 1 3 738.03558 2212.09220 -2.63 32.63 3599 3599 MS2 35/72 Linfeng_091611_rIgG_9.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 134.14 7.77 1.00 1 4 687.36157 2746.42446 1.87 54.51 6414 6414 MS2 43/132 Linfeng_091811_SIN3A_3.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 142.39 7.75 1.00 1 3 789.75800 2367.25943 -1.41 45.35 5229 5229 MS2 37/80 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 90.25 7.74 1.00 1 3 963.46533 2888.38144 -2.21 43.94 5187 5187 MS2 39/104 Linfeng_091811_SIN3A_3.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 133.39 7.71 1.00 1 3 916.14661 2746.42527 2.16 54.39 6295 6295 MS2 35/88 Linfeng_091611_rIgG_2.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 116.36 7.69 1.00 1 2 1106.55334 2212.09941 0.63 36.69 8192 8192 MS2 26/36 Linfeng_081211_IgG_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR 1 0 CID M26(Oxidation) 112.43 7.69 1.00 1 3 963.46423 2888.37815 -3.35 43.79 5063 5063 MS2 38/104 Linfeng_091611_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 106.29 7.68 1.00 1 3 1018.21350 3052.62595 -0.49 52.13 5665 5665 MS2 33/104 Linfeng_091611_rIgG_3.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 141.16 7.68 1.00 1 3 789.75793 2367.25925 -1.48 45.74 5309 5309 MS2 35/80 Linfeng_091811_SIN3A_9.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 105.00 7.68 1.00 1 3 963.46533 2888.38144 -2.21 44.10 5014 5014 MS2 37/104 Linfeng_091811_SIN3A_10.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 93.17 7.63 1.00 1 3 958.13293 2872.38425 -3.02 48.72 5240 5240 MS2 32/104 Linfeng_091611_rIgG_3.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 89.79 7.59 1.00 1 3 958.13239 2872.38260 -3.59 49.04 6014 6014 MS2 30/104 Linfeng_091811_SIN3A_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 69.06 7.56 1.00 1 3 968.79968 2904.38449 0.60 41.74 10451 10451 MS2 32/104 Linfeng_081211_IgG_3.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 74.40 7.55 1.00 1 3 958.13202 2872.38150 -3.97 48.66 5673 5673 MS2 30/104 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 61.97 7.53 1.00 1 3 963.46448 2888.37888 -3.10 46.78 5582 5582 MS2 29/104 Linfeng_091611_rIgG_5.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 133.62 7.52 1.00 1 3 916.14703 2746.42655 2.63 54.62 6227 6227 MS2 35/88 Linfeng_091811_SIN3A_10.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 141.16 7.51 1.00 1 3 789.75812 2367.25980 -1.25 45.78 5199 5199 MS2 32/80 Linfeng_091811_SIN3A_7.raw High ADLEMQIESLTEELAYLK 1 0 CID 129.37 7.51 1.00 1 3 699.35468 2096.04947 1.25 54.59 5943 5943 MS2 31/68 Linfeng_091611_rIgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 136.18 7.50 1.00 1 3 963.46515 2888.38089 -2.40 47.11 5392 5392 MS2 30/104 Linfeng_091811_SIN3A_10.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 118.30 7.50 1.00 1 3 916.14618 2746.42398 1.69 54.53 6678 6678 MS2 36/88 Linfeng_091811_SIN3A_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR 1 0 CID C7(Carbamidomethyl) 150.00 7.50 1.00 1 2 1171.99243 2342.97759 -2.94 36.49 4106 4106 MS2 21/52 Linfeng_091611_rIgG_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR 1 0 CID C7(Carbamidomethyl) 116.09 7.47 1.00 1 3 781.66272 2342.97361 -4.63 36.42 4098 4098 MS2 42/104 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR 1 0 CID M26(Oxidation) 77.31 7.45 1.00 1 3 963.46271 2888.37357 -4.94 43.73 4620 4620 MS2 33/104 Linfeng_091611_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 79.29 7.44 1.00 1 3 1018.21216 3052.62192 -1.81 52.28 6265 6265 MS2 33/104 Linfeng_091611_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 109.27 7.42 1.00 1 3 781.66284 2342.97397 -4.48 36.72 4412 4412 MS2 41/104 Linfeng_091811_SIN3A_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 73.22 7.41 1.00 1 3 958.13275 2872.38370 -3.21 48.78 5627 5627 MS2 29/104 Linfeng_091611_rIgG_9.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 121.97 7.40 1.00 1 2 1184.13159 2367.25591 -2.90 45.30 4819 4819 MS2 25/40 Linfeng_091611_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 85.22 7.40 1.00 1 3 1018.21606 3052.63364 2.03 52.57 6106 6106 MS2 33/104 Linfeng_091811_SIN3A_9.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 136.74 7.40 1.00 1 3 789.75916 2367.26291 0.06 45.57 5424 5424 MS2 36/80 Linfeng_091811_SIN3A_4.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 117.52 7.38 1.00 1 3 789.75909 2367.26273 -0.01 45.11 10573 10573 MS2 33/80 Linfeng_081211_IgG_5.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 137.14 7.34 1.00 1 3 916.14679 2746.42582 2.36 54.46 6531 6531 MS2 36/88 Linfeng_091611_rIgG_4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR 1 0 CID M26(Oxidation) 68.08 7.33 1.00 1 3 963.46631 2888.38437 -1.20 43.92 5050 5050 MS2 33/104 Linfeng_091611_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 154.77 7.33 1.00 1 2 1171.99341 2342.97954 -2.10 36.43 8454 8454 MS2 22/52 Linfeng_081211_IgG_8.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 300.00 7.33 1.00 1 3 916.14600 2746.42344 1.49 54.50 6335 6335 MS2 34/88 Linfeng_091811_SIN3A_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 133.62 7.32 1.00 1 3 963.46515 2888.38089 -2.40 46.76 5625 5625 MS2 32/104 Linfeng_091611_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 100.12 7.29 1.00 1 3 1018.21320 3052.62503 -0.79 52.27 6402 6402 MS2 35/104 Linfeng_091611_rIgG_8.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 135.76 7.29 1.00 1 3 916.14630 2746.42435 1.83 54.50 6412 6412 MS2 33/88 Linfeng_091811_SIN3A_3.raw High ADLEMQIESLTEELAYLK 1 0 CID 137.61 7.29 1.00 1 3 699.35498 2096.05039 1.68 54.58 6397 6397 MS2 31/68 Linfeng_091611_rIgG_1.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 134.59 7.27 1.00 1 3 789.75818 2367.25998 -1.17 45.46 5379 5379 MS2 33/80 Linfeng_091811_SIN3A_3.raw High ADLEMQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID 113.65 7.26 1.00 1 3 699.35364 2096.04636 -0.24 54.66 6431 6431 MS2 31/68 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 79.90 7.23 1.00 1 3 963.46649 2888.38492 -1.01 46.83 5575 5575 MS2 32/104 Linfeng_091611_rIgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 125.61 7.23 1.00 1 3 963.46393 2888.37723 -3.67 46.70 4995 4995 MS2 30/104 Linfeng_091611_rIgG_3.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 120.18 7.23 1.00 1 2 1184.13318 2367.25908 -1.55 45.62 5581 5581 MS2 26/40 Linfeng_091811_SIN3A_5.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 143.21 7.22 1.00 1 3 916.14746 2746.42783 3.09 54.43 6476 6476 MS2 32/88 Linfeng_091611_rIgG_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 47.34 7.21 1.00 1 3 958.13361 2872.38626 -2.32 48.72 5719 5719 MS2 25/104 Linfeng_091611_rIgG_7.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 136.00 7.21 1.00 1 3 789.75763 2367.25833 -1.87 45.23 4810 4810 MS2 35/80 Linfeng_091611_rIgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 135.38 7.21 1.00 1 3 963.46527 2888.38126 -2.28 46.71 5435 5435 MS2 32/104 Linfeng_091611_rIgG_1.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 100.05 7.20 1.00 1 2 1184.13306 2367.25884 -1.66 45.60 5397 5397 MS2 24/40 Linfeng_091811_SIN3A_3.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 116.84 7.20 1.00 1 4 687.36096 2746.42202 0.98 54.64 6229 6229 MS2 40/132 Linfeng_091811_SIN3A_10.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 104.90 7.18 1.00 1 2 1184.12976 2367.25224 -4.44 45.56 5387 5387 MS2 23/40 Linfeng_091811_SIN3A_1.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 300.00 7.17 1.00 1 3 916.14539 2746.42160 0.83 54.62 6207 6207 MS2 36/88 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 96.42 7.17 1.00 1 3 958.13257 2872.38315 -3.40 48.95 5784 5784 MS2 30/104 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 117.09 7.16 1.00 1 3 958.13531 2872.39139 -0.53 48.89 5804 5804 MS2 32/104 Linfeng_091811_SIN3A_1.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 125.75 7.16 1.00 1 2 1184.13159 2367.25591 -2.90 45.69 5375 5375 MS2 23/40 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 134.41 7.12 1.00 1 3 963.46594 2888.38327 -1.58 46.72 5391 5391 MS2 30/104 Linfeng_091611_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 97.81 7.12 1.00 1 3 1018.21472 3052.62961 0.71 52.19 6037 6037 MS2 30/104 Linfeng_091611_rIgG_9.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 107.91 7.10 1.00 1 2 1184.13306 2367.25884 -1.66 45.77 5224 5224 MS2 23/40 Linfeng_091811_SIN3A_10.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 300.00 7.10 1.00 1 3 1018.21533 3052.63144 1.31 52.21 6114 6114 MS2 32/104 Linfeng_091611_rIgG_1.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 118.06 7.09 1.00 1 2 1184.13196 2367.25664 -2.59 45.34 5449 5449 MS2 24/40 Linfeng_091611_rIgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 131.59 7.08 1.00 1 3 963.46698 2888.38639 -0.50 46.93 5559 5559 MS2 28/104 Linfeng_091811_SIN3A_1.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 156.54 7.08 1.00 1 3 916.14563 2746.42234 1.09 54.40 6509 6509 MS2 34/88 Linfeng_091611_rIgG_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 43.16 7.07 1.00 1 3 968.79669 2904.37552 -2.49 41.93 4715 4715 MS2 31/104 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 64.36 7.07 1.00 1 3 958.13373 2872.38663 -2.19 48.86 5819 5819 MS2 28/104 Linfeng_091611_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 77.25 7.06 1.00 1 3 1018.21307 3052.62467 -0.91 52.29 5840 5840 MS2 32/104 Linfeng_091611_rIgG_10.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 99.45 7.06 1.00 1 2 1184.13440 2367.26152 -0.52 45.14 10579 10579 MS2 25/40 Linfeng_081211_IgG_5.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 146.12 7.06 1.00 1 3 916.14636 2746.42453 1.89 54.38 5917 5917 MS2 33/88 Linfeng_091611_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 118.43 7.06 1.00 1 3 781.66455 2342.97910 -2.29 36.63 4250 4250 MS2 41/104 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 69.27 7.05 1.00 1 3 958.13092 2872.37821 -5.12 48.81 5836 5836 MS2 29/104 Linfeng_091611_rIgG_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 140.62 7.05 1.00 1 3 963.46594 2888.38327 -1.58 46.86 5170 5170 MS2 30/104 Linfeng_091611_rIgG_10.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 72.98 6.99 1.00 1 3 1018.21320 3052.62503 -0.79 53.22 6238 6238 MS2 27/104 Linfeng_091611_rIgG_1.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 300.00 6.98 1.00 1 4 687.36188 2746.42568 2.31 54.45 5925 5925 MS2 49/132 Linfeng_091611_rIgG_3.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 92.19 6.98 1.00 1 3 958.13367 2872.38645 -2.25 48.98 5819 5819 MS2 27/104 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 59.14 6.98 1.00 1 3 968.79858 2904.38120 -0.53 41.67 4899 4899 MS2 31/104 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 70.63 6.96 1.00 1 3 958.13367 2872.38645 -2.25 49.12 5833 5833 MS2 30/104 Linfeng_091811_SIN3A_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 88.18 6.95 1.00 1 3 968.79688 2904.37607 -2.30 41.55 4749 4749 MS2 30/104 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 98.55 6.95 1.00 1 3 599.67523 1797.01114 -0.32 44.10 10304 10304 MS2 34/60 Linfeng_081211_IgG_5.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 108.21 6.94 1.00 1 2 998.98450 1996.96172 -4.66 39.28 4586 4586 MS2 23/32 Linfeng_091811_SIN3A_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 82.44 6.94 1.00 1 3 1018.21301 3052.62448 -0.97 52.20 6299 6299 MS2 35/104 Linfeng_091611_rIgG_4.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 99.71 6.93 1.00 1 2 1184.13501 2367.26274 -0.01 45.62 5432 5432 MS2 25/40 Linfeng_091811_SIN3A_4.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 113.46 6.93 1.00 1 2 998.98535 1996.96343 -3.80 39.36 4565 4565 MS2 22/32 Linfeng_091811_SIN3A_2.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 133.34 6.91 1.00 1 3 789.75940 2367.26364 0.37 45.42 5318 5318 MS2 35/80 Linfeng_091611_rIgG_7.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 105.68 6.90 1.00 1 3 789.76086 2367.26804 2.23 45.29 11147 11147 MS2 31/80 Linfeng_081211_IgG_7.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 98.98 6.90 1.00 1 3 599.67432 1797.00840 -1.85 44.61 5170 5170 MS2 32/60 Linfeng_091811_SIN3A_9.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 128.82 6.90 1.00 1 3 789.75684 2367.25595 -2.88 45.34 5261 5261 MS2 35/80 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 62.92 6.89 1.00 1 3 958.13354 2872.38608 -2.38 49.06 5622 5622 MS2 26/104 Linfeng_091811_SIN3A_10.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 123.44 6.89 1.00 1 3 789.75708 2367.25669 -2.57 45.52 5353 5353 MS2 34/80 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 110.07 6.89 1.00 1 3 968.79700 2904.37644 -2.17 41.61 4836 4836 MS2 28/104 Linfeng_091611_rIgG_7.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 300.00 6.88 1.00 1 3 789.75732 2367.25742 -2.26 45.30 5444 5444 MS2 34/80 Linfeng_091611_rIgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 55.00 6.88 1.00 1 3 968.79651 2904.37497 -2.68 41.46 4332 4332 MS2 31/104 Linfeng_091611_rIgG_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 97.41 6.88 1.00 1 3 599.67383 1797.00693 -2.67 44.52 5067 5067 MS2 34/60 Linfeng_091811_SIN3A_10.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 86.43 6.87 1.00 1 3 1018.21686 3052.63602 2.81 57.47 6685 6685 MS2 33/104 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 112.97 6.84 1.00 1 3 963.46545 2888.38181 -2.09 46.77 5712 5712 MS2 31/104 Linfeng_091611_rIgG_8.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 137.14 6.84 1.00 1 3 916.14642 2746.42472 1.96 54.59 6407 6407 MS2 32/88 Linfeng_091811_SIN3A_6.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 112.86 6.84 1.00 1 3 694.99109 2082.95871 -2.97 36.38 4093 4093 MS2 34/64 Linfeng_091611_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 86.02 6.83 1.00 1 3 1018.21625 3052.63419 2.21 52.35 6222 6222 MS2 34/104 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 49.30 6.83 1.00 1 3 968.79694 2904.37625 -2.24 41.99 4788 4788 MS2 30/104 Linfeng_091811_SIN3A_8.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 115.68 6.82 1.00 1 3 694.99005 2082.95560 -4.46 36.70 4409 4409 MS2 33/64 Linfeng_091811_SIN3A_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 59.79 6.81 1.00 1 3 968.79724 2904.37717 -1.92 41.97 4839 4839 MS2 31/104 Linfeng_091811_SIN3A_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 82.42 6.80 1.00 1 3 1018.21753 3052.63803 3.47 52.46 6445 6445 MS2 33/104 Linfeng_091811_SIN3A_5.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 300.00 6.79 1.00 1 3 789.75763 2367.25833 -1.87 45.71 5408 5408 MS2 34/80 Linfeng_091811_SIN3A_6.raw High NVQALEIELQSQLALK 1 0 CID 106.08 6.79 1.00 1 3 599.67340 1797.00565 -3.38 44.29 4850 4850 MS2 31/60 Linfeng_091611_rIgG_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 70.94 6.79 1.00 1 3 968.79639 2904.37461 -2.80 41.53 4965 4965 MS2 29/104 Linfeng_091611_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 137.84 6.79 1.00 1 2 854.38690 1707.76653 -3.34 33.96 4060 4060 MS2 23/36 Linfeng_091611_rIgG_8.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 106.83 6.78 1.00 1 2 1041.98303 2082.95879 -2.93 36.41 4096 4096 MS2 22/32 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 90.94 6.78 1.00 1 3 968.79657 2904.37516 -2.62 41.70 4897 4897 MS2 32/104 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 73.67 6.78 1.00 1 3 968.79645 2904.37479 -2.74 41.72 4871 4871 MS2 29/104 Linfeng_091811_SIN3A_2.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 97.12 6.78 1.00 1 3 738.03699 2212.09641 -0.73 32.88 6950 6950 MS2 32/72 Linfeng_081211_IgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 300.00 6.76 1.00 1 3 781.66412 2342.97782 -2.84 36.69 4217 4217 MS2 43/104 Linfeng_091811_SIN3A_2.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 137.14 6.75 1.00 1 3 916.14642 2746.42472 1.96 54.45 6432 6432 MS2 32/88 Linfeng_091811_SIN3A_1.raw High NQILNLTTDNANILLQIDNAR 1 0 CID 92.00 6.74 1.00 1 3 789.76050 2367.26694 1.77 45.68 5444 5444 MS2 33/80 Linfeng_091611_rIgG_5.raw High ELTTEIDNNIEQISSYK 1 0 CID 127.57 6.74 1.00 1 2 998.98517 1996.96306 -3.99 39.16 4460 4460 MS2 23/32 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK 1 0 CID 96.33 6.74 1.00 1 3 599.67383 1797.00693 -2.67 44.26 5253 5253 MS2 33/60 Linfeng_091611_rIgG_6.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 144.11 6.73 1.00 1 2 854.38751 1707.76775 -2.63 34.26 3961 3961 MS2 25/36 Linfeng_091811_SIN3A_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 77.88 6.73 1.00 1 3 963.46759 2888.38822 0.13 46.75 5485 5485 MS2 30/104 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK 1 0 CID 109.51 6.72 1.00 1 2 998.98657 1996.96587 -2.58 39.20 4527 4527 MS2 22/32 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK 1 0 CID 121.22 6.72 1.00 1 2 998.98572 1996.96416 -3.44 39.11 4032 4032 MS2 23/32 Linfeng_091611_rIgG_3.raw High ELTTEIDNNIEQISSYK 1 0 CID 114.85 6.72 1.00 1 2 998.98541 1996.96355 -3.74 39.11 4426 4426 MS2 22/32 Linfeng_091611_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 113.21 6.71 1.00 1 3 1018.21521 3052.63108 1.19 52.42 6232 6232 MS2 33/104 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 100.84 6.70 1.00 1 3 963.46619 2888.38401 -1.33 46.98 5538 5538 MS2 29/104 Linfeng_091811_SIN3A_2.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 134.48 6.70 1.00 1 2 854.38727 1707.76726 -2.91 34.08 3915 3915 MS2 26/36 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 51.13 6.69 1.00 1 3 968.79681 2904.37589 -2.36 41.86 4926 4926 MS2 30/104 Linfeng_091811_SIN3A_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 118.24 6.69 1.00 1 3 963.46521 2888.38108 -2.34 47.21 5596 5596 MS2 27/104 Linfeng_091811_SIN3A_6.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 107.42 6.69 1.00 1 2 1184.13464 2367.26201 -0.32 46.07 11158 11158 MS2 23/40 Linfeng_081211_IgG_8.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR 1 0 CID C7(Carbamidomethyl) 113.27 6.68 1.00 1 3 781.66290 2342.97416 -4.40 36.39 4295 4295 MS2 44/104 Linfeng_091611_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 60.54 6.67 1.00 1 3 781.66663 2342.98532 0.37 37.59 9049 9049 MS2 34/104 Linfeng_081211_IgG_3.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 139.38 6.67 1.00 1 2 854.38696 1707.76665 -3.27 34.39 3809 3809 MS2 25/36 Linfeng_091811_SIN3A_8.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 114.00 6.66 1.00 1 4 763.91406 3052.63442 2.28 52.36 6223 6223 MS2 40/156 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 48.47 6.66 1.00 1 3 968.79767 2904.37845 -1.48 41.58 4742 4742 MS2 30/104 Linfeng_091611_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 130.07 6.66 1.00 1 2 854.38757 1707.76787 -2.55 34.30 3954 3954 MS2 22/36 Linfeng_091811_SIN3A_6.raw High NVQALEIELQSQLALK 1 0 CID 94.43 6.66 1.00 1 3 599.67334 1797.00547 -3.48 44.07 5098 5098 MS2 33/60 Linfeng_091611_rIgG_1.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 110.60 6.65 1.00 1 2 1056.52673 2112.04619 2.09 54.67 6409 6409 MS2 25/34 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 101.23 6.65 1.00 1 3 968.79694 2904.37625 -2.24 41.65 4922 4922 MS2 29/104 Linfeng_091611_rIgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 127.55 6.65 1.00 1 3 963.46594 2888.38327 -1.58 46.97 5571 5571 MS2 32/104 Linfeng_091811_SIN3A_3.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 92.19 6.65 1.00 1 2 1056.52649 2112.04570 1.86 54.76 6444 6444 MS2 25/34 Linfeng_091811_SIN3A_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 91.62 6.64 1.00 1 3 599.67413 1797.00785 -2.16 44.41 5213 5213 MS2 32/60 Linfeng_091811_SIN3A_2.raw High ELTTEIDNNIEQISSYK 1 0 CID 119.04 6.63 1.00 1 2 998.98572 1996.96416 -3.44 39.19 4448 4448 MS2 23/32 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 113.05 6.63 1.00 1 3 599.67426 1797.00821 -1.95 44.10 5293 5293 MS2 32/60 Linfeng_091611_rIgG_4.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 122.06 6.62 1.00 1 2 998.98602 1996.96477 -3.13 39.53 4627 4627 MS2 23/32 Linfeng_091811_SIN3A_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 50.78 6.62 1.00 1 3 968.79724 2904.37717 -1.92 41.85 4941 4941 MS2 32/104 Linfeng_091811_SIN3A_4.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 89.21 6.62 1.00 1 3 599.67377 1797.00675 -2.77 44.59 5113 5113 MS2 33/60 Linfeng_091811_SIN3A_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 86.49 6.61 1.00 1 2 1056.52686 2112.04643 2.21 54.83 6433 6433 MS2 24/34 Linfeng_091811_SIN3A_6.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 87.65 6.61 1.00 1 2 1056.52576 2112.04424 1.17 54.71 6460 6460 MS2 25/34 Linfeng_091811_SIN3A_1.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 137.61 6.61 1.00 1 2 854.38635 1707.76543 -3.98 34.14 4066 4066 MS2 23/36 Linfeng_091811_SIN3A_5.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 105.12 6.61 1.00 1 3 694.99219 2082.96201 -1.39 36.47 8466 8466 MS2 33/64 Linfeng_081211_IgG_8.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 66.36 6.61 1.00 1 3 958.13483 2872.38993 -1.04 48.74 5650 5650 MS2 26/104 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 98.64 6.60 1.00 1 3 599.67365 1797.00638 -2.97 44.62 5054 5054 MS2 33/60 Linfeng_091811_SIN3A_7.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 300.00 6.60 1.00 1 2 854.38678 1707.76628 -3.48 33.92 3974 3974 MS2 23/36 Linfeng_091611_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 139.02 6.60 1.00 1 2 854.38708 1707.76689 -3.13 33.80 3752 3752 MS2 24/36 Linfeng_091611_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 135.11 6.60 1.00 1 2 854.38806 1707.76885 -1.98 33.97 3855 3855 MS2 24/36 Linfeng_091611_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 135.38 6.60 1.00 1 2 854.38757 1707.76787 -2.55 34.39 3867 3867 MS2 25/36 Linfeng_091811_SIN3A_9.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR 1 0 CID 77.46 6.60 1.00 1 3 958.13367 2872.38645 -2.25 48.81 5968 5968 MS2 28/104 Linfeng_091611_rIgG_8.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 138.41 6.59 1.00 1 2 854.38690 1707.76653 -3.34 34.02 3946 3946 MS2 25/36 Linfeng_091611_rIgG_5.raw High NVQALEIELQSQLALK 1 0 CID 89.93 6.59 1.00 1 3 599.67358 1797.00620 -3.07 44.21 5261 5261 MS2 33/60 Linfeng_091611_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 300.00 6.59 1.00 1 2 1171.99414 2342.98100 -1.48 36.81 8412 8412 MS2 22/52 Linfeng_081211_IgG_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 67.64 6.59 1.00 1 2 1171.99036 2342.97344 -4.71 36.84 4427 4427 MS2 19/52 Linfeng_091811_SIN3A_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 87.39 6.58 1.00 1 3 963.46704 2888.38657 -0.44 46.95 11363 11363 MS2 30/104 Linfeng_081211_IgG_8.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 110.94 6.58 1.00 1 2 998.98431 1996.96135 -4.84 39.37 4766 4766 MS2 22/32 Linfeng_091811_SIN3A_5.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 130.29 6.57 1.00 1 2 854.38995 1707.77263 0.23 42.05 6810 6810 MS2 23/36 Linfeng_081211_IgG_1.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 136.95 6.57 1.00 1 2 854.38739 1707.76750 -2.77 33.97 3778 3778 MS2 25/36 Linfeng_091611_rIgG_2.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 98.73 6.56 1.00 1 2 1056.52612 2112.04497 1.51 54.70 6546 6546 MS2 24/34 Linfeng_091611_rIgG_5.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 93.23 6.56 1.00 1 2 1056.52625 2112.04521 1.63 54.67 5954 5954 MS2 25/34 Linfeng_091611_rIgG_3.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 156.54 6.56 1.00 1 3 789.75775 2367.25870 -1.72 45.77 5260 5260 MS2 36/80 Linfeng_091811_SIN3A_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 97.21 6.55 1.00 1 2 1056.52356 2112.03984 -0.92 54.78 6710 6710 MS2 24/34 Linfeng_091811_SIN3A_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 150.51 6.55 1.00 1 3 781.66669 2342.98551 0.44 43.96 7351 7351 MS2 36/104 Linfeng_081211_IgG_1.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 91.54 6.55 1.00 1 2 1041.98511 2082.96294 -0.94 36.76 8405 8405 MS2 23/32 Linfeng_081211_IgG_6.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 96.69 6.54 1.00 1 2 1056.52673 2112.04619 2.09 54.73 6558 6558 MS2 24/34 Linfeng_091611_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 138.41 6.54 1.00 1 2 854.38617 1707.76506 -4.20 34.05 3934 3934 MS2 24/36 Linfeng_091611_rIgG_6.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 139.17 6.52 1.00 1 4 687.36194 2746.42592 2.40 54.40 6375 6375 MS2 45/132 Linfeng_091611_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 126.32 6.52 1.00 1 2 854.38708 1707.76689 -3.13 34.39 3743 3743 MS2 23/36 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 104.36 6.51 1.00 1 3 968.79681 2904.37589 -2.36 41.83 4727 4727 MS2 26/104 Linfeng_091811_SIN3A_10.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 95.13 6.51 1.00 1 2 1041.98340 2082.95952 -2.58 36.51 4106 4106 MS2 22/32 Linfeng_091611_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 95.60 6.51 1.00 1 3 1018.21515 3052.63089 1.13 52.47 6034 6034 MS2 33/104 Linfeng_091811_SIN3A_10.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 80.13 6.49 1.00 1 3 738.03821 2212.10007 0.93 34.41 7918 7918 MS2 29/72 Linfeng_081211_IgG_3.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 138.68 6.48 1.00 1 2 854.38641 1707.76555 -3.91 34.04 3899 3899 MS2 26/36 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 123.40 6.48 1.00 1 2 998.98517 1996.96306 -3.99 39.54 4410 4410 MS2 22/32 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 47.87 6.48 1.00 1 3 968.79669 2904.37552 -2.49 41.57 4509 4509 MS2 29/104 Linfeng_091611_rIgG_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 77.00 6.48 1.00 1 3 781.66565 2342.98239 -0.88 36.54 8138 8138 MS2 38/104 Linfeng_081211_IgG_5.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 141.16 6.46 1.00 1 2 854.38745 1707.76763 -2.70 34.16 3884 3884 MS2 25/36 Linfeng_091811_SIN3A_2.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 82.11 6.45 1.00 1 3 704.68622 2112.04410 1.10 54.83 6254 6254 MS2 27/68 Linfeng_091811_SIN3A_10.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 75.48 6.45 1.00 1 3 704.68591 2112.04319 0.67 54.76 6425 6425 MS2 28/68 Linfeng_091811_SIN3A_6.raw High ELTTEIDNNIEQISSYK 1 0 CID 115.88 6.45 1.00 1 2 998.98535 1996.96343 -3.80 39.25 4621 4621 MS2 21/32 Linfeng_091611_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 140.15 6.45 1.00 1 2 854.38611 1707.76494 -4.27 34.20 3748 3748 MS2 25/36 Linfeng_091811_SIN3A_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 82.88 6.44 1.00 1 3 963.46649 2888.38492 -1.01 46.74 5402 5402 MS2 29/104 Linfeng_091611_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR 1 0 CID C7(Carbamidomethyl) 300.00 6.44 1.00 1 3 781.66345 2342.97580 -3.70 36.51 4105 4105 MS2 41/104 Linfeng_091611_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 135.38 6.44 1.00 1 2 854.38782 1707.76836 -2.27 33.91 3535 3535 MS2 24/36 Linfeng_091611_rIgG_10.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 97.85 6.43 1.00 1 2 1056.52722 2112.04717 2.55 54.67 6321 6321 MS2 23/34 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 48.74 6.43 1.00 1 3 968.79907 2904.38266 -0.03 41.21 9892 9892 MS2 26/104 Linfeng_081211_IgG_7.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 154.77 6.42 1.00 1 2 854.38727 1707.76726 -2.91 33.88 3367 3367 MS2 24/36 Linfeng_091611_rIgG_3.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 137.61 6.41 1.00 1 3 916.14832 2746.43039 4.03 53.76 12533 12533 MS2 33/88 Linfeng_081211_IgG_5.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 90.24 6.41 1.00 1 2 1056.52637 2112.04546 1.74 54.71 6301 6301 MS2 25/34 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 91.45 6.41 1.00 1 3 599.67432 1797.00840 -1.85 44.32 5235 5235 MS2 33/60 Linfeng_091811_SIN3A_3.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 88.05 6.40 1.00 1 2 1106.55273 2212.09819 0.08 37.42 8611 8611 MS2 22/36 Linfeng_081211_IgG_7.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 74.89 6.40 1.00 1 3 704.68622 2112.04410 1.10 54.65 6294 6294 MS2 30/68 Linfeng_091611_rIgG_9.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 74.08 6.40 1.00 1 3 666.32861 1996.97129 0.13 39.34 9262 9262 MS2 30/64 Linfeng_081211_IgG_7.raw High ELTTEIDNNIEQISSYK 1 0 CID 120.29 6.40 1.00 1 2 998.98663 1996.96599 -2.52 39.24 4212 4212 MS2 20/32 Linfeng_091611_rIgG_10.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 96.12 6.40 1.00 1 4 763.91315 3052.63076 1.08 52.20 6038 6038 MS2 36/156 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK 1 0 CID 101.85 6.40 1.00 1 3 599.67468 1797.00949 -1.24 44.11 5074 5074 MS2 31/60 Linfeng_091611_rIgG_2.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 98.17 6.39 1.00 1 2 998.98810 1996.96892 -1.05 39.16 8949 8949 MS2 21/32 Linfeng_081211_IgG_5.raw High NVQALEIELQSQLALK 1 0 CID 90.66 6.39 1.00 1 3 599.67407 1797.00766 -2.26 44.12 5154 5154 MS2 32/60 Linfeng_091611_rIgG_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 127.91 6.38 1.00 1 3 963.45911 2888.36277 -8.68 47.05 5760 5760 MS2 28/104 Linfeng_091811_SIN3A_5.