Accession Description ?Coverage ?# Proteins ?# Unique Peptides ?# Peptides ?# PSMs Score A2 Coverage A2 # Peptides A2 # PSM A2 Score B2 Coverage B2 # Peptides B2 # PSM B2 # AAs MW [kDa] calc. pI P01834 Ig kappa chain C region OS=Homo sapiens GN=IGKC PE=1 SV=1 - [IGKC_HUMAN] 80.19 1 5 5 20 32.43 66.98 4 8 48.91 80.19 5 12 106 11.6 5.87 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 126 5.14 0.00 0 0 50 2 1068.49609 2135.98491 7.54 34.85 3068 3068 MS2 22/38 Linfeng_20130408_Smad2_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 111 4.90 0.00 0 0 50 2 1068.49304 2135.97881 4.68 35.20 3262 3262 MS2 25/38 Linfeng_20130405_rIgG9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 119 4.80 0.00 0 0 50 2 1068.49524 2135.98320 6.74 34.91 2909 2909 MS2 19/38 Linfeng_20130408_Smad2_9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 103 4.76 0.00 0 0 21 2 1068.49268 2135.97807 4.34 35.14 3348 3348 MS2 21/38 Linfeng_20130405_rIgG8.raw High VYAcEVTHQGLSSPVTK Unambiguous 1 1 P01834 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 4.47 0.00 0 11 50 2 938.47351 1875.93974 6.80 36.61 3621 3621 MS2 22/32 Linfeng_20130408_Smad2_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 128 4.29 0.00 0 0 48 3 712.66425 2135.97818 4.39 35.20 3261 3261 MS2 28/76 Linfeng_20130405_rIgG9.raw High VYAcEVTHQGLSSPVTK Unambiguous 1 1 P01834 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 4.28 0.00 0 0 50 2 938.47040 1875.93352 3.48 36.88 3930 3930 MS2 19/32 Linfeng_20130405_rIgG8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 181 4.28 0.00 0 3 12 2 973.52216 1946.03703 5.13 42.00 5276 5276 MS2 17/34 Linfeng_20130408_Smad2_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 182 4.27 0.00 0 6 5 2 973.52252 1946.03777 5.51 42.01 5413 5413 MS2 20/34 Linfeng_20130408_Smad2_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 140 4.14 0.00 0 0 50 3 712.66632 2135.98441 7.30 34.83 3059 3059 MS2 27/76 Linfeng_20130408_Smad2_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 127 4.07 0.00 0 1 14 3 712.66431 2135.97837 4.47 35.18 3361 3361 MS2 29/76 Linfeng_20130405_rIgG8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 143 3.93 0.00 0 3 50 3 712.66614 2135.98386 7.05 34.88 2899 2899 MS2 28/76 Linfeng_20130408_Smad2_9.raw High SGTASVVcLLNNFYPR Unambiguous 1 1 P01834 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 252 3.89 0.00 0 4 36 2 899.45496 1797.90264 4.08 42.43 5578 5578 MS2 21/30 Linfeng_20130408_Smad2_8.raw High DSTYSLSSTLTLSK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 258 3.72 0.00 0 12 7 2 751.88641 1502.76555 4.70 41.06 5043 5043 MS2 16/26 Linfeng_20130408_Smad2_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 201 3.59 0.00 0 6 14 3 649.35046 1946.03684 5.03 42.01 5279 5279 MS2 28/68 Linfeng_20130408_Smad2_9.raw High SGTASVVcLLNNFYPR Unambiguous 1 1 P01834 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 268 3.53 0.00 0 5 15 3 599.97247 1797.90287 4.21 42.45 5586 5586 MS2 23/60 Linfeng_20130408_Smad2_8.raw High SGTASVVcLLNNFYPR Unambiguous 1 1 P01834 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.50 0.00 0 20 17 2 899.45673 1797.90618 6.05 42.67 5912 5912 MS2 19/30 Linfeng_20130405_rIgG9.raw High SGTASVVcLLNNFYPR Unambiguous 1 1 P01834 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 254 3.43 0.00 0 7 12 2 899.45325 1797.89922 2.18 42.58 6075 6075 MS2 19/30 Linfeng_20130405_rIgG8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 182 3.21 0.00 0 5 1 2 973.52014 1946.03301 3.06 42.21 5915 5915 MS2 16/34 Linfeng_20130405_rIgG8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 1 1 P01834 CID 1.0000 0.0000 1 1 208 3.17 0.00 0 6 4 3 649.35059 1946.03720 5.22 42.02 5414 5414 MS2 27/68 Linfeng_20130408_Smad2_8.raw P35908 "Keratin, type II cytoskeletal 2 epidermal OS=Homo sapiens GN=KRT2 PE=1 SV=2 - [K22E_HUMAN]" 78.87 6 31 40 405 767.42 71.67 32 192 787.29 62.91 34 213 639 65.4 8.00 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 191 6.14 0.00 0 0 15 2 1237.60522 2474.20317 4.21 39.95 4626 4626 MS2 25/48 Linfeng_20130405_rIgG3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 186 6.02 0.00 0 0 34 2 1237.60486 2474.20244 3.91 40.06 4896 4896 MS2 26/48 Linfeng_20130405_rIgG4.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 37 6.01 0.00 0 0 33 2 1200.01648 2399.02568 2.96 41.30 4967 4967 MS2 30/58 Linfeng_20130408_Smad2_4.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 46 5.96 0.00 0 5 14 3 800.34778 2399.02878 4.25 41.38 4902 4902 MS2 47/116 Linfeng_20130408_Smad2_3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 189 5.94 0.00 0 0 18 2 1237.60461 2474.20195 3.72 39.93 4502 4502 MS2 27/48 Linfeng_20130405_rIgG1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 177 5.84 0.00 0 3 50 2 1237.60852 2474.20976 6.87 39.93 4230 4230 MS2 27/48 Linfeng_20130408_Smad2_2.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 38 5.81 0.00 0 0 50 2 1200.01843 2399.02959 4.59 41.33 4748 4748 MS2 31/58 Linfeng_20130408_Smad2_6.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 164 5.80 0.00 0 0 50 2 1237.61011 2474.21294 8.16 39.88 4406 4406 MS2 27/48 Linfeng_20130408_Smad2_3.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 70 5.77 0.00 1 1 49 3 834.36627 2501.08426 6.77 34.45 2873 2873 MS2 43/112 Linfeng_20130405_rIgG3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 179 5.76 0.00 0 0 50 2 1237.60669 2474.20610 5.39 39.91 4484 4484 MS2 24/48 Linfeng_20130408_Smad2_1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 251 5.74 0.00 0 4 5 3 825.40613 2474.20383 4.48 39.94 4648 4648 MS2 38/96 Linfeng_20130405_rIgG2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 186 5.74 0.00 0 2 33 2 1237.60461 2474.20195 3.72 39.92 4644 4644 MS2 28/48 Linfeng_20130405_rIgG2.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 68 5.73 0.00 1 1 22 3 834.36530 2501.08133 5.60 34.49 3025 3025 MS2 40/112 Linfeng_20130405_rIgG9.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 46 5.68 0.00 0 24 4 3 800.34802 2399.02951 4.56 41.44 5189 5189 MS2 53/116 Linfeng_20130405_rIgG2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 240 5.56 0.00 0 0 11 3 825.40570 2474.20255 3.96 39.91 4494 4494 MS2 38/96 Linfeng_20130405_rIgG1.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 222 5.53 0.00 1 25 6 3 538.62378 1613.85678 4.57 41.15 5054 5054 MS2 30/52 Linfeng_20130405_rIgG3.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 38 5.52 0.00 0 0 43 2 1200.01953 2399.03179 5.50 41.28 5006 5006 MS2 30/58 Linfeng_20130408_Smad2_9.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 249 5.51 0.00 0 8 28 3 825.40631 2474.20438 4.70 39.91 4617 4617 MS2 38/96 Linfeng_20130405_rIgG3.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 210 5.50 0.00 0 2 12 2 1229.60889 2458.21050 5.15 40.47 4822 4822 MS2 21/48 Linfeng_20130405_rIgG2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 246 5.41 0.00 0 1 50 3 825.40747 2474.20786 6.10 39.90 4481 4481 MS2 39/96 Linfeng_20130408_Smad2_1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 218 5.38 0.00 0 1 7 3 1022.17120 3064.49906 3.19 41.54 4963 4963 MS2 39/104 Linfeng_20130408_Smad2_3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 248 5.33 0.00 0 6 10 3 825.40594 2474.20328 4.25 39.99 4872 4872 MS2 40/96 Linfeng_20130405_rIgG4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 240 5.33 0.00 0 0 50 3 825.40570 2474.20255 3.96 39.82 4187 4187 MS2 38/96 Linfeng_20130408_Smad2_7.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 222 5.32 0.00 0 1 12 3 1022.17291 3064.50418 4.86 41.57 4769 4769 MS2 38/104 Linfeng_20130408_Smad2_2.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 70 5.31 0.00 1 1 21 3 834.36597 2501.08335 6.41 34.43 2936 2936 MS2 39/112 Linfeng_20130405_rIgG2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 61 5.30 0.00 0 0 50 2 871.38116 1741.75505 3.73 33.32 2781 2781 MS2 23/44 Linfeng_20130405_rIgG8.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 36 5.28 0.00 0 0 34 2 1200.01782 2399.02837 4.08 41.35 4891 4891 MS2 31/58 Linfeng_20130408_Smad2_3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 71 5.28 0.00 0 0 50 2 871.38336 1741.75945 6.26 33.32 2525 2525 MS2 23/44 Linfeng_20130405_rIgG1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 218 5.24 0.00 0 11 22 2 919.96606 1838.92485 5.62 41.27 4942 4942 MS2 27/42 Linfeng_20130408_Smad2_1.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 36 5.19 0.00 0 3 10 2 1200.01782 2399.02837 4.08 41.46 5171 5171 MS2 29/58 Linfeng_20130405_rIgG6.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 103 5.19 0.00 0 0 50 2 1072.48083 2143.95439 4.43 38.66 4417 4417 MS2 26/34 Linfeng_20130405_rIgG4.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 221 5.14 0.00 1 37 12 3 538.62372 1613.85660 4.46 41.16 4936 4936 MS2 31/52 Linfeng_20130405_rIgG1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 221 5.14 0.00 0 0 8 3 1022.17218 3064.50199 4.14 41.50 5041 5041 MS2 40/104 Linfeng_20130408_Smad2_4.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 215 5.14 0.00 0 1 7 3 1022.17371 3064.50656 5.64 41.56 5058 5058 MS2 41/104 Linfeng_20130408_Smad2_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 65 5.11 0.00 0 0 33 2 871.38055 1741.75383 3.03 33.38 2706 2706 MS2 24/44 Linfeng_20130405_rIgG9.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 244 5.11 0.00 0 1 50 3 825.40845 2474.21079 7.29 39.92 4228 4228 MS2 37/96 Linfeng_20130408_Smad2_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 220 5.09 0.00 1 13 7 3 538.62384 1613.85697 4.69 41.19 5309 5309 MS2 30/52 Linfeng_20130405_rIgG4.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 222 5.09 0.00 1 8 13 3 538.62378 1613.85678 4.57 41.00 4974 4974 MS2 29/52 Linfeng_20130408_Smad2_5.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 116 5.07 0.00 0 0 50 2 1072.48389 2143.96050 7.28 38.59 4046 4046 MS2 24/34 Linfeng_20130408_Smad2_1.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 36 5.03 0.00 0 6 4 2 1200.01807 2399.02886 4.28 41.44 5190 5190 MS2 29/58 Linfeng_20130405_rIgG2.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 35 5.03 0.00 0 11 8 2 1200.01733 2399.02739 3.67 41.44 5046 5046 MS2 30/58 Linfeng_20130405_rIgG1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 217 4.99 0.00 0 5 2 3 1022.17249 3064.50290 4.44 41.61 5116 5116 MS2 37/104 Linfeng_20130405_rIgG1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 243 4.97 0.00 0 0 50 3 825.40778 2474.20877 6.47 39.61 4009 4009 MS2 37/96 Linfeng_20130408_Smad2_10.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 121 4.92 0.00 0 0 50 2 1072.48535 2143.96343 8.64 38.54 3850 3850 MS2 23/34 Linfeng_20130408_Smad2_6.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 131 4.90 0.00 0 1 50 2 1072.48669 2143.96611 9.90 38.44 4037 4037 MS2 22/34 Linfeng_20130408_Smad2_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 208 4.88 0.00 0 12 50 2 919.96851 1838.92974 8.28 41.27 4660 4660 MS2 28/42 Linfeng_20130408_Smad2_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 224 4.88 0.00 1 22 39 3 538.62604 1613.86356 8.77 41.04 4875 4875 MS2 29/52 Linfeng_20130408_Smad2_4.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 120 4.86 0.00 0 0 50 2 1072.48621 2143.96514 9.44 38.47 4126 4126 MS2 23/34 Linfeng_20130408_Smad2_5.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 38 4.82 0.00 0 8 12 2 1200.01758 2399.02788 3.88 41.47 5424 5424 MS2 28/58 Linfeng_20130405_rIgG4.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 37 4.76 0.00 0 3 12 2 1200.01624 2399.02519 2.76 41.36 4978 4978 MS2 30/58 Linfeng_20130408_Smad2_1.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 207 4.76 0.00 0 0 35 2 1229.60986 2458.21245 5.94 40.49 4691 4691 MS2 20/48 Linfeng_20130405_rIgG1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 238 4.75 0.00 0 3 50 3 825.40802 2474.20951 6.77 39.81 4386 4386 MS2 35/96 Linfeng_20130408_Smad2_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 227 4.72 0.00 1 15 21 3 538.62299 1613.85440 3.10 41.09 4877 4877 MS2 30/52 Linfeng_20130408_Smad2_1.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 68 4.71 0.00 1 0 50 3 834.36542 2501.08170 5.75 34.53 2849 2849 MS2 36/112 Linfeng_20130405_rIgG1.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 225 4.69 0.00 1 32 6 3 538.62421 1613.85807 5.37 41.12 5467 5467 MS2 28/52 Linfeng_20130405_rIgG8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 78 4.67 0.00 0 0 50 2 871.38483 1741.76238 7.94 33.39 2454 2454 MS2 25/44 Linfeng_20130405_rIgG10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 195 4.64 0.00 0 7 35 2 919.96649 1838.92571 6.09 41.20 4930 4930 MS2 27/42 Linfeng_20130408_Smad2_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 82 4.63 0.00 0 4 50 2 871.38531 1741.76335 8.50 33.30 2514 2514 MS2 26/44 Linfeng_20130405_rIgG7.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 222 4.63 0.00 1 12 2 3 538.62360 1613.85624 4.23 41.15 5072 5072 MS2 31/52 Linfeng_20130405_rIgG2.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 114 4.61 0.00 0 0 50 2 1072.48535 2143.96343 8.64 38.51 3774 3774 MS2 20/34 Linfeng_20130408_Smad2_7.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 120 4.58 0.00 0 6 1 4 1023.77942 4092.09585 5.62 42.26 5526 5526 MS2 47/258 Linfeng_20130405_rIgG2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 193 4.58 0.00 0 0 50 2 1237.61157 2474.21587 9.34 39.87 4268 4268 MS2 22/48 Linfeng_20130408_Smad2_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 24 4.57 0.00 0 0 50 2 870.86285 1740.71843 7.35 32.78 2402 2402 MS2 26/38 Linfeng_20130405_rIgG7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 211 4.57 0.00 0 5 5 2 919.96442 1838.92156 3.83 41.29 4987 4987 MS2 28/42 Linfeng_20130405_rIgG1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 205 4.57 0.00 0 9 3 2 919.96375 1838.92021 3.10 41.31 5118 5118 MS2 30/42 Linfeng_20130405_rIgG3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 227 4.57 0.00 0 16 3 3 613.64594 1838.92325 4.75 41.29 5129 5129 MS2 45/84 Linfeng_20130405_rIgG2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 206 4.56 0.00 0 12 9 2 919.96368 1838.92009 3.03 41.33 5367 5367 MS2 29/42 Linfeng_20130405_rIgG4.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 19 4.55 0.00 0 2 50 2 870.86169 1740.71611 6.02 32.79 2650 2650 MS2 26/38 Linfeng_20130405_rIgG8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 70 4.52 0.00 0 0 50 2 871.38293 1741.75859 5.76 32.89 2651 2651 MS2 18/44 Linfeng_20130405_rIgG4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 M1(Oxidation) CID 1.0000 0.0000 1 1 192 4.51 0.00 0 0 50 2 1237.60376 2474.20024 3.03 39.98 4548 4548 MS2 22/48 Linfeng_20130405_rIgG7.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 246 4.50 0.00 0 3 17 2 686.36230 1371.71733 4.25 40.93 4745 4745 MS2 19/22 Linfeng_20130408_Smad2_3.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 252 4.50 0.00 0 3 1 3 1016.84235 3048.51249 5.94 41.94 5395 5395 MS2 36/104 Linfeng_20130405_rIgG2.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 222 4.48 0.00 1 24 6 3 538.62372 1613.85660 4.46 41.18 4974 4974 MS2 30/52 Linfeng_20130405_rIgG7.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 81 4.42 0.00 0 0 50 2 871.38538 1741.76348 8.57 33.26 2532 2532 MS2 17/44 Linfeng_20130405_rIgG3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 247 4.41 0.00 0 4 50 2 738.40082 1475.79436 6.12 37.95 3953 3953 MS2 20/22 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 259 4.41 0.00 0 2 33 2 738.40228 1475.79729 8.11 37.82 3840 3840 MS2 20/22 Linfeng_20130408_Smad2_9.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 130 4.41 0.00 0 13 50 3 715.32501 2143.96048 7.27 38.58 3984 3984 MS2 30/68 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 243 4.40 0.00 0 1 13 2 738.39978 1475.79228 4.72 38.18 3947 3947 MS2 20/22 Linfeng_20130405_rIgG7.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 252 4.39 0.00 0 18 50 2 686.36090 1371.71453 2.20 40.68 4360 4360 MS2 19/22 Linfeng_20130408_Smad2_10.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 192 4.39 0.00 0 0 8 2 730.90717 1460.80705 5.11 42.31 5338 5338 MS2 19/22 Linfeng_20130408_Smad2_4.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.39 0.00 0 31 50 2 738.40118 1475.79509 6.62 38.14 3658 3658 MS2 20/22 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 255 4.37 0.00 0 0 37 2 738.39929 1475.79131 4.06 38.18 4018 4018 MS2 19/22 Linfeng_20130405_rIgG3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 253 4.37 0.00 0 2 37 2 738.40173 1475.79619 7.36 38.05 3810 3810 MS2 20/22 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.36 0.00 0 2 27 2 738.39929 1475.79131 4.06 38.24 3824 3824 MS2 20/22 Linfeng_20130405_rIgG10.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 252 4.36 0.00 0 21 3 2 665.36847 1329.72966 2.69 42.53 5104 5104 MS2 20/22 Linfeng_20130408_Smad2_2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 193 4.35 0.00 0 3 4 2 730.90643 1460.80559 4.11 42.31 5033 5033 MS2 19/22 Linfeng_20130408_Smad2_7.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 197 4.35 0.00 0 1 8 2 730.90656 1460.80583 4.27 42.32 5483 5483 MS2 19/22 Linfeng_20130408_Smad2_5.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 194 4.34 0.00 0 2 9 2 730.90692 1460.80657 4.77 42.20 4912 4912 MS2 19/22 Linfeng_20130408_Smad2_10.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 189 4.34 0.00 0 3 2 2 730.90625 1460.80522 3.86 42.42 5065 5065 MS2 19/22 Linfeng_20130408_Smad2_2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 4.34 0.00 0 3 2 2 730.90753 1460.80779 5.61 42.44 6016 6016 MS2 19/22 Linfeng_20130405_rIgG8.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 194 4.34 0.00 0 6 6 2 730.90662 1460.80596 4.36 42.41 5571 5571 MS2 18/22 Linfeng_20130405_rIgG3.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 245 4.34 0.00 0 0 30 2 686.36023 1371.71318 1.23 40.96 4831 4831 MS2 19/22 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.32 0.00 0 10 1 2 665.36890 1329.73052 3.33 42.40 5568 5568 MS2 20/22 Linfeng_20130408_Smad2_8.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 65 4.32 0.00 1 0 50 3 834.36652 2501.08500 7.07 34.45 2820 2820 MS2 36/112 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 236 4.32 0.00 0 9 1 2 665.36951 1329.73174 4.25 42.45 5533 5533 MS2 20/22 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 213 4.31 0.00 0 18 3 2 665.37012 1329.73296 5.16 42.54 6058 6058 MS2 20/22 Linfeng_20130405_rIgG8.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 31 4.31 0.00 0 0 50 2 870.86475 1740.72222 9.53 32.60 2424 2424 MS2 25/38 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.31 0.00 0 12 1 2 665.36761 1329.72795 1.40 42.49 5312 5312 MS2 20/22 Linfeng_20130408_Smad2_3.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 121 4.31 0.00 0 4 50 2 1072.48499 2143.96269 8.30 38.59 3802 3802 MS2 21/34 Linfeng_20130408_Smad2_2.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 227 4.30 0.00 0 8 7 2 686.36133 1371.71538 2.83 41.06 5260 5260 MS2 19/22 Linfeng_20130405_rIgG4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 212 4.29 0.00 0 4 43 2 919.96637 1838.92546 5.96 41.24 4853 4853 MS2 27/42 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 255 4.29 0.00 0 9 50 2 738.39960 1475.79192 4.47 38.18 4014 4014 MS2 20/22 Linfeng_20130405_rIgG6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 4.29 0.00 0 16 3 2 665.36896 1329.73064 3.42 42.40 5418 5418 MS2 20/22 Linfeng_20130408_Smad2_9.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 4.28 0.00 0 3 4 2 730.90710 1460.80693 5.03 42.47 5829 5829 MS2 20/22 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.27 0.00 0 25 1 2 665.36945 1329.73161 4.15 42.58 5882 5882 MS2 19/22 Linfeng_20130405_rIgG4.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 193 4.27 0.00 0 3 4 2 730.90619 1460.80510 3.77 42.31 5108 5108 MS2 18/22 Linfeng_20130408_Smad2_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 185 4.27 0.00 0 41 50 2 627.80872 1254.61016 2.22 35.61 3105 3105 MS2 21/26 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 4.26 0.00 0 5 9 2 738.39960 1475.79192 4.47 38.20 4227 4227 MS2 20/22 Linfeng_20130405_rIgG9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 228 4.26 0.00 0 10 3 3 613.64459 1838.91922 2.56 41.32 5120 5120 MS2 40/84 Linfeng_20130405_rIgG3.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 240 4.26 0.00 0 4 14 2 686.36212 1371.71697 3.98 40.93 4543 4543 MS2 19/22 Linfeng_20130408_Smad2_7.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 194 4.26 0.00 0 4 1 2 730.90723 1460.80718 5.19 42.44 5600 5600 MS2 19/22 Linfeng_20130405_rIgG2.raw High GGGGGGFRGFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 215 4.25 0.00 1 20 18 3 633.97552 1899.91202 3.31 37.82 3964 3964 MS2 32/84 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 212 4.25 0.00 0 25 3 2 665.37030 1329.73332 5.44 42.56 5867 5867 MS2 19/22 Linfeng_20130405_rIgG9.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 244 4.24 0.00 0 9 4 2 686.36249 1371.71770 4.52 41.03 5027 5027 MS2 19/22 Linfeng_20130405_rIgG2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 266 4.24 0.00 0 18 50 2 730.89990 1460.79253 -4.84 42.30 5334 5334 MS2 18/22 Linfeng_20130408_Smad2_4.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 251 4.23 0.00 0 4 3 2 686.36273 1371.71819 4.87 41.02 5008 5008 MS2 19/22 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.23 0.00 0 17 0 2 665.36865 1329.73003 2.96 42.56 5653 5653 MS2 20/22 Linfeng_20130405_rIgG2.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 117 4.23 0.00 0 0 50 2 1072.48499 2143.96269 8.30 38.51 3965 3965 MS2 21/34 Linfeng_20130408_Smad2_3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 15 1 2 665.36871 1329.73015 3.05 42.45 5159 5159 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 213 4.22 0.00 0 21 16 2 919.96405 1838.92082 3.43 41.20 5043 5043 MS2 23/42 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 18 4 2 665.36884 1329.73039 3.24 42.34 4964 4964 MS2 19/22 Linfeng_20130408_Smad2_10.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 187 4.22 0.00 0 4 4 2 730.90991 1460.81255 8.87 42.46 5576 5576 MS2 18/22 Linfeng_20130405_rIgG6.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 249 4.22 0.00 0 9 50 2 686.36273 1371.71819 4.87 40.98 4563 4563 MS2 19/22 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 246 4.22 0.00 0 0 7 2 738.39941 1475.79155 4.22 38.17 4314 4314 MS2 20/22 Linfeng_20130405_rIgG5.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 247 4.21 0.00 0 11 40 2 686.36230 1371.71733 4.25 40.91 4599 4599 MS2 20/22 Linfeng_20130408_Smad2_6.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 4.21 0.00 0 10 17 2 738.40125 1475.79521 6.70 37.82 3961 3961 MS2 20/22 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 267 4.21 0.00 0 1 12 2 738.40027 1475.79326 5.38 38.19 4256 4256 MS2 20/22 Linfeng_20130405_rIgG4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.19 0.00 0 27 4 2 665.36908 1329.73088 3.60 42.42 5072 5072 MS2 19/22 Linfeng_20130408_Smad2_7.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 227 4.18 0.00 1 45 50 3 538.62299 1613.85440 3.10 41.05 4788 4788 MS2 28/52 Linfeng_20130408_Smad2_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 175 4.18 0.00 0 29 50 2 627.80841 1254.60954 1.73 35.54 2931 2931 MS2 21/26 Linfeng_20130408_Smad2_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 196 4.17 0.00 0 5 4 2 919.96478 1838.92229 4.23 41.30 5539 5539 MS2 29/42 Linfeng_20130405_rIgG8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 12 2 2 665.37012 1329.73296 5.16 42.53 6004 6004 MS2 20/22 Linfeng_20130405_rIgG5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 14 2 2 665.37012 1329.73296 5.16 42.59 5628 5628 MS2 19/22 Linfeng_20130405_rIgG6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 19 4.16 0.00 0 31 50 2 870.86169 1740.71611 6.02 32.71 2439 2439 MS2 25/38 Linfeng_20130408_Smad2_5.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 4.15 0.00 0 7 2 2 730.90753 1460.80779 5.61 42.44 5965 5965 MS2 19/22 Linfeng_20130405_rIgG5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 239 4.14 0.00 0 4 50 2 738.40125 1475.79521 6.70 37.67 3397 3397 MS2 20/22 Linfeng_20130408_Smad2_10.raw High QSGSRGGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 97 4.14 0.00 1 10 50 3 753.00848 2257.01090 7.58 32.56 2477 2477 MS2 27/108 Linfeng_20130405_rIgG9.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 244 4.14 0.00 0 11 46 2 686.36108 1371.71489 2.47 40.79 4947 4947 MS2 19/22 Linfeng_20130408_Smad2_8.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 4.13 0.00 0 2 25 2 686.36462 1371.72197 7.63 40.90 4831 4831 MS2 19/22 Linfeng_20130408_Smad2_4.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 243 4.13 0.00 0 2 6 2 686.36200 1371.71672 3.81 41.04 4893 4893 MS2 19/22 Linfeng_20130405_rIgG1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 186 4.13 0.00 0 25 39 2 627.80908 1254.61089 2.80 35.71 3258 3258 MS2 22/26 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 232 4.13 0.00 0 33 1 2 665.36914 1329.73100 3.69 42.52 5619 5619 MS2 19/22 Linfeng_20130405_rIgG3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 189 4.12 0.00 0 37 50 2 627.80975 1254.61223 3.87 35.55 2967 2967 MS2 22/26 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 240 4.12 0.00 0 37 4 2 665.36969 1329.73210 4.52 42.42 5377 5377 MS2 19/22 Linfeng_20130408_Smad2_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 250 4.12 0.00 0 0 4 3 1016.84052 3048.50699 4.14 41.94 5252 5252 MS2 35/104 Linfeng_20130405_rIgG1.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 197 4.11 0.00 0 10 3 2 730.90649 1460.80571 4.19 42.30 5528 5528 MS2 18/22 Linfeng_20130408_Smad2_8.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 189 4.11 0.00 0 10 50 2 730.90674 1460.80620 4.52 42.28 5376 5376 MS2 19/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.10 0.00 0 3 46 2 738.40125 1475.79521 6.70 38.11 3886 3886 MS2 20/22 Linfeng_20130408_Smad2_1.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 27 4.10 0.00 0 0 50 2 870.86322 1740.71916 7.77 32.87 2560 2560 MS2 25/38 Linfeng_20130405_rIgG9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 182 4.07 0.00 0 11 50 2 627.80872 1254.61016 2.22 35.22 2744 2744 MS2 20/26 Linfeng_20130408_Smad2_10.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 235 4.06 0.00 0 6 7 2 686.36157 1371.71587 3.18 40.89 4933 4933 MS2 19/22 Linfeng_20130408_Smad2_5.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 187 4.06 0.00 0 0 10 2 730.90613 1460.80498 3.69 42.47 5355 5355 MS2 18/22 Linfeng_20130405_rIgG10.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 185 4.04 0.00 0 7 29 2 627.80902 1254.61077 2.71 35.74 3190 3190 MS2 21/26 Linfeng_20130405_rIgG1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 89 4.04 0.00 0 19 50 2 871.38635 1741.76543 9.69 33.17 2554 2554 MS2 18/44 Linfeng_20130408_Smad2_5.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 184 4.04 0.00 0 7 50 2 627.80927 1254.61125 3.09 35.39 3058 3058 MS2 20/26 Linfeng_20130408_Smad2_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 218 4.03 0.00 0 15 14 2 919.96283 1838.91838 2.11 41.33 5030 5030 MS2 24/42 Linfeng_20130405_rIgG7.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 193 4.03 0.00 0 3 2 2 730.90704 1460.80681 4.94 42.42 5476 5476 MS2 18/22 Linfeng_20130405_rIgG7.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 207 4.03 0.00 0 4 18 2 730.90570 1460.80412 3.10 42.35 5264 5264 MS2 19/22 Linfeng_20130408_Smad2_3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 237 4.03 0.00 0 26 1 2 665.36890 1329.73052 3.33 42.56 5529 5529 MS2 19/22 Linfeng_20130405_rIgG7.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 242 4.03 0.00 0 2 8 2 686.36200 1371.71672 3.81 41.05 4923 4923 MS2 19/22 Linfeng_20130405_rIgG7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 173 4.02 0.00 0 55 50 2 627.80841 1254.60954 1.73 35.67 3170 3170 MS2 20/26 Linfeng_20130408_Smad2_1.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 250 4.02 0.00 0 17 9 2 686.36212 1371.71697 3.98 41.06 5025 5025 MS2 20/22 Linfeng_20130405_rIgG6.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 272 3.99 0.00 0 29 50 2 738.39746 1475.78765 1.57 37.90 3650 3650 MS2 19/22 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 244 3.99 0.00 0 34 1 2 665.36993 1329.73259 4.89 42.57 5509 5509 MS2 19/22 Linfeng_20130405_rIgG1.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 207 3.99 0.00 1 31 13 2 807.43164 1613.85600 4.09 41.16 5077 5077 MS2 22/26 Linfeng_20130405_rIgG2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 76 3.99 0.00 0 0 50 2 871.38464 1741.76201 7.73 33.31 2489 2489 MS2 16/44 Linfeng_20130408_Smad2_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 190 3.99 0.00 0 39 50 2 627.80920 1254.61113 3.00 35.69 3193 3193 MS2 20/26 Linfeng_20130405_rIgG7.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 81 3.99 0.00 0 1 50 2 794.85254 1588.69780 9.03 31.04 2205 2205 MS2 25/38 Linfeng_20130405_rIgG2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 3.98 0.00 0 5 32 2 738.39929 1475.79131 4.06 38.21 3917 3917 MS2 20/22 Linfeng_20130405_rIgG1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 210 3.98 0.00 0 12 4 2 919.96381 1838.92034 3.17 41.29 5495 5495 MS2 27/42 Linfeng_20130405_rIgG5.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 250 3.97 0.00 1 26 24 3 513.27490 1537.81015 3.77 38.44 4144 4144 MS2 22/44 Linfeng_20130405_rIgG2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 190 3.97 0.00 0 36 50 2 627.80975 1254.61223 3.87 35.49 3138 3138 MS2 21/26 Linfeng_20130408_Smad2_4.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 246 3.97 0.00 0 2 23 2 738.39941 1475.79155 4.22 38.14 4327 4327 MS2 20/22 Linfeng_20130405_rIgG8.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 209 3.96 0.00 0 8 5 3 487.60666 1460.80542 3.99 42.44 5584 5584 MS2 25/44 Linfeng_20130405_rIgG3.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 234 3.96 0.00 1 19 50 3 538.62488 1613.86008 6.62 41.08 4599 4599 MS2 31/52 Linfeng_20130408_Smad2_2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.95 0.00 0 40 3 2 665.36841 1329.72954 2.59 42.48 5417 5417 MS2 19/22 Linfeng_20130408_Smad2_1.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 30 3.93 0.00 0 34 50 2 870.86420 1740.72112 8.90 32.75 2414 2414 MS2 22/38 Linfeng_20130405_rIgG3.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 244 3.92 0.00 0 11 21 2 686.36255 1371.71782 4.61 41.08 5282 5282 MS2 19/22 Linfeng_20130405_rIgG9.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 130 3.92 0.00 0 19 50 3 715.32562 2143.96231 8.12 38.49 4053 4053 MS2 33/68 Linfeng_20130408_Smad2_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 184 3.91 0.00 0 4 23 2 627.80914 1254.61101 2.90 35.77 3437 3437 MS2 22/26 Linfeng_20130405_rIgG9.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 29 3.91 0.00 0 0 50 2 870.86322 1740.71916 7.77 32.87 2331 2331 MS2 24/38 Linfeng_20130405_rIgG10.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 26 3.91 0.00 0 4 50 2 870.86359 1740.71990 8.19 32.77 2413 2413 MS2 21/38 Linfeng_20130405_rIgG1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 183 3.90 0.00 0 29 14 2 627.80902 1254.61077 2.71 35.69 3518 3518 MS2 23/26 Linfeng_20130405_rIgG8.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 170 3.89 0.00 0 5 18 2 632.35431 1263.70134 5.51 41.35 4591 4591 MS2 18/20 Linfeng_20130408_Smad2_10.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 3.89 0.00 0 31 50 2 738.40302 1475.79875 9.10 40.49 4465 4465 MS2 18/22 Linfeng_20130408_Smad2_6.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 242 3.88 0.00 1 17 28 3 507.94388 1521.81708 5.02 40.64 4747 4747 MS2 26/44 Linfeng_20130405_rIgG1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 74 3.87 0.00 0 29 32 2 660.79749 1320.58769 3.62 35.73 3186 3186 MS2 26/30 Linfeng_20130408_Smad2_1.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 229 3.87 0.00 0 4 50 2 686.36163 1371.71599 3.27 40.76 4825 4825 MS2 20/22 Linfeng_20130408_Smad2_9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 186 3.87 0.00 0 57 50 2 627.80933 1254.61138 3.19 35.70 2967 2967 MS2 21/26 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 250 3.86 0.00 0 43 16 2 738.39990 1475.79253 4.88 40.72 4913 4913 MS2 18/22 Linfeng_20130405_rIgG2.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 3.85 0.00 0 19 4 3 820.07446 2458.20884 4.47 40.46 4820 4820 MS2 24/96 Linfeng_20130405_rIgG2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 193 3.84 0.00 0 13 4 2 919.96558 1838.92388 5.09 41.28 5126 5126 MS2 29/42 Linfeng_20130405_rIgG2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 3.84 0.00 0 3 2 2 730.90692 1460.80657 4.77 42.46 5829 5829 MS2 18/22 Linfeng_20130405_rIgG4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 179 3.82 0.00 0 13 47 2 627.80841 1254.60954 1.73 35.76 3106 3106 MS2 20/26 Linfeng_20130405_rIgG10.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 237 3.82 0.00 1 0 47 3 507.94302 1521.81452 3.34 40.64 5116 5116 MS2 22/44 Linfeng_20130405_rIgG9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 188 3.82 0.00 0 39 50 2 627.80872 1254.61016 2.22 35.49 3215 3215 MS2 20/26 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 252 3.80 0.00 0 18 50 2 738.39880 1475.79033 3.39 38.17 4051 4051 MS2 20/22 Linfeng_20130405_rIgG2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.79 0.00 0 6 50 2 738.39850 1475.78972 2.98 37.90 3863 3863 MS2 17/22 Linfeng_20130408_Smad2_4.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 197 3.77 0.00 0 5 23 2 730.90594 1460.80461 3.44 42.37 5376 5376 MS2 17/22 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 3.77 0.00 0 20 5 2 665.36890 1329.73052 3.33 42.60 5408 5408 MS2 19/22 Linfeng_20130405_rIgG10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 197 3.76 0.00 0 19 20 2 632.35242 1263.69756 2.51 41.55 4965 4965 MS2 18/20 Linfeng_20130408_Smad2_3.raw High AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 69 3.76 0.00 1 5 50 3 834.36786 2501.08902 8.68 34.33 2618 2618 MS2 31/112 Linfeng_20130408_Smad2_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 185 3.75 0.00 0 21 50 2 627.80927 1254.61125 3.09 35.36 3214 3214 MS2 20/26 Linfeng_20130408_Smad2_8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 82 3.75 0.00 0 0 50 2 871.38574 1741.76421 8.99 33.07 2552 2552 MS2 21/44 Linfeng_20130408_Smad2_8.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 27 3.74 0.00 0 7 50 2 870.86371 1740.72014 8.34 32.73 2492 2492 MS2 26/38 Linfeng_20130405_rIgG2.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 131 3.74 0.00 1 3 50 3 630.96198 1890.87137 7.20 33.07 2620 2620 MS2 27/88 Linfeng_20130405_rIgG9.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 208 3.73 0.00 0 7 3 3 487.60669 1460.80552 4.06 42.47 5616 5616 MS2 24/44 Linfeng_20130405_rIgG2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 216 3.72 0.00 0 8 50 2 919.96991 1838.93254 9.81 41.05 4481 4481 MS2 18/42 Linfeng_20130408_Smad2_10.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 185 3.72 0.00 0 14 32 2 627.80872 1254.61016 2.22 35.70 3320 3320 MS2 21/26 Linfeng_20130405_rIgG2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 204 3.71 0.00 0 6 4 2 632.35388 1263.70049 4.83 41.63 5251 5251 MS2 18/20 Linfeng_20130405_rIgG3.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 228 3.71 0.00 1 42 33 3 507.94315 1521.81488 3.58 40.62 4765 4765 MS2 25/44 Linfeng_20130405_rIgG7.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 162 3.70 0.00 1 1 16 3 758.02130 2272.04935 4.17 37.28 3678 3678 MS2 25/72 Linfeng_20130405_rIgG1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.69 0.00 0 11 12 2 632.35291 1263.69853 3.29 41.51 4811 4811 MS2 18/20 Linfeng_20130408_Smad2_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 80 3.69 0.00 0 15 50 2 871.38507 1741.76286 8.22 33.29 2568 2568 MS2 18/44 Linfeng_20130405_rIgG6.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 261 3.69 0.00 0 23 14 3 457.91052 1371.71701 4.02 41.04 5013 5013 MS2 30/44 Linfeng_20130405_rIgG3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 60 3.68 0.00 0 0 34 2 871.37866 1741.75005 0.86 33.28 2837 2837 MS2 17/44 Linfeng_20130405_rIgG5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 216 3.68 0.00 0 18 15 2 919.96472 1838.92217 4.16 41.41 5405 5405 MS2 21/42 Linfeng_20130405_rIgG9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 251 3.66 0.00 0 42 22 2 738.39990 1475.79253 4.88 40.75 4811 4811 MS2 18/22 Linfeng_20130405_rIgG7.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 3.66 0.00 0 4 3 3 1016.84131 3048.50937 4.92 41.94 5376 5376 MS2 31/104 Linfeng_20130405_rIgG3.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 21 3.66 0.00 0 0 50 2 870.86224 1740.71721 6.65 32.72 2706 2706 MS2 26/38 Linfeng_20130405_rIgG5.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 168 3.65 0.00 0 5 15 2 665.32648 1329.64568 4.72 38.48 4011 4011 MS2 19/22 Linfeng_20130405_rIgG1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.65 0.00 0 18 34 2 632.35278 1263.69829 3.09 41.59 4776 4776 MS2 18/20 Linfeng_20130408_Smad2_2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 3.65 0.00 0 6 19 2 730.90857 1460.80986 7.03 42.46 5467 5467 MS2 17/22 Linfeng_20130405_rIgG1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 83 3.64 0.00 0 14 36 3 440.86761 1320.58829 4.07 35.85 3218 3218 MS2 30/60 Linfeng_20130405_rIgG1.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 175 3.63 0.00 0 34 50 2 665.32971 1329.65215 9.59 38.19 4080 4080 MS2 19/22 Linfeng_20130408_Smad2_8.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 187 3.62 0.00 0 16 27 2 627.80920 1254.61113 3.00 35.69 3461 3461 MS2 22/26 Linfeng_20130405_rIgG4.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 155 3.62 0.00 0 8 16 2 665.32593 1329.64458 3.89 38.52 4348 4348 MS2 19/22 Linfeng_20130405_rIgG9.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 46 3.62 0.00 0 19 28 3 800.34772 2399.02860 4.18 41.35 5097 5097 MS2 35/116 Linfeng_20130408_Smad2_5.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 261 3.61 0.00 1 7 50 2 696.34863 1391.68999 7.05 33.61 2699 2699 MS2 17/22 Linfeng_20130405_rIgG2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 84 3.60 0.00 0 21 50 2 660.80054 1320.59380 8.24 35.57 3159 3159 MS2 25/30 Linfeng_20130408_Smad2_4.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 211 3.59 0.00 0 17 38 2 632.35272 1263.69817 3.00 41.49 5035 5035 MS2 18/20 Linfeng_20130408_Smad2_4.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 173 3.58 0.00 0 5 50 2 665.32806 1329.64885 7.11 38.45 3755 3755 MS2 19/22 Linfeng_20130408_Smad2_2.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 157 3.57 0.00 0 12 50 2 665.32715 1329.64702 5.73 38.36 3912 3912 MS2 19/22 Linfeng_20130408_Smad2_3.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 248 3.57 0.00 0 8 3 2 597.31458 1193.62187 4.82 38.88 4489 4489 MS2 17/18 Linfeng_20130405_rIgG4.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 29 3.57 0.00 0 38 50 2 870.86432 1740.72136 9.04 31.98 2459 2459 MS2 22/38 Linfeng_20130405_rIgG4.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 172 3.57 0.00 0 13 50 2 665.32813 1329.64897 7.20 38.30 4071 4071 MS2 19/22 Linfeng_20130408_Smad2_5.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 242 3.56 0.00 1 7 39 2 668.86218 1336.71709 4.73 37.26 3923 3923 MS2 18/22 Linfeng_20130405_rIgG9.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 164 3.56 0.00 0 7 7 2 665.32642 1329.64556 4.63 38.48 4157 4157 MS2 19/22 Linfeng_20130405_rIgG2.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 288 3.56 0.00 1 15 50 3 464.56805 1391.68961 6.77 33.53 2389 2389 MS2 25/44 Linfeng_20130408_Smad2_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 75 3.55 0.00 0 29 12 3 440.86649 1320.58490 1.51 35.59 3486 3486 MS2 30/60 Linfeng_20130405_rIgG8.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 162 3.55 0.00 0 19 41 2 665.32648 1329.64568 4.72 38.50 4362 4362 MS2 19/22 Linfeng_20130405_rIgG4.raw High GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 39 3.54 0.00 0 4 47 2 1200.01758 2399.02788 3.88 41.37 4692 4692 MS2 26/58 Linfeng_20130408_Smad2_7.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 166 3.54 0.00 0 9 16 2 665.32660 1329.64592 4.90 38.50 4055 4055 MS2 19/22 Linfeng_20130405_rIgG7.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 220 3.54 0.00 0 15 36 2 632.35333 1263.69939 3.96 41.53 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_7.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 174 3.53 0.00 0 15 39 2 665.32648 1329.64568 4.72 38.52 4132 4132 MS2 19/22 Linfeng_20130405_rIgG6.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.53 0.00 1 30 22 3 507.94345 1521.81580 4.18 40.54 4846 4846 MS2 22/44 Linfeng_20130405_rIgG2.raw High GGGGGGFRGFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 202 3.52 0.00 1 10 25 3 633.97528 1899.91129 2.93 37.87 3941 3941 MS2 27/84 Linfeng_20130405_rIgG3.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 165 3.52 0.00 0 4 32 2 665.32635 1329.64543 4.54 38.46 4116 4116 MS2 19/22 Linfeng_20130405_rIgG3.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 21 50 2 665.32843 1329.64958 7.66 38.20 3965 3965 MS2 19/22 Linfeng_20130408_Smad2_9.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 3 2 2 632.35370 1263.70012 4.54 41.63 5266 5266 MS2 18/20 Linfeng_20130405_rIgG2.raw High LNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 244 3.51 0.00 0 24 10 2 686.36243 1371.71758 4.43 41.00 5419 5419 MS2 19/22 Linfeng_20130405_rIgG8.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 283 3.49 0.00 1 8 32 3 464.56845 1391.69080 7.63 33.57 2611 2611 MS2 25/44 Linfeng_20130405_rIgG3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 71 3.48 0.00 0 23 50 2 660.79980 1320.59233 7.13 35.55 3230 3230 MS2 25/30 Linfeng_20130408_Smad2_5.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 99 3.48 0.00 0 20 50 3 440.86838 1320.59058 5.81 35.44 3075 3075 MS2 29/60 Linfeng_20130408_Smad2_9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 191 3.47 0.00 0 31 50 2 627.80939 1254.61150 3.29 35.61 3525 3525 MS2 19/26 Linfeng_20130405_rIgG5.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 190 3.46 0.00 1 8 50 3 758.02393 2272.05722 7.64 37.33 3469 3469 MS2 23/72 Linfeng_20130408_Smad2_2.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 257 3.46 0.00 0 7 4 2 597.31433 1193.62139 4.41 38.80 4268 4268 MS2 17/18 Linfeng_20130405_rIgG2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 69 3.46 0.00 0 49 20 3 440.86600 1320.58344 0.40 35.60 3157 3157 MS2 32/60 Linfeng_20130408_Smad2_1.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 177 3.45 0.00 0 13 50 2 665.32831 1329.64934 7.47 38.35 3792 3792 MS2 19/22 Linfeng_20130408_Smad2_6.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.45 0.00 1 17 24 3 507.94330 1521.81534 3.88 40.61 4856 4856 MS2 22/44 Linfeng_20130405_rIgG3.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 P35908 M23(Oxidation) CID 1.0000 0.0000 1 1 220 3.45 0.00 0 3 3 3 1022.17169 3064.50052 3.67 41.65 5499 5499 MS2 21/104 Linfeng_20130405_rIgG4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 147 3.45 0.00 0 2 50 2 599.28357 1197.55986 8.63 4.39 411 411 MS2 21/28 Linfeng_20130405_rIgG4.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 281 3.44 0.00 0 5 25 2 597.31561 1193.62395 6.56 38.73 4092 4092 MS2 17/18 Linfeng_20130408_Smad2_1.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 85 3.43 0.00 0 7 50 2 794.85303 1588.69878 9.64 30.54 2130 2130 MS2 18/38 Linfeng_20130405_rIgG6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 61 3.43 0.00 0 23 45 2 660.79730 1320.58733 3.34 35.84 3128 3128 MS2 24/30 Linfeng_20130405_rIgG10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 68 3.43 0.00 0 0 50 2 871.38306 1741.75884 5.91 33.03 2560 2560 MS2 18/44 Linfeng_20130405_rIgG2.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 247 3.42 0.00 1 47 50 3 513.27570 1537.81253 5.32 38.33 3902 3902 MS2 17/44 Linfeng_20130408_Smad2_3.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 217 3.41 0.00 0 26 50 3 487.60648 1460.80487 3.62 42.30 5383 5383 MS2 21/44 Linfeng_20130408_Smad2_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 81 3.41 0.00 0 36 43 3 440.86798 1320.58939 4.91 35.77 3277 3277 MS2 29/60 Linfeng_20130405_rIgG3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.41 0.00 0 40 50 2 738.39850 1475.78972 2.98 37.90 3586 3586 MS2 16/22 Linfeng_20130408_Smad2_7.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 26 3.40 0.00 0 0 50 2 870.86444 1740.72161 9.18 32.47 2102 2102 MS2 19/38 Linfeng_20130408_Smad2_10.raw High GGGGGGFRGFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 201 3.40 0.00 1 0 32 3 633.97498 1899.91037 2.44 37.93 3852 3852 MS2 24/84 Linfeng_20130405_rIgG1.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 269 3.40 0.00 0 6 21 2 597.31604 1193.62480 7.27 38.60 4088 4088 MS2 17/18 Linfeng_20130408_Smad2_4.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 150 3.39 0.00 0 14 13 2 665.32587 1329.64446 3.80 38.46 4433 4433 MS2 19/22 Linfeng_20130405_rIgG5.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 3.38 0.00 1 11 17 3 464.56741 1391.68769 5.39 33.70 2615 2615 MS2 26/44 Linfeng_20130405_rIgG1.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 131 3.38 0.00 1 6 50 3 630.96216 1890.87192 7.49 33.00 2552 2552 MS2 32/88 Linfeng_20130405_rIgG2.raw High VDLLNQEIEFLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 209 3.37 0.00 0 8 10 3 487.60672 1460.80561 4.12 42.46 5491 5491 MS2 24/44 Linfeng_20130405_rIgG7.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 189 3.36 0.00 1 4 50 3 758.02435 2272.05851 8.20 37.13 3456 3456 MS2 21/72 Linfeng_20130408_Smad2_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 92 3.35 0.00 0 0 50 2 871.38635 1741.76543 9.69 33.35 2348 2348 MS2 19/44 Linfeng_20130408_Smad2_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 70 3.34 0.00 0 40 50 2 660.79761 1320.58794 3.81 35.81 3451 3451 MS2 25/30 Linfeng_20130405_rIgG9.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 283 3.34 0.00 1 16 50 3 464.56894 1391.69226 8.68 33.32 2490 2490 MS2 28/44 Linfeng_20130408_Smad2_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 196 3.34 0.00 0 39 50 2 627.80939 1254.61150 3.29 35.71 3249 3249 MS2 19/26 Linfeng_20130405_rIgG6.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 261 3.33 0.00 0 11 35 3 492.60300 1475.79444 6.18 38.11 3830 3830 MS2 26/44 Linfeng_20130408_Smad2_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 70 3.31 0.00 0 18 50 2 660.79895 1320.59062 5.84 35.83 3296 3296 MS2 26/30 Linfeng_20130405_rIgG3.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 236 3.31 0.00 1 4 41 2 668.86206 1336.71684 4.54 37.26 3669 3669 MS2 17/22 Linfeng_20130405_rIgG1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 183 3.31 0.00 1 3 5 3 752.68976 2256.05472 4.33 40.77 4911 4911 MS2 24/72 Linfeng_20130405_rIgG3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 283 3.30 0.00 0 33 12 3 492.60138 1475.78958 2.89 38.21 4332 4332 MS2 27/44 Linfeng_20130405_rIgG5.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 235 3.28 0.00 1 30 50 2 668.86407 1336.72087 7.56 36.98 3664 3664 MS2 18/22 Linfeng_20130408_Smad2_5.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 250 3.27 0.00 1 0 50 2 696.34918 1391.69109 7.84 33.61 2591 2591 MS2 16/22 Linfeng_20130405_rIgG7.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 243 3.27 0.00 1 16 50 2 668.86224 1336.71721 4.82 37.24 3967 3967 MS2 15/22 Linfeng_20130405_rIgG4.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 283 3.27 0.00 0 27 50 2 597.31537 1193.62346 6.15 38.45 4047 4047 MS2 17/18 Linfeng_20130408_Smad2_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 79 3.26 0.00 0 16 50 2 660.80023 1320.59319 7.78 35.80 2992 2992 MS2 26/30 Linfeng_20130408_Smad2_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 183 3.26 0.00 1 13 16 3 752.68982 2256.05490 4.41 40.79 4797 4797 MS2 24/72 Linfeng_20130405_rIgG1.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 3.26 0.00 1 21 50 3 378.52829 1133.57032 7.34 33.89 2644 2644 MS2 20/32 Linfeng_20130408_Smad2_1.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 75 3.26 0.00 0 0 50 2 794.85168 1588.69609 7.95 30.54 2041 2041 MS2 20/38 Linfeng_20130405_rIgG7.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 90 3.26 0.00 0 17 50 3 440.86819 1320.59003 5.39 35.26 2753 2753 MS2 31/60 Linfeng_20130408_Smad2_10.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 250 3.25 0.00 0 8 3 2 597.31464 1193.62200 4.92 38.84 4171 4171 MS2 17/18 Linfeng_20130405_rIgG7.raw High NKLNDLEEALQQAK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 206 3.25 0.00 1 27 37 2 807.43250 1613.85771 5.15 41.01 4977 4977 MS2 19/26 Linfeng_20130408_Smad2_5.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 131 3.24 0.00 1 22 50 3 630.96210 1890.87174 7.40 33.02 2477 2477 MS2 30/88 Linfeng_20130405_rIgG3.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 256 3.24 0.00 1 0 50 2 696.34955 1391.69182 8.36 33.40 2780 2780 MS2 16/22 Linfeng_20130405_rIgG4.raw High PINLEPIFQGYIDSLKR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 118 3.23 0.00 1 6 22 3 668.37408 2003.10770 5.78 42.75 5710 5710 MS2 22/64 Linfeng_20130405_rIgG3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 100 3.23 0.00 0 26 50 2 660.80090 1320.59453 8.80 35.70 3129 3129 MS2 25/30 Linfeng_20130408_Smad2_3.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 184 3.23 0.00 1 4 15 3 752.68958 2256.05417 4.09 40.77 4818 4818 MS2 25/72 Linfeng_20130405_rIgG7.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 P35908 M10(Oxidation) CID 1.0000 0.0000 1 1 161 3.22 0.00 1 0 44 3 758.02142 2272.04972 4.34 37.24 3690 3690 MS2 25/72 Linfeng_20130405_rIgG7.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 3.22 0.00 1 8 15 3 464.56750 1391.68796 5.59 33.63 2767 2767 MS2 25/44 Linfeng_20130405_rIgG9.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 171 3.22 0.00 0 27 50 2 665.32928 1329.65129 8.94 38.29 3988 3988 MS2 19/22 Linfeng_20130408_Smad2_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 80 3.22 0.00 0 17 50 3 440.86716 1320.58692 3.03 35.74 3208 3208 MS2 30/60 Linfeng_20130405_rIgG7.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 27 3.21 0.00 0 8 50 2 870.86414 1740.72099 8.83 32.78 2458 2458 MS2 24/38 Linfeng_20130405_rIgG6.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 134 3.21 0.00 1 17 50 3 630.96246 1890.87284 7.98 33.07 2518 2518 MS2 29/88 Linfeng_20130405_rIgG6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 84 3.20 0.00 0 36 50 3 440.86783 1320.58893 4.56 35.49 3137 3137 MS2 29/60 Linfeng_20130408_Smad2_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 155 3.20 0.00 0 11 49 2 599.28235 1197.55742 6.60 32.84 2323 2323 MS2 21/28 Linfeng_20130405_rIgG10.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 262 3.20 0.00 1 43 32 3 513.27454 1537.80906 3.06 38.50 4133 4133 MS2 18/44 Linfeng_20130405_rIgG3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 77 3.20 0.00 0 38 20 2 660.79742 1320.58757 3.53 35.72 3528 3528 MS2 21/30 Linfeng_20130405_rIgG8.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 270 3.19 0.00 1 19 50 3 464.56863 1391.69135 8.02 33.45 2508 2508 MS2 23/44 Linfeng_20130408_Smad2_3.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 260 3.19 0.00 1 13 26 3 464.56671 1391.68558 3.88 33.39 2861 2861 MS2 26/44 Linfeng_20130405_rIgG5.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 259 3.19 0.00 0 12 6 2 597.31439 1193.62151 4.51 38.80 4234 4234 MS2 17/18 Linfeng_20130405_rIgG3.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 260 3.18 0.00 0 16 2 2 597.31390 1193.62053 3.69 38.84 4576 4576 MS2 17/18 Linfeng_20130405_rIgG5.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 75 3.18 0.00 0 27 21 3 440.86676 1320.58573 2.13 35.49 3212 3212 MS2 30/60 Linfeng_20130408_Smad2_5.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 254 3.17 0.00 0 20 9 2 597.31329 1193.61931 2.67 38.81 4450 4450 MS2 17/18 Linfeng_20130405_rIgG9.raw High GGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 150 3.17 0.00 0 14 50 2 599.28278 1197.55828 7.31 32.84 2362 2362 MS2 22/28 Linfeng_20130408_Smad2_1.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 266 3.17 0.00 1 8 50 3 464.56885 1391.69199 8.48 33.17 2578 2578 MS2 26/44 Linfeng_20130408_Smad2_8.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 286 3.17 0.00 1 29 50 3 464.56793 1391.68924 6.51 33.41 2514 2514 MS2 23/44 Linfeng_20130408_Smad2_1.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 307 3.16 0.00 0 3 3 2 487.27109 973.53490 3.66 38.42 4101 4101 MS2 13/14 Linfeng_20130405_rIgG3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 85 3.16 0.00 0 31 5 3 440.86740 1320.58765 3.59 35.65 3535 3535 MS2 33/60 Linfeng_20130405_rIgG5.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 104 3.15 0.00 0 11 50 2 660.80090 1320.59453 8.80 35.63 2991 2991 MS2 25/30 Linfeng_20130408_Smad2_6.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 219 3.14 0.00 0 7 12 2 519.26923 1037.53118 4.76 38.42 4154 4154 MS2 14/16 Linfeng_20130408_Smad2_8.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 202 3.14 0.00 0 6 13 2 519.27039 1037.53349 6.99 38.72 3844 3844 MS2 14/16 Linfeng_20130408_Smad2_2.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 257 3.14 0.00 1 23 39 3 513.27478 1537.80979 3.53 38.51 4059 4059 MS2 22/44 Linfeng_20130405_rIgG7.raw High NVQDAIADAEQR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 149 3.14 0.00 0 35 50 2 665.32593 1329.64458 3.89 38.57 3939 3939 MS2 20/22 Linfeng_20130405_rIgG10.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 231 3.13 0.00 0 11 18 2 519.26990 1037.53252 6.05 38.78 4221 4221 MS2 14/16 Linfeng_20130405_rIgG6.raw High DYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 161 3.13 0.00 0 41 5 2 570.27631 1139.54534 4.52 40.07 4550 4550 MS2 13/16 Linfeng_20130405_rIgG1.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 76 3.13 0.00 0 3 50 2 794.85236 1588.69744 8.80 30.66 2254 2254 MS2 18/38 Linfeng_20130405_rIgG8.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 207 3.12 0.00 0 11 10 2 519.26898 1037.53069 4.29 38.75 4251 4251 MS2 15/16 Linfeng_20130405_rIgG2.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 281 3.11 0.00 0 8 50 2 597.31586 1193.62444 6.97 38.67 4014 4014 MS2 17/18 Linfeng_20130408_Smad2_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 76 3.11 0.00 0 18 50 2 660.79858 1320.58989 5.29 35.77 3487 3487 MS2 20/30 Linfeng_20130405_rIgG4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 63 3.10 0.00 0 37 50 2 660.79822 1320.58916 4.73 35.80 3348 3348 MS2 23/30 Linfeng_20130405_rIgG2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.09 0.00 0 25 50 2 554.27972 1107.55217 8.32 35.15 2860 2860 MS2 15/16 Linfeng_20130408_Smad2_6.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 227 3.09 0.00 0 43 50 2 519.27100 1037.53472 8.17 38.26 3588 3588 MS2 14/16 Linfeng_20130408_Smad2_10.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 197 3.07 0.00 0 7 14 2 519.27081 1037.53435 7.81 38.62 3810 3810 MS2 15/16 Linfeng_20130408_Smad2_7.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.05 0.00 0 11 50 2 554.27979 1107.55229 8.44 35.11 3020 3020 MS2 15/16 Linfeng_20130408_Smad2_4.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 204 3.04 0.00 0 18 23 2 519.26880 1037.53032 3.93 38.78 4113 4113 MS2 14/16 Linfeng_20130405_rIgG1.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 303 3.04 0.00 0 5 9 2 487.27176 973.53624 5.04 37.92 3479 3479 MS2 13/14 Linfeng_20130408_Smad2_10.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 212 3.03 0.00 1 0 50 2 696.34601 1391.68474 3.28 33.34 2600 2600 MS2 18/22 Linfeng_20130408_Smad2_5.raw High DYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 185 3.02 0.00 0 42 8 2 570.27582 1139.54436 3.67 40.04 4656 4656 MS2 14/16 Linfeng_20130405_rIgG3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 78 3.00 0.00 0 39 50 2 660.80048 1320.59368 8.15 35.62 2952 2952 MS2 22/30 Linfeng_20130408_Smad2_7.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 318 3.00 0.00 0 10 28 2 487.27127 973.53526 4.04 38.16 4025 4025 MS2 13/14 Linfeng_20130408_Smad2_5.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 211 3.00 0.00 0 27 50 2 554.27936 1107.55144 7.66 35.31 2870 2870 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 184 2.99 0.00 0 16 20 2 632.35297 1263.69866 3.38 41.61 5077 5077 MS2 17/20 Linfeng_20130408_Smad2_1.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 284 2.97 0.00 0 17 50 2 597.31598 1193.62468 7.17 38.72 3845 3845 MS2 17/18 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 198 2.97 0.00 0 11 26 2 554.27838 1107.54949 5.90 34.98 3107 3107 MS2 14/16 Linfeng_20130408_Smad2_8.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 254 2.96 0.00 0 15 50 2 597.31488 1193.62248 5.33 38.60 3870 3870 MS2 17/18 Linfeng_20130408_Smad2_6.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 202 2.94 0.00 0 7 50 2 554.27856 1107.54985 6.23 35.01 2939 2939 MS2 15/16 Linfeng_20130408_Smad2_9.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 324 2.92 0.00 0 10 32 2 487.27179 973.53630 5.11 38.21 3745 3745 MS2 13/14 Linfeng_20130408_Smad2_6.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 230 2.92 0.00 0 22 50 2 519.27008 1037.53288 6.40 38.40 4029 4029 MS2 14/16 Linfeng_20130408_Smad2_9.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 216 2.92 0.00 1 16 50 2 668.86517 1336.72307 9.20 37.02 3421 3421 MS2 14/22 Linfeng_20130408_Smad2_6.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 255 2.91 0.00 1 10 50 2 696.34943 1391.69158 8.19 33.37 2381 2381 MS2 14/22 Linfeng_20130408_Smad2_6.raw High TAAENDFVTLKK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 237 2.87 0.00 1 11 50 2 668.86432 1336.72136 7.92 36.88 3549 3549 MS2 17/22 Linfeng_20130408_Smad2_9.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 256 2.86 0.00 0 25 50 2 597.31494 1193.62261 5.43 38.42 4155 4155 MS2 17/18 Linfeng_20130408_Smad2_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 83 2.86 0.00 0 23 50 2 660.80042 1320.59355 8.06 35.32 2769 2769 MS2 18/30 Linfeng_20130408_Smad2_10.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 323 2.86 0.00 0 12 41 2 487.27136 973.53545 4.23 38.31 3952 3952 MS2 13/14 Linfeng_20130408_Smad2_1.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 299 2.85 0.00 0 9 38 2 487.27158 973.53588 4.67 38.26 3880 3880 MS2 13/14 Linfeng_20130408_Smad2_3.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 246 2.84 0.00 0 8 13 2 597.31647 1193.62566 7.99 38.66 4187 4187 MS2 17/18 Linfeng_20130408_Smad2_5.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 313 2.84 0.00 0 27 50 2 487.27167 973.53606 4.86 37.99 4016 4016 MS2 13/14 Linfeng_20130408_Smad2_8.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 216 2.84 0.00 0 7 18 2 519.27026 1037.53325 6.76 38.63 4001 4001 MS2 14/16 Linfeng_20130408_Smad2_3.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 295 2.83 0.00 0 25 50 2 597.31714 1193.62700 9.11 38.29 3599 3599 MS2 17/18 Linfeng_20130408_Smad2_10.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 348 2.82 0.00 0 8 25 2 487.27216 973.53703 5.86 38.37 3728 3728 MS2 13/14 Linfeng_20130408_Smad2_2.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 270 2.79 0.00 1 12 50 2 696.34839 1391.68950 6.70 33.44 2523 2523 MS2 18/22 Linfeng_20130408_Smad2_1.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 267 2.79 0.00 0 29 18 2 604.81372 1208.62016 3.61 39.25 4379 4379 MS2 16/20 Linfeng_20130408_Smad2_5.raw High GFSSGSAVVSGGSR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 182 2.79 0.00 0 40 50 2 627.81238 1254.61748 8.06 35.75 3032 3032 MS2 19/26 Linfeng_20130408_Smad2_6.raw High GGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 161 2.79 0.00 0 9 50 2 599.28375 1197.56023 8.94 32.92 2243 2243 MS2 21/28 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 2.79 0.00 0 27 50 2 554.27930 1107.55132 7.55 35.14 2840 2840 MS2 15/16 Linfeng_20130408_Smad2_7.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 231 2.79 0.00 0 43 22 2 604.81439 1208.62151 4.72 39.22 4190 4190 MS2 16/20 Linfeng_20130408_Smad2_3.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 202 2.78 0.00 0 9 44 2 519.27069 1037.53411 7.58 38.54 4148 4148 MS2 14/16 Linfeng_20130408_Smad2_5.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 226 2.76 0.00 0 34 38 2 604.81604 1208.62480 7.45 39.01 4237 4237 MS2 16/20 Linfeng_20130408_Smad2_9.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 336 2.76 0.00 0 17 50 2 487.27057 973.53386 2.60 38.19 3672 3672 MS2 13/14 Linfeng_20130408_Smad2_7.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 273 2.75 0.00 0 46 34 2 604.81403 1208.62078 4.12 39.16 4042 4042 MS2 16/20 Linfeng_20130408_Smad2_6.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 206 2.75 0.00 0 18 50 2 519.27063 1037.53398 7.46 38.57 3861 3861 MS2 14/16 Linfeng_20130408_Smad2_6.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 233 2.74 0.00 0 39 14 2 604.81470 1208.62212 5.23 38.92 3797 3797 MS2 16/20 Linfeng_20130408_Smad2_10.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 326 2.73 0.00 0 50 50 2 487.27151 973.53575 4.54 38.02 3905 3905 MS2 13/14 Linfeng_20130408_Smad2_9.raw High YLDGLTAER Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 191 2.73 0.00 0 5 23 2 519.27081 1037.53435 7.81 38.56 4075 4075 MS2 15/16 Linfeng_20130408_Smad2_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 140 2.70 0.00 0 9 50 2 599.28333 1197.55937 8.23 32.57 2417 2417 MS2 20/28 Linfeng_20130408_Smad2_8.raw High STSSFScLSR Unambiguous 1 1 P35908 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.68 0.00 0 13 50 2 566.26282 1131.51836 7.44 36.51 3113 3113 MS2 15/18 Linfeng_20130408_Smad2_10.raw High LQGEIAHVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 160 2.68 0.00 0 22 50 2 497.79138 994.57549 7.48 33.96 2486 2486 MS2 14/16 Linfeng_20130408_Smad2_2.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 274 2.68 0.00 1 0 50 2 696.34869 1391.69011 7.14 33.48 2516 2516 MS2 16/22 Linfeng_20130408_Smad2_3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 235 2.68 0.00 0 23 50 2 554.27667 1107.54607 2.81 35.10 3104 3104 MS2 14/16 Linfeng_20130408_Smad2_5.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 272 2.65 0.00 1 17 50 2 696.34857 1391.68987 6.96 33.55 2395 2395 MS2 13/22 Linfeng_20130408_Smad2_2.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 119 2.65 0.00 0 19 50 2 578.27423 1155.54119 5.27 36.97 3592 3592 MS2 14/16 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 222 2.64 0.00 0 69 50 2 554.28033 1107.55339 9.43 35.24 3052 3052 MS2 14/16 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 199 2.64 0.00 0 18 50 2 554.27930 1107.55132 7.55 34.85 2654 2654 MS2 15/16 Linfeng_20130408_Smad2_10.raw High YEELQVTVGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 281 2.64 0.00 0 13 50 2 597.31586 1193.62444 6.97 38.59 3799 3799 MS2 16/18 Linfeng_20130408_Smad2_7.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 246 2.64 0.00 0 45 50 2 604.81561 1208.62395 6.74 39.00 4181 4181 MS2 14/20 Linfeng_20130408_Smad2_1.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 382 2.63 0.00 0 43 50 2 487.27261 973.53795 6.80 38.18 3952 3952 MS2 13/14 Linfeng_20130408_Smad2_4.raw High SKEEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 240 2.60 0.00 1 4 50 2 696.34949 1391.69170 8.28 33.34 2497 2497 MS2 17/22 Linfeng_20130408_Smad2_4.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 143 2.60 0.00 0 13 50 2 578.27515 1155.54302 6.85 37.00 3366 3366 MS2 13/16 Linfeng_20130408_Smad2_2.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 2.60 0.00 1 46 50 2 567.29004 1133.57280 9.53 33.82 2484 2484 MS2 14/16 Linfeng_20130408_Smad2_6.raw High LQGEIAHVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 168 2.60 0.00 0 38 50 2 497.79095 994.57463 6.62 33.76 2713 2713 MS2 15/16 Linfeng_20130408_Smad2_5.raw High STSSFScLSR Unambiguous 1 1 P35908 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 97 2.59 0.00 0 41 50 2 566.26215 1131.51702 6.26 36.84 3324 3324 MS2 14/18 Linfeng_20130408_Smad2_7.raw High EEAEALYHSK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 156 2.58 0.00 0 46 50 2 588.78510 1176.56291 8.27 34.38 2601 2601 MS2 12/18 Linfeng_20130408_Smad2_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 82 2.58 0.00 0 0 50 2 871.38617 1741.76506 9.48 32.90 2179 2179 MS2 15/44 Linfeng_20130408_Smad2_10.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 140 2.56 0.00 0 17 50 2 578.27515 1155.54302 6.85 36.89 3495 3495 MS2 13/16 Linfeng_20130408_Smad2_3.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw High LQGEIAHVK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 144 2.54 0.00 0 33 50 2 497.79153 994.57579 7.78 33.55 2678 2678 MS2 15/16 Linfeng_20130408_Smad2_8.raw High TAAENDFVTLK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 246 2.54 0.00 0 44 50 2 604.81549 1208.62370 6.54 39.04 3945 3945 MS2 13/20 Linfeng_20130408_Smad2_2.raw High SLVGLGGTK Unambiguous 1 1 P35908 CID 1.0000 0.0000 1 1 206 2.53 0.00 0 13 7 2 416.25150 831.49571 2.67 37.25 3300 3300 MS2 12/16 Linfeng_20130408_Smad2_10.raw P35527 "Keratin, type I cytoskeletal 9 OS=Homo sapiens GN=KRT9 PE=1 SV=3 - [K1C9_HUMAN]" 66.61 1 24 24 274 603.86 63.40 21 132 606.79 47.99 20 142 623 62.0 5.24 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 8 7.75 0.00 0 1 13 3 1075.10706 3223.30661 7.71 34.93 3232 3232 MS2 44/156 Linfeng_20130405_rIgG4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 10 7.70 0.00 0 0 50 3 1075.10913 3223.31284 9.64 34.86 2772 2772 MS2 42/156 Linfeng_20130408_Smad2_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 10 7.34 0.00 0 4 19 3 1075.10571 3223.30259 6.46 34.87 3073 3073 MS2 47/156 Linfeng_20130405_rIgG2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 10 7.28 0.00 0 3 42 3 1075.10498 3223.30039 5.78 34.95 3177 3177 MS2 45/156 Linfeng_20130405_rIgG9.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 174 7.11 0.00 1 6 4 3 656.02802 1966.06949 4.59 41.21 5097 5097 MS2 37/64 Linfeng_20130405_rIgG2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 10 6.89 0.00 0 0 10 3 1075.10571 3223.30259 6.46 34.93 2973 2973 MS2 41/156 Linfeng_20130405_rIgG7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 79 6.73 0.00 0 6 15 3 902.39789 2705.17911 6.60 41.20 4633 4633 MS2 45/124 Linfeng_20130408_Smad2_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 174 6.73 0.00 1 18 50 3 656.02753 1966.06803 3.85 41.18 4694 4694 MS2 35/64 Linfeng_20130408_Smad2_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 11 6.69 0.00 0 0 9 3 1075.10229 3223.29233 3.28 34.93 3315 3315 MS2 42/156 Linfeng_20130405_rIgG5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 8 6.63 0.00 0 4 13 3 1075.10706 3223.30661 7.71 34.90 3011 3011 MS2 37/156 Linfeng_20130405_rIgG3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 190 6.47 0.00 0 2 23 2 919.49109 1837.97490 5.12 41.56 4832 4832 MS2 25/30 Linfeng_20130408_Smad2_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 10 6.45 0.00 0 0 50 3 1075.10828 3223.31028 8.85 34.85 2890 2890 MS2 41/156 Linfeng_20130408_Smad2_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 76 6.44 0.00 0 4 1 3 902.39679 2705.17582 5.38 41.27 5121 5121 MS2 39/124 Linfeng_20130405_rIgG2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 110 6.25 0.00 0 4 43 3 837.38794 2510.14927 6.93 40.52 4474 4474 MS2 34/88 Linfeng_20130408_Smad2_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 199 6.23 0.00 0 7 13 2 919.48981 1837.97234 3.72 41.59 5069 5069 MS2 26/30 Linfeng_20130408_Smad2_1.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 31 6.21 0.00 1 1 50 3 697.97186 2091.90104 8.90 31.82 2250 2250 MS2 38/100 Linfeng_20130405_rIgG3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 75 6.21 0.00 0 17 12 3 902.39709 2705.17673 5.72 41.26 4939 4939 MS2 42/124 Linfeng_20130408_Smad2_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 75 6.10 0.00 0 1 2 3 902.39441 2705.16867 2.74 41.31 5023 5023 MS2 44/124 Linfeng_20130405_rIgG7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 192 6.10 0.00 0 1 3 2 919.49066 1837.97405 4.65 41.64 5271 5271 MS2 26/30 Linfeng_20130405_rIgG2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 186 5.98 0.00 0 16 50 2 919.49139 1837.97551 5.45 41.62 4787 4787 MS2 26/30 Linfeng_20130408_Smad2_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 8 5.96 0.00 0 0 50 3 1075.10681 3223.30588 7.49 34.83 2756 2756 MS2 36/156 Linfeng_20130408_Smad2_7.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 125 5.89 0.00 0 1 7 2 1102.01672 2203.02617 5.26 42.59 5647 5647 MS2 23/34 Linfeng_20130405_rIgG3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 77 5.85 0.00 0 3 10 3 902.39618 2705.17398 4.71 41.20 4700 4700 MS2 41/124 Linfeng_20130408_Smad2_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 185 5.82 0.00 0 10 10 2 919.49188 1837.97649 5.98 41.68 5510 5510 MS2 24/30 Linfeng_20130405_rIgG4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 163 5.74 0.00 0 4 3 3 1088.84961 3264.53427 6.22 42.04 5294 5294 MS2 35/112 Linfeng_20130405_rIgG1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 208 5.71 0.00 0 14 10 2 919.49054 1837.97380 4.52 41.66 5262 5262 MS2 25/30 Linfeng_20130405_rIgG3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 98 5.70 0.00 0 7 16 3 837.38470 2510.13956 3.06 40.46 4829 4829 MS2 36/88 Linfeng_20130408_Smad2_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 164 5.69 0.00 0 2 18 3 1088.84924 3264.53318 5.88 41.99 4916 4916 MS2 39/112 Linfeng_20130408_Smad2_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 74 5.68 0.00 0 7 4 3 902.39502 2705.17051 3.42 41.29 5109 5109 MS2 40/124 Linfeng_20130405_rIgG6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 280 5.68 0.00 1 3 13 3 793.07098 2377.19840 4.26 41.16 4687 4687 MS2 34/80 Linfeng_20130408_Smad2_6.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 167 5.67 0.00 0 12 8 3 1088.85022 3264.53611 6.78 42.05 5660 5660 MS2 39/112 Linfeng_20130405_rIgG9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 164 5.67 0.00 0 4 17 3 1088.84949 3264.53391 6.11 41.93 5201 5201 MS2 35/112 Linfeng_20130408_Smad2_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 165 5.64 0.00 0 1 1 3 1088.84888 3264.53208 5.55 42.00 5420 5420 MS2 36/112 Linfeng_20130405_rIgG2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 164 5.64 0.00 0 1 2 3 1088.84961 3264.53427 6.22 41.99 5400 5400 MS2 36/112 Linfeng_20130405_rIgG3.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 106 5.63 0.00 0 12 15 2 1102.01196 2203.01665 0.94 42.56 5448 5448 MS2 23/34 Linfeng_20130408_Smad2_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 163 5.62 0.00 0 3 1 3 1088.84937 3264.53354 6.00 42.02 5650 5650 MS2 34/112 Linfeng_20130405_rIgG4.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 117 5.62 0.00 0 1 14 2 1102.01526 2203.02324 3.93 42.53 5331 5331 MS2 24/34 Linfeng_20130408_Smad2_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 108 5.60 0.00 0 11 9 3 837.38684 2510.14597 5.62 40.70 4765 4765 MS2 34/88 Linfeng_20130405_rIgG1.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 117 5.58 0.00 0 4 14 2 1102.01575 2203.02422 4.37 42.54 5568 5568 MS2 24/34 Linfeng_20130408_Smad2_5.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 119 5.56 0.00 0 3 32 2 1102.01599 2203.02471 4.60 42.49 5176 5176 MS2 24/34 Linfeng_20130408_Smad2_6.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 139 5.56 0.00 0 1 7 3 735.01233 2203.02243 3.56 42.53 5328 5328 MS2 32/68 Linfeng_20130408_Smad2_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 119 5.56 0.00 0 11 29 3 837.38977 2510.15476 9.12 40.53 4806 4806 MS2 35/88 Linfeng_20130408_Smad2_5.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 119 5.56 0.00 0 3 16 2 1102.01550 2203.02373 4.15 42.48 5599 5599 MS2 24/34 Linfeng_20130408_Smad2_8.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 118 5.54 0.00 0 0 25 2 1102.01550 2203.02373 4.15 42.57 5122 5122 MS2 25/34 Linfeng_20130408_Smad2_2.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 3 5.50 0.00 0 1 25 4 1243.99902 4972.97426 7.56 33.24 2611 2611 MS2 43/390 Linfeng_20130405_rIgG2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 79 5.50 0.00 0 6 11 3 902.39771 2705.17856 6.40 41.22 4845 4845 MS2 37/124 Linfeng_20130408_Smad2_3.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 111 5.47 0.00 0 0 34 2 1102.01526 2203.02324 3.93 42.51 5414 5414 MS2 24/34 Linfeng_20130408_Smad2_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 69 5.41 0.00 0 3 6 3 902.39337 2705.16556 1.59 41.16 5027 5027 MS2 40/124 Linfeng_20130408_Smad2_5.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 113 5.39 0.00 0 3 6 2 1102.01526 2203.02324 3.93 42.61 5525 5525 MS2 24/34 Linfeng_20130405_rIgG1.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 121 5.38 0.00 0 3 5 2 1102.01660 2203.02593 5.15 42.63 5900 5900 MS2 25/34 Linfeng_20130405_rIgG4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 107 5.27 0.00 0 2 20 3 837.38660 2510.14524 5.32 40.58 4427 4427 MS2 35/88 Linfeng_20130408_Smad2_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 18 5.27 0.00 0 0 39 2 896.37561 1791.74394 9.01 31.71 2419 2419 MS2 23/44 Linfeng_20130405_rIgG4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 119 5.25 0.00 0 1 31 3 837.38922 2510.15311 8.46 40.51 4703 4703 MS2 35/88 Linfeng_20130408_Smad2_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 70 5.23 0.00 0 0 50 2 1353.09546 2705.18364 8.28 41.26 4659 4659 MS2 25/62 Linfeng_20130408_Smad2_2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 34 5.22 0.00 1 0 50 3 697.97070 2091.89756 7.23 31.90 2329 2329 MS2 38/100 Linfeng_20130405_rIgG9.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 119 5.20 0.00 0 14 5 2 1102.01575 2203.02422 4.37 42.60 5670 5670 MS2 22/34 Linfeng_20130405_rIgG2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 120 5.19 0.00 0 20 50 3 837.38965 2510.15439 8.97 40.62 4446 4446 MS2 33/88 Linfeng_20130408_Smad2_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 277 5.19 0.00 1 9 21 3 793.07050 2377.19693 3.65 41.24 4932 4932 MS2 38/80 Linfeng_20130408_Smad2_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 61 5.14 0.00 0 0 34 2 1353.08936 2705.17143 3.76 41.22 4707 4707 MS2 24/62 Linfeng_20130408_Smad2_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 77 5.14 0.00 0 5 11 3 902.39746 2705.17783 6.13 41.19 4926 4926 MS2 45/124 Linfeng_20130408_Smad2_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 102 5.14 0.00 0 8 7 3 837.38586 2510.14304 4.45 40.68 4786 4786 MS2 37/88 Linfeng_20130405_rIgG7.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 271 5.14 0.00 1 6 8 3 793.06982 2377.19492 2.80 41.15 5023 5023 MS2 33/80 Linfeng_20130408_Smad2_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 59 5.12 0.00 0 1 4 2 1353.08557 2705.16387 0.97 41.17 5031 5031 MS2 25/62 Linfeng_20130408_Smad2_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 108 5.11 0.00 0 2 43 3 837.38660 2510.14524 5.32 40.30 4235 4235 MS2 36/88 Linfeng_20130408_Smad2_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 230 5.10 0.00 1 0 38 3 968.14594 2902.42325 4.36 42.57 5207 5207 MS2 34/96 Linfeng_20130408_Smad2_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 102 5.10 0.00 0 4 2 3 837.38580 2510.14286 4.38 40.66 4872 4872 MS2 34/88 Linfeng_20130405_rIgG3.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 141 5.09 0.00 0 0 12 3 735.01257 2203.02317 3.90 42.54 5569 5569 MS2 30/68 Linfeng_20130408_Smad2_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 126 5.08 0.00 0 8 50 3 837.39001 2510.15549 9.41 40.55 4623 4623 MS2 36/88 Linfeng_20130408_Smad2_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 76 5.07 0.00 0 12 4 3 902.39471 2705.16959 3.08 41.33 5366 5366 MS2 36/124 Linfeng_20130405_rIgG4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 17 5.07 0.00 0 5 1 2 896.37537 1791.74346 8.74 32.69 2482 2482 MS2 23/44 Linfeng_20130405_rIgG2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 106 5.06 0.00 0 5 7 3 837.38629 2510.14432 4.96 40.71 4889 4889 MS2 32/88 Linfeng_20130405_rIgG6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 64 5.04 0.00 0 0 17 2 1353.08704 2705.16680 2.05 41.30 5020 5020 MS2 24/62 Linfeng_20130405_rIgG7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 165 5.03 0.00 0 5 31 3 1088.84875 3264.53171 5.43 41.95 4900 4900 MS2 35/112 Linfeng_20130408_Smad2_7.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 266 5.02 0.00 1 3 23 3 793.07269 2377.20353 6.42 41.10 4943 4943 MS2 36/80 Linfeng_20130408_Smad2_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 68 5.02 0.00 0 0 34 2 1353.09314 2705.17900 6.56 41.20 4931 4931 MS2 23/62 Linfeng_20130408_Smad2_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 102 4.99 0.00 0 11 4 3 837.38568 2510.14249 4.23 40.66 5258 5258 MS2 34/88 Linfeng_20130405_rIgG5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 62 4.96 0.00 0 2 3 2 1353.08704 2705.16680 2.05 41.32 5121 5121 MS2 26/62 Linfeng_20130405_rIgG6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 108 4.94 0.00 0 8 1 3 837.38641 2510.14469 5.11 40.66 4891 4891 MS2 37/88 Linfeng_20130405_rIgG2.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 138 4.94 0.00 0 3 13 3 735.01227 2203.02225 3.48 42.50 5407 5407 MS2 32/68 Linfeng_20130408_Smad2_4.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 126 4.92 0.00 0 12 6 2 1102.01685 2203.02641 5.37 42.64 6097 6097 MS2 24/34 Linfeng_20130405_rIgG8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 267 4.89 0.00 1 1 11 3 793.07233 2377.20243 5.96 41.20 4631 4631 MS2 33/80 Linfeng_20130408_Smad2_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 4.87 0.00 0 1 2 3 613.32874 1837.97165 3.35 41.65 5497 5497 MS2 31/60 Linfeng_20130405_rIgG4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 179 4.85 0.00 1 4 8 3 656.02795 1966.06931 4.50 41.29 5110 5110 MS2 29/64 Linfeng_20130405_rIgG3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 195 4.84 0.00 0 0 28 2 793.88660 1586.76592 0.12 37.54 3518 3518 MS2 23/26 Linfeng_20130408_Smad2_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 66 4.84 0.00 0 0 5 2 1353.08826 2705.16924 2.95 41.29 4988 4988 MS2 22/62 Linfeng_20130405_rIgG1.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 138 4.83 0.00 0 2 7 3 735.01178 2203.02079 2.82 42.59 5459 5459 MS2 30/68 Linfeng_20130408_Smad2_1.raw High SDLEmQYETLQEELmALK Unambiguous 1 1 P35527 M5(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 141 4.83 0.00 0 5 11 3 735.01270 2203.02353 4.06 42.49 5602 5602 MS2 31/68 Linfeng_20130408_Smad2_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 68 4.83 0.00 0 0 25 2 1353.09277 2705.17827 6.29 41.24 4852 4852 MS2 27/62 Linfeng_20130408_Smad2_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 59 4.82 0.00 0 3 2 2 1353.08728 2705.16728 2.23 41.31 5117 5117 MS2 22/62 Linfeng_20130405_rIgG3.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 3 4.82 0.00 0 0 40 4 1244.00037 4972.97963 8.64 33.24 2741 2741 MS2 40/390 Linfeng_20130405_rIgG4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 107 4.81 0.00 0 7 8 3 837.38641 2510.14469 5.11 40.70 5125 5125 MS2 33/88 Linfeng_20130405_rIgG4.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 191 4.81 0.00 0 0 21 2 793.88788 1586.76848 1.73 37.53 3755 3755 MS2 23/26 Linfeng_20130405_rIgG1.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 276 4.81 0.00 1 3 2 3 793.07092 2377.19822 4.19 41.29 5353 5353 MS2 35/80 Linfeng_20130405_rIgG4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 16 4.79 0.00 0 4 50 2 896.37640 1791.74553 9.90 32.24 2325 2325 MS2 19/44 Linfeng_20130408_Smad2_5.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 254 4.79 0.00 1 3 32 3 793.07410 2377.20774 8.19 41.25 4654 4654 MS2 34/80 Linfeng_20130408_Smad2_2.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 205 4.74 0.00 0 20 50 2 793.89258 1586.77788 7.66 36.84 3323 3323 MS2 23/26 Linfeng_20130408_Smad2_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 19 4.74 0.00 0 6 50 2 896.37451 1791.74175 7.78 32.58 2371 2371 MS2 19/44 Linfeng_20130405_rIgG1.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 280 4.73 0.00 1 18 4 3 793.07104 2377.19858 4.34 41.27 5527 5527 MS2 38/80 Linfeng_20130405_rIgG8.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 200 4.73 0.00 0 0 26 2 793.88690 1586.76653 0.50 37.37 3714 3714 MS2 23/26 Linfeng_20130408_Smad2_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 93 4.72 0.00 0 5 14 3 837.38507 2510.14066 3.50 40.75 4686 4686 MS2 32/88 Linfeng_20130405_rIgG10.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 191 4.71 0.00 0 0 15 2 793.88763 1586.76799 1.42 37.54 3892 3892 MS2 22/26 Linfeng_20130405_rIgG2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 211 4.71 0.00 0 3 5 3 613.32928 1837.97330 4.25 41.64 5158 5158 MS2 32/60 Linfeng_20130405_rIgG7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 113 4.68 0.00 0 6 8 3 837.38806 2510.14963 7.08 40.64 4717 4717 MS2 34/88 Linfeng_20130408_Smad2_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 4.68 0.00 0 1 3 3 613.32910 1837.97275 3.95 41.54 4822 4822 MS2 29/60 Linfeng_20130408_Smad2_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 216 4.67 0.00 0 2 15 3 613.32953 1837.97403 4.65 41.56 4761 4761 MS2 32/60 Linfeng_20130408_Smad2_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 70 4.66 0.00 0 0 44 2 1353.09241 2705.17754 6.02 41.22 4638 4638 MS2 21/62 Linfeng_20130408_Smad2_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 15 4.66 0.00 0 4 50 2 896.37415 1791.74101 7.37 32.53 2660 2660 MS2 18/44 Linfeng_20130405_rIgG5.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 34 4.66 0.00 1 0 50 3 697.97089 2091.89811 7.50 31.91 2267 2267 MS2 33/100 Linfeng_20130405_rIgG1.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 204 4.65 0.00 0 25 50 2 793.89294 1586.77861 8.12 36.88 3492 3492 MS2 22/26 Linfeng_20130408_Smad2_3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 194 4.64 0.00 0 0 22 2 793.88812 1586.76897 2.04 37.54 3854 3854 MS2 23/26 Linfeng_20130405_rIgG3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 66 4.63 0.00 0 4 1 2 1353.09119 2705.17510 5.12 41.28 5123 5123 MS2 23/62 Linfeng_20130405_rIgG2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 70 4.63 0.00 0 7 6 2 1353.09033 2705.17339 4.49 41.35 5384 5384 MS2 22/62 Linfeng_20130405_rIgG9.