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 90.90 6.38 1.00 1 3 599.67438 1797.00858 -1.75 44.37 5237 5237 MS2 34/60 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK 1 0 CID 99.84 6.38 1.00 1 3 666.32629 1996.96433 -3.35 39.11 4427 4427 MS2 31/64 Linfeng_091611_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 129.87 6.37 1.00 1 2 854.38788 1707.76848 -2.20 34.34 7483 7483 MS2 22/36 Linfeng_081211_IgG_5.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 119.73 6.37 1.00 1 2 1056.52722 2112.04717 2.55 54.70 6400 6400 MS2 23/34 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 90.59 6.37 1.00 1 3 666.32581 1996.96286 -4.08 39.29 4587 4587 MS2 31/64 Linfeng_091811_SIN3A_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 214.60 6.37 1.00 1 2 1171.99170 2342.97612 -3.56 36.56 4230 4230 MS2 22/52 Linfeng_091811_SIN3A_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 116.11 6.36 1.00 1 3 781.66541 2342.98166 -1.20 36.87 8429 8429 MS2 39/104 Linfeng_081211_IgG_7.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 101.14 6.36 1.00 1 3 694.99078 2082.95780 -3.41 36.37 4292 4292 MS2 32/64 Linfeng_091611_rIgG_4.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 88.89 6.36 1.00 1 2 1056.52673 2112.04619 2.09 54.83 6228 6228 MS2 24/34 Linfeng_091811_SIN3A_7.raw High NVQALEIELQSQLALK 1 0 CID 92.14 6.36 1.00 1 3 599.67371 1797.00656 -2.87 44.04 4660 4660 MS2 34/60 Linfeng_091611_rIgG_3.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 74.93 6.35 1.00 1 3 704.68604 2112.04355 0.84 54.35 12802 12802 MS2 30/68 Linfeng_081211_IgG_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 98.84 6.35 1.00 1 2 1056.52600 2112.04473 1.40 54.85 6256 6256 MS2 25/34 Linfeng_091811_SIN3A_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 192.82 6.34 1.00 1 2 1171.99243 2342.97759 -2.94 36.74 4224 4224 MS2 24/52 Linfeng_091811_SIN3A_2.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 139.38 6.34 1.00 1 3 789.75714 2367.25687 -2.49 45.49 5378 5378 MS2 33/80 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 87.06 6.34 1.00 1 3 963.46533 2888.38144 -2.21 47.22 5379 5379 MS2 27/104 Linfeng_091811_SIN3A_7.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 94.57 6.34 1.00 1 3 704.68665 2112.04538 1.71 54.72 6361 6361 MS2 33/68 Linfeng_091811_SIN3A_4.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 71.34 6.34 1.00 1 3 704.68616 2112.04392 1.01 54.79 6470 6470 MS2 31/68 Linfeng_091811_SIN3A_2.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 72.23 6.33 1.00 1 3 704.68628 2112.04428 1.19 54.64 6688 6688 MS2 30/68 Linfeng_091611_rIgG_8.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 140.15 6.33 1.00 1 3 916.14630 2746.42435 1.83 54.51 6434 6434 MS2 31/88 Linfeng_091811_SIN3A_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 111.96 6.33 1.00 1 2 1171.99475 2342.98223 -0.96 43.99 7363 7363 MS2 19/52 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 65.55 6.32 1.00 1 3 963.46509 2888.38071 -2.47 47.28 5502 5502 MS2 29/104 Linfeng_091811_SIN3A_9.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 56.88 6.32 1.00 1 3 968.79950 2904.38395 0.41 45.87 7943 7943 MS2 28/104 Linfeng_081211_IgG_1.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 120.99 6.32 1.00 1 2 1041.98462 2082.96196 -1.41 37.34 8950 8950 MS2 22/32 Linfeng_081211_IgG_3.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 103.42 6.31 1.00 1 2 1041.98328 2082.95928 -2.70 36.50 4222 4222 MS2 22/32 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 131.46 6.29 1.00 1 2 998.98657 1996.96587 -2.58 39.58 4646 4646 MS2 24/32 Linfeng_091811_SIN3A_4.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 53.24 6.29 1.00 1 4 687.35938 2746.41567 -1.33 54.63 6208 6208 MS2 40/132 Linfeng_091811_SIN3A_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 98.22 6.28 1.00 1 3 666.32587 1996.96305 -3.99 39.52 4408 4408 MS2 32/64 Linfeng_091811_SIN3A_7.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 138.41 6.28 1.00 1 2 854.38959 1707.77190 -0.20 35.47 7991 7991 MS2 24/36 Linfeng_081211_IgG_6.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 95.17 6.28 1.00 1 2 1056.52551 2112.04375 0.93 54.35 12803 12803 MS2 23/34 Linfeng_081211_IgG_8.raw High NVQALEIELQSQLALK 1 0 CID 103.51 6.27 1.00 1 3 599.67432 1797.00840 -1.85 44.13 5379 5379 MS2 31/60 Linfeng_091611_rIgG_8.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 115.14 6.27 1.00 1 3 694.99103 2082.95853 -3.06 36.83 4085 4085 MS2 33/64 Linfeng_091811_SIN3A_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 109.46 6.27 1.00 1 2 998.98602 1996.96477 -3.13 39.31 4596 4596 MS2 23/32 Linfeng_091811_SIN3A_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 72.12 6.27 1.00 1 2 998.98584 1996.96440 -3.31 35.78 7976 7976 MS2 19/32 Linfeng_081211_IgG_5.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 96.10 6.26 1.00 1 3 694.99207 2082.96164 -1.56 36.71 8389 8389 MS2 33/64 Linfeng_081211_IgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 220.14 6.26 1.00 1 2 1171.99243 2342.97759 -2.94 36.50 8126 8126 MS2 27/52 Linfeng_081211_IgG_5.raw High ELTTEIDNNIEQISSYK 1 0 CID 120.59 6.25 1.00 1 2 998.98553 1996.96379 -3.62 39.17 4658 4658 MS2 23/32 Linfeng_091611_rIgG_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 105.04 6.25 1.00 1 3 694.99048 2082.95688 -3.85 36.79 4289 4289 MS2 33/64 Linfeng_091811_SIN3A_4.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 88.48 6.24 1.00 1 2 998.98737 1996.96745 -1.79 39.04 9075 9075 MS2 20/32 Linfeng_081211_IgG_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 95.66 6.24 1.00 1 3 666.32599 1996.96341 -3.81 39.45 4422 4422 MS2 32/64 Linfeng_091811_SIN3A_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 117.64 6.23 1.00 1 2 998.98340 1996.95952 -5.76 35.66 4112 4112 MS2 22/32 Linfeng_091811_SIN3A_1.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 46.15 6.23 1.00 1 3 704.68756 2112.04813 3.01 54.43 9883 9883 MS2 26/68 Linfeng_081211_IgG_1.raw High GSLGGGFSSGGFSGGSFSR 1 0 CID 300.00 6.23 1.00 1 2 854.38757 1707.76787 -2.55 33.90 3758 3758 MS2 25/36 Linfeng_091611_rIgG_9.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 61.79 6.23 1.00 1 3 958.13287 2872.38407 -3.08 49.29 5630 5630 MS2 24/104 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 66.20 6.22 1.00 1 3 963.46625 2888.38419 -1.26 44.33 5136 5136 MS2 31/104 Linfeng_091811_SIN3A_9.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 137.61 6.22 1.00 1 3 968.79541 2904.37168 -3.81 41.77 5083 5083 MS2 30/104 Linfeng_091811_SIN3A_5.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 74.12 6.21 1.00 1 3 704.68579 2112.04282 0.49 54.68 6397 6397 MS2 27/68 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK 1 0 CID 104.94 6.21 1.00 1 3 666.32605 1996.96360 -3.72 39.17 4462 4462 MS2 31/64 Linfeng_091611_rIgG_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 125.63 6.21 1.00 1 2 998.98584 1996.96440 -3.31 39.47 4424 4424 MS2 24/32 Linfeng_091811_SIN3A_10.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 79.18 6.20 1.00 1 3 599.67511 1797.01078 -0.53 45.11 10574 10574 MS2 31/60 Linfeng_081211_IgG_5.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 94.96 6.20 1.00 1 3 789.75861 2367.26126 -0.63 46.06 11157 11157 MS2 27/80 Linfeng_081211_IgG_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 56.06 6.20 1.00 1 3 704.68469 2112.03952 -1.07 54.83 6310 6310 MS2 31/68 Linfeng_091811_SIN3A_9.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 140.15 6.19 1.00 1 3 916.14630 2746.42435 1.83 54.36 6370 6370 MS2 31/88 Linfeng_091611_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 138.68 6.19 1.00 1 2 854.38971 1707.77214 -0.05 34.46 7640 7640 MS2 22/36 Linfeng_081211_IgG_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 112.11 6.19 1.00 1 2 998.98895 1996.97063 -0.20 39.07 9290 9290 MS2 22/32 Linfeng_081211_IgG_8.raw High ELTTEIDNNIEQISSYK 1 0 CID 106.57 6.18 1.00 1 3 666.32605 1996.96360 -3.72 39.15 4655 4655 MS2 29/64 Linfeng_091611_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 147.24 6.18 1.00 1 2 854.38745 1707.76763 -2.70 34.44 7644 7644 MS2 23/36 Linfeng_081211_IgG_6.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 112.34 6.18 1.00 1 3 694.99213 2082.96183 -1.47 36.60 4246 4246 MS2 34/64 Linfeng_091811_SIN3A_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 97.23 6.18 1.00 1 3 599.67505 1797.01059 -0.63 44.49 5256 5256 MS2 31/60 Linfeng_091811_SIN3A_6.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 110.59 6.18 1.00 1 2 854.38910 1707.77092 -0.77 34.06 7701 7701 MS2 21/36 Linfeng_081211_IgG_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 60.91 6.17 1.00 1 3 704.68774 2112.04868 3.27 54.34 12640 12640 MS2 25/68 Linfeng_081211_IgG_5.raw High NVQALEIELQSQLALK 1 0 CID 87.48 6.17 1.00 1 3 599.67413 1797.00785 -2.16 44.12 5065 5065 MS2 32/60 Linfeng_091611_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 70.25 6.17 1.00 1 4 763.91290 3052.62978 0.76 52.45 6031 6031 MS2 36/156 Linfeng_091811_SIN3A_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 53.31 6.17 1.00 1 3 963.46503 2888.38053 -2.53 47.36 5458 5458 MS2 30/104 Linfeng_091811_SIN3A_8.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 100.92 6.16 1.00 1 4 763.91357 3052.63247 1.64 52.70 6109 6109 MS2 38/156 Linfeng_091811_SIN3A_8.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 92.51 6.16 1.00 1 2 1041.98267 2082.95806 -3.28 36.41 4298 4298 MS2 22/32 Linfeng_091611_rIgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 121.27 6.16 1.00 1 3 963.46674 2888.38565 -0.76 46.41 10922 10922 MS2 28/104 Linfeng_081211_IgG_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 70.23 6.16 1.00 1 3 958.13672 2872.39560 0.93 48.31 11388 11388 MS2 28/104 Linfeng_081211_IgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 95.53 6.16 1.00 1 3 781.66290 2342.97416 -4.40 36.83 4279 4279 MS2 41/104 Linfeng_091811_SIN3A_6.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 72.36 6.15 1.00 1 3 704.68634 2112.04447 1.27 54.72 6439 6439 MS2 29/68 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 47.07 6.15 1.00 1 3 968.79919 2904.38303 0.10 41.02 9569 9569 MS2 28/104 Linfeng_081211_IgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 94.92 6.13 1.00 1 2 1452.69434 2904.38140 -0.47 41.04 9874 9874 MS2 19/52 Linfeng_081211_IgG_8.raw High NVQALEIELQSQLALK 1 0 CID 79.49 6.13 1.00 1 3 599.67371 1797.00656 -2.87 45.09 4791 4791 MS2 35/60 Linfeng_091611_rIgG_3.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 86.10 6.12 1.00 1 2 1041.98450 2082.96172 -1.53 36.71 4220 4220 MS2 22/32 Linfeng_091811_SIN3A_2.raw High ELTTEIDNNIEQISSYK 1 0 CID 88.92 6.12 1.00 1 2 998.98444 1996.96160 -4.72 35.56 3969 3969 MS2 19/32 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 88.58 6.11 1.00 1 3 599.67432 1797.00840 -1.85 44.41 5273 5273 MS2 33/60 Linfeng_091811_SIN3A_4.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 101.65 6.11 1.00 1 3 599.67334 1797.00547 -3.48 44.63 5455 5455 MS2 32/60 Linfeng_091811_SIN3A_5.raw High NVQALEIELQSQLALK 1 0 CID 104.55 6.10 1.00 1 3 599.67358 1797.00620 -3.07 45.21 5244 5244 MS2 32/60 Linfeng_091611_rIgG_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 141.16 6.09 1.00 1 2 998.98633 1996.96538 -2.83 39.60 4485 4485 MS2 23/32 Linfeng_091811_SIN3A_8.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 44.76 6.09 1.00 1 3 666.32562 1996.96231 -4.36 39.45 4777 4777 MS2 28/64 Linfeng_091811_SIN3A_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 109.32 6.07 1.00 1 4 763.91168 3052.62490 -0.84 52.38 6212 6212 MS2 35/156 Linfeng_091811_SIN3A_2.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 102.33 6.06 1.00 1 3 599.67493 1797.01023 -0.83 46.37 11221 11221 MS2 30/60 Linfeng_081211_IgG_8.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 104.74 6.06 1.00 1 3 963.46655 2888.38510 -0.95 47.78 8472 8472 MS2 30/104 Linfeng_081211_IgG_1.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 88.53 6.06 1.00 1 3 694.99176 2082.96073 -2.00 36.40 3686 3686 MS2 34/64 Linfeng_091611_rIgG_3.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 69.37 6.06 1.00 1 3 704.68732 2112.04740 2.66 54.67 6501 6501 MS2 30/68 Linfeng_091611_rIgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 66.08 6.05 1.00 1 3 968.79572 2904.37259 -3.50 41.65 4933 4933 MS2 29/104 Linfeng_091611_rIgG_5.raw High ELTTEIDNNIEQISSYK 1 0 CID 100.02 6.05 1.00 1 3 666.32703 1996.96653 -2.25 39.21 4529 4529 MS2 30/64 Linfeng_091611_rIgG_7.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 72.97 6.05 1.00 1 3 704.68658 2112.04520 1.62 54.66 6552 6552 MS2 31/68 Linfeng_091611_rIgG_4.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 83.46 6.05 1.00 1 3 704.68683 2112.04593 1.97 54.85 6319 6319 MS2 32/68 Linfeng_091811_SIN3A_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 27.28 6.03 1.00 1 4 722.85022 2888.37905 -3.04 47.26 5383 5383 MS2 30/156 Linfeng_091811_SIN3A_7.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 71.98 6.02 1.00 1 3 704.68622 2112.04410 1.10 54.70 6459 6459 MS2 30/68 Linfeng_091811_SIN3A_1.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 113.96 6.01 1.00 1 2 1106.55444 2212.10161 1.62 40.24 9927 9927 MS2 23/36 Linfeng_081211_IgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 92.65 6.01 1.00 1 2 1452.68896 2904.37065 -4.17 41.72 4795 4795 MS2 19/52 Linfeng_091611_rIgG_1.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 150.00 6.01 1.00 1 2 775.34143 1549.67558 -1.11 20.70 3039 3039 MS2 25/38 Linfeng_081211_IgG_5.raw High NVQALEIELQSQLALK 1 0 CID 91.80 6.00 1.00 1 2 899.00665 1797.00603 -3.17 44.18 5112 5112 MS2 24/30 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 76.54 6.00 1.00 1 4 718.85309 2872.39052 -0.83 49.03 5795 5795 MS2 35/156 Linfeng_091811_SIN3A_2.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 115.19 6.00 1.00 1 2 998.98810 1996.96892 -1.05 40.00 9836 9836 MS2 20/32 Linfeng_081211_IgG_3.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 112.77 5.99 1.00 1 2 1041.98438 2082.96147 -1.64 36.59 8502 8502 MS2 22/32 Linfeng_081211_IgG_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 41.76 5.98 1.00 1 3 968.80078 2904.38779 1.74 40.98 9743 9743 MS2 25/104 Linfeng_081211_IgG_10.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 83.98 5.97 1.00 1 2 899.00867 1797.01006 -0.93 44.02 10285 10285 MS2 22/30 Linfeng_081211_IgG_5.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 111.67 5.97 1.00 1 3 666.32642 1996.96469 -3.17 39.28 4592 4592 MS2 32/64 Linfeng_091811_SIN3A_3.raw High ELTTEIDNNIEQISSYK 1 0 CID 78.80 5.96 1.00 1 2 998.98590 1996.96453 -3.25 35.55 3577 3577 MS2 16/32 Linfeng_091611_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 199.18 5.95 1.00 1 2 1171.99561 2342.98393 -0.23 37.10 8515 8515 MS2 23/52 Linfeng_081211_IgG_6.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 83.89 5.95 1.00 1 3 599.67432 1797.00840 -1.85 45.46 5374 5374 MS2 30/60 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK 1 0 CID 125.54 5.95 1.00 1 2 998.98621 1996.96514 -2.95 39.38 4630 4630 MS2 21/32 Linfeng_091611_rIgG_6.raw High ADLEMQIESLTEELAYLK 1 0 CID 91.29 5.95 1.00 1 3 699.35535 2096.05149 2.21 54.59 6531 6531 MS2 30/68 Linfeng_091611_rIgG_5.raw High ELTTEIDNNIEQISSYK 1 0 CID 76.28 5.94 1.00 1 3 666.32709 1996.96671 -2.16 39.27 4216 4216 MS2 31/64 Linfeng_091611_rIgG_10.raw High SGGGGGGGGcGGGGGVSSLR 1 0 CID C10(Carbamidomethyl) 145.40 5.94 1.00 1 2 775.34131 1549.67534 -1.27 19.45 1828 1828 MS2 22/38 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 42.79 5.94 1.00 1 3 968.79614 2904.37387 -3.06 41.68 4894 4894 MS2 27/104 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 63.73 5.94 1.00 1 3 963.46863 2888.39133 1.21 43.62 10541 10541 MS2 31/104 Linfeng_081211_IgG_8.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR 1 0 CID C7(Carbamidomethyl) 65.95 5.94 1.00 1 3 781.66382 2342.97690 -3.23 36.49 3697 3697 MS2 34/104 Linfeng_091611_rIgG_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 77.35 5.92 1.00 1 3 666.32843 1996.97074 -0.14 39.07 9291 9291 MS2 27/64 Linfeng_081211_IgG_8.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 98.67 5.92 1.00 1 2 1041.98193 2082.95659 -3.99 36.73 4413 4413 MS2 22/32 Linfeng_091811_SIN3A_5.raw High SKELTTEIDNNIEQISSYK 1 0 CID 24.42 5.92 1.00 1 3 738.03632 2212.09439 -1.64 32.73 3620 3620 MS2 27/72 Linfeng_091611_rIgG_2.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 93.71 5.91 1.00 1 2 998.98944 1996.97161 0.29 39.25 9025 9025 MS2 21/32 Linfeng_081211_IgG_4.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 70.25 5.91 1.00 1 3 704.68616 2112.04392 1.01 54.70 6104 6104 MS2 27/68 Linfeng_091611_rIgG_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 131.13 5.90 1.00 1 2 998.98914 1996.97099 -0.01 39.61 9276 9276 MS2 22/32 Linfeng_081211_IgG_6.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 108.50 5.90 1.00 1 2 1041.98328 2082.95928 -2.70 36.90 4302 4302 MS2 21/32 Linfeng_091811_SIN3A_4.raw High YcVQLSQIQAQISALEEQLQQIR 1 0 CID C2(Carbamidomethyl) 137.14 5.90 1.00 1 3 916.14612 2746.42380 1.63 54.46 6375 6375 MS2 32/88 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 68.94 5.88 1.00 1 2 998.98901 1996.97075 -0.14 40.05 6229 6229 MS2 17/32 Linfeng_081211_IgG_1.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 84.58 5.88 1.00 1 2 1056.52551 2112.04375 0.93 54.82 6474 6474 MS2 16/34 Linfeng_091811_SIN3A_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 101.82 5.87 1.00 1 4 763.91266 3052.62880 0.44 52.65 6032 6032 MS2 37/156 Linfeng_091811_SIN3A_7.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 56.12 5.86 1.00 1 3 704.68671 2112.04557 1.79 54.66 6540 6540 MS2 28/68 Linfeng_091611_rIgG_5.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 68.40 5.86 1.00 1 3 666.32587 1996.96305 -3.99 39.34 4563 4563 MS2 28/64 Linfeng_091811_SIN3A_2.raw High ELTTEIDNNIEQISSYK 1 0 CID 108.25 5.86 1.00 1 3 666.32635 1996.96451 -3.26 39.10 4030 4030 MS2 30/64 Linfeng_091611_rIgG_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 97.40 5.86 1.00 1 3 666.32587 1996.96305 -3.99 39.49 4634 4634 MS2 30/64 Linfeng_091811_SIN3A_4.raw High NVQALEIELQSQLALK 1 0 CID 81.50 5.85 1.00 1 2 899.00806 1797.00884 -1.61 44.35 5103 5103 MS2 20/30 Linfeng_091611_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 137.37 5.84 1.00 1 2 854.38879 1707.77031 -1.12 34.27 7470 7470 MS2 22/36 Linfeng_081211_IgG_4.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 75.19 5.84 1.00 1 3 704.68707 2112.04667 2.31 54.64 6317 6317 MS2 27/68 Linfeng_091611_rIgG_2.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 97.86 5.84 1.00 1 2 1041.98267 2082.95806 -3.28 36.85 4281 4281 MS2 22/32 Linfeng_091811_SIN3A_6.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 97.88 5.83 1.00 1 2 1041.98450 2082.96172 -1.53 36.51 3699 3699 MS2 20/32 Linfeng_091611_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 80.28 5.83 1.00 1 4 763.91290 3052.62978 0.76 52.24 6117 6117 MS2 37/156 Linfeng_091611_rIgG_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 57.17 5.83 1.00 1 3 781.66583 2342.98294 -0.65 36.97 8474 8474 MS2 28/104 Linfeng_081211_IgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 74.36 5.80 1.00 1 4 763.91321 3052.63100 1.16 52.34 5846 5846 MS2 37/156 Linfeng_091611_rIgG_10.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 76.58 5.80 1.00 1 3 704.68475 2112.03971 -0.98 54.78 6709 6709 MS2 26/68 Linfeng_091811_SIN3A_5.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 107.26 5.80 1.00 1 3 666.32654 1996.96506 -2.98 39.50 4624 4624 MS2 29/64 Linfeng_091811_SIN3A_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 148.41 5.80 1.00 1 2 1171.99597 2342.98467 0.09 37.61 9055 9055 MS2 25/52 Linfeng_081211_IgG_3.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 105.78 5.79 1.00 1 3 694.99243 2082.96274 -1.03 36.57 8152 8152 MS2 26/64 Linfeng_081211_IgG_4.raw High YcVQLSQIQAQISALEEQLQQIR IPI:IPI00009865.4 1 1 CID C2(Carbamidomethyl) 100.17 5.79 1.00 1 2 1373.71729 2746.42729 2.90 53.79 12540 12540 MS2 21/44 Linfeng_081211_IgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 62.51 5.79 1.00 1 4 763.91388 3052.63369 2.04 52.49 6169 6169 MS2 34/156 Linfeng_091811_SIN3A_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 91.28 5.78 1.00 1 2 1041.98438 2082.96147 -1.64 36.50 8127 8127 MS2 22/32 Linfeng_081211_IgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 204.72 5.78 1.00 1 2 1171.99548 2342.98369 -0.33 36.41 8172 8172 MS2 22/52 Linfeng_081211_IgG_10.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 116.36 5.78 1.00 1 3 694.99237 2082.96256 -1.12 36.85 8422 8422 MS2 30/64 Linfeng_081211_IgG_7.raw High NVQALEIELQSQLALK 1 0 CID 67.19 5.76 1.00 1 2 899.00739 1797.00749 -2.35 59.29 6860 6860 MS2 22/30 Linfeng_091611_rIgG_1.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 104.99 5.76 1.00 1 3 694.99139 2082.95963 -2.53 36.67 4215 4215 MS2 32/64 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 132.98 5.76 1.00 1 4 722.85284 2888.38955 0.59 47.02 5577 5577 MS2 41/156 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 131.59 5.76 1.00 1 4 722.85181 2888.38540 -0.84 46.83 5405 5405 MS2 33/156 Linfeng_091611_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 112.71 5.74 1.00 1 2 854.38971 1707.77214 -0.05 35.11 8188 8188 MS2 21/36 Linfeng_081211_IgG_3.raw High NVQALEIELQSQLALK 1 0 CID 61.17 5.74 1.00 1 3 599.67432 1797.00840 -1.85 45.39 4987 4987 MS2 31/60 Linfeng_091611_rIgG_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 139.96 5.73 1.00 1 2 1444.69690 2888.38652 -0.45 47.14 5585 5585 MS2 19/52 Linfeng_091811_SIN3A_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 134.40 5.71 1.00 1 2 1171.99438 2342.98149 -1.27 36.62 8167 8167 MS2 21/52 Linfeng_081211_IgG_4.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 74.29 5.71 1.00 1 3 666.32819 1996.97000 -0.51 40.00 9837 9837 MS2 29/64 Linfeng_081211_IgG_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 11.06 5.71 1.00 1 3 666.32867 1996.97147 0.22 39.26 8983 8983 MS2 22/64 Linfeng_081211_IgG_5.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 60.44 5.70 1.00 1 3 738.03943 2212.10373 2.58 48.13 8554 8554 MS2 28/72 Linfeng_081211_IgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 72.93 5.69 1.00 1 3 599.67474 1797.00968 -1.14 45.43 5406 5406 MS2 31/60 Linfeng_091811_SIN3A_4.raw High SGGGGGGGGcGGGGGVSSLR 1 0 CID C10(Carbamidomethyl) 140.85 5.68 1.00 1 2 775.34100 1549.67473 -1.66 19.51 1825 1825 MS2 22/38 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 102.83 5.68 1.00 1 2 1452.69189 2904.37651 -2.15 41.87 4919 4919 MS2 19/52 Linfeng_091811_SIN3A_1.raw High NVQALEIELQSQLALK 1 0 CID 51.26 5.68 1.00 1 3 599.67395 1797.00730 -2.46 46.13 4924 4924 MS2 32/60 Linfeng_091611_rIgG_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 87.94 5.67 1.00 1 3 666.32867 1996.97147 0.22 39.25 9027 9027 MS2 29/64 Linfeng_081211_IgG_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 90.83 5.66 1.00 1 3 694.99231 2082.96238 -1.21 36.56 8146 8146 MS2 31/64 Linfeng_081211_IgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 69.54 5.65 1.00 1 4 763.91235 3052.62758 0.04 52.27 6308 6308 MS2 38/156 Linfeng_091611_rIgG_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 113.12 5.64 1.00 1 3 694.99084 2082.95798 -3.32 36.46 4217 4217 MS2 33/64 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 105.44 5.64 1.00 1 4 722.85138 2888.38369 -1.44 47.09 5551 5551 MS2 42/156 Linfeng_091811_SIN3A_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 62.56 5.63 1.00 1 4 763.91187 3052.62563 -0.60 52.58 6238 6238 MS2 36/156 Linfeng_091811_SIN3A_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 88.19 5.62 1.00 1 4 763.91504 3052.63833 3.56 52.49 6449 6449 MS2 39/156 Linfeng_091811_SIN3A_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 72.77 5.61 1.00 1 4 763.91217 3052.62685 -0.20 52.54 6102 6102 MS2 34/156 Linfeng_091811_SIN3A_9.raw High ELTTEIDNNIEQISSYK 1 0 CID 88.39 5.61 1.00 1 2 998.98730 1996.96733 -1.85 39.26 4758 4758 MS2 19/32 Linfeng_091611_rIgG_8.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 113.95 5.61 1.00 1 3 694.99115 2082.95890 -2.88 36.48 4102 4102 MS2 34/64 Linfeng_091611_rIgG_2.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 84.05 5.60 1.00 1 2 998.98907 1996.97087 -0.07 39.34 9261 9261 MS2 22/32 Linfeng_081211_IgG_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 99.13 5.60 1.00 1 3 666.32733 1996.96744 -1.79 40.23 6280 6280 MS2 28/64 Linfeng_081211_IgG_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 67.03 5.60 1.00 1 3 666.32697 1996.96634 -2.34 39.60 4539 4539 MS2 32/64 Linfeng_091811_SIN3A_9.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 115.84 5.59 1.00 1 3 963.46655 2888.38510 -0.95 48.03 5696 5696 MS2 28/104 Linfeng_091811_SIN3A_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 59.87 5.58 1.00 1 3 1018.21429 3052.62833 0.29 53.33 6364 6364 MS2 26/104 Linfeng_091611_rIgG_6.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 98.54 5.58 1.00 1 3 694.99213 2082.96183 -1.47 37.31 8942 8942 MS2 31/64 Linfeng_081211_IgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 76.26 5.58 1.00 1 3 968.79669 2904.37552 -2.49 41.52 4769 4769 MS2 29/104 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 115.13 5.56 1.00 1 4 722.85101 2888.38222 -1.94 47.12 5394 5394 MS2 43/156 Linfeng_091811_SIN3A_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 18.09 5.56 1.00 1 3 968.79791 2904.37918 -1.23 46.97 5184 5184 MS2 23/104 Linfeng_091611_rIgG_10.raw High NVQALEIELQSQLALK 1 0 CID 69.26 5.56 1.00 1 3 599.67444 1797.00876 -1.65 51.18 5547 5547 MS2 25/60 Linfeng_091611_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 113.99 5.55 1.00 1 2 854.38947 1707.77165 -0.34 34.03 7434 7434 MS2 22/36 Linfeng_081211_IgG_10.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 82.71 5.55 1.00 1 2 854.38898 1707.77068 -0.91 36.12 8540 8540 MS2 17/36 Linfeng_081211_IgG_3.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 145.40 5.54 1.00 1 2 775.34106 1549.67485 -1.58 19.74 1950 1950 MS2 22/38 Linfeng_091811_SIN3A_3.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 82.26 5.54 1.00 1 3 704.68652 2112.04502 1.53 54.81 6225 6225 MS2 31/68 Linfeng_091811_SIN3A_7.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 82.89 5.53 1.00 1 2 854.39026 1707.77324 0.59 35.64 7363 7363 MS2 22/36 Linfeng_081211_IgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 82.82 5.53 1.00 1 3 1018.21631 3052.63437 2.27 52.51 6171 6171 MS2 29/104 Linfeng_091811_SIN3A_4.raw High NVQALEIELQSQLALK 1 0 CID 67.15 5.51 1.00 1 3 599.67493 1797.01023 -0.83 45.20 5199 5199 MS2 30/60 Linfeng_091611_rIgG_9.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 136.95 5.51 1.00 1 2 775.34088 1549.67449 -1.82 20.30 3214 3214 MS2 22/38 Linfeng_081211_IgG_8.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 144.11 5.51 1.00 1 2 775.33893 1549.67058 -4.34 19.83 2101 2101 MS2 22/38 Linfeng_091811_SIN3A_5.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 142.73 5.49 1.00 1 2 775.34094 1549.67461 -1.74 19.85 1987 1987 MS2 21/38 Linfeng_091811_SIN3A_6.raw High ELTTEIDNNIEQISSYK 1 0 CID 42.43 5.49 1.00 1 3 666.32672 1996.96561 -2.71 39.42 4634 4634 MS2 29/64 Linfeng_091611_rIgG_6.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 65.75 5.48 1.00 1 3 789.75958 2367.26419 0.61 45.92 11206 11206 MS2 31/80 Linfeng_081211_IgG_6.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 116.30 5.48 1.00 1 2 1041.98523 2082.96318 -0.82 36.66 4253 4253 MS2 22/32 Linfeng_091811_SIN3A_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 61.76 5.47 1.00 1 4 763.91272 3052.62905 0.52 52.23 6146 6146 MS2 31/156 Linfeng_091611_rIgG_7.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 49.59 5.47 1.00 1 3 694.99115 2082.95890 -2.88 36.68 4276 4276 MS2 33/64 Linfeng_091611_rIgG_6.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 46.91 5.47 1.00 1 3 738.03857 2212.10117 1.42 40.15 9892 9892 MS2 28/72 Linfeng_081211_IgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 92.45 5.46 1.00 1 3 1018.21283 3052.62394 -1.15 52.27 6239 6239 MS2 28/104 Linfeng_091611_rIgG_6.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 17.43 5.45 1.00 1 3 569.92688 1707.76609 -3.60 34.25 3896 3896 MS2 31/72 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 51.25 5.44 1.00 1 3 968.79871 2904.38156 -0.41 41.02 9868 9868 MS2 26/104 Linfeng_081211_IgG_8.raw High NVQALEIELQSQLALK 1 0 CID 40.50 5.43 1.00 1 3 599.67407 1797.00766 -2.26 57.92 6608 6608 MS2 29/60 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 54.10 5.43 1.00 1 3 599.67340 1797.00565 -3.38 45.40 5409 5409 MS2 27/60 Linfeng_091611_rIgG_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 73.20 5.42 1.00 1 3 958.13287 2872.38407 -3.08 48.89 11727 11727 MS2 26/104 Linfeng_081211_IgG_8.