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 197 4.63 0.00 0 0 29 2 793.88672 1586.76616 0.27 37.54 3779 3779 MS2 22/26 Linfeng_20130405_rIgG7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 17 4.63 0.00 0 0 50 2 896.37494 1791.74260 8.26 32.66 2503 2503 MS2 21/44 Linfeng_20130405_rIgG9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 163 4.62 0.00 0 16 2 4 816.88885 3264.53359 6.01 42.01 5422 5422 MS2 41/168 Linfeng_20130405_rIgG2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 17 4.61 0.00 0 4 50 2 896.37482 1791.74236 8.12 32.66 2310 2310 MS2 20/44 Linfeng_20130408_Smad2_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 257 4.60 0.00 1 5 7 3 968.14838 2902.43058 6.89 42.68 5922 5922 MS2 32/96 Linfeng_20130405_rIgG4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 18 4.60 0.00 0 18 50 3 597.91632 1791.73441 3.69 32.62 2420 2420 MS2 38/88 Linfeng_20130408_Smad2_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 19 4.60 0.00 0 0 50 2 896.37256 1791.73784 5.60 32.61 2602 2602 MS2 21/44 Linfeng_20130405_rIgG8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 263 4.59 0.00 1 2 1 3 793.07178 2377.20078 5.27 41.27 5122 5122 MS2 33/80 Linfeng_20130405_rIgG2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 108 4.58 0.00 0 3 4 3 837.38641 2510.14469 5.11 40.75 5153 5153 MS2 33/88 Linfeng_20130405_rIgG9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 274 4.57 0.00 1 11 5 3 793.06989 2377.19510 2.88 41.29 5017 5017 MS2 34/80 Linfeng_20130405_rIgG7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 77 4.57 0.00 0 11 6 3 902.39581 2705.17289 4.30 41.30 4990 4990 MS2 34/124 Linfeng_20130405_rIgG1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 77 4.54 0.00 0 23 17 3 902.39734 2705.17746 5.99 41.13 4951 4951 MS2 34/124 Linfeng_20130408_Smad2_9.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 31 4.54 0.00 1 2 50 3 697.97168 2091.90049 8.64 31.81 2312 2312 MS2 34/100 Linfeng_20130405_rIgG2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 122 4.52 0.00 0 8 50 3 837.38959 2510.15421 8.90 40.49 4733 4733 MS2 36/88 Linfeng_20130408_Smad2_9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 275 4.47 0.00 1 2 3 3 793.06989 2377.19510 2.88 41.32 5120 5120 MS2 34/80 Linfeng_20130405_rIgG6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 218 4.45 0.00 0 23 2 3 613.32880 1837.97184 3.45 41.62 5670 5670 MS2 30/60 Linfeng_20130405_rIgG8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 82 4.45 0.00 0 6 28 3 902.39917 2705.18296 8.02 41.28 4665 4665 MS2 39/124 Linfeng_20130408_Smad2_2.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 200 4.45 0.00 0 20 50 2 793.89417 1586.78105 9.66 36.87 3376 3376 MS2 23/26 Linfeng_20130408_Smad2_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 214 4.43 0.00 0 6 4 3 613.32983 1837.97495 5.15 41.61 5258 5258 MS2 33/60 Linfeng_20130405_rIgG2.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 209 4.43 0.00 0 21 9 3 529.59406 1586.76761 1.19 37.55 3895 3895 MS2 30/52 Linfeng_20130405_rIgG2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 216 4.41 0.00 0 13 23 3 613.32880 1837.97184 3.45 41.59 4777 4777 MS2 31/60 Linfeng_20130408_Smad2_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 233 4.41 0.00 1 1 7 3 968.14789 2902.42911 6.38 42.70 5562 5562 MS2 30/96 Linfeng_20130405_rIgG1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 18 4.40 0.00 0 6 50 2 896.37598 1791.74468 9.42 32.26 2271 2271 MS2 22/44 Linfeng_20130405_rIgG7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 17 4.39 0.00 0 4 50 2 896.37634 1791.74541 9.83 32.72 2190 2190 MS2 21/44 Linfeng_20130408_Smad2_2.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 201 4.39 0.00 0 0 17 2 793.88727 1586.76726 0.96 37.60 3834 3834 MS2 23/26 Linfeng_20130405_rIgG6.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 201 4.37 0.00 0 28 21 2 616.80554 1232.60381 4.80 34.36 2983 2983 MS2 25/30 Linfeng_20130405_rIgG9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 78 4.37 0.00 0 0 11 2 1255.57593 2510.14458 5.06 40.69 4902 4902 MS2 25/44 Linfeng_20130405_rIgG2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 31 4.37 0.00 1 0 50 3 697.96875 2091.89170 4.43 31.76 2219 2219 MS2 36/100 Linfeng_20130408_Smad2_5.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 205 4.35 0.00 0 25 8 3 529.59320 1586.76505 -0.43 37.53 3747 3747 MS2 27/52 Linfeng_20130408_Smad2_1.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 199 4.35 0.00 0 0 31 2 793.88715 1586.76702 0.81 37.64 3673 3673 MS2 23/26 Linfeng_20130405_rIgG10.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 205 4.34 0.00 0 0 17 3 529.59326 1586.76523 -0.31 37.56 3524 3524 MS2 27/52 Linfeng_20130408_Smad2_2.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 197 4.34 0.00 0 0 20 2 793.88751 1586.76775 1.27 37.55 4066 4066 MS2 23/26 Linfeng_20130405_rIgG4.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 216 4.32 0.00 0 19 7 3 529.59479 1586.76981 2.57 37.56 4116 4116 MS2 30/52 Linfeng_20130405_rIgG5.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 4.31 0.00 0 14 8 3 529.59381 1586.76688 0.72 37.59 3866 3866 MS2 29/52 Linfeng_20130405_rIgG3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 18 4.30 0.00 0 0 50 2 896.37439 1791.74150 7.65 32.47 2387 2387 MS2 18/44 Linfeng_20130405_rIgG6.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 188 4.30 0.00 0 8 16 2 793.88788 1586.76848 1.73 37.47 4122 4122 MS2 23/26 Linfeng_20130405_rIgG8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 19 4.29 0.00 0 0 50 2 896.37195 1791.73662 4.92 32.25 2310 2310 MS2 20/44 Linfeng_20130405_rIgG3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 205 4.29 0.00 0 7 12 2 793.88904 1586.77080 3.19 37.51 4105 4105 MS2 22/26 Linfeng_20130405_rIgG5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 223 4.29 0.00 0 14 15 3 613.32819 1837.97000 2.46 41.55 4967 4967 MS2 31/60 Linfeng_20130408_Smad2_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 229 4.28 0.00 1 6 14 3 968.14642 2902.42472 4.87 42.65 5672 5672 MS2 30/96 Linfeng_20130405_rIgG3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 204 4.26 0.00 0 11 29 3 529.59418 1586.76798 1.42 37.28 3811 3811 MS2 30/52 Linfeng_20130408_Smad2_8.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 203 4.26 0.00 0 20 11 3 529.59418 1586.76798 1.42 37.58 3762 3762 MS2 28/52 Linfeng_20130405_rIgG1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 218 4.25 0.00 0 13 13 3 613.32892 1837.97220 3.65 41.51 5046 5046 MS2 31/60 Linfeng_20130408_Smad2_4.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 60 4.25 0.00 1 0 19 3 733.65729 2198.95731 5.74 34.62 3066 3066 MS2 37/96 Linfeng_20130405_rIgG9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 209 4.23 0.00 0 0 1 3 613.32990 1837.97513 5.25 41.62 5243 5243 MS2 31/60 Linfeng_20130405_rIgG3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 209 4.21 0.00 0 13 15 3 529.59436 1586.76853 1.76 37.65 3851 3851 MS2 28/52 Linfeng_20130405_rIgG6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 21 4.19 0.00 0 4 50 3 597.91998 1791.74540 9.82 32.69 2316 2316 MS2 37/88 Linfeng_20130408_Smad2_3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 202 4.18 0.00 0 3 50 2 793.89233 1586.77739 7.35 37.00 3602 3602 MS2 21/26 Linfeng_20130408_Smad2_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 19 4.18 0.00 0 0 50 2 896.37341 1791.73955 6.56 32.82 2640 2640 MS2 19/44 Linfeng_20130405_rIgG4.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 285 4.18 0.00 0 8 50 2 658.34949 1315.69170 4.88 39.62 4322 4322 MS2 19/22 Linfeng_20130408_Smad2_3.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 4.17 0.00 0 22 25 3 529.59369 1586.76651 0.49 37.41 3474 3474 MS2 27/52 Linfeng_20130408_Smad2_7.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 202 4.16 0.00 0 17 41 3 529.59418 1586.76798 1.42 37.31 3678 3678 MS2 28/52 Linfeng_20130408_Smad2_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 217 4.16 0.00 0 4 1 3 613.32959 1837.97422 4.75 41.64 5125 5125 MS2 29/60 Linfeng_20130405_rIgG1.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 276 4.15 0.00 0 5 50 2 658.35168 1315.69609 8.22 39.61 4411 4411 MS2 19/22 Linfeng_20130408_Smad2_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 277 4.13 0.00 1 4 5 3 793.07056 2377.19712 3.73 41.29 4989 4989 MS2 33/80 Linfeng_20130405_rIgG1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 232 4.13 0.00 1 3 5 3 968.14746 2902.42783 5.94 42.70 5921 5921 MS2 31/96 Linfeng_20130405_rIgG9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 204 4.11 0.00 0 38 50 2 616.80756 1232.60784 8.07 34.01 2614 2614 MS2 23/30 Linfeng_20130408_Smad2_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 214 4.11 0.00 0 7 50 2 616.80731 1232.60735 7.67 34.35 2786 2786 MS2 23/30 Linfeng_20130408_Smad2_1.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 202 4.11 0.00 0 6 11 3 529.59418 1586.76798 1.42 37.60 4076 4076 MS2 28/52 Linfeng_20130405_rIgG4.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 204 4.09 0.00 0 13 35 3 529.59424 1586.76816 1.53 37.44 3530 3530 MS2 30/52 Linfeng_20130408_Smad2_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 66 4.09 0.00 0 7 3 2 1353.09009 2705.17290 4.31 41.33 5551 5551 MS2 23/62 Linfeng_20130405_rIgG8.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 263 4.09 0.00 0 47 50 2 658.35065 1315.69402 6.64 39.45 4385 4385 MS2 19/22 Linfeng_20130408_Smad2_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 201 4.06 0.00 0 31 50 2 616.80682 1232.60637 6.88 33.89 2774 2774 MS2 20/30 Linfeng_20130405_rIgG2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 67 4.05 0.00 0 1 2 2 1353.08777 2705.16826 2.59 41.32 5362 5362 MS2 22/62 Linfeng_20130405_rIgG4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 254 4.05 0.00 1 3 7 3 968.14838 2902.43058 6.89 42.68 6116 6116 MS2 31/96 Linfeng_20130405_rIgG8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 19 4.04 0.00 0 12 50 3 597.91882 1791.74192 7.88 32.71 2326 2326 MS2 34/88 Linfeng_20130408_Smad2_1.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 267 4.04 0.00 1 2 14 3 793.07251 2377.20298 6.19 41.23 4848 4848 MS2 32/80 Linfeng_20130408_Smad2_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 69 4.03 0.00 0 3 21 2 1353.09070 2705.17412 4.76 41.37 4923 4923 MS2 23/62 Linfeng_20130405_rIgG10.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 268 3.99 0.00 1 19 6 3 793.07196 2377.20133 5.50 41.35 5382 5382 MS2 36/80 Linfeng_20130405_rIgG9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 230 3.98 0.00 1 1 1 3 968.14594 2902.42325 4.36 42.66 5691 5691 MS2 27/96 Linfeng_20130405_rIgG2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 209 3.94 0.00 0 40 50 2 616.80756 1232.60784 8.07 34.39 2603 2603 MS2 21/30 Linfeng_20130408_Smad2_2.raw High YcGQLQmIQEQISNLEAQITDVR Unambiguous 1 1 P35527 C2(Carbamidomethyl); M7(Oxidation) CID 1.0000 0.0000 1 1 251 3.92 0.00 0 14 10 3 918.45239 2753.34262 6.98 43.08 6222 6222 MS2 25/88 Linfeng_20130405_rIgG5.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 203 3.92 0.00 0 12 30 3 529.59418 1586.76798 1.42 37.41 3721 3721 MS2 27/52 Linfeng_20130408_Smad2_4.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 60 3.91 0.00 1 3 50 3 733.65765 2198.95841 6.24 34.53 2967 2967 MS2 34/96 Linfeng_20130405_rIgG2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 15 3.91 0.00 0 0 50 2 896.37506 1791.74285 8.40 32.67 2285 2285 MS2 21/44 Linfeng_20130405_rIgG10.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 195 3.90 0.00 0 5 17 2 793.88788 1586.76848 1.73 37.54 4022 4022 MS2 23/26 Linfeng_20130405_rIgG9.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 270 3.90 0.00 1 13 14 3 793.07208 2377.20169 5.65 41.36 4917 4917 MS2 30/80 Linfeng_20130405_rIgG10.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 255 3.90 0.00 0 18 50 2 658.34882 1315.69036 3.86 39.55 4107 4107 MS2 19/22 Linfeng_20130408_Smad2_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 21 3.89 0.00 0 21 50 3 597.91998 1791.74540 9.82 32.53 2227 2227 MS2 32/88 Linfeng_20130408_Smad2_9.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 193 3.88 0.00 0 15 50 2 793.89410 1586.78093 9.58 36.85 3560 3560 MS2 20/26 Linfeng_20130408_Smad2_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 216 3.88 0.00 0 10 15 3 613.32751 1837.96799 1.36 41.50 5158 5158 MS2 27/60 Linfeng_20130408_Smad2_5.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 63 3.86 0.00 1 3 50 3 733.65784 2198.95896 6.49 34.62 2875 2875 MS2 31/96 Linfeng_20130405_rIgG1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 89 3.83 0.00 0 0 50 2 1255.57825 2510.14922 6.91 40.66 4724 4724 MS2 24/44 Linfeng_20130408_Smad2_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 214 3.82 0.00 0 25 7 3 613.32959 1837.97422 4.75 41.56 5057 5057 MS2 32/60 Linfeng_20130408_Smad2_1.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 276 3.81 0.00 1 12 31 3 793.07086 2377.19803 4.11 41.13 5072 5072 MS2 35/80 Linfeng_20130408_Smad2_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 8 3.77 0.00 0 0 50 3 1075.10767 3223.30844 8.28 34.58 2582 2582 MS2 31/156 Linfeng_20130408_Smad2_10.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 276 3.77 0.00 0 33 50 2 658.35193 1315.69658 8.59 39.46 4501 4501 MS2 19/22 Linfeng_20130408_Smad2_8.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 206 3.76 0.00 0 44 17 3 529.59454 1586.76908 2.11 37.55 4145 4145 MS2 30/52 Linfeng_20130405_rIgG8.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 205 3.75 0.00 0 5 7 3 529.59320 1586.76505 -0.43 37.47 3667 3667 MS2 22/52 Linfeng_20130408_Smad2_3.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 257 3.74 0.00 0 23 50 2 658.35004 1315.69280 5.71 39.69 4414 4414 MS2 19/22 Linfeng_20130408_Smad2_1.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 242 3.72 0.00 0 36 23 2 658.34882 1315.69036 3.86 39.78 4949 4949 MS2 19/22 Linfeng_20130405_rIgG8.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 248 3.69 0.00 0 14 50 2 658.35034 1315.69341 6.18 39.61 4185 4185 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 210 3.66 0.00 0 29 50 2 616.80737 1232.60747 7.77 33.89 2747 2747 MS2 20/30 Linfeng_20130408_Smad2_5.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 212 3.66 0.00 0 20 25 3 529.59369 1586.76651 0.49 37.61 3792 3792 MS2 28/52 Linfeng_20130405_rIgG7.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 199 3.64 0.00 0 27 50 2 793.89233 1586.77739 7.35 36.85 3622 3622 MS2 20/26 Linfeng_20130408_Smad2_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 17 3.60 0.00 0 0 50 2 896.37518 1791.74309 8.53 31.68 2294 2294 MS2 17/44 Linfeng_20130405_rIgG2.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 53 3.60 0.00 1 0 50 2 1099.98315 2198.95903 6.53 34.65 3005 3005 MS2 18/48 Linfeng_20130405_rIgG2.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 257 3.56 0.00 0 29 50 2 658.34985 1315.69243 5.43 39.68 4151 4151 MS2 19/22 Linfeng_20130408_Smad2_2.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 281 3.55 0.00 0 34 23 2 658.34943 1315.69158 4.78 39.86 4625 4625 MS2 19/22 Linfeng_20130405_rIgG2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 18 3.55 0.00 0 0 50 2 896.37268 1791.73808 5.74 32.11 2021 2021 MS2 18/44 Linfeng_20130408_Smad2_10.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 201 3.52 0.00 0 20 25 3 529.59424 1586.76816 1.53 37.39 3786 3786 MS2 21/52 Linfeng_20130408_Smad2_5.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 263 3.49 0.00 0 26 24 2 658.34814 1315.68901 2.84 39.81 4813 4813 MS2 19/22 Linfeng_20130405_rIgG4.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 267 3.48 0.00 0 37 50 2 658.34845 1315.68962 3.30 39.88 4605 4605 MS2 19/22 Linfeng_20130405_rIgG3.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 269 3.47 0.00 0 42 50 2 658.34924 1315.69121 4.51 39.89 4521 4521 MS2 19/22 Linfeng_20130405_rIgG7.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 198 3.44 0.00 0 34 50 2 793.89240 1586.77751 7.43 36.66 3637 3637 MS2 22/26 Linfeng_20130408_Smad2_8.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 219 3.44 0.00 0 19 50 3 529.59485 1586.76999 2.69 37.13 3267 3267 MS2 25/52 Linfeng_20130408_Smad2_10.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 172 3.42 0.00 0 50 50 2 793.89331 1586.77934 8.58 36.48 3417 3417 MS2 20/26 Linfeng_20130408_Smad2_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 216 3.41 0.00 0 27 50 2 616.80725 1232.60723 7.57 33.52 2810 2810 MS2 20/30 Linfeng_20130405_rIgG4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 292 3.40 0.00 1 5 9 3 617.98169 1851.93052 1.90 41.36 5157 5157 MS2 29/56 Linfeng_20130405_rIgG2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 20 3.40 0.00 0 5 50 3 597.91974 1791.74466 9.41 32.65 2232 2232 MS2 29/88 Linfeng_20130408_Smad2_7.raw High DQIVDLTVGNNK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 250 3.39 0.00 0 32 50 2 658.34998 1315.69267 5.62 39.30 3919 3919 MS2 19/22 Linfeng_20130408_Smad2_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 211 3.38 0.00 0 34 50 2 616.80719 1232.60710 7.47 33.89 2699 2699 MS2 20/30 Linfeng_20130405_rIgG3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 31 3.37 0.00 1 0 50 3 697.97131 2091.89939 8.11 31.92 2218 2218 MS2 27/100 Linfeng_20130405_rIgG7.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 199 3.34 0.00 0 50 7 3 529.59460 1586.76926 2.22 37.60 4040 4040 MS2 23/52 Linfeng_20130405_rIgG9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 202 3.32 0.00 0 70 50 2 616.80719 1232.60710 7.47 34.00 2697 2697 MS2 18/30 Linfeng_20130405_rIgG1.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 62 3.32 0.00 1 2 50 3 733.65863 2198.96134 7.57 34.54 2898 2898 MS2 31/96 Linfeng_20130405_rIgG3.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 62 3.24 0.00 1 2 50 3 733.65820 2198.96006 6.99 34.64 2881 2881 MS2 34/96 Linfeng_20130405_rIgG7.raw High VQALEEANNDLENK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 179 3.23 0.00 0 23 50 2 793.89349 1586.77971 8.81 36.56 3131 3131 MS2 17/26 Linfeng_20130408_Smad2_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 203 3.21 0.00 0 34 50 2 616.80591 1232.60454 5.39 34.52 3098 3098 MS2 19/30 Linfeng_20130405_rIgG4.raw High IKFEMEQNLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 251 3.20 0.00 1 8 6 3 436.56635 1307.68448 5.19 38.92 4197 4197 MS2 20/36 Linfeng_20130405_rIgG7.raw High IKFEMEQNLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 239 3.20 0.00 1 14 5 3 436.56540 1307.68164 3.02 38.84 4578 4578 MS2 20/36 Linfeng_20130405_rIgG5.raw High FSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 58 3.20 0.00 0 3 9 2 618.27271 1235.53813 7.59 33.19 2513 2513 MS2 21/24 Linfeng_20130405_rIgG3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 3.20 0.00 0 13 3 3 613.32977 1837.97477 5.05 41.64 5637 5637 MS2 25/60 Linfeng_20130405_rIgG5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 220 3.20 0.00 0 45 50 2 616.80603 1232.60478 5.59 34.15 2651 2651 MS2 19/30 Linfeng_20130405_rIgG10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 20 3.20 0.00 0 19 50 3 597.91913 1791.74283 8.39 31.08 2330 2330 MS2 28/88 Linfeng_20130405_rIgG4.raw High IKFEMEQNLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 262 3.19 0.00 1 13 40 3 436.56708 1307.68668 6.87 38.78 4049 4049 MS2 22/36 Linfeng_20130408_Smad2_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 211 3.18 0.00 0 39 50 2 616.80682 1232.60637 6.88 33.83 2379 2379 MS2 19/30 Linfeng_20130408_Smad2_10.raw High IKFEMEQNLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 259 3.16 0.00 1 35 43 3 436.56711 1307.68677 6.94 38.66 4188 4188 MS2 21/36 Linfeng_20130408_Smad2_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 217 3.16 0.00 0 54 50 2 616.80719 1232.60710 7.47 33.95 2793 2793 MS2 16/30 Linfeng_20130408_Smad2_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 183 3.15 0.00 0 57 50 2 616.80695 1232.60661 7.08 33.97 2684 2684 MS2 20/30 Linfeng_20130405_rIgG7.raw High IKFEmEQNLR Unambiguous 1 1 P35527 M5(Oxidation) CID 1.0000 0.0000 1 1 276 3.14 0.00 1 7 8 3 441.89734 1323.67746 3.66 36.38 3530 3530 MS2 23/36 Linfeng_20130405_rIgG2.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 204 3.13 0.00 0 33 42 2 579.29962 1157.59197 0.84 37.32 3773 3773 MS2 16/20 Linfeng_20130408_Smad2_5.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 190 3.12 0.00 0 6 49 2 579.29993 1157.59258 1.37 37.21 3654 3654 MS2 16/20 Linfeng_20130408_Smad2_9.raw High STmQELNSR Unambiguous 1 1 P35527 M3(Oxidation) CID 1.0000 0.0000 1 1 125 3.08 0.00 0 4 48 2 541.25458 1081.50188 7.01 32.14 2363 2363 MS2 14/16 Linfeng_20130405_rIgG2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 213 3.01 0.00 0 26 50 2 616.80811 1232.60893 8.96 34.22 2703 2703 MS2 17/30 Linfeng_20130408_Smad2_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 215 2.99 0.00 0 44 50 2 616.80859 1232.60991 9.75 34.09 2549 2549 MS2 16/30 Linfeng_20130408_Smad2_6.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 214 2.95 0.00 0 0 50 2 579.29919 1157.59111 0.10 37.33 3705 3705 MS2 16/20 Linfeng_20130408_Smad2_4.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 196 2.92 0.00 0 9 17 2 579.29956 1157.59184 0.74 37.52 3515 3515 MS2 15/20 Linfeng_20130408_Smad2_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 60 2.89 0.00 0 48 50 2 618.27301 1235.53874 8.08 33.16 2451 2451 MS2 15/24 Linfeng_20130408_Smad2_1.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 223 2.89 0.00 0 10 50 2 579.30353 1157.59978 7.59 37.75 3423 3423 MS2 17/20 Linfeng_20130408_Smad2_10.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 183 2.88 0.00 0 23 32 2 579.29944 1157.59160 0.53 37.35 3464 3464 MS2 17/20 Linfeng_20130408_Smad2_7.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 194 2.85 0.00 0 13 50 2 579.29932 1157.59136 0.32 37.39 3653 3653 MS2 15/20 Linfeng_20130408_Smad2_3.raw High STmQELNSR Unambiguous 1 1 P35527 M3(Oxidation) CID 1.0000 0.0000 1 1 120 2.85 0.00 0 6 8 2 541.25275 1081.49822 3.62 31.66 2205 2205 MS2 14/16 Linfeng_20130408_Smad2_5.raw High STmQELNSR Unambiguous 1 1 P35527 M3(Oxidation) CID 1.0000 0.0000 1 1 136 2.79 0.00 0 32 50 2 541.25555 1081.50383 8.82 31.24 2002 2002 MS2 13/16 Linfeng_20130408_Smad2_3.raw High STMQELNSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 185 2.78 0.00 0 10 50 2 533.25739 1065.50749 7.61 34.47 2822 2822 MS2 15/16 Linfeng_20130408_Smad2_4.raw High NYSPYYNTIDDLK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 166 2.78 0.00 0 3 50 2 803.38306 1605.75884 9.77 40.56 4626 4626 MS2 17/24 Linfeng_20130408_Smad2_3.raw High NYSPYYNTIDDLK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 142 2.77 0.00 0 0 50 2 803.37817 1605.74907 3.69 40.57 4423 4423 MS2 19/24 Linfeng_20130408_Smad2_7.raw High FSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 59 2.75 0.00 0 28 50 2 618.27271 1235.53813 7.59 33.83 2601 2601 MS2 17/24 Linfeng_20130408_Smad2_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 206 2.73 0.00 0 39 50 2 616.80847 1232.60967 9.55 34.10 2555 2555 MS2 18/30 Linfeng_20130408_Smad2_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 20 2.71 0.00 0 0 50 2 896.37573 1791.74419 9.15 32.00 2094 2094 MS2 20/44 Linfeng_20130408_Smad2_9.raw High FSSSSGYGGGSSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 63 2.70 0.00 0 8 50 2 618.27313 1235.53899 8.28 32.94 2496 2496 MS2 15/24 Linfeng_20130408_Smad2_5.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 196 2.63 0.00 0 13 50 2 579.29950 1157.59172 0.63 37.05 3251 3251 MS2 15/20 Linfeng_20130408_Smad2_10.raw High QGVDADINGLR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 222 2.62 0.00 0 0 20 2 579.29926 1157.59123 0.21 37.47 3738 3738 MS2 15/20 Linfeng_20130408_Smad2_1.raw High STMQELNSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 185 2.61 0.00 0 3 28 2 533.25745 1065.50762 7.73 34.83 2724 2724 MS2 14/16 Linfeng_20130408_Smad2_2.raw High TLLDIDNTR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 329 2.59 0.00 0 33 43 2 530.78809 1060.56890 5.22 39.62 4438 4438 MS2 15/16 Linfeng_20130408_Smad2_9.raw High NYSPYYNTIDDLK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 158 2.59 0.00 0 23 50 2 803.38055 1605.75383 6.65 40.58 4821 4821 MS2 18/24 Linfeng_20130408_Smad2_5.raw High TLLDIDNTR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 346 2.59 0.00 0 12 33 2 530.78711 1060.56694 3.38 39.75 4543 4543 MS2 15/16 Linfeng_20130408_Smad2_5.raw High STMQELNSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 183 2.59 0.00 0 4 16 2 533.25739 1065.50749 7.61 34.72 2850 2850 MS2 15/16 Linfeng_20130408_Smad2_3.raw High STMQELNSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 171 2.58 0.00 0 4 19 2 533.25720 1065.50713 7.27 34.67 2709 2709 MS2 15/16 Linfeng_20130408_Smad2_7.raw High NYSPYYNTIDDLK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 161 2.56 0.00 0 5 50 2 803.38184 1605.75640 8.25 40.65 4456 4456 MS2 18/24 Linfeng_20130408_Smad2_2.raw High STMQELNSR Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 172 2.56 0.00 0 16 50 2 533.25696 1065.50664 6.81 34.21 2479 2479 MS2 15/16 Linfeng_20130408_Smad2_10.raw High NYSPYYNTIDDLK Unambiguous 1 1 P35527 CID 1.0000 0.0000 1 1 147 2.53 0.00 0 13 26 2 803.38074 1605.75420 6.88 40.64 4718 4718 MS2 20/24 Linfeng_20130408_Smad2_1.raw P04264 "Keratin, type II cytoskeletal 1 OS=Homo sapiens GN=KRT1 PE=1 SV=6 - [K2C1_HUMAN]" 61.34 1 38 42 551 1038.27 57.76 35 253 1076.33 57.14 32 298 644 66.0 8.12 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 6.53 0.00 0 1 50 3 795.32935 2383.97348 9.02 33.99 2428 2428 MS2 42/120 Linfeng_20130408_Smad2_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 13 6.42 0.00 0 2 50 3 795.32947 2383.97385 9.18 34.18 2575 2575 MS2 38/120 Linfeng_20130408_Smad2_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 6.32 0.00 0 1 13 3 795.32623 2383.96415 5.11 34.29 3062 3062 MS2 38/120 Linfeng_20130405_rIgG8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 6.29 0.00 0 1 25 3 795.32629 2383.96433 5.18 34.36 2706 2706 MS2 43/120 Linfeng_20130405_rIgG10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 6.20 0.00 0 0 50 3 1104.78406 3312.33762 8.87 34.68 2831 2831 MS2 32/152 Linfeng_20130408_Smad2_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 57 6.10 0.00 0 5 50 2 883.37817 1765.74907 8.07 38.37 3797 3797 MS2 27/38 Linfeng_20130408_Smad2_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 6.05 0.00 0 0 17 3 795.32739 2383.96762 6.57 34.29 2778 2778 MS2 41/120 Linfeng_20130405_rIgG1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 6.04 0.00 0 0 50 3 1104.78406 3312.33762 8.87 34.91 2907 2907 MS2 34/152 Linfeng_20130408_Smad2_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.96 0.00 0 2 50 3 795.32922 2383.97312 8.87 34.14 2818 2818 MS2 37/120 Linfeng_20130408_Smad2_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 3 5.96 0.00 0 0 12 3 1104.78003 3312.32553 5.22 34.93 2872 2872 MS2 35/152 Linfeng_20130405_rIgG10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 54 5.96 0.00 0 8 50 2 883.37708 1765.74687 6.83 38.50 4015 4015 MS2 27/38 Linfeng_20130408_Smad2_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 2 5.95 0.00 0 7 50 3 1104.78186 3312.33103 6.88 34.80 3053 3053 MS2 35/152 Linfeng_20130405_rIgG2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 5 5.94 0.00 0 0 50 3 1104.78284 3312.33396 7.77 34.82 2755 2755 MS2 32/152 Linfeng_20130408_Smad2_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 5.92 0.00 0 5 50 2 883.37836 1765.74944 8.28 38.26 3985 3985 MS2 26/38 Linfeng_20130408_Smad2_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 5.91 0.00 0 0 29 2 883.37512 1765.74297 4.62 38.56 4382 4382 MS2 27/38 Linfeng_20130405_rIgG4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 5.87 0.00 0 2 40 2 883.37518 1765.74309 4.69 38.59 4158 4158 MS2 28/38 Linfeng_20130405_rIgG6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.87 0.00 0 0 22 3 795.32843 2383.97074 7.87 34.28 2773 2773 MS2 42/120 Linfeng_20130405_rIgG7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 5.87 0.00 0 3 14 2 883.37543 1765.74358 4.96 38.56 4150 4150 MS2 27/38 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.87 0.00 0 0 50 2 1192.48987 2383.97246 8.59 33.92 2405 2405 MS2 25/60 Linfeng_20130408_Smad2_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 5.86 0.00 2 4 38 3 834.42633 2501.26444 5.01 39.27 4401 4401 MS2 37/84 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.86 0.00 0 1 50 3 795.32928 2383.97330 8.95 34.18 2577 2577 MS2 36/120 Linfeng_20130408_Smad2_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 57 5.82 0.00 0 11 50 2 883.37872 1765.75017 8.70 38.34 4083 4083 MS2 27/38 Linfeng_20130408_Smad2_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.81 0.00 0 6 50 3 795.32880 2383.97184 8.33 34.04 2820 2820 MS2 43/120 Linfeng_20130408_Smad2_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 5.80 0.00 0 1 8 2 883.37518 1765.74309 4.69 38.61 4487 4487 MS2 28/38 Linfeng_20130405_rIgG5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.76 0.00 0 4 50 3 795.32849 2383.97092 7.95 34.28 3021 3021 MS2 41/120 Linfeng_20130405_rIgG4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 5.73 0.00 0 36 50 2 883.37909 1765.75090 9.11 38.09 3534 3534 MS2 27/38 Linfeng_20130408_Smad2_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 5.73 0.00 1 0 50 4 1075.69397 4299.75405 7.89 34.10 2782 2782 MS2 47/312 Linfeng_20130405_rIgG6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 5.69 0.00 0 11 50 2 883.37524 1765.74321 4.76 38.57 4045 4045 MS2 29/38 Linfeng_20130405_rIgG1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.63 0.00 0 0 50 2 1192.49048 2383.97368 9.11 34.18 2576 2576 MS2 23/60 Linfeng_20130408_Smad2_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 285 5.61 0.00 0 7 1 3 665.33441 1993.98868 6.00 42.42 6004 6004 MS2 30/60 Linfeng_20130405_rIgG8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 42 5.60 0.00 0 8 28 2 883.37543 1765.74358 4.96 38.56 4186 4186 MS2 27/38 Linfeng_20130405_rIgG2.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 283 5.60 0.00 0 10 9 3 665.33344 1993.98575 4.53 42.51 5488 5488 MS2 31/60 Linfeng_20130405_rIgG1.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 5.60 0.00 2 2 37 3 834.42670 2501.26554 5.45 39.26 4312 4312 MS2 39/84 Linfeng_20130405_rIgG7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 5.59 0.00 0 0 50 2 1192.48657 2383.96587 5.83 34.34 2700 2700 MS2 23/60 Linfeng_20130405_rIgG10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 5.54 0.00 0 0 50 2 1192.48999 2383.97270 8.70 34.04 2623 2623 MS2 23/60 Linfeng_20130408_Smad2_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.54 0.00 0 0 50 3 795.32495 2383.96030 3.49 34.32 2970 2970 MS2 35/120 Linfeng_20130405_rIgG9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 5.54 0.00 0 2 50 2 1192.48914 2383.97099 7.98 34.22 2872 2872 MS2 21/60 Linfeng_20130405_rIgG2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.53 0.00 0 31 50 2 1192.48682 2383.96636 6.03 34.23 3095 3095 MS2 21/60 Linfeng_20130405_rIgG5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 7 5.52 0.00 0 0 50 2 1192.48657 2383.96587 5.83 34.26 2768 2768 MS2 23/60 Linfeng_20130405_rIgG1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 5.52 0.00 0 0 50 2 883.37543 1765.74358 4.96 38.59 4087 4087 MS2 27/38 Linfeng_20130405_rIgG7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.48 0.00 0 1 44 2 1192.48853 2383.96977 7.47 34.27 3020 3020 MS2 21/60 Linfeng_20130405_rIgG4.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 282 5.47 0.00 0 27 6 3 665.33301 1993.98447 3.89 42.44 5586 5586 MS2 31/60 Linfeng_20130405_rIgG3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 5.45 0.00 0 6 50 2 883.37897 1765.75066 8.97 38.44 3941 3941 MS2 26/38 Linfeng_20130408_Smad2_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 5.45 0.00 0 3 50 3 795.32758 2383.96817 6.80 34.24 2878 2878 MS2 40/120 Linfeng_20130405_rIgG2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.44 0.00 0 0 50 3 795.32813 2383.96982 7.49 34.25 2808 2808 MS2 38/120 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.44 0.00 0 10 50 3 795.32928 2383.97330 8.95 34.02 2620 2620 MS2 41/120 Linfeng_20130408_Smad2_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 5.43 0.00 0 0 50 2 883.37848 1765.74968 8.42 38.51 3777 3777 MS2 28/38 Linfeng_20130408_Smad2_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 5.43 0.00 0 8 50 2 883.37970 1765.75212 9.80 38.36 4011 4011 MS2 26/38 Linfeng_20130408_Smad2_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 2 5.42 0.00 0 0 30 3 1104.78235 3312.33249 7.32 34.89 3012 3012 MS2 34/152 Linfeng_20130405_rIgG6.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 281 5.40 0.00 0 13 3 3 665.33221 1993.98209 2.70 42.34 5542 5542 MS2 31/60 Linfeng_20130408_Smad2_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 2 5.39 0.00 0 1 39 3 1104.78174 3312.33066 6.77 34.91 3163 3163 MS2 41/152 Linfeng_20130405_rIgG9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 5.37 0.00 0 7 50 4 828.84021 3312.33901 9.29 34.79 2753 2753 MS2 57/228 Linfeng_20130408_Smad2_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 5.34 0.00 0 0 50 2 1192.48987 2383.97246 8.59 34.04 2819 2819 MS2 22/60 Linfeng_20130408_Smad2_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 5.33 0.00 0 0 50 2 1192.48999 2383.97270 8.70 34.28 2764 2764 MS2 24/60 Linfeng_20130408_Smad2_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.32 0.00 0 0 7 3 795.32336 2383.95554 1.50 34.28 3109 3109 MS2 36/120 Linfeng_20130405_rIgG5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 3 5.32 0.00 0 0 50 3 1104.78113 3312.32883 6.22 34.86 3208 3208 MS2 29/152 Linfeng_20130405_rIgG4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 5.31 0.00 0 2 50 2 883.37482 1765.74236 4.27 38.62 3959 3959 MS2 27/38 Linfeng_20130405_rIgG10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 54 5.27 0.00 0 7 50 2 883.37799 1765.74870 7.87 38.27 4105 4105 MS2 28/38 Linfeng_20130408_Smad2_8.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 280 5.27 0.00 0 13 4 3 665.33472 1993.98960 6.46 42.42 5959 5959 MS2 31/60 Linfeng_20130405_rIgG5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 4 5.26 0.00 0 1 7 3 1104.78320 3312.33506 8.10 34.86 3000 3000 MS2 34/152 Linfeng_20130405_rIgG3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 5.25 0.00 0 11 22 2 883.37494 1765.74260 4.41 38.63 4389 4389 MS2 27/38 Linfeng_20130405_rIgG9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 5.21 0.00 0 0 21 2 1192.48499 2383.96269 4.50 34.27 3052 3052 MS2 20/60 Linfeng_20130405_rIgG8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 5.19 0.00 0 0 50 2 1192.48840 2383.96953 7.37 34.22 2801 2801 MS2 20/60 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 5.13 0.00 0 1 50 3 795.32837 2383.97055 7.79 34.29 2833 2833 MS2 39/120 Linfeng_20130405_rIgG6.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 288 5.13 0.00 0 7 3 3 665.33362 1993.98630 4.81 42.46 5828 5828 MS2 31/60 Linfeng_20130405_rIgG9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 5.13 0.00 0 0 50 3 1104.78516 3312.34092 9.87 34.76 2909 2909 MS2 35/152 Linfeng_20130408_Smad2_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 5.10 0.00 0 9 27 2 883.37500 1765.74272 4.48 38.55 4479 4479 MS2 28/38 Linfeng_20130405_rIgG8.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 248 5.09 0.00 2 0 50 3 834.42584 2501.26297 4.42 39.15 4389 4389 MS2 39/84 Linfeng_20130405_rIgG2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 5.07 0.00 0 2 50 2 883.37952 1765.75176 9.59 38.39 3734 3734 MS2 26/38 Linfeng_20130408_Smad2_7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 4.96 0.00 0 0 41 2 1192.48840 2383.96953 7.37 34.26 2767 2767 MS2 22/60 Linfeng_20130405_rIgG7.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 4.96 0.00 0 2 50 3 795.32904 2383.97257 8.64 34.33 2584 2584 MS2 39/120 Linfeng_20130408_Smad2_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 209 4.95 0.00 2 0 44 2 1251.13574 2501.26421 4.92 39.22 4413 4413 MS2 22/42 Linfeng_20130405_rIgG2.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 280 4.90 0.00 0 4 1 3 665.33423 1993.98813 5.73 42.52 5855 5855 MS2 29/60 Linfeng_20130405_rIgG4.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 281 4.87 0.00 0 6 1 3 665.33313 1993.98484 4.07 42.47 5613 5613 MS2 30/60 Linfeng_20130405_rIgG2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 4.78 0.00 1 0 18 3 762.71667 2286.13547 4.62 40.03 4651 4651 MS2 33/76 Linfeng_20130405_rIgG6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 4.77 0.00 0 0 39 2 1192.48865 2383.97002 7.57 34.29 2832 2832 MS2 22/60 Linfeng_20130405_rIgG6.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 277 4.73 0.00 0 23 8 3 665.33234 1993.98246 2.88 42.42 5393 5393 MS2 30/60 Linfeng_20130408_Smad2_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 5 4.73 0.00 0 1 37 3 1104.78333 3312.33542 8.21 34.87 2936 2936 MS2 31/152 Linfeng_20130408_Smad2_1.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 245 4.67 0.00 0 6 0 2 651.86426 1302.72124 4.64 42.56 5652 5652 MS2 19/22 Linfeng_20130405_rIgG2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 178 4.67 0.00 0 0 16 2 829.40375 1657.80022 4.39 39.16 4716 4716 MS2 23/32 Linfeng_20130405_rIgG8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 4.62 0.00 0 0 50 3 1104.78455 3312.33908 9.31 34.89 2743 2743 MS2 30/152 Linfeng_20130408_Smad2_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 4.62 0.00 1 24 5 3 533.95203 1599.84153 4.86 40.88 4861 4861 MS2 29/52 Linfeng_20130405_rIgG7.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 143 4.62 0.00 0 11 1 2 639.36218 1277.71709 5.52 42.00 5419 5419 MS2 18/20 Linfeng_20130405_rIgG2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 197 4.60 0.00 1 0 35 2 1143.57263 2286.13799 5.72 40.07 4688 4688 MS2 22/38 Linfeng_20130405_rIgG2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 4.57 0.00 0 0 15 2 829.40381 1657.80034 4.46 39.14 4385 4385 MS2 23/32 Linfeng_20130405_rIgG2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 2 4.55 0.00 0 1 3 3 1104.78149 3312.32993 6.55 34.93 2972 2972 MS2 31/152 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 4.51 0.00 1 19 1 3 533.95178 1599.84079 4.40 40.86 4960 4960 MS2 30/52 Linfeng_20130405_rIgG2.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 280 4.50 0.00 0 5 5 3 665.33447 1993.98886 6.10 42.52 5602 5602 MS2 31/60 Linfeng_20130405_rIgG6.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 217 4.50 0.00 0 7 0 2 651.86493 1302.72258 5.67 42.58 5881 5881 MS2 19/22 Linfeng_20130405_rIgG4.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 241 4.49 0.00 0 14 0 2 651.86407 1302.72087 4.36 42.44 5431 5431 MS2 19/22 Linfeng_20130408_Smad2_9.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 220 4.49 0.00 0 21 1 2 651.86487 1302.72246 5.58 42.56 5866 5866 MS2 19/22 Linfeng_20130405_rIgG9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 188 4.48 0.00 0 4 50 2 829.40674 1657.80620 8.00 39.04 4131 4131 MS2 21/32 Linfeng_20130408_Smad2_3.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 268 4.47 0.00 0 3 1 2 679.35461 1357.70195 4.49 40.69 5120 5120 MS2 20/22 Linfeng_20130405_rIgG4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 4.47 0.00 1 8 14 3 533.95221 1599.84208 5.20 40.79 4770 4770 MS2 31/52 Linfeng_20130408_Smad2_1.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 245 4.47 0.00 0 3 9 2 679.35541 1357.70354 5.66 40.56 4691 4691 MS2 20/22 Linfeng_20130408_Smad2_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 7 4.47 0.00 0 0 14 2 1192.48486 2383.96245 4.40 34.34 2977 2977 MS2 21/60 Linfeng_20130405_rIgG9.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 265 4.47 0.00 0 7 50 2 679.35718 1357.70708 8.27 40.45 4452 4452 MS2 20/22 Linfeng_20130408_Smad2_6.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 212 4.46 0.00 1 9 15 3 783.74774 2349.22867 4.33 43.15 5887 5887 MS2 35/80 Linfeng_20130405_rIgG2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 190 4.46 0.00 0 3 50 2 829.40643 1657.80559 7.63 38.98 3925 3925 MS2 21/32 Linfeng_20130408_Smad2_7.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 271 4.45 0.00 0 2 2 2 679.35437 1357.70146 4.13 40.63 4878 4878 MS2 20/22 Linfeng_20130405_rIgG2.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 235 4.45 0.00 0 12 1 2 651.86377 1302.72026 3.89 42.40 5567 5567 MS2 19/22 Linfeng_20130408_Smad2_8.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 242 4.44 0.00 0 20 0 2 651.86407 1302.72087 4.36 42.56 5528 5528 MS2 19/22 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 253 4.44 0.00 1 9 20 3 533.95453 1599.84903 9.55 40.75 4546 4546 MS2 30/52 Linfeng_20130408_Smad2_6.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 215 4.43 0.00 0 11 0 2 651.86523 1302.72319 6.14 42.56 6014 6014 MS2 19/22 Linfeng_20130405_rIgG5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 4.43 0.00 0 19 50 2 829.40747 1657.80766 8.88 38.84 4293 4293 MS2 21/32 Linfeng_20130408_Smad2_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 183 4.42 0.00 0 0 16 2 829.40369 1657.80010 4.32 39.11 4680 4680 MS2 23/32 Linfeng_20130405_rIgG5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 247 4.41 0.00 0 4 50 2 738.40082 1475.79436 6.12 37.95 3953 3953 MS2 20/22 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 259 4.41 0.00 0 2 33 2 738.40228 1475.79729 8.11 37.82 3840 3840 MS2 20/22 Linfeng_20130408_Smad2_9.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 4.41 0.00 0 12 1 2 651.86237 1302.71745 1.74 42.57 6067 6067 MS2 19/22 Linfeng_20130405_rIgG8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 243 4.40 0.00 0 1 13 2 738.39978 1475.79228 4.72 38.18 3947 3947 MS2 20/22 Linfeng_20130405_rIgG7.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 242 4.40 0.00 0 17 1 2 651.86438 1302.72148 4.83 42.52 5618 5618 MS2 19/22 Linfeng_20130405_rIgG3.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 235 4.39 0.00 0 24 2 2 651.86383 1302.72038 3.99 42.42 5071 5071 MS2 19/22 Linfeng_20130408_Smad2_7.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.39 0.00 0 31 50 2 738.40118 1475.79509 6.62 38.14 3658 3658 MS2 20/22 Linfeng_20130408_Smad2_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 4.39 0.00 1 3 10 3 762.71692 2286.13620 4.94 40.01 4645 4645 MS2 35/76 Linfeng_20130405_rIgG3.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 241 4.38 0.00 0 14 1 2 651.86353 1302.71977 3.52 42.60 5406 5406 MS2 19/22 Linfeng_20130405_rIgG10.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 177 4.38 0.00 1 9 2 3 978.18311 2932.53476 6.25 41.79 5332 5332 MS2 32/92 Linfeng_20130405_rIgG2.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 230 4.38 0.00 0 16 4 2 997.49731 1993.98735 5.34 42.45 6017 6017 MS2 22/30 Linfeng_20130405_rIgG8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 10 4.38 0.00 0 0 50 2 1192.49060 2383.97392 9.21 34.16 2570 2570 MS2 17/60 Linfeng_20130408_Smad2_6.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 265 4.38 0.00 0 6 13 2 679.35480 1357.70232 4.76 40.45 4777 4777 MS2 20/22 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 255 4.37 0.00 0 0 37 2 738.39929 1475.79131 4.06 38.18 4018 4018 MS2 19/22 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 4.37 0.00 0 0 50 2 1192.49097 2383.97466 9.52 34.19 2693 2693 MS2 21/60 Linfeng_20130408_Smad2_3.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 147 4.37 0.00 0 10 3 2 639.36267 1277.71807 6.29 42.02 5837 5837 MS2 18/20 Linfeng_20130405_rIgG8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 253 4.37 0.00 0 2 37 2 738.40173 1475.79619 7.36 38.05 3810 3810 MS2 20/22 Linfeng_20130408_Smad2_3.raw High SGYRSGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 242 4.37 0.00 1 9 50 3 707.67853 2121.02103 4.78 38.40 4097 4097 MS2 30/80 Linfeng_20130405_rIgG3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.36 0.00 0 2 27 2 738.39929 1475.79131 4.06 38.24 3824 3824 MS2 20/22 Linfeng_20130405_rIgG10.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 258 4.35 0.00 0 4 2 2 679.35406 1357.70085 3.68 40.63 4859 4859 MS2 20/22 Linfeng_20130405_rIgG3.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 239 4.35 0.00 1 7 2 3 533.95245 1599.84281 5.66 40.85 5358 5358 MS2 32/52 Linfeng_20130405_rIgG8.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 241 4.34 0.00 0 5 2 2 679.35394 1357.70061 3.50 40.67 4781 4781 MS2 20/22 Linfeng_20130405_rIgG7.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 232 4.33 0.00 0 26 1 2 651.86371 1302.72014 3.80 42.34 4963 4963 MS2 19/22 Linfeng_20130408_Smad2_10.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 4.33 0.00 0 3 2 2 679.35400 1357.70073 3.59 40.66 4752 4752 MS2 20/22 Linfeng_20130405_rIgG1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 182 4.32 0.00 0 7 50 2 829.40369 1657.80010 4.32 39.15 4351 4351 MS2 23/32 Linfeng_20130405_rIgG6.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 277 4.32 0.00 0 6 34 2 679.35663 1357.70598 7.46 40.57 4429 4429 MS2 20/22 Linfeng_20130408_Smad2_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 4.31 0.00 0 6 17 2 829.40381 1657.80034 4.46 39.18 4369 4369 MS2 21/32 Linfeng_20130405_rIgG3.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 266 4.31 0.00 0 9 16 2 679.35291 1357.69853 1.98 40.34 4788 4788 MS2 20/22 Linfeng_20130408_Smad2_8.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 226 4.31 0.00 1 5 29 3 762.71667 2286.13547 4.62 40.01 4558 4558 MS2 30/76 Linfeng_20130405_rIgG7.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 214 4.31 0.00 0 4 0 2 651.86572 1302.72417 6.89 42.57 5508 5508 MS2 19/22 Linfeng_20130405_rIgG1.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 255 4.29 0.00 0 9 50 2 738.39960 1475.79192 4.47 38.18 4014 4014 MS2 20/22 Linfeng_20130405_rIgG6.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 4.29 0.00 1 24 5 3 533.95270 1599.84354 6.12 40.89 4834 4834 MS2 31/52 Linfeng_20130405_rIgG1.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 266 4.29 0.00 0 9 28 2 679.35492 1357.70256 4.94 40.18 4194 4194 MS2 20/22 Linfeng_20130408_Smad2_10.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 183 4.28 0.00 0 32 50 2 829.40552 1657.80376 6.53 39.08 4208 4208 MS2 22/32 Linfeng_20130408_Smad2_1.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 150 4.28 0.00 0 14 17 2 639.36432 1277.72136 8.87 41.96 5117 5117 MS2 18/20 Linfeng_20130408_Smad2_3.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 147 4.28 0.00 0 48 20 2 639.36133 1277.71538 4.19 41.84 5215 5215 MS2 18/20 Linfeng_20130408_Smad2_9.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 273 4.27 0.00 0 20 11 2 679.35461 1357.70195 4.49 40.60 5234 5234 MS2 20/22 Linfeng_20130405_rIgG5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 4.26 0.00 0 5 9 2 738.39960 1475.79192 4.47 38.20 4227 4227 MS2 20/22 Linfeng_20130405_rIgG9.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 243 4.26 0.00 0 6 3 2 679.35376 1357.70024 3.23 40.60 5259 5259 MS2 20/22 Linfeng_20130405_rIgG8.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 260 4.26 0.00 0 8 11 2 679.35419 1357.70110 3.86 40.66 5120 5120 MS2 20/22 Linfeng_20130405_rIgG9.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 4.26 0.00 0 18 50 2 679.35547 1357.70366 5.75 40.47 4597 4597 MS2 20/22 Linfeng_20130408_Smad2_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 254 4.24 0.00 1 14 16 3 533.95300 1599.84446 6.69 40.77 4489 4489 MS2 30/52 Linfeng_20130408_Smad2_7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 194 4.24 0.00 0 16 50 2 829.40625 1657.80522 7.41 39.12 3971 3971 MS2 21/32 Linfeng_20130408_Smad2_2.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 264 4.24 0.00 0 7 15 2 679.35437 1357.70146 4.13 40.64 4863 4863 MS2 20/22 Linfeng_20130405_rIgG6.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 248 4.23 0.00 0 2 5 3 572.95667 1716.85544 2.48 39.37 4426 4426 MS2 30/56 Linfeng_20130405_rIgG6.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 4.23 0.00 0 9 1 2 651.86462 1302.72197 5.20 42.45 5532 5532 MS2 19/22 Linfeng_20130408_Smad2_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 3 4.22 0.00 0 0 14 3 1104.77930 3312.32334 4.56 34.90 2951 2951 MS2 28/152 Linfeng_20130405_rIgG1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 4.22 0.00 1 7 16 3 762.71606 2286.13364 3.82 40.07 4452 4452 MS2 33/76 Linfeng_20130405_rIgG10.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 246 4.22 0.00 0 0 7 2 738.39941 1475.79155 4.22 38.17 4314 4314 MS2 20/22 Linfeng_20130405_rIgG5.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 213 4.21 0.00 0 9 8 2 997.49689 1993.98650 4.91 42.49 5622 5622 MS2 21/30 Linfeng_20130405_rIgG2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 4.21 0.00 0 10 17 2 738.40125 1475.79521 6.70 37.82 3961 3961 MS2 20/22 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 267 4.21 0.00 0 1 12 2 738.40027 1475.79326 5.38 38.19 4256 4256 MS2 20/22 Linfeng_20130405_rIgG4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 4.21 0.00 1 24 2 3 533.95197 1599.84134 4.75 40.86 4947 4947 MS2 30/52 Linfeng_20130405_rIgG3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 185 4.21 0.00 0 8 50 2 829.40814 1657.80901 9.69 38.97 4290 4290 MS2 21/32 Linfeng_20130408_Smad2_5.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 4.20 0.00 0 31 3 2 651.86499 1302.72270 5.77 42.56 5615 5615 MS2 19/22 Linfeng_20130405_rIgG6.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 4.20 0.00 1 8 10 2 800.42542 1599.84355 6.13 40.89 4835 4835 MS2 22/26 Linfeng_20130405_rIgG1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 189 4.20 0.00 0 9 26 2 829.40259 1657.79790 2.99 39.22 4165 4165 MS2 22/32 Linfeng_20130405_rIgG10.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 144 4.20 0.00 0 16 3 2 639.36102 1277.71477 3.71 41.89 4952 4952 MS2 18/20 Linfeng_20130408_Smad2_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 12 4.19 0.00 0 10 50 3 795.32916 2383.97293 8.79 34.28 2763 2763 MS2 28/120 Linfeng_20130408_Smad2_1.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 143 4.19 0.00 0 40 5 2 639.36121 1277.71514 3.99 41.89 5184 5184 MS2 18/20 Linfeng_20130408_Smad2_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 181 4.16 0.00 0 5 50 2 829.40552 1657.80376 6.53 38.86 4185 4185 MS2 23/32 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 239 4.14 0.00 0 4 50 2 738.40125 1475.79521 6.70 37.67 3397 3397 MS2 20/22 Linfeng_20130408_Smad2_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 268 4.14 0.00 0 8 50 3 572.96039 1716.86661 8.99 39.20 4055 4055 MS2 32/56 Linfeng_20130408_Smad2_6.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 253 4.13 0.00 0 5 21 2 679.35510 1357.70293 5.21 40.34 4682 4682 MS2 20/22 Linfeng_20130408_Smad2_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 55 4.12 0.00 0 29 50 2 883.37933 1765.75139 9.39 39.53 4161 4161 MS2 25/38 Linfeng_20130408_Smad2_6.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 259 4.12 0.00 0 10 31 2 651.86267 1302.71807 2.21 41.67 5100 5100 MS2 19/22 Linfeng_20130408_Smad2_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 278 4.12 0.00 1 9 12 3 615.65533 1844.95145 2.87 37.73 3902 3902 MS2 29/60 Linfeng_20130405_rIgG3.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 203 4.11 0.00 1 11 50 2 800.42725 1599.84722 8.42 40.82 4509 4509 MS2 22/26 Linfeng_20130408_Smad2_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 11 4.10 0.00 0 0 50 2 1192.49036 2383.97344 9.00 34.30 2577 2577 MS2 20/60 Linfeng_20130408_Smad2_2.raw High SLNNQFASFIDKVR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 225 4.10 0.00 1 6 43 2 819.93768 1638.86809 5.00 41.63 4857 4857 MS2 18/26 Linfeng_20130408_Smad2_6.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 136 4.10 0.00 0 12 3 2 639.36194 1277.71660 5.14 41.99 5777 5777 MS2 18/20 Linfeng_20130405_rIgG5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.10 0.00 0 3 46 2 738.40125 1475.79521 6.70 38.11 3886 3886 MS2 20/22 Linfeng_20130408_Smad2_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 4.10 0.00 0 6 25 2 829.40356 1657.79985 4.17 39.21 4256 4256 MS2 21/32 Linfeng_20130405_rIgG1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 4.09 0.00 2 38 4 3 728.71741 2184.13767 5.52 42.05 5440 5440 MS2 25/72 Linfeng_20130405_rIgG2.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 234 4.09 0.00 1 13 6 3 533.95148 1599.83988 3.83 40.71 4867 4867 MS2 30/52 Linfeng_20130408_Smad2_5.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 136 4.08 0.00 0 4 1 2 639.36206 1277.71684 5.33 42.02 5410 5410 MS2 18/20 Linfeng_20130405_rIgG3.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 135 4.08 0.00 0 19 10 2 639.36212 1277.71697 5.43 41.98 4912 4912 MS2 18/20 Linfeng_20130408_Smad2_2.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 135 4.08 0.00 0 36 8 2 639.36200 1277.71672 5.24 42.04 5657 5657 MS2 18/20 Linfeng_20130405_rIgG4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 234 4.08 0.00 1 33 50 2 800.42615 1599.84502 7.04 40.72 4537 4537 MS2 22/26 Linfeng_20130408_Smad2_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 4.08 0.00 1 31 3 3 533.95203 1599.84153 4.86 40.90 5200 5200 MS2 30/52 Linfeng_20130405_rIgG4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 222 4.07 0.00 1 8 10 2 800.42450 1599.84172 4.98 40.89 4864 4864 MS2 22/26 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 215 4.07 0.00 1 28 24 2 800.42352 1599.83977 3.76 40.73 4873 4873 MS2 21/26 Linfeng_20130408_Smad2_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 4.07 0.00 1 22 19 3 533.95288 1599.84409 6.46 40.71 4769 4769 MS2 30/52 Linfeng_20130408_Smad2_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 222 4.06 0.00 0 4 14 2 997.49542 1993.98357 3.44 42.48 5602 5602 MS2 21/30 Linfeng_20130405_rIgG3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 4.05 0.00 1 6 8 3 762.71637 2286.13456 4.22 39.99 4662 4662 MS2 34/76 Linfeng_20130405_rIgG2.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 254 4.05 0.00 1 16 50 3 533.95435 1599.84848 9.21 40.74 4685 4685 MS2 30/52 Linfeng_20130408_Smad2_3.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 255 4.03 0.00 0 4 2 2 738.38196 1475.75664 5.22 41.52 5041 5041 MS2 20/22 Linfeng_20130408_Smad2_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 4.01 0.00 1 26 10 3 533.95209 1599.84171 4.97 40.63 4887 4887 MS2 29/52 Linfeng_20130408_Smad2_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 235 4.01 0.00 1 13 50 2 800.42603 1599.84477 6.89 40.72 4771 4771 MS2 22/26 Linfeng_20130408_Smad2_4.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 272 3.99 0.00 0 29 50 2 738.39746 1475.78765 1.57 37.90 3650 3650 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 3.99 0.00 0 11 10 2 692.34937 1383.69145 0.79 41.38 5041 5041 MS2 19/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 3.98 0.00 0 5 32 2 738.39929 1475.79131 4.06 38.21 3917 3917 MS2 20/22 Linfeng_20130405_rIgG1.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 226 3.98 0.00 1 10 32 2 800.42529 1599.84331 5.97 40.80 4773 4773 MS2 22/26 Linfeng_20130408_Smad2_1.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 246 3.97 0.00 0 2 23 2 738.39941 1475.79155 4.22 38.14 4327 4327 MS2 20/22 Linfeng_20130405_rIgG8.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 245 3.95 0.00 0 5 5 3 572.95782 1716.85892 4.51 39.27 4431 4431 MS2 34/56 Linfeng_20130405_rIgG2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 6 3.95 0.00 0 0 50 3 1104.78406 3312.33762 8.87 34.49 2562 2562 MS2 34/152 Linfeng_20130408_Smad2_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 254 3.94 0.00 0 11 13 3 572.95752 1716.85801 3.97 39.29 4285 4285 MS2 30/56 Linfeng_20130405_rIgG1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 65 3.94 0.00 1 20 45 2 844.49304 1687.97881 5.10 40.32 4753 4753 MS2 22/32 Linfeng_20130405_rIgG3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 P04264 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.94 0.00 0 0 50 2 883.37415 1765.74101 3.51 39.65 4410 4410 MS2 21/38 Linfeng_20130405_rIgG1.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 232 3.92 0.00 0 8 1 2 738.38190 1475.75652 5.13 41.58 5229 5229 MS2 20/22 Linfeng_20130405_rIgG3.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 3.92 0.00 1 3 10 2 800.42419 1599.84111 4.60 40.87 4949 4949 MS2 22/26 Linfeng_20130405_rIgG3.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 3.92 0.00 0 9 2 2 738.38141 1475.75554 4.47 41.61 5482 5482 MS2 20/22 Linfeng_20130405_rIgG4.raw High NSKIEISELNR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 326 3.92 0.00 1 10 5 3 434.90723 1302.70713 4.50 37.09 3764 3764 MS2 27/40 Linfeng_20130405_rIgG2.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 238 3.92 0.00 0 13 8 2 738.38147 1475.75566 4.55 41.45 4720 4720 MS2 20/22 Linfeng_20130408_Smad2_7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 3.91 0.00 0 2 20 2 829.40424 1657.80120 4.98 39.16 4277 4277 MS2 22/32 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 3.90 0.00 1 35 15 3 533.95203 1599.84153 4.86 40.89 5206 5206 MS2 29/52 Linfeng_20130405_rIgG9.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 239 3.90 0.00 0 6 1 2 738.38184 1475.75640 5.05 41.60 5138 5138 MS2 20/22 Linfeng_20130405_rIgG7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 181 3.90 0.00 0 0 50 2 829.40338 1657.79949 3.95 39.20 4598 4598 MS2 21/32 Linfeng_20130405_rIgG4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.89 0.00 1 31 43 2 800.42456 1599.84184 5.06 40.64 4894 4894 MS2 22/26 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 3.89 0.00 0 31 50 2 738.40302 1475.79875 9.10 40.49 4465 4465 MS2 18/22 Linfeng_20130408_Smad2_6.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 149 3.89 0.00 0 29 7 2 639.36072 1277.71416 3.23 42.00 5225 5225 MS2 18/20 Linfeng_20130408_Smad2_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 115 3.89 0.00 0 9 24 3 861.06409 2581.17771 6.16 36.95 3586 3586 MS2 27/100 Linfeng_20130408_Smad2_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 218 3.88 0.00 0 1 50 2 858.93732 1716.86736 9.42 39.14 4261 4261 MS2 21/28 Linfeng_20130408_Smad2_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.87 0.00 1 15 15 2 800.42462 1599.84197 5.14 40.91 5203 5203 MS2 22/26 Linfeng_20130405_rIgG4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 102 3.86 0.00 0 12 20 3 861.06171 2581.17057 3.39 36.94 3912 3912 MS2 25/100 Linfeng_20130405_rIgG5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 250 3.86 0.00 0 43 16 2 738.39990 1475.79253 4.88 40.72 4913 4913 MS2 18/22 Linfeng_20130405_rIgG2.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 135 3.85 0.00 0 20 3 2 639.36127 1277.71526 4.09 41.75 4743 4743 MS2 18/20 Linfeng_20130408_Smad2_10.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 238 3.85 0.00 1 7 50 2 670.84338 1340.67949 7.62 34.03 2689 2689 MS2 19/22 Linfeng_20130408_Smad2_1.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 231 3.85 0.00 1 3 50 2 670.84314 1340.67900 7.25 34.07 2754 2754 MS2 19/22 Linfeng_20130405_rIgG3.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 281 3.85 0.00 1 11 11 3 615.65521 1844.95108 2.67 37.72 3934 3934 MS2 30/60 Linfeng_20130405_rIgG2.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.84 0.00 0 11 1 2 738.38165 1475.75603 4.80 41.59 5107 5107 MS2 20/22 Linfeng_20130405_rIgG1.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 215 3.84 0.00 0 28 31 2 738.37866 1475.75005 0.75 41.38 5043 5043 MS2 20/22 Linfeng_20130408_Smad2_9.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 147 3.84 0.00 0 43 7 2 639.36188 1277.71648 5.05 41.92 4889 4889 MS2 18/20 Linfeng_20130408_Smad2_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.84 0.00 1 13 50 2 800.42590 1599.84453 6.74 40.78 4492 4492 MS2 22/26 Linfeng_20130408_Smad2_7.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 226 3.82 0.00 0 5 3 2 590.30682 1179.60637 5.00 38.61 4093 4093 MS2 17/18 Linfeng_20130405_rIgG7.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 224 3.82 0.00 0 4 5 2 590.30859 1179.60991 8.00 38.49 3957 3957 MS2 17/18 Linfeng_20130408_Smad2_3.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 3.81 0.00 0 17 21 2 738.38165 1475.75603 4.80 41.44 4784 4784 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 191 3.81 0.00 0 30 41 2 829.40332 1657.79936 3.87 39.22 4597 4597 MS2 20/32 Linfeng_20130405_rIgG9.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 3.80 0.00 0 4 9 2 997.49847 1993.98967 6.50 42.53 5860 5860 MS2 23/30 Linfeng_20130405_rIgG4.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 252 3.80 0.00 0 18 50 2 738.39880 1475.79033 3.39 38.17 4051 4051 MS2 20/22 Linfeng_20130405_rIgG2.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 260 3.80 0.00 0 26 14 2 738.38208 1475.75688 5.38 41.39 5170 5170 MS2 20/22 Linfeng_20130408_Smad2_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 225 3.80 0.00 1 7 7 2 800.42401 1599.84075 4.37 40.86 4962 4962 MS2 22/26 Linfeng_20130405_rIgG2.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 P04264 M11(Oxidation) CID 1.0000 0.0000 1 1 116 3.79 0.00 1 24 35 3 667.97211 2001.90177 6.22 40.18 4613 4613 MS2 27/60 Linfeng_20130405_rIgG7.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.79 0.00 0 6 50 2 738.39850 1475.78972 2.98 37.90 3863 3863 MS2 17/22 Linfeng_20130408_Smad2_4.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 305 3.78 0.00 0 50 50 2 679.35681 1357.70635 7.73 40.40 4666 4666 MS2 19/22 Linfeng_20130408_Smad2_4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 225 3.78 0.00 0 4 15 2 590.30872 1179.61016 8.21 38.42 3746 3746 MS2 17/18 Linfeng_20130408_Smad2_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 262 3.77 0.00 0 15 50 3 572.96014 1716.86588 8.56 39.17 4271 4271 MS2 30/56 Linfeng_20130408_Smad2_4.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 221 3.77 0.00 0 4 4 2 692.35187 1383.69646 4.41 41.38 5165 5165 MS2 18/22 Linfeng_20130408_Smad2_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 255 3.77 0.00 0 7 11 3 572.95752 1716.85801 3.97 39.27 4270 4270 MS2 28/56 Linfeng_20130408_Smad2_1.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 249 3.77 0.00 0 16 1 2 738.38196 1475.75664 5.22 41.58 5654 5654 MS2 20/22 Linfeng_20130405_rIgG8.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 156 3.77 0.00 0 30 14 2 639.36194 1277.71660 5.14 42.07 5667 5667 MS2 18/20 Linfeng_20130405_rIgG9.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 249 3.76 0.00 0 4 12 2 590.30817 1179.60906 7.28 38.53 4027 4027 MS2 17/18 Linfeng_20130408_Smad2_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 282 3.76 0.00 1 21 50 3 615.65601 1844.95346 3.96 37.66 3533 3533 MS2 25/60 Linfeng_20130408_Smad2_7.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 242 3.76 0.00 0 4 0 2 738.38232 1475.75737 5.71 41.59 5249 5249 MS2 19/22 Linfeng_20130405_rIgG2.raw High THNLEPYFESFINNLR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 238 3.76 0.00 0 2 20 2 997.49829 1993.98931 6.32 42.58 5514 5514 MS2 19/30 Linfeng_20130405_rIgG1.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 3.76 0.00 0 4 1 2 738.38165 1475.75603 4.80 41.57 5607 5607 MS2 20/22 Linfeng_20130405_rIgG5.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 3.76 0.00 1 10 38 3 508.60373 1523.79663 5.21 39.62 4321 4321 MS2 23/44 Linfeng_20130408_Smad2_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 179 3.75 0.00 0 19 50 2 829.40680 1657.80632 8.07 38.71 3729 3729 MS2 22/32 Linfeng_20130408_Smad2_10.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 3.75 0.00 0 4 4 2 692.35022 1383.69316 2.02 41.48 5027 5027 MS2 19/22 Linfeng_20130408_Smad2_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 118 3.75 0.00 0 18 50 3 861.06500 2581.18045 7.22 36.99 3363 3363 MS2 27/100 Linfeng_20130408_Smad2_2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 227 3.75 0.00 0 5 18 2 590.30884 1179.61040 8.42 38.40 4023 4023 MS2 17/18 Linfeng_20130408_Smad2_4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 236 3.75 0.00 0 4 25 2 590.30829 1179.60930 7.48 38.24 3977 3977 MS2 17/18 Linfeng_20130408_Smad2_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 3.74 0.00 0 7 20 3 572.95782 1716.85892 4.51 39.07 4370 4370 MS2 26/56 Linfeng_20130408_Smad2_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 199 3.74 0.00 0 3 28 2 858.93304 1716.85881 4.44 39.30 4288 4288 MS2 20/28 Linfeng_20130405_rIgG1.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 124 3.72 0.00 0 0 36 3 855.73163 2565.18033 5.23 37.38 3814 3814 MS2 33/100 Linfeng_20130405_rIgG3.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 132 3.72 0.00 0 13 2 2 639.36200 1277.71672 5.24 42.04 5290 5290 MS2 18/20 Linfeng_20130405_rIgG1.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 227 3.71 0.00 0 10 23 2 590.30823 1179.60918 7.38 38.38 4096 4096 MS2 17/18 Linfeng_20130408_Smad2_5.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 3.71 0.00 0 4 2 2 692.35150 1383.69573 3.88 41.43 5013 5013 MS2 18/22 Linfeng_20130408_Smad2_4.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 208 3.71 0.00 1 24 8 3 508.60291 1523.79416 3.58 39.68 4914 4914 MS2 23/44 Linfeng_20130405_rIgG8.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 277 3.70 0.00 0 47 50 2 679.35638 1357.70549 7.10 40.43 4379 4379 MS2 20/22 Linfeng_20130408_Smad2_7.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 249 3.70 0.00 0 19 7 2 738.38214 1475.75701 5.46 41.31 4577 4577 MS2 20/22 Linfeng_20130408_Smad2_10.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 234 3.70 0.00 1 33 16 3 533.95148 1599.83988 3.83 40.86 5337 5337 MS2 28/52 Linfeng_20130405_rIgG5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 183 3.67 0.00 0 16 50 2 829.40649 1657.80571 7.70 38.99 3987 3987 MS2 20/32 Linfeng_20130408_Smad2_6.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 3.67 0.00 0 11 4 2 738.38116 1475.75505 4.14 41.43 5014 5014 MS2 20/22 Linfeng_20130408_Smad2_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 81 3.67 0.00 1 4 35 3 673.30109 2017.88871 2.22 36.88 3616 3616 MS2 30/60 Linfeng_20130405_rIgG6.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 251 3.66 0.00 0 42 22 2 738.39990 1475.79253 4.88 40.75 4811 4811 MS2 18/22 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 228 3.66 0.00 1 15 9 2 800.42450 1599.84172 4.98 40.92 5220 5220 MS2 21/26 Linfeng_20130405_rIgG9.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 175 3.66 0.00 1 4 36 3 783.75116 2349.23893 8.69 43.22 6121 6121 MS2 30/80 Linfeng_20130405_rIgG9.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 84 3.66 0.00 1 1 12 3 673.30145 2017.88980 2.76 36.89 3851 3851 MS2 27/60 Linfeng_20130405_rIgG4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 281 3.66 0.00 0 13 50 2 590.30920 1179.61113 9.04 38.39 3804 3804 MS2 17/18 Linfeng_20130408_Smad2_6.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 255 3.65 0.00 0 29 8 2 590.30640 1179.60552 4.28 38.59 4163 4163 MS2 17/18 Linfeng_20130405_rIgG3.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 228 3.65 0.00 0 7 49 2 590.30841 1179.60954 7.69 38.22 4089 4089 MS2 17/18 Linfeng_20130408_Smad2_8.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 255 3.64 0.00 0 6 9 2 590.30634 1179.60539 4.17 38.66 3971 3971 MS2 17/18 Linfeng_20130405_rIgG10.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 212 3.64 0.00 0 2 8 2 858.93359 1716.85991 5.08 39.27 4432 4432 MS2 21/28 Linfeng_20130405_rIgG2.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 3.64 0.00 0 12 6 2 692.35364 1383.70000 6.97 41.59 5478 5478 MS2 18/22 Linfeng_20130405_rIgG9.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 3.64 0.00 0 2 1 2 692.35291 1383.69853 5.91 41.55 5639 5639 MS2 19/22 Linfeng_20130405_rIgG8.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 250 3.64 0.00 0 18 17 3 572.95758 1716.85819 4.08 39.35 4651 4651 MS2 31/56 Linfeng_20130405_rIgG4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 3.64 0.00 0 16 50 3 861.06696 2581.18631 9.49 36.85 3558 3558 MS2 28/100 Linfeng_20130408_Smad2_4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 219 3.63 0.00 0 20 4 2 590.30658 1179.60588 4.59 38.59 4196 4196 MS2 17/18 Linfeng_20130405_rIgG2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 223 3.63 0.00 0 7 14 2 590.30865 1179.61003 8.11 38.56 3793 3793 MS2 17/18 Linfeng_20130408_Smad2_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 297 3.63 0.00 1 13 50 3 615.65503 1844.95053 2.38 37.68 3719 3719 MS2 31/60 Linfeng_20130408_Smad2_3.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 111 3.62 0.00 0 3 8 3 861.06256 2581.17313 4.38 36.97 3578 3578 MS2 32/100 Linfeng_20130405_rIgG1.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 221 3.62 0.00 0 8 2 2 692.35242 1383.69756 5.20 41.31 4574 4574 MS2 19/22 Linfeng_20130408_Smad2_10.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 208 3.62 0.00 1 29 27 3 508.60318 1523.79499 4.12 39.85 4587 4587 MS2 23/44 Linfeng_20130405_rIgG6.raw High SLNNQFASFIDKVR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 222 3.62 0.00 1 15 13 2 819.93738 1638.86748 4.62 41.71 5186 5186 MS2 16/26 Linfeng_20130405_rIgG7.raw High NSKIEISELNR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 325 3.62 0.00 1 16 17 3 434.90729 1302.70731 4.64 37.14 3691 3691 MS2 23/40 Linfeng_20130405_rIgG6.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 253 3.62 0.00 0 23 3 2 738.38196 1475.75664 5.22 41.61 5486 5486 MS2 19/22 Linfeng_20130405_rIgG9.raw High NSKIEISELNR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 321 3.62 0.00 1 26 21 3 434.90729 1302.70731 4.64 37.10 3870 3870 MS2 24/40 Linfeng_20130405_rIgG9.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 118 3.62 0.00 0 4 28 3 855.73053 2565.17704 3.95 37.38 3864 3864 MS2 29/100 Linfeng_20130405_rIgG2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 254 3.62 0.00 0 6 4 2 590.30591 1179.60454 3.45 38.59 4373 4373 MS2 17/18 Linfeng_20130405_rIgG9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 214 3.61 0.00 0 4 50 2 858.93695 1716.86662 9.00 38.88 3784 3784 MS2 21/28 Linfeng_20130408_Smad2_10.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 242 3.61 0.00 0 5 50 2 590.30835 1179.60942 7.59 38.10 3537 3537 MS2 17/18 Linfeng_20130408_Smad2_10.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.61 0.00 0 4 1 2 692.35248 1383.69768 5.29 41.53 4753 4753 MS2 19/22 Linfeng_20130408_Smad2_2.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 221 3.61 0.00 0 8 0 2 692.35193 1383.69658 4.49 41.61 5478 5478 MS2 19/22 Linfeng_20130405_rIgG4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 232 3.60 0.00 1 25 50 3 447.56500 1340.68045 8.33 33.93 2511 2511 MS2 27/44 Linfeng_20130408_Smad2_7.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 192 3.60 0.00 0 8 50 3 553.27283 1657.80393 6.63 39.12 4159 4159 MS2 37/64 Linfeng_20130408_Smad2_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 3.60 0.00 0 1 50 2 858.93726 1716.86724 9.35 39.20 4053 4053 MS2 22/28 Linfeng_20130408_Smad2_6.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 223 3.60 0.00 0 11 7 2 590.30688 1179.60649 5.10 38.62 4167 4167 MS2 17/18 Linfeng_20130405_rIgG6.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 228 3.60 0.00 0 15 4 2 738.38110 1475.75493 4.06 41.61 5017 5017 MS2 19/22 Linfeng_20130405_rIgG10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 118 3.60 0.00 0 3 9 3 855.72931 2565.17337 2.52 37.47 4047 4047 MS2 31/100 Linfeng_20130405_rIgG4.raw High LNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 272 3.59 0.00 0 15 25 3 453.23846 1357.70084 3.67 40.65 4870 4870 MS2 29/44 Linfeng_20130405_rIgG3.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 P04264 M8(Oxidation) CID 1.0000 0.0000 1 1 107 3.59 0.00 1 13 50 3 667.97076 2001.89774 4.21 38.41 4025 4025 MS2 25/60 Linfeng_20130405_rIgG7.raw High SLNNQFASFIDKVR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 3.59 0.00 1 27 15 2 819.93805 1638.86882 5.44 41.70 5294 5294 MS2 19/26 Linfeng_20130405_rIgG2.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 217 3.58 0.00 0 16 0 2 692.35205 1383.69682 4.67 41.59 5105 5105 MS2 19/22 Linfeng_20130405_rIgG1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 115 3.58 0.00 0 11 50 3 861.06586 2581.18302 8.21 36.78 3349 3349 MS2 30/100 Linfeng_20130408_Smad2_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 194 3.58 0.00 0 8 6 3 553.27155 1657.80008 4.31 39.20 4406 4406 MS2 36/64 Linfeng_20130405_rIgG2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 117 3.58 0.00 0 5 15 3 855.73035 2565.17649 3.74 37.39 3718 3718 MS2 29/100 Linfeng_20130405_rIgG1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 84 3.58 0.00 1 31 7 3 563.33044 1687.97678 3.90 40.39 5020 5020 MS2 24/64 Linfeng_20130405_rIgG9.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 220 3.58 0.00 0 11 2 2 692.35205 1383.69682 4.67 41.59 5222 5222 MS2 19/22 Linfeng_20130405_rIgG6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 292 3.58 0.00 1 27 50 3 615.65588 1844.95310 3.77 37.59 3575 3575 MS2 24/60 Linfeng_20130408_Smad2_6.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 260 3.58 0.00 0 23 36 2 738.38342 1475.75957 7.20 41.50 4742 4742 MS2 20/22 Linfeng_20130408_Smad2_2.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 237 3.57 0.00 0 11 9 2 692.35156 1383.69585 3.97 41.58 5005 5005 MS2 19/22 Linfeng_20130405_rIgG10.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.57 0.00 0 2 50 2 858.93414 1716.86101 5.72 39.24 4261 4261 MS2 21/28 Linfeng_20130408_Smad2_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 255 3.57 0.00 0 7 8 3 572.95789 1716.85910 4.61 39.29 4407 4407 MS2 31/56 Linfeng_20130405_rIgG3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 9 3.57 0.00 0 0 50 2 1192.48914 2383.97099 7.98 34.07 2797 2797 MS2 19/60 Linfeng_20130408_Smad2_5.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 280 3.56 0.00 1 4 25 3 615.65527 1844.95127 2.77 37.73 4115 4115 MS2 24/60 Linfeng_20130405_rIgG4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.56 0.00 1 6 50 2 670.84363 1340.67998 7.98 34.10 2780 2780 MS2 19/22 Linfeng_20130405_rIgG6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 249 3.55 0.00 1 17 50 3 447.56479 1340.67981 7.86 33.79 2547 2547 MS2 23/44 Linfeng_20130408_Smad2_9.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 3.55 0.00 0 9 10 2 738.38318 1475.75908 6.87 41.44 5133 5133 MS2 20/22 Linfeng_20130408_Smad2_5.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 221 3.55 0.00 0 7 1 2 692.35193 1383.69658 4.49 41.54 5595 5595 MS2 19/22 Linfeng_20130405_rIgG5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 203 3.54 0.00 0 2 24 2 858.93335 1716.85942 4.80 39.06 4369 4369 MS2 21/28 Linfeng_20130408_Smad2_8.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 211 3.54 0.00 1 6 50 2 670.84259 1340.67790 6.43 34.14 2732 2732 MS2 19/22 Linfeng_20130405_rIgG1.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 204 3.54 0.00 0 5 50 2 651.86554 1302.72380 6.61 41.69 4812 4812 MS2 19/22 Linfeng_20130408_Smad2_2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 232 3.54 0.00 0 27 10 2 590.30658 1179.60588 4.59 38.63 4063 4063 MS2 17/18 Linfeng_20130405_rIgG1.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 3.53 0.00 0 13 25 2 651.86438 1302.72148 4.83 41.62 4851 4851 MS2 18/22 Linfeng_20130408_Smad2_6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 241 3.52 0.00 1 11 50 3 447.56445 1340.67881 7.10 34.03 2688 2688 MS2 24/44 Linfeng_20130408_Smad2_1.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.52 0.00 0 26 2 2 692.35248 1383.69768 5.29 41.56 5217 5217 MS2 19/22 Linfeng_20130405_rIgG3.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 196 3.52 0.00 0 2 22 2 858.93304 1716.85881 4.44 39.35 4649 4649 MS2 20/28 Linfeng_20130405_rIgG4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 196 3.52 0.00 0 41 36 3 553.27130 1657.79935 3.87 39.20 4374 4374 MS2 33/64 Linfeng_20130405_rIgG3.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 3.51 0.00 0 9 5 2 633.32507 1265.64287 4.43 39.08 4556 4556 MS2 17/20 Linfeng_20130405_rIgG4.raw High LALDLEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 1 147 3.51 0.00 0 47 8 2 639.36151 1277.71575 4.47 42.02 5312 5312 MS2 18/20 Linfeng_20130405_rIgG7.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 172 3.51 0.00 2 24 16 3 401.23740 1201.69764 6.38 32.94 2580 2580 MS2 23/36 Linfeng_20130405_rIgG9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 225 3.50 0.00 0 0 50 2 858.93719 1716.86711 9.28 39.17 3982 3982 MS2 20/28 Linfeng_20130408_Smad2_7.raw High RTNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 197 3.50 0.00 2 27 50 3 517.28491 1549.84018 4.41 35.85 3365 3365 MS2 24/48 Linfeng_20130405_rIgG2.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 77 3.50 0.00 1 31 50 3 563.33105 1687.97861 4.99 40.15 4676 4676 MS2 26/64 Linfeng_20130408_Smad2_5.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 245 3.49 0.00 0 2 3 2 692.35315 1383.69902 6.26 41.43 5130 5130 MS2 19/22 Linfeng_20130408_Smad2_5.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 182 3.49 0.00 2 25 50 3 401.23605 1201.69361 3.03 32.63 2423 2423 MS2 21/36 Linfeng_20130408_Smad2_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 3.49 0.00 0 18 23 3 572.95667 1716.85544 2.48 39.15 4350 4350 MS2 29/56 Linfeng_20130408_Smad2_5.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 208 3.48 0.00 1 35 16 3 508.60294 1523.79425 3.64 39.82 4464 4464 MS2 23/44 Linfeng_20130405_rIgG1.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 88 3.48 0.00 1 0 17 3 673.30170 2017.89054 3.12 36.85 3565 3565 MS2 28/60 Linfeng_20130405_rIgG7.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 251 3.47 0.00 1 29 50 3 533.95386 1599.84702 8.29 40.81 4506 4506 MS2 29/52 Linfeng_20130408_Smad2_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 262 3.46 0.00 0 24 50 3 572.95819 1716.86002 5.15 39.20 4185 4185 MS2 27/56 Linfeng_20130408_Smad2_3.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 P04264 M11(Oxidation) CID 1.0000 0.0000 1 1 105 3.46 0.00 1 35 36 3 667.97028 2001.89627 3.48 40.13 4709 4709 MS2 29/60 Linfeng_20130405_rIgG2.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 218 3.46 0.00 0 3 16 2 858.93365 1716.86003 5.16 39.30 4408 4408 MS2 20/28 Linfeng_20130405_rIgG3.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 161 3.46 0.00 2 31 50 3 401.23804 1201.69956 7.98 33.01 2505 2505 MS2 20/36 Linfeng_20130405_rIgG6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 3.46 0.00 0 6 6 3 861.06183 2581.17093 3.53 36.99 3886 3886 MS2 29/100 Linfeng_20130405_rIgG4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 3.46 0.00 0 0 50 3 855.72955 2565.17411 2.81 37.26 3496 3496 MS2 30/100 Linfeng_20130408_Smad2_6.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 213 3.46 0.00 1 18 50 2 762.40356 1523.79985 7.32 39.62 4390 4390 MS2 14/22 Linfeng_20130408_Smad2_1.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 205 3.46 0.00 1 13 50 3 508.60419 1523.79801 6.11 39.61 4186 4186 MS2 20/44 Linfeng_20130408_Smad2_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.45 0.00 0 0 50 2 858.93439 1716.86150 6.01 39.26 4015 4015 MS2 21/28 Linfeng_20130408_Smad2_2.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 172 3.45 0.00 2 33 50 3 401.23740 1201.69764 6.38 32.93 2344 2344 MS2 18/36 Linfeng_20130405_rIgG10.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 258 3.45 0.00 0 30 8 2 590.30615 1179.60503 3.86 38.56 4467 4467 MS2 17/18 Linfeng_20130405_rIgG5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 207 3.45 0.00 0 0 12 2 858.93127 1716.85527 2.38 39.28 4735 4735 MS2 18/28 Linfeng_20130405_rIgG5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 265 3.45 0.00 0 26 50 3 572.95831 1716.86039 5.36 39.27 4018 4018 MS2 29/56 Linfeng_20130408_Smad2_2.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 170 3.45 0.00 2 6 19 3 401.23773 1201.69864 7.22 32.44 2550 2550 MS2 21/36 Linfeng_20130405_rIgG4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 3.44 0.00 1 3 50 2 670.84100 1340.67473 4.06 33.98 3016 3016 MS2 19/22 Linfeng_20130405_rIgG5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 220 3.44 0.00 0 0 12 2 858.93060 1716.85393 1.60 39.14 4347 4347 MS2 19/28 Linfeng_20130408_Smad2_5.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 P04264 M8(Oxidation) CID 1.0000 0.0000 1 1 119 3.43 0.00 1 24 50 3 667.97174 2001.90067 5.67 38.41 4332 4332 MS2 25/60 Linfeng_20130405_rIgG4.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 3.43 0.00 0 2 50 2 858.93420 1716.86113 5.80 39.20 4183 4183 MS2 20/28 Linfeng_20130408_Smad2_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.43 0.00 0 1 50 2 858.93610 1716.86492 8.00 39.01 4238 4238 MS2 20/28 Linfeng_20130408_Smad2_9.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 210 3.43 0.00 1 27 26 3 508.60278 1523.79380 3.34 39.84 4380 4380 MS2 22/44 Linfeng_20130405_rIgG10.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 170 3.42 0.00 2 17 48 3 401.23776 1201.69873 7.29 32.91 2428 2428 MS2 20/36 Linfeng_20130405_rIgG7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 93 3.42 0.00 1 12 46 3 673.30292 2017.89420 4.94 36.84 3681 3681 MS2 29/60 Linfeng_20130405_rIgG2.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 81 3.42 0.00 1 18 50 3 673.30072 2017.88761 1.67 36.70 3578 3578 MS2 24/60 Linfeng_20130408_Smad2_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 268 3.41 0.00 0 13 50 3 572.95947 1716.86386 7.39 39.02 4239 4239 MS2 29/56 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.41 0.00 0 40 50 2 738.39850 1475.78972 2.98 37.90 3586 3586 MS2 16/22 Linfeng_20130408_Smad2_7.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 221 3.40 0.00 0 8 2 2 692.35211 1383.69695 4.76 41.57 5125 5125 MS2 18/22 Linfeng_20130405_rIgG7.raw High SLNNQFASFIDKVR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 215 3.40 0.00 1 17 15 2 819.93781 1638.86833 5.15 41.76 5078 5078 MS2 15/26 Linfeng_20130405_rIgG10.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 150 3.40 0.00 2 11 7 3 401.23694 1201.69626 5.23 32.74 2638 2638 MS2 21/36 Linfeng_20130405_rIgG8.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 250 3.39 0.00 0 6 6 3 572.95764 1716.85837 4.19 39.30 4324 4324 MS2 29/56 Linfeng_20130405_rIgG7.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 169 3.39 0.00 2 7 50 3 401.23779 1201.69883 7.37 32.70 2226 2226 MS2 21/36 Linfeng_20130408_Smad2_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 218 3.39 0.00 0 0 18 2 858.93121 1716.85515 2.31 39.33 4413 4413 MS2 21/28 Linfeng_20130405_rIgG6.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 169 3.37 0.00 2 11 26 3 401.23779 1201.69883 7.37 32.93 2452 2452 MS2 22/36 Linfeng_20130405_rIgG3.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 230 3.36 0.00 1 24 50 2 800.42590 1599.84453 6.74 40.65 4789 4789 MS2 19/26 Linfeng_20130408_Smad2_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 201 3.36 0.00 0 13 4 2 858.93298 1716.85869 4.37 39.41 4669 4669 MS2 18/28 Linfeng_20130405_rIgG9.