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 54.19 5.41 1.00 1 3 738.03778 2212.09879 0.35 33.11 7151 7151 MS2 27/72 Linfeng_081211_IgG_7.raw High NVQALEIELQSQLALK 1 0 CID 43.60 5.39 1.00 1 3 599.67474 1797.00968 -1.14 49.97 6025 6025 MS2 27/60 Linfeng_091611_rIgG_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 81.26 5.39 1.00 1 2 1041.98450 2082.96172 -1.53 38.41 6598 6598 MS2 19/32 Linfeng_081211_IgG_9.raw High NVQALEIELQSQLALK 1 0 CID 61.84 5.38 1.00 1 3 599.67334 1797.00547 -3.48 47.47 5086 5086 MS2 25/60 Linfeng_091611_rIgG_3.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 60.86 5.38 1.00 1 2 1041.98608 2082.96489 0.00 44.00 7366 7366 MS2 19/32 Linfeng_081211_IgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 69.68 5.37 1.00 1 3 599.67395 1797.00730 -2.46 45.59 5393 5393 MS2 29/60 Linfeng_091811_SIN3A_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 83.47 5.36 1.00 1 3 1018.21527 3052.63126 1.25 52.18 6141 6141 MS2 24/104 Linfeng_091611_rIgG_7.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 101.68 5.34 1.00 1 2 1041.98572 2082.96416 -0.35 36.41 8173 8173 MS2 22/32 Linfeng_081211_IgG_10.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 300.00 5.34 1.00 1 2 775.34155 1549.67583 -0.95 21.47 3430 3430 MS2 22/38 Linfeng_081211_IgG_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 72.02 5.33 1.00 1 2 899.01184 1797.01641 2.61 50.38 9138 9138 MS2 19/30 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 23.31 5.33 1.00 1 3 968.79803 2904.37955 -1.10 41.37 9815 9815 MS2 27/104 Linfeng_081211_IgG_6.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 45.68 5.33 1.00 1 3 599.67627 1797.01426 1.41 54.28 6391 6391 MS2 29/60 Linfeng_091811_SIN3A_3.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 104.51 5.33 1.00 1 2 775.34320 1549.67912 1.17 20.33 3204 3204 MS2 22/38 Linfeng_081211_IgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 81.29 5.31 1.00 1 2 1444.69800 2888.38872 0.31 46.39 10919 10919 MS2 16/52 Linfeng_081211_IgG_5.raw High ELTTEIDNNIEQISSYK 1 0 CID 51.02 5.30 1.00 1 3 666.32684 1996.96598 -2.53 39.22 4451 4451 MS2 27/64 Linfeng_091611_rIgG_2.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 48.83 5.30 1.00 1 2 1041.98572 2082.96416 -0.35 42.91 7053 7053 MS2 19/32 Linfeng_081211_IgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 77.31 5.28 1.00 1 4 763.91199 3052.62612 -0.44 53.43 6262 6262 MS2 37/156 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK 1 0 CID 86.18 5.27 1.00 1 3 599.67395 1797.00730 -2.46 45.17 5427 5427 MS2 31/60 Linfeng_091611_rIgG_4.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 96.97 5.26 1.00 1 2 1106.55286 2212.09844 0.19 48.10 8547 8547 MS2 19/36 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 43.92 5.26 1.00 1 3 968.79810 2904.37973 -1.04 41.00 9484 9484 MS2 23/104 Linfeng_081211_IgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 61.31 5.26 1.00 1 4 763.91290 3052.62978 0.76 52.22 6395 6395 MS2 33/156 Linfeng_091611_rIgG_8.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 57.21 5.25 1.00 1 3 694.99164 2082.96036 -2.18 38.37 6588 6588 MS2 26/64 Linfeng_081211_IgG_9.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 141.69 5.24 1.00 1 2 775.34119 1549.67510 -1.43 19.47 1915 1915 MS2 22/38 Linfeng_091811_SIN3A_1.raw High NVQALEIELQSQLALK 1 0 CID 67.36 5.24 1.00 1 3 599.67426 1797.00821 -1.95 46.22 5373 5373 MS2 27/60 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 73.80 5.23 1.00 1 3 599.67462 1797.00931 -1.34 45.40 5371 5371 MS2 32/60 Linfeng_091811_SIN3A_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR 1 0 CID M11(Oxidation) 34.00 5.22 1.00 1 4 722.85095 2888.38198 -2.03 46.84 5634 5634 MS2 29/156 Linfeng_091611_rIgG_4.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 112.01 5.20 1.00 1 2 1041.98535 2082.96343 -0.71 36.58 8155 8155 MS2 21/32 Linfeng_081211_IgG_4.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 146.12 5.19 1.00 1 2 775.33978 1549.67229 -3.24 19.59 1895 1895 MS2 20/38 Linfeng_091811_SIN3A_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 86.97 5.19 1.00 1 3 1018.21552 3052.63199 1.49 52.62 6028 6028 MS2 31/104 Linfeng_091811_SIN3A_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 91.30 5.19 1.00 1 2 1452.69592 2904.38457 0.63 41.51 9859 9859 MS2 18/52 Linfeng_081211_IgG_6.raw High NVQALEIELQSQLALK 1 0 CID 43.68 5.17 1.00 1 3 599.67444 1797.00876 -1.65 45.20 5289 5289 MS2 27/60 Linfeng_091611_rIgG_7.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 77.51 5.16 1.00 1 2 1056.52783 2112.04839 3.13 54.34 12638 12638 MS2 22/34 Linfeng_081211_IgG_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 57.39 5.16 1.00 1 4 722.85229 2888.38735 -0.17 47.19 5592 5592 MS2 33/156 Linfeng_091811_SIN3A_1.raw High SGGGGGGGGcGGGGGVSSLR 1 0 CID C10(Carbamidomethyl) 300.00 5.15 1.00 1 2 775.34088 1549.67449 -1.82 19.55 2017 2017 MS2 24/38 Linfeng_091611_rIgG_4.raw High NVQALEIELQSQLALK 1 0 CID 47.55 5.15 1.00 1 3 599.67523 1797.01114 -0.32 54.29 5905 5905 MS2 30/60 Linfeng_091611_rIgG_3.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 70.69 5.15 1.00 1 3 704.68671 2112.04557 1.79 54.64 5950 5950 MS2 28/68 Linfeng_091611_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 92.80 5.14 1.00 1 4 763.91217 3052.62685 -0.20 52.14 5666 5666 MS2 38/156 Linfeng_091611_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR 1 0 CID 114.63 5.14 1.00 1 4 763.91235 3052.62758 0.04 52.19 6079 6079 MS2 38/156 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 33.28 5.14 1.00 1 3 599.67450 1797.00895 -1.54 52.72 6137 6137 MS2 24/60 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 51.87 5.09 1.00 1 3 599.67462 1797.00931 -1.34 45.20 5209 5209 MS2 31/60 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 49.40 5.08 1.00 1 3 599.67529 1797.01133 -0.22 53.74 6233 6233 MS2 21/60 Linfeng_091611_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 78.23 5.05 1.00 1 2 854.38947 1707.77165 -0.34 36.69 6191 6191 MS2 17/36 Linfeng_081211_IgG_9.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 108.05 5.05 1.00 1 3 781.66547 2342.98185 -1.12 36.61 8164 8164 MS2 36/104 Linfeng_081211_IgG_4.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 63.14 5.05 1.00 1 2 899.01172 1797.01616 2.47 43.89 10266 10266 MS2 19/30 Linfeng_081211_IgG_4.raw High NVQALEIELQSQLALK 1 0 CID 53.71 5.03 1.00 1 3 599.67389 1797.00711 -2.56 49.88 5386 5386 MS2 23/60 Linfeng_091611_rIgG_3.raw High ADLEmQIESLTEELAYLK 1 0 CID M5(Oxidation) 73.56 5.03 1.00 1 3 704.68640 2112.04465 1.36 54.64 6405 6405 MS2 28/68 Linfeng_091611_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 50.09 5.03 1.00 1 3 958.13580 2872.39286 -0.02 49.10 11769 11769 MS2 23/104 Linfeng_081211_IgG_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 46.66 5.02 1.00 1 4 722.85223 2888.38711 -0.25 47.17 5775 5775 MS2 30/156 Linfeng_091811_SIN3A_5.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 103.77 5.00 1.00 1 3 694.99042 2082.95670 -3.93 36.53 4270 4270 MS2 32/64 Linfeng_091611_rIgG_5.raw High VLDELTLTKADLEmQIESLTEELAYLKK 1 0 CID M14(Oxidation) 33.62 4.98 1.00 1 5 651.34821 3252.71192 -1.64 53.08 5778 5778 MS2 35/216 Linfeng_091611_rIgG_3.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 60.24 4.97 1.00 1 3 694.99152 2082.96000 -2.35 36.62 4194 4194 MS2 28/64 Linfeng_091611_rIgG_7.raw High NVQALEIELQSQLALK 1 0 CID 30.00 4.97 1.00 1 3 599.67407 1797.00766 -2.26 47.48 5494 5494 MS2 26/60 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 50.48 4.96 1.00 1 3 599.67584 1797.01297 0.70 45.36 10991 10991 MS2 23/60 Linfeng_081211_IgG_8.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 112.63 4.96 1.00 1 2 1041.98486 2082.96245 -1.17 36.85 8423 8423 MS2 23/32 Linfeng_081211_IgG_7.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 23.53 4.96 1.00 1 3 738.03864 2212.10135 1.51 44.22 7439 7439 MS2 21/72 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 39.19 4.94 1.00 1 2 1452.69751 2904.38774 1.72 40.99 9747 9747 MS2 19/52 Linfeng_081211_IgG_10.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 61.45 4.94 1.00 1 3 599.67639 1797.01462 1.61 53.96 6375 6375 MS2 25/60 Linfeng_091811_SIN3A_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 81.65 4.94 1.00 1 4 726.85181 2904.38540 0.91 41.83 10480 10480 MS2 36/156 Linfeng_081211_IgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 90.51 4.94 1.00 1 4 726.84894 2904.37392 -3.04 41.81 4912 4912 MS2 41/156 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 54.90 4.93 1.00 1 3 666.32477 1996.95975 -5.64 35.69 4116 4116 MS2 28/64 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR 1 0 CID "M11(Oxidation), M26(Oxidation)" 26.89 4.92 1.00 1 3 968.79510 2904.37076 -4.13 42.16 4583 4583 MS2 25/104 Linfeng_091611_rIgG_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 95.00 4.92 1.00 1 2 998.98767 1996.96807 -1.48 44.65 7576 7576 MS2 19/32 Linfeng_081211_IgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 33.47 4.91 1.00 1 3 599.67346 1797.00583 -3.28 45.58 5361 5361 MS2 30/60 Linfeng_091811_SIN3A_2.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 69.72 4.91 1.00 1 3 599.67529 1797.01133 -0.22 46.15 10861 10861 MS2 25/60 Linfeng_081211_IgG_5.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 36.99 4.90 1.00 1 3 738.03821 2212.10007 0.93 40.24 9479 9479 MS2 26/72 Linfeng_081211_IgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 65.07 4.89 1.00 1 4 726.85150 2904.38418 0.49 41.09 9589 9589 MS2 36/156 Linfeng_081211_IgG_4.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 69.90 4.89 1.00 1 3 599.67413 1797.00785 -2.16 45.71 5189 5189 MS2 29/60 Linfeng_091811_SIN3A_7.raw High NVQALEIELQSQLALK 1 0 CID 82.18 4.88 1.00 1 3 599.67450 1797.00895 -1.54 52.22 5677 5677 MS2 24/60 Linfeng_091611_rIgG_3.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 26.15 4.88 1.00 1 2 1184.13599 2367.26470 0.82 50.41 9144 9144 MS2 17/40 Linfeng_081211_IgG_1.raw High NVQALEIELQSQLALK 1 0 CID 83.83 4.88 1.00 1 3 599.67401 1797.00748 -2.36 45.20 5514 5514 MS2 28/60 Linfeng_091611_rIgG_8.raw High VLDELTLTKADLEmQIESLTEELAYLKK IPI:IPI00009865.4 1 1 CID M14(Oxidation) 132.80 4.87 1.00 1 4 813.93396 3252.71401 -1.00 53.24 6305 6305 MS2 38/162 Linfeng_091811_SIN3A_2.raw High NVQALEIELQSQLALK 1 0 CID 56.96 4.86 1.00 1 3 599.67389 1797.00711 -2.56 47.33 5508 5508 MS2 28/60 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 38.61 4.86 1.00 1 3 599.67407 1797.00766 -2.26 59.52 7185 7185 MS2 25/60 Linfeng_091811_SIN3A_5.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 89.64 4.85 1.00 1 3 694.99298 2082.96439 -0.24 36.44 8182 8182 MS2 26/64 Linfeng_081211_IgG_10.raw High ELTTEIDNNIEQISSYK 1 0 CID 117.28 4.85 1.00 1 2 998.98468 1996.96208 -4.48 35.66 3997 3997 MS2 21/32 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 89.74 4.84 1.00 1 2 899.01056 1797.01384 1.18 45.21 11590 11590 MS2 20/30 Linfeng_081211_IgG_3.raw High NVQALEIELQSQLALK 1 0 CID 46.16 4.84 1.00 1 3 599.67358 1797.00620 -3.07 57.95 6745 6745 MS2 26/60 Linfeng_091611_rIgG_1.raw High NVQALEIELQSQLALK 1 0 CID 41.66 4.83 1.00 1 3 599.67468 1797.00949 -1.24 47.81 5515 5515 MS2 28/60 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 57.96 4.83 1.00 1 3 599.67407 1797.00766 -2.26 47.52 5632 5632 MS2 25/60 Linfeng_091811_SIN3A_1.raw High NVQALEIELQSQLALK 1 0 CID 83.67 4.82 1.00 1 2 899.00885 1797.01042 -0.72 58.61 6659 6659 MS2 19/30 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 6.67 4.82 1.00 1 3 963.46802 2888.38950 0.58 43.93 10606 10606 MS2 28/104 Linfeng_081211_IgG_6.raw High ADLEMQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID 81.06 4.81 1.00 1 2 1048.53003 2096.05278 2.82 54.29 12625 12625 MS2 23/34 Linfeng_081211_IgG_5.raw High NVQALEIELQSQLALK 1 0 CID 33.58 4.81 1.00 1 3 599.67487 1797.01004 -0.93 49.54 5750 5750 MS2 26/60 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 44.41 4.81 1.00 1 3 599.67639 1797.01462 1.61 53.60 6192 6192 MS2 26/60 Linfeng_091611_rIgG_9.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 31.61 4.78 1.00 1 3 738.03552 2212.09201 -2.72 32.80 3738 3738 MS2 25/72 Linfeng_091811_SIN3A_1.raw High NVQALEIELQSQLALK 1 0 CID 65.75 4.77 1.00 1 3 599.67578 1797.01279 0.59 45.72 5436 5436 MS2 24/60 Linfeng_091611_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 91.87 4.76 1.00 1 3 1018.21637 3052.63456 2.33 52.10 12219 12219 MS2 28/104 Linfeng_081211_IgG_5.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 55.05 4.75 1.00 1 2 683.32104 1365.63481 -3.34 23.30 2454 2454 MS2 17/20 Linfeng_091811_SIN3A_1.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 45.45 4.74 1.00 1 2 683.32202 1365.63677 -1.91 27.90 3700 3700 MS2 17/20 Linfeng_081211_IgG_1.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 60.33 4.74 1.00 1 2 854.39075 1707.77422 1.16 37.94 9175 9175 MS2 17/36 Linfeng_081211_IgG_3.raw High SQYEQLAEQNR 1 0 CID 53.47 4.73 1.00 1 2 683.32117 1365.63506 -3.16 23.34 2629 2629 MS2 17/20 Linfeng_091611_rIgG_8.raw High NVQALEIELQSQLALK 1 0 CID 42.62 4.73 1.00 1 3 599.67523 1797.01114 -0.32 51.46 5952 5952 MS2 22/60 Linfeng_091611_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 8.03 4.73 1.00 1 3 569.92792 1707.76920 -1.78 34.15 7737 7737 MS2 30/72 Linfeng_081211_IgG_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 91.26 4.73 1.00 1 4 726.85162 2904.38466 0.66 41.50 9858 9858 MS2 33/156 Linfeng_081211_IgG_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID M26(Oxidation) 2.24 4.73 1.00 1 3 963.46771 2888.38858 0.26 43.51 10606 10606 MS2 22/104 Linfeng_081211_IgG_7.raw High SQYEQLAEQNR 1 0 CID 55.28 4.73 1.00 1 2 683.32178 1365.63628 -2.27 23.53 2515 2515 MS2 17/20 Linfeng_091611_rIgG_6.raw High SQYEQLAEQNR 1 0 CID 50.52 4.72 1.00 1 2 683.32123 1365.63518 -3.07 23.39 2534 2534 MS2 17/20 Linfeng_091611_rIgG_5.raw High NVQALEIELQSQLALK 1 0 CID 37.09 4.71 1.00 1 3 599.67670 1797.01554 2.12 54.24 6509 6509 MS2 25/60 Linfeng_091611_rIgG_4.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 44.41 4.71 1.00 1 2 683.32153 1365.63579 -2.62 23.62 2525 2525 MS2 17/20 Linfeng_091811_SIN3A_4.raw High SQYEQLAEQNR 1 0 CID 55.74 4.71 1.00 1 2 683.32141 1365.63555 -2.80 23.22 2351 2351 MS2 17/20 Linfeng_091611_rIgG_1.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 49.54 4.71 1.00 1 2 683.32220 1365.63713 -1.64 26.90 3543 3543 MS2 17/20 Linfeng_081211_IgG_1.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 51.72 4.71 1.00 1 2 683.32080 1365.63432 -3.70 23.65 2521 2521 MS2 17/20 Linfeng_091811_SIN3A_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 75.27 4.70 1.00 1 4 718.85364 2872.39272 -0.07 49.01 5818 5818 MS2 33/156 Linfeng_091811_SIN3A_1.raw High SQYEQLAEQNR 1 0 CID 49.91 4.69 1.00 1 2 683.32202 1365.63677 -1.91 23.28 2357 2357 MS2 17/20 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK 1 0 CID 17.82 4.68 1.00 1 3 599.67499 1797.01041 -0.73 51.98 6275 6275 MS2 26/60 Linfeng_091611_rIgG_4.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 49.46 4.68 1.00 1 2 683.32074 1365.63420 -3.78 23.61 2371 2371 MS2 17/20 Linfeng_091811_SIN3A_8.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 55.73 4.67 1.00 1 3 599.67395 1797.00730 -2.46 45.70 5305 5305 MS2 24/60 Linfeng_091811_SIN3A_9.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 60.99 4.67 1.00 1 2 683.32404 1365.64079 1.04 28.91 3882 3882 MS2 17/20 Linfeng_081211_IgG_1.raw High NVQALEIELQSQLALK 1 0 CID 42.30 4.66 1.00 1 3 599.67371 1797.00656 -2.87 57.38 6213 6213 MS2 26/60 Linfeng_091611_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR IPI:IPI00009865.4 1 1 CID C7(Carbamidomethyl) 73.84 4.66 1.00 1 3 781.66473 2342.97965 -2.06 36.69 8536 8536 MS2 31/104 Linfeng_081211_IgG_8.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 57.27 4.66 1.00 1 2 683.32135 1365.63542 -2.89 23.55 2484 2484 MS2 17/20 Linfeng_091811_SIN3A_3.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 20.37 4.65 1.00 1 3 569.92932 1707.77341 0.69 34.55 7673 7673 MS2 29/72 Linfeng_081211_IgG_7.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 147.24 4.64 1.00 1 2 775.34113 1549.67497 -1.50 20.55 3032 3032 MS2 20/38 Linfeng_081211_IgG_4.raw High SQYEQLAEQNR 1 0 CID 55.55 4.64 1.00 1 2 683.32190 1365.63652 -2.09 23.33 2436 2436 MS2 17/20 Linfeng_091611_rIgG_7.raw High ALEESNYELEGK 1 0 CID 84.52 4.63 1.00 1 2 691.32385 1381.64043 -5.64 26.08 2927 2927 MS2 18/22 Linfeng_091611_rIgG_4.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 57.52 4.63 1.00 1 2 683.32019 1365.63310 -4.59 23.53 2303 2303 MS2 17/20 Linfeng_091811_SIN3A_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 23.12 4.63 1.00 1 3 963.47076 2888.39774 3.43 46.12 11214 11214 MS2 27/104 Linfeng_081211_IgG_10.raw High ALEESNYELEGK 1 0 CID 92.92 4.63 1.00 1 2 691.32483 1381.64238 -4.23 26.23 2918 2918 MS2 18/22 Linfeng_091611_rIgG_5.raw High NVQALEIELQSQLALK 1 0 CID 60.40 4.62 1.00 1 3 599.67316 1797.00492 -3.79 58.42 6316 6316 MS2 27/60 Linfeng_091611_rIgG_3.raw High NVQALEIELQSQLALK 1 0 CID 46.33 4.62 1.00 1 3 599.67450 1797.00895 -1.54 49.34 5696 5696 MS2 27/60 Linfeng_091611_rIgG_9.raw High ALEESNYELEGK 1 0 CID 80.18 4.61 1.00 1 2 691.32391 1381.64055 -5.55 26.07 2737 2737 MS2 18/22 Linfeng_091611_rIgG_1.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 60.55 4.61 1.00 1 2 683.32178 1365.63628 -2.27 23.59 2426 2426 MS2 17/20 Linfeng_091811_SIN3A_9.raw High NQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 7.72 4.60 1.00 1 3 789.75818 2367.25998 -1.17 45.00 10496 10496 MS2 22/80 Linfeng_081211_IgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 19.71 4.60 1.00 1 3 963.46954 2888.39408 2.16 46.90 11467 11467 MS2 25/104 Linfeng_081211_IgG_6.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 49.30 4.59 1.00 1 2 683.32019 1365.63310 -4.59 23.44 2425 2425 MS2 17/20 Linfeng_091811_SIN3A_2.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 46.14 4.59 1.00 1 2 683.32245 1365.63762 -1.28 23.84 4258 4258 MS2 17/20 Linfeng_081211_IgG_10.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 60.26 4.59 1.00 1 2 854.38965 1707.77202 -0.12 36.99 8481 8481 MS2 16/36 Linfeng_081211_IgG_6.raw High NVQALEIELQSQLALK 1 0 CID 58.39 4.57 1.00 1 3 599.67542 1797.01169 -0.02 53.23 5797 5797 MS2 26/60 Linfeng_091611_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 8.35 4.57 1.00 1 3 569.92993 1707.77524 1.76 35.43 8302 8302 MS2 25/72 Linfeng_081211_IgG_3.raw High NVQALEIELQSQLALK 1 0 CID 21.99 4.56 1.00 1 3 599.67474 1797.00968 -1.14 53.13 6402 6402 MS2 22/60 Linfeng_091611_rIgG_4.raw High LKYENEVALR 1 0 CID 36.67 4.55 1.00 1 3 412.22998 1234.67539 -2.97 24.99 2594 2594 MS2 22/36 Linfeng_091611_rIgG_9.raw High NVQALEIELQSQLALK 1 0 CID 74.60 4.55 1.00 1 3 599.67499 1797.01041 -0.73 50.41 5828 5828 MS2 25/60 Linfeng_091611_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 6.51 4.55 1.00 1 3 569.92712 1707.76682 -3.17 34.17 3926 3926 MS2 26/72 Linfeng_091811_SIN3A_3.raw High ALEESNYELEGK 1 0 CID 78.00 4.55 1.00 1 2 691.32349 1381.63970 -6.17 26.15 2749 2749 MS2 18/22 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 35.14 4.55 1.00 1 4 726.85193 2904.38588 1.08 45.99 7981 7981 MS2 37/156 Linfeng_081211_IgG_1.raw High SQYEQLAEQNR 1 0 CID 55.52 4.55 1.00 1 2 683.32135 1365.63542 -2.89 23.29 2352 2352 MS2 17/20 Linfeng_091611_rIgG_2.raw High VLDELTLTKADLEmQIESLTEELAYLKK 1 0 CID M14(Oxidation) 79.19 4.54 1.00 1 4 813.93518 3252.71889 0.50 52.99 5767 5767 MS2 35/162 Linfeng_091611_rIgG_3.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 100.71 4.54 1.00 1 2 998.99194 1996.97661 2.80 36.44 7581 7581 MS2 18/32 Linfeng_081211_IgG_2.raw High QSLEASLAETEGR 1 0 CID 91.35 4.54 1.00 1 2 695.84186 1390.67644 -3.23 30.29 3498 3498 MS2 22/24 Linfeng_091611_rIgG_4.raw High IRLENEIQTYR 1 0 CID 69.99 4.54 1.00 1 2 717.88702 1434.76677 -2.25 28.10 3007 3007 MS2 16/20 Linfeng_091611_rIgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 78.14 4.54 1.00 1 2 691.32544 1381.64360 -3.34 26.57 5156 5156 MS2 18/22 Linfeng_081211_IgG_8.raw High IRLENEIQTYR 1 0 CID 60.80 4.54 1.00 1 2 717.88647 1434.76567 -3.02 28.25 3031 3031 MS2 17/20 Linfeng_091611_rIgG_2.raw High NVQALEIELQSQLALK 1 0 CID 46.26 4.53 1.00 1 3 599.67462 1797.00931 -1.34 51.00 5684 5684 MS2 27/60 Linfeng_091611_rIgG_10.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 50.48 4.53 1.00 1 2 683.32037 1365.63347 -4.32 23.52 2616 2616 MS2 17/20 Linfeng_091811_SIN3A_5.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 93.66 4.53 1.00 1 2 695.84467 1390.68205 0.81 30.82 6342 6342 MS2 20/24 Linfeng_081211_IgG_4.raw High QSLEASLAETEGR 1 0 CID 94.99 4.53 1.00 1 2 695.84259 1390.67790 -2.18 30.58 3478 3478 MS2 21/24 Linfeng_091611_rIgG_6.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 53.67 4.53 1.00 1 2 717.88776 1434.76824 -1.23 29.02 5909 5909 MS2 15/20 Linfeng_081211_IgG_8.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 33.58 4.53 1.00 1 3 599.67456 1797.00913 -1.44 45.63 5206 5206 MS2 25/60 Linfeng_091811_SIN3A_10.raw High SQYEQLAEQNR 1 0 CID 51.61 4.53 1.00 1 2 683.32098 1365.63469 -3.43 23.31 2542 2542 MS2 17/20 Linfeng_091611_rIgG_4.raw High ALEESNYELEGK 1 0 CID 55.84 4.53 1.00 1 2 691.32458 1381.64189 -4.58 26.17 2823 2823 MS2 18/22 Linfeng_091611_rIgG_7.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 9.30 4.52 1.00 1 3 412.23035 1234.67649 -2.09 26.04 4835 4835 MS2 20/36 Linfeng_081211_IgG_7.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 61.18 4.51 1.00 1 3 599.67535 1797.01151 -0.12 46.29 5484 5484 MS2 27/60 Linfeng_091811_SIN3A_3.raw High AETEcQNTEYQQLLDIK 1 0 CID C5(Carbamidomethyl) 86.18 4.51 1.00 1 2 1041.98254 2082.95781 -3.40 36.70 4293 4293 MS2 18/32 Linfeng_091611_rIgG_5.raw High SKELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 100.07 4.50 1.00 1 3 738.03864 2212.10135 1.51 32.85 7020 7020 MS2 25/72 Linfeng_081211_IgG_4.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 49.14 4.50 1.00 1 3 412.23160 1234.68024 0.96 25.93 4797 4797 MS2 19/36 Linfeng_081211_IgG_4.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 61.40 4.49 1.00 1 2 899.01172 1797.01616 2.47 44.26 10858 10858 MS2 18/30 Linfeng_081211_IgG_7.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 46.39 4.49 1.00 1 2 683.32172 1365.63616 -2.35 23.54 4196 4196 MS2 17/20 Linfeng_081211_IgG_6.raw High ALEESNYELEGK 1 0 CID 79.90 4.49 1.00 1 2 691.32404 1381.64079 -5.38 26.35 2905 2905 MS2 18/22 Linfeng_091611_rIgG_6.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 107.56 4.48 1.00 1 2 695.84198 1390.67668 -3.05 30.72 3503 3503 MS2 22/24 Linfeng_091811_SIN3A_4.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 99.02 4.48 1.00 1 2 695.84229 1390.67729 -2.62 30.69 3259 3259 MS2 22/24 Linfeng_091811_SIN3A_7.raw High IRLENEIQTYR 1 0 CID 61.75 4.46 1.00 1 2 717.88763 1434.76799 -1.40 28.22 3021 3021 MS2 16/20 Linfeng_091611_rIgG_9.raw High QSLEASLAETEGR 1 0 CID 123.25 4.46 1.00 1 2 695.84137 1390.67546 -3.93 30.39 3470 3470 MS2 22/24 Linfeng_091611_rIgG_5.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 82.57 4.46 1.00 1 2 695.84198 1390.67668 -3.05 30.53 3449 3449 MS2 21/24 Linfeng_091811_SIN3A_3.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 153.53 4.45 1.00 1 2 775.34149 1549.67571 -1.03 20.58 3232 3232 MS2 23/38 Linfeng_081211_IgG_10.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 87.72 4.45 1.00 1 2 691.32367 1381.64006 -5.91 26.41 2749 2749 MS2 18/22 Linfeng_091811_SIN3A_8.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 64.76 4.45 1.00 1 2 717.88550 1434.76372 -4.38 28.47 3301 3301 MS2 17/20 Linfeng_091811_SIN3A_5.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 56.51 4.45 1.00 1 2 683.32269 1365.63811 -0.92 25.88 3360 3360 MS2 17/20 Linfeng_081211_IgG_1.raw High SLLEGEGSSGGGGR 1 0 CID 72.87 4.44 1.00 1 2 631.80023 1262.59319 -3.19 22.64 2533 2533 MS2 21/26 Linfeng_091611_rIgG_8.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 76.65 4.43 1.00 1 2 691.32379 1381.64031 -5.73 26.37 2674 2674 MS2 18/22 Linfeng_091811_SIN3A_7.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 52.19 4.43 1.00 1 2 683.32233 1365.63738 -1.46 23.50 2280 2280 MS2 17/20 Linfeng_091811_SIN3A_7.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 106.47 4.43 1.00 1 2 695.84186 1390.67644 -3.23 30.66 3420 3420 MS2 22/24 Linfeng_091811_SIN3A_2.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 55.41 4.43 1.00 1 2 717.88605 1434.76482 -3.61 28.52 2991 2991 MS2 16/20 Linfeng_091811_SIN3A_10.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 32.37 4.43 1.00 1 3 599.67395 1797.00730 -2.46 57.96 6779 6779 MS2 26/60 Linfeng_091811_SIN3A_2.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 62.58 4.42 1.00 1 2 691.32306 1381.63884 -6.79 26.42 2901 2901 MS2 18/22 Linfeng_091811_SIN3A_6.raw High IRLENEIQTYR 1 0 CID 59.88 4.42 1.00 1 2 717.88690 1434.76653 -2.42 28.15 2638 2638 MS2 17/20 Linfeng_091611_rIgG_3.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 49.23 4.42 1.00 1 2 683.32233 1365.63738 -1.46 23.37 4184 4184 MS2 17/20 Linfeng_081211_IgG_8.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 62.35 4.42 1.00 1 2 717.88702 1434.76677 -2.25 28.39 3158 3158 MS2 16/20 Linfeng_091811_SIN3A_3.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 52.42 4.42 1.00 1 2 683.32275 1365.63823 -0.83 24.10 4192 4192 MS2 17/20 Linfeng_081211_IgG_7.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 27.04 4.41 1.00 1 3 412.22992 1234.67521 -3.12 25.29 2663 2663 MS2 21/36 Linfeng_091811_SIN3A_9.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 66.63 4.41 1.00 1 2 631.80096 1262.59465 -2.03 28.53 3809 3809 MS2 20/26 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 84.17 4.41 1.00 1 2 1452.69751 2904.38774 1.72 41.06 9579 9579 MS2 17/52 Linfeng_081211_IgG_4.raw High SLLEGEGSSGGGGR 1 0 CID 77.06 4.41 1.00 1 2 631.80042 1262.59355 -2.90 22.66 2342 2342 MS2 21/26 Linfeng_091611_rIgG_7.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 86.36 4.41 1.00 1 2 631.80145 1262.59563 -1.25 24.93 4253 4253 MS2 21/26 Linfeng_081211_IgG_2.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 144.11 4.41 1.00 1 2 775.34302 1549.67876 0.94 21.69 3247 3247 MS2 18/38 Linfeng_081211_IgG_2.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 58.79 4.40 1.00 1 2 717.88599 1434.76470 -3.70 28.27 3130 3130 MS2 17/20 Linfeng_091811_SIN3A_1.raw High IRLENEIQTYR 1 0 CID 60.27 4.40 1.00 1 2 717.88721 1434.76714 -2.00 28.38 3180 3180 MS2 16/20 Linfeng_091611_rIgG_6.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 1.00 4.39 1.00 1 3 569.92841 1707.77066 -0.92 42.32 6880 6880 MS2 26/72 Linfeng_081211_IgG_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 43.90 4.39 1.00 1 2 1452.69543 2904.38359 0.29 41.83 10481 10481 MS2 16/52 Linfeng_081211_IgG_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 69.98 4.39 1.00 1 3 599.67487 1797.01004 -0.93 57.99 6640 6640 MS2 23/60 Linfeng_091811_SIN3A_8.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 83.37 4.39 1.00 1 2 631.79871 1262.59014 -5.60 22.77 2511 2511 MS2 21/26 Linfeng_091811_SIN3A_5.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 61.52 4.39 1.00 1 2 691.32526 1381.64324 -3.61 28.04 5231 5231 MS2 18/22 Linfeng_081211_IgG_2.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 48.22 4.39 1.00 1 3 694.99329 2082.96531 0.20 42.89 7045 7045 MS2 22/64 Linfeng_081211_IgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 80.52 4.38 1.00 1 2 691.32367 1381.64006 -5.91 26.43 2701 2701 MS2 18/22 Linfeng_091811_SIN3A_10.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 88.22 4.37 1.00 1 3 694.99097 2082.95835 -3.14 36.82 4277 4277 MS2 32/64 Linfeng_091811_SIN3A_6.raw High SQYEQLAEQNR 1 0 CID 54.37 4.37 1.00 1 2 683.32361 1365.63994 0.42 23.24 1984 1984 MS2 17/20 Linfeng_091611_rIgG_3.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 27.08 4.37 1.00 1 3 599.67639 1797.01462 1.61 47.48 11474 11474 MS2 19/60 Linfeng_081211_IgG_8.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 90.51 4.37 1.00 1 2 691.32758 1381.64787 -0.25 31.93 4505 4505 MS2 18/22 Linfeng_081211_IgG_1.raw High ALEESNYELEGK 1 0 CID 83.42 4.37 1.00 1 2 691.32428 1381.64128 -5.02 26.17 3021 3021 MS2 18/22 Linfeng_091611_rIgG_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 43.47 4.37 1.00 1 3 963.46735 2888.38749 -0.12 46.48 11463 11463 MS2 18/104 Linfeng_081211_IgG_7.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 33.57 4.37 1.00 1 3 412.22958 1234.67420 -3.94 25.25 2591 2591 MS2 21/36 Linfeng_091811_SIN3A_8.raw High SLLEGEGSSGGGGR 1 0 CID 69.76 4.37 1.00 1 2 631.79932 1262.59136 -4.64 22.60 2443 2443 MS2 21/26 Linfeng_091611_rIgG_4.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 74.04 4.36 1.00 1 2 631.80042 1262.59355 -2.90 22.91 2328 2328 MS2 21/26 Linfeng_091811_SIN3A_9.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 111.11 4.36 1.00 1 2 695.84222 1390.67717 -2.70 30.42 3424 3424 MS2 22/24 Linfeng_091811_SIN3A_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 80.08 4.36 1.00 1 3 968.79950 2904.38395 0.41 41.78 9051 9051 MS2 27/104 Linfeng_081211_IgG_2.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 79.04 4.36 1.00 1 2 691.32410 1381.64092 -5.29 26.34 2830 2830 MS2 18/22 Linfeng_091811_SIN3A_2.raw High ALEESNYELEGK 1 0 CID 66.94 4.36 1.00 1 2 691.32635 1381.64543 -2.02 26.13 2533 2533 MS2 18/22 Linfeng_091611_rIgG_10.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 113.33 4.35 1.00 1 2 695.84192 1390.67656 -3.14 30.73 3488 3488 MS2 20/24 Linfeng_091811_SIN3A_6.