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 248 3.36 0.00 1 9 50 2 697.37482 1393.74236 7.27 36.58 3449 3449 MS2 16/22 Linfeng_20130408_Smad2_9.raw High LLRDYQELmNTK Unambiguous 1 1 P04264 M9(Oxidation) CID 1.0000 0.0000 1 1 238 3.36 0.00 1 2 13 3 513.93475 1539.78971 3.96 37.30 3833 3833 MS2 22/44 Linfeng_20130405_rIgG2.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 238 3.35 0.00 1 14 27 2 697.37170 1393.73613 2.80 36.95 3818 3818 MS2 16/22 Linfeng_20130405_rIgG9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 261 3.35 0.00 0 18 9 3 572.95740 1716.85764 3.76 39.36 4648 4648 MS2 27/56 Linfeng_20130405_rIgG9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 3.35 0.00 0 9 4 2 858.93256 1716.85784 3.88 39.32 4773 4773 MS2 21/28 Linfeng_20130405_rIgG8.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 231 3.35 0.00 1 25 50 2 800.42456 1599.84184 5.06 40.54 4312 4312 MS2 19/26 Linfeng_20130408_Smad2_10.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 217 3.35 0.00 1 17 50 2 670.84406 1340.68083 8.62 34.10 2522 2522 MS2 17/22 Linfeng_20130408_Smad2_2.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 222 3.35 0.00 0 22 2 2 692.35278 1383.69829 5.73 41.56 5237 5237 MS2 18/22 Linfeng_20130405_rIgG2.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 241 3.35 0.00 1 10 50 3 447.56488 1340.68009 8.06 34.12 2526 2526 MS2 24/44 Linfeng_20130408_Smad2_2.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 229 3.34 0.00 1 14 50 2 670.84338 1340.67949 7.62 34.05 2825 2825 MS2 19/22 Linfeng_20130405_rIgG2.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 3.34 0.00 1 23 50 3 447.56436 1340.67853 6.90 33.89 2745 2745 MS2 23/44 Linfeng_20130408_Smad2_5.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 235 3.34 0.00 0 15 1 2 633.32520 1265.64311 4.62 39.05 4669 4669 MS2 17/20 Linfeng_20130405_rIgG8.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 169 3.34 0.00 2 21 50 3 401.23795 1201.69928 7.75 32.64 2251 2251 MS2 21/36 Linfeng_20130408_Smad2_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 268 3.34 0.00 0 24 50 3 572.96008 1716.86570 8.45 39.17 3983 3983 MS2 28/56 Linfeng_20130408_Smad2_7.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 116 3.33 0.00 0 13 50 3 861.06549 2581.18192 7.79 36.87 3626 3626 MS2 27/100 Linfeng_20130408_Smad2_5.raw High WELLQQVDTSTR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 3.33 0.00 0 17 12 2 738.38153 1475.75578 4.64 41.47 4935 4935 MS2 20/22 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 261 3.33 0.00 0 11 35 3 492.60300 1475.79444 6.18 38.11 3830 3830 MS2 26/44 Linfeng_20130408_Smad2_3.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 96 3.32 0.00 1 24 50 3 673.30365 2017.89640 6.03 36.60 3456 3456 MS2 23/60 Linfeng_20130408_Smad2_9.raw High LLRDYQELmNTK Unambiguous 1 1 P04264 M9(Oxidation) CID 1.0000 0.0000 1 1 238 3.31 0.00 1 6 26 3 513.93463 1539.78934 3.72 37.38 3772 3772 MS2 19/44 Linfeng_20130405_rIgG6.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 226 3.30 0.00 0 25 35 2 858.93182 1716.85637 3.02 39.38 4224 4224 MS2 21/28 Linfeng_20130405_rIgG10.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 220 3.30 0.00 1 5 31 3 508.60455 1523.79911 6.83 39.61 4387 4387 MS2 24/44 Linfeng_20130408_Smad2_1.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 283 3.30 0.00 0 33 12 3 492.60138 1475.78958 2.89 38.21 4332 4332 MS2 27/44 Linfeng_20130405_rIgG5.raw High NKLNDLEDALQQAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 219 3.29 0.00 1 35 41 2 800.42377 1599.84026 4.07 40.91 4966 4966 MS2 19/26 Linfeng_20130405_rIgG6.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 245 3.29 0.00 1 0 50 2 697.37122 1393.73516 2.10 36.69 3574 3574 MS2 17/22 Linfeng_20130408_Smad2_5.raw High LLRDYQELmNTK Unambiguous 1 1 P04264 M9(Oxidation) CID 1.0000 0.0000 1 1 250 3.27 0.00 1 11 35 3 513.93555 1539.79209 5.50 37.20 3669 3669 MS2 23/44 Linfeng_20130408_Smad2_1.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 3.27 0.00 0 24 27 2 651.86487 1302.72246 5.58 41.66 5004 5004 MS2 19/22 Linfeng_20130408_Smad2_3.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 3.27 0.00 1 4 30 2 697.37238 1393.73747 3.76 36.81 3908 3908 MS2 17/22 Linfeng_20130405_rIgG8.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 259 3.27 0.00 0 26 24 2 590.30634 1179.60539 4.17 38.54 4478 4478 MS2 17/18 Linfeng_20130405_rIgG8.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 163 3.26 0.00 2 5 50 3 401.23831 1201.70038 8.66 32.87 2369 2369 MS2 21/36 Linfeng_20130408_Smad2_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 201 3.26 0.00 0 10 50 2 858.93353 1716.85979 5.01 39.26 4313 4313 MS2 19/28 Linfeng_20130405_rIgG7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 100 3.26 0.00 1 15 50 3 673.30408 2017.89768 6.66 36.81 3472 3472 MS2 24/60 Linfeng_20130408_Smad2_3.raw High LLRDYQELmNTK Unambiguous 1 1 P04264 M9(Oxidation) CID 1.0000 0.0000 1 1 250 3.25 0.00 1 3 14 3 513.93494 1539.79026 4.31 37.35 4004 4004 MS2 24/44 Linfeng_20130405_rIgG4.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 214 3.25 0.00 1 13 50 3 508.60507 1523.80066 7.85 39.57 4399 4399 MS2 21/44 Linfeng_20130408_Smad2_4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 231 3.24 0.00 1 21 50 3 447.56546 1340.68183 9.36 33.89 2646 2646 MS2 24/44 Linfeng_20130408_Smad2_4.raw High SLDLDSIIAEVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 227 3.23 0.00 0 14 50 2 651.86591 1302.72453 7.17 43.75 5777 5777 MS2 16/22 Linfeng_20130408_Smad2_9.raw High NSKIEISELNR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 325 3.23 0.00 1 16 22 3 434.90720 1302.70703 4.43 37.10 3644 3644 MS2 18/40 Linfeng_20130405_rIgG7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 296 3.23 0.00 1 29 31 3 615.65509 1844.95072 2.48 37.73 3820 3820 MS2 25/60 Linfeng_20130405_rIgG7.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 209 3.23 0.00 1 30 19 3 508.60281 1523.79389 3.40 39.77 4801 4801 MS2 22/44 Linfeng_20130405_rIgG4.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 161 3.23 0.00 0 16 50 2 563.27826 1125.54924 6.18 35.18 2834 2834 MS2 15/18 Linfeng_20130408_Smad2_2.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 206 3.22 0.00 1 29 50 3 508.60416 1523.79792 6.05 39.68 4150 4150 MS2 20/44 Linfeng_20130408_Smad2_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 P04264 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 3.21 0.00 0 4 39 3 855.73059 2565.17722 4.02 37.47 3803 3803 MS2 29/100 Linfeng_20130405_rIgG6.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 172 3.20 0.00 2 8 50 3 401.23749 1201.69791 6.61 32.78 2347 2347 MS2 22/36 Linfeng_20130408_Smad2_1.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 3.20 0.00 1 46 50 3 447.56393 1340.67725 5.94 34.01 2696 2696 MS2 22/44 Linfeng_20130405_rIgG7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 P04264 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 81 3.19 0.00 1 6 46 3 673.30066 2017.88742 1.58 36.93 3813 3813 MS2 24/60 Linfeng_20130405_rIgG9.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 239 3.19 0.00 0 18 3 2 633.32452 1265.64177 3.56 39.15 4142 4142 MS2 15/20 Linfeng_20130405_rIgG10.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 169 3.19 0.00 2 15 50 3 401.23779 1201.69883 7.37 33.06 2471 2471 MS2 19/36 Linfeng_20130405_rIgG1.raw High QISNLQQSISDAEQR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 258 3.18 0.00 0 33 50 3 572.96033 1716.86643 8.88 38.88 3786 3786 MS2 25/56 Linfeng_20130408_Smad2_10.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 214 3.17 0.00 1 2 22 2 697.37195 1393.73662 3.15 36.94 3868 3868 MS2 18/22 Linfeng_20130405_rIgG4.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 208 3.17 0.00 1 32 17 3 508.60315 1523.79489 4.06 39.78 4572 4572 MS2 21/44 Linfeng_20130405_rIgG3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 158 3.16 0.00 0 3 45 2 546.76050 1092.51372 9.89 21.42 1363 1363 MS2 19/26 Linfeng_20130408_Smad2_5.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 243 3.16 0.00 0 18 42 2 633.32562 1265.64397 5.30 39.00 4225 4225 MS2 17/20 Linfeng_20130405_rIgG7.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 307 3.16 0.00 0 3 3 2 487.27109 973.53490 3.66 38.42 4101 4101 MS2 13/14 Linfeng_20130405_rIgG3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 167 3.16 0.00 0 3 50 2 546.76050 1092.51372 9.89 23.44 1480 1480 MS2 20/26 Linfeng_20130408_Smad2_5.raw High LRSEIDNVKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 170 3.15 0.00 2 23 50 3 401.23776 1201.69873 7.29 32.85 2518 2518 MS2 22/36 Linfeng_20130405_rIgG2.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 199 3.15 0.00 1 22 50 2 762.40240 1523.79753 5.80 39.85 4506 4506 MS2 15/22 Linfeng_20130405_rIgG7.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 207 3.13 0.00 1 4 50 2 670.84259 1340.67790 6.43 34.03 2702 2702 MS2 17/22 Linfeng_20130405_rIgG7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 148 3.13 0.00 0 4 50 2 546.76007 1092.51286 9.11 19.41 1246 1246 MS2 19/26 Linfeng_20130408_Smad2_5.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 210 3.12 0.00 1 9 50 2 670.84210 1340.67693 5.70 34.12 2639 2639 MS2 18/22 Linfeng_20130405_rIgG10.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 271 3.09 0.00 0 20 26 2 633.32526 1265.64324 4.72 39.06 4209 4209 MS2 18/20 Linfeng_20130405_rIgG1.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 244 3.08 0.00 1 0 50 2 697.37274 1393.73821 4.29 36.94 3475 3475 MS2 17/22 Linfeng_20130405_rIgG10.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 247 3.08 0.00 1 6 43 2 697.37225 1393.73723 3.59 36.90 3580 3580 MS2 16/22 Linfeng_20130405_rIgG7.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 3.08 0.00 0 35 41 2 692.35162 1383.69597 4.05 41.35 4890 4890 MS2 16/22 Linfeng_20130408_Smad2_3.raw High AQYEDIAQKSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 238 3.08 0.00 1 20 50 2 640.83264 1280.65801 7.70 33.83 2762 2762 MS2 16/20 Linfeng_20130405_rIgG2.raw High LLRDYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 205 3.07 0.00 1 19 50 2 762.40253 1523.79778 5.96 39.67 4338 4338 MS2 16/22 Linfeng_20130408_Smad2_3.raw High SLNNQFASFIDKVR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 206 3.07 0.00 1 9 10 2 819.93787 1638.86846 5.22 41.72 5275 5275 MS2 14/26 Linfeng_20130405_rIgG6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 232 3.07 0.00 1 18 50 2 670.84363 1340.67998 7.98 33.86 2738 2738 MS2 16/22 Linfeng_20130408_Smad2_5.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 246 3.05 0.00 1 8 50 2 697.37482 1393.74236 7.27 36.92 3503 3503 MS2 14/22 Linfeng_20130408_Smad2_3.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 303 3.04 0.00 0 5 9 2 487.27176 973.53624 5.04 37.92 3479 3479 MS2 13/14 Linfeng_20130408_Smad2_10.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 262 3.03 0.00 0 4 50 2 633.32794 1265.64861 8.96 38.81 4152 4152 MS2 18/20 Linfeng_20130408_Smad2_4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 224 3.02 0.00 1 0 50 2 670.84290 1340.67851 6.89 34.08 2907 2907 MS2 18/22 Linfeng_20130405_rIgG9.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 155 3.02 0.00 0 22 50 2 563.27832 1125.54936 6.29 34.87 2892 2892 MS2 15/18 Linfeng_20130408_Smad2_9.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 228 3.02 0.00 1 3 50 2 697.37549 1393.74370 8.23 36.81 3359 3359 MS2 17/22 Linfeng_20130408_Smad2_6.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 191 3.01 0.00 0 3 40 2 533.26801 1065.52873 7.12 34.68 2971 2971 MS2 13/16 Linfeng_20130408_Smad2_5.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 318 3.00 0.00 0 10 28 2 487.27127 973.53526 4.04 38.16 4025 4025 MS2 13/14 Linfeng_20130408_Smad2_5.raw High SLNNQFASFIDK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 224 2.99 0.00 0 27 24 2 692.35193 1383.69658 4.49 41.32 4741 4741 MS2 16/22 Linfeng_20130408_Smad2_6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 223 2.98 0.00 1 8 50 2 670.84314 1340.67900 7.25 33.78 2545 2545 MS2 18/22 Linfeng_20130408_Smad2_9.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 259 2.97 0.00 0 19 50 2 633.32806 1265.64885 9.16 38.51 3667 3667 MS2 15/20 Linfeng_20130408_Smad2_10.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 257 2.95 0.00 0 11 50 2 633.32690 1265.64653 7.32 38.80 3867 3867 MS2 16/20 Linfeng_20130408_Smad2_7.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 162 2.95 0.00 0 15 50 2 563.27814 1125.54900 5.97 34.72 2618 2618 MS2 15/18 Linfeng_20130408_Smad2_10.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 250 2.95 0.00 0 27 50 2 633.32751 1265.64775 8.29 38.59 3801 3801 MS2 16/20 Linfeng_20130408_Smad2_2.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 240 2.94 0.00 1 2 50 2 697.37543 1393.74358 8.14 36.76 3531 3531 MS2 17/22 Linfeng_20130408_Smad2_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 153 2.94 0.00 0 3 50 2 546.76001 1092.51274 9.00 22.43 1422 1422 MS2 19/26 Linfeng_20130408_Smad2_5.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 256 2.94 0.00 0 12 50 2 633.32776 1265.64824 8.68 38.67 4122 4122 MS2 18/20 Linfeng_20130408_Smad2_9.raw High GENALKDAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 350 2.94 0.00 1 3 50 2 473.25534 945.50340 3.56 30.39 1816 1816 MS2 15/16 Linfeng_20130408_Smad2_6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 218 2.93 0.00 1 14 50 2 670.84436 1340.68144 9.07 33.73 2727 2727 MS2 18/22 Linfeng_20130408_Smad2_8.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 257 2.93 0.00 0 23 8 2 633.32733 1265.64739 8.00 38.72 4253 4253 MS2 16/20 Linfeng_20130408_Smad2_8.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 324 2.92 0.00 0 10 32 2 487.27179 973.53630 5.11 38.21 3745 3745 MS2 13/14 Linfeng_20130408_Smad2_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 145 2.92 0.00 0 5 50 2 546.76019 1092.51311 9.33 21.68 1262 1262 MS2 18/26 Linfeng_20130408_Smad2_9.raw High GENALKDAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 332 2.92 0.00 1 8 50 2 473.25549 945.50371 3.88 30.41 1975 1975 MS2 14/16 Linfeng_20130408_Smad2_5.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 12 2.91 0.00 0 51 50 2 666.76886 1332.53044 8.18 34.54 2670 2670 MS2 14/18 Linfeng_20130408_Smad2_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 170 2.88 0.00 0 2 50 2 546.76044 1092.51360 9.78 17.39 1127 1127 MS2 19/26 Linfeng_20130408_Smad2_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 151 2.88 0.00 0 5 50 2 546.76025 1092.51323 9.45 17.96 1063 1063 MS2 18/26 Linfeng_20130408_Smad2_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 142 2.88 0.00 0 3 41 2 546.75909 1092.51091 7.32 6.52 436 436 MS2 19/26 Linfeng_20130408_Smad2_1.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 262 2.86 0.00 0 43 50 2 633.32715 1265.64702 7.71 38.78 4231 4231 MS2 15/20 Linfeng_20130408_Smad2_5.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 323 2.86 0.00 0 12 41 2 487.27136 973.53545 4.23 38.31 3952 3952 MS2 13/14 Linfeng_20130408_Smad2_1.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 2.86 0.00 1 21 50 2 670.84406 1340.68083 8.62 33.64 2332 2332 MS2 16/22 Linfeng_20130408_Smad2_10.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 265 2.86 0.00 0 35 50 2 633.32825 1265.64922 9.45 38.80 3929 3929 MS2 15/20 Linfeng_20130408_Smad2_6.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 188 2.86 0.00 0 7 50 2 533.26813 1065.52898 7.35 34.68 2884 2884 MS2 13/16 Linfeng_20130408_Smad2_4.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 299 2.85 0.00 0 9 38 2 487.27158 973.53588 4.67 38.26 3880 3880 MS2 13/14 Linfeng_20130408_Smad2_3.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 160 2.85 0.00 0 24 50 2 563.27838 1125.54949 6.40 35.13 3022 3022 MS2 15/18 Linfeng_20130408_Smad2_1.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 10 2.85 0.00 0 18 50 2 666.76703 1332.52678 5.43 34.68 2880 2880 MS2 14/18 Linfeng_20130408_Smad2_1.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 128 2.84 0.00 0 35 50 2 571.26746 1141.52764 7.18 38.26 4103 4103 MS2 13/16 Linfeng_20130408_Smad2_8.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 313 2.84 0.00 0 27 50 2 487.27167 973.53606 4.86 37.99 4016 4016 MS2 13/14 Linfeng_20130408_Smad2_8.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 14 2.83 0.00 0 20 50 2 666.76910 1332.53093 8.55 34.28 2501 2501 MS2 14/18 Linfeng_20130408_Smad2_10.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 200 2.82 0.00 0 4 15 2 533.26758 1065.52788 6.31 34.80 2876 2876 MS2 13/16 Linfeng_20130408_Smad2_3.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 348 2.82 0.00 0 8 25 2 487.27216 973.53703 5.86 38.37 3728 3728 MS2 13/14 Linfeng_20130408_Smad2_2.raw High NMQDMVEDYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 29 2.81 0.00 0 19 50 2 650.77386 1300.54045 8.26 39.45 4362 4362 MS2 15/18 Linfeng_20130408_Smad2_4.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 14 2.80 0.00 0 48 50 2 666.76862 1332.52995 7.81 34.57 2808 2808 MS2 13/18 Linfeng_20130408_Smad2_3.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 120 2.80 0.00 0 46 50 2 571.26776 1141.52825 7.71 38.40 3738 3738 MS2 13/16 Linfeng_20130408_Smad2_7.raw High NMQDMVEDYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 31 2.80 0.00 0 42 50 2 650.77466 1300.54204 9.48 39.49 4150 4150 MS2 16/18 Linfeng_20130408_Smad2_6.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 202 2.79 0.00 1 28 50 2 670.84442 1340.68157 9.16 33.91 2507 2507 MS2 18/22 Linfeng_20130408_Smad2_7.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 233 2.78 0.00 1 22 50 2 697.37537 1393.74346 8.05 36.91 3339 3339 MS2 16/22 Linfeng_20130408_Smad2_2.raw High NMQDmVEDYR Unambiguous 1 1 P04264 M5(Oxidation) CID 1.0000 0.0000 1 1 23 2.77 0.00 0 7 10 2 658.76697 1316.52666 1.54 37.29 3502 3502 MS2 15/18 Linfeng_20130408_Smad2_6.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 236 2.76 0.00 0 16 50 2 633.32703 1265.64678 7.52 38.50 3961 3961 MS2 16/20 Linfeng_20130408_Smad2_3.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 336 2.76 0.00 0 17 50 2 487.27057 973.53386 2.60 38.19 3672 3672 MS2 13/14 Linfeng_20130408_Smad2_7.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 118 2.76 0.00 0 9 50 2 571.26868 1141.53008 9.32 38.42 4110 4110 MS2 13/16 Linfeng_20130408_Smad2_5.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 162 2.76 0.00 0 42 50 2 563.27820 1125.54912 6.08 34.94 2967 2967 MS2 15/18 Linfeng_20130408_Smad2_4.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 65 2.74 0.00 0 42 37 2 579.26428 1157.52129 5.99 35.04 2948 2948 MS2 13/16 Linfeng_20130408_Smad2_9.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 198 2.74 0.00 0 9 50 2 533.26794 1065.52861 7.00 34.42 2541 2541 MS2 13/16 Linfeng_20130408_Smad2_10.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 114 2.74 0.00 0 27 50 2 571.26752 1141.52776 7.29 38.54 3785 3785 MS2 14/16 Linfeng_20130408_Smad2_2.raw High NmQDMVEDYR Unambiguous 1 1 P04264 M2(Oxidation) CID 1.0000 0.0000 1 1 25 2.74 0.00 0 20 50 2 658.77014 1316.53301 6.37 36.65 3487 3487 MS2 15/18 Linfeng_20130408_Smad2_1.raw High NmQDMVEDYR Unambiguous 1 1 P04264 M2(Oxidation) CID 1.0000 0.0000 1 1 23 2.73 0.00 0 28 50 2 658.77118 1316.53508 7.94 36.53 3227 3227 MS2 14/18 Linfeng_20130408_Smad2_7.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 326 2.73 0.00 0 50 50 2 487.27151 973.53575 4.54 38.02 3905 3905 MS2 13/14 Linfeng_20130408_Smad2_9.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 121 2.73 0.00 0 12 50 2 571.26752 1141.52776 7.29 38.54 4028 4028 MS2 13/16 Linfeng_20130408_Smad2_1.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 11 2.73 0.00 0 39 50 2 666.76855 1332.52983 7.72 34.50 2917 2917 MS2 14/18 Linfeng_20130408_Smad2_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 163 2.72 0.00 0 4 50 2 546.76050 1092.51372 9.89 19.97 1178 1178 MS2 19/26 Linfeng_20130408_Smad2_6.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 118 2.72 0.00 0 18 50 2 571.26807 1141.52886 8.25 38.41 4025 4025 MS2 13/16 Linfeng_20130408_Smad2_4.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 200 2.72 0.00 0 4 39 2 533.26740 1065.52751 5.97 34.89 2741 2741 MS2 14/16 Linfeng_20130408_Smad2_2.raw High NmQDMVEDYR Unambiguous 1 1 P04264 M2(Oxidation) CID 1.0000 0.0000 1 1 24 2.71 0.00 0 34 50 2 658.77209 1316.53691 9.33 36.51 3265 3265 MS2 13/18 Linfeng_20130408_Smad2_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 159 2.70 0.00 0 14 50 2 546.75800 1092.50871 5.31 30.84 1898 1898 MS2 16/26 Linfeng_20130408_Smad2_7.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 200 2.70 0.00 0 4 43 2 533.26752 1065.52776 6.20 34.71 2722 2722 MS2 13/16 Linfeng_20130408_Smad2_7.raw High LLRDYQELmNTK Unambiguous 1 1 P04264 M9(Oxidation) CID 1.0000 0.0000 1 1 191 2.70 0.00 1 0 50 2 770.40173 1539.79619 8.17 37.25 3608 3608 MS2 15/22 Linfeng_20130408_Smad2_3.raw High TNAENEFVTIK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 255 2.69 0.00 0 21 50 2 633.32648 1265.64568 6.65 38.55 4034 4034 MS2 16/20 Linfeng_20130408_Smad2_1.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 142 2.69 0.00 0 3 48 2 546.76025 1092.51323 9.45 20.42 1304 1304 MS2 18/26 Linfeng_20130408_Smad2_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 143 2.69 0.00 0 4 50 2 546.75983 1092.51238 8.66 18.14 1079 1079 MS2 19/26 Linfeng_20130408_Smad2_4.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 156 2.67 0.00 0 44 50 2 563.27777 1125.54827 5.32 34.81 3055 3055 MS2 15/18 Linfeng_20130408_Smad2_8.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 13 2.66 0.00 0 15 50 2 666.76880 1332.53032 8.09 34.41 2744 2744 MS2 14/18 Linfeng_20130408_Smad2_9.raw High TNAENEFVTIKK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 228 2.66 0.00 1 32 50 2 697.37598 1393.74468 8.93 36.42 3084 3084 MS2 13/22 Linfeng_20130408_Smad2_10.raw High LRSEIDNVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 313 2.66 0.00 1 6 50 2 537.30475 1073.60222 6.72 34.02 2686 2686 MS2 12/16 Linfeng_20130408_Smad2_1.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 114 2.66 0.00 0 16 50 2 571.26788 1141.52849 7.93 38.14 3551 3551 MS2 13/16 Linfeng_20130408_Smad2_10.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 111 2.66 0.00 0 69 50 2 571.26788 1141.52849 7.93 38.41 3811 3811 MS2 13/16 Linfeng_20130408_Smad2_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 152 2.66 0.00 0 3 50 2 546.75946 1092.51164 7.99 18.40 1187 1187 MS2 18/26 Linfeng_20130408_Smad2_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 153 2.66 0.00 0 3 50 2 546.76007 1092.51286 9.11 20.15 1193 1193 MS2 21/26 Linfeng_20130408_Smad2_4.raw High SKAEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 190 2.65 0.00 1 22 50 2 670.84424 1340.68120 8.89 33.99 2640 2640 MS2 16/22 Linfeng_20130408_Smad2_3.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 61 2.65 0.00 0 37 30 2 579.26398 1157.52068 5.46 35.27 3062 3062 MS2 13/16 Linfeng_20130408_Smad2_1.raw High NMQDmVEDYR Unambiguous 1 1 P04264 M5(Oxidation) CID 1.0000 0.0000 1 1 24 2.63 0.00 0 0 50 2 658.76678 1316.52629 1.27 36.92 3232 3232 MS2 15/18 Linfeng_20130408_Smad2_10.raw High IEISELNR Unambiguous 2 2 P35908;P04264 CID 1.0000 0.0000 1 1 382 2.63 0.00 0 43 50 2 487.27261 973.53795 6.80 38.18 3952 3952 MS2 13/14 Linfeng_20130408_Smad2_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 161 2.63 0.00 0 4 50 2 546.76050 1092.51372 9.89 20.68 1205 1205 MS2 20/26 Linfeng_20130408_Smad2_9.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 14 2.63 0.00 0 46 50 2 666.76923 1332.53118 8.73 34.51 2667 2667 MS2 12/18 Linfeng_20130408_Smad2_6.raw High GENALKDAK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 320 2.62 0.00 1 9 50 2 473.25552 945.50377 3.94 30.26 1830 1830 MS2 13/16 Linfeng_20130408_Smad2_4.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 13 2.61 0.00 0 10 50 2 666.76801 1332.52873 6.90 34.40 2927 2927 MS2 15/18 Linfeng_20130408_Smad2_8.raw High LRSEIDNVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 331 2.61 0.00 1 10 50 2 537.30554 1073.60381 8.20 33.93 2509 2509 MS2 13/16 Linfeng_20130408_Smad2_7.raw High NmQDMVEDYR Unambiguous 1 1 P04264 M2(Oxidation) CID 1.0000 0.0000 1 1 24 2.60 0.00 0 0 50 2 658.76825 1316.52922 3.49 36.49 3522 3522 MS2 14/18 Linfeng_20130408_Smad2_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 164 2.60 0.00 0 3 50 2 546.76050 1092.51372 9.89 24.85 1497 1497 MS2 18/26 Linfeng_20130408_Smad2_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 137 2.59 0.00 0 2 50 2 546.75873 1092.51018 6.65 7.53 501 501 MS2 18/26 Linfeng_20130408_Smad2_1.raw High AEAESLYQSK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 160 2.59 0.00 0 55 50 2 563.27814 1125.54900 5.97 35.06 2953 2953 MS2 14/18 Linfeng_20130408_Smad2_3.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 73 2.59 0.00 0 40 50 2 579.26520 1157.52312 7.57 34.92 2672 2672 MS2 13/16 Linfeng_20130408_Smad2_10.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 73 2.58 0.00 0 42 45 2 579.26526 1157.52324 7.68 35.24 2867 2867 MS2 13/16 Linfeng_20130408_Smad2_7.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 124 2.58 0.00 0 13 50 2 571.26740 1141.52751 7.07 38.46 3944 3944 MS2 13/16 Linfeng_20130408_Smad2_3.raw High NmQDmVEDYR Unambiguous 1 1 P04264 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 14 2.58 0.00 0 29 50 2 666.76910 1332.53093 8.55 34.70 2689 2689 MS2 14/18 Linfeng_20130408_Smad2_2.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 55 2.58 0.00 0 21 50 2 579.26379 1157.52031 5.14 35.16 2988 2988 MS2 13/16 Linfeng_20130408_Smad2_3.raw High NMQDMVEDYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 28 2.57 0.00 0 23 50 2 650.77264 1300.53801 6.38 39.46 4450 4450 MS2 15/18 Linfeng_20130408_Smad2_5.raw High DYQELmNTK Unambiguous 1 1 P04264 M6(Oxidation) CID 1.0000 0.0000 1 1 74 2.56 0.00 0 28 50 2 579.26514 1157.52300 7.46 35.11 3019 3019 MS2 13/16 Linfeng_20130408_Smad2_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 173 2.56 0.00 0 5 50 2 546.76038 1092.51348 9.67 20.82 1269 1269 MS2 17/26 Linfeng_20130408_Smad2_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 149 2.55 0.00 0 3 50 2 546.76007 1092.51286 9.11 22.83 1383 1383 MS2 17/26 Linfeng_20130408_Smad2_3.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 216 2.55 0.00 0 7 45 2 533.26672 1065.52617 4.71 34.84 2926 2926 MS2 13/16 Linfeng_20130408_Smad2_1.raw High AQYEDIAQK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 189 2.55 0.00 0 6 42 2 533.26801 1065.52873 7.12 34.55 2972 2972 MS2 13/16 Linfeng_20130408_Smad2_8.raw High LRSEIDNVK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 331 2.54 0.00 1 10 50 2 537.30560 1073.60393 8.32 34.12 2527 2527 MS2 13/16 Linfeng_20130408_Smad2_2.raw High NMQDMVEDYR Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 32 2.54 0.00 0 46 50 2 650.77319 1300.53911 7.23 39.51 4285 4285 MS2 15/18 Linfeng_20130408_Smad2_3.raw High DYQELMNTK Unambiguous 1 1 P04264 CID 1.0000 0.0000 1 1 129 2.54 0.00 0 15 50 2 571.26764 1141.52800 7.50 38.28 3990 3990 MS2 13/16 Linfeng_20130408_Smad2_9.raw P13645 "Keratin, type I cytoskeletal 10 OS=Homo sapiens GN=KRT10 PE=1 SV=6 - [K1C10_HUMAN]" 58.05 4 27 30 312 593.31 50.17 23 144 626.73 56.16 27 168 584 58.8 5.21 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 177 7.00 0.00 0 3 2 3 789.76331 2367.27536 5.32 42.44 5601 5601 MS2 37/80 Linfeng_20130405_rIgG2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 178 6.53 0.00 0 2 18 3 789.76288 2367.27408 4.78 42.20 4914 4914 MS2 39/80 Linfeng_20130408_Smad2_10.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 6.24 0.00 0 0 7 2 1041.99219 2082.97710 5.86 41.25 4937 4937 MS2 22/32 Linfeng_20130408_Smad2_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 171 6.11 0.00 0 1 4 2 1041.99133 2082.97539 5.04 41.30 5134 5134 MS2 23/32 Linfeng_20130405_rIgG2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 6.07 0.00 0 0 4 2 1041.98950 2082.97173 3.28 41.32 5364 5364 MS2 23/32 Linfeng_20130405_rIgG4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 79 6.01 0.00 1 1 5 3 1018.21924 3052.64316 5.15 43.09 5860 5860 MS2 34/104 Linfeng_20130405_rIgG2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 182 6.01 0.00 0 14 10 3 789.76245 2367.27280 4.24 42.42 5577 5577 MS2 37/80 Linfeng_20130405_rIgG3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 5.98 0.00 0 4 10 2 1041.98901 2082.97075 2.81 41.24 5478 5478 MS2 23/32 Linfeng_20130405_rIgG5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 5.96 0.00 0 0 4 2 1172.00061 2342.99394 4.05 41.30 5356 5356 MS2 22/52 Linfeng_20130405_rIgG4.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 100 5.92 0.00 0 4 6 2 899.01416 1797.02104 5.19 42.33 5538 5538 MS2 23/30 Linfeng_20130405_rIgG3.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 99 5.85 0.00 0 10 34 2 899.01465 1797.02202 5.73 42.24 5314 5314 MS2 25/30 Linfeng_20130408_Smad2_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 45 5.80 0.00 0 7 24 2 1172.00110 2342.99492 4.46 41.24 4931 4931 MS2 28/52 Linfeng_20130408_Smad2_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 5.76 0.00 0 1 7 2 1172.00183 2342.99639 5.09 41.28 5105 5105 MS2 25/52 Linfeng_20130405_rIgG3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 5.74 0.00 0 0 40 2 1041.99268 2082.97807 6.33 41.24 4851 4851 MS2 23/32 Linfeng_20130408_Smad2_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 99 5.74 0.00 0 12 29 2 899.01373 1797.02019 4.71 42.10 4877 4877 MS2 22/30 Linfeng_20130408_Smad2_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 102 5.71 0.00 0 3 50 2 899.01331 1797.01933 4.24 42.28 5238 5238 MS2 24/30 Linfeng_20130408_Smad2_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 5.59 0.00 0 0 10 2 1171.99854 2342.98979 2.27 41.15 5024 5024 MS2 23/52 Linfeng_20130408_Smad2_5.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 P13645 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 5.53 0.00 0 6 9 3 916.14990 2746.43515 5.76 43.23 6278 6278 MS2 34/88 Linfeng_20130405_rIgG5.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 100 5.49 0.00 0 3 2 2 899.01379 1797.02031 4.78 42.35 5562 5562 MS2 24/30 Linfeng_20130405_rIgG2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 41 5.48 0.00 0 0 6 2 1172.00244 2342.99761 5.61 41.26 4974 4974 MS2 27/52 Linfeng_20130405_rIgG1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 5.47 0.00 0 2 7 2 1041.98792 2082.96855 1.76 41.18 5033 5033 MS2 23/32 Linfeng_20130408_Smad2_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 92 5.45 0.00 0 17 42 2 899.01367 1797.02007 4.64 42.22 5078 5078 MS2 25/30 Linfeng_20130408_Smad2_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 44 5.40 0.00 0 0 50 2 1172.00330 2342.99932 6.34 41.21 4842 4842 MS2 26/52 Linfeng_20130408_Smad2_3.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 189 5.38 0.00 0 0 32 2 1056.53064 2112.05400 5.79 43.49 6198 6198 MS2 24/34 Linfeng_20130405_rIgG4.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 97 5.36 0.00 0 4 2 3 599.67810 1797.01975 4.47 42.31 5530 5530 MS2 32/60 Linfeng_20130405_rIgG3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 5.35 0.00 0 0 17 2 1041.99023 2082.97319 3.98 41.31 5115 5115 MS2 23/32 Linfeng_20130405_rIgG6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 162 5.34 0.00 0 0 4 2 1041.98987 2082.97246 3.63 41.28 4984 4984 MS2 23/32 Linfeng_20130405_rIgG1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 5.32 0.00 0 2 2 2 1041.98926 2082.97124 3.05 41.31 5119 5119 MS2 22/32 Linfeng_20130405_rIgG3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 192 5.30 0.00 0 7 50 2 998.99615 1996.98503 7.02 40.83 4508 4508 MS2 20/32 Linfeng_20130408_Smad2_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 92 5.29 0.00 0 11 9 2 899.01569 1797.02410 6.89 42.38 5432 5432 MS2 22/30 Linfeng_20130405_rIgG1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 5.29 0.00 0 44 9 3 781.67096 2342.99833 5.92 41.26 5099 5099 MS2 44/104 Linfeng_20130405_rIgG3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 5.29 0.00 0 6 26 2 1041.99109 2082.97490 4.80 41.21 4705 4705 MS2 22/32 Linfeng_20130408_Smad2_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 5.24 0.00 0 13 50 2 1172.00549 2343.00371 8.21 41.26 4657 4657 MS2 24/52 Linfeng_20130408_Smad2_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 186 5.23 0.00 0 6 24 2 998.99316 1996.97905 4.02 41.47 5078 5078 MS2 21/32 Linfeng_20130408_Smad2_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 197 5.23 0.00 0 3 37 2 998.99359 1996.97991 4.45 41.43 4621 4621 MS2 21/32 Linfeng_20130408_Smad2_10.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 197 5.22 0.00 0 3 6 2 998.99567 1996.98406 6.53 41.65 5247 5247 MS2 22/32 Linfeng_20130405_rIgG6.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 177 5.20 0.00 0 0 32 3 789.76324 2367.27518 5.25 42.34 5123 5123 MS2 36/80 Linfeng_20130408_Smad2_6.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 193 5.17 0.00 0 2 50 2 1056.53052 2112.05376 5.67 43.43 5469 5469 MS2 22/34 Linfeng_20130408_Smad2_6.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 205 5.12 0.00 0 0 50 2 1056.53052 2112.05376 5.67 43.31 5262 5262 MS2 25/34 Linfeng_20130408_Smad2_10.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 171 5.11 0.00 0 1 49 2 1041.99475 2082.98223 8.32 41.25 4656 4656 MS2 23/32 Linfeng_20130408_Smad2_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 185 5.10 0.00 0 0 17 2 998.99310 1996.97893 3.96 41.56 4830 4830 MS2 21/32 Linfeng_20130408_Smad2_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 103 5.10 0.00 0 15 3 2 899.01477 1797.02226 5.87 42.36 5929 5929 MS2 23/30 Linfeng_20130405_rIgG5.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 209 5.06 0.00 0 0 50 2 1056.53149 2112.05571 6.60 43.41 5693 5693 MS2 23/34 Linfeng_20130408_Smad2_4.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 201 5.05 0.00 0 3 50 2 1056.52893 2112.05058 4.17 43.47 5994 5994 MS2 25/34 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 205 5.03 0.00 0 5 3 2 998.99390 1996.98052 4.75 41.64 5270 5270 MS2 24/32 Linfeng_20130405_rIgG2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 P13645 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 5.00 0.00 0 0 50 3 916.15027 2746.43625 6.16 43.17 5408 5408 MS2 32/88 Linfeng_20130408_Smad2_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 235 5.00 0.00 0 4 2 3 666.33173 1996.98062 4.81 41.65 5254 5254 MS2 34/64 Linfeng_20130405_rIgG3.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 205 4.99 0.00 0 0 50 2 1056.52979 2112.05229 4.98 43.38 5866 5866 MS2 25/34 Linfeng_20130408_Smad2_5.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 189 4.98 0.00 0 6 21 2 1056.53015 2112.05303 5.33 43.48 6411 6411 MS2 24/34 Linfeng_20130405_rIgG8.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 123 4.96 0.00 0 4 31 2 854.39691 1707.78655 8.38 40.43 4677 4677 MS2 23/36 Linfeng_20130408_Smad2_4.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 202 4.96 0.00 0 15 39 2 1056.52893 2112.05058 4.17 43.48 6359 6359 MS2 25/34 Linfeng_20130405_rIgG5.raw High NVQALEIELQSQLALK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 103 4.93 0.00 0 8 12 2 899.01465 1797.02202 5.73 42.37 5794 5794 MS2 21/30 Linfeng_20130405_rIgG4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 254 4.92 0.00 0 0 2 3 958.13916 2872.40293 3.48 42.78 5743 5743 MS2 36/104 Linfeng_20130405_rIgG2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 4.91 0.00 0 35 12 3 694.99652 2082.97501 4.86 41.29 5111 5111 MS2 34/64 Linfeng_20130405_rIgG3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 179 4.91 0.00 0 2 22 3 789.76294 2367.27427 4.86 42.35 5352 5352 MS2 34/80 Linfeng_20130408_Smad2_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 223 4.89 0.00 0 1 7 3 968.80450 2904.39896 5.58 41.94 4896 4896 MS2 29/104 Linfeng_20130408_Smad2_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 223 4.86 0.00 0 4 13 3 968.80414 2904.39786 5.20 41.86 4866 4866 MS2 31/104 Linfeng_20130408_Smad2_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 259 4.81 0.00 1 5 32 3 738.04089 2212.10813 4.57 39.82 4465 4465 MS2 33/72 Linfeng_20130405_rIgG1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 4.80 0.00 0 11 9 3 694.99530 2082.97135 3.10 41.20 5040 5040 MS2 31/64 Linfeng_20130408_Smad2_5.raw High ISSSKGSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 220 4.80 0.00 1 24 17 3 737.35596 2210.05332 2.70 39.44 4459 4459 MS2 37/92 Linfeng_20130405_rIgG3.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 200 4.79 0.00 0 0 50 2 1056.52954 2112.05181 4.75 43.45 5609 5609 MS2 23/34 Linfeng_20130408_Smad2_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 185 4.77 0.00 0 1 3 2 998.99426 1996.98125 5.12 41.67 5168 5168 MS2 23/32 Linfeng_20130405_rIgG7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 170 4.77 0.00 0 19 6 3 694.99628 2082.97428 4.50 41.30 5132 5132 MS2 33/64 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 195 4.76 0.00 0 5 2 2 998.99390 1996.98052 4.75 41.64 5679 5679 MS2 22/32 Linfeng_20130405_rIgG8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 163 4.76 0.00 0 15 7 3 694.99573 2082.97263 3.71 41.27 5487 5487 MS2 31/64 Linfeng_20130405_rIgG5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 127 4.76 0.00 0 7 10 2 854.39410 1707.78093 5.09 40.45 4776 4776 MS2 22/36 Linfeng_20130408_Smad2_5.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 200 4.75 0.00 0 0 50 2 1056.53040 2112.05351 5.56 43.52 5955 5955 MS2 25/34 Linfeng_20130405_rIgG3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.72 0.00 0 4 50 2 775.34564 1549.68401 4.32 34.07 3044 3044 MS2 26/38 Linfeng_20130405_rIgG5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 124 4.72 0.00 0 3 37 2 854.39520 1707.78313 6.38 40.53 4682 4682 MS2 24/36 Linfeng_20130408_Smad2_1.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 229 4.70 0.00 0 5 5 3 704.68835 2112.05051 4.14 43.49 6000 6000 MS2 31/68 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 203 4.69 0.00 0 1 17 2 998.99719 1996.98711 8.06 41.49 5207 5207 MS2 22/32 Linfeng_20130408_Smad2_8.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 86 4.68 0.00 0 9 50 2 775.34833 1549.68938 7.79 34.17 2729 2729 MS2 22/38 Linfeng_20130408_Smad2_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 193 4.67 0.00 0 5 50 2 998.99823 1996.98918 9.09 40.90 4537 4537 MS2 21/32 Linfeng_20130408_Smad2_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 225 4.66 0.00 0 1 4 3 968.80414 2904.39786 5.20 41.85 5169 5169 MS2 30/104 Linfeng_20130408_Smad2_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 123 4.63 0.00 0 0 50 2 854.39532 1707.78337 6.52 40.44 4449 4449 MS2 23/36 Linfeng_20130408_Smad2_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 125 4.63 0.00 0 1 34 2 854.39551 1707.78374 6.74 40.30 4668 4668 MS2 23/36 Linfeng_20130408_Smad2_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 120 4.62 0.00 0 3 50 2 854.39532 1707.78337 6.52 40.16 4188 4188 MS2 24/36 Linfeng_20130408_Smad2_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 M11(Oxidation) CID 1.0000 0.0000 1 1 178 4.62 0.00 0 0 12 2 1444.70386 2888.40044 4.36 42.62 5529 5529 MS2 17/52 Linfeng_20130405_rIgG1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 127 4.59 0.00 0 17 50 2 854.39569 1707.78411 6.95 40.55 4423 4423 MS2 24/36 Linfeng_20130408_Smad2_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 126 4.58 0.00 0 17 38 2 854.39374 1707.78020 4.67 40.31 4781 4781 MS2 24/36 Linfeng_20130408_Smad2_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 164 4.58 0.00 0 20 24 3 694.99597 2082.97336 4.06 41.21 4706 4706 MS2 29/64 Linfeng_20130408_Smad2_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 123 4.58 0.00 0 7 50 2 854.39453 1707.78179 5.59 40.44 4380 4380 MS2 24/36 Linfeng_20130408_Smad2_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 115 4.57 0.00 0 4 12 2 854.39368 1707.78008 4.59 40.60 4755 4755 MS2 25/36 Linfeng_20130405_rIgG7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 222 4.57 0.00 1 3 22 2 1106.55396 2212.10063 1.18 41.20 4980 4980 MS2 19/36 Linfeng_20130405_rIgG7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 226 4.56 0.00 0 3 6 3 968.80261 2904.39328 3.63 41.95 5286 5286 MS2 35/104 Linfeng_20130405_rIgG7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 214 4.56 0.00 0 15 6 2 998.99286 1996.97844 3.72 41.69 5517 5517 MS2 20/32 Linfeng_20130405_rIgG9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 197 4.53 0.00 0 0 50 2 998.99622 1996.98516 7.08 40.80 4798 4798 MS2 20/32 Linfeng_20130408_Smad2_4.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 231 4.52 0.00 0 5 18 3 704.68921 2112.05307 5.35 43.49 6197 6197 MS2 30/68 Linfeng_20130405_rIgG4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 198 4.51 0.00 0 17 3 2 998.99475 1996.98223 5.61 41.63 5633 5633 MS2 21/32 Linfeng_20130405_rIgG5.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 233 4.50 0.00 0 2 19 3 704.68866 2112.05143 4.57 43.50 6362 6362 MS2 29/68 Linfeng_20130405_rIgG5.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 86 4.49 0.00 0 0 50 2 775.34827 1549.68926 7.71 34.19 2790 2790 MS2 24/38 Linfeng_20130405_rIgG3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 119 4.48 0.00 0 19 50 2 854.39490 1707.78252 6.02 40.61 4733 4733 MS2 23/36 Linfeng_20130405_rIgG1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 125 4.47 0.00 0 7 24 2 854.39417 1707.78105 5.17 40.60 4851 4851 MS2 24/36 Linfeng_20130405_rIgG6.