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 86.99 4.34 1.00 1 2 691.32599 1381.64470 -2.55 26.76 5077 5077 MS2 18/22 Linfeng_081211_IgG_6.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 73.82 4.34 1.00 1 3 666.32703 1996.96653 -2.25 39.57 9262 9262 MS2 26/64 Linfeng_081211_IgG_6.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 46.96 4.34 1.00 1 3 666.32855 1996.97110 0.04 35.60 7882 7882 MS2 25/64 Linfeng_081211_IgG_4.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 59.15 4.34 1.00 1 2 683.32281 1365.63835 -0.75 29.53 6099 6099 MS2 16/20 Linfeng_081211_IgG_3.raw High SLLEGEGSSGGGGR 1 0 CID 74.26 4.34 1.00 1 2 631.80048 1262.59368 -2.80 22.78 2411 2411 MS2 21/26 Linfeng_091611_rIgG_6.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 47.29 4.33 1.00 1 3 599.67487 1797.01004 -0.93 49.74 5883 5883 MS2 24/60 Linfeng_091811_SIN3A_2.raw High QSLEASLAETEGR 1 0 CID 108.57 4.33 1.00 1 2 695.84229 1390.67729 -2.62 30.44 3601 3601 MS2 21/24 Linfeng_091611_rIgG_8.raw High QSLEASLAETEGR 1 0 CID 101.76 4.33 1.00 1 2 695.84198 1390.67668 -3.05 30.34 3301 3301 MS2 22/24 Linfeng_091611_rIgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 86.42 4.33 1.00 1 2 691.32361 1381.63994 -5.99 26.15 2841 2841 MS2 18/22 Linfeng_091811_SIN3A_1.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 91.55 4.33 1.00 1 2 695.84064 1390.67400 -4.99 30.81 3303 3303 MS2 21/24 Linfeng_091811_SIN3A_10.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 62.37 4.32 1.00 1 2 717.88770 1434.76811 -1.32 29.02 5722 5722 MS2 17/20 Linfeng_081211_IgG_4.raw High QSLEASLAETEGR 1 0 CID 105.85 4.32 1.00 1 2 695.84314 1390.67900 -1.39 30.42 3396 3396 MS2 22/24 Linfeng_091611_rIgG_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 37.20 4.30 1.00 1 4 726.85040 2904.37978 -1.02 41.13 9894 9894 MS2 32/156 Linfeng_081211_IgG_8.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 77.79 4.30 1.00 1 2 691.32568 1381.64409 -2.99 27.75 5520 5520 MS2 18/22 Linfeng_081211_IgG_3.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 87.08 4.30 1.00 1 2 691.32355 1381.63982 -6.08 26.45 2812 2812 MS2 18/22 Linfeng_091811_SIN3A_9.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 76.99 4.30 1.00 1 2 691.32385 1381.64043 -5.64 26.45 2919 2919 MS2 18/22 Linfeng_091811_SIN3A_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR IPI:IPI00009865.4 1 1 CID 56.11 4.30 1.00 1 3 1018.21619 3052.63401 2.15 54.04 9813 9813 MS2 23/104 Linfeng_081211_IgG_1.raw High ADLEMQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID 30.12 4.29 1.00 1 3 699.35382 2096.04691 0.02 54.32 12796 12796 MS2 21/68 Linfeng_081211_IgG_8.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 109.60 4.29 1.00 1 2 695.84119 1390.67510 -4.20 30.60 3589 3589 MS2 21/24 Linfeng_091811_SIN3A_5.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 63.03 4.29 1.00 1 2 717.88647 1434.76567 -3.02 28.54 2968 2968 MS2 16/20 Linfeng_091811_SIN3A_7.raw High IRLENEIQTYR 1 0 CID 58.90 4.29 1.00 1 2 717.88751 1434.76775 -1.57 28.17 3094 3094 MS2 16/20 Linfeng_091611_rIgG_7.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 64.12 4.29 1.00 1 2 998.98889 1996.97051 -0.26 40.14 8641 8641 MS2 21/32 Linfeng_081211_IgG_2.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 75.15 4.28 1.00 1 2 691.32587 1381.64446 -2.72 27.12 4951 4951 MS2 18/22 Linfeng_081211_IgG_5.raw High QSLEASLAETEGR 1 0 CID 77.10 4.28 1.00 1 2 695.84216 1390.67705 -2.79 30.28 2914 2914 MS2 21/24 Linfeng_091611_rIgG_3.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 79.26 4.28 1.00 1 2 691.32324 1381.63921 -6.52 26.32 2872 2872 MS2 18/22 Linfeng_091811_SIN3A_3.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 90.85 4.28 1.00 1 2 691.32434 1381.64141 -4.93 26.37 3011 3011 MS2 18/22 Linfeng_091811_SIN3A_5.raw High SLLEGEGSSGGGGR 1 0 CID 75.87 4.27 1.00 1 2 631.80084 1262.59441 -2.22 22.62 2263 2263 MS2 21/26 Linfeng_091611_rIgG_9.raw High ALEESNYELEGK 1 0 CID 90.17 4.27 1.00 1 2 691.32385 1381.64043 -5.64 26.16 2743 2743 MS2 18/22 Linfeng_091611_rIgG_9.raw High QSLEASLAETEGR 1 0 CID 107.34 4.27 1.00 1 2 695.84247 1390.67766 -2.35 30.35 3306 3306 MS2 21/24 Linfeng_091611_rIgG_9.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 71.67 4.27 1.00 1 2 775.34265 1549.67803 0.47 24.02 2959 2959 MS2 17/38 Linfeng_081211_IgG_1.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 34.04 4.27 1.00 1 3 412.22928 1234.67328 -4.68 24.95 2684 2684 MS2 22/36 Linfeng_091811_SIN3A_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 70.81 4.27 1.00 1 3 666.32727 1996.96726 -1.88 39.12 9106 9106 MS2 24/64 Linfeng_081211_IgG_10.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 88.92 4.26 1.00 1 2 695.84149 1390.67571 -3.76 30.80 3341 3341 MS2 20/24 Linfeng_091811_SIN3A_8.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 102.02 4.26 1.00 1 2 695.84320 1390.67912 -1.30 31.00 6400 6400 MS2 20/24 Linfeng_081211_IgG_7.raw High SLLEGEGSSGGGGR 1 0 CID 78.69 4.26 1.00 1 2 631.79956 1262.59184 -4.25 22.63 2429 2429 MS2 21/26 Linfeng_091611_rIgG_5.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 77.72 4.26 1.00 1 2 631.79938 1262.59148 -4.54 22.75 2253 2253 MS2 20/26 Linfeng_091811_SIN3A_8.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 28.23 4.26 1.00 1 3 666.32843 1996.97074 -0.14 40.20 8652 8652 MS2 25/64 Linfeng_081211_IgG_2.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 78.41 4.25 1.00 1 2 631.80017 1262.59307 -3.28 22.88 2412 2412 MS2 20/26 Linfeng_091811_SIN3A_6.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 97.53 4.25 1.00 1 2 691.32544 1381.64360 -3.34 27.15 4382 4382 MS2 18/22 Linfeng_081211_IgG_9.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 105.84 4.25 1.00 1 2 695.84314 1390.67900 -1.39 39.79 6144 6144 MS2 20/24 Linfeng_081211_IgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 79.88 4.25 1.00 1 2 691.32764 1381.64800 -0.16 30.92 4311 4311 MS2 18/22 Linfeng_081211_IgG_1.raw High KDAEAWFNEK 2 0 CID 48.94 4.25 1.00 1 2 619.29340 1237.57952 -4.30 27.62 2941 2941 MS2 16/18 Linfeng_091611_rIgG_9.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 76.04 4.25 1.00 1 2 631.80157 1262.59587 -1.06 30.56 4224 4224 MS2 20/26 Linfeng_081211_IgG_1.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 83.99 4.24 1.00 1 2 695.84161 1390.67595 -3.58 30.78 3398 3398 MS2 20/24 Linfeng_091811_SIN3A_9.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 85.37 4.24 1.00 1 2 691.32550 1381.64372 -3.25 26.96 5083 5083 MS2 18/22 Linfeng_081211_IgG_4.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 75.89 4.24 1.00 1 2 631.79938 1262.59148 -4.54 22.73 2327 2327 MS2 21/26 Linfeng_091811_SIN3A_2.raw High SLLEGEGSSGGGGR 1 0 CID 72.37 4.22 1.00 1 2 631.80035 1262.59343 -2.99 22.59 2253 2253 MS2 21/26 Linfeng_091611_rIgG_2.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 60.62 4.22 1.00 1 2 695.84344 1390.67961 -0.95 30.49 6442 6442 MS2 17/24 Linfeng_081211_IgG_8.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 80.06 4.22 1.00 1 2 631.80133 1262.59538 -1.45 23.70 4209 4209 MS2 19/26 Linfeng_081211_IgG_10.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 55.70 4.22 1.00 1 2 691.32758 1381.64787 -0.25 29.90 4088 4088 MS2 17/22 Linfeng_081211_IgG_1.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 60.48 4.21 1.00 1 2 683.32245 1365.63762 -1.28 24.73 4550 4550 MS2 17/20 Linfeng_081211_IgG_3.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 58.58 4.21 1.00 1 2 631.80048 1262.59368 -2.80 23.42 4157 4157 MS2 19/26 Linfeng_081211_IgG_6.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 51.34 4.20 1.00 1 2 683.32300 1365.63872 -0.48 24.11 3741 3741 MS2 17/20 Linfeng_081211_IgG_9.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 54.81 4.20 1.00 1 2 683.32208 1365.63689 -1.82 23.79 3979 3979 MS2 17/20 Linfeng_081211_IgG_5.raw High QSLEASLAETEGR 1 0 CID 108.81 4.20 1.00 1 2 695.84216 1390.67705 -2.79 30.38 3316 3316 MS2 21/24 Linfeng_091611_rIgG_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR IPI:IPI00009865.4 1 1 CID "M11(Oxidation), M26(Oxidation)" 47.28 4.19 1.00 1 2 1452.69458 2904.38188 -0.30 41.22 9895 9895 MS2 14/52 Linfeng_081211_IgG_7.raw High KDAEAWFNEK IPI:IPI00009865.4 2 1 CID 44.82 4.19 1.00 1 2 619.29297 1237.57866 -4.99 27.74 3058 3058 MS2 16/18 Linfeng_091811_SIN3A_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 78.47 4.19 1.00 1 2 691.32581 1381.64433 -2.81 28.16 4535 4535 MS2 18/22 Linfeng_081211_IgG_9.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 82.31 4.18 1.00 1 2 631.80023 1262.59319 -3.19 22.82 2381 2381 MS2 21/26 Linfeng_091811_SIN3A_3.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 74.11 4.16 1.00 1 2 631.80035 1262.59343 -2.99 22.59 2353 2353 MS2 20/26 Linfeng_091811_SIN3A_1.raw High QSLEASLAETEGR 1 0 CID 85.83 4.16 1.00 1 2 695.84216 1390.67705 -2.79 30.41 3097 3097 MS2 19/24 Linfeng_091611_rIgG_10.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 39.27 4.15 1.00 1 2 998.98944 1996.97161 0.29 41.78 10074 10074 MS2 8/32 Linfeng_081211_IgG_8.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 90.15 4.15 1.00 1 2 695.84308 1390.67888 -1.47 30.75 6225 6225 MS2 21/24 Linfeng_081211_IgG_5.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 67.77 4.15 1.00 1 2 717.88770 1434.76811 -1.32 28.95 5561 5561 MS2 16/20 Linfeng_081211_IgG_5.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 88.24 4.15 1.00 1 2 695.84351 1390.67974 -0.86 33.50 5529 5529 MS2 18/24 Linfeng_081211_IgG_9.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 70.61 4.15 1.00 1 2 631.80115 1262.59502 -1.74 27.39 3617 3617 MS2 21/26 Linfeng_081211_IgG_1.raw High ALEESNYELEGK 1 0 CID 93.47 4.14 1.00 1 2 691.32562 1381.64397 -3.08 26.10 2373 2373 MS2 18/22 Linfeng_091611_rIgG_3.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 71.14 4.13 1.00 1 2 717.88788 1434.76848 -1.06 29.53 5885 5885 MS2 17/20 Linfeng_081211_IgG_7.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 67.21 4.11 1.00 1 2 631.80090 1262.59453 -2.12 26.26 3434 3434 MS2 19/26 Linfeng_081211_IgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 88.48 4.10 1.00 1 2 691.32599 1381.64470 -2.55 27.09 5093 5093 MS2 18/22 Linfeng_081211_IgG_7.raw High NVQALEIELQSQLALK IPI:IPI00009865.4 1 1 CID 78.87 4.10 1.00 1 3 599.67554 1797.01206 0.19 50.35 9131 9131 MS2 23/60 Linfeng_081211_IgG_1.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 29.16 4.09 1.00 1 2 1056.52563 2112.04399 1.05 54.32 12947 12947 MS2 17/34 Linfeng_081211_IgG_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID M11(Oxidation) 36.38 4.09 1.00 1 3 963.47089 2888.39811 3.56 46.27 10729 10729 MS2 23/104 Linfeng_081211_IgG_4.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 20.37 4.09 1.00 1 3 412.23053 1234.67704 -1.64 26.97 5131 5131 MS2 20/36 Linfeng_081211_IgG_6.raw High SQYEQLAEQNR 1 0 CID 52.20 4.09 1.00 1 2 683.32336 1365.63945 0.06 23.38 2161 2161 MS2 17/20 Linfeng_091611_rIgG_10.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 72.44 4.09 1.00 1 2 631.80121 1262.59514 -1.64 23.35 4175 4175 MS2 21/26 Linfeng_081211_IgG_8.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 66.63 4.08 1.00 1 2 631.80212 1262.59697 -0.19 29.54 4012 4012 MS2 20/26 Linfeng_081211_IgG_1.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 76.38 4.05 1.00 1 2 695.84314 1390.67900 -1.39 31.52 6807 6807 MS2 17/24 Linfeng_081211_IgG_8.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 52.71 4.04 1.00 1 2 717.88837 1434.76946 -0.38 32.95 7372 7372 MS2 14/20 Linfeng_081211_IgG_3.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 80.66 4.03 1.00 1 2 691.32495 1381.64263 -4.05 34.04 4884 4884 MS2 17/22 Linfeng_081211_IgG_1.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 73.24 4.03 1.00 1 2 631.80060 1262.59392 -2.61 24.59 4504 4504 MS2 21/26 Linfeng_081211_IgG_3.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 75.69 4.01 1.00 1 2 695.84357 1390.67986 -0.77 31.68 6887 6887 MS2 17/24 Linfeng_081211_IgG_3.raw High SGGGGGGGGcGGGGGVSSLR IPI:IPI00009865.4 1 1 CID C10(Carbamidomethyl) 60.17 4.00 1.00 1 2 775.34424 1549.68120 2.51 22.51 2610 2610 MS2 16/38 Linfeng_081211_IgG_1.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 57.73 3.99 1.00 1 2 691.32690 1381.64653 -1.22 28.61 5764 5764 MS2 18/22 Linfeng_081211_IgG_8.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 64.88 3.98 1.00 1 2 631.80072 1262.59416 -2.41 23.82 3986 3986 MS2 21/26 Linfeng_081211_IgG_5.raw High KDAEAWFNEK IPI:IPI00009865.4 2 1 CID 56.97 3.98 1.00 1 2 619.29480 1237.58232 -2.03 28.10 5613 5613 MS2 16/18 Linfeng_081211_IgG_8.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 50.63 3.95 1.00 1 2 583.29639 1165.58550 0.59 30.68 4259 4259 MS2 15/16 Linfeng_081211_IgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR IPI:IPI00009865.4 1 1 CID 31.35 3.95 1.00 1 2 1436.70093 2872.39458 0.58 48.31 11389 11389 MS2 12/52 Linfeng_081211_IgG_5.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 68.93 3.94 1.00 1 2 695.84375 1390.68022 -0.51 30.82 6399 6399 MS2 16/24 Linfeng_081211_IgG_6.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 53.93 3.93 1.00 1 2 747.37061 1493.73393 -0.27 40.78 6450 6450 MS2 14/22 Linfeng_081211_IgG_1.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 85.87 3.93 1.00 1 2 1056.52698 2112.04668 2.32 54.43 9884 9884 MS2 17/34 Linfeng_081211_IgG_1.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 66.82 3.92 1.00 1 2 631.80139 1262.59551 -1.35 23.78 4083 4083 MS2 18/26 Linfeng_081211_IgG_4.raw High IRLENEIQTYR IPI:IPI00009865.4 1 1 CID 36.72 3.87 1.00 1 2 717.88739 1434.76750 -1.74 28.74 5693 5693 MS2 16/20 Linfeng_081211_IgG_10.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 47.90 3.87 1.00 1 2 631.80078 1262.59429 -2.32 23.98 3712 3712 MS2 15/26 Linfeng_081211_IgG_9.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 57.88 3.86 1.00 1 2 683.32416 1365.64104 1.22 23.65 4035 4035 MS2 13/20 Linfeng_081211_IgG_4.raw High KDAEAWFNEK IPI:IPI00009865.4 2 1 CID 56.51 3.86 1.00 1 2 619.29633 1237.58537 0.43 28.83 5639 5639 MS2 16/18 Linfeng_081211_IgG_7.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 43.44 3.85 1.00 1 2 583.29608 1165.58489 0.06 29.67 4035 4035 MS2 15/16 Linfeng_081211_IgG_1.raw High KDAEAWFNEK IPI:IPI00009865.4 2 1 CID 57.76 3.85 1.00 1 2 619.29633 1237.58537 0.43 28.77 5636 5636 MS2 16/18 Linfeng_081211_IgG_4.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 50.98 3.82 1.00 1 2 583.29486 1165.58245 -2.03 25.21 4653 4653 MS2 15/16 Linfeng_081211_IgG_6.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 29.56 3.82 1.00 1 2 747.36963 1493.73198 -1.58 21.35 3476 3476 MS2 12/22 Linfeng_081211_IgG_10.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 60.66 3.81 1.00 1 2 691.32806 1381.64885 0.46 32.96 4695 4695 MS2 15/22 Linfeng_081211_IgG_1.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 41.35 3.80 1.00 1 2 695.84326 1390.67925 -1.21 32.25 7101 7101 MS2 14/24 Linfeng_081211_IgG_3.raw High QSLEASLAETEGR IPI:IPI00009865.4 1 1 CID 42.85 3.74 1.00 1 2 695.84528 1390.68328 1.69 32.71 6532 6532 MS2 15/24 Linfeng_081211_IgG_2.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 59.62 3.74 1.00 1 2 631.80109 1262.59490 -1.83 23.95 4135 4135 MS2 20/26 Linfeng_081211_IgG_7.raw High GSLGGGFSSGGFSGGSFSR IPI:IPI00009865.4 1 1 CID 29.40 3.74 1.00 1 2 854.38794 1707.76860 -2.13 37.52 9020 9020 MS2 10/36 Linfeng_081211_IgG_3.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 57.47 3.73 1.00 1 2 583.29486 1165.58245 -2.03 25.41 4631 4631 MS2 14/16 Linfeng_081211_IgG_4.raw High QSVEADINGLR IPI:IPI00009865.4;IPI:IPI00171196.2 6 2 CID 63.67 3.72 1.00 1 2 601.31232 1201.61736 0.13 31.50 6182 6182 MS2 15/20 Linfeng_081211_IgG_2.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 36.64 3.72 1.00 1 2 747.37079 1493.73430 -0.03 22.23 3693 3693 MS2 15/22 Linfeng_081211_IgG_3.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 28.62 3.72 1.00 1 2 747.36951 1493.73174 -1.74 23.37 3775 3775 MS2 14/22 Linfeng_081211_IgG_2.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 72.49 3.72 1.00 1 2 691.32800 1381.64873 0.37 29.15 5465 5465 MS2 15/22 Linfeng_081211_IgG_2.raw High ALEESNYELEGK IPI:IPI00009865.4 1 1 CID 43.58 3.70 1.00 1 2 691.32800 1381.64873 0.37 30.58 5913 5913 MS2 13/22 Linfeng_081211_IgG_2.raw High SQYEQLAEQNR IPI:IPI00009865.4 1 1 CID 34.05 3.70 1.00 1 2 683.32263 1365.63799 -1.01 25.01 4283 4283 MS2 14/20 Linfeng_081211_IgG_2.raw High QSVEADINGLR IPI:IPI00009865.4;IPI:IPI00171196.2 6 2 CID 43.89 3.70 1.00 1 2 601.31116 1201.61504 -1.80 39.28 5987 5987 MS2 17/20 Linfeng_081211_IgG_1.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 60.63 3.70 1.00 1 2 617.84216 1234.67705 -1.63 25.97 4595 4595 MS2 17/18 Linfeng_081211_IgG_5.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 68.75 3.69 1.00 1 2 998.99109 1996.97490 1.94 35.50 7859 7859 MS2 17/32 Linfeng_081211_IgG_4.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 36.37 3.67 1.00 1 2 747.37054 1493.73381 -0.35 21.51 3267 3267 MS2 13/22 Linfeng_081211_IgG_5.raw High LKYENEVALR IPI:IPI00009865.4 1 1 CID 55.57 3.63 1.00 1 2 617.84094 1234.67461 -3.61 26.63 5059 5059 MS2 15/18 Linfeng_081211_IgG_6.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 48.76 3.60 1.00 1 2 583.29468 1165.58208 -2.34 26.24 5071 5071 MS2 15/16 Linfeng_081211_IgG_3.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 41.42 3.58 1.00 1 2 747.37103 1493.73479 0.30 21.06 3428 3428 MS2 15/22 Linfeng_081211_IgG_6.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 48.15 3.56 1.00 1 2 583.29553 1165.58379 -0.88 26.77 4309 4309 MS2 15/16 Linfeng_081211_IgG_9.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 31.97 3.55 1.00 1 2 747.36993 1493.73259 -1.17 21.03 3445 3445 MS2 15/22 Linfeng_081211_IgG_8.raw High DAEAWFNEK IPI:IPI00009865.4;IPI:IPI00328103.4 4 2 CID 36.71 3.54 1.00 1 2 555.24731 1109.48735 -2.27 33.99 7365 7365 MS2 13/16 Linfeng_081211_IgG_5.raw High AETEcQNTEYQQLLDIK IPI:IPI00009865.4 1 1 CID C5(Carbamidomethyl) 52.39 3.54 1.00 1 2 1041.98865 2082.97002 2.46 37.74 7954 7954 MS2 16/32 Linfeng_081211_IgG_2.raw High SQYEQLAEQNRK IPI:IPI00009865.4 1 1 CID 25.41 3.50 1.00 1 2 747.37164 1493.73601 1.12 21.57 3401 3401 MS2 13/22 Linfeng_081211_IgG_7.raw High VTmQNLNDR IPI:IPI00009865.4;IPI:IPI00217963.3;IPI:IPI00328103.4;IPI:IPI00384444.6 9 4 CID M3(Oxidation) 45.48 3.50 1.00 1 2 553.76672 1106.52617 0.21 18.27 1719 1719 MS2 15/16 Linfeng_081211_IgG_1.raw High ELTTEIDNNIEQISSYK IPI:IPI00009865.4 1 1 CID 38.16 3.50 1.00 1 2 998.98877 1996.97026 -0.38 46.10 8014 8014 MS2 14/32 Linfeng_081211_IgG_1.raw High LENEIQTYR IPI:IPI00009865.4 1 1 CID 54.01 3.49 1.00 1 2 583.29565 1165.58403 -0.67 25.32 4733 4733 MS2 15/16 Linfeng_081211_IgG_10.raw High SLLEGEGSSGGGGR IPI:IPI00009865.4 1 1 CID 33.96 3.47 1.00 1 2 631.80298 1262.59868 1.16 25.00 3906 3906 MS2 16/26 Linfeng_081211_IgG_9.raw High DAEAWFNEK IPI:IPI00009865.4;IPI:IPI00328103.4 4 2 CID 28.18 3.47 1.00 1 2 555.24786 1109.48845 -1.28 33.61 7539 7539 MS2 13/16 Linfeng_081211_IgG_8.raw High ADLEmQIESLTEELAYLK IPI:IPI00009865.4 1 1 CID M5(Oxidation) 29.75 3.46 1.00 1 2 1056.52539 2112.04350 0.82 54.31 12812 12812 MS2 16/34 Linfeng_081211_IgG_7.raw IPI:IPI00220327.4 644 66.0 8.12 "Keratin, type II cytoskeletal 1" 53.88 865 34 3267.58 53.42 340 29 2733.39 46.27 270 26 2485.95 48.45 255 25 A2 B2 C2 Sequence Protein Accessions # Proteins # Protein Groups Activation Type Modifications Probability XCorr ? Score Rank Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File Annotation High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 87.14 9.64 1.00 1 3 795.32025 2383.94620 -2.42 21.24 1966 1966 MS2 41/120 Linfeng_091811_SIN3A_7.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 151.09 9.40 1.00 1 3 1104.76782 3312.28891 -5.83 22.34 2298 2298 MS2 30/152 Linfeng_091611_rIgG_7.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 146.99 9.34 1.00 1 3 1104.76440 3312.27866 -8.93 22.61 2287 2287 MS2 31/152 Linfeng_091811_SIN3A_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 156.54 9.28 1.00 1 3 1104.76721 3312.28708 -6.38 22.49 2293 2293 MS2 32/152 Linfeng_091811_SIN3A_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 81.33 9.23 1.00 1 3 795.31909 2383.94272 -3.88 21.26 2302 2302 MS2 41/120 Linfeng_091811_SIN3A_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 156.54 9.13 1.00 1 3 1104.76587 3312.28305 -7.60 22.29 2221 2221 MS2 31/152 Linfeng_091611_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 193.56 9.12 1.00 1 3 1104.76807 3312.28965 -5.61 22.55 2480 2480 MS2 30/152 Linfeng_091811_SIN3A_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 152.56 8.88 1.00 1 3 1104.77234 3312.30246 -1.74 23.03 3726 3726 MS2 28/152 Linfeng_081211_IgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 173.80 8.86 1.00 1 3 1104.76660 3312.28525 -6.94 22.59 2380 2380 MS2 29/152 Linfeng_091811_SIN3A_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 203.02 8.86 1.00 1 3 1104.76990 3312.29514 -3.95 22.59 2170 2170 MS2 33/152 Linfeng_091811_SIN3A_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 79.82 8.77 1.00 1 3 795.32111 2383.94876 -1.35 21.00 2032 2032 MS2 42/120 Linfeng_091611_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 152.56 8.75 1.00 1 3 1104.76746 3312.28781 -6.16 22.35 2221 2221 MS2 30/152 Linfeng_091611_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 92.34 8.65 1.00 1 3 795.32190 2383.95114 -0.35 23.69 2901 2901 MS2 38/120 Linfeng_081211_IgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 167.02 8.63 1.00 1 3 1104.77197 3312.30136 -2.07 22.17 1844 1844 MS2 30/152 Linfeng_091611_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 178.28 8.60 1.00 1 3 1104.76746 3312.28781 -6.16 22.47 2136 2136 MS2 30/152 Linfeng_091811_SIN3A_7.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 300.00 8.56 1.00 1 3 1104.76953 3312.29404 -4.28 24.20 4374 4374 MS2 32/152 Linfeng_081211_IgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 205.10 8.53 1.00 1 3 1104.76819 3312.29001 -5.50 22.32 2221 2221 MS2 32/152 Linfeng_091611_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 145.57 8.47 1.00 1 3 1104.76941 3312.29367 -4.39 22.94 4015 4015 MS2 28/152 Linfeng_081211_IgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 113.27 8.45 1.00 1 3 1104.76709 3312.28672 -6.50 22.57 2229 2229 MS2 30/152 Linfeng_091811_SIN3A_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 102.95 8.43 1.00 1 3 1104.76660 3312.28525 -6.94 22.35 2493 2493 MS2 29/152 Linfeng_091611_rIgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 139.72 8.39 1.00 1 4 828.82825 3312.29116 -5.15 22.35 2299 2299 MS2 47/228 Linfeng_091611_rIgG_7.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 146.54 8.28 1.00 1 4 828.82788 3312.28969 -5.60 22.37 2323 2323 MS2 53/228 Linfeng_091811_SIN3A_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 300.00 8.27 1.00 1 3 1104.76697 3312.28635 -6.61 22.33 2317 2317 MS2 34/152 Linfeng_091811_SIN3A_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 78.99 8.18 1.00 1 3 795.32068 2383.94748 -1.88 21.28 2100 2100 MS2 35/120 Linfeng_091811_SIN3A_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 120.46 8.15 1.00 1 3 1104.76624 3312.28415 -7.27 22.24 2391 2391 MS2 30/152 Linfeng_091611_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 94.71 8.14 1.00 1 3 795.32147 2383.94986 -0.88 21.32 3539 3539 MS2 41/120 Linfeng_081211_IgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 76.02 8.12 1.00 1 3 795.31995 2383.94529 -2.80 21.23 2042 2042 MS2 40/120 Linfeng_091811_SIN3A_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 107.96 8.10 1.00 1 4 828.82635 3312.28359 -7.44 22.31 2224 2224 MS2 48/228 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 92.79 8.06 1.00 1 3 795.32184 2383.95096 -0.42 21.87 3391 3391 MS2 40/120 Linfeng_081211_IgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 78.60 7.98 1.00 1 3 795.32288 2383.95407 0.88 21.56 3364 3364 MS2 37/120 Linfeng_081211_IgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 76.11 7.98 1.00 1 3 795.32257 2383.95316 0.50 21.91 3501 3501 MS2 38/120 Linfeng_081211_IgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 93.66 7.82 1.00 1 3 795.32141 2383.94968 -0.96 20.92 2026 2026 MS2 37/120 Linfeng_091611_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 95.64 7.78 1.00 1 3 795.32050 2383.94693 -2.11 20.98 2042 2042 MS2 43/120 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTKWELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 143.21 7.74 1.00 1 3 978.17627 2932.51426 -0.74 40.70 4398 4398 MS2 29/92 Linfeng_091611_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 138.41 7.73 1.00 1 3 834.41998 2501.24540 -2.61 31.10 3400 3400 MS2 35/84 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 75.04 7.67 1.00 1 3 795.32013 2383.94583 -2.57 21.33 2202 2202 MS2 43/120 Linfeng_091811_SIN3A_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 93.36 7.55 1.00 1 3 795.32043 2383.94675 -2.19 21.18 2193 2193 MS2 40/120 Linfeng_091611_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 47.03 7.52 1.00 1 3 795.32300 2383.95444 1.04 20.98 1847 1847 MS2 31/120 Linfeng_091611_rIgG_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 89.07 7.49 1.00 1 3 795.31934 2383.94345 -3.57 20.95 2214 2214 MS2 41/120 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTKWELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 130.27 7.47 1.00 1 3 978.17462 2932.50931 -2.42 40.63 4652 4652 MS2 32/92 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 64.16 7.44 1.00 1 3 795.32300 2383.95444 1.04 22.46 3771 3771 MS2 32/120 Linfeng_081211_IgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 89.29 7.44 1.00 1 3 795.32043 2383.94675 -2.19 20.98 2127 2127 MS2 40/120 Linfeng_091811_SIN3A_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 69.91 7.33 1.00 1 3 795.32080 2383.94785 -1.73 20.97 2108 2108 MS2 43/120 Linfeng_091611_rIgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 56.70 7.32 1.00 1 3 795.32239 2383.95261 0.27 21.39 3528 3528 MS2 39/120 Linfeng_081211_IgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 82.77 7.29 1.00 1 3 795.32135 2383.94950 -1.04 21.19 2155 2155 MS2 41/120 Linfeng_091811_SIN3A_3.raw High SKAEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 126.64 7.19 1.00 1 3 834.42065 2501.24741 -1.80 31.06 3180 3180 MS2 35/84 Linfeng_091611_rIgG_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 89.56 7.18 1.00 1 3 795.32043 2383.94675 -2.19 21.18 2114 2114 MS2 41/120 Linfeng_091811_SIN3A_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 83.71 7.17 1.00 1 3 795.32080 2383.94785 -1.73 21.18 1971 1971 MS2 44/120 Linfeng_091811_SIN3A_10.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 91.80 7.16 1.00 1 3 665.32935 1993.97348 -1.62 44.81 5151 5151 MS2 29/60 Linfeng_091611_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 123.37 7.14 1.00 1 2 1192.47961 2383.95195 -0.01 23.80 2922 2922 MS2 22/60 Linfeng_081211_IgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 100.62 7.10 1.00 1 3 665.32843 1993.97074 -3.00 45.32 5141 5141 MS2 27/60 Linfeng_091811_SIN3A_7.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 76.33 7.05 1.00 1 3 665.32892 1993.97220 -2.26 44.63 5172 5172 MS2 29/60 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 129.62 7.03 1.00 1 2 1192.47815 2383.94902 -1.24 20.97 2028 2028 MS2 20/60 Linfeng_091611_rIgG_2.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 51.97 7.02 1.00 1 3 665.32965 1993.97440 -1.16 44.70 5147 5147 MS2 28/60 Linfeng_091611_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 98.18 7.01 1.00 1 3 795.32031 2383.94638 -2.34 20.99 2300 2300 MS2 40/120 Linfeng_091611_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 48.63 6.94 1.00 1 3 795.32147 2383.94986 -0.88 20.92 1685 1685 MS2 35/120 Linfeng_091611_rIgG_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 92.87 6.93 1.00 1 3 665.32916 1993.97293 -1.89 45.36 5209 5209 MS2 28/60 Linfeng_091811_SIN3A_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 85.17 6.91 1.00 1 3 795.32050 2383.94693 -2.11 21.33 2198 2198 MS2 40/120 Linfeng_091811_SIN3A_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 136.32 6.88 1.00 1 2 1192.47644 2383.94560 -2.67 21.35 2200 2200 MS2 22/60 Linfeng_091811_SIN3A_6.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 80.86 6.86 1.00 1 3 665.32947 1993.97385 -1.43 45.25 5351 5351 MS2 28/60 Linfeng_091811_SIN3A_6.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 80.57 6.84 1.00 1 3 665.32916 1993.97293 -1.89 45.09 5138 5138 MS2 28/60 Linfeng_091811_SIN3A_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 177.54 6.82 1.00 1 2 883.36798 1765.72869 -3.47 29.34 3419 3419 MS2 23/38 Linfeng_091811_SIN3A_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 66.91 6.79 1.00 1 3 1104.77332 3312.30539 -0.86 23.11 3882 3882 MS2 27/152 Linfeng_081211_IgG_7.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 169.07 6.78 1.00 1 2 883.36847 1765.72966 -2.92 28.96 3119 3119 MS2 26/38 Linfeng_091611_rIgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 56.63 6.77 1.00 1 3 665.32971 1993.97458 -1.07 44.70 5227 5227 MS2 27/60 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 98.20 6.76 1.00 1 3 728.71210 2184.12174 -1.77 41.96 4792 4792 MS2 29/72 Linfeng_091611_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 112.94 6.75 1.00 1 2 1192.47595 2383.94463 -3.08 21.43 2216 2216 MS2 22/60 Linfeng_091811_SIN3A_4.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 94.22 6.73 1.00 1 3 665.33014 1993.97586 -0.42 45.01 4939 4939 MS2 29/60 Linfeng_091611_rIgG_10.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 119.41 6.71 1.00 1 3 728.71216 2184.12192 -1.69 42.06 4814 4814 MS2 28/72 Linfeng_091611_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 108.96 6.57 1.00 1 2 1192.47693 2383.94658 -2.26 20.99 2043 2043 MS2 23/60 Linfeng_091611_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 143.53 6.57 1.00 1 2 883.36908 1765.73088 -2.23 29.03 3135 3135 MS2 23/38 Linfeng_091611_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 137.50 6.54 1.00 1 2 883.37030 1765.73332 -0.84 29.60 5976 5976 MS2 22/38 Linfeng_081211_IgG_6.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 149.55 6.52 1.00 1 2 883.36871 1765.73015 -2.64 29.01 2748 2748 MS2 21/38 Linfeng_091611_rIgG_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 71.19 6.47 1.00 1 3 665.32953 1993.97403 -1.34 44.87 5329 5329 MS2 29/60 Linfeng_091611_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 53.24 6.47 1.00 1 3 795.32220 2383.95206 0.04 25.07 3189 3189 MS2 23/120 Linfeng_081211_IgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 107.06 6.47 1.00 1 2 1192.47668 2383.94609 -2.47 21.17 1969 1969 MS2 21/60 Linfeng_091811_SIN3A_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 105.79 6.46 1.00 1 2 1192.47839 2383.94951 -1.03 21.31 3534 3534 MS2 21/60 Linfeng_081211_IgG_8.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 82.36 6.45 1.00 1 3 665.32910 1993.97275 -1.99 44.78 5379 5379 MS2 30/60 Linfeng_091611_rIgG_4.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 91.46 6.45 1.00 1 3 665.32904 1993.97257 -2.08 44.97 5283 5283 MS2 30/60 Linfeng_091811_SIN3A_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 103.76 6.45 1.00 1 2 1192.47937 2383.95146 -0.21 21.03 1700 1700 MS2 21/60 Linfeng_091611_rIgG_3.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 94.41 6.44 1.00 1 3 728.71112 2184.11881 -3.11 42.15 4926 4926 MS2 28/72 Linfeng_091811_SIN3A_2.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 137.24 6.44 1.00 1 2 883.36816 1765.72905 -3.26 28.92 3313 3313 MS2 24/38 Linfeng_091611_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 158.07 6.43 1.00 1 2 883.37042 1765.73357 -0.71 29.57 5913 5913 MS2 24/38 Linfeng_081211_IgG_4.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 99.13 6.42 1.00 1 3 762.71082 2286.11789 -3.07 33.00 3423 3423 MS2 35/76 Linfeng_091611_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 149.55 6.38 1.00 1 2 883.37128 1765.73528 0.26 31.46 6803 6803 MS2 23/38 Linfeng_081211_IgG_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 78.25 6.37 1.00 1 3 665.32922 1993.97312 -1.80 44.64 4735 4735 MS2 29/60 Linfeng_091611_rIgG_3.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 54.52 6.35 1.00 1 3 533.94781 1599.82889 -3.04 35.09 4005 4005 MS2 27/52 Linfeng_091811_SIN3A_2.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 68.69 6.34 1.00 1 3 665.32916 1993.97293 -1.89 45.11 5330 5330 MS2 28/60 Linfeng_091811_SIN3A_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 83.63 6.34 1.00 1 3 1104.77161 3312.30027 -2.40 39.27 5981 5981 MS2 26/152 Linfeng_081211_IgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 130.21 6.30 1.00 1 2 1192.47681 2383.94634 -2.36 21.17 1955 1955 MS2 21/60 Linfeng_091811_SIN3A_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 52.69 6.30 1.00 1 3 533.94806 1599.82962 -2.58 34.89 3972 3972 MS2 27/52 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 56.62 6.29 1.00 1 3 533.94806 1599.82962 -2.58 34.78 3869 3869 MS2 28/52 Linfeng_091611_rIgG_9.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 153.53 6.28 1.00 1 2 883.36829 1765.72930 -3.13 30.14 3386 3386 MS2 23/38 Linfeng_091811_SIN3A_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 133.98 6.28 1.00 1 2 883.36908 1765.73088 -2.23 29.36 3302 3302 MS2 24/38 Linfeng_091811_SIN3A_6.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 65.73 6.28 1.00 1 3 665.32739 1993.96762 -4.56 44.88 5345 5345 MS2 29/60 Linfeng_091611_rIgG_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 134.85 6.27 1.00 1 3 861.05560 2581.15226 -3.71 26.42 2944 2944 MS2 29/100 Linfeng_091611_rIgG_5.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 65.23 6.27 1.00 1 3 533.94720 1599.82706 -4.18 34.82 4001 4001 MS2 28/52 Linfeng_091811_SIN3A_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 97.35 6.26 1.00 1 3 665.32867 1993.97147 -2.63 45.11 5517 5517 MS2 29/60 Linfeng_091811_SIN3A_5.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 144.49 6.24 1.00 1 2 883.36914 1765.73100 -2.16 29.22 3271 3271 MS2 23/38 Linfeng_091811_SIN3A_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 154.61 6.24 1.00 1 2 883.37000 1765.73271 -1.19 30.45 6446 6446 MS2 25/38 Linfeng_081211_IgG_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 300.00 6.23 1.00 1 2 883.36865 1765.73003 -2.71 29.07 3240 3240 MS2 26/38 Linfeng_091811_SIN3A_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 125.81 6.23 1.00 1 2 1192.47632 2383.94536 -2.77 21.23 2160 2160 MS2 25/60 Linfeng_091811_SIN3A_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 133.31 6.21 1.00 1 2 1192.47583 2383.94438 -3.18 21.00 2220 2220 MS2 24/60 Linfeng_091611_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 105.94 6.21 1.00 1 2 1192.47595 2383.94463 -3.08 21.00 2130 2130 MS2 21/60 Linfeng_091811_SIN3A_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 75.03 6.21 1.00 1 3 665.32965 1993.97440 -1.16 44.78 5462 5462 MS2 28/60 Linfeng_091611_rIgG_8.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 120.23 6.18 1.00 1 3 728.71161 2184.12027 -2.44 42.35 4793 4793 MS2 29/72 Linfeng_091811_SIN3A_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 145.57 6.18 1.00 1 2 883.36859 1765.72991 -2.78 29.34 3076 3076 MS2 24/38 Linfeng_091811_SIN3A_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 134.28 6.17 1.00 1 2 1192.47705 2383.94682 -2.16 21.39 2116 2116 MS2 21/60 Linfeng_091811_SIN3A_9.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 128.31 6.16 1.00 1 3 762.71106 2286.11863 -2.75 33.11 3745 3745 MS2 32/76 Linfeng_091611_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 124.73 6.16 1.00 1 2 883.37231 1765.73735 1.44 30.61 6320 6320 MS2 19/38 Linfeng_081211_IgG_6.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 119.35 6.14 1.00 1 2 883.37103 1765.73479 -0.02 29.24 5989 5989 MS2 21/38 Linfeng_081211_IgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 147.78 6.13 1.00 1 3 861.05353 2581.14603 -6.12 26.40 2856 2856 MS2 29/100 Linfeng_091611_rIgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 145.74 6.13 1.00 1 2 1192.47705 2383.94682 -2.16 21.10 2126 2126 MS2 21/60 Linfeng_091611_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 130.46 6.12 1.00 1 2 883.37073 1765.73418 -0.36 31.64 6615 6615 MS2 23/38 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 48.96 6.12 1.00 1 3 533.94916 1599.83292 -0.52 35.13 7740 7740 MS2 28/52 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 123.23 6.11 1.00 1 3 728.71252 2184.12302 -1.19 41.99 4562 4562 MS2 28/72 Linfeng_091611_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 150.51 6.08 1.00 1 2 883.36682 1765.72637 -4.79 29.42 3113 3113 MS2 24/38 Linfeng_091811_SIN3A_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 136.76 6.07 1.00 1 2 883.37079 1765.73430 -0.29 30.58 6251 6251 MS2 22/38 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 58.48 6.05 1.00 1 3 533.94757 1599.82816 -3.50 35.20 3846 3846 MS2 27/52 Linfeng_091811_SIN3A_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 61.05 6.05 1.00 1 3 533.94806 1599.82962 -2.58 35.07 4044 4044 MS2 27/52 Linfeng_091811_SIN3A_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 182.23 6.05 1.00 1 2 883.37018 1765.73308 -0.98 29.31 3308 3308 MS2 21/38 Linfeng_091611_rIgG_6.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 86.22 6.04 1.00 1 3 762.70966 2286.11441 -4.59 33.01 3650 3650 MS2 34/76 Linfeng_091611_rIgG_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 132.95 6.04 1.00 1 3 1104.77344 3312.30576 -0.75 22.87 3943 3943 MS2 29/152 Linfeng_081211_IgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 130.91 6.03 1.00 1 3 861.05365 2581.14640 -5.98 26.36 2778 2778 MS2 29/100 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 32.90 6.03 1.00 1 3 533.94879 1599.83182 -1.21 35.31 8134 8134 MS2 26/52 Linfeng_081211_IgG_8.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 48.40 6.00 1.00 1 3 728.71210 2184.12174 -1.77 41.96 5105 5105 MS2 23/72 Linfeng_091611_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 137.70 5.99 1.00 1 2 1192.47644 2383.94560 -2.67 21.22 2199 2199 MS2 21/60 Linfeng_091611_rIgG_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 124.36 5.98 1.00 1 3 861.05280 2581.14383 -6.97 26.66 2934 2934 MS2 29/100 Linfeng_091811_SIN3A_6.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 52.39 5.97 1.00 1 3 533.94836 1599.83054 -2.01 35.14 4074 4074 MS2 27/52 Linfeng_091811_SIN3A_4.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 124.68 5.97 1.00 1 2 883.36914 1765.73100 -2.16 38.70 5845 5845 MS2 25/38 Linfeng_081211_IgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 83.06 5.96 1.00 1 3 795.32227 2383.95224 0.11 21.58 3548 3548 MS2 28/120 Linfeng_081211_IgG_10.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 98.00 5.96 1.00 1 3 665.32910 1993.97275 -1.99 44.98 5318 5318 MS2 28/60 Linfeng_091811_SIN3A_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 120.76 5.95 1.00 1 2 883.37158 1765.73589 0.61 31.96 6766 6766 MS2 24/38 Linfeng_081211_IgG_6.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 142.64 5.93 1.00 1 2 883.37054 1765.73381 -0.57 32.00 6964 6964 MS2 17/38 Linfeng_081211_IgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 140.62 5.92 1.00 1 3 861.05310 2581.14475 -6.61 26.26 2762 2762 MS2 30/100 Linfeng_091611_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 139.55 5.92 1.00 1 2 883.36914 1765.73100 -2.16 29.28 3309 3309 MS2 23/38 Linfeng_091811_SIN3A_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 124.68 5.92 1.00 1 2 1192.47937 2383.95146 -0.21 21.42 3536 3536 MS2 23/60 Linfeng_081211_IgG_6.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 135.57 5.91 1.00 1 2 883.36993 1765.73259 -1.26 29.06 3212 3212 MS2 24/38 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 87.88 5.89 1.00 1 3 728.71185 2184.12101 -2.11 42.25 4968 4968 MS2 24/72 Linfeng_091811_SIN3A_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 133.01 5.88 1.00 1 2 883.37036 1765.73345 -0.78 39.95 6196 6196 MS2 23/38 Linfeng_081211_IgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 122.98 5.88 1.00 1 2 883.36823 1765.72917 -3.20 31.92 3621 3621 MS2 22/38 Linfeng_091811_SIN3A_1.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 54.10 5.87 1.00 1 3 533.94788 1599.82907 -2.92 34.85 3488 3488 MS2 27/52 Linfeng_091611_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 84.47 5.86 1.00 1 2 1192.48022 2383.95317 0.50 21.05 1856 1856 MS2 20/60 Linfeng_091611_rIgG_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 121.80 5.86 1.00 1 2 1192.47693 2383.94658 -2.26 21.08 2313 2313 MS2 20/60 Linfeng_091611_rIgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 138.90 5.86 1.00 1 3 861.05420 2581.14804 -5.34 26.51 2898 2898 MS2 28/100 Linfeng_091811_SIN3A_3.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 109.81 5.82 1.00 1 3 861.05322 2581.14511 -6.47 26.30 2957 2957 MS2 28/100 Linfeng_091611_rIgG_4.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 110.87 5.81 1.00 1 3 728.70966 2184.11441 -5.13 42.26 5147 5147 MS2 26/72 Linfeng_091811_SIN3A_5.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 141.09 5.79 1.00 1 2 883.37201 1765.73674 1.09 32.02 6335 6335 MS2 20/38 Linfeng_081211_IgG_2.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 146.54 5.78 1.00 1 2 883.37018 1765.73308 -0.98 29.38 5905 5905 MS2 24/38 Linfeng_081211_IgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 143.75 5.78 1.00 1 3 861.05396 2581.14731 -5.62 26.50 2852 2852 MS2 28/100 Linfeng_091811_SIN3A_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 47.12 5.78 1.00 1 3 533.94879 1599.83182 -1.21 35.04 7725 7725 MS2 28/52 Linfeng_081211_IgG_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 89.80 5.76 1.00 1 3 861.05615 2581.15390 -3.07 27.37 3008 3008 MS2 28/100 Linfeng_091811_SIN3A_1.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 136.37 5.76 1.00 1 3 728.71198 2184.12137 -1.94 42.25 4992 4992 MS2 29/72 Linfeng_091811_SIN3A_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 57.76 5.75 1.00 1 3 533.94763 1599.82834 -3.38 34.81 4171 4171 MS2 27/52 Linfeng_091611_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 142.73 5.74 1.00 1 2 883.36896 1765.73064 -2.37 29.15 2933 2933 MS2 21/38 Linfeng_091611_rIgG_10.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 86.20 5.73 1.00 1 3 665.32898 1993.97239 -2.17 45.33 5259 5259 MS2 29/60 Linfeng_091811_SIN3A_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 99.23 5.73 1.00 1 2 1192.47632 2383.94536 -2.77 21.21 2117 2117 MS2 23/60 Linfeng_091811_SIN3A_2.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 79.93 5.72 1.00 1 3 762.71088 2286.11808 -2.99 33.44 3843 3843 MS2 33/76 Linfeng_091811_SIN3A_6.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 65.00 5.70 1.00 1 2 829.40015 1657.79302 0.05 38.54 5799 5799 MS2 22/32 Linfeng_081211_IgG_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 123.35 5.69 1.00 1 3 861.05408 2581.14768 -5.48 26.50 3030 3030 MS2 29/100 Linfeng_091811_SIN3A_5.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 44.01 5.67 1.00 1 3 572.95325 1716.84519 -3.49 31.23 3705 3705 MS2 32/56 Linfeng_091611_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 108.61 5.65 1.00 1 2 1192.47852 2383.94975 -0.93 21.04 2043 2043 MS2 23/60 Linfeng_091611_rIgG_9.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 71.27 5.64 1.00 1 3 553.26715 1657.78690 -3.64 30.69 3470 3470 MS2 36/64 Linfeng_091811_SIN3A_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 131.25 5.62 1.00 1 2 883.36859 1765.72991 -2.78 29.07 3296 3296 MS2 21/38 Linfeng_091611_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 81.83 5.62 1.00 1 2 1192.48071 2383.95415 0.91 22.49 3783 3783 MS2 21/60 Linfeng_081211_IgG_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 123.14 5.62 1.00 1 2 883.37054 1765.73381 -0.57 29.69 5944 5944 MS2 22/38 Linfeng_081211_IgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 91.90 5.62 1.00 1 2 1192.47986 2383.95244 0.20 22.78 3584 3584 MS2 22/60 Linfeng_081211_IgG_2.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 140.00 5.59 1.00 1 2 883.36792 1765.72856 -3.54 29.46 3217 3217 MS2 21/38 Linfeng_091811_SIN3A_9.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 98.33 5.58 1.00 1 3 728.71167 2184.12046 -2.36 41.95 4825 4825 MS2 23/72 Linfeng_091611_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 162.33 5.57 1.00 1 2 883.36884 1765.73039 -2.50 30.26 6361 6361 MS2 21/38 Linfeng_081211_IgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 79.49 5.56 1.00 1 4 828.82764 3312.28872 -5.89 22.52 2340 2340 MS2 50/228 Linfeng_091811_SIN3A_3.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 113.61 5.56 1.00 1 3 861.05298 2581.14438 -6.76 26.56 2701 2701 MS2 27/100 Linfeng_091811_SIN3A_7.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 101.65 5.56 1.00 1 3 728.71179 2184.12082 -2.19 41.94 4393 4393 MS2 26/72 Linfeng_091611_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 150.00 5.55 1.00 1 2 883.36853 1765.72978 -2.85 29.24 3227 3227 MS2 27/38 Linfeng_091811_SIN3A_2.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 134.59 5.54 1.00 1 3 783.74225 2349.21219 -2.69 53.63 6582 6582 MS2 34/80 Linfeng_091811_SIN3A_5.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 140.30 5.54 1.00 1 2 883.37048 1765.73369 -0.64 32.46 6790 6790 MS2 20/38 Linfeng_081211_IgG_5.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 70.24 5.53 1.00 1 3 615.65167 1844.94046 -3.08 27.29 2899 2899 MS2 29/60 Linfeng_091611_rIgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 70.76 5.53 1.00 1 3 665.33020 1993.97605 -0.33 45.04 5354 5354 MS2 26/60 Linfeng_091811_SIN3A_4.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 146.99 5.53 1.00 1 2 883.36957 1765.73186 -1.67 33.93 7734 7734 MS2 22/38 Linfeng_081211_IgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 52.90 5.51 1.00 1 4 828.83112 3312.30263 -1.69 22.54 3932 3932 MS2 43/228 Linfeng_081211_IgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 97.26 5.50 1.00 1 3 861.05377 2581.14676 -5.83 26.81 2753 2753 MS2 26/100 Linfeng_091811_SIN3A_10.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 79.68 5.50 1.00 1 3 615.65143 1844.93973 -3.48 27.42 2920 2920 MS2 31/60 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 56.70 5.49 1.00 1 3 533.94720 1599.82706 -4.18 35.08 4188 4188 MS2 27/52 Linfeng_091811_SIN3A_5.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 132.38 5.48 1.00 1 2 922.97455 1844.94182 -2.35 28.96 5762 5762 MS2 22/30 Linfeng_081211_IgG_6.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 64.95 5.46 1.00 1 3 855.72449 2565.15891 -3.12 27.28 3091 3091 MS2 27/100 Linfeng_091611_rIgG_4.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 126.78 5.46 1.00 1 3 783.74438 2349.21860 0.04 53.25 5800 5800 MS2 34/80 Linfeng_091611_rIgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 127.02 5.46 1.00 1 2 858.92645 1716.84563 -3.23 31.35 3558 3558 MS2 22/28 Linfeng_091811_SIN3A_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 49.95 5.45 1.00 1 3 665.33008 1993.97568 -0.52 45.71 5273 5273 MS2 24/60 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 59.79 5.44 1.00 1 3 533.94769 1599.82853 -3.27 34.85 3891 3891 MS2 27/52 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 46.70 5.44 1.00 1 3 533.94788 1599.82907 -2.92 35.34 3990 3990 MS2 27/52 Linfeng_091811_SIN3A_9.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 85.55 5.43 1.00 1 3 861.05646 2581.15482 -2.71 27.32 3096 3096 MS2 24/100 Linfeng_091611_rIgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 97.11 5.42 1.00 1 2 800.41858 1599.82988 -2.42 34.86 3879 3879 MS2 22/26 Linfeng_091611_rIgG_9.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 108.09 5.41 1.00 1 2 858.92719 1716.84709 -2.38 31.57 3615 3615 MS2 22/28 Linfeng_091811_SIN3A_4.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 78.79 5.40 1.00 1 3 615.65167 1844.94046 -3.08 27.49 3003 3003 MS2 28/60 Linfeng_091611_rIgG_7.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 25.16 5.40 1.00 1 3 615.65222 1844.94211 -2.19 28.44 5501 5501 MS2 24/60 Linfeng_081211_IgG_7.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 64.73 5.40 1.00 1 3 615.65094 1844.93827 -4.27 27.53 3029 3029 MS2 32/60 Linfeng_091811_SIN3A_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 71.46 5.37 1.00 1 3 572.95258 1716.84317 -4.66 31.14 3611 3611 MS2 29/56 Linfeng_091611_rIgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 98.97 5.37 1.00 1 3 861.05634 2581.15445 -2.85 26.93 4897 4897 MS2 30/100 Linfeng_081211_IgG_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 124.15 5.37 1.00 1 3 861.05328 2581.14530 -6.40 26.35 2869 2869 MS2 31/100 Linfeng_091811_SIN3A_1.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 57.59 5.36 1.00 1 3 762.71326 2286.12522 0.13 33.38 7185 7185 MS2 26/76 Linfeng_081211_IgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 79.34 5.35 1.00 1 2 1192.47815 2383.94902 -1.24 25.07 3188 3188 MS2 18/60 Linfeng_081211_IgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 122.11 5.34 1.00 1 2 883.37006 1765.73284 -1.12 30.65 6184 6184 MS2 17/38 Linfeng_081211_IgG_5.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 55.51 5.34 1.00 1 3 572.95581 1716.85288 0.99 32.73 6541 6541 MS2 27/56 Linfeng_081211_IgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 96.19 5.34 1.00 1 2 800.41864 1599.83000 -2.34 35.17 4015 4015 MS2 22/26 Linfeng_091811_SIN3A_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 53.96 5.32 1.00 1 3 572.95306 1716.84464 -3.81 31.45 3525 3525 MS2 34/56 Linfeng_091811_SIN3A_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 77.00 5.32 1.00 1 2 679.34875 1357.69023 -4.14 33.72 3735 3735 MS2 20/22 Linfeng_091611_rIgG_9.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 100.43 5.31 1.00 1 2 997.49170 1993.97612 -0.30 44.97 5260 5260 MS2 18/30 Linfeng_091611_rIgG_7.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 53.94 5.30 1.00 1 3 572.95337 1716.84555 -3.28 31.23 3420 3420 MS2 31/56 Linfeng_091611_rIgG_9.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 69.89 5.29 1.00 1 3 553.26740 1657.78763 -3.20 30.64 3452 3452 MS2 36/64 Linfeng_091811_SIN3A_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR IPI:IPI00220327.4 1 1 CID 75.03 5.29 1.00 1 3 1104.77454 3312.30906 0.25 22.79 3776 3776 MS2 27/152 Linfeng_081211_IgG_4.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 107.56 5.27 1.00 1 2 883.37134 1765.73540 0.33 32.89 7351 7351 MS2 20/38 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 300.00 5.27 1.00 1 3 783.74463 2349.21933 0.35 53.55 6334 6334 MS2 34/80 Linfeng_091811_SIN3A_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 69.41 5.27 1.00 1 2 679.34918 1357.69109 -3.51 33.83 3871 3871 MS2 20/22 Linfeng_091811_SIN3A_1.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 68.35 5.27 1.00 1 3 615.65210 1844.94175 -2.39 28.92 5752 5752 MS2 31/60 Linfeng_081211_IgG_6.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 72.49 5.24 1.00 1 2 829.39917 1657.79106 -1.13 31.13 6510 6510 MS2 22/32 Linfeng_081211_IgG_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 111.08 5.24 1.00 1 2 858.92719 1716.84709 -2.38 31.31 3514 3514 MS2 22/28 Linfeng_091611_rIgG_7.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 84.90 5.24 1.00 1 2 829.40039 1657.79350 0.34 32.39 6443 6443 MS2 22/32 Linfeng_081211_IgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 74.35 5.24 1.00 1 2 679.35132 1357.69536 -0.36 41.83 6738 6738 MS2 19/22 Linfeng_081211_IgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 50.83 5.24 1.00 1 3 665.33044 1993.97678 0.03 45.48 10684 10684 MS2 25/60 Linfeng_081211_IgG_5.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 98.60 5.24 1.00 1 2 800.41809 1599.82891 -3.03 34.91 3899 3899 MS2 22/26 Linfeng_091611_rIgG_2.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 100.38 5.24 1.00 1 2 922.97467 1844.94206 -2.22 28.22 5299 5299 MS2 23/30 Linfeng_081211_IgG_5.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 109.36 5.23 1.00 1 3 783.74481 2349.21988 0.59 53.39 5963 5963 MS2 30/80 Linfeng_091611_rIgG_10.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 69.98 5.23 1.00 1 2 829.39813 1657.78899 -2.38 30.57 3342 3342 MS2 22/32 Linfeng_091611_rIgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 72.17 5.23 1.00 1 2 679.34790 1357.68852 -5.40 33.63 3729 3729 MS2 20/22 Linfeng_091611_rIgG_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 59.78 5.23 1.00 1 3 553.26788 1657.78910 -2.32 30.51 3323 3323 MS2 34/64 Linfeng_091611_rIgG_1.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 135.38 5.23 1.00 1 3 783.74512 2349.22080 0.98 53.73 6338 6338 MS2 33/80 Linfeng_091811_SIN3A_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 122.28 5.22 1.00 1 2 858.92584 1716.84441 -3.95 31.44 3705 3705 MS2 22/28 Linfeng_091811_SIN3A_5.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 125.59 5.22 1.00 1 2 858.92596 1716.84465 -3.80 31.15 3612 3612 MS2 22/28 Linfeng_091611_rIgG_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 52.65 5.22 1.00 1 2 679.35034 1357.69341 -1.80 33.84 7370 7370 MS2 19/22 Linfeng_081211_IgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 100.09 5.22 1.00 1 3 861.05530 2581.15134 -4.06 26.56 2935 2935 MS2 28/100 Linfeng_091611_rIgG_6.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 116.73 5.21 1.00 1 2 997.48950 1993.97173 -2.50 44.89 4767 4767 MS2 20/30 Linfeng_091611_rIgG_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 107.16 5.21 1.00 1 2 997.48877 1993.97026 -3.23 45.05 5413 5413 MS2 19/30 Linfeng_091611_rIgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 113.64 5.21 1.00 1 3 861.05377 2581.14676 -5.83 26.52 2929 2929 MS2 28/100 Linfeng_091811_SIN3A_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 81.77 5.21 1.00 1 2 679.34869 1357.69011 -4.23 34.06 3935 3935 MS2 20/22 Linfeng_091811_SIN3A_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 78.11 5.21 1.00 1 2 679.34924 1357.69121 -3.42 33.83 4043 4043 MS2 20/22 Linfeng_091611_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 133.19 5.20 1.00 1 2 883.37048 1765.73369 -0.64 37.69 5587 5587 MS2 20/38 Linfeng_081211_IgG_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 31.83 5.20 1.00 1 3 553.26703 1657.78653 -3.87 30.81 3440 3440 MS2 33/64 Linfeng_091811_SIN3A_2.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 79.50 5.19 1.00 1 2 829.39764 1657.78801 -2.97 30.80 3275 3275 MS2 20/32 Linfeng_091811_SIN3A_7.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 64.84 5.19 1.00 1 2 679.34814 1357.68901 -5.04 33.95 4040 4040 MS2 20/22 Linfeng_091811_SIN3A_5.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 109.43 5.19 1.00 1 3 783.74536 2349.22153 1.29 53.37 6170 6170 MS2 32/80 Linfeng_091611_rIgG_9.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 84.54 5.18 1.00 1 2 829.39862 1657.78996 -1.80 30.55 3332 3332 MS2 22/32 Linfeng_091611_rIgG_9.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 56.07 5.17 1.00 1 3 572.95319 1716.84500 -3.60 31.55 3612 3612 MS2 31/56 Linfeng_091811_SIN3A_4.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 111.60 5.17 1.00 1 2 997.49036 1993.97344 -1.64 45.07 5194 5194 MS2 21/30 Linfeng_091611_rIgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 77.50 5.17 1.00 1 2 679.34790 1357.68852 -5.40 33.96 3922 3922 MS2 20/22 Linfeng_091611_rIgG_6.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 89.27 5.17 1.00 1 2 829.39941 1657.79155 -0.84 30.56 3116 3116 MS2 22/32 Linfeng_091611_rIgG_10.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 89.24 5.16 1.00 1 2 829.39673 1657.78618 -4.08 30.85 3520 3520 MS2 21/32 Linfeng_091811_SIN3A_4.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 118.55 5.16 1.00 1 2 997.48938 1993.97148 -2.62 45.25 5319 5319 MS2 20/30 Linfeng_091811_SIN3A_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 43.91 5.16 1.00 1 3 533.94940 1599.83365 -0.06 34.96 7756 7756 MS2 27/52 Linfeng_081211_IgG_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 120.33 5.16 1.00 1 2 858.92853 1716.84978 -0.82 31.59 6468 6468 MS2 21/28 Linfeng_081211_IgG_5.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 76.21 5.16 1.00 1 2 679.34869 1357.69011 -4.23 33.64 3938 3938 MS2 20/22 Linfeng_091611_rIgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 119.62 5.15 1.00 1 3 861.05768 2581.15848 -1.29 39.92 6185 6185 MS2 24/100 Linfeng_081211_IgG_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 89.07 5.15 1.00 1 2 829.39777 1657.78826 -2.83 30.59 3445 3445 MS2 21/32 Linfeng_091811_SIN3A_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 120.21 5.15 1.00 1 2 858.92920 1716.85112 -0.03 31.31 6535 6535 MS2 21/28 Linfeng_081211_IgG_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 118.73 5.14 1.00 1 2 858.92657 1716.84587 -3.09 31.64 3609 3609 MS2 22/28 Linfeng_091811_SIN3A_6.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 71.82 5.14 1.00 1 2 679.35034 1357.69341 -1.80 34.98 8141 8141 MS2 19/22 Linfeng_081211_IgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 122.54 5.14 1.00 1 2 858.92670 1716.84612 -2.95 31.17 3409 3409 MS2 22/28 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 63.88 5.14 1.00 1 2 738.39508 1475.78288 -1.65 38.00 5645 5645 MS2 19/22 Linfeng_081211_IgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 103.69 5.14 1.00 1 2 883.37024 1765.73320 -0.91 32.99 7128 7128 MS2 21/38 Linfeng_081211_IgG_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 60.26 5.13 1.00 1 3 572.95471 1716.84958 -0.93 31.65 6491 6491 MS2 29/56 Linfeng_081211_IgG_5.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 112.37 5.13 1.00 1 2 858.92639 1716.84551 -3.31 31.52 3370 3370 MS2 23/28 Linfeng_091811_SIN3A_7.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 72.03 5.13 1.00 1 2 679.35028 1357.69328 -1.89 33.77 7598 7598 MS2 20/22 Linfeng_081211_IgG_8.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 93.39 5.13 1.00 1 2 829.39886 1657.79045 -1.50 30.53 3412 3412 MS2 20/32 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 55.28 5.13 1.00 1 3 533.94739 1599.82761 -3.84 35.16 3871 3871 MS2 28/52 Linfeng_091811_SIN3A_10.