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 234 4.46 0.00 0 7 7 3 704.68866 2112.05143 4.57 43.47 6409 6409 MS2 27/68 Linfeng_20130405_rIgG8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 223 4.46 0.00 0 2 4 3 968.80402 2904.39750 5.08 41.94 5379 5379 MS2 34/104 Linfeng_20130405_rIgG3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 90 4.44 0.00 0 10 50 2 775.34741 1549.68755 6.61 33.92 2918 2918 MS2 21/38 Linfeng_20130405_rIgG4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 113 4.44 0.00 0 4 14 2 854.39349 1707.77971 4.38 40.64 4647 4647 MS2 24/36 Linfeng_20130405_rIgG10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 224 4.44 0.00 0 0 4 3 968.80438 2904.39859 5.45 41.89 5091 5091 MS2 30/104 Linfeng_20130408_Smad2_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 238 4.42 0.00 0 7 14 3 666.33209 1996.98172 5.36 41.56 4760 4760 MS2 33/64 Linfeng_20130408_Smad2_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 108 4.42 0.00 0 3 13 2 854.39319 1707.77910 4.02 40.64 5100 5100 MS2 24/36 Linfeng_20130405_rIgG4.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 92 4.39 0.00 0 7 50 2 775.34766 1549.68804 6.92 34.18 2863 2863 MS2 22/38 Linfeng_20130405_rIgG2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 114 4.38 0.00 0 10 6 2 854.39349 1707.77971 4.38 40.59 5232 5232 MS2 24/36 Linfeng_20130405_rIgG5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 M11(Oxidation) CID 1.0000 0.0000 1 1 236 4.37 0.00 0 2 6 3 963.47205 2888.40158 4.76 42.52 5562 5562 MS2 35/104 Linfeng_20130408_Smad2_5.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 233 4.36 0.00 0 18 50 3 704.68823 2112.05014 3.96 43.28 5256 5256 MS2 33/68 Linfeng_20130408_Smad2_10.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 234 4.29 0.00 0 13 50 3 704.68860 2112.05124 4.48 43.38 5865 5865 MS2 32/68 Linfeng_20130408_Smad2_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 M11(Oxidation) CID 1.0000 0.0000 1 1 234 4.26 0.00 0 1 2 3 963.47205 2888.40158 4.76 42.59 5644 5644 MS2 34/104 Linfeng_20130405_rIgG3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 224 4.23 0.00 0 0 4 3 968.80383 2904.39695 4.89 41.92 5196 5196 MS2 28/104 Linfeng_20130408_Smad2_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 119 4.23 0.00 0 1 50 2 854.39471 1707.78215 5.81 40.48 4599 4599 MS2 23/36 Linfeng_20130408_Smad2_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 186 4.20 0.00 0 11 27 2 998.99579 1996.98430 6.65 40.90 4839 4839 MS2 21/32 Linfeng_20130405_rIgG1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 221 4.17 0.00 0 2 2 3 968.80457 2904.39914 5.64 41.97 5264 5264 MS2 31/104 Linfeng_20130405_rIgG1.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 89 4.10 0.00 0 14 50 2 775.34814 1549.68901 7.55 33.88 2572 2572 MS2 22/38 Linfeng_20130408_Smad2_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 236 4.06 0.00 0 7 9 3 666.33173 1996.98062 4.81 41.53 5053 5053 MS2 32/64 Linfeng_20130408_Smad2_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 228 4.06 0.00 0 1 9 3 968.80359 2904.39621 4.64 41.80 5201 5201 MS2 32/104 Linfeng_20130408_Smad2_9.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 M11(Oxidation) CID 1.0000 0.0000 1 1 247 4.06 0.00 0 1 3 3 963.47144 2888.39975 4.13 42.60 5524 5524 MS2 36/104 Linfeng_20130405_rIgG1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 112 4.04 0.00 0 8 39 2 854.39294 1707.77861 3.74 40.59 4847 4847 MS2 22/36 Linfeng_20130405_rIgG3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 229 4.04 0.00 0 5 20 3 968.80334 2904.39548 4.38 41.80 5331 5331 MS2 28/104 Linfeng_20130408_Smad2_8.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 247 4.03 0.00 0 20 50 3 699.35669 2096.05552 4.13 43.43 6397 6397 MS2 32/68 Linfeng_20130405_rIgG8.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 227 4.01 0.00 0 18 50 3 704.68829 2112.05033 4.05 43.45 5608 5608 MS2 30/68 Linfeng_20130408_Smad2_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 88 4.00 0.00 0 26 50 2 775.34808 1549.68889 7.48 33.83 2380 2380 MS2 20/38 Linfeng_20130408_Smad2_10.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 92 3.99 0.00 0 0 50 2 775.34735 1549.68743 6.53 34.21 2753 2753 MS2 24/38 Linfeng_20130405_rIgG1.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 3.97 0.00 0 16 50 2 775.34888 1549.69048 8.50 34.24 2560 2560 MS2 17/38 Linfeng_20130408_Smad2_2.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 174 3.97 0.00 0 12 50 2 683.32581 1365.64433 3.63 35.36 3216 3216 MS2 16/20 Linfeng_20130408_Smad2_8.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 281 3.94 0.00 1 7 50 3 738.04260 2212.11325 6.89 39.84 4505 4505 MS2 34/72 Linfeng_20130405_rIgG7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 164 3.93 0.00 0 12 8 3 694.99500 2082.97043 2.66 41.33 5124 5124 MS2 26/64 Linfeng_20130405_rIgG6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 113 3.93 0.00 0 15 6 2 854.39307 1707.77886 3.88 40.66 5119 5119 MS2 23/36 Linfeng_20130405_rIgG9.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 169 3.93 0.00 0 7 30 2 683.32416 1365.64104 1.22 35.65 3163 3163 MS2 17/20 Linfeng_20130408_Smad2_1.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 229 3.93 0.00 0 2 29 3 704.68939 2112.05362 5.61 43.53 5840 5840 MS2 27/68 Linfeng_20130405_rIgG1.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 221 3.93 0.00 1 1 8 2 717.89185 1434.77641 4.47 38.38 3975 3975 MS2 17/20 Linfeng_20130405_rIgG1.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 233 3.91 0.00 1 7 49 2 717.89410 1434.78093 7.62 38.19 3913 3913 MS2 17/20 Linfeng_20130408_Smad2_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 258 3.91 0.00 1 12 32 3 738.04041 2212.10666 3.91 39.85 4595 4595 MS2 27/72 Linfeng_20130405_rIgG3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 P13645 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 49 3.90 0.00 0 26 32 3 781.66962 2342.99430 4.20 41.17 4691 4691 MS2 33/104 Linfeng_20130408_Smad2_6.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 227 3.90 0.00 1 21 50 2 717.89063 1434.77397 2.77 38.36 3868 3868 MS2 17/20 Linfeng_20130405_rIgG10.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 199 3.89 0.00 1 8 11 2 717.89209 1434.77690 4.81 38.28 4088 4088 MS2 17/20 Linfeng_20130405_rIgG2.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 184 3.88 0.00 1 8 50 2 717.89392 1434.78057 7.36 38.01 3974 3974 MS2 17/20 Linfeng_20130408_Smad2_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 192 3.88 0.00 0 6 15 2 998.99420 1996.98113 5.06 40.92 4968 4968 MS2 17/32 Linfeng_20130405_rIgG3.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 163 3.87 0.00 0 15 50 2 683.32489 1365.64250 2.29 35.67 2961 2961 MS2 17/20 Linfeng_20130408_Smad2_2.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 231 3.86 0.00 0 23 50 3 704.68829 2112.05033 4.05 43.34 5916 5916 MS2 27/68 Linfeng_20130408_Smad2_8.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 172 3.86 0.00 0 6 13 2 691.33087 1381.65447 4.52 37.29 3933 3933 MS2 18/22 Linfeng_20130405_rIgG9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 120 3.85 0.00 0 7 11 2 854.39368 1707.78008 4.59 40.57 4857 4857 MS2 22/36 Linfeng_20130405_rIgG2.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 231 3.85 0.00 1 9 50 2 717.89508 1434.78288 8.98 37.98 3891 3891 MS2 17/20 Linfeng_20130408_Smad2_9.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 215 3.84 0.00 1 23 8 2 717.89117 1434.77507 3.53 38.23 4340 4340 MS2 17/20 Linfeng_20130405_rIgG5.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 230 3.84 0.00 1 16 23 2 717.89160 1434.77593 4.13 38.28 4259 4259 MS2 17/20 Linfeng_20130405_rIgG9.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 3.82 0.00 0 8 15 3 694.99664 2082.97538 5.03 41.37 5383 5383 MS2 27/64 Linfeng_20130405_rIgG4.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 192 3.80 0.00 1 12 50 2 717.89319 1434.77910 6.34 38.15 3662 3662 MS2 17/20 Linfeng_20130408_Smad2_7.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 206 3.80 0.00 1 13 50 2 717.89319 1434.77910 6.34 38.27 3696 3696 MS2 17/20 Linfeng_20130408_Smad2_2.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 164 3.79 0.00 0 18 50 2 683.32562 1365.64397 3.37 35.38 3056 3056 MS2 17/20 Linfeng_20130408_Smad2_9.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 229 3.79 0.00 1 16 42 2 717.89160 1434.77593 4.13 38.30 4059 4059 MS2 17/20 Linfeng_20130405_rIgG3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 260 3.78 0.00 1 24 17 3 738.04138 2212.10959 5.23 39.83 4617 4617 MS2 29/72 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 185 3.76 0.00 0 0 47 2 998.99347 1996.97966 4.33 40.80 4903 4903 MS2 20/32 Linfeng_20130408_Smad2_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 223 3.75 0.00 0 2 4 3 968.80402 2904.39750 5.08 41.97 5627 5627 MS2 27/104 Linfeng_20130405_rIgG4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 228 3.75 0.00 0 0 12 3 968.80347 2904.39585 4.51 41.87 4942 4942 MS2 30/104 Linfeng_20130408_Smad2_6.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 172 3.74 0.00 0 30 50 2 683.32635 1365.64543 4.44 35.47 3133 3133 MS2 17/20 Linfeng_20130408_Smad2_4.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 165 3.73 0.00 0 0 50 2 691.33099 1381.65471 4.70 36.80 3206 3206 MS2 17/22 Linfeng_20130408_Smad2_10.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 171 3.73 0.00 0 1 18 2 691.33112 1381.65495 4.87 37.30 3745 3745 MS2 18/22 Linfeng_20130405_rIgG6.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 166 3.72 0.00 0 1 5 2 691.33057 1381.65386 4.08 37.19 4040 4040 MS2 18/22 Linfeng_20130405_rIgG8.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 169 3.71 0.00 0 0 19 2 683.32410 1365.64092 1.13 35.69 3177 3177 MS2 17/20 Linfeng_20130405_rIgG1.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 197 3.71 0.00 1 27 50 2 717.89368 1434.78008 7.02 38.18 3853 3853 MS2 17/20 Linfeng_20130408_Smad2_3.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 163 3.71 0.00 0 14 50 2 683.32452 1365.64177 1.76 35.55 2932 2932 MS2 17/20 Linfeng_20130408_Smad2_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 110 3.70 0.00 0 36 9 2 854.39331 1707.77934 4.17 40.58 5253 5253 MS2 23/36 Linfeng_20130405_rIgG8.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 165 3.70 0.00 0 14 6 3 789.76581 2367.28287 8.49 42.47 5471 5471 MS2 27/80 Linfeng_20130405_rIgG1.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 194 3.70 0.00 1 4 12 3 412.23370 1234.68656 6.07 36.76 3524 3524 MS2 20/36 Linfeng_20130408_Smad2_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 222 3.70 0.00 0 1 2 3 968.80457 2904.39914 5.64 41.95 5398 5398 MS2 30/104 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 180 3.70 0.00 0 27 21 2 998.99323 1996.97917 4.08 40.94 5214 5214 MS2 16/32 Linfeng_20130405_rIgG4.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 165 3.69 0.00 0 9 37 2 683.32489 1365.64250 2.29 35.73 3423 3423 MS2 17/20 Linfeng_20130405_rIgG9.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 151 3.69 0.00 0 0 29 2 683.32373 1365.64018 0.60 35.74 3100 3100 MS2 17/20 Linfeng_20130405_rIgG10.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 166 3.69 0.00 0 18 50 2 683.32574 1365.64421 3.55 35.59 3101 3101 MS2 17/20 Linfeng_20130408_Smad2_3.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 163 3.69 0.00 0 8 50 2 691.33215 1381.65703 6.38 37.11 3450 3450 MS2 18/22 Linfeng_20130408_Smad2_6.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 214 3.66 0.00 0 2 8 3 968.79962 2904.38431 0.54 41.84 5288 5288 MS2 30/104 Linfeng_20130408_Smad2_5.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 197 3.65 0.00 1 39 50 2 717.89209 1434.77690 4.81 38.37 4081 4081 MS2 17/20 Linfeng_20130405_rIgG6.raw High ISSSKGSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 230 3.65 0.00 1 33 37 3 737.35681 2210.05588 3.86 39.44 4488 4488 MS2 32/92 Linfeng_20130405_rIgG2.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 169 3.65 0.00 0 11 35 2 683.32416 1365.64104 1.22 35.64 3309 3309 MS2 17/20 Linfeng_20130405_rIgG2.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 173 3.64 0.00 0 10 50 2 691.33264 1381.65801 7.08 37.09 3404 3404 MS2 17/22 Linfeng_20130408_Smad2_7.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 232 3.64 0.00 0 23 50 3 704.68903 2112.05252 5.09 43.50 6209 6209 MS2 27/68 Linfeng_20130405_rIgG9.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 167 3.62 0.00 0 12 27 2 691.33099 1381.65471 4.70 37.24 3813 3813 MS2 18/22 Linfeng_20130405_rIgG2.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 165 3.62 0.00 0 1 23 2 691.33032 1381.65337 3.72 37.31 3600 3600 MS2 18/22 Linfeng_20130405_rIgG10.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 165 3.61 0.00 0 0 30 2 683.32483 1365.64238 2.20 35.63 3496 3496 MS2 17/20 Linfeng_20130405_rIgG8.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 209 3.60 0.00 1 36 50 2 717.89551 1434.78374 9.57 38.10 3926 3926 MS2 16/20 Linfeng_20130408_Smad2_4.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 164 3.59 0.00 0 23 50 2 691.33325 1381.65923 7.97 37.00 3605 3605 MS2 17/22 Linfeng_20130408_Smad2_4.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 247 3.58 0.00 0 6 28 3 704.69043 2112.05674 7.08 43.49 5946 5946 MS2 25/68 Linfeng_20130405_rIgG3.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 176 3.58 0.00 0 8 30 2 683.32416 1365.64104 1.22 35.59 3516 3516 MS2 17/20 Linfeng_20130405_rIgG5.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 228 3.58 0.00 1 25 17 2 717.89185 1434.77641 4.47 38.18 4340 4340 MS2 17/20 Linfeng_20130405_rIgG8.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 159 3.56 0.00 0 2 19 2 691.33154 1381.65581 5.49 37.25 3766 3766 MS2 18/22 Linfeng_20130405_rIgG3.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 157 3.56 0.00 0 11 20 2 683.32538 1365.64348 3.01 35.65 3243 3243 MS2 17/20 Linfeng_20130405_rIgG3.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 250 3.54 0.00 0 12 50 2 583.30072 1165.59416 8.02 36.30 3356 3356 MS2 15/16 Linfeng_20130408_Smad2_9.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 175 3.54 0.00 0 0 42 2 691.33087 1381.65447 4.52 37.25 3668 3668 MS2 18/22 Linfeng_20130405_rIgG1.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 206 3.54 0.00 1 11 50 2 717.89258 1434.77788 5.49 38.33 3997 3997 MS2 17/20 Linfeng_20130405_rIgG7.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 173 3.54 0.00 0 13 50 2 691.33234 1381.65740 6.64 37.06 3690 3690 MS2 18/22 Linfeng_20130408_Smad2_5.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 231 3.53 0.00 1 3 50 2 1106.55786 2212.10845 4.71 41.06 4881 4881 MS2 19/36 Linfeng_20130408_Smad2_4.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 226 3.53 0.00 1 36 37 2 717.89185 1434.77641 4.47 38.31 4297 4297 MS2 17/20 Linfeng_20130405_rIgG4.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 170 3.52 0.00 0 4 50 2 683.32721 1365.64714 5.69 35.26 2754 2754 MS2 17/20 Linfeng_20130408_Smad2_10.raw High NVSTGDVNVEmNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 M11(Oxidation) CID 1.0000 0.0000 1 1 246 3.51 0.00 0 0 1 3 963.47131 2888.39939 4.00 42.59 5665 5665 MS2 33/104 Linfeng_20130405_rIgG2.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 251 3.50 0.00 0 19 3 2 583.29700 1165.58672 1.64 36.54 3807 3807 MS2 15/16 Linfeng_20130405_rIgG5.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 255 3.48 0.00 0 10 50 2 583.30103 1165.59477 8.55 36.42 3423 3423 MS2 15/16 Linfeng_20130408_Smad2_4.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 278 3.47 0.00 0 3 12 2 583.29852 1165.58977 4.25 36.63 3615 3615 MS2 15/16 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 204 3.47 0.00 0 34 50 2 998.99524 1996.98320 6.10 40.64 4653 4653 MS2 17/32 Linfeng_20130408_Smad2_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 88 3.46 0.00 0 20 50 2 775.34924 1549.69121 8.97 34.01 2780 2780 MS2 20/38 Linfeng_20130408_Smad2_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 242 3.46 0.00 0 8 11 3 958.14172 2872.41062 6.16 42.82 6124 6124 MS2 31/104 Linfeng_20130405_rIgG5.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 168 3.45 0.00 0 19 50 2 683.32568 1365.64409 3.46 35.68 3241 3241 MS2 17/20 Linfeng_20130405_rIgG6.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 279 3.43 0.00 0 14 50 2 583.29999 1165.59270 6.77 36.26 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_8.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 228 3.42 0.00 1 19 50 2 717.89490 1434.78252 8.72 37.81 3444 3444 MS2 17/20 Linfeng_20130408_Smad2_10.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 193 3.41 0.00 1 4 7 3 412.23340 1234.68564 5.33 36.90 3649 3649 MS2 19/36 Linfeng_20130405_rIgG3.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 174 3.41 0.00 0 38 50 2 683.32629 1365.64531 4.35 35.52 2959 2959 MS2 16/20 Linfeng_20130408_Smad2_6.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 267 3.37 0.00 0 16 50 2 583.29858 1165.58989 4.36 36.63 3469 3469 MS2 15/16 Linfeng_20130405_rIgG1.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 254 3.37 0.00 0 3 18 2 583.29895 1165.59062 4.99 36.64 3561 3561 MS2 15/16 Linfeng_20130405_rIgG3.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 184 3.37 0.00 1 25 50 2 617.84747 1234.68767 6.97 36.54 3434 3434 MS2 16/18 Linfeng_20130408_Smad2_9.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 P13645 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 85 3.37 0.00 0 19 50 2 775.34900 1549.69072 8.66 34.16 2686 2686 MS2 20/38 Linfeng_20130408_Smad2_3.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 162 3.36 0.00 0 0 48 2 691.33026 1381.65325 3.64 36.91 3714 3714 MS2 18/22 Linfeng_20130408_Smad2_8.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 180 3.36 0.00 0 4 50 2 691.33276 1381.65825 7.26 36.94 3570 3570 MS2 18/22 Linfeng_20130408_Smad2_9.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 216 3.36 0.00 0 4 9 2 516.30457 1031.60185 3.40 40.25 4637 4637 MS2 15/16 Linfeng_20130405_rIgG7.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 171 3.36 0.00 0 16 50 2 683.32446 1365.64165 1.67 35.64 3179 3179 MS2 17/20 Linfeng_20130405_rIgG7.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 174 3.35 0.00 0 4 50 2 683.32648 1365.64568 4.62 35.41 3196 3196 MS2 16/20 Linfeng_20130408_Smad2_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 P13645 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 3.34 0.00 0 2 5 3 694.99805 2082.97959 7.05 41.31 4997 4997 MS2 28/64 Linfeng_20130405_rIgG1.raw High SQYEQLAEQNR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 162 3.32 0.00 0 4 30 2 683.32513 1365.64299 2.65 35.66 3452 3452 MS2 17/20 Linfeng_20130405_rIgG4.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 206 3.27 0.00 0 6 1 2 516.30469 1031.60210 3.63 40.27 5102 5102 MS2 15/16 Linfeng_20130405_rIgG5.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 280 3.26 0.00 0 24 29 2 583.29840 1165.58953 4.04 36.56 3823 3823 MS2 15/16 Linfeng_20130405_rIgG8.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 172 3.25 0.00 1 25 50 2 617.84796 1234.68865 7.76 36.67 3315 3315 MS2 17/18 Linfeng_20130408_Smad2_6.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 189 3.25 0.00 1 24 50 2 617.84637 1234.68547 5.19 36.45 3570 3570 MS2 16/18 Linfeng_20130408_Smad2_8.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 178 3.24 0.00 1 9 4 3 412.23318 1234.68500 4.81 36.93 3564 3564 MS2 20/36 Linfeng_20130405_rIgG1.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 164 3.23 0.00 0 0 23 2 691.33051 1381.65373 3.99 37.23 4013 4013 MS2 18/22 Linfeng_20130405_rIgG5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 250 3.22 0.00 0 6 2 3 666.33228 1996.98227 5.63 41.65 5276 5276 MS2 24/64 Linfeng_20130405_rIgG2.raw High IRLENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 238 3.22 0.00 1 12 1 3 478.92993 1434.77524 3.65 38.31 4098 4098 MS2 21/40 Linfeng_20130405_rIgG2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 232 3.22 0.00 0 22 19 3 666.33167 1996.98044 4.72 41.58 4839 4839 MS2 24/64 Linfeng_20130408_Smad2_6.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 239 3.21 0.00 0 8 3 2 601.31458 1201.62187 3.89 38.91 4617 4617 MS2 17/20 Linfeng_20130405_rIgG8.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 212 3.21 0.00 1 23 35 2 617.84534 1234.68340 3.51 36.74 3885 3885 MS2 16/18 Linfeng_20130405_rIgG8.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 276 3.21 0.00 0 19 37 2 583.29797 1165.58867 3.31 36.64 3540 3540 MS2 15/16 Linfeng_20130405_rIgG6.raw High ADLEmQIESLTEELAYLKK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 247 3.21 0.00 1 4 50 3 747.38782 2240.14890 5.42 42.79 5283 5283 MS2 26/72 Linfeng_20130408_Smad2_6.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 245 3.20 0.00 0 5 50 2 583.29895 1165.59062 4.99 36.69 3393 3393 MS2 15/16 Linfeng_20130405_rIgG10.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 162 3.19 0.00 0 24 44 2 691.33069 1381.65410 4.26 37.28 3979 3979 MS2 17/22 Linfeng_20130405_rIgG4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 P13645 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 222 3.19 0.00 0 6 11 3 968.80402 2904.39750 5.08 41.97 5376 5376 MS2 32/104 Linfeng_20130405_rIgG6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 124 3.19 0.00 0 19 9 3 569.93097 1707.77835 3.59 40.63 4863 4863 MS2 29/72 Linfeng_20130405_rIgG3.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 151 3.17 0.00 0 5 50 2 516.30719 1031.60710 8.48 40.01 4243 4243 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 141 3.17 0.00 1 22 36 2 532.81140 1064.61553 5.27 37.27 3822 3822 MS2 13/16 Linfeng_20130405_rIgG2.raw High ADLEmQIESLTEELAYLKK Unambiguous 1 1 P13645 M5(Oxidation) CID 1.0000 0.0000 1 1 248 3.17 0.00 1 18 12 3 747.38770 2240.14853 5.26 42.87 6146 6146 MS2 28/72 Linfeng_20130405_rIgG5.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 243 3.16 0.00 0 3 50 2 583.30066 1165.59404 7.92 36.47 3209 3209 MS2 15/16 Linfeng_20130408_Smad2_7.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 169 3.16 0.00 0 15 50 2 691.33258 1381.65788 6.99 37.13 3646 3646 MS2 17/22 Linfeng_20130408_Smad2_1.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 254 3.16 0.00 0 9 18 2 583.29877 1165.59026 4.67 36.69 3736 3736 MS2 15/16 Linfeng_20130405_rIgG9.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 245 3.16 0.00 1 4 50 2 747.37585 1493.74443 6.76 34.40 2928 2928 MS2 15/22 Linfeng_20130405_rIgG2.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 254 3.15 0.00 0 31 45 2 601.31421 1201.62114 3.28 37.86 3593 3593 MS2 18/20 Linfeng_20130408_Smad2_2.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 174 3.14 0.00 0 7 50 2 691.33301 1381.65874 7.61 37.10 3562 3562 MS2 16/22 Linfeng_20130408_Smad2_3.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 253 3.14 0.00 1 4 50 2 747.37634 1493.74541 7.41 34.45 2883 2883 MS2 15/22 Linfeng_20130405_rIgG6.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 277 3.12 0.00 0 10 12 2 583.29828 1165.58928 3.83 36.64 3771 3771 MS2 15/16 Linfeng_20130405_rIgG4.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 161 3.12 0.00 0 4 49 2 516.30505 1031.60283 4.34 39.98 4621 4621 MS2 14/16 Linfeng_20130408_Smad2_5.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 209 3.09 0.00 1 29 36 2 617.84534 1234.68340 3.51 36.92 3862 3862 MS2 16/18 Linfeng_20130405_rIgG4.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 172 3.09 0.00 0 6 15 2 516.30487 1031.60246 3.99 40.24 4726 4726 MS2 14/16 Linfeng_20130405_rIgG6.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 180 3.08 0.00 1 3 50 2 617.84778 1234.68828 7.47 36.76 3456 3456 MS2 17/18 Linfeng_20130408_Smad2_3.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 175 3.07 0.00 0 14 50 2 691.33276 1381.65825 7.26 37.15 3412 3412 MS2 16/22 Linfeng_20130408_Smad2_2.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 194 3.07 0.00 1 16 50 2 617.84839 1234.68950 8.46 36.66 3498 3498 MS2 16/18 Linfeng_20130408_Smad2_4.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 254 3.06 0.00 1 8 16 2 747.37299 1493.73870 2.91 34.37 3125 3125 MS2 17/22 Linfeng_20130405_rIgG5.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 256 3.06 0.00 1 16 50 2 747.37683 1493.74639 8.06 34.40 2857 2857 MS2 15/22 Linfeng_20130405_rIgG3.raw High ALEESNYELEGK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 171 3.04 0.00 0 8 50 2 691.33099 1381.65471 4.70 37.24 3689 3689 MS2 18/22 Linfeng_20130405_rIgG7.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 211 3.04 0.00 0 33 50 2 695.84839 1390.68950 6.16 39.12 3970 3970 MS2 18/24 Linfeng_20130408_Smad2_2.raw High LENEIQTYR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 255 3.04 0.00 0 40 50 2 583.30078 1165.59429 8.13 36.14 3000 3000 MS2 15/16 Linfeng_20130408_Smad2_10.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 187 3.04 0.00 1 10 19 2 617.84564 1234.68401 4.01 36.94 3566 3566 MS2 16/18 Linfeng_20130405_rIgG1.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 142 3.03 0.00 1 5 27 2 532.81165 1064.61601 5.73 37.34 3759 3759 MS2 14/16 Linfeng_20130405_rIgG6.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 258 3.03 0.00 1 8 50 2 747.37646 1493.74565 7.57 34.42 2814 2814 MS2 14/22 Linfeng_20130405_rIgG7.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 279 3.02 0.00 0 3 27 2 497.25699 993.50670 6.72 36.19 3164 3164 MS2 13/14 Linfeng_20130408_Smad2_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 184 3.01 0.00 0 7 50 2 631.80518 1262.60307 4.64 35.97 3265 3265 MS2 20/26 Linfeng_20130408_Smad2_1.raw High SQYEQLAEQNRK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 248 3.01 0.00 1 7 50 2 747.37561 1493.74394 6.43 34.46 3017 3017 MS2 14/22 Linfeng_20130405_rIgG9.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 212 2.97 0.00 0 8 50 2 631.80658 1262.60588 6.87 36.03 3062 3062 MS2 20/26 Linfeng_20130408_Smad2_2.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 266 2.93 0.00 0 5 30 2 601.31793 1201.62859 9.48 38.64 4227 4227 MS2 17/20 Linfeng_20130408_Smad2_8.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 213 2.93 0.00 1 14 50 2 617.84369 1234.68010 0.84 36.63 3559 3559 MS2 15/18 Linfeng_20130408_Smad2_5.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 257 2.93 0.00 0 27 50 2 601.31689 1201.62651 7.75 38.06 3815 3815 MS2 12/20 Linfeng_20130408_Smad2_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 214 2.92 0.00 0 14 50 2 631.80579 1262.60430 5.61 35.79 3307 3307 MS2 20/26 Linfeng_20130408_Smad2_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 211 2.91 0.00 0 10 50 2 631.80566 1262.60405 5.42 35.65 3308 3308 MS2 21/26 Linfeng_20130408_Smad2_8.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.91 0.00 1 3 50 2 532.81317 1064.61907 8.60 37.08 3442 3442 MS2 13/16 Linfeng_20130408_Smad2_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 196 2.90 0.00 0 4 28 2 631.80719 1262.60710 7.83 35.73 3169 3169 MS2 21/26 Linfeng_20130408_Smad2_9.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 283 2.90 0.00 0 20 50 2 497.25693 993.50658 6.60 36.29 3140 3140 MS2 13/14 Linfeng_20130408_Smad2_2.raw High RVLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 126 2.90 0.00 1 27 50 2 594.35681 1187.70635 5.79 39.18 4292 4292 MS2 13/18 Linfeng_20130408_Smad2_9.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 202 2.89 0.00 0 38 50 2 631.80743 1262.60759 8.22 35.86 3061 3061 MS2 21/26 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 127 2.89 0.00 1 11 50 2 532.81213 1064.61699 6.65 37.08 3697 3697 MS2 14/16 Linfeng_20130408_Smad2_5.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 280 2.88 0.00 0 10 29 2 497.25671 993.50615 6.17 36.25 3356 3356 MS2 13/14 Linfeng_20130408_Smad2_1.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 285 2.87 0.00 0 6 9 2 497.25443 993.50157 1.56 36.14 3423 3423 MS2 13/14 Linfeng_20130408_Smad2_5.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 245 2.87 0.00 0 7 48 2 601.31708 1201.62688 8.05 38.89 3898 3898 MS2 17/20 Linfeng_20130408_Smad2_2.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 281 2.87 0.00 0 2 50 2 497.25684 993.50640 6.42 36.24 3290 3290 MS2 13/14 Linfeng_20130408_Smad2_3.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 145 2.86 0.00 1 28 50 2 532.81305 1064.61882 8.37 37.11 3642 3642 MS2 13/16 Linfeng_20130408_Smad2_4.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 173 2.84 0.00 0 9 32 2 516.30542 1031.60356 5.05 40.12 4548 4548 MS2 15/16 Linfeng_20130408_Smad2_1.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 193 2.82 0.00 0 13 48 2 516.30457 1031.60185 3.40 39.84 4626 4626 MS2 14/16 Linfeng_20130408_Smad2_8.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 265 2.81 0.00 0 11 27 2 497.25687 993.50646 6.48 36.18 3116 3116 MS2 13/14 Linfeng_20130408_Smad2_7.raw High DAEAWFNEK Unambiguous 4 1 P13645 CID 1.0000 0.0000 1 1 90 2.80 0.00 0 5 11 2 555.25067 1109.49407 3.78 40.56 4815 4815 MS2 13/16 Linfeng_20130408_Smad2_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 203 2.77 0.00 0 32 50 2 631.80719 1262.60710 7.83 35.80 3225 3225 MS2 18/26 Linfeng_20130408_Smad2_4.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 222 2.76 0.00 0 4 50 2 695.84869 1390.69011 6.60 39.04 4133 4133 MS2 20/24 Linfeng_20130408_Smad2_3.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 196 2.76 0.00 1 19 50 2 617.84833 1234.68938 8.36 36.37 3067 3067 MS2 17/18 Linfeng_20130408_Smad2_10.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 231 2.74 0.00 0 4 50 2 695.84918 1390.69109 7.30 39.03 4001 4001 MS2 19/24 Linfeng_20130408_Smad2_6.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 236 2.73 0.00 0 10 50 2 695.85010 1390.69292 8.62 38.97 4289 4289 MS2 20/24 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 139 2.72 0.00 1 31 50 2 532.81219 1064.61711 6.76 37.17 3659 3659 MS2 13/16 Linfeng_20130408_Smad2_1.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 185 2.71 0.00 1 37 50 2 617.84741 1234.68755 6.87 36.84 3317 3317 MS2 15/18 Linfeng_20130408_Smad2_2.raw High LKYENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 191 2.71 0.00 1 12 50 2 617.84680 1234.68633 5.88 36.77 3528 3528 MS2 17/18 Linfeng_20130408_Smad2_1.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 181 2.71 0.00 0 8 50 2 516.30566 1031.60405 5.53 40.06 4464 4464 MS2 14/16 Linfeng_20130408_Smad2_3.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 256 2.71 0.00 0 50 50 2 601.31653 1201.62578 7.14 38.48 3656 3656 MS2 17/20 Linfeng_20130408_Smad2_10.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 179 2.70 0.00 0 11 50 2 516.30621 1031.60515 6.59 40.00 4309 4309 MS2 14/16 Linfeng_20130408_Smad2_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 216 2.70 0.00 0 10 50 2 631.80621 1262.60515 6.29 35.83 3014 3014 MS2 19/26 Linfeng_20130408_Smad2_7.raw High RVLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 121 2.69 0.00 1 12 50 2 594.35706 1187.70683 6.20 39.49 4088 4088 MS2 15/18 Linfeng_20130408_Smad2_2.raw High YENEVALR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 287 2.67 0.00 0 43 50 2 497.25684 993.50640 6.42 35.97 3245 3245 MS2 13/14 Linfeng_20130408_Smad2_9.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 260 2.67 0.00 0 11 19 2 601.31659 1201.62590 7.24 38.88 4143 4143 MS2 17/20 Linfeng_20130408_Smad2_1.raw High KDAEAWFNEK Unambiguous 2 1 P13645 CID 1.0000 0.0000 1 1 173 2.66 0.00 1 28 50 2 619.30048 1237.59368 7.14 38.37 3731 3731 MS2 15/18 Linfeng_20130408_Smad2_2.raw High DAEAWFNEK Unambiguous 4 1 P13645 CID 1.0000 0.0000 1 1 93 2.66 0.00 0 38 34 2 555.25098 1109.49468 4.33 40.41 4706 4706 MS2 14/16 Linfeng_20130408_Smad2_9.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 202 2.65 0.00 0 5 50 2 631.80603 1262.60478 6.00 35.52 2822 2822 MS2 18/26 Linfeng_20130408_Smad2_10.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 241 2.65 0.00 0 43 50 2 601.31726 1201.62724 8.36 38.77 3919 3919 MS2 14/20 Linfeng_20130408_Smad2_6.raw High VTmQNLNDR Unambiguous 6 3 P13645;P02533;P08779 M3(Oxidation) CID 1.0000 0.0000 1 1 206 2.65 0.00 0 13 50 2 553.77148 1106.53569 8.82 32.07 2277 2277 MS2 15/16 Linfeng_20130408_Smad2_8.raw High SLLEGEGSSGGGGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 206 2.64 0.00 0 16 50 2 631.80664 1262.60600 6.96 35.92 3194 3194 MS2 18/26 Linfeng_20130408_Smad2_3.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 257 2.63 0.00 0 17 50 2 601.31659 1201.62590 7.24 38.76 3853 3853 MS2 15/20 Linfeng_20130408_Smad2_7.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 186 2.61 0.00 0 33 50 2 516.30585 1031.60442 5.88 40.12 4290 4290 MS2 14/16 Linfeng_20130408_Smad2_2.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 242 2.59 0.00 0 23 50 2 695.84766 1390.68804 5.11 39.01 3935 3935 MS2 19/24 Linfeng_20130408_Smad2_7.raw High VLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 148 2.58 0.00 0 10 50 2 516.30719 1031.60710 8.48 40.00 4537 4537 MS2 14/16 Linfeng_20130408_Smad2_4.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 140 2.58 0.00 1 22 50 2 532.81219 1064.61711 6.76 36.95 3571 3571 MS2 14/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.58 0.00 1 18 50 2 532.81287 1064.61846 8.03 37.29 3458 3458 MS2 14/16 Linfeng_20130408_Smad2_2.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 226 2.57 0.00 0 15 50 2 695.85022 1390.69316 8.80 38.98 4208 4208 MS2 18/24 Linfeng_20130408_Smad2_4.raw High DAEAWFNEK Unambiguous 4 1 P13645 CID 1.0000 0.0000 1 1 107 2.56 0.00 0 43 50 2 555.25250 1109.49773 7.08 40.56 4627 4627 MS2 13/16 Linfeng_20130408_Smad2_3.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 258 2.56 0.00 0 19 37 2 601.31635 1201.62541 6.83 38.63 4107 4107 MS2 17/20 Linfeng_20130408_Smad2_9.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 228 2.56 0.00 0 11 50 2 695.84863 1390.68999 6.51 38.86 4187 4187 MS2 22/24 Linfeng_20130408_Smad2_9.raw High RVLDELTLTK Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 126 2.55 0.00 1 18 50 2 594.35699 1187.70671 6.10 39.46 4269 4269 MS2 13/18 Linfeng_20130408_Smad2_3.raw High QSLEASLAETEGR Unambiguous 1 1 P13645 CID 1.0000 0.0000 1 1 217 2.55 0.00 0 9 50 2 695.84937 1390.69145 7.57 38.75 3741 3741 MS2 20/24 Linfeng_20130408_Smad2_10.raw P0CG05 Ig lambda-2 chain C regions OS=Homo sapiens GN=IGLC2 PE=1 SV=1 - [LAC2_HUMAN] 55.66 6 4 4 10 14.84 55.66 4 4 20.87 41.51 3 6 106 11.3 7.24 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YAASSYLSLTPEQWK Unambiguous 6 1 P0CG05 CID 1.0000 0.0000 1 1 229 4.53 0.00 0 5 1 2 872.43677 1743.86626 4.24 41.74 5717 5717 MS2 20/28 Linfeng_20130405_rIgG8.raw High YAASSYLSLTPEQWK Unambiguous 6 1 P0CG05 CID 1.0000 0.0000 1 1 238 4.47 0.00 0 10 39 2 872.43774 1743.86821 5.36 41.60 5129 5129 MS2 19/28 Linfeng_20130408_Smad2_9.raw High YAASSYLSLTPEQWK Unambiguous 6 1 P0CG05 CID 1.0000 0.0000 1 1 225 4.32 0.00 0 23 17 2 872.43848 1743.86968 6.20 41.59 5246 5246 MS2 20/28 Linfeng_20130408_Smad2_8.raw High SYScQVTHEGSTVEK Unambiguous 5 1 P0CG05 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 107 4.09 0.00 0 0 50 2 856.38855 1711.76982 6.19 33.64 2864 2864 MS2 19/28 Linfeng_20130405_rIgG8.raw High AAPSVTLFPPSSEELQANK Unambiguous 4 1 P0CG05 CID 1.0000 0.0000 1 1 203 3.50 0.00 0 4 23 2 993.51526 1986.02324 2.67 41.03 5031 5031 MS2 17/36 Linfeng_20130408_Smad2_8.raw High AAPSVTLFPPSSEELQANK Unambiguous 4 1 P0CG05 CID 1.0000 0.0000 1 1 210 3.12 0.00 0 3 50 2 993.51874 1986.03020 6.17 41.04 4922 4922 MS2 14/36 Linfeng_20130408_Smad2_9.raw High AGVETTTPSK Unambiguous 2 1 P0CG05 CID 1.0000 0.0000 1 1 311 3.12 0.00 0 11 36 2 495.76190 990.51653 6.33 31.61 2378 2378 MS2 14/18 Linfeng_20130405_rIgG8.raw High AAPSVTLFPPSSEELQANK Unambiguous 4 1 P0CG05 CID 1.0000 0.0000 1 1 225 3.10 0.00 0 5 4 2 993.51886 1986.03044 6.29 41.22 5504 5504 MS2 21/36 Linfeng_20130405_rIgG8.raw High AGVETTTPSK Unambiguous 2 1 P0CG05 CID 1.0000 0.0000 1 1 346 2.93 0.00 0 15 50 2 495.76315 990.51903 8.85 31.55 2000 2000 MS2 14/18 Linfeng_20130408_Smad2_9.raw High AGVETTTPSK Unambiguous 2 1 P0CG05 CID 1.0000 0.0000 1 1 347 2.53 0.00 0 55 50 2 495.76352 990.51976 9.59 31.70 2087 2087 MS2 14/18 Linfeng_20130408_Smad2_4.raw P62805 Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2 - [H4_HUMAN] 51.46 1 6 6 17 12.68 20.39 3 4 38.33 51.46 6 13 103 11.4 11.36 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KTVTAmDVVYALK Unambiguous 1 1 P62805 M6(Oxidation) CID 1.0000 0.0000 1 1 152 3.64 0.00 1 19 50 2 727.90503 1454.80278 7.14 39.58 4001 4001 MS2 15/24 Linfeng_20130408_Smad2_10.raw High TVTAmDVVYALK Unambiguous 1 1 P62805 M5(Oxidation) CID 1.0000 0.0000 1 1 189 3.34 0.00 0 36 50 2 663.85596 1326.70464 5.44 40.86 4418 4418 MS2 18/22 Linfeng_20130408_Smad2_10.raw High DNIQGITKPAIR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 114 3.33 0.00 1 5 50 2 663.38489 1325.76250 6.68 36.47 3099 3099 MS2 18/22 Linfeng_20130408_Smad2_10.raw High TVTAmDVVYALK Unambiguous 1 1 P62805 M5(Oxidation) CID 1.0000 0.0000 1 1 199 3.31 0.00 0 33 50 2 663.85663 1326.70598 6.45 41.00 4905 4905 MS2 16/22 Linfeng_20130408_Smad2_9.raw High TVTAMDVVYALK Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 190 3.24 0.00 0 24 17 2 655.85791 1310.70854 4.60 42.13 5224 5224 MS2 19/22 Linfeng_20130405_rIgG10.raw High VFLENVIR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 166 3.22 0.00 0 2 1 2 495.29416 989.58104 3.18 41.45 4951 4951 MS2 13/14 Linfeng_20130405_rIgG10.raw High TVTAmDVVYALK Unambiguous 1 1 P62805 M5(Oxidation) CID 1.0000 0.0000 1 1 188 3.18 0.00 0 17 20 2 663.85504 1326.70281 4.06 41.22 4864 4864 MS2 19/22 Linfeng_20130405_rIgG10.raw High VFLENVIR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 135 3.06 0.00 0 2 9 2 495.29681 989.58635 8.55 41.07 4488 4488 MS2 12/14 Linfeng_20130408_Smad2_10.raw High KTVTAMDVVYALK Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 172 3.04 0.00 1 26 22 2 719.90546 1438.80364 4.28 41.56 4997 4997 MS2 16/24 Linfeng_20130405_rIgG10.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 225 3.02 0.00 0 23 50 2 590.81812 1180.62895 6.85 39.13 4277 4277 MS2 17/18 Linfeng_20130408_Smad2_9.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 228 2.83 0.00 0 37 50 2 590.81830 1180.62932 7.16 38.95 3809 3809 MS2 16/18 Linfeng_20130408_Smad2_10.raw High DNIQGITKPAIR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 119 2.74 0.00 1 14 50 2 663.38507 1325.76286 6.96 36.64 3468 3468 MS2 16/22 Linfeng_20130408_Smad2_9.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 227 2.71 0.00 0 47 50 2 590.81805 1180.62883 6.74 39.39 4343 4343 MS2 15/18 Linfeng_20130408_Smad2_4.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 205 2.61 0.00 0 50 50 2 590.81677 1180.62627 4.57 39.47 4341 4341 MS2 16/18 Linfeng_20130408_Smad2_1.raw High DAVTYTEHAK Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 210 2.59 0.00 0 29 50 2 567.77924 1134.55120 7.57 32.92 2183 2183 MS2 12/18 Linfeng_20130408_Smad2_10.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 194 2.57 0.00 0 70 50 2 590.81866 1180.63005 7.78 39.42 4126 4126 MS2 14/18 Linfeng_20130408_Smad2_6.raw High ISGLIYEETR Unambiguous 1 1 P62805 CID 1.0000 0.0000 1 1 203 2.57 0.00 0 47 50 2 590.81683 1180.62639 4.67 39.37 4047 4047 MS2 15/18 Linfeng_20130408_Smad2_7.raw P02533 "Keratin, type I cytoskeletal 14 OS=Homo sapiens GN=KRT14 PE=1 SV=4 - [K1C14_HUMAN]" 46.19 3 8 18 154 244.38 37.92 14 63 323.56 36.44 15 91 472 51.5 5.16 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 192 5.75 0.00 0 13 50 3 770.36224 2309.07218 3.49 37.75 3738 3738 MS2 36/84 Linfeng_20130408_Smad2_3.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 200 5.69 0.00 0 0 50 2 1043.50391 2086.00054 6.45 40.50 4697 4697 MS2 27/40 Linfeng_20130405_rIgG1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 196 5.66 0.00 0 0 43 2 1043.50391 2086.00054 6.45 40.52 4841 4841 MS2 28/40 Linfeng_20130405_rIgG2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 151 5.60 0.00 0 4 40 2 1051.49866 2101.99004 3.82 39.16 4359 4359 MS2 29/40 Linfeng_20130405_rIgG3.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 207 5.51 0.00 0 0 50 2 1043.50366 2086.00005 6.21 40.50 4675 4675 MS2 22/40 Linfeng_20130408_Smad2_1.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 151 5.44 0.00 0 0 50 2 1051.50195 2101.99663 6.96 39.12 4221 4221 MS2 28/40 Linfeng_20130408_Smad2_1.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 157 5.33 0.00 0 2 50 2 1051.50281 2101.99834 7.77 39.08 4144 4144 MS2 24/40 Linfeng_20130408_Smad2_3.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 148 5.32 0.00 0 7 50 2 1051.50098 2101.99468 6.03 39.13 4269 4269 MS2 25/40 Linfeng_20130405_rIgG7.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 196 5.29 0.00 0 7 36 2 1043.50305 2085.99883 5.63 40.48 4808 4808 MS2 28/40 Linfeng_20130405_rIgG3.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 161 5.29 0.00 0 0 50 2 1051.50439 2102.00151 9.28 39.00 4301 4301 MS2 27/40 Linfeng_20130408_Smad2_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 179 5.27 0.00 0 21 13 3 770.36053 2309.06705 1.27 37.80 3959 3959 MS2 37/84 Linfeng_20130405_rIgG2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 185 5.24 0.00 0 10 13 3 770.36188 2309.07108 3.02 37.85 4156 4156 MS2 37/84 Linfeng_20130405_rIgG4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 160 5.19 0.00 0 0 46 2 1051.49939 2101.99150 4.52 39.18 4593 4593 MS2 26/40 Linfeng_20130405_rIgG4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 194 5.19 0.00 0 22 50 3 770.36304 2309.07456 4.52 37.64 3863 3863 MS2 38/84 Linfeng_20130408_Smad2_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 181 5.18 0.00 0 20 50 3 770.36066 2309.06742 1.43 37.82 3585 3585 MS2 37/84 Linfeng_20130408_Smad2_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 184 5.17 0.00 0 13 15 3 770.36194 2309.07126 3.10 37.82 3924 3924 MS2 38/84 Linfeng_20130405_rIgG3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 191 5.10 0.00 0 19 35 3 770.36224 2309.07218 3.49 37.71 3605 3605 MS2 38/84 Linfeng_20130408_Smad2_6.