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 87.95 5.12 1.00 1 2 829.39758 1657.78789 -3.05 30.82 6371 6371 MS2 21/32 Linfeng_081211_IgG_10.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 24.42 5.12 1.00 1 3 453.23529 1357.69132 -3.34 33.93 3773 3773 MS2 27/44 Linfeng_091611_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 84.90 5.12 1.00 1 2 1192.47766 2383.94805 -1.65 21.53 3355 3355 MS2 22/60 Linfeng_081211_IgG_4.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 92.09 5.12 1.00 1 2 829.39728 1657.78728 -3.42 30.92 3318 3318 MS2 22/32 Linfeng_091811_SIN3A_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 130.91 5.12 1.00 1 2 858.92706 1716.84685 -2.52 31.26 3709 3709 MS2 22/28 Linfeng_091611_rIgG_8.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 84.64 5.12 1.00 1 2 829.39740 1657.78752 -3.27 30.77 3434 3434 MS2 21/32 Linfeng_091811_SIN3A_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 122.54 5.12 1.00 1 2 858.92700 1716.84673 -2.59 31.24 3429 3429 MS2 22/28 Linfeng_091611_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 58.94 5.12 1.00 1 3 855.72461 2565.15927 -2.97 27.37 2914 2914 MS2 28/100 Linfeng_091611_rIgG_2.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 63.46 5.12 1.00 1 2 829.39709 1657.78691 -3.64 30.44 3519 3519 MS2 22/32 Linfeng_091611_rIgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 76.36 5.11 1.00 1 2 800.41821 1599.82915 -2.88 34.86 3890 3890 MS2 21/26 Linfeng_091611_rIgG_1.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 75.92 5.11 1.00 1 2 679.34888 1357.69048 -3.96 33.78 3354 3354 MS2 20/22 Linfeng_091611_rIgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 71.06 5.11 1.00 1 2 858.92773 1716.84819 -1.74 38.40 5755 5755 MS2 19/28 Linfeng_081211_IgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 117.70 5.11 1.00 1 2 858.92584 1716.84441 -3.95 31.60 3409 3409 MS2 23/28 Linfeng_091811_SIN3A_10.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 86.98 5.11 1.00 1 2 679.34833 1357.68938 -4.77 33.99 3862 3862 MS2 20/22 Linfeng_091811_SIN3A_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 73.84 5.11 1.00 1 2 679.34937 1357.69145 -3.24 33.89 3890 3890 MS2 20/22 Linfeng_091811_SIN3A_3.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 55.45 5.10 1.00 1 2 679.35089 1357.69451 -0.99 40.82 6464 6464 MS2 18/22 Linfeng_081211_IgG_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 58.72 5.10 1.00 1 2 829.39392 1657.78057 -7.47 30.78 3615 3615 MS2 22/32 Linfeng_091811_SIN3A_5.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 71.28 5.10 1.00 1 2 679.34943 1357.69158 -3.15 34.07 3702 3702 MS2 20/22 Linfeng_091811_SIN3A_7.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 94.98 5.10 1.00 1 2 829.39783 1657.78838 -2.75 30.64 3464 3464 MS2 22/32 Linfeng_091811_SIN3A_3.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 79.26 5.10 1.00 1 2 922.97516 1844.94304 -1.69 28.11 5418 5418 MS2 18/30 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 59.15 5.10 1.00 1 3 533.94763 1599.82834 -3.38 35.07 4066 4066 MS2 25/52 Linfeng_091611_rIgG_6.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 76.85 5.10 1.00 1 2 679.34821 1357.68913 -4.95 33.78 3753 3753 MS2 20/22 Linfeng_091611_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 86.67 5.10 1.00 1 2 1192.47937 2383.95146 -0.21 21.92 3504 3504 MS2 20/60 Linfeng_081211_IgG_7.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 61.68 5.10 1.00 1 3 572.95343 1716.84574 -3.17 31.24 3505 3505 MS2 31/56 Linfeng_091611_rIgG_7.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 300.00 5.09 1.00 1 3 783.74475 2349.21970 0.51 53.32 6530 6530 MS2 30/80 Linfeng_091611_rIgG_8.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 107.16 5.09 1.00 1 2 800.42035 1599.83342 -0.21 35.15 7749 7749 MS2 20/26 Linfeng_081211_IgG_4.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 10.83 5.08 1.00 1 3 762.71033 2286.11643 -3.71 33.17 3667 3667 MS2 22/76 Linfeng_091611_rIgG_9.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 58.99 5.07 1.00 1 3 572.95282 1716.84391 -4.24 31.51 3368 3368 MS2 32/56 Linfeng_091811_SIN3A_7.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 74.30 5.07 1.00 1 2 679.34857 1357.68987 -4.41 34.20 3784 3784 MS2 20/22 Linfeng_091811_SIN3A_8.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 67.86 5.06 1.00 1 2 679.35193 1357.69658 0.54 34.20 7545 7545 MS2 20/22 Linfeng_081211_IgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 38.15 5.06 1.00 1 2 738.39508 1475.78288 -1.65 29.10 5752 5752 MS2 18/22 Linfeng_081211_IgG_4.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 62.79 5.06 1.00 1 2 829.39813 1657.78899 -2.38 30.77 6544 6544 MS2 20/32 Linfeng_081211_IgG_8.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 72.77 5.06 1.00 1 2 883.37183 1765.73638 0.88 31.02 6032 6032 MS2 19/38 Linfeng_081211_IgG_2.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 87.02 5.06 1.00 1 2 829.39929 1657.79131 -0.99 30.98 6400 6400 MS2 22/32 Linfeng_081211_IgG_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 74.95 5.06 1.00 1 2 679.34863 1357.68999 -4.32 34.08 3733 3733 MS2 20/22 Linfeng_091811_SIN3A_10.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 104.81 5.05 1.00 1 2 883.37012 1765.73296 -1.05 31.26 6519 6519 MS2 18/38 Linfeng_081211_IgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 112.02 5.05 1.00 1 3 861.05597 2581.15335 -3.28 26.83 5064 5064 MS2 29/100 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 111.45 5.05 1.00 1 2 800.41809 1599.82891 -3.03 34.91 4101 4101 MS2 21/26 Linfeng_091611_rIgG_4.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 102.90 5.05 1.00 1 2 997.48877 1993.97026 -3.23 44.84 5198 5198 MS2 21/30 Linfeng_091611_rIgG_1.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 42.39 5.04 1.00 1 3 615.65271 1844.94358 -1.40 27.88 5419 5419 MS2 22/60 Linfeng_081211_IgG_10.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 99.69 5.04 1.00 1 2 800.41895 1599.83061 -1.96 35.65 8053 8053 MS2 22/26 Linfeng_081211_IgG_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 86.94 5.03 1.00 1 2 670.83765 1340.66802 -0.94 19.22 1859 1859 MS2 19/22 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 47.98 5.03 1.00 1 3 533.94977 1599.83475 0.62 37.85 9144 9144 MS2 25/52 Linfeng_081211_IgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 49.92 5.02 1.00 1 3 572.95239 1716.84262 -4.98 31.57 3406 3406 MS2 32/56 Linfeng_091811_SIN3A_10.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 91.18 5.02 1.00 1 2 829.39825 1657.78923 -2.24 30.45 3315 3315 MS2 21/32 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 37.52 5.02 1.00 1 2 738.39545 1475.78362 -1.15 35.98 5238 5238 MS2 19/22 Linfeng_081211_IgG_1.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 48.02 5.02 1.00 1 3 615.65283 1844.94394 -1.20 29.71 6163 6163 MS2 25/60 Linfeng_081211_IgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 116.85 5.01 1.00 1 2 858.92700 1716.84673 -2.59 31.26 3423 3423 MS2 22/28 Linfeng_091611_rIgG_9.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 85.15 5.01 1.00 1 4 546.78510 2184.11855 -3.23 42.17 4928 4928 MS2 42/108 Linfeng_091811_SIN3A_2.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 76.75 5.01 1.00 1 2 670.83929 1340.67131 1.51 20.45 3003 3003 MS2 19/22 Linfeng_081211_IgG_4.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 66.59 5.01 1.00 1 3 553.26703 1657.78653 -3.87 30.52 3529 3529 MS2 34/64 Linfeng_091611_rIgG_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 68.16 5.00 1.00 1 2 679.34882 1357.69036 -4.05 34.22 3844 3844 MS2 20/22 Linfeng_091811_SIN3A_9.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 72.77 5.00 1.00 1 2 679.34912 1357.69097 -3.60 33.88 3843 3843 MS2 20/22 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 104.34 5.00 1.00 1 3 728.71252 2184.12302 -1.19 41.94 4879 4879 MS2 27/72 Linfeng_091611_rIgG_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 53.99 5.00 1.00 1 3 533.94861 1599.83127 -1.55 35.57 8029 8029 MS2 24/52 Linfeng_081211_IgG_7.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 78.25 5.00 1.00 1 2 679.34888 1357.69048 -3.96 34.11 3929 3929 MS2 20/22 Linfeng_091811_SIN3A_6.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 77.00 4.99 1.00 1 2 679.34857 1357.68987 -4.41 33.83 3922 3922 MS2 20/22 Linfeng_091611_rIgG_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 46.25 4.99 1.00 1 3 861.05609 2581.15372 -3.14 29.13 3247 3247 MS2 23/100 Linfeng_091811_SIN3A_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 142.56 4.99 1.00 1 2 883.36810 1765.72893 -3.33 29.63 5803 5803 MS2 22/38 Linfeng_081211_IgG_5.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 65.60 4.99 1.00 1 2 829.39941 1657.79155 -0.84 31.18 6460 6460 MS2 21/32 Linfeng_081211_IgG_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 86.01 4.97 1.00 1 2 670.83722 1340.66716 -1.58 19.55 1950 1950 MS2 19/22 Linfeng_091811_SIN3A_4.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 46.82 4.97 1.00 1 3 615.65240 1844.94266 -1.89 28.15 5273 5273 MS2 28/60 Linfeng_081211_IgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 71.35 4.97 1.00 1 3 855.72455 2565.15909 -3.05 27.56 2997 2997 MS2 29/100 Linfeng_091811_SIN3A_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 117.35 4.97 1.00 1 2 858.92737 1716.84746 -2.17 31.25 6711 6711 MS2 21/28 Linfeng_081211_IgG_8.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 75.87 4.96 1.00 1 2 670.83624 1340.66521 -3.04 19.19 1839 1839 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 60.22 4.96 1.00 1 2 738.39459 1475.78191 -2.31 28.57 5645 5645 MS2 19/22 Linfeng_081211_IgG_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 129.37 4.96 1.00 1 2 858.92834 1716.84941 -1.03 39.40 6023 6023 MS2 21/28 Linfeng_081211_IgG_1.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 94.94 4.96 1.00 1 2 800.41785 1599.82842 -3.33 34.94 4017 4017 MS2 22/26 Linfeng_091811_SIN3A_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 67.29 4.95 1.00 1 2 829.39923 1657.79119 -1.06 31.91 6969 6969 MS2 21/32 Linfeng_081211_IgG_3.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 114.36 4.95 1.00 1 2 997.49078 1993.97429 -1.21 45.22 5348 5348 MS2 20/30 Linfeng_091811_SIN3A_3.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 74.22 4.95 1.00 1 3 861.05579 2581.15281 -3.49 27.54 2936 2936 MS2 26/100 Linfeng_091611_rIgG_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 49.11 4.95 1.00 1 3 572.95331 1716.84537 -3.38 31.40 3587 3587 MS2 31/56 Linfeng_091611_rIgG_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 50.78 4.95 1.00 1 3 572.95313 1716.84482 -3.70 31.60 3604 3604 MS2 31/56 Linfeng_091811_SIN3A_6.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 59.51 4.95 1.00 1 2 829.39825 1657.78923 -2.24 31.06 6315 6315 MS2 22/32 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.00 4.94 1.00 1 2 738.39252 1475.77776 -5.13 28.21 3086 3086 MS2 19/22 Linfeng_091811_SIN3A_2.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 80.88 4.94 1.00 1 3 615.65167 1844.94046 -3.08 27.63 3055 3055 MS2 31/60 Linfeng_091811_SIN3A_3.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 68.02 4.94 1.00 1 2 829.39728 1657.78728 -3.42 30.82 3404 3404 MS2 21/32 Linfeng_091811_SIN3A_9.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 125.19 4.93 1.00 1 2 997.48883 1993.97038 -3.17 45.41 5554 5554 MS2 18/30 Linfeng_091811_SIN3A_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.01 4.93 1.00 1 2 738.39386 1475.78044 -3.31 28.25 3269 3269 MS2 19/22 Linfeng_091811_SIN3A_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 31.57 4.92 1.00 1 3 861.05737 2581.15757 -1.65 27.35 5015 5015 MS2 30/100 Linfeng_081211_IgG_5.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 87.97 4.92 1.00 1 2 670.83691 1340.66655 -2.04 19.09 1778 1778 MS2 19/22 Linfeng_091611_rIgG_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 47.23 4.91 1.00 1 3 553.26721 1657.78708 -3.53 30.64 3351 3351 MS2 32/64 Linfeng_091611_rIgG_2.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 49.38 4.91 1.00 1 3 553.26776 1657.78873 -2.54 30.57 3334 3334 MS2 32/64 Linfeng_091611_rIgG_9.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 94.01 4.91 1.00 1 2 800.41754 1599.82781 -3.72 35.22 4085 4085 MS2 21/26 Linfeng_091811_SIN3A_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 61.41 4.91 1.00 1 2 679.35120 1357.69512 -0.54 34.12 7521 7521 MS2 20/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 60.89 4.91 1.00 1 2 738.39429 1475.78130 -2.73 28.02 3096 3096 MS2 19/22 Linfeng_091811_SIN3A_1.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 64.54 4.91 1.00 1 2 829.39886 1657.79045 -1.50 31.19 6476 6476 MS2 20/32 Linfeng_081211_IgG_4.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 75.73 4.91 1.00 1 2 829.39801 1657.78874 -2.53 30.88 3507 3507 MS2 22/32 Linfeng_091811_SIN3A_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 70.96 4.90 1.00 1 2 670.83716 1340.66704 -1.67 19.42 1948 1948 MS2 19/22 Linfeng_091611_rIgG_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 113.92 4.90 1.00 1 2 858.92627 1716.84526 -3.45 31.73 3463 3463 MS2 22/28 Linfeng_091811_SIN3A_8.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 114.03 4.90 1.00 1 2 883.37018 1765.73308 -0.98 29.10 3138 3138 MS2 23/38 Linfeng_091611_rIgG_9.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 58.43 4.90 1.00 1 3 615.65277 1844.94376 -1.30 28.05 5393 5393 MS2 28/60 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 57.95 4.89 1.00 1 2 738.39478 1475.78227 -2.06 28.11 3169 3169 MS2 19/22 Linfeng_091611_rIgG_5.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 40.11 4.89 1.00 1 3 762.71021 2286.11606 -3.87 33.39 3782 3782 MS2 23/76 Linfeng_091811_SIN3A_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 83.90 4.88 1.00 1 2 679.35022 1357.69316 -1.98 34.07 7398 7398 MS2 20/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.55 4.88 1.00 1 2 738.39478 1475.78227 -2.06 28.15 3124 3124 MS2 19/22 Linfeng_091811_SIN3A_3.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 91.32 4.88 1.00 1 2 738.37793 1475.74858 -0.24 37.21 8443 8443 MS2 20/22 Linfeng_081211_IgG_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 74.20 4.88 1.00 1 3 855.72388 2565.15708 -3.83 27.62 2843 2843 MS2 29/100 Linfeng_091811_SIN3A_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.26 4.88 1.00 1 2 738.39459 1475.78191 -2.31 29.97 6257 6257 MS2 18/22 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 51.37 4.88 1.00 1 2 651.86029 1302.71330 -1.45 45.40 5338 5338 MS2 19/22 Linfeng_091811_SIN3A_2.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 58.76 4.87 1.00 1 2 738.39398 1475.78069 -3.14 28.72 3018 3018 MS2 19/22 Linfeng_091811_SIN3A_10.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 78.61 4.87 1.00 1 2 670.83655 1340.66582 -2.58 19.13 1867 1867 MS2 19/22 Linfeng_091811_SIN3A_1.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 83.69 4.87 1.00 1 2 738.37469 1475.74211 -4.63 37.20 4193 4193 MS2 19/22 Linfeng_091611_rIgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 49.52 4.86 1.00 1 2 651.86047 1302.71367 -1.17 44.96 10892 10892 MS2 19/22 Linfeng_081211_IgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 90.20 4.86 1.00 1 3 861.05670 2581.15555 -2.43 28.17 5643 5643 MS2 25/100 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 65.30 4.86 1.00 1 2 738.39569 1475.78411 -0.82 28.31 5686 5686 MS2 19/22 Linfeng_081211_IgG_8.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 55.59 4.86 1.00 1 2 738.39386 1475.78044 -3.31 28.25 2927 2927 MS2 19/22 Linfeng_091811_SIN3A_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 78.04 4.85 1.00 1 2 670.83813 1340.66899 -0.22 21.38 3400 3400 MS2 19/22 Linfeng_081211_IgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 58.61 4.85 1.00 1 3 572.95416 1716.84793 -1.89 32.28 7111 7111 MS2 34/56 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.18 4.85 1.00 1 2 738.39447 1475.78166 -2.48 27.97 2989 2989 MS2 19/22 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 59.27 4.84 1.00 1 2 738.39368 1475.78008 -3.55 28.23 3165 3165 MS2 19/22 Linfeng_091811_SIN3A_4.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 55.24 4.84 1.00 1 3 615.65118 1844.93900 -3.88 27.81 2893 2893 MS2 29/60 Linfeng_091811_SIN3A_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 113.87 4.84 1.00 1 2 858.92615 1716.84502 -3.59 31.36 3546 3546 MS2 23/28 Linfeng_091811_SIN3A_1.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 53.75 4.84 1.00 1 3 533.94727 1599.82724 -4.07 34.76 4082 4082 MS2 27/52 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.27 4.84 1.00 1 2 738.39581 1475.78435 -0.66 32.20 5244 5244 MS2 20/22 Linfeng_081211_IgG_9.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 121.09 4.84 1.00 1 3 783.74347 2349.21585 -1.13 53.26 6355 6355 MS2 30/80 Linfeng_091611_rIgG_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 78.04 4.84 1.00 1 2 670.83673 1340.66619 -2.31 19.31 1974 1974 MS2 19/22 Linfeng_091611_rIgG_5.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 82.68 4.84 1.00 1 2 670.83771 1340.66814 -0.85 20.55 3003 3003 MS2 19/22 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 60.35 4.84 1.00 1 2 738.39471 1475.78215 -2.15 28.20 3156 3156 MS2 19/22 Linfeng_091611_rIgG_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 76.39 4.83 1.00 1 2 670.83679 1340.66631 -2.22 19.18 1780 1780 MS2 19/22 Linfeng_091611_rIgG_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 47.59 4.83 1.00 1 3 572.95557 1716.85215 0.56 31.38 6542 6542 MS2 30/56 Linfeng_081211_IgG_4.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 46.84 4.83 1.00 1 3 533.94983 1599.83493 0.74 47.02 8277 8277 MS2 21/52 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 62.34 4.83 1.00 1 2 738.39417 1475.78105 -2.89 28.28 3155 3155 MS2 19/22 Linfeng_091811_SIN3A_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 68.23 4.83 1.00 1 2 670.83771 1340.66814 -0.85 19.33 1893 1893 MS2 19/22 Linfeng_091811_SIN3A_3.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 44.47 4.82 1.00 1 3 553.26935 1657.79349 0.33 30.97 6396 6396 MS2 29/64 Linfeng_081211_IgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 101.78 4.82 1.00 1 3 861.05688 2581.15610 -2.22 26.32 2402 2402 MS2 26/100 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 46.46 4.82 1.00 1 2 738.39392 1475.78057 -3.22 27.95 3181 3181 MS2 19/22 Linfeng_091611_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 18.90 4.81 1.00 1 2 883.37018 1765.73308 -0.98 39.93 6188 6188 MS2 21/38 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 62.98 4.81 1.00 1 2 738.39532 1475.78337 -1.32 28.01 3072 3072 MS2 19/22 Linfeng_091611_rIgG_7.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 89.42 4.81 1.00 1 2 858.92798 1716.84868 -1.46 31.64 6625 6625 MS2 18/28 Linfeng_081211_IgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 46.67 4.81 1.00 1 3 795.32159 2383.95023 -0.73 24.32 4098 4098 MS2 27/120 Linfeng_081211_IgG_2.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 128.85 4.81 1.00 1 3 783.74316 2349.21494 -1.52 53.71 6206 6206 MS2 34/80 Linfeng_091811_SIN3A_9.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 65.69 4.81 1.00 1 2 670.83801 1340.66875 -0.40 20.22 3174 3174 MS2 19/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 62.76 4.80 1.00 1 2 738.39618 1475.78508 -0.16 34.27 7583 7583 MS2 18/22 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.78 4.80 1.00 1 2 738.39648 1475.78569 0.25 31.30 6119 6119 MS2 19/22 Linfeng_081211_IgG_2.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 40.56 4.80 1.00 1 3 553.26910 1657.79276 -0.11 31.96 6992 6992 MS2 32/64 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 68.47 4.80 1.00 1 2 651.86151 1302.71575 0.43 45.96 11131 11131 MS2 19/22 Linfeng_081211_IgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 56.98 4.79 1.00 1 2 738.39423 1475.78118 -2.81 28.04 3003 3003 MS2 19/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 61.67 4.79 1.00 1 2 738.39471 1475.78215 -2.15 28.02 2995 2995 MS2 19/22 Linfeng_091611_rIgG_9.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 51.49 4.78 1.00 1 3 533.94763 1599.82834 -3.38 35.26 4075 4075 MS2 24/52 Linfeng_091811_SIN3A_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 80.95 4.78 1.00 1 2 670.83661 1340.66594 -2.49 19.19 1966 1966 MS2 19/22 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 65.63 4.78 1.00 1 2 738.39240 1475.77751 -5.29 28.26 2955 2955 MS2 19/22 Linfeng_091811_SIN3A_10.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 55.19 4.78 1.00 1 2 651.86292 1302.71855 2.58 44.84 10932 10932 MS2 19/22 Linfeng_081211_IgG_10.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 8.99 4.78 1.00 1 3 728.71216 2184.12192 -1.69 42.46 4901 4901 MS2 18/72 Linfeng_091811_SIN3A_9.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 86.57 4.77 1.00 1 2 670.83929 1340.67131 1.51 21.66 3236 3236 MS2 19/22 Linfeng_081211_IgG_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 125.39 4.77 1.00 1 2 858.92847 1716.84966 -0.89 31.54 6625 6625 MS2 21/28 Linfeng_081211_IgG_6.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 101.30 4.77 1.00 1 2 858.92792 1716.84856 -1.53 27.83 5334 5334 MS2 18/28 Linfeng_081211_IgG_4.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 118.95 4.76 1.00 1 2 858.92639 1716.84551 -3.31 31.29 3591 3591 MS2 22/28 Linfeng_091611_rIgG_5.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 136.18 4.76 1.00 1 3 783.74420 2349.21805 -0.19 53.31 6248 6248 MS2 33/80 Linfeng_091611_rIgG_1.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 87.96 4.75 1.00 1 3 783.74310 2349.21476 -1.59 53.33 6264 6264 MS2 29/80 Linfeng_091611_rIgG_7.raw High LLRDYQELmNTK IPI:IPI00220327.4 1 1 CID M9(Oxidation) 4.34 4.75 1.00 1 3 513.92950 1539.77396 -6.27 26.22 2813 2813 MS2 21/44 Linfeng_091811_SIN3A_2.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 54.77 4.75 1.00 1 3 861.05554 2581.15207 -3.78 27.04 5080 5080 MS2 25/100 Linfeng_081211_IgG_7.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 50.35 4.75 1.00 1 2 679.35211 1357.69695 0.81 35.92 6025 6025 MS2 18/22 Linfeng_081211_IgG_9.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 120.82 4.75 1.00 1 3 783.74451 2349.21897 0.20 53.34 6197 6197 MS2 28/80 Linfeng_091611_rIgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 46.52 4.75 1.00 1 2 738.39612 1475.78496 -0.25 28.81 5633 5633 MS2 19/22 Linfeng_081211_IgG_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 75.33 4.74 1.00 1 2 670.83691 1340.66655 -2.04 19.21 2048 2048 MS2 19/22 Linfeng_091611_rIgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.57 4.74 1.00 1 2 738.39581 1475.78435 -0.66 30.63 5926 5926 MS2 19/22 Linfeng_081211_IgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 36.99 4.74 1.00 1 2 679.35114 1357.69499 -0.63 28.49 5538 5538 MS2 18/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 61.92 4.73 1.00 1 2 738.39539 1475.78349 -1.24 28.83 5516 5516 MS2 19/22 Linfeng_081211_IgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 84.48 4.73 1.00 1 3 855.72284 2565.15396 -5.04 27.31 3000 3000 MS2 26/100 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 51.03 4.73 1.00 1 2 738.39471 1475.78215 -2.15 27.95 2612 2612 MS2 19/22 Linfeng_091611_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 87.66 4.73 1.00 1 2 1192.47876 2383.95024 -0.73 21.56 3543 3543 MS2 18/60 Linfeng_081211_IgG_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 110.81 4.72 1.00 1 2 858.92682 1716.84636 -2.81 31.16 3026 3026 MS2 22/28 Linfeng_091611_rIgG_3.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 108.34 4.72 1.00 1 4 588.05994 2349.21792 -0.25 53.32 6249 6249 MS2 43/120 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 68.13 4.72 1.00 1 2 1192.48096 2383.95464 1.12 21.78 3216 3216 MS2 22/60 Linfeng_081211_IgG_9.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 70.64 4.72 1.00 1 3 553.26709 1657.78672 -3.76 30.87 3523 3523 MS2 30/64 Linfeng_091811_SIN3A_4.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 59.61 4.71 1.00 1 3 572.95435 1716.84848 -1.57 38.41 5760 5760 MS2 28/56 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 49.22 4.71 1.00 1 2 651.85956 1302.71184 -2.57 45.15 5508 5508 MS2 19/22 Linfeng_091611_rIgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 69.10 4.71 1.00 1 2 738.39648 1475.78569 0.25 31.32 5073 5073 MS2 19/22 Linfeng_081211_IgG_9.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 81.90 4.71 1.00 1 3 855.72546 2565.16184 -1.98 27.26 2522 2522 MS2 29/100 Linfeng_091611_rIgG_3.raw High SLDLDSIIAEVKAQYEDIAQK IPI:IPI00220327.4 1 1 CID 115.17 4.71 1.00 1 4 588.06110 2349.22255 1.73 53.79 6344 6344 MS2 46/120 Linfeng_091811_SIN3A_6.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 57.71 4.70 1.00 1 2 738.39252 1475.77776 -5.13 28.26 3054 3054 MS2 20/22 Linfeng_091811_SIN3A_9.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 62.64 4.70 1.00 1 2 670.83594 1340.66460 -3.49 19.06 1661 1661 MS2 18/22 Linfeng_091811_SIN3A_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 75.88 4.70 1.00 1 2 670.83734 1340.66741 -1.40 19.16 1780 1780 MS2 18/22 Linfeng_091611_rIgG_9.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 72.60 4.70 1.00 1 3 615.65106 1844.93863 -4.08 27.37 3103 3103 MS2 31/60 Linfeng_091611_rIgG_4.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 74.43 4.69 1.00 1 2 738.37592 1475.74455 -2.97 37.67 8694 8694 MS2 16/22 Linfeng_081211_IgG_7.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 104.29 4.69 1.00 1 2 738.37476 1475.74224 -4.54 37.49 4322 4322 MS2 18/22 Linfeng_091811_SIN3A_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 41.37 4.69 1.00 1 3 572.95508 1716.85068 -0.29 31.33 6543 6543 MS2 31/56 Linfeng_081211_IgG_10.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 108.03 4.68 1.00 1 2 858.92670 1716.84612 -2.95 31.47 3527 3527 MS2 22/28 Linfeng_091811_SIN3A_2.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 86.57 4.68 1.00 1 2 670.83612 1340.66496 -3.22 19.04 1733 1733 MS2 18/22 Linfeng_091811_SIN3A_8.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 52.35 4.68 1.00 1 3 572.95325 1716.84519 -3.49 31.41 3566 3566 MS2 32/56 Linfeng_091811_SIN3A_3.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 49.43 4.68 1.00 1 3 553.26862 1657.79129 -0.99 31.23 6483 6483 MS2 33/64 Linfeng_081211_IgG_7.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 79.29 4.68 1.00 1 2 800.42194 1599.83660 1.78 47.10 8300 8300 MS2 19/26 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 57.77 4.67 1.00 1 2 651.86035 1302.71343 -1.35 45.51 5383 5383 MS2 19/22 Linfeng_091811_SIN3A_6.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 17.20 4.67 1.00 1 3 615.65295 1844.94431 -1.00 27.80 5529 5529 MS2 28/60 Linfeng_081211_IgG_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 66.89 4.67 1.00 1 3 855.72443 2565.15873 -3.19 27.18 2886 2886 MS2 26/100 Linfeng_091611_rIgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 115.53 4.66 1.00 1 2 858.92853 1716.84978 -0.82 32.26 7103 7103 MS2 20/28 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 57.14 4.66 1.00 1 2 651.86041 1302.71355 -1.26 45.58 5289 5289 MS2 19/22 Linfeng_091811_SIN3A_9.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 61.92 4.66 1.00 1 2 738.39319 1475.77910 -4.22 28.37 3014 3014 MS2 19/22 Linfeng_091811_SIN3A_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 47.59 4.66 1.00 1 3 855.72632 2565.16440 -0.98 27.79 5318 5318 MS2 24/100 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 64.44 4.66 1.00 1 2 738.39435 1475.78142 -2.64 28.03 3273 3273 MS2 19/22 Linfeng_091611_rIgG_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 73.90 4.66 1.00 1 3 855.72528 2565.16129 -2.19 27.40 2991 2991 MS2 27/100 Linfeng_091611_rIgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 59.87 4.66 1.00 1 2 738.39441 1475.78154 -2.56 27.99 2781 2781 MS2 19/22 Linfeng_091611_rIgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 80.27 4.66 1.00 1 3 861.05878 2581.16178 -0.02 40.93 6498 6498 MS2 29/100 Linfeng_081211_IgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 66.35 4.65 1.00 1 3 572.95282 1716.84391 -4.24 31.16 3407 3407 MS2 32/56 Linfeng_091611_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 61.94 4.65 1.00 1 2 1192.48071 2383.95415 0.91 22.79 2676 2676 MS2 19/60 Linfeng_081211_IgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 96.83 4.65 1.00 1 2 997.49011 1993.97295 -1.89 45.44 5182 5182 MS2 21/30 Linfeng_091811_SIN3A_10.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 80.12 4.64 1.00 1 2 670.83807 1340.66887 -0.31 41.40 6624 6624 MS2 19/22 Linfeng_081211_IgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 74.39 4.64 1.00 1 2 639.35675 1277.70622 -2.98 43.24 5095 5095 MS2 18/20 Linfeng_091811_SIN3A_1.