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 156 5.09 0.00 0 0 50 2 1051.50159 2101.99590 6.61 39.03 3941 3941 MS2 25/40 Linfeng_20130408_Smad2_7.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 164 5.01 0.00 0 0 50 2 1051.50317 2101.99907 8.12 39.04 4002 4002 MS2 24/40 Linfeng_20130408_Smad2_6.raw High ILTATVDNANVLLQIDNAR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 114 4.98 0.00 0 14 4 3 685.38354 2054.13608 5.81 41.98 5413 5413 MS2 35/72 Linfeng_20130405_rIgG2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 154 4.96 0.00 0 2 26 2 1051.49927 2101.99126 4.40 39.16 4241 4241 MS2 27/40 Linfeng_20130405_rIgG1.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 142 4.90 0.00 0 0 50 2 1051.50098 2101.99468 6.03 38.89 4196 4196 MS2 25/40 Linfeng_20130408_Smad2_9.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 155 4.86 0.00 0 1 50 2 1051.50281 2101.99834 7.77 39.16 3981 3981 MS2 24/40 Linfeng_20130408_Smad2_2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 159 4.81 0.00 0 5 48 2 1051.49927 2101.99126 4.40 39.12 4379 4379 MS2 25/40 Linfeng_20130405_rIgG2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P02533 M11(Oxidation) CID 1.0000 0.0000 1 1 152 4.70 0.00 0 0 50 2 1051.49890 2101.99053 4.05 39.15 4353 4353 MS2 22/40 Linfeng_20130405_rIgG6.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 185 4.69 0.00 0 30 50 3 770.36108 2309.06870 1.99 37.69 3540 3540 MS2 37/84 Linfeng_20130408_Smad2_7.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 187 4.59 0.00 0 10 10 3 770.36115 2309.06888 2.07 37.88 3835 3835 MS2 32/84 Linfeng_20130405_rIgG1.raw High ILTATVDNANVLLQIDNAR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 112 4.43 0.00 0 16 5 3 685.38336 2054.13553 5.55 42.02 5284 5284 MS2 30/72 Linfeng_20130405_rIgG1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 190 4.23 0.00 0 47 50 2 1043.50415 2086.00102 6.68 40.40 4438 4438 MS2 21/40 Linfeng_20130408_Smad2_6.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 293 4.17 0.00 0 2 50 2 681.35449 1361.70171 8.04 35.06 2833 2833 MS2 20/24 Linfeng_20130408_Smad2_6.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 288 4.16 0.00 0 3 47 2 681.35358 1361.69988 6.69 34.90 2902 2902 MS2 20/24 Linfeng_20130408_Smad2_9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 296 4.09 0.00 0 8 50 2 681.35419 1361.70110 7.59 34.89 3080 3080 MS2 19/24 Linfeng_20130408_Smad2_8.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 268 4.05 0.00 0 5 50 2 681.35138 1361.69548 3.47 35.25 3277 3277 MS2 20/24 Linfeng_20130405_rIgG9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 314 4.03 0.00 0 10 50 2 681.35394 1361.70061 7.23 35.04 3084 3084 MS2 20/24 Linfeng_20130408_Smad2_5.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 227 3.98 0.00 1 16 13 2 690.37061 1379.73393 4.45 38.32 4067 4067 MS2 16/20 Linfeng_20130405_rIgG3.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 314 3.93 0.00 0 8 48 2 681.35223 1361.69719 4.72 35.19 3365 3365 MS2 20/24 Linfeng_20130405_rIgG8.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 277 3.88 0.00 0 2 50 2 681.35327 1361.69927 6.25 35.23 3120 3120 MS2 20/24 Linfeng_20130405_rIgG3.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 280 3.87 0.00 0 14 50 2 681.35376 1361.70024 6.96 35.19 3040 3040 MS2 20/24 Linfeng_20130408_Smad2_1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 292 3.86 0.00 0 11 50 2 681.35345 1361.69963 6.51 35.23 2849 2849 MS2 17/24 Linfeng_20130408_Smad2_2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 226 3.85 0.00 0 0 21 2 651.33453 1301.66179 2.60 37.81 4141 4141 MS2 19/22 Linfeng_20130405_rIgG4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 270 3.83 0.00 0 16 50 2 681.35333 1361.69939 6.34 35.20 3182 3182 MS2 17/24 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 246 3.83 0.00 0 4 14 2 515.30298 1029.59868 4.60 40.73 5134 5134 MS2 15/16 Linfeng_20130405_rIgG4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 294 3.83 0.00 0 12 50 2 681.35400 1361.70073 7.32 35.02 2993 2993 MS2 18/24 Linfeng_20130408_Smad2_4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 225 3.83 0.00 1 16 50 2 690.37073 1379.73418 4.62 38.02 3904 3904 MS2 17/20 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.82 0.00 0 22 50 2 651.33386 1301.66045 1.56 37.40 3846 3846 MS2 18/22 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.82 0.00 0 0 21 2 651.33350 1301.65972 1.00 37.74 3797 3797 MS2 18/22 Linfeng_20130408_Smad2_1.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.81 0.00 0 3 50 2 651.33392 1301.66057 1.66 37.77 3573 3573 MS2 18/22 Linfeng_20130408_Smad2_2.raw High TMQNLEIELQSQLSmK Unambiguous 1 1 P02533 M15(Oxidation) CID 1.0000 0.0000 1 1 262 3.81 0.00 0 14 7 3 636.98816 1908.94992 4.88 41.89 5374 5374 MS2 31/60 Linfeng_20130405_rIgG2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 219 3.79 0.00 0 2 9 2 651.33447 1301.66167 2.50 37.81 3848 3848 MS2 18/22 Linfeng_20130405_rIgG7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 239 3.79 0.00 0 4 37 2 515.30493 1029.60259 8.40 40.53 4805 4805 MS2 15/16 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.79 0.00 0 16 13 2 515.30298 1029.59868 4.60 40.67 4893 4893 MS2 15/16 Linfeng_20130405_rIgG2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.78 0.00 0 13 5 2 651.33362 1301.65996 1.19 37.85 3823 3823 MS2 18/22 Linfeng_20130405_rIgG1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 292 3.78 0.00 0 13 50 2 681.35211 1361.69695 4.54 35.27 2983 2983 MS2 17/24 Linfeng_20130405_rIgG10.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 222 3.76 0.00 1 14 50 2 690.37231 1379.73735 6.92 38.17 3907 3907 MS2 16/20 Linfeng_20130408_Smad2_1.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 15 14 2 561.79596 1122.58464 5.03 36.83 3546 3546 MS2 15/16 Linfeng_20130408_Smad2_1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.75 0.00 0 13 15 2 515.30280 1029.59831 4.25 40.67 4877 4877 MS2 15/16 Linfeng_20130405_rIgG6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 247 3.72 0.00 0 6 13 2 651.33429 1301.66130 2.22 37.77 4096 4096 MS2 18/22 Linfeng_20130405_rIgG9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.72 0.00 0 11 22 2 515.30261 1029.59795 3.89 40.73 5147 5147 MS2 15/16 Linfeng_20130405_rIgG9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 32 32 2 681.35132 1361.69536 3.38 35.24 3405 3405 MS2 17/24 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 4 7 2 515.30365 1029.60002 5.91 40.33 4680 4680 MS2 15/16 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.69 0.00 0 13 4 2 651.33368 1301.66008 1.28 37.81 3921 3921 MS2 18/22 Linfeng_20130405_rIgG3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.67 0.00 0 10 50 2 651.33484 1301.66240 3.07 37.61 3579 3579 MS2 18/22 Linfeng_20130408_Smad2_6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.66 0.00 0 0 50 2 651.33380 1301.66033 1.47 37.44 3717 3717 MS2 17/22 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 248 3.65 0.00 0 0 50 2 651.33429 1301.66130 2.22 37.68 3720 3720 MS2 18/22 Linfeng_20130408_Smad2_3.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 287 3.63 0.00 0 26 50 2 681.35284 1361.69841 5.62 35.24 3059 3059 MS2 19/24 Linfeng_20130405_rIgG1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 272 3.61 0.00 0 15 50 2 681.35370 1361.70012 6.87 35.13 2976 2976 MS2 17/24 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.61 0.00 1 51 50 2 690.37317 1379.73906 8.16 38.00 3898 3898 MS2 16/20 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.61 0.00 0 27 50 2 651.33606 1301.66484 4.94 37.58 3843 3843 MS2 18/22 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.61 0.00 0 0 8 2 515.30255 1029.59783 3.77 40.68 4785 4785 MS2 15/16 Linfeng_20130405_rIgG7.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 200 3.60 0.00 0 3 29 2 713.35577 1425.70427 5.17 36.74 3595 3595 MS2 20/28 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.60 0.00 0 7 13 2 515.30273 1029.59819 4.13 40.74 4683 4683 MS2 15/16 Linfeng_20130405_rIgG10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.60 0.00 0 18 50 2 561.79767 1122.58806 8.07 36.69 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 333 3.59 0.00 0 27 50 2 681.35254 1361.69780 5.17 35.15 3300 3300 MS2 18/24 Linfeng_20130405_rIgG4.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.58 0.00 0 24 9 2 651.33417 1301.66106 2.03 37.79 4197 4197 MS2 18/22 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.58 0.00 0 2 18 2 515.30341 1029.59953 5.43 40.55 4483 4483 MS2 15/16 Linfeng_20130408_Smad2_6.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 286 3.58 0.00 0 14 50 2 681.35352 1361.69975 6.60 35.23 3114 3114 MS2 17/24 Linfeng_20130405_rIgG6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 245 3.58 0.00 0 7 8 2 515.30249 1029.59770 3.65 40.67 4875 4875 MS2 15/16 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 237 3.56 0.00 0 2 30 2 515.30493 1029.60259 8.40 40.55 4622 4622 MS2 15/16 Linfeng_20130408_Smad2_3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.56 0.00 0 0 50 2 651.33545 1301.66362 4.00 37.60 3777 3777 MS2 18/22 Linfeng_20130408_Smad2_4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 218 3.54 0.00 1 12 30 2 690.37054 1379.73381 4.36 38.41 3986 3986 MS2 16/20 Linfeng_20130405_rIgG1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 270 3.54 0.00 0 12 50 2 681.35321 1361.69914 6.16 35.21 3061 3061 MS2 19/24 Linfeng_20130405_rIgG7.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.50 0.00 1 23 50 2 690.37317 1379.73906 8.16 38.06 3991 3991 MS2 16/20 Linfeng_20130408_Smad2_5.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.50 0.00 0 14 11 2 651.33508 1301.66289 3.44 37.83 3904 3904 MS2 18/22 Linfeng_20130405_rIgG6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 261 3.46 0.00 0 4 15 2 515.30316 1029.59905 4.96 40.50 4401 4401 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 282 3.43 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.44 3089 3089 MS2 15/16 Linfeng_20130408_Smad2_10.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 210 3.42 0.00 1 25 50 2 690.37317 1379.73906 8.16 38.19 3738 3738 MS2 17/20 Linfeng_20130408_Smad2_6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.41 0.00 0 11 50 2 561.79736 1122.58745 7.53 36.77 3457 3457 MS2 15/16 Linfeng_20130408_Smad2_3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 242 3.39 0.00 0 8 13 2 651.33398 1301.66069 1.75 37.69 4191 4191 MS2 17/22 Linfeng_20130405_rIgG8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.39 0.00 0 7 50 2 651.33417 1301.66106 2.03 37.59 3518 3518 MS2 18/22 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.38 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.71 3284 3284 MS2 15/16 Linfeng_20130408_Smad2_7.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 219 3.38 0.00 1 18 50 3 422.89651 1266.67499 4.82 36.79 3519 3519 MS2 21/36 Linfeng_20130408_Smad2_9.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 196 3.35 0.00 1 18 50 3 422.89737 1266.67755 6.85 37.01 3608 3608 MS2 21/36 Linfeng_20130408_Smad2_1.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 208 3.35 0.00 0 1 30 2 713.35480 1425.70232 3.80 36.71 3517 3517 MS2 20/28 Linfeng_20130405_rIgG7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 298 3.34 0.00 0 18 50 2 561.79712 1122.58696 7.09 36.71 3326 3326 MS2 15/16 Linfeng_20130408_Smad2_6.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 270 3.33 0.00 0 13 50 2 553.78754 1106.56780 4.94 36.34 3386 3386 MS2 17/20 Linfeng_20130408_Smad2_1.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 220 3.30 0.00 0 34 50 2 713.35718 1425.70708 7.14 36.38 3547 3547 MS2 19/28 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.30 0.00 0 15 18 2 651.33344 1301.65959 0.91 37.77 3949 3949 MS2 17/22 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 244 3.30 0.00 0 14 9 2 515.30273 1029.59819 4.13 40.66 5282 5282 MS2 15/16 Linfeng_20130405_rIgG8.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 215 3.29 0.00 0 3 50 2 713.35522 1425.70317 4.40 36.78 3424 3424 MS2 21/28 Linfeng_20130405_rIgG10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 276 3.29 0.00 0 22 50 2 561.79730 1122.58733 7.42 36.52 3428 3428 MS2 15/16 Linfeng_20130408_Smad2_9.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 216 3.26 0.00 0 7 50 2 713.35779 1425.70830 7.99 36.62 3410 3410 MS2 22/28 Linfeng_20130408_Smad2_3.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 204 3.25 0.00 0 6 50 2 713.35767 1425.70806 7.82 36.38 3383 3383 MS2 21/28 Linfeng_20130408_Smad2_9.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 195 3.25 0.00 1 12 50 3 422.89740 1266.67765 6.92 36.90 3637 3637 MS2 19/36 Linfeng_20130408_Smad2_5.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.24 0.00 0 11 50 2 561.79724 1122.58721 7.31 36.87 3324 3324 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 6 50 2 561.79370 1122.58013 1.00 36.67 3568 3568 MS2 15/16 Linfeng_20130408_Smad2_5.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 198 3.20 0.00 1 15 10 3 422.89642 1266.67472 4.61 37.22 3657 3657 MS2 19/36 Linfeng_20130405_rIgG1.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 207 3.18 0.00 0 12 50 2 713.35767 1425.70806 7.82 36.71 3274 3274 MS2 19/28 Linfeng_20130408_Smad2_2.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 141 3.17 0.00 1 22 36 2 532.81140 1064.61553 5.27 37.27 3822 3822 MS2 13/16 Linfeng_20130405_rIgG2.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 202 3.17 0.00 0 2 24 2 713.35358 1425.69988 2.09 36.75 3577 3577 MS2 21/28 Linfeng_20130405_rIgG6.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 209 3.17 0.00 0 21 50 2 713.35516 1425.70305 4.31 36.77 3763 3763 MS2 19/28 Linfeng_20130405_rIgG9.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 195 3.16 0.00 1 16 50 3 422.89746 1266.67783 7.06 36.92 3391 3391 MS2 20/36 Linfeng_20130408_Smad2_6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 300 3.16 0.00 0 13 36 2 561.79688 1122.58647 6.66 36.48 3579 3579 MS2 15/16 Linfeng_20130408_Smad2_8.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 221 3.16 0.00 1 15 50 2 690.37244 1379.73760 7.10 38.24 3872 3872 MS2 16/20 Linfeng_20130408_Smad2_3.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 214 3.15 0.00 0 13 50 2 713.35785 1425.70842 8.08 36.53 3458 3458 MS2 21/28 Linfeng_20130408_Smad2_4.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.14 0.00 0 23 36 2 561.79547 1122.58367 4.16 36.89 3551 3551 MS2 15/16 Linfeng_20130405_rIgG1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 238 3.13 0.00 0 1 50 2 515.30469 1029.60210 7.92 40.69 4469 4469 MS2 15/16 Linfeng_20130408_Smad2_2.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 265 3.13 0.00 0 17 50 2 681.35345 1361.69963 6.51 35.01 2810 2810 MS2 18/24 Linfeng_20130408_Smad2_7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 236 3.13 0.00 0 61 21 2 515.30255 1029.59783 3.77 40.67 5265 5265 MS2 15/16 Linfeng_20130405_rIgG5.raw High ASLENSLEETK Unambiguous 2 2 P02533;P08779 CID 1.0000 0.0000 1 1 252 3.12 0.00 0 14 8 2 610.80542 1220.60356 2.48 37.51 3846 3846 MS2 17/20 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 229 3.11 0.00 0 8 37 2 515.30304 1029.59880 4.72 40.70 4768 4768 MS2 15/16 Linfeng_20130405_rIgG1.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 3.10 0.00 0 31 50 2 553.78851 1106.56975 6.71 36.07 3280 3280 MS2 16/20 Linfeng_20130408_Smad2_9.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.10 0.00 1 20 50 2 690.37097 1379.73467 4.98 38.36 3725 3725 MS2 13/20 Linfeng_20130408_Smad2_2.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 224 3.10 0.00 0 0 50 2 713.35492 1425.70256 3.97 36.74 3806 3806 MS2 22/28 Linfeng_20130405_rIgG4.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 225 3.09 0.00 0 21 37 2 651.33374 1301.66020 1.38 37.83 3721 3721 MS2 17/22 Linfeng_20130405_rIgG10.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 203 3.08 0.00 0 2 49 2 713.35608 1425.70488 5.60 36.71 3640 3640 MS2 22/28 Linfeng_20130405_rIgG2.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 3.08 0.00 0 30 50 2 553.78717 1106.56706 4.28 36.40 3484 3484 MS2 17/20 Linfeng_20130405_rIgG3.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 207 3.06 0.00 0 40 50 2 713.35815 1425.70903 8.51 36.69 3498 3498 MS2 21/28 Linfeng_20130408_Smad2_1.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 224 3.05 0.00 0 10 42 2 713.35541 1425.70354 4.66 36.75 3506 3506 MS2 22/28 Linfeng_20130405_rIgG1.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 233 3.04 0.00 0 18 50 2 713.35803 1425.70879 8.34 36.52 3226 3226 MS2 20/28 Linfeng_20130408_Smad2_7.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.04 0.00 0 28 50 2 553.78754 1106.56780 4.94 36.25 3182 3182 MS2 17/20 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 142 3.03 0.00 1 5 27 2 532.81165 1064.61601 5.73 37.34 3759 3759 MS2 14/16 Linfeng_20130405_rIgG6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 260 3.01 0.00 0 34 50 2 561.79437 1122.58147 2.20 36.86 3568 3568 MS2 15/16 Linfeng_20130405_rIgG7.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 206 2.94 0.00 0 42 50 2 713.35785 1425.70842 8.08 36.25 3032 3032 MS2 18/28 Linfeng_20130408_Smad2_10.raw High DAEEWFFTK Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 91 2.93 0.00 0 46 18 2 586.76917 1172.53105 4.38 42.01 5277 5277 MS2 13/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.91 0.00 1 3 50 2 532.81317 1064.61907 8.60 37.08 3442 3442 MS2 13/16 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 127 2.89 0.00 1 11 50 2 532.81213 1064.61699 6.65 37.08 3697 3697 MS2 14/16 Linfeng_20130408_Smad2_5.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 187 2.86 0.00 0 16 50 2 713.35382 1425.70036 2.43 36.52 3531 3531 MS2 19/28 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 145 2.86 0.00 1 28 50 2 532.81305 1064.61882 8.37 37.11 3642 3642 MS2 13/16 Linfeng_20130408_Smad2_4.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 208 2.83 0.00 0 25 50 2 713.35809 1425.70891 8.42 36.53 3271 3271 MS2 19/28 Linfeng_20130408_Smad2_6.raw High VVSTHEQVLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 159 2.79 0.00 0 22 50 2 584.33228 1167.65727 7.86 33.79 2550 2550 MS2 16/18 Linfeng_20130408_Smad2_9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 291 2.76 0.00 0 18 50 2 681.35364 1361.70000 6.78 34.74 2624 2624 MS2 13/24 Linfeng_20130408_Smad2_10.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 243 2.76 0.00 0 39 50 2 553.78870 1106.57012 7.04 36.41 3181 3181 MS2 15/20 Linfeng_20130408_Smad2_2.raw High DAEEWFFTK Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 92 2.73 0.00 0 44 30 2 586.76917 1172.53105 4.38 42.17 4979 4979 MS2 13/16 Linfeng_20130408_Smad2_2.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 139 2.72 0.00 1 31 50 2 532.81219 1064.61711 6.76 37.17 3659 3659 MS2 13/16 Linfeng_20130408_Smad2_1.raw High DAEEWFFTK Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 90 2.66 0.00 0 36 13 2 586.76874 1172.53020 3.65 42.15 5188 5188 MS2 13/16 Linfeng_20130408_Smad2_3.raw High VTmQNLNDR Unambiguous 6 3 P13645;P02533;P08779 M3(Oxidation) CID 1.0000 0.0000 1 1 206 2.65 0.00 0 13 50 2 553.77148 1106.53569 8.82 32.07 2277 2277 MS2 15/16 Linfeng_20130408_Smad2_8.raw High APSTYGGGLSVSSSR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 223 2.62 0.00 0 47 50 2 713.35809 1425.70891 8.42 36.77 3460 3460 MS2 16/28 Linfeng_20130408_Smad2_3.raw High DAEEWFFTK Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 93 2.62 0.00 0 32 9 2 586.76849 1172.52971 3.23 42.17 5292 5292 MS2 14/16 Linfeng_20130408_Smad2_1.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 140 2.58 0.00 1 22 50 2 532.81219 1064.61711 6.76 36.95 3571 3571 MS2 14/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.58 0.00 1 18 50 2 532.81287 1064.61846 8.03 37.29 3458 3458 MS2 14/16 Linfeng_20130408_Smad2_2.raw High mSVEADINGLR Unambiguous 3 2 P02533;P08727 M1(Oxidation) CID 1.0000 0.0000 1 1 257 2.58 0.00 0 21 50 2 610.80475 1220.60222 6.71 38.85 4132 4132 MS2 15/20 Linfeng_20130408_Smad2_1.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 185 2.57 0.00 1 3 50 2 633.84222 1266.67717 6.54 37.03 3613 3613 MS2 15/18 Linfeng_20130408_Smad2_1.raw High DAEEWFFTK Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 97 2.55 0.00 0 25 19 2 586.76868 1172.53008 3.54 42.11 4959 4959 MS2 13/16 Linfeng_20130408_Smad2_7.raw High TKYETELNLR Unambiguous 1 1 P02533 CID 1.0000 0.0000 1 1 193 2.54 0.00 1 12 50 2 633.84314 1266.67900 7.99 36.95 3357 3357 MS2 14/18 Linfeng_20130408_Smad2_7.raw F5H265 Ubiquitin (Fragment) OS=Homo sapiens GN=UBC PE=4 SV=1 - [F5H265_HUMAN] 45.64 18 3 3 6 0.00 20.40 45.64 3 6 149 16.8 6.58 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TITLEVEPSDTIENVK Unambiguous 18 1 F5H265 CID 1.0000 0.0000 1 1 207 4.49 0.00 0 8 50 2 894.47437 1787.94145 7.87 40.66 4790 4790 MS2 23/30 Linfeng_20130408_Smad2_9.raw High TITLEVEPSDTIENVK Unambiguous 18 1 F5H265 CID 1.0000 0.0000 1 1 196 3.99 0.00 0 8 50 2 894.47308 1787.93889 6.44 40.83 4808 4808 MS2 16/30 Linfeng_20130408_Smad2_4.raw High TITLEVEPSDTIENVK Unambiguous 18 1 F5H265 CID 1.0000 0.0000 1 1 225 3.68 0.00 0 10 32 2 894.47101 1787.93474 4.12 40.74 4930 4930 MS2 16/30 Linfeng_20130408_Smad2_8.raw High TLSDYNIQK Unambiguous 17 1 F5H265 CID 1.0000 0.0000 1 1 195 2.84 0.00 0 20 50 2 541.28326 1081.55925 6.30 36.30 3518 3518 MS2 11/16 Linfeng_20130408_Smad2_8.raw High ESTLHLVLR Unambiguous 17 1 F5H265 CID 1.0000 0.0000 1 1 126 2.82 0.00 0 38 50 2 534.31787 1067.62847 7.17 39.03 4245 4245 MS2 12/16 Linfeng_20130408_Smad2_9.raw High ESTLHLVLR Unambiguous 17 1 F5H265 CID 1.0000 0.0000 1 1 128 2.59 0.00 0 38 50 2 534.31714 1067.62700 5.80 38.94 3804 3804 MS2 10/16 Linfeng_20130408_Smad2_10.raw P06702 Protein S100-A9 OS=Homo sapiens GN=S100A9 PE=1 SV=1 - [S10A9_HUMAN] 44.74 1 4 4 9 28.19 44.74 4 9 114 13.2 6.13 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NIETIINTFHQYSVK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 241 3.87 0.00 0 5 22 2 903.97723 1806.94719 4.80 41.94 5253 5253 MS2 20/28 Linfeng_20130408_Smad2_9.raw High NIETIINTFHQYSVK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 240 3.64 0.00 0 9 50 2 903.97803 1806.94878 5.68 42.07 4943 4943 MS2 19/28 Linfeng_20130408_Smad2_2.raw High LGHPDTLNQGEFK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 241 3.56 0.00 0 8 23 3 485.91528 1455.73130 5.88 36.27 3344 3344 MS2 27/48 Linfeng_20130408_Smad2_9.raw High VIEHImEDLDTNADK Unambiguous 1 1 P06702 M6(Oxidation) CID 1.0000 0.0000 1 1 173 3.27 0.00 0 38 50 3 586.94873 1758.83164 5.74 36.97 3580 3580 MS2 22/56 Linfeng_20130408_Smad2_9.raw High LGHPDTLNQGEFK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 237 3.06 0.00 0 12 50 2 728.37097 1455.73467 8.20 36.54 3387 3387 MS2 16/24 Linfeng_20130408_Smad2_3.raw High LGHPDTLNQGEFK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 223 2.98 0.00 0 3 50 2 728.37012 1455.73296 7.02 36.27 3346 3346 MS2 14/24 Linfeng_20130408_Smad2_9.raw High LGHPDTLNQGEFK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 232 2.72 0.00 0 3 50 2 728.37048 1455.73369 7.53 36.62 3248 3248 MS2 14/24 Linfeng_20130408_Smad2_2.raw High LGHPDTLNQGEFK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 213 2.55 0.00 0 10 50 2 728.37054 1455.73381 7.61 36.16 3005 3005 MS2 14/24 Linfeng_20130408_Smad2_10.raw High KDLQNFLK Unambiguous 1 1 P06702 CID 1.0000 0.0000 1 1 198 2.54 0.00 1 57 50 2 503.29297 1005.57866 5.83 38.19 3960 3960 MS2 12/14 Linfeng_20130408_Smad2_9.raw P08779 "Keratin, type I cytoskeletal 16 OS=Homo sapiens GN=KRT16 PE=1 SV=4 - [K1C16_HUMAN]" 39.53 2 8 16 126 164.94 33.40 13 45 284.70 37.21 15 81 473 51.2 5.05 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 87 5.84 0.00 0 9 18 3 688.72363 2064.15635 5.55 41.60 4774 4774 MS2 38/72 Linfeng_20130408_Smad2_7.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 92 5.72 0.00 0 5 28 3 688.72302 2064.15451 4.67 41.49 5087 5087 MS2 40/72 Linfeng_20130408_Smad2_9.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 89 5.40 0.00 0 2 39 2 1032.58081 2064.15434 4.58 41.53 5102 5102 MS2 23/36 Linfeng_20130408_Smad2_9.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 97 5.32 0.00 0 14 30 3 688.72321 2064.15506 4.93 41.59 4842 4842 MS2 40/72 Linfeng_20130408_Smad2_6.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 129 5.18 0.00 0 0 36 2 1052.48938 2103.97148 4.86 38.64 4180 4180 MS2 24/40 Linfeng_20130405_rIgG3.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 153 5.12 0.00 0 0 50 2 1052.49329 2103.97930 8.57 38.34 4012 4012 MS2 24/40 Linfeng_20130408_Smad2_9.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 199 5.07 0.00 0 3 30 3 784.03979 2350.10483 6.03 36.58 3542 3542 MS2 34/84 Linfeng_20130405_rIgG3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 162 4.99 0.00 0 0 50 2 1044.49292 2087.97856 5.85 39.92 4285 4285 MS2 23/40 Linfeng_20130408_Smad2_6.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 198 4.98 0.00 0 5 50 3 784.04150 2350.10996 8.22 36.43 3239 3239 MS2 36/84 Linfeng_20130408_Smad2_6.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 155 4.90 0.00 0 0 50 2 1052.49268 2103.97807 7.99 38.61 4054 4054 MS2 22/40 Linfeng_20130408_Smad2_1.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 145 4.80 0.00 0 31 33 2 1044.49182 2087.97637 4.80 40.07 4669 4669 MS2 21/40 Linfeng_20130405_rIgG3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 143 4.77 0.00 0 0 50 2 1044.49280 2087.97832 5.73 40.11 4593 4593 MS2 19/40 Linfeng_20130405_rIgG7.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 104 4.74 0.00 0 11 16 3 688.72162 2064.15030 2.63 41.66 5096 5096 MS2 39/72 Linfeng_20130408_Smad2_1.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 191 4.50 0.00 0 16 50 3 784.03925 2350.10318 5.33 36.59 3602 3602 MS2 31/84 Linfeng_20130405_rIgG2.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 88 4.50 0.00 0 13 4 3 688.72351 2064.15598 5.38 41.72 5287 5287 MS2 31/72 Linfeng_20130405_rIgG3.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 192 4.40 0.00 0 2 50 3 784.04071 2350.10758 7.20 36.54 3452 3452 MS2 32/84 Linfeng_20130408_Smad2_1.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 136 4.17 0.00 0 0 50 2 1052.48962 2103.97197 5.09 38.65 4109 4109 MS2 21/40 Linfeng_20130405_rIgG7.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 144 4.16 0.00 0 0 50 2 1052.49219 2103.97710 7.52 38.49 3767 3767 MS2 23/40 Linfeng_20130408_Smad2_7.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 191 4.10 0.00 0 2 50 3 784.03937 2350.10355 5.49 36.60 3460 3460 MS2 34/84 Linfeng_20130405_rIgG1.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 227 3.98 0.00 1 16 13 2 690.37061 1379.73393 4.45 38.32 4067 4067 MS2 16/20 Linfeng_20130405_rIgG3.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 195 3.95 0.00 0 11 50 3 784.04041 2350.10666 6.81 36.25 3339 3339 MS2 28/84 Linfeng_20130408_Smad2_9.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 243 3.93 0.00 0 4 50 2 703.35419 1405.70110 6.60 35.20 3056 3056 MS2 21/24 Linfeng_20130405_rIgG7.raw High IIAATIENAQPILQIDNAR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 91 3.90 0.00 0 12 31 3 688.72400 2064.15744 6.09 41.67 5009 5009 MS2 32/72 Linfeng_20130408_Smad2_3.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 241 3.89 0.00 0 3 50 2 703.35437 1405.70146 6.86 35.13 3021 3021 MS2 20/24 Linfeng_20130408_Smad2_1.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 226 3.85 0.00 0 0 21 2 651.33453 1301.66179 2.60 37.81 4141 4141 MS2 19/22 Linfeng_20130405_rIgG4.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 246 3.83 0.00 0 4 14 2 515.30298 1029.59868 4.60 40.73 5134 5134 MS2 15/16 Linfeng_20130405_rIgG4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 225 3.83 0.00 1 16 50 2 690.37073 1379.73418 4.62 38.02 3904 3904 MS2 17/20 Linfeng_20130408_Smad2_9.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 275 3.82 0.00 1 11 46 3 707.35645 2120.05478 3.83 37.34 3798 3798 MS2 30/72 Linfeng_20130405_rIgG3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.82 0.00 0 22 50 2 651.33386 1301.66045 1.56 37.40 3846 3846 MS2 18/22 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.82 0.00 0 0 21 2 651.33350 1301.65972 1.00 37.74 3797 3797 MS2 18/22 Linfeng_20130408_Smad2_1.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.81 0.00 0 3 50 2 651.33392 1301.66057 1.66 37.77 3573 3573 MS2 18/22 Linfeng_20130408_Smad2_2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 219 3.79 0.00 0 2 9 2 651.33447 1301.66167 2.50 37.81 3848 3848 MS2 18/22 Linfeng_20130405_rIgG7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 239 3.79 0.00 0 4 37 2 515.30493 1029.60259 8.40 40.53 4805 4805 MS2 15/16 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.79 0.00 0 16 13 2 515.30298 1029.59868 4.60 40.67 4893 4893 MS2 15/16 Linfeng_20130405_rIgG2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.78 0.00 0 13 5 2 651.33362 1301.65996 1.19 37.85 3823 3823 MS2 18/22 Linfeng_20130405_rIgG1.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 P08779 M11(Oxidation) CID 1.0000 0.0000 1 1 137 3.77 0.00 0 0 50 2 1052.49280 2103.97832 8.11 38.59 3988 3988 MS2 18/40 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 222 3.76 0.00 1 14 50 2 690.37231 1379.73735 6.92 38.17 3907 3907 MS2 16/20 Linfeng_20130408_Smad2_1.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 15 14 2 561.79596 1122.58464 5.03 36.83 3546 3546 MS2 15/16 Linfeng_20130408_Smad2_1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.75 0.00 0 13 15 2 515.30280 1029.59831 4.25 40.67 4877 4877 MS2 15/16 Linfeng_20130405_rIgG6.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 232 3.73 0.00 0 2 50 2 703.35535 1405.70342 8.25 35.00 2815 2815 MS2 21/24 Linfeng_20130408_Smad2_6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 247 3.72 0.00 0 6 13 2 651.33429 1301.66130 2.22 37.77 4096 4096 MS2 18/22 Linfeng_20130405_rIgG9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.72 0.00 0 11 22 2 515.30261 1029.59795 3.89 40.73 5147 5147 MS2 15/16 Linfeng_20130405_rIgG9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 4 7 2 515.30365 1029.60002 5.91 40.33 4680 4680 MS2 15/16 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.69 0.00 0 13 4 2 651.33368 1301.66008 1.28 37.81 3921 3921 MS2 18/22 Linfeng_20130405_rIgG3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.67 0.00 0 10 50 2 651.33484 1301.66240 3.07 37.61 3579 3579 MS2 18/22 Linfeng_20130408_Smad2_6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.66 0.00 0 0 50 2 651.33380 1301.66033 1.47 37.44 3717 3717 MS2 17/22 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 248 3.65 0.00 0 0 50 2 651.33429 1301.66130 2.22 37.68 3720 3720 MS2 18/22 Linfeng_20130408_Smad2_3.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 245 3.64 0.00 0 7 50 2 703.35406 1405.70085 6.43 35.22 2847 2847 MS2 19/24 Linfeng_20130408_Smad2_2.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 256 3.62 0.00 0 5 50 2 703.35455 1405.70183 7.12 34.83 2879 2879 MS2 19/24 Linfeng_20130408_Smad2_9.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.61 0.00 1 51 50 2 690.37317 1379.73906 8.16 38.00 3898 3898 MS2 16/20 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.61 0.00 0 27 50 2 651.33606 1301.66484 4.94 37.58 3843 3843 MS2 18/22 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.61 0.00 0 0 8 2 515.30255 1029.59783 3.77 40.68 4785 4785 MS2 15/16 Linfeng_20130405_rIgG7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.60 0.00 0 7 13 2 515.30273 1029.59819 4.13 40.74 4683 4683 MS2 15/16 Linfeng_20130405_rIgG10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.60 0.00 0 18 50 2 561.79767 1122.58806 8.07 36.69 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_4.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.58 0.00 0 24 9 2 651.33417 1301.66106 2.03 37.79 4197 4197 MS2 18/22 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.58 0.00 0 2 18 2 515.30341 1029.59953 5.43 40.55 4483 4483 MS2 15/16 Linfeng_20130408_Smad2_6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 245 3.58 0.00 0 7 8 2 515.30249 1029.59770 3.65 40.67 4875 4875 MS2 15/16 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 237 3.56 0.00 0 2 30 2 515.30493 1029.60259 8.40 40.55 4622 4622 MS2 15/16 Linfeng_20130408_Smad2_3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.56 0.00 0 0 50 2 651.33545 1301.66362 4.00 37.60 3777 3777 MS2 18/22 Linfeng_20130408_Smad2_4.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 235 3.55 0.00 0 11 50 2 703.35504 1405.70281 7.81 34.99 2982 2982 MS2 18/24 Linfeng_20130408_Smad2_4.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 239 3.55 0.00 0 2 50 2 703.35406 1405.70085 6.43 35.18 3177 3177 MS2 18/24 Linfeng_20130405_rIgG2.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 218 3.54 0.00 1 12 30 2 690.37054 1379.73381 4.36 38.41 3986 3986 MS2 16/20 Linfeng_20130405_rIgG1.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 244 3.54 0.00 0 1 50 2 703.35455 1405.70183 7.12 35.08 2961 2961 MS2 21/24 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.50 0.00 1 23 50 2 690.37317 1379.73906 8.16 38.06 3991 3991 MS2 16/20 Linfeng_20130408_Smad2_5.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.50 0.00 0 14 11 2 651.33508 1301.66289 3.44 37.83 3904 3904 MS2 18/22 Linfeng_20130405_rIgG6.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 245 3.49 0.00 0 5 50 2 703.35400 1405.70073 6.34 35.15 3095 3095 MS2 21/24 Linfeng_20130405_rIgG3.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 166 3.49 0.00 0 0 50 2 1044.49329 2087.97930 6.20 40.11 4703 4703 MS2 18/40 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 261 3.46 0.00 0 4 15 2 515.30316 1029.59905 4.96 40.50 4401 4401 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 282 3.43 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.44 3089 3089 MS2 15/16 Linfeng_20130408_Smad2_10.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 210 3.42 0.00 1 25 50 2 690.37317 1379.73906 8.16 38.19 3738 3738 MS2 17/20 Linfeng_20130408_Smad2_6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.41 0.00 0 11 50 2 561.79736 1122.58745 7.53 36.77 3457 3457 MS2 15/16 Linfeng_20130408_Smad2_3.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 271 3.41 0.00 1 13 50 3 707.35571 2120.05259 2.79 37.11 3628 3628 MS2 25/72 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 242 3.39 0.00 0 8 13 2 651.33398 1301.66069 1.75 37.69 4191 4191 MS2 17/22 Linfeng_20130405_rIgG8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.39 0.00 0 7 50 2 651.33417 1301.66106 2.03 37.59 3518 3518 MS2 18/22 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.38 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.71 3284 3284 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 298 3.34 0.00 0 18 50 2 561.79712 1122.58696 7.09 36.71 3326 3326 MS2 15/16 Linfeng_20130408_Smad2_6.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 270 3.33 0.00 0 13 50 2 553.78754 1106.56780 4.94 36.34 3386 3386 MS2 17/20 Linfeng_20130408_Smad2_1.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.30 0.00 0 15 18 2 651.33344 1301.65959 0.91 37.77 3949 3949 MS2 17/22 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 244 3.30 0.00 0 14 9 2 515.30273 1029.59819 4.13 40.66 5282 5282 MS2 15/16 Linfeng_20130405_rIgG8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 276 3.29 0.00 0 22 50 2 561.79730 1122.58733 7.42 36.52 3428 3428 MS2 15/16 Linfeng_20130408_Smad2_9.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.24 0.00 0 11 50 2 561.79724 1122.58721 7.31 36.87 3324 3324 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 6 50 2 561.79370 1122.58013 1.00 36.67 3568 3568 MS2 15/16 Linfeng_20130408_Smad2_5.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 192 3.23 0.00 0 3 43 2 669.83972 1338.67217 5.45 36.83 3626 3626 MS2 22/26 Linfeng_20130405_rIgG3.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 141 3.17 0.00 1 22 36 2 532.81140 1064.61553 5.27 37.27 3822 3822 MS2 13/16 Linfeng_20130405_rIgG2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 300 3.16 0.00 0 13 36 2 561.79688 1122.58647 6.66 36.48 3579 3579 MS2 15/16 Linfeng_20130408_Smad2_8.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 221 3.16 0.00 1 15 50 2 690.37244 1379.73760 7.10 38.24 3872 3872 MS2 16/20 Linfeng_20130408_Smad2_3.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.14 0.00 0 23 36 2 561.79547 1122.58367 4.16 36.89 3551 3551 MS2 15/16 Linfeng_20130405_rIgG1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 238 3.13 0.00 0 1 50 2 515.30469 1029.60210 7.92 40.69 4469 4469 MS2 15/16 Linfeng_20130408_Smad2_2.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 192 3.13 0.00 0 5 35 2 669.83954 1338.67180 5.18 36.86 3689 3689 MS2 21/26 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 236 3.13 0.00 0 61 21 2 515.30255 1029.59783 3.77 40.67 5265 5265 MS2 15/16 Linfeng_20130405_rIgG5.raw High ASLENSLEETK Unambiguous 2 2 P02533;P08779 CID 1.0000 0.0000 1 1 252 3.12 0.00 0 14 8 2 610.80542 1220.60356 2.48 37.51 3846 3846 MS2 17/20 Linfeng_20130405_rIgG3.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 250 3.11 0.00 0 11 50 2 703.35449 1405.70171 7.03 34.83 3060 3060 MS2 20/24 Linfeng_20130408_Smad2_8.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 229 3.11 0.00 0 8 37 2 515.30304 1029.59880 4.72 40.70 4768 4768 MS2 15/16 Linfeng_20130405_rIgG1.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 3.10 0.00 0 31 50 2 553.78851 1106.56975 6.71 36.07 3280 3280 MS2 16/20 Linfeng_20130408_Smad2_9.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.10 0.00 1 20 50 2 690.37097 1379.73467 4.98 38.36 3725 3725 MS2 13/20 Linfeng_20130408_Smad2_2.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 171 3.10 0.00 0 5 50 2 669.83966 1338.67204 5.36 36.46 3571 3571 MS2 20/26 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 225 3.09 0.00 0 21 37 2 651.33374 1301.66020 1.38 37.83 3721 3721 MS2 17/22 Linfeng_20130405_rIgG10.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 3.08 0.00 0 30 50 2 553.78717 1106.56706 4.28 36.40 3484 3484 MS2 17/20 Linfeng_20130405_rIgG3.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 237 3.04 0.00 0 6 50 2 703.35327 1405.69927 5.30 35.10 3286 3286 MS2 19/24 Linfeng_20130405_rIgG4.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 187 3.04 0.00 0 4 50 2 669.84015 1338.67302 6.09 36.78 3529 3529 MS2 23/26 Linfeng_20130408_Smad2_1.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 242 3.04 0.00 0 15 50 2 703.35577 1405.70427 8.86 34.79 2637 2637 MS2 17/24 Linfeng_20130408_Smad2_10.raw High DAETWFLSK Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 185 3.04 0.00 0 8 10 2 548.77136 1096.53545 4.06 41.77 5187 5187 MS2 13/16 Linfeng_20130408_Smad2_9.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.04 0.00 0 28 50 2 553.78754 1106.56780 4.94 36.25 3182 3182 MS2 17/20 Linfeng_20130408_Smad2_6.raw High EVASNSELVQSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 228 3.03 0.00 0 3 50 2 703.35535 1405.70342 8.25 34.98 2799 2799 MS2 18/24 Linfeng_20130408_Smad2_7.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 142 3.03 0.00 1 5 27 2 532.81165 1064.61601 5.73 37.34 3759 3759 MS2 14/16 Linfeng_20130405_rIgG6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 260 3.01 0.00 0 34 50 2 561.79437 1122.58147 2.20 36.86 3568 3568 MS2 15/16 Linfeng_20130405_rIgG7.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 218 3.01 0.00 0 19 50 2 669.83917 1338.67107 4.63 36.79 3545 3545 MS2 22/26 Linfeng_20130405_rIgG7.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.91 0.00 1 3 50 2 532.81317 1064.61907 8.60 37.08 3442 3442 MS2 13/16 Linfeng_20130408_Smad2_6.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 193 2.89 0.00 0 22 50 2 669.84143 1338.67558 8.00 36.61 3296 3296 MS2 19/26 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 127 2.89 0.00 1 11 50 2 532.81213 1064.61699 6.65 37.08 3697 3697 MS2 14/16 Linfeng_20130408_Smad2_5.raw High DAETWFLSK Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 193 2.86 0.00 0 34 38 2 548.77142 1096.53557 4.17 41.84 4932 4932 MS2 14/16 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 145 2.86 0.00 1 28 50 2 532.81305 1064.61882 8.37 37.11 3642 3642 MS2 13/16 Linfeng_20130408_Smad2_4.raw High QTVEADVNGLR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 245 2.83 0.00 0 68 38 2 601.31207 1201.61687 -0.28 37.45 3735 3735 MS2 16/20 Linfeng_20130408_Smad2_1.raw High DAETWFLSK Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 195 2.80 0.00 0 22 17 2 548.77124 1096.53520 3.83 41.90 5189 5189 MS2 14/16 Linfeng_20130408_Smad2_1.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 190 2.80 0.00 0 9 50 2 669.84113 1338.67497 7.55 36.64 3259 3259 MS2 20/26 Linfeng_20130408_Smad2_7.