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 68.49 4.64 1.00 1 2 670.83832 1340.66936 0.06 19.08 1475 1475 MS2 18/22 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 66.07 4.64 1.00 1 2 738.39502 1475.78276 -1.73 36.99 5443 5443 MS2 19/22 Linfeng_081211_IgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 68.82 4.64 1.00 1 2 883.37006 1765.73284 -1.12 33.39 6753 6753 MS2 21/38 Linfeng_081211_IgG_2.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 81.32 4.64 1.00 1 2 670.83649 1340.66570 -2.67 19.51 1938 1938 MS2 19/22 Linfeng_091811_SIN3A_6.raw High LNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 109.15 4.64 1.00 1 3 647.99902 1941.98252 -2.67 42.31 4439 4439 MS2 31/64 Linfeng_091611_rIgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 49.02 4.64 1.00 1 2 651.85974 1302.71221 -2.29 45.12 5234 5234 MS2 19/22 Linfeng_091611_rIgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 48.41 4.64 1.00 1 3 572.95294 1716.84427 -4.02 31.17 3420 3420 MS2 31/56 Linfeng_091611_rIgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 54.34 4.64 1.00 1 2 651.86047 1302.71367 -1.17 45.35 5364 5364 MS2 19/22 Linfeng_091811_SIN3A_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 54.34 4.64 1.00 1 2 651.86072 1302.71416 -0.79 45.14 5192 5192 MS2 19/22 Linfeng_091611_rIgG_9.raw High SLVNLGGSKSISISVAR IPI:IPI00220327.4 1 1 CID 95.99 4.63 1.00 1 2 844.48822 1687.96916 -0.61 33.25 7160 7160 MS2 17/32 Linfeng_081211_IgG_10.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 46.77 4.63 1.00 1 2 679.35126 1357.69524 -0.45 34.00 7387 7387 MS2 18/22 Linfeng_081211_IgG_4.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 31.46 4.62 1.00 1 2 679.35095 1357.69463 -0.90 29.29 6000 6000 MS2 16/22 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 56.21 4.62 1.00 1 2 651.86053 1302.71379 -1.07 45.26 4970 4970 MS2 19/22 Linfeng_091611_rIgG_10.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 53.62 4.62 1.00 1 2 651.85992 1302.71257 -2.01 45.50 5190 5190 MS2 19/22 Linfeng_091811_SIN3A_10.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 68.44 4.62 1.00 1 4 546.78564 2184.12075 -2.23 41.98 4795 4795 MS2 43/108 Linfeng_091611_rIgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 50.90 4.62 1.00 1 2 651.86041 1302.71355 -1.26 45.15 5204 5204 MS2 19/22 Linfeng_091611_rIgG_2.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 81.56 4.62 1.00 1 3 615.65186 1844.94101 -2.78 27.37 2906 2906 MS2 32/60 Linfeng_091611_rIgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 53.42 4.62 1.00 1 2 651.86005 1302.71282 -1.82 45.57 5172 5172 MS2 19/22 Linfeng_091811_SIN3A_7.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 59.73 4.61 1.00 1 2 651.86090 1302.71453 -0.51 45.15 5283 5283 MS2 19/22 Linfeng_091611_rIgG_7.raw High LLRDYQELMNTK IPI:IPI00220327.4 1 1 CID 28.08 4.61 1.00 1 3 508.59988 1523.78510 -2.36 31.29 3512 3512 MS2 22/44 Linfeng_091611_rIgG_7.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 98.21 4.60 1.00 1 2 738.37726 1475.74724 -1.15 37.40 8419 8419 MS2 16/22 Linfeng_081211_IgG_5.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 55.92 4.60 1.00 1 3 572.95459 1716.84922 -1.14 31.68 6639 6639 MS2 31/56 Linfeng_081211_IgG_7.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 52.36 4.60 1.00 1 2 651.85980 1302.71233 -2.20 45.10 5419 5419 MS2 19/22 Linfeng_091611_rIgG_4.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 64.14 4.60 1.00 1 3 572.95398 1716.84739 -2.21 31.21 6695 6695 MS2 30/56 Linfeng_081211_IgG_8.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 60.73 4.59 1.00 1 2 651.86017 1302.71306 -1.64 45.13 4796 4796 MS2 19/22 Linfeng_091611_rIgG_3.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 16.94 4.59 1.00 1 3 572.95258 1716.84317 -4.66 31.72 3462 3462 MS2 27/56 Linfeng_091811_SIN3A_8.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 73.56 4.58 1.00 1 2 858.92908 1716.85088 -0.18 32.66 6511 6511 MS2 20/28 Linfeng_081211_IgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 50.28 4.58 1.00 1 2 651.86096 1302.71465 -0.42 44.90 10522 10522 MS2 19/22 Linfeng_081211_IgG_5.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 51.78 4.58 1.00 1 2 651.86041 1302.71355 -1.26 45.30 5382 5382 MS2 19/22 Linfeng_091611_rIgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.61 4.58 1.00 1 3 492.59863 1475.78135 -2.69 37.31 5515 5515 MS2 27/44 Linfeng_081211_IgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 58.69 4.57 1.00 1 3 572.95233 1716.84244 -5.09 31.28 3536 3536 MS2 31/56 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 76.51 4.57 1.00 1 2 639.35730 1277.70732 -2.12 40.03 4545 4545 MS2 18/20 Linfeng_091611_rIgG_9.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 75.32 4.57 1.00 1 2 800.42041 1599.83354 -0.13 37.87 9151 9151 MS2 17/26 Linfeng_081211_IgG_3.raw High LLRDYQELmNTK IPI:IPI00220327.4 1 1 CID M9(Oxidation) 6.84 4.56 1.00 1 3 513.92926 1539.77323 -6.75 26.02 2727 2727 MS2 20/44 Linfeng_091611_rIgG_9.raw High KQISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 69.24 4.55 1.00 1 3 615.65082 1844.93790 -4.47 27.81 2869 2869 MS2 29/60 Linfeng_091811_SIN3A_7.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 55.92 4.55 1.00 1 2 651.85999 1302.71269 -1.92 45.66 5246 5246 MS2 19/22 Linfeng_091811_SIN3A_8.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 42.42 4.55 1.00 1 3 762.71265 2286.12339 -0.67 33.37 7129 7129 MS2 22/76 Linfeng_081211_IgG_5.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 58.92 4.54 1.00 1 2 738.39655 1475.78581 0.33 34.19 7441 7441 MS2 19/22 Linfeng_081211_IgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 79.48 4.54 1.00 1 2 639.35760 1277.70793 -1.64 41.13 4452 4452 MS2 18/20 Linfeng_091611_rIgG_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID C5(Carbamidomethyl) 66.60 4.54 1.00 1 3 855.72504 2565.16056 -2.47 27.68 3090 3090 MS2 31/100 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 67.98 4.53 1.00 1 2 639.35693 1277.70659 -2.69 42.13 4953 4953 MS2 18/20 Linfeng_091811_SIN3A_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 50.41 4.52 1.00 1 2 651.85950 1302.71172 -2.67 45.30 5353 5353 MS2 19/22 Linfeng_091811_SIN3A_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 55.41 4.52 1.00 1 2 651.86090 1302.71453 -0.51 48.01 10990 10990 MS2 19/22 Linfeng_081211_IgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.93 4.52 1.00 1 2 639.35950 1277.71172 1.32 47.80 5672 5672 MS2 15/20 Linfeng_091811_SIN3A_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 68.12 4.51 1.00 1 2 639.35614 1277.70500 -3.93 41.03 4901 4901 MS2 18/20 Linfeng_091611_rIgG_4.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 85.32 4.50 1.00 1 2 738.38043 1475.75359 3.15 38.79 8273 8273 MS2 18/22 Linfeng_081211_IgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 58.33 4.50 1.00 1 2 651.86176 1302.71623 0.80 50.24 5947 5947 MS2 18/22 Linfeng_091811_SIN3A_2.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 54.47 4.50 1.00 1 2 738.37427 1475.74126 -5.21 37.55 4177 4177 MS2 16/22 Linfeng_091811_SIN3A_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 73.22 4.50 1.00 1 2 639.35693 1277.70659 -2.69 40.41 4641 4641 MS2 18/20 Linfeng_091811_SIN3A_9.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 29.57 4.49 1.00 1 3 665.33173 1993.98062 1.96 49.16 11782 11782 MS2 23/60 Linfeng_081211_IgG_8.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 49.06 4.48 1.00 1 3 453.23648 1357.69489 -0.71 33.83 7621 7621 MS2 28/44 Linfeng_081211_IgG_8.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 72.43 4.48 1.00 1 2 639.35718 1277.70708 -2.31 40.09 4321 4321 MS2 18/20 Linfeng_091611_rIgG_10.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 95.53 4.48 1.00 1 2 997.48932 1993.97136 -2.68 45.37 5362 5362 MS2 19/30 Linfeng_091811_SIN3A_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 55.52 4.48 1.00 1 2 651.85986 1302.71245 -2.10 45.40 5553 5553 MS2 19/22 Linfeng_091811_SIN3A_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 70.38 4.48 1.00 1 2 639.35736 1277.70745 -2.02 41.35 4664 4664 MS2 18/20 Linfeng_091811_SIN3A_10.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 48.93 4.47 1.00 1 2 651.86023 1302.71318 -1.54 48.73 5783 5783 MS2 18/22 Linfeng_091811_SIN3A_1.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 53.52 4.47 1.00 1 2 738.37750 1475.74773 -0.82 45.27 7762 7762 MS2 17/22 Linfeng_081211_IgG_1.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 111.94 4.47 1.00 1 2 738.37585 1475.74443 -3.06 37.47 4511 4511 MS2 17/22 Linfeng_091811_SIN3A_5.raw High LLRDYQELmNTK IPI:IPI00220327.4 1 1 CID M9(Oxidation) 33.92 4.47 1.00 1 3 513.92926 1539.77323 -6.75 26.07 2830 2830 MS2 21/44 Linfeng_091811_SIN3A_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 34.29 4.46 1.00 1 3 795.32379 2383.95682 2.03 22.75 3574 3574 MS2 25/120 Linfeng_081211_IgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.08 4.46 1.00 1 2 639.35828 1277.70928 -0.59 50.87 5918 5918 MS2 15/20 Linfeng_091611_rIgG_2.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 82.90 4.46 1.00 1 2 670.83691 1340.66655 -2.04 19.53 1856 1856 MS2 18/22 Linfeng_091811_SIN3A_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 57.36 4.46 1.00 1 2 651.86334 1302.71941 3.24 50.50 9159 9159 MS2 19/22 Linfeng_081211_IgG_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 63.59 4.46 1.00 1 2 858.92859 1716.84990 -0.75 28.92 5404 5404 MS2 16/28 Linfeng_081211_IgG_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 65.34 4.46 1.00 1 2 858.92871 1716.85015 -0.60 33.73 5571 5571 MS2 18/28 Linfeng_081211_IgG_9.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 42.26 4.46 1.00 1 2 692.34778 1383.68828 -1.50 37.48 8445 8445 MS2 18/22 Linfeng_081211_IgG_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 68.36 4.45 1.00 1 2 639.35791 1277.70854 -1.16 40.26 9340 9340 MS2 18/20 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 49.18 4.45 1.00 1 2 651.85986 1302.71245 -2.10 46.34 5484 5484 MS2 19/22 Linfeng_091811_SIN3A_1.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 76.24 4.45 1.00 1 2 670.83557 1340.66387 -4.04 19.46 2047 2047 MS2 19/22 Linfeng_091811_SIN3A_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 77.19 4.45 1.00 1 2 639.35785 1277.70842 -1.26 42.32 4847 4847 MS2 18/20 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 79.33 4.45 1.00 1 2 800.41998 1599.83269 -0.66 35.33 8142 8142 MS2 22/26 Linfeng_081211_IgG_8.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 58.29 4.45 1.00 1 2 639.35858 1277.70989 -0.11 48.83 5662 5662 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 60.43 4.44 1.00 1 2 639.35699 1277.70671 -2.60 41.28 4866 4866 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 61.07 4.44 1.00 1 2 639.35687 1277.70647 -2.79 47.51 5532 5532 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 76.30 4.44 1.00 1 2 639.35767 1277.70806 -1.55 40.08 4640 4640 MS2 18/20 Linfeng_091611_rIgG_7.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 58.74 4.44 1.00 1 2 651.86060 1302.71391 -0.98 50.14 5959 5959 MS2 18/22 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 68.17 4.44 1.00 1 2 639.35913 1277.71099 0.75 40.34 9594 9594 MS2 17/20 Linfeng_081211_IgG_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR IPI:IPI00220327.4 1 1 CID 109.35 4.43 1.00 1 2 1192.47913 2383.95098 -0.42 21.86 3389 3389 MS2 21/60 Linfeng_081211_IgG_5.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 67.03 4.43 1.00 1 2 697.36761 1393.72795 -3.07 25.15 2663 2663 MS2 18/22 Linfeng_091811_SIN3A_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 72.54 4.43 1.00 1 2 639.35645 1277.70561 -3.46 40.34 4730 4730 MS2 18/20 Linfeng_091811_SIN3A_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 71.43 4.43 1.00 1 2 670.83905 1340.67082 1.15 19.28 1627 1627 MS2 16/22 Linfeng_091611_rIgG_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 71.04 4.42 1.00 1 2 639.35693 1277.70659 -2.69 41.11 4822 4822 MS2 18/20 Linfeng_091811_SIN3A_1.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 61.35 4.42 1.00 1 3 572.95416 1716.84793 -1.89 31.57 6634 6634 MS2 29/56 Linfeng_081211_IgG_6.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 48.99 4.42 1.00 1 2 651.85974 1302.71221 -2.29 45.18 5381 5381 MS2 19/22 Linfeng_091611_rIgG_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 71.66 4.42 1.00 1 2 639.35608 1277.70488 -4.03 40.29 4529 4529 MS2 18/20 Linfeng_091811_SIN3A_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 73.64 4.42 1.00 1 2 639.35596 1277.70464 -4.22 41.11 4715 4715 MS2 18/20 Linfeng_091611_rIgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 42.53 4.40 1.00 1 2 738.39606 1475.78484 -0.33 42.58 6951 6951 MS2 19/22 Linfeng_081211_IgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 69.41 4.39 1.00 1 2 639.35724 1277.70720 -2.22 40.09 4697 4697 MS2 18/20 Linfeng_091811_SIN3A_3.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 58.36 4.39 1.00 1 2 829.39905 1657.79082 -1.28 39.42 6029 6029 MS2 17/32 Linfeng_081211_IgG_1.raw High LNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 57.80 4.39 1.00 1 3 648.00037 1941.98655 -0.60 42.08 9776 9776 MS2 25/64 Linfeng_081211_IgG_5.raw High AEAESLYQSKYEELQITAGR IPI:IPI00220327.4 1 1 CID 11.89 4.39 1.00 1 3 762.71027 2286.11625 -3.79 33.29 3801 3801 MS2 21/76 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 51.08 4.39 1.00 1 2 639.35730 1277.70732 -2.12 46.84 5415 5415 MS2 16/20 Linfeng_091611_rIgG_2.raw High NKLNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 5.58 4.39 1.00 1 3 728.71173 2184.12064 -2.28 42.43 4998 4998 MS2 16/72 Linfeng_091811_SIN3A_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 71.25 4.39 1.00 1 2 639.35730 1277.70732 -2.12 40.26 4734 4734 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 79.65 4.38 1.00 1 2 639.35754 1277.70781 -1.74 41.27 4714 4714 MS2 18/20 Linfeng_091611_rIgG_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 55.57 4.38 1.00 1 2 692.34863 1383.68999 -0.27 37.44 8771 8771 MS2 17/22 Linfeng_081211_IgG_8.raw High LLRDYQELmNTK IPI:IPI00220327.4 1 1 CID M9(Oxidation) 3.46 4.38 1.00 1 3 513.92871 1539.77158 -7.82 26.34 2890 2890 MS2 20/44 Linfeng_091811_SIN3A_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.23 4.38 1.00 1 2 639.35748 1277.70769 -1.83 43.35 4979 4979 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 73.29 4.38 1.00 1 2 639.35663 1277.70598 -3.17 39.89 4132 4132 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 77.06 4.38 1.00 1 2 639.35663 1277.70598 -3.17 40.43 4592 4592 MS2 18/20 Linfeng_091811_SIN3A_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.89 4.38 1.00 1 2 738.39496 1475.78264 -1.82 31.93 6979 6979 MS2 15/22 Linfeng_081211_IgG_3.raw High SLNNQFASFIDKVR IPI:IPI00220327.4 1 1 CID 70.26 4.37 1.00 1 2 819.93420 1638.86113 0.75 39.21 9012 9012 MS2 17/26 Linfeng_081211_IgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 65.38 4.37 1.00 1 2 639.35651 1277.70574 -3.36 40.11 4694 4694 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 74.05 4.37 1.00 1 2 639.35608 1277.70488 -4.03 41.10 4286 4286 MS2 18/20 Linfeng_091611_rIgG_3.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 87.87 4.37 1.00 1 2 697.36975 1393.73223 0.00 43.69 7264 7264 MS2 19/22 Linfeng_081211_IgG_1.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 41.12 4.37 1.00 1 2 679.35278 1357.69829 1.80 37.04 7760 7760 MS2 18/22 Linfeng_081211_IgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 78.75 4.37 1.00 1 2 639.35675 1277.70622 -2.98 40.12 4662 4662 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LDSELKNmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M8(Oxidation), M11(Oxidation)" 70.02 4.37 1.00 1 3 673.29962 2017.88431 0.04 41.20 6569 6569 MS2 23/60 Linfeng_081211_IgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 46.04 4.36 1.00 1 2 639.35779 1277.70830 -1.36 45.45 5463 5463 MS2 17/20 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 76.07 4.36 1.00 1 2 639.35681 1277.70635 -2.88 39.96 4760 4760 MS2 18/20 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 75.43 4.36 1.00 1 2 639.35663 1277.70598 -3.17 45.36 5361 5361 MS2 18/20 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 78.59 4.36 1.00 1 2 738.39624 1475.78520 -0.08 30.31 4878 4878 MS2 17/22 Linfeng_081211_IgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 60.74 4.36 1.00 1 2 639.35657 1277.70586 -3.27 42.75 5002 5002 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 56.40 4.35 1.00 1 2 639.35767 1277.70806 -1.55 49.16 5733 5733 MS2 18/20 Linfeng_091611_rIgG_1.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 79.97 4.35 1.00 1 2 697.36780 1393.72832 -2.81 24.94 2682 2682 MS2 17/22 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 67.31 4.35 1.00 1 2 639.35657 1277.70586 -3.27 40.36 4515 4515 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 56.99 4.35 1.00 1 2 639.35773 1277.70818 -1.45 50.07 5785 5785 MS2 15/20 Linfeng_091611_rIgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 76.32 4.35 1.00 1 2 651.86017 1302.71306 -1.64 46.41 5361 5361 MS2 18/22 Linfeng_091611_rIgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 55.64 4.35 1.00 1 2 651.86047 1302.71367 -1.17 45.38 5398 5398 MS2 18/22 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 65.43 4.35 1.00 1 2 639.35699 1277.70671 -2.60 43.36 5114 5114 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LNDLEDALQQAKEDLAR IPI:IPI00220327.4 1 1 CID 61.15 4.35 1.00 1 3 647.99927 1941.98325 -2.30 42.51 5002 5002 MS2 28/64 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 58.16 4.35 1.00 1 2 639.35730 1277.70732 -2.12 40.18 4732 4732 MS2 18/20 Linfeng_091611_rIgG_6.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 44.54 4.34 1.00 1 2 692.34491 1383.68254 -5.65 37.22 4204 4204 MS2 17/22 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 71.18 4.34 1.00 1 2 639.35651 1277.70574 -3.36 41.19 4801 4801 MS2 18/20 Linfeng_091811_SIN3A_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.21 4.34 1.00 1 2 639.35986 1277.71245 1.89 54.39 6420 6420 MS2 15/20 Linfeng_091811_SIN3A_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 53.18 4.34 1.00 1 2 692.34564 1383.68401 -4.59 37.58 4334 4334 MS2 17/22 Linfeng_091811_SIN3A_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.05 4.34 1.00 1 2 639.35736 1277.70745 -2.02 40.08 4863 4863 MS2 18/20 Linfeng_091611_rIgG_8.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.20 4.34 1.00 1 2 639.35870 1277.71013 0.08 55.48 6559 6559 MS2 17/20 Linfeng_091811_SIN3A_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 61.60 4.33 1.00 1 2 639.35638 1277.70549 -3.55 40.02 4574 4574 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 76.92 4.32 1.00 1 2 639.35590 1277.70452 -4.32 41.56 4668 4668 MS2 18/20 Linfeng_091811_SIN3A_7.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 66.07 4.32 1.00 1 2 639.35980 1277.71233 1.80 54.48 5929 5929 MS2 18/20 Linfeng_091611_rIgG_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 50.19 4.31 1.00 1 2 692.34821 1383.68913 -0.89 38.52 9362 9362 MS2 16/22 Linfeng_081211_IgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.17 4.31 1.00 1 2 639.35968 1277.71208 1.61 54.36 6260 6260 MS2 15/20 Linfeng_091611_rIgG_9.raw High LLRDYQELmNTK IPI:IPI00220327.4 1 1 CID M9(Oxidation) 20.63 4.31 1.00 1 3 513.92896 1539.77231 -7.34 26.34 2903 2903 MS2 21/44 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.60 4.31 1.00 1 2 639.35803 1277.70879 -0.97 41.21 4786 4786 MS2 18/20 Linfeng_091611_rIgG_7.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.75 4.30 1.00 1 2 590.30304 1179.59880 -1.41 37.61 5573 5573 MS2 17/18 Linfeng_081211_IgG_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 57.71 4.30 1.00 1 2 692.34521 1383.68315 -5.21 37.56 4523 4523 MS2 17/22 Linfeng_091811_SIN3A_5.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 38.57 4.30 1.00 1 2 679.35065 1357.69402 -1.35 35.16 7219 7219 MS2 18/22 Linfeng_081211_IgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 37.45 4.30 1.00 1 3 453.23685 1357.69599 0.10 34.80 8070 8070 MS2 26/44 Linfeng_081211_IgG_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 44.51 4.30 1.00 1 2 692.34491 1383.68254 -5.65 37.26 3795 3795 MS2 19/22 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 60.55 4.30 1.00 1 2 639.35754 1277.70781 -1.74 46.40 5492 5492 MS2 17/20 Linfeng_091811_SIN3A_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 51.94 4.30 1.00 1 2 692.34564 1383.68401 -4.59 37.74 4411 4411 MS2 17/22 Linfeng_091811_SIN3A_4.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 40.78 4.29 1.00 1 2 692.34509 1383.68291 -5.39 37.30 4193 4193 MS2 18/22 Linfeng_091611_rIgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 69.47 4.29 1.00 1 2 639.35681 1277.70635 -2.88 40.13 4735 4735 MS2 18/20 Linfeng_091611_rIgG_5.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 55.89 4.28 1.00 1 2 692.34735 1383.68743 -2.12 37.31 4500 4500 MS2 17/22 Linfeng_091611_rIgG_8.raw High LLRDYQELMNTK IPI:IPI00220327.4 1 1 CID 42.98 4.28 1.00 1 3 508.59982 1523.78492 -2.48 31.48 3575 3575 MS2 16/44 Linfeng_091811_SIN3A_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 39.06 4.28 1.00 1 2 692.34631 1383.68535 -3.62 37.38 3974 3974 MS2 19/22 Linfeng_091611_rIgG_10.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 84.78 4.28 1.00 1 2 829.39807 1657.78887 -2.46 30.59 2954 2954 MS2 18/32 Linfeng_091611_rIgG_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 50.60 4.28 1.00 1 2 692.34821 1383.68913 -0.89 37.27 8463 8463 MS2 17/22 Linfeng_081211_IgG_10.raw High FLEQQNQVLQTK IPI:IPI00220327.4 3 1 CID 67.62 4.28 1.00 1 3 492.59875 1475.78171 -2.45 28.17 3126 3126 MS2 25/44 Linfeng_091811_SIN3A_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 41.57 4.28 1.00 1 2 692.34497 1383.68266 -5.56 37.79 4306 4306 MS2 18/22 Linfeng_091811_SIN3A_9.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 78.13 4.28 1.00 1 2 738.37891 1475.75054 1.08 37.12 8519 8519 MS2 17/22 Linfeng_081211_IgG_6.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 47.70 4.28 1.00 1 2 692.34491 1383.68254 -5.65 37.22 4404 4404 MS2 18/22 Linfeng_091611_rIgG_4.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 44.86 4.28 1.00 1 2 590.30206 1179.59685 -3.07 28.64 2700 2700 MS2 17/18 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.26 4.28 1.00 1 2 639.35791 1277.70854 -1.16 55.00 6451 6451 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 53.03 4.28 1.00 1 2 639.35669 1277.70610 -3.08 45.08 5331 5331 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 77.31 4.28 1.00 1 2 639.35699 1277.70671 -2.60 41.07 4677 4677 MS2 18/20 Linfeng_091611_rIgG_9.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 58.30 4.27 1.00 1 2 692.34857 1383.68987 -0.36 37.73 8548 8548 MS2 17/22 Linfeng_081211_IgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4 3 2 CID 34.37 4.27 1.00 1 2 738.39459 1475.78191 -2.31 28.37 3238 3238 MS2 19/22 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 48.36 4.27 1.00 1 2 639.35736 1277.70745 -2.02 57.72 6821 6821 MS2 15/20 Linfeng_091611_rIgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 78.06 4.27 1.00 1 3 861.05652 2581.15500 -2.64 26.57 5155 5155 MS2 24/100 Linfeng_081211_IgG_8.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 48.36 4.27 1.00 1 3 533.94965 1599.83438 0.40 37.45 8634 8634 MS2 22/52 Linfeng_081211_IgG_6.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 55.32 4.27 1.00 1 2 692.34637 1383.68547 -3.53 37.45 4388 4388 MS2 19/22 Linfeng_091611_rIgG_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 53.62 4.27 1.00 1 2 639.35754 1277.70781 -1.74 50.20 5426 5426 MS2 15/20 Linfeng_091611_rIgG_3.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 67.22 4.26 1.00 1 2 697.36780 1393.72832 -2.81 27.36 5451 5451 MS2 15/22 Linfeng_081211_IgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.23 4.26 1.00 1 2 639.35779 1277.70830 -1.36 42.61 4875 4875 MS2 18/20 Linfeng_091611_rIgG_9.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 50.28 4.26 1.00 1 2 692.34552 1383.68376 -4.77 37.78 4248 4248 MS2 18/22 Linfeng_091811_SIN3A_8.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 50.87 4.25 1.00 1 2 639.35852 1277.70976 -0.21 56.53 6145 6145 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.26 4.25 1.00 1 2 639.35773 1277.70818 -1.45 56.99 6644 6644 MS2 18/20 Linfeng_091611_rIgG_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 58.35 4.25 1.00 1 2 692.34454 1383.68181 -6.18 37.42 4342 4342 MS2 17/22 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 63.44 4.24 1.00 1 2 639.35791 1277.70854 -1.16 57.20 6548 6548 MS2 18/20 Linfeng_091611_rIgG_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 43.26 4.24 1.00 1 2 692.34503 1383.68279 -5.47 37.70 4391 4391 MS2 18/22 Linfeng_091811_SIN3A_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 80.54 4.24 1.00 1 2 639.35883 1277.71037 0.27 53.92 6249 6249 MS2 18/20 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 65.19 4.24 1.00 1 2 639.35760 1277.70793 -1.64 45.30 5325 5325 MS2 17/20 Linfeng_091811_SIN3A_2.raw High NKLNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 89.61 4.24 1.00 1 2 800.41815 1599.82903 -2.95 35.30 3889 3889 MS2 19/26 Linfeng_091811_SIN3A_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 62.40 4.24 1.00 1 2 639.35944 1277.71160 1.22 47.04 5431 5431 MS2 15/20 Linfeng_091611_rIgG_9.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 42.60 4.24 1.00 1 2 692.34491 1383.68254 -5.65 37.71 4173 4173 MS2 18/22 Linfeng_091811_SIN3A_7.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.71 4.23 1.00 1 2 639.35876 1277.71025 0.17 53.30 6162 6162 MS2 17/20 Linfeng_091611_rIgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 52.12 4.23 1.00 1 2 639.35699 1277.70671 -2.60 58.44 7078 7078 MS2 16/20 Linfeng_091811_SIN3A_5.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 59.45 4.23 1.00 1 2 651.86078 1302.71428 -0.70 50.01 5809 5809 MS2 18/22 Linfeng_091611_rIgG_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 52.24 4.23 1.00 1 2 692.34460 1383.68193 -6.09 37.69 4196 4196 MS2 18/22 Linfeng_091811_SIN3A_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 44.05 4.23 1.00 1 2 639.35828 1277.70928 -0.59 50.81 6046 6046 MS2 18/20 Linfeng_091811_SIN3A_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 50.91 4.23 1.00 1 2 692.34479 1383.68230 -5.83 37.36 4291 4291 MS2 18/22 Linfeng_091611_rIgG_7.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 61.27 4.23 1.00 1 2 692.34814 1383.68901 -0.97 37.77 8726 8726 MS2 17/22 Linfeng_081211_IgG_7.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 40.37 4.23 1.00 1 2 639.35785 1277.70842 -1.26 46.96 5535 5535 MS2 15/20 Linfeng_091811_SIN3A_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 49.29 4.23 1.00 1 2 692.34790 1383.68852 -1.33 38.89 9061 9061 MS2 18/22 Linfeng_081211_IgG_6.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 84.09 4.22 1.00 1 2 697.36792 1393.72856 -2.63 25.29 2529 2529 MS2 16/22 Linfeng_091811_SIN3A_7.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 31.44 4.22 1.00 1 2 639.35651 1277.70574 -3.36 44.25 5222 5222 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 64.31 4.22 1.00 1 2 639.35675 1277.70622 -2.98 46.01 4908 4908 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 63.92 4.22 1.00 1 2 639.35681 1277.70635 -2.88 42.34 4984 4984 MS2 18/20 Linfeng_091811_SIN3A_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 73.74 4.22 1.00 1 2 639.35693 1277.70659 -2.69 44.58 4727 4727 MS2 17/20 Linfeng_091611_rIgG_3.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.36 4.22 1.00 1 2 590.30188 1179.59648 -3.38 28.64 3081 3081 MS2 17/18 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.53 4.21 1.00 1 2 639.35724 1277.70720 -2.22 54.73 6304 6304 MS2 16/20 Linfeng_091611_rIgG_9.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 72.28 4.21 1.00 1 2 697.36841 1393.72954 -1.93 25.92 4578 4578 MS2 16/22 Linfeng_081211_IgG_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 81.93 4.21 1.00 1 2 639.35645 1277.70561 -3.46 42.51 4466 4466 MS2 18/20 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 76.91 4.21 1.00 1 2 639.35736 1277.70745 -2.02 40.28 4886 4886 MS2 18/20 Linfeng_091811_SIN3A_5.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 32.60 4.21 1.00 1 2 590.30225 1179.59722 -2.76 29.43 2804 2804 MS2 17/18 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 74.05 4.21 1.00 1 2 639.35632 1277.70537 -3.65 42.42 4886 4886 MS2 18/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 51.76 4.20 1.00 1 2 639.35785 1277.70842 -1.26 51.80 6160 6160 MS2 16/20 Linfeng_091811_SIN3A_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 51.68 4.20 1.00 1 2 692.34552 1383.68376 -4.77 37.50 4362 4362 MS2 18/22 Linfeng_091811_SIN3A_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 63.73 4.20 1.00 1 2 639.35846 1277.70964 -0.30 47.82 5536 5536 MS2 16/20 Linfeng_091611_rIgG_2.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 32.23 4.20 1.00 1 2 679.35242 1357.69756 1.26 36.74 8750 8750 MS2 14/22 Linfeng_081211_IgG_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 75.75 4.20 1.00 1 2 651.86072 1302.71416 -0.79 48.51 5842 5842 MS2 18/22 Linfeng_091611_rIgG_4.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 55.58 4.20 1.00 1 2 692.34570 1383.68413 -4.50 37.51 4385 4385 MS2 18/22 Linfeng_091611_rIgG_6.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 77.71 4.19 1.00 1 2 670.83655 1340.66582 -2.58 18.81 1638 1638 MS2 18/22 Linfeng_091811_SIN3A_10.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.05 4.19 1.00 1 2 590.30359 1179.59990 -0.48 32.43 5296 5296 MS2 16/18 Linfeng_081211_IgG_9.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 57.06 4.19 1.00 1 2 692.34521 1383.68315 -5.21 37.32 4209 4209 MS2 18/22 Linfeng_091611_rIgG_2.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.87 4.19 1.00 1 2 738.39661 1475.78594 0.42 26.20 4887 4887 MS2 17/22 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 62.85 4.19 1.00 1 2 651.86273 1302.71819 2.30 45.94 11823 11823 MS2 18/22 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 53.51 4.19 1.00 1 2 590.30389 1179.60051 0.03 31.42 5096 5096 MS2 16/18 Linfeng_081211_IgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 69.60 4.19 1.00 1 2 651.86145 1302.71562 0.33 49.49 8905 8905 MS2 18/22 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 47.72 4.19 1.00 1 2 590.30298 1179.59868 -1.52 30.35 6074 6074 MS2 16/18 Linfeng_081211_IgG_5.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 105.34 4.19 1.00 1 2 697.36700 1393.72673 -3.95 25.34 2755 2755 MS2 17/22 Linfeng_091811_SIN3A_6.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 56.73 4.19 1.00 1 2 651.86066 1302.71404 -0.89 47.94 11298 11298 MS2 17/22 Linfeng_081211_IgG_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 54.51 4.18 1.00 1 2 639.35699 1277.70671 -2.60 41.23 4842 4842 MS2 18/20 Linfeng_091811_SIN3A_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 45.34 4.18 1.00 1 2 692.34839 1383.68950 -0.62 37.87 8765 8765 MS2 17/22 Linfeng_081211_IgG_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.60 4.18 1.00 1 2 639.35822 1277.70915 -0.69 45.71 5263 5263 MS2 15/20 Linfeng_091611_rIgG_9.raw High SLVNLGGSKSISISVAR IPI:IPI00220327.4 1 1 CID 61.67 4.18 1.00 1 3 563.32764 1687.96836 -1.09 33.25 7157 7157 MS2 29/64 Linfeng_081211_IgG_10.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 32.28 4.18 1.00 1 2 692.34918 1383.69109 0.52 42.35 10116 10116 MS2 15/22 Linfeng_081211_IgG_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 36.37 4.17 1.00 1 3 861.05518 2581.15097 -4.20 26.71 5073 5073 MS2 20/100 Linfeng_081211_IgG_10.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 72.51 4.17 1.00 1 2 639.35864 1277.71001 -0.02 45.63 5263 5263 MS2 16/20 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 77.88 4.17 1.00 1 2 639.35797 1277.70867 -1.07 40.14 9229 9229 MS2 17/20 Linfeng_081211_IgG_5.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 53.76 4.17 1.00 1 3 453.23672 1357.69562 -0.17 34.19 7551 7551 MS2 26/44 Linfeng_081211_IgG_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 51.47 4.17 1.00 1 2 639.35846 1277.70964 -0.30 51.21 5551 5551 MS2 16/20 Linfeng_091611_rIgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 40.65 4.16 1.00 1 2 738.39563 1475.78398 -0.91 32.31 6419 6419 MS2 16/22 Linfeng_081211_IgG_2.raw High mSGEcAPNVSVSVSTSHTTISGGGSR IPI:IPI00220327.4 1 1 CID "M1(Oxidation), C5(Carbamidomethyl)" 40.56 4.16 1.00 1 3 861.05750 2581.15793 -1.51 29.23 5977 5977 MS2 24/100 Linfeng_081211_IgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.44 4.16 1.00 1 2 639.35907 1277.71086 0.65 53.41 5818 5818 MS2 17/20 Linfeng_091611_rIgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.78 4.16 1.00 1 2 639.35858 1277.70989 -0.11 51.02 6045 6045 MS2 16/20 Linfeng_091811_SIN3A_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 74.75 4.16 1.00 1 2 651.86078 1302.71428 -0.70 49.91 5824 5824 MS2 18/22 Linfeng_091611_rIgG_1.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 78.75 4.16 1.00 1 2 697.36713 1393.72698 -3.77 24.94 2772 2772 MS2 17/22 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 46.75 4.16 1.00 1 2 639.35803 1277.70879 -0.97 51.16 5918 5918 MS2 16/20 Linfeng_091611_rIgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 50.19 4.15 1.00 1 2 639.35748 1277.70769 -1.83 49.79 5916 5916 MS2 18/20 Linfeng_091811_SIN3A_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 61.74 4.15 1.00 1 2 651.86298 1302.71868 2.67 51.53 9383 9383 MS2 16/22 Linfeng_081211_IgG_1.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 66.54 4.15 1.00 1 2 697.36761 1393.72795 -3.07 24.96 2587 2587 MS2 18/22 Linfeng_091611_rIgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 56.10 4.15 1.00 1 2 639.35889 1277.71050 0.36 50.84 6048 6048 MS2 15/20 Linfeng_091811_SIN3A_3.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 49.68 4.15 1.00 1 2 829.39813 1657.78899 -2.38 31.36 6383 6383 MS2 18/32 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 46.87 4.15 1.00 1 2 590.30219 1179.59709 -2.86 28.87 3248 3248 MS2 17/18 Linfeng_091611_rIgG_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 70.88 4.15 1.00 1 2 639.35748 1277.70769 -1.83 47.71 5656 5656 MS2 17/20 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.55 4.15 1.00 1 2 639.35938 1277.71147 1.13 51.67 6046 6046 MS2 16/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 64.79 4.14 1.00 1 2 639.35864 1277.71001 -0.02 53.71 6297 6297 MS2 16/20 Linfeng_091611_rIgG_1.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.33 4.14 1.00 1 2 590.30170 1179.59612 -3.69 28.58 3265 3265 MS2 17/18 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 51.36 4.14 1.00 1 2 639.35663 1277.70598 -3.17 58.99 6872 6872 MS2 18/20 Linfeng_091811_SIN3A_1.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 68.19 4.14 1.00 1 2 697.36768 1393.72807 -2.98 25.24 2722 2722 MS2 17/22 Linfeng_091811_SIN3A_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 48.16 4.13 1.00 1 2 639.35895 1277.71062 0.46 53.39 6431 6431 MS2 17/20 Linfeng_091611_rIgG_4.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 77.98 4.13 1.00 1 2 546.75293 1092.49858 -3.96 0.58 82 82 MS2 20/26 Linfeng_091811_SIN3A_8.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 25.66 4.13 1.00 1 2 679.35022 1357.69316 -1.98 29.57 5593 5593 MS2 17/22 Linfeng_081211_IgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 53.88 4.13 1.00 1 2 639.35950 1277.71172 1.32 53.89 6378 6378 MS2 18/20 Linfeng_091811_SIN3A_1.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 52.28 4.13 1.00 1 2 546.75433 1092.50139 -1.39 3.52 365 365 MS2 20/26 Linfeng_091811_SIN3A_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 46.22 4.13 1.00 1 2 590.30200 1179.59673 -3.17 28.68 3186 3186 MS2 17/18 Linfeng_091811_SIN3A_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 56.73 4.12 1.00 1 2 738.39594 1475.78459 -0.49 25.12 4530 4530 MS2 17/22 Linfeng_081211_IgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 71.97 4.12 1.00 1 2 639.35754 1277.70781 -1.74 40.23 4581 4581 MS2 18/20 Linfeng_091611_rIgG_2.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 45.79 4.12 1.00 1 2 590.30219 1179.59709 -2.86 28.72 3166 3166 MS2 17/18 Linfeng_091611_rIgG_7.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 44.57 4.12 1.00 1 2 692.34900 1383.69072 0.26 39.48 8468 8468 MS2 18/22 Linfeng_081211_IgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 45.33 4.12 1.00 1 2 639.35718 1277.70708 -2.31 48.76 5787 5787 MS2 18/20 Linfeng_091811_SIN3A_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 66.71 4.12 1.00 1 2 639.35931 1277.71135 1.03 54.32 6396 6396 MS2 18/20 Linfeng_091811_SIN3A_3.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 57.55 4.12 1.00 1 2 692.34882 1383.69036 0.00 42.68 10769 10769 MS2 15/22 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 50.22 4.12 1.00 1 2 590.30261 1179.59795 -2.14 28.70 2874 2874 MS2 17/18 Linfeng_091611_rIgG_10.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 65.88 4.12 1.00 1 2 697.36676 1393.72624 -4.30 25.27 2858 2858 MS2 16/22 Linfeng_091811_SIN3A_5.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 55.76 4.12 1.00 1 2 639.35718 1277.70708 -2.31 47.57 5724 5724 MS2 16/20 Linfeng_091611_rIgG_4.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.78 4.12 1.00 1 2 738.39673 1475.78618 0.58 29.55 5588 5588 MS2 16/22 Linfeng_081211_IgG_2.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 67.61 4.11 1.00 1 2 697.36847 1393.72966 -1.84 24.94 2587 2587 MS2 17/22 Linfeng_091611_rIgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 60.61 4.11 1.00 1 2 639.35712 1277.70696 -2.41 52.88 6281 6281 MS2 17/20 Linfeng_091811_SIN3A_1.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 29.92 4.11 1.00 1 3 447.56137 1340.66956 0.21 20.31 3140 3140 MS2 19/44 Linfeng_081211_IgG_10.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 62.80 4.10 1.00 1 2 651.86078 1302.71428 -0.70 49.90 6016 6016 MS2 18/22 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 65.97 4.10 1.00 1 2 639.35687 1277.70647 -2.79 42.36 5006 5006 MS2 18/20 Linfeng_091811_SIN3A_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 51.06 4.10 1.00 1 2 639.35791 1277.70854 -1.16 56.60 6731 6731 MS2 18/20 Linfeng_091611_rIgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.49 4.10 1.00 1 2 590.30151 1179.59575 -4.00 29.01 3155 3155 MS2 17/18 Linfeng_091811_SIN3A_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 49.83 4.10 1.00 1 2 639.35999 1277.71269 2.08 54.43 6527 6527 MS2 17/20 Linfeng_091611_rIgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 48.31 4.10 1.00 1 2 651.86066 1302.71404 -0.89 38.27 9034 9034 MS2 18/22 Linfeng_081211_IgG_8.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 52.76 4.10 1.00 1 2 651.85870 1302.71013 -3.88 38.40 4470 4470 MS2 19/22 Linfeng_091811_SIN3A_1.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 60.13 4.09 1.00 1 2 546.75360 1092.49993 -2.73 2.90 269 269 MS2 20/26 Linfeng_091811_SIN3A_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 56.53 4.09 1.00 1 2 590.30328 1179.59929 -1.00 30.12 6087 6087 MS2 16/18 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.63 4.09 1.00 1 2 590.30219 1179.59709 -2.86 28.82 3216 3216 MS2 17/18 Linfeng_091811_SIN3A_3.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 60.76 4.09 1.00 1 2 651.86011 1302.71294 -1.73 49.95 5395 5395 MS2 18/22 Linfeng_091611_rIgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.98 4.09 1.00 1 2 590.30243 1179.59758 -2.45 36.60 5374 5374 MS2 16/18 Linfeng_081211_IgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 80.27 4.09 1.00 1 2 639.35779 1277.70830 -1.36 50.66 5920 5920 MS2 17/20 Linfeng_091611_rIgG_1.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 60.93 4.09 1.00 1 2 639.35925 1277.71123 0.94 55.49 6056 6056 MS2 16/20 Linfeng_091611_rIgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 60.45 4.08 1.00 1 2 590.30304 1179.59880 -1.41 29.26 5859 5859 MS2 17/18 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 45.63 4.08 1.00 1 2 590.30200 1179.59673 -3.17 29.86 3246 3246 MS2 16/18 Linfeng_091611_rIgG_2.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 61.78 4.08 1.00 1 2 651.85919 1302.71111 -3.14 38.26 4329 4329 MS2 19/22 Linfeng_091611_rIgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 46.51 4.08 1.00 1 2 590.30225 1179.59722 -2.76 28.98 3269 3269 MS2 17/18 Linfeng_091811_SIN3A_4.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 48.58 4.08 1.00 1 2 590.30206 1179.59685 -3.07 28.66 3079 3079 MS2 17/18 Linfeng_091611_rIgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 58.87 4.08 1.00 1 2 651.85944 1302.71160 -2.76 46.21 5557 5557 MS2 18/22 Linfeng_091611_rIgG_4.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 47.53 4.08 1.00 1 2 639.36035 1277.71343 2.66 55.17 6383 6383 MS2 18/20 Linfeng_091611_rIgG_2.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 31.10 4.08 1.00 1 3 447.56113 1340.66883 -0.34 19.95 3109 3109 MS2 23/44 Linfeng_081211_IgG_8.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 33.78 4.08 1.00 1 3 492.59982 1475.78492 -0.27 29.90 5704 5704 MS2 22/44 Linfeng_081211_IgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 45.94 4.08 1.00 1 2 590.30182 1179.59636 -3.48 29.07 3064 3064 MS2 17/18 Linfeng_091811_SIN3A_10.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 59.44 4.07 1.00 1 2 692.34888 1383.69048 0.08 46.02 7990 7990 MS2 17/22 Linfeng_081211_IgG_1.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 66.43 4.07 1.00 1 2 563.27301 1125.53874 -3.14 21.78 2265 2265 MS2 15/18 Linfeng_091811_SIN3A_4.raw High WELLQQVDTSTR IPI:IPI00220327.4 1 1 CID 105.05 4.07 1.00 1 2 738.37720 1475.74712 -1.24 37.48 8463 8463 MS2 18/22 Linfeng_081211_IgG_4.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 59.46 4.07 1.00 1 2 546.75616 1092.50505 1.96 13.52 1257 1257 MS2 18/26 Linfeng_081211_IgG_8.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 64.57 4.07 1.00 1 2 639.35559 1277.70391 -4.79 45.11 5232 5232 MS2 18/20 Linfeng_091611_rIgG_1.raw High THNLEPYFESFINNLR IPI:IPI00220327.4 1 1 CID 70.63 4.07 1.00 1 2 997.48962 1993.97197 -2.38 45.21 5200 5200 MS2 16/30 Linfeng_091611_rIgG_9.raw High YEELQITAGR IPI:IPI00220327.4 2 1 CID 49.98 4.07 1.00 1 2 590.30200 1179.59673 -3.17 28.70 3083 3083 MS2 17/18 Linfeng_091611_rIgG_9.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 52.55 4.06 1.00 1 2 639.35870 1277.71013 0.08 40.31 9658 9658 MS2 14/20 Linfeng_081211_IgG_8.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 58.85 4.06 1.00 1 2 633.32111 1265.63494 -1.84 29.75 6168 6168 MS2 17/20 Linfeng_081211_IgG_8.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 45.34 4.06 1.00 1 2 563.27301 1125.53874 -3.14 21.52 2375 2375 MS2 15/18 Linfeng_091611_rIgG_8.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 58.23 4.06 1.00 1 2 651.86230 1302.71733 1.64 46.77 11435 11435 MS2 18/22 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 48.73 4.05 1.00 1 2 590.30304 1179.59880 -1.41 29.93 6236 6236 MS2 17/18 Linfeng_081211_IgG_8.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 73.98 4.04 1.00 1 2 697.36926 1393.73125 -0.70 30.52 5893 5893 MS2 16/22 Linfeng_081211_IgG_2.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 56.27 4.03 1.00 1 2 692.34967 1383.69206 1.23 38.91 8317 8317 MS2 17/22 Linfeng_081211_IgG_2.raw High QISNLQQSISDAEQR IPI:IPI00220327.4 1 1 CID 98.10 4.03 1.00 1 2 858.93018 1716.85307 1.10 31.37 6536 6536 MS2 17/28 Linfeng_081211_IgG_4.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 68.34 4.02 1.00 1 2 563.27399 1125.54070 -1.41 22.71 3624 3624 MS2 15/18 Linfeng_081211_IgG_5.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 71.08 4.01 1.00 1 2 633.32233 1265.63738 0.09 33.93 5609 5609 MS2 16/20 Linfeng_081211_IgG_9.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 49.45 4.01 1.00 1 2 590.30316 1179.59905 -1.21 30.23 6357 6357 MS2 17/18 Linfeng_081211_IgG_3.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 34.23 4.01 1.00 1 2 639.35919 1277.71111 0.84 41.29 9835 9835 MS2 15/20 Linfeng_081211_IgG_10.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 44.97 4.00 1.00 1 2 590.30365 1179.60002 -0.38 30.55 5902 5902 MS2 17/18 Linfeng_081211_IgG_2.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 54.99 3.99 1.00 1 2 639.36005 1277.71282 2.18 40.23 9494 9494 MS2 14/20 Linfeng_081211_IgG_10.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 49.44 3.99 1.00 1 2 546.75494 1092.50261 -0.27 13.44 1283 1283 MS2 18/26 Linfeng_081211_IgG_9.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 77.59 3.98 1.00 1 2 697.36841 1393.72954 -1.93 26.18 4977 4977 MS2 17/22 Linfeng_081211_IgG_6.raw High LALDLEIATYR IPI:IPI00220327.4 1 1 CID 59.78 3.98 1.00 1 2 639.35870 1277.71013 0.08 41.43 10337 10337 MS2 15/20 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 67.99 3.97 1.00 1 2 738.39655 1475.78581 0.33 28.36 5498 5498 MS2 16/22 Linfeng_081211_IgG_4.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 71.44 3.96 1.00 1 2 697.36731 1393.72734 -3.51 25.68 4819 4819 MS2 17/22 Linfeng_081211_IgG_10.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 34.56 3.96 1.00 1 2 651.86029 1302.71330 -1.45 39.14 9559 9559 MS2 18/22 Linfeng_081211_IgG_3.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 51.51 3.95 1.00 1 2 563.27423 1125.54119 -0.97 25.49 3282 3282 MS2 15/18 Linfeng_081211_IgG_1.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 67.02 3.95 1.00 1 2 633.32117 1265.63506 -1.74 39.52 6059 6059 MS2 18/20 Linfeng_081211_IgG_1.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 60.96 3.95 1.00 1 2 546.75580 1092.50432 1.29 13.78 1340 1340 MS2 20/26 Linfeng_081211_IgG_10.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 58.79 3.94 1.00 1 2 590.30310 1179.59892 -1.31 26.70 4836 4836 MS2 16/18 Linfeng_081211_IgG_5.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 89.72 3.94 1.00 1 2 883.37140 1765.73552 0.40 32.71 6973 6973 MS2 18/38 Linfeng_081211_IgG_4.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 66.84 3.94 1.00 1 2 633.32227 1265.63725 -0.01 32.91 5394 5394 MS2 17/20 Linfeng_081211_IgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 37.09 3.93 1.00 1 2 651.86285 1302.71843 2.49 40.64 7143 7143 MS2 19/22 Linfeng_081211_IgG_9.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 54.20 3.93 1.00 1 2 563.27441 1125.54155 -0.65 23.47 2836 2836 MS2 15/18 Linfeng_081211_IgG_1.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 64.05 3.93 1.00 1 2 563.27509 1125.54289 0.54 24.48 3060 3060 MS2 15/18 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 61.11 3.93 1.00 1 2 651.86115 1302.71501 -0.14 49.26 11142 11142 MS2 18/22 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 45.92 3.92 1.00 1 2 590.30383 1179.60039 -0.07 39.98 9248 9248 MS2 16/18 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 53.01 3.92 1.00 1 2 590.30304 1179.59880 -1.41 29.45 5855 5855 MS2 16/18 Linfeng_081211_IgG_7.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 44.42 3.92 1.00 1 2 692.34967 1383.69206 1.23 41.68 10427 10427 MS2 15/22 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 34.96 3.91 1.00 1 2 590.30347 1179.59966 -0.69 30.26 6194 6194 MS2 15/18 Linfeng_081211_IgG_6.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 57.43 3.90 1.00 1 2 651.86206 1302.71684 1.27 45.98 10677 10677 MS2 15/22 Linfeng_081211_IgG_4.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 60.01 3.90 1.00 1 2 658.76434 1316.52141 -2.44 26.98 5088 5088 MS2 14/18 Linfeng_081211_IgG_4.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 60.68 3.88 1.00 1 2 633.32123 1265.63518 -1.64 31.04 6650 6650 MS2 17/20 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 38.08 3.88 1.00 1 2 590.30341 1179.59953 -0.79 32.59 7228 7228 MS2 16/18 Linfeng_081211_IgG_3.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 44.39 3.88 1.00 1 2 738.39716 1475.78703 1.16 39.99 6212 6212 MS2 15/22 Linfeng_081211_IgG_1.raw High FSScGGGGGSFGAGGGFGSR IPI:IPI00220327.4 1 1 CID C4(Carbamidomethyl) 84.92 3.88 1.00 1 2 883.37128 1765.73528 0.26 32.09 5223 5223 MS2 16/38 Linfeng_081211_IgG_9.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 36.65 3.88 1.00 1 2 651.86292 1302.71855 2.58 46.95 12117 12117 MS2 16/22 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 37.87 3.87 1.00 1 2 590.30322 1179.59917 -1.10 34.38 7505 7505 MS2 15/18 Linfeng_081211_IgG_4.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 62.19 3.87 1.00 1 2 633.32117 1265.63506 -1.74 38.51 5790 5790 MS2 17/20 Linfeng_081211_IgG_1.raw High NmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M2(Oxidation), M5(Oxidation)" 40.58 3.83 1.00 1 2 666.76306 1332.51885 -0.52 21.76 3662 3662 MS2 14/18 Linfeng_081211_IgG_6.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 49.49 3.82 1.00 1 2 633.32111 1265.63494 -1.84 30.16 6164 6164 MS2 16/20 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 43.80 3.81 1.00 1 2 738.39691 1475.78655 0.83 30.72 6302 6302 MS2 13/22 Linfeng_081211_IgG_4.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 53.02 3.81 1.00 1 2 692.34796 1383.68865 -1.24 42.28 9827 9827 MS2 14/22 Linfeng_081211_IgG_5.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 38.75 3.80 1.00 1 2 651.86060 1302.71391 -0.98 38.48 8951 8951 MS2 17/22 Linfeng_081211_IgG_6.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 33.80 3.80 1.00 1 2 590.30273 1179.59819 -1.93 29.11 5756 5756 MS2 15/18 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 40.64 3.79 1.00 1 2 651.86200 1302.71672 1.18 51.44 9362 9362 MS2 18/22 Linfeng_081211_IgG_1.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 47.05 3.78 1.00 1 2 738.39484 1475.78240 -1.98 28.25 5512 5512 MS2 14/22 Linfeng_081211_IgG_6.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 44.63 3.78 1.00 1 2 692.34900 1383.69072 0.26 36.72 8197 8197 MS2 15/22 Linfeng_081211_IgG_4.raw High NmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M2(Oxidation), M5(Oxidation)" 62.66 3.77 1.00 1 2 666.76239 1332.51750 -1.53 24.72 3113 3113 MS2 15/18 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 40.25 3.76 1.00 1 2 590.30322 1179.59917 -1.10 31.63 6483 6483 MS2 16/18 Linfeng_081211_IgG_5.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 41.98 3.75 1.00 1 2 590.30310 1179.59892 -1.31 28.91 5870 5870 MS2 15/18 Linfeng_081211_IgG_8.raw High SGGGFSSGSAGIINYQR IPI:IPI00220327.4 1 1 CID 32.59 3.74 1.00 1 2 829.40167 1657.79607 1.89 33.16 7445 7445 MS2 16/32 Linfeng_081211_IgG_3.raw High NmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M2(Oxidation), M5(Oxidation)" 68.88 3.72 1.00 1 2 666.76294 1332.51860 -0.70 23.71 2904 2904 MS2 15/18 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 48.52 3.72 1.00 1 2 651.86157 1302.71587 0.52 38.38 8759 8759 MS2 16/22 Linfeng_081211_IgG_4.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 52.02 3.72 1.00 1 2 563.27405 1125.54082 -1.30 22.12 3801 3801 MS2 15/18 Linfeng_081211_IgG_8.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 44.59 3.71 1.00 1 2 658.76434 1316.52141 -2.44 26.85 5102 5102 MS2 15/18 Linfeng_081211_IgG_6.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 35.15 3.71 1.00 1 2 738.39502 1475.78276 -1.73 29.28 5994 5994 MS2 15/22 Linfeng_081211_IgG_3.raw High NmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M2(Oxidation), M5(Oxidation)" 60.00 3.71 1.00 1 2 666.76294 1332.51860 -0.70 25.90 3362 3362 MS2 15/18 Linfeng_081211_IgG_1.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 59.20 3.71 1.00 1 2 563.27386 1125.54045 -1.62 23.36 4093 4093 MS2 15/18 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 40.17 3.70 1.00 1 2 590.30432 1179.60137 0.76 33.33 7436 7436 MS2 13/18 Linfeng_081211_IgG_8.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 43.15 3.70 1.00 1 2 692.34985 1383.69243 1.50 47.21 8336 8336 MS2 15/22 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 32.93 3.70 1.00 1 2 590.30383 1179.60039 -0.07 32.10 4543 4543 MS2 14/18 Linfeng_081211_IgG_1.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 60.78 3.70 1.00 1 2 633.32129 1265.63530 -1.55 30.26 6039 6039 MS2 17/20 Linfeng_081211_IgG_5.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 83.31 3.68 1.00 1 2 658.76605 1316.52483 0.15 31.51 4409 4409 MS2 15/18 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 38.94 3.68 1.00 1 2 590.30414 1179.60100 0.45 32.35 6839 6839 MS2 16/18 Linfeng_081211_IgG_4.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 55.44 3.67 1.00 1 2 563.27405 1125.54082 -1.30 22.73 3757 3757 MS2 15/18 Linfeng_081211_IgG_7.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 51.40 3.66 1.00 1 2 590.30359 1179.59990 -0.48 31.55 6203 6203 MS2 16/18 Linfeng_081211_IgG_2.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 74.60 3.66 1.00 1 2 658.76532 1316.52336 -0.96 30.50 4211 4211 MS2 14/18 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 39.33 3.66 1.00 1 2 590.30518 1179.60307 2.21 44.38 10362 10362 MS2 14/18 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 46.03 3.65 1.00 1 2 651.86127 1302.71526 0.05 38.51 8987 8987 MS2 18/22 Linfeng_081211_IgG_7.raw High FLEQQNQVLQTK IPI:IPI00021304.1;IPI:IPI00220327.4;IPI:IPI00376379.4 3 3 CID 30.99 3.65 1.00 1 2 738.39575 1475.78423 -0.74 33.32 6729 6729 MS2 13/22 Linfeng_081211_IgG_2.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 71.69 3.64 1.00 1 2 658.76520 1316.52312 -1.14 27.16 4963 4963 MS2 15/18 Linfeng_081211_IgG_5.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 58.73 3.64 1.00 1 2 697.36981 1393.73235 0.08 25.85 4771 4771 MS2 12/22 Linfeng_081211_IgG_4.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 64.40 3.64 1.00 1 2 590.30341 1179.59953 -0.79 33.30 6724 6724 MS2 16/18 Linfeng_081211_IgG_2.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 66.28 3.62 1.00 1 2 658.76508 1316.52287 -1.33 26.60 5165 5165 MS2 15/18 Linfeng_081211_IgG_8.raw High SLVNLGGSKSISISVAR IPI:IPI00220327.4 1 1 CID 65.05 3.62 1.00 1 2 844.48926 1687.97124 0.62 33.70 7284 7284 MS2 14/32 Linfeng_081211_IgG_4.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 56.78 3.61 1.00 1 2 692.34778 1383.68828 -1.50 39.55 9689 9689 MS2 14/22 Linfeng_081211_IgG_3.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 44.92 3.61 1.00 1 2 633.32214 1265.63701 -0.20 34.87 8096 8096 MS2 13/20 Linfeng_081211_IgG_3.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 73.07 3.60 1.00 1 2 633.32220 1265.63713 -0.10 32.06 6348 6348 MS2 17/20 Linfeng_081211_IgG_2.raw High TNAENEFVTIK IPI:IPI00220327.4 1 1 CID 56.81 3.59 1.00 1 2 633.32251 1265.63774 0.38 30.23 6123 6123 MS2 16/20 Linfeng_081211_IgG_7.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 58.26 3.59 1.00 1 2 651.86237 1302.71745 1.74 45.05 11084 11084 MS2 14/22 Linfeng_081211_IgG_7.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 58.13 3.58 1.00 1 2 563.27393 1125.54057 -1.52 22.43 3821 3821 MS2 15/18 Linfeng_081211_IgG_10.raw High GSGGGSSGGSIGGR IPI:IPI00220327.4 1 1 CID 47.30 3.58 1.00 1 2 546.75616 1092.50505 1.96 14.40 1305 1305 MS2 16/26 Linfeng_081211_IgG_3.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 30.79 3.58 1.00 1 2 590.30420 1179.60112 0.55 50.75 11295 11295 MS2 14/18 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 29.24 3.58 1.00 1 2 651.86102 1302.71477 -0.32 44.97 7669 7669 MS2 18/22 Linfeng_081211_IgG_1.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 47.54 3.58 1.00 1 2 590.30481 1179.60234 1.59 45.48 10591 10591 MS2 16/18 Linfeng_081211_IgG_4.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 51.83 3.58 1.00 1 2 563.27338 1125.53948 -2.49 22.23 3791 3791 MS2 15/18 Linfeng_081211_IgG_6.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 54.49 3.57 1.00 1 2 651.86255 1302.71782 2.02 53.58 9736 9736 MS2 17/22 Linfeng_081211_IgG_1.raw High AEAESLYQSK IPI:IPI00220327.4 1 1 CID 59.32 3.57 1.00 1 2 563.27429 1125.54131 -0.87 23.62 3858 3858 MS2 15/18 Linfeng_081211_IgG_2.raw High NMQDmVEDYR IPI:IPI00220327.4 1 1 CID M5(Oxidation) 81.46 3.57 1.00 1 2 658.76361 1316.51995 -3.56 28.11 5238 5238 MS2 15/18 Linfeng_081211_IgG_2.raw High AQYEDIAQK IPI:IPI00220327.4 1 1 CID 53.91 3.57 1.00 1 2 533.26331 1065.51933 -1.70 22.41 3662 3662 MS2 13/16 Linfeng_081211_IgG_7.raw High SKAEAESLYQSK IPI:IPI00220327.4 1 1 CID 45.78 3.55 1.00 1 2 670.83887 1340.67046 0.88 40.39 6321 6321 MS2 17/22 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 43.72 3.54 1.00 1 2 651.86243 1302.71758 1.83 45.72 11147 11147 MS2 15/22 Linfeng_081211_IgG_6.raw High AQYEDIAQK IPI:IPI00220327.4 1 1 CID 36.09 3.53 1.00 1 2 533.26471 1065.52214 0.93 24.19 2997 2997 MS2 13/16 Linfeng_081211_IgG_1.raw High SLNNQFASFIDK IPI:IPI00220327.4 1 1 CID 54.11 3.53 1.00 1 2 692.34784 1383.68840 -1.42 35.23 7780 7780 MS2 16/22 Linfeng_081211_IgG_4.raw High NMQDMVEDYR IPI:IPI00220327.4 1 1 CID 50.08 3.52 1.00 1 2 650.76758 1300.52788 -1.41 32.24 6855 6855 MS2 13/18 Linfeng_081211_IgG_6.raw High LNDLEDALQQAK IPI:IPI00220327.4 1 1 CID 25.16 3.51 1.00 1 2 679.35217 1357.69707 0.90 42.89 7047 7047 MS2 14/22 Linfeng_081211_IgG_1.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 35.73 3.51 1.00 1 2 651.86127 1302.71526 0.05 46.79 11025 11025 MS2 17/22 Linfeng_081211_IgG_5.raw High NmQDmVEDYR IPI:IPI00220327.4 1 1 CID "M2(Oxidation), M5(Oxidation)" 47.25 3.50 1.00 1 2 666.76385 1332.52043 0.67 22.86 3921 3921 MS2 14/18 Linfeng_081211_IgG_3.raw High AQYEDIAQK IPI:IPI00220327.4 1 1 CID 45.48 3.50 1.00 1 2 533.26422 1065.52117 0.01 22.97 3963 3963 MS2 13/16 Linfeng_081211_IgG_3.raw High DYQELMNTK IPI:IPI00220327.4 1 1 CID 39.84 3.49 1.00 1 2 571.26245 1141.51763 -1.59 29.49 5891 5891 MS2 13/16 Linfeng_081211_IgG_4.raw High SLDLDSIIAEVK IPI:IPI00220327.4 1 1 CID 51.82 3.49 1.00 1 2 651.86108 1302.71489 -0.23 45.82 9855 9855 MS2 16/22 Linfeng_081211_IgG_2.raw High YEELQITAGR IPI:IPI00220327.4;IPI:IPI00293665.9 2 2 CID 34.49 3.49 1.00 1 2 590.30322 1179.59917 -1.10 29.34 5699 5699 MS2 14/18 Linfeng_081211_IgG_5.raw High DYQELMNTK IPI:IPI00220327.4 1 1 CID 31.98 3.49 1.00 1 2 571.26251 1141.51775 -1.48 30.26 6370 6370 MS2 13/16 Linfeng_081211_IgG_3.raw High TNAENEFVTIKK IPI:IPI00220327.4 1 1 CID 51.85 3.47 1.00 1 2 697.36920 1393.73113 -0.79 25.96 4805 4805 MS2 16/22 Linfeng_081211_IgG_7.raw