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 193 2.78 0.00 0 4 50 2 669.84149 1338.67571 8.09 36.73 3444 3444 MS2 22/26 Linfeng_20130408_Smad2_3.raw High ISSVLAGGScR Unambiguous 2 2 P02533;P08779 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 243 2.76 0.00 0 39 50 2 553.78870 1106.57012 7.04 36.41 3181 3181 MS2 15/20 Linfeng_20130408_Smad2_2.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 139 2.72 0.00 1 31 50 2 532.81219 1064.61711 6.76 37.17 3659 3659 MS2 13/16 Linfeng_20130408_Smad2_1.raw High QTVEADVNGLR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 257 2.66 0.00 0 0 50 2 601.31262 1201.61797 0.64 37.40 3655 3655 MS2 15/20 Linfeng_20130408_Smad2_3.raw High VTmQNLNDR Unambiguous 6 3 P13645;P02533;P08779 M3(Oxidation) CID 1.0000 0.0000 1 1 206 2.65 0.00 0 13 50 2 553.77148 1106.53569 8.82 32.07 2277 2277 MS2 15/16 Linfeng_20130408_Smad2_8.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 198 2.61 0.00 0 26 50 2 669.84192 1338.67656 8.73 36.48 3415 3415 MS2 17/26 Linfeng_20130408_Smad2_9.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 188 2.61 0.00 0 24 50 2 669.84186 1338.67644 8.64 36.67 3503 3503 MS2 19/26 Linfeng_20130408_Smad2_4.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 140 2.58 0.00 1 22 50 2 532.81219 1064.61711 6.76 36.95 3571 3571 MS2 14/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.58 0.00 1 18 50 2 532.81287 1064.61846 8.03 37.29 3458 3458 MS2 14/16 Linfeng_20130408_Smad2_2.raw High QTVEADVNGLR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 224 2.54 0.00 0 20 50 2 601.31506 1201.62285 4.70 36.46 3427 3427 MS2 14/20 Linfeng_20130408_Smad2_1.raw High APSTYGGGLSVSSR Unambiguous 1 1 P08779 CID 1.0000 0.0000 1 1 173 2.53 0.00 0 26 50 2 669.84186 1338.67644 8.64 36.37 3069 3069 MS2 18/26 Linfeng_20130408_Smad2_10.raw P02538 "Keratin, type II cytoskeletal 6A OS=Homo sapiens GN=KRT6A PE=1 SV=3 - [K2C6A_HUMAN]" 38.65 6 3 18 113 123.12 20.04 8 30 283.60 38.65 18 83 564 60.0 8.00 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 232 5.27 0.00 0 0 22 2 724.39331 1447.77934 2.88 37.69 3919 3919 MS2 27/32 Linfeng_20130408_Smad2_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 217 5.19 0.00 0 0 31 2 724.39105 1447.77483 -0.24 38.00 3852 3852 MS2 24/32 Linfeng_20130408_Smad2_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 219 5.01 0.00 0 13 50 2 724.39404 1447.78081 3.89 38.18 3802 3802 MS2 25/32 Linfeng_20130405_rIgG10.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 232 5.00 0.00 0 2 42 2 724.39264 1447.77800 1.95 37.99 3794 3794 MS2 25/32 Linfeng_20130408_Smad2_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 227 4.98 0.00 0 0 50 2 724.39429 1447.78130 4.22 38.11 4230 4230 MS2 26/32 Linfeng_20130405_rIgG4.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 230 4.93 0.00 0 20 50 2 724.39319 1447.77910 2.71 37.89 3860 3860 MS2 23/32 Linfeng_20130408_Smad2_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 214 4.92 0.00 0 0 45 2 724.39355 1447.77983 3.21 38.18 3908 3908 MS2 25/32 Linfeng_20130405_rIgG1.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 229 4.89 0.00 0 14 22 2 724.39294 1447.77861 2.37 37.68 3795 3795 MS2 24/32 Linfeng_20130408_Smad2_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 235 4.88 0.00 0 7 50 2 724.39240 1447.77751 1.61 38.07 3638 3638 MS2 24/32 Linfeng_20130408_Smad2_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 221 4.82 0.00 0 0 31 2 724.39478 1447.78227 4.90 38.08 4304 4304 MS2 27/32 Linfeng_20130405_rIgG8.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 236 4.76 0.00 0 0 25 2 724.39233 1447.77739 1.53 38.06 3982 3982 MS2 26/32 Linfeng_20130405_rIgG3.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 234 4.74 0.00 0 16 50 2 724.39270 1447.77812 2.03 37.88 3930 3930 MS2 23/32 Linfeng_20130408_Smad2_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 221 4.70 0.00 0 0 36 2 724.39313 1447.77898 2.62 38.10 4030 4030 MS2 26/32 Linfeng_20130405_rIgG2.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 233 4.68 0.00 0 0 41 2 724.39258 1447.77788 1.86 37.89 3648 3648 MS2 26/32 Linfeng_20130408_Smad2_6.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 213 4.60 0.00 0 0 50 2 724.39355 1447.77983 3.21 37.91 3589 3589 MS2 25/32 Linfeng_20130408_Smad2_7.raw High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 268 4.47 0.00 1 6 10 3 453.25082 1357.73792 4.18 39.48 4470 4470 MS2 26/44 Linfeng_20130405_rIgG3.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 237 4.42 0.00 0 0 24 2 724.39349 1447.77971 3.13 38.07 3913 3913 MS2 23/32 Linfeng_20130405_rIgG7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 252 4.36 0.00 0 21 3 2 665.36847 1329.72966 2.69 42.53 5104 5104 MS2 20/22 Linfeng_20130408_Smad2_2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.32 0.00 0 10 1 2 665.36890 1329.73052 3.33 42.40 5568 5568 MS2 20/22 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 236 4.32 0.00 0 9 1 2 665.36951 1329.73174 4.25 42.45 5533 5533 MS2 20/22 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 213 4.31 0.00 0 18 3 2 665.37012 1329.73296 5.16 42.54 6058 6058 MS2 20/22 Linfeng_20130405_rIgG8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.31 0.00 0 12 1 2 665.36761 1329.72795 1.40 42.49 5312 5312 MS2 20/22 Linfeng_20130408_Smad2_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 227 4.31 0.00 0 0 50 2 724.39398 1447.78069 3.80 37.59 3372 3372 MS2 24/32 Linfeng_20130408_Smad2_10.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 4.29 0.00 0 16 3 2 665.36896 1329.73064 3.42 42.40 5418 5418 MS2 20/22 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.27 0.00 0 25 1 2 665.36945 1329.73161 4.15 42.58 5882 5882 MS2 19/22 Linfeng_20130405_rIgG4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 212 4.25 0.00 0 25 3 2 665.37030 1329.73332 5.44 42.56 5867 5867 MS2 19/22 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.23 0.00 0 17 0 2 665.36865 1329.73003 2.96 42.56 5653 5653 MS2 20/22 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 15 1 2 665.36871 1329.73015 3.05 42.45 5159 5159 MS2 19/22 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 18 4 2 665.36884 1329.73039 3.24 42.34 4964 4964 MS2 19/22 Linfeng_20130408_Smad2_10.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.19 0.00 0 27 4 2 665.36908 1329.73088 3.60 42.42 5072 5072 MS2 19/22 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 12 2 2 665.37012 1329.73296 5.16 42.53 6004 6004 MS2 20/22 Linfeng_20130405_rIgG5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 14 2 2 665.37012 1329.73296 5.16 42.59 5628 5628 MS2 19/22 Linfeng_20130405_rIgG6.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 4.16 0.00 0 10 30 2 799.88702 1598.76677 4.73 38.70 4089 4089 MS2 19/32 Linfeng_20130405_rIgG1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 232 4.13 0.00 0 33 1 2 665.36914 1329.73100 3.69 42.52 5619 5619 MS2 19/22 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 240 4.12 0.00 0 37 4 2 665.36969 1329.73210 4.52 42.42 5377 5377 MS2 19/22 Linfeng_20130408_Smad2_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 224 4.10 0.00 0 34 50 2 724.39435 1447.78142 4.31 38.14 4210 4210 MS2 21/32 Linfeng_20130405_rIgG9.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 4.04 0.00 0 13 50 2 799.88696 1598.76665 4.66 38.60 4167 4167 MS2 20/32 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 237 4.03 0.00 0 26 1 2 665.36890 1329.73052 3.33 42.56 5529 5529 MS2 19/22 Linfeng_20130405_rIgG7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 244 3.99 0.00 0 34 1 2 665.36993 1329.73259 4.89 42.57 5509 5509 MS2 19/22 Linfeng_20130405_rIgG1.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.98 0.00 0 4 8 3 630.99792 1890.97922 4.40 42.72 5701 5701 MS2 28/56 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.95 0.00 0 40 3 2 665.36841 1329.72954 2.59 42.48 5417 5417 MS2 19/22 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 170 3.89 0.00 0 5 18 2 632.35431 1263.70134 5.51 41.35 4591 4591 MS2 18/20 Linfeng_20130408_Smad2_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 4 1 P02538 CID 1.0000 0.0000 1 1 213 3.87 0.00 0 11 50 2 724.39685 1447.78642 7.77 38.16 3664 3664 MS2 22/32 Linfeng_20130408_Smad2_2.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 6 2 P02538;P04259 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 160 3.83 0.00 0 0 50 3 1024.14734 3070.42746 5.91 40.39 4637 4637 MS2 31/104 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 3.77 0.00 0 20 5 2 665.36890 1329.73052 3.33 42.60 5408 5408 MS2 19/22 Linfeng_20130405_rIgG10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 197 3.76 0.00 0 19 20 2 632.35242 1263.69756 2.51 41.55 4965 4965 MS2 18/20 Linfeng_20130408_Smad2_3.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 202 3.75 0.00 0 15 50 2 799.88672 1598.76616 4.35 38.69 4427 4427 MS2 17/32 Linfeng_20130405_rIgG4.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 204 3.71 0.00 0 6 4 2 632.35388 1263.70049 4.83 41.63 5251 5251 MS2 18/20 Linfeng_20130405_rIgG3.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 193 3.69 0.00 0 11 50 2 799.88812 1598.76897 6.11 38.52 3846 3846 MS2 17/32 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.69 0.00 0 11 12 2 632.35291 1263.69853 3.29 41.51 4811 4811 MS2 18/20 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.65 0.00 0 18 34 2 632.35278 1263.69829 3.09 41.59 4776 4776 MS2 18/20 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 211 3.59 0.00 0 17 38 2 632.35272 1263.69817 3.00 41.49 5035 5035 MS2 18/20 Linfeng_20130408_Smad2_4.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 3.59 0.00 0 16 50 2 799.88776 1598.76824 5.65 38.60 4050 4050 MS2 17/32 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 220 3.54 0.00 0 15 36 2 632.35333 1263.69939 3.96 41.53 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_7.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 3 2 2 632.35370 1263.70012 4.54 41.63 5266 5266 MS2 18/20 Linfeng_20130405_rIgG2.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 239 3.51 0.00 0 2 7 2 704.36304 1407.71880 5.18 42.02 5415 5415 MS2 18/22 Linfeng_20130408_Smad2_8.raw High YEELQVTAGR Unambiguous 5 1 P02538 CID 1.0000 0.0000 1 1 258 3.47 0.00 0 11 7 2 583.29694 1165.58660 1.52 37.27 3692 3692 MS2 17/18 Linfeng_20130408_Smad2_1.raw High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 243 3.46 0.00 1 12 38 2 679.37189 1357.73650 3.13 39.45 4461 4461 MS2 19/22 Linfeng_20130405_rIgG3.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 256 3.43 0.00 0 2 29 2 945.99530 1890.98332 6.57 42.74 5578 5578 MS2 18/28 Linfeng_20130405_rIgG1.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 252 3.40 0.00 0 0 50 2 945.99530 1890.98332 6.57 42.70 5166 5166 MS2 19/28 Linfeng_20130408_Smad2_2.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.40 0.00 0 3 12 3 630.99792 1890.97922 4.40 42.58 5639 5639 MS2 23/56 Linfeng_20130408_Smad2_8.raw High GSGGLGGAcGGAGFGSR Unambiguous 5 2 P02538;P04259 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 3.39 0.00 0 23 16 2 712.82373 1424.64018 4.60 36.90 3650 3650 MS2 20/32 Linfeng_20130405_rIgG3.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 244 3.38 0.00 0 6 17 2 704.36243 1407.71758 4.32 41.97 5265 5265 MS2 18/22 Linfeng_20130408_Smad2_9.raw High RGFSANSAR Unambiguous 4 2 P02538;P04259 CID 1.0000 0.0000 1 1 254 3.32 0.00 1 17 50 2 483.25269 965.49809 7.14 31.69 2090 2090 MS2 13/16 Linfeng_20130408_Smad2_1.raw High SGFSSVSVSR Unambiguous 1 1 P02538 CID 1.0000 0.0000 1 1 157 3.30 0.00 0 5 20 2 506.76004 1012.51280 6.88 36.38 3381 3381 MS2 16/18 Linfeng_20130408_Smad2_9.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 257 3.29 0.00 0 7 24 2 704.36243 1407.71758 4.32 42.06 4941 4941 MS2 18/22 Linfeng_20130408_Smad2_7.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 245 3.27 0.00 0 6 19 2 704.36121 1407.71514 2.58 42.12 5274 5274 MS2 18/22 Linfeng_20130408_Smad2_1.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 3.26 0.00 1 21 50 3 378.52829 1133.57032 7.34 33.89 2644 2644 MS2 20/32 Linfeng_20130408_Smad2_1.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 239 3.22 0.00 0 4 21 2 704.36261 1407.71794 4.58 42.06 5017 5017 MS2 18/22 Linfeng_20130408_Smad2_6.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 245 3.17 0.00 0 7 10 2 704.36243 1407.71758 4.32 42.20 5361 5361 MS2 18/22 Linfeng_20130405_rIgG1.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 252 3.17 0.00 0 5 25 2 704.36481 1407.72234 7.70 42.10 5170 5170 MS2 18/22 Linfeng_20130408_Smad2_3.raw High YEELQVTAGR Unambiguous 5 1 P02538 CID 1.0000 0.0000 1 1 258 3.14 0.00 0 8 50 2 583.30048 1165.59368 7.60 37.23 3602 3602 MS2 17/18 Linfeng_20130408_Smad2_3.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 255 3.13 0.00 0 0 50 2 704.36285 1407.71843 4.92 42.14 4967 4967 MS2 17/22 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.09 0.00 0 25 50 2 554.27972 1107.55217 8.32 35.15 2860 2860 MS2 15/16 Linfeng_20130408_Smad2_6.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 132 3.07 0.00 0 47 50 2 606.78357 1212.55986 5.51 37.25 3686 3686 MS2 15/18 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.05 0.00 0 11 50 2 554.27979 1107.55229 8.44 35.11 3020 3020 MS2 15/16 Linfeng_20130408_Smad2_4.raw High YEELQVTAGR Unambiguous 5 1 P02538 CID 1.0000 0.0000 1 1 261 3.05 0.00 0 3 37 2 583.30060 1165.59392 7.81 37.17 3468 3468 MS2 17/18 Linfeng_20130408_Smad2_6.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 3.04 0.00 0 10 16 2 602.32550 1203.64372 5.70 40.36 4424 4424 MS2 16/18 Linfeng_20130408_Smad2_6.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 216 3.01 0.00 0 9 6 2 704.36322 1407.71916 5.44 42.16 5468 5468 MS2 18/22 Linfeng_20130405_rIgG3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 211 3.00 0.00 0 27 50 2 554.27936 1107.55144 7.66 35.31 2870 2870 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 184 2.99 0.00 0 16 20 2 632.35297 1263.69866 3.38 41.61 5077 5077 MS2 17/20 Linfeng_20130408_Smad2_1.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 348 2.98 0.00 0 9 11 2 602.32538 1203.64348 5.50 40.44 4587 4587 MS2 17/18 Linfeng_20130408_Smad2_3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 198 2.97 0.00 0 11 26 2 554.27838 1107.54949 5.90 34.98 3107 3107 MS2 14/16 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.96 0.00 0 10 12 2 602.32544 1203.64360 5.60 40.48 4665 4665 MS2 17/18 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 202 2.94 0.00 0 7 50 2 554.27856 1107.54985 6.23 35.01 2939 2939 MS2 15/16 Linfeng_20130408_Smad2_9.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 125 2.90 0.00 0 17 50 2 606.78448 1212.56169 7.02 37.04 3602 3602 MS2 16/18 Linfeng_20130408_Smad2_9.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 351 2.89 0.00 0 5 8 2 602.32544 1203.64360 5.60 40.18 4628 4628 MS2 17/18 Linfeng_20130408_Smad2_9.raw High YEELQVTAGR Unambiguous 5 1 P02538 CID 1.0000 0.0000 1 1 257 2.89 0.00 0 29 47 2 583.29932 1165.59136 5.61 37.16 3723 3723 MS2 17/18 Linfeng_20130408_Smad2_5.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 111 2.88 0.00 0 28 50 2 606.78278 1212.55828 4.20 36.92 3718 3718 MS2 15/18 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 353 2.86 0.00 0 15 50 2 602.32599 1203.64470 6.51 40.35 4354 4354 MS2 16/18 Linfeng_20130408_Smad2_7.raw High YEELQVTAGR Unambiguous 5 1 P02538 CID 1.0000 0.0000 1 1 286 2.86 0.00 0 15 50 2 583.29980 1165.59233 6.44 37.36 3478 3478 MS2 16/18 Linfeng_20130408_Smad2_2.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 2.85 0.00 0 16 50 2 799.88849 1598.76970 6.56 38.65 3823 3823 MS2 14/32 Linfeng_20130408_Smad2_2.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 123 2.85 0.00 0 14 50 2 606.78461 1212.56194 7.22 37.21 3676 3676 MS2 15/18 Linfeng_20130408_Smad2_4.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 258 2.85 0.00 0 17 28 2 611.82208 1222.63689 4.45 39.10 4380 4380 MS2 16/20 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.83 0.00 0 11 12 2 602.32568 1203.64409 6.01 40.19 4740 4740 MS2 17/18 Linfeng_20130408_Smad2_8.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 2.79 0.00 0 27 50 2 554.27930 1107.55132 7.55 35.14 2840 2840 MS2 15/16 Linfeng_20130408_Smad2_7.raw High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 243 2.76 0.00 1 42 50 2 679.37354 1357.73979 5.56 39.12 4390 4390 MS2 11/22 Linfeng_20130408_Smad2_8.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 232 2.68 0.00 0 34 50 2 611.82220 1222.63713 4.65 39.30 4313 4313 MS2 13/20 Linfeng_20130408_Smad2_4.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 347 2.68 0.00 0 10 28 2 602.32599 1203.64470 6.51 40.53 4415 4415 MS2 17/18 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 235 2.68 0.00 0 23 50 2 554.27667 1107.54607 2.81 35.10 3104 3104 MS2 14/16 Linfeng_20130408_Smad2_5.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 2.66 0.00 0 32 15 2 602.32538 1203.64348 5.50 40.37 4752 4752 MS2 16/18 Linfeng_20130408_Smad2_5.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 244 2.65 0.00 0 22 50 2 611.82361 1222.63994 6.94 39.25 4010 4010 MS2 13/20 Linfeng_20130408_Smad2_7.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 222 2.64 0.00 0 69 50 2 554.28033 1107.55339 9.43 35.24 3052 3052 MS2 14/16 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 199 2.64 0.00 0 18 50 2 554.27930 1107.55132 7.55 34.85 2654 2654 MS2 15/16 Linfeng_20130408_Smad2_10.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 257 2.64 0.00 0 0 39 2 945.99219 1890.97710 3.28 42.70 5503 5503 MS2 14/28 Linfeng_20130408_Smad2_1.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 258 2.63 0.00 0 13 50 2 611.82166 1222.63603 3.75 39.34 4230 4230 MS2 16/20 Linfeng_20130408_Smad2_3.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 227 2.63 0.00 0 11 50 2 611.82434 1222.64141 8.14 39.09 4263 4263 MS2 15/20 Linfeng_20130408_Smad2_9.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 237 2.62 0.00 0 69 50 2 611.82281 1222.63835 5.65 39.26 4076 4076 MS2 13/20 Linfeng_20130408_Smad2_6.raw High GSGGLGGAcGGAGFGSR Unambiguous 5 2 P02538;P04259 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 110 2.61 0.00 0 34 50 2 712.82538 1424.64348 6.91 36.62 3462 3462 MS2 13/32 Linfeng_20130408_Smad2_9.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 2.60 0.00 1 46 50 2 567.29004 1133.57280 9.53 33.82 2484 2484 MS2 14/16 Linfeng_20130408_Smad2_6.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.58 0.00 0 0 50 2 799.88824 1598.76921 6.26 38.54 3972 3972 MS2 15/32 Linfeng_20130408_Smad2_3.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw P04259 "Keratin, type II cytoskeletal 6B OS=Homo sapiens GN=KRT6B PE=1 SV=5 - [K2C6B_HUMAN]" 38.65 5 2 18 126 128.11 23.58 10 34 303.22 38.65 18 92 564 60.0 8.00 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 268 4.47 0.00 1 6 10 3 453.25082 1357.73792 4.18 39.48 4470 4470 MS2 26/44 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 252 4.36 0.00 0 21 3 2 665.36847 1329.72966 2.69 42.53 5104 5104 MS2 20/22 Linfeng_20130408_Smad2_2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.32 0.00 0 10 1 2 665.36890 1329.73052 3.33 42.40 5568 5568 MS2 20/22 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 236 4.32 0.00 0 9 1 2 665.36951 1329.73174 4.25 42.45 5533 5533 MS2 20/22 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 213 4.31 0.00 0 18 3 2 665.37012 1329.73296 5.16 42.54 6058 6058 MS2 20/22 Linfeng_20130405_rIgG8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.31 0.00 0 12 1 2 665.36761 1329.72795 1.40 42.49 5312 5312 MS2 20/22 Linfeng_20130408_Smad2_3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 4.29 0.00 0 16 3 2 665.36896 1329.73064 3.42 42.40 5418 5418 MS2 20/22 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.27 0.00 0 25 1 2 665.36945 1329.73161 4.15 42.58 5882 5882 MS2 19/22 Linfeng_20130405_rIgG4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 212 4.25 0.00 0 25 3 2 665.37030 1329.73332 5.44 42.56 5867 5867 MS2 19/22 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.23 0.00 0 17 0 2 665.36865 1329.73003 2.96 42.56 5653 5653 MS2 20/22 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 15 1 2 665.36871 1329.73015 3.05 42.45 5159 5159 MS2 19/22 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 18 4 2 665.36884 1329.73039 3.24 42.34 4964 4964 MS2 19/22 Linfeng_20130408_Smad2_10.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 243 4.22 0.00 0 6 50 2 718.37836 1435.74944 7.41 35.87 3381 3381 MS2 27/32 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.19 0.00 0 27 4 2 665.36908 1329.73088 3.60 42.42 5072 5072 MS2 19/22 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 12 2 2 665.37012 1329.73296 5.16 42.53 6004 6004 MS2 20/22 Linfeng_20130405_rIgG5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 14 2 2 665.37012 1329.73296 5.16 42.59 5628 5628 MS2 19/22 Linfeng_20130405_rIgG6.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 4.16 0.00 0 10 30 2 799.88702 1598.76677 4.73 38.70 4089 4089 MS2 19/32 Linfeng_20130405_rIgG1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 232 4.13 0.00 0 33 1 2 665.36914 1329.73100 3.69 42.52 5619 5619 MS2 19/22 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 240 4.12 0.00 0 37 4 2 665.36969 1329.73210 4.52 42.42 5377 5377 MS2 19/22 Linfeng_20130408_Smad2_4.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 242 4.04 0.00 0 8 50 2 718.37848 1435.74968 7.58 35.92 3229 3229 MS2 25/32 Linfeng_20130408_Smad2_9.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 4.04 0.00 0 13 50 2 799.88696 1598.76665 4.66 38.60 4167 4167 MS2 20/32 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 237 4.03 0.00 0 26 1 2 665.36890 1329.73052 3.33 42.56 5529 5529 MS2 19/22 Linfeng_20130405_rIgG7.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 244 4.01 0.00 0 3 50 2 718.37885 1435.75041 8.10 36.18 3272 3272 MS2 22/32 Linfeng_20130408_Smad2_3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 244 3.99 0.00 0 34 1 2 665.36993 1329.73259 4.89 42.57 5509 5509 MS2 19/22 Linfeng_20130405_rIgG1.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.98 0.00 0 4 8 3 630.99792 1890.97922 4.40 42.72 5701 5701 MS2 28/56 Linfeng_20130405_rIgG3.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 231 3.97 0.00 0 5 50 2 718.37732 1435.74736 5.97 36.26 3358 3358 MS2 25/32 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.95 0.00 0 40 3 2 665.36841 1329.72954 2.59 42.48 5417 5417 MS2 19/22 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 170 3.89 0.00 0 5 18 2 632.35431 1263.70134 5.51 41.35 4591 4591 MS2 18/20 Linfeng_20130408_Smad2_10.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 251 3.83 0.00 0 9 50 2 718.37720 1435.74712 5.80 36.32 3455 3455 MS2 25/32 Linfeng_20130405_rIgG3.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 6 2 P02538;P04259 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 160 3.83 0.00 0 0 50 3 1024.14734 3070.42746 5.91 40.39 4637 4637 MS2 31/104 Linfeng_20130408_Smad2_1.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 226 3.82 0.00 0 5 3 2 590.30682 1179.60637 5.00 38.61 4093 4093 MS2 17/18 Linfeng_20130405_rIgG7.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 224 3.82 0.00 0 4 5 2 590.30859 1179.60991 8.00 38.49 3957 3957 MS2 17/18 Linfeng_20130408_Smad2_3.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 225 3.78 0.00 0 4 15 2 590.30872 1179.61016 8.21 38.42 3746 3746 MS2 17/18 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 3.77 0.00 0 20 5 2 665.36890 1329.73052 3.33 42.60 5408 5408 MS2 19/22 Linfeng_20130405_rIgG10.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 249 3.76 0.00 0 4 12 2 590.30817 1179.60906 7.28 38.53 4027 4027 MS2 17/18 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 197 3.76 0.00 0 19 20 2 632.35242 1263.69756 2.51 41.55 4965 4965 MS2 18/20 Linfeng_20130408_Smad2_3.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 202 3.75 0.00 0 15 50 2 799.88672 1598.76616 4.35 38.69 4427 4427 MS2 17/32 Linfeng_20130405_rIgG4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 227 3.75 0.00 0 5 18 2 590.30884 1179.61040 8.42 38.40 4023 4023 MS2 17/18 Linfeng_20130408_Smad2_4.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 236 3.75 0.00 0 4 25 2 590.30829 1179.60930 7.48 38.24 3977 3977 MS2 17/18 Linfeng_20130408_Smad2_9.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 227 3.71 0.00 0 10 23 2 590.30823 1179.60918 7.38 38.38 4096 4096 MS2 17/18 Linfeng_20130408_Smad2_5.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 204 3.71 0.00 0 6 4 2 632.35388 1263.70049 4.83 41.63 5251 5251 MS2 18/20 Linfeng_20130405_rIgG3.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 193 3.69 0.00 0 11 50 2 799.88812 1598.76897 6.11 38.52 3846 3846 MS2 17/32 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.69 0.00 0 11 12 2 632.35291 1263.69853 3.29 41.51 4811 4811 MS2 18/20 Linfeng_20130408_Smad2_6.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 281 3.66 0.00 0 13 50 2 590.30920 1179.61113 9.04 38.39 3804 3804 MS2 17/18 Linfeng_20130408_Smad2_6.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 271 3.65 0.00 0 0 50 2 718.37909 1435.75090 8.44 36.10 3094 3094 MS2 19/32 Linfeng_20130408_Smad2_7.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 255 3.65 0.00 0 29 8 2 590.30640 1179.60552 4.28 38.59 4163 4163 MS2 17/18 Linfeng_20130405_rIgG3.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.65 0.00 0 18 34 2 632.35278 1263.69829 3.09 41.59 4776 4776 MS2 18/20 Linfeng_20130408_Smad2_2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 228 3.65 0.00 0 7 49 2 590.30841 1179.60954 7.69 38.22 4089 4089 MS2 17/18 Linfeng_20130408_Smad2_8.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 255 3.64 0.00 0 6 9 2 590.30634 1179.60539 4.17 38.66 3971 3971 MS2 17/18 Linfeng_20130405_rIgG10.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 219 3.63 0.00 0 20 4 2 590.30658 1179.60588 4.59 38.59 4196 4196 MS2 17/18 Linfeng_20130405_rIgG2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 223 3.63 0.00 0 7 14 2 590.30865 1179.61003 8.11 38.56 3793 3793 MS2 17/18 Linfeng_20130408_Smad2_2.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 254 3.62 0.00 0 6 4 2 590.30591 1179.60454 3.45 38.59 4373 4373 MS2 17/18 Linfeng_20130405_rIgG9.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 242 3.61 0.00 0 5 50 2 590.30835 1179.60942 7.59 38.10 3537 3537 MS2 17/18 Linfeng_20130408_Smad2_10.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 223 3.60 0.00 0 11 7 2 590.30688 1179.60649 5.10 38.62 4167 4167 MS2 17/18 Linfeng_20130405_rIgG6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 211 3.59 0.00 0 17 38 2 632.35272 1263.69817 3.00 41.49 5035 5035 MS2 18/20 Linfeng_20130408_Smad2_4.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 3.59 0.00 0 16 50 2 799.88776 1598.76824 5.65 38.60 4050 4050 MS2 17/32 Linfeng_20130408_Smad2_1.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 266 3.54 0.00 0 6 50 2 718.37952 1435.75176 9.03 35.82 2901 2901 MS2 16/32 Linfeng_20130408_Smad2_10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 220 3.54 0.00 0 15 36 2 632.35333 1263.69939 3.96 41.53 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_7.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 232 3.54 0.00 0 27 10 2 590.30658 1179.60588 4.59 38.63 4063 4063 MS2 17/18 Linfeng_20130405_rIgG1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 3 2 2 632.35370 1263.70012 4.54 41.63 5266 5266 MS2 18/20 Linfeng_20130405_rIgG2.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 239 3.51 0.00 0 2 7 2 704.36304 1407.71880 5.18 42.02 5415 5415 MS2 18/22 Linfeng_20130408_Smad2_8.raw High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 243 3.46 0.00 1 12 38 2 679.37189 1357.73650 3.13 39.45 4461 4461 MS2 19/22 Linfeng_20130405_rIgG3.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 258 3.45 0.00 0 30 8 2 590.30615 1179.60503 3.86 38.56 4467 4467 MS2 17/18 Linfeng_20130405_rIgG5.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 256 3.43 0.00 0 2 29 2 945.99530 1890.98332 6.57 42.74 5578 5578 MS2 18/28 Linfeng_20130405_rIgG1.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 184 3.42 0.00 0 8 50 2 513.76489 1026.52251 0.99 37.98 3791 3791 MS2 15/18 Linfeng_20130408_Smad2_3.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 252 3.40 0.00 0 0 50 2 945.99530 1890.98332 6.57 42.70 5166 5166 MS2 19/28 Linfeng_20130408_Smad2_2.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.40 0.00 0 3 12 3 630.99792 1890.97922 4.40 42.58 5639 5639 MS2 23/56 Linfeng_20130408_Smad2_8.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 166 3.39 0.00 0 10 49 2 513.76544 1026.52361 2.06 38.08 3915 3915 MS2 15/18 Linfeng_20130405_rIgG7.raw High GSGGLGGAcGGAGFGSR Unambiguous 5 2 P02538;P04259 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 3.39 0.00 0 23 16 2 712.82373 1424.64018 4.60 36.90 3650 3650 MS2 20/32 Linfeng_20130405_rIgG3.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 244 3.38 0.00 0 6 17 2 704.36243 1407.71758 4.32 41.97 5265 5265 MS2 18/22 Linfeng_20130408_Smad2_9.raw High ATGGGLSSVGGGSSTIK Unambiguous 2 1 P04259 CID 1.0000 0.0000 1 1 251 3.37 0.00 0 14 50 2 718.37885 1435.75041 8.10 36.10 3136 3136 MS2 24/32 Linfeng_20130408_Smad2_6.raw High RGFSANSAR Unambiguous 4 2 P02538;P04259 CID 1.0000 0.0000 1 1 254 3.32 0.00 1 17 50 2 483.25269 965.49809 7.14 31.69 2090 2090 MS2 13/16 Linfeng_20130408_Smad2_1.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 184 3.30 0.00 0 19 50 2 513.76495 1026.52263 1.11 37.71 3806 3806 MS2 14/18 Linfeng_20130408_Smad2_9.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 257 3.29 0.00 0 7 24 2 704.36243 1407.71758 4.32 42.06 4941 4941 MS2 18/22 Linfeng_20130408_Smad2_7.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 169 3.28 0.00 0 18 39 2 513.76538 1026.52349 1.94 38.17 3798 3798 MS2 15/18 Linfeng_20130405_rIgG10.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 245 3.27 0.00 0 6 19 2 704.36121 1407.71514 2.58 42.12 5274 5274 MS2 18/22 Linfeng_20130408_Smad2_1.raw High YEELQITAGR Unambiguous 3 2 P04264;P04259 CID 1.0000 0.0000 1 1 259 3.27 0.00 0 26 24 2 590.30634 1179.60539 4.17 38.54 4478 4478 MS2 17/18 Linfeng_20130405_rIgG8.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 3.26 0.00 1 21 50 3 378.52829 1133.57032 7.34 33.89 2644 2644 MS2 20/32 Linfeng_20130408_Smad2_1.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 239 3.22 0.00 0 4 21 2 704.36261 1407.71794 4.58 42.06 5017 5017 MS2 18/22 Linfeng_20130408_Smad2_6.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 245 3.17 0.00 0 7 10 2 704.36243 1407.71758 4.32 42.20 5361 5361 MS2 18/22 Linfeng_20130405_rIgG1.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 252 3.17 0.00 0 5 25 2 704.36481 1407.72234 7.70 42.10 5170 5170 MS2 18/22 Linfeng_20130408_Smad2_3.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 161 3.16 0.00 0 14 50 2 513.76526 1026.52324 1.70 37.91 3653 3653 MS2 15/18 Linfeng_20130408_Smad2_6.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 255 3.13 0.00 0 0 50 2 704.36285 1407.71843 4.92 42.14 4967 4967 MS2 17/22 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.09 0.00 0 25 50 2 554.27972 1107.55217 8.32 35.15 2860 2860 MS2 15/16 Linfeng_20130408_Smad2_6.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 132 3.07 0.00 0 47 50 2 606.78357 1212.55986 5.51 37.25 3686 3686 MS2 15/18 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.05 0.00 0 11 50 2 554.27979 1107.55229 8.44 35.11 3020 3020 MS2 15/16 Linfeng_20130408_Smad2_4.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 3.04 0.00 0 10 16 2 602.32550 1203.64372 5.70 40.36 4424 4424 MS2 16/18 Linfeng_20130408_Smad2_6.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 149 3.01 0.00 0 18 50 2 513.76410 1026.52092 -0.55 37.99 3850 3850 MS2 15/18 Linfeng_20130408_Smad2_1.raw High ADTLTDEINFLR Unambiguous 5 2 P02538;P04259 CID 1.0000 0.0000 1 1 216 3.01 0.00 0 9 6 2 704.36322 1407.71916 5.44 42.16 5468 5468 MS2 18/22 Linfeng_20130405_rIgG3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 211 3.00 0.00 0 27 50 2 554.27936 1107.55144 7.66 35.31 2870 2870 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 184 2.99 0.00 0 16 20 2 632.35297 1263.69866 3.38 41.61 5077 5077 MS2 17/20 Linfeng_20130408_Smad2_1.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 181 2.98 0.00 0 32 50 2 513.76813 1026.52898 7.29 38.00 3612 3612 MS2 15/18 Linfeng_20130408_Smad2_7.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 348 2.98 0.00 0 9 11 2 602.32538 1203.64348 5.50 40.44 4587 4587 MS2 17/18 Linfeng_20130408_Smad2_3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 198 2.97 0.00 0 11 26 2 554.27838 1107.54949 5.90 34.98 3107 3107 MS2 14/16 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.96 0.00 0 10 12 2 602.32544 1203.64360 5.60 40.48 4665 4665 MS2 17/18 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 202 2.94 0.00 0 7 50 2 554.27856 1107.54985 6.23 35.01 2939 2939 MS2 15/16 Linfeng_20130408_Smad2_9.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 184 2.91 0.00 0 6 50 2 513.76489 1026.52251 0.99 37.89 3933 3933 MS2 14/18 Linfeng_20130408_Smad2_5.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 125 2.90 0.00 0 17 50 2 606.78448 1212.56169 7.02 37.04 3602 3602 MS2 16/18 Linfeng_20130408_Smad2_9.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 351 2.89 0.00 0 5 8 2 602.32544 1203.64360 5.60 40.18 4628 4628 MS2 17/18 Linfeng_20130408_Smad2_9.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 111 2.88 0.00 0 28 50 2 606.78278 1212.55828 4.20 36.92 3718 3718 MS2 15/18 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 353 2.86 0.00 0 15 50 2 602.32599 1203.64470 6.51 40.35 4354 4354 MS2 16/18 Linfeng_20130408_Smad2_7.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 2.85 0.00 0 16 50 2 799.88849 1598.76970 6.56 38.65 3823 3823 MS2 14/32 Linfeng_20130408_Smad2_2.raw High AEAESWYQTK Unambiguous 7 2 P02538;P04259 CID 1.0000 0.0000 1 1 123 2.85 0.00 0 14 50 2 606.78461 1212.56194 7.22 37.21 3676 3676 MS2 15/18 Linfeng_20130408_Smad2_4.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 258 2.85 0.00 0 17 28 2 611.82208 1222.63689 4.45 39.10 4380 4380 MS2 16/20 Linfeng_20130408_Smad2_8.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.83 0.00 0 11 12 2 602.32568 1203.64409 6.01 40.19 4740 4740 MS2 17/18 Linfeng_20130408_Smad2_8.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 2.79 0.00 0 27 50 2 554.27930 1107.55132 7.55 35.14 2840 2840 MS2 15/16 Linfeng_20130408_Smad2_7.raw High NKLEGLEDALQK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 243 2.76 0.00 1 42 50 2 679.37354 1357.73979 5.56 39.12 4390 4390 MS2 11/22 Linfeng_20130408_Smad2_8.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 145 2.76 0.00 0 63 50 2 513.76459 1026.52190 0.40 37.88 3580 3580 MS2 14/18 Linfeng_20130408_Smad2_7.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 181 2.70 0.00 0 35 50 2 513.76764 1026.52800 6.34 37.94 3874 3874 MS2 15/18 Linfeng_20130408_Smad2_4.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 232 2.68 0.00 0 34 50 2 611.82220 1222.63713 4.65 39.30 4313 4313 MS2 13/20 Linfeng_20130408_Smad2_4.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 347 2.68 0.00 0 10 28 2 602.32599 1203.64470 6.51 40.53 4415 4415 MS2 17/18 Linfeng_20130408_Smad2_2.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 235 2.68 0.00 0 23 50 2 554.27667 1107.54607 2.81 35.10 3104 3104 MS2 14/16 Linfeng_20130408_Smad2_5.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 2.66 0.00 0 32 15 2 602.32538 1203.64348 5.50 40.37 4752 4752 MS2 16/18 Linfeng_20130408_Smad2_5.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 244 2.65 0.00 0 22 50 2 611.82361 1222.63994 6.94 39.25 4010 4010 MS2 13/20 Linfeng_20130408_Smad2_7.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 222 2.64 0.00 0 69 50 2 554.28033 1107.55339 9.43 35.24 3052 3052 MS2 14/16 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 199 2.64 0.00 0 18 50 2 554.27930 1107.55132 7.55 34.85 2654 2654 MS2 15/16 Linfeng_20130408_Smad2_10.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 257 2.64 0.00 0 0 39 2 945.99219 1890.97710 3.28 42.70 5503 5503 MS2 14/28 Linfeng_20130408_Smad2_1.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 258 2.63 0.00 0 13 50 2 611.82166 1222.63603 3.75 39.34 4230 4230 MS2 16/20 Linfeng_20130408_Smad2_3.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 227 2.63 0.00 0 11 50 2 611.82434 1222.64141 8.14 39.09 4263 4263 MS2 15/20 Linfeng_20130408_Smad2_9.raw High TAAENEFVTLK Unambiguous 6 2 P02538;P04259 CID 1.0000 0.0000 1 1 237 2.62 0.00 0 69 50 2 611.82281 1222.63835 5.65 39.26 4076 4076 MS2 13/20 Linfeng_20130408_Smad2_6.raw High GSGGLGGAcGGAGFGSR Unambiguous 5 2 P02538;P04259 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 110 2.61 0.00 0 34 50 2 712.82538 1424.64348 6.91 36.62 3462 3462 MS2 13/32 Linfeng_20130408_Smad2_9.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 2.60 0.00 1 46 50 2 567.29004 1133.57280 9.53 33.82 2484 2484 MS2 14/16 Linfeng_20130408_Smad2_6.raw High ISIGGGScAISGGYGSR Unambiguous 6 2 P02538;P04259 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.58 0.00 0 0 50 2 799.88824 1598.76921 6.26 38.54 3972 3972 MS2 15/32 Linfeng_20130408_Smad2_3.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw High SGFSSISVSR Unambiguous 4 1 P04259 CID 1.0000 0.0000 1 1 186 2.54 0.00 0 18 50 2 513.76538 1026.52349 1.94 38.12 3651 3651 MS2 15/18 Linfeng_20130408_Smad2_2.raw P68871 Hemoglobin subunit beta OS=Homo sapiens GN=HBB PE=1 SV=2 - [HBB_HUMAN] 36.05 2 4 4 4 14.64 36.05 4 4 147 16.0 7.28 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FFESFGDLSTPDAVmGNPK Unambiguous 2 1 P68871 M15(Oxidation) CID 1.0000 0.0000 1 1 120 4.73 0.00 0 6 19 2 1037.98059 2074.95391 5.38 41.68 5106 5106 MS2 22/36 Linfeng_20130408_Smad2_4.raw High VNVDEVGGEALGR Unambiguous 2 1 P68871 CID 1.0000 0.0000 1 1 200 3.70 0.00 0 3 41 2 657.84076 1314.67424 7.10 38.48 4049 4049 MS2 20/24 Linfeng_20130408_Smad2_4.raw High VVAGVANALAHK Unambiguous 1 1 P68871 CID 1.0000 0.0000 1 1 83 3.31 0.00 0 50 50 2 575.34503 1149.68279 7.70 36.61 3483 3483 MS2 17/22 Linfeng_20130408_Smad2_4.raw High SAVTALWGK Unambiguous 2 1 P68871 CID 1.0000 0.0000 1 1 232 2.90 0.00 0 9 50 2 466.76736 932.52745 7.95 40.68 4757 4757 MS2 14/16 Linfeng_20130408_Smad2_4.raw E9PLF4 Heat shock cognate 71 kDa protein (Fragment) OS=Homo sapiens GN=HSPA8 PE=3 SV=1 - [E9PLF4_HUMAN] 35.83 20 2 5 8 26.98 35.83 5 8 187 20.4 7.33 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQVAmNPTNTVFDAK Unambiguous 11 1 E9PLF4 M5(Oxidation) CID 1.0000 0.0000 1 1 205 4.11 0.00 0 6 50 2 833.40576 1665.80425 8.45 37.97 3886 3886 MS2 20/28 Linfeng_20130408_Smad2_4.raw High IINEPTAAAIAYGLDK Unambiguous 16 2 B4DEF7;E9PLF4 CID 1.0000 0.0000 1 1 210 4.02 0.00 0 11 50 2 830.45697 1659.90666 6.85 41.37 4991 4991 MS2 26/30 Linfeng_20130408_Smad2_4.raw High NQVAmNPTNTVFDAK Unambiguous 11 1 E9PLF4 M5(Oxidation) CID 1.0000 0.0000 1 1 202 3.86 0.00 0 4 50 2 833.40594 1665.80461 8.67 37.84 3844 3844 MS2 18/28 Linfeng_20130408_Smad2_9.raw High NQVAMNPTNTVFDAK Unambiguous 11 1 E9PLF4 CID 1.0000 0.0000 1 1 194 3.54 0.00 0 0 50 2 825.40588 1649.80449 5.59 39.39 4364 4364 MS2 20/28 Linfeng_20130408_Smad2_9.raw High NQVAMNPTNTVFDAK Unambiguous 11 1 E9PLF4 CID 1.0000 0.0000 1 1 213 3.52 0.00 0 15 50 2 825.40833 1649.80937 8.55 39.50 4378 4378 MS2 20/28 Linfeng_20130408_Smad2_4.raw High DAGTIAGLNVLR Unambiguous 10 1 E9PLF4 CID 1.0000 0.0000 1 1 213 2.76 0.00 0 33 23 2 600.34308 1199.67888 3.79 41.47 5076 5076 MS2 15/22 Linfeng_20130408_Smad2_9.raw High TTPSYVAFTDTER Unambiguous 30 2 P08107;E9PLF4 CID 1.0000 0.0000 1 1 166 2.60 0.00 0 20 36 2 744.35852 1487.70976 5.68 39.33 4342 4342 MS2 18/24 Linfeng_20130408_Smad2_9.raw High VEIIANDQGNR Unambiguous 32 3 P08107;E9PLF4;B4DEF7 CID 1.0000 0.0000 1 2 225 2.57 0.00 0 20 50 2 614.82208 1228.63689 7.15 35.69 3157 3157 MS2 16/20 Linfeng_20130408_Smad2_9.raw B4DW52 "Actin, cytoplasmic 1, N-terminally processed OS=Homo sapiens GN=ACTB PE=2 SV=1 - [B4DW52_HUMAN]" 33.43 13 4 7 15 0.00 50.99 33.43 7 15 347 38.6 5.35 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLYANTVLSGGTTmYPGIADR Unambiguous 6 1 B4DW52 M14(Oxidation) CID 1.0000 0.0000 1 1 194 5.08 0.00 0 0 28 2 1116.04163 2231.07598 4.93 41.35 5031 5031 MS2 21/40 Linfeng_20130408_Smad2_9.raw High TTGIVMDSGDGVTHTVPIYEGYALPHAILR Unambiguous 4 1 B4DW52 CID 1.0000 0.0000 1 1 201 4.18 0.00 0 14 20 4 796.66351 3183.63222 5.59 41.61 5081 5081 MS2 44/174 Linfeng_20130408_Smad2_4.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 B4DW52 CID 1.0000 0.0000 1 1 101 4.16 0.00 0 5 50 2 977.54388 1954.08049 8.18 39.96 4528 4528 MS2 22/34 Linfeng_20130408_Smad2_4.raw High TTGIVMDSGDGVTHTVPIYEGYALPHAILR Unambiguous 4 1 B4DW52 CID 1.0000 0.0000 1 1 210 4.02 0.00 0 9 20 4 796.66211 3183.62661 3.82 41.57 5117 5117 MS2 43/174 Linfeng_20130408_Smad2_9.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 B4DW52 CID 1.0000 0.0000 1 1 108 3.88 0.00 0 5 50 2 977.54230 1954.07732 6.56 39.74 4481 4481 MS2 20/34 Linfeng_20130408_Smad2_9.raw High TTGIVmDSGDGVTHTVPIYEGYALPHAILR Unambiguous 4 1 B4DW52 M6(Oxidation) CID 1.0000 0.0000 1 1 227 3.61 0.00 0 2 19 4 800.66272 3199.62905 6.15 41.36 4987 4987 MS2 43/174 Linfeng_20130408_Smad2_4.raw High SYELPDGQVITIGNER Unambiguous 18 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 250 3.36 0.00 0 0 50 2 895.95392 1790.90056 4.78 40.88 4865 4865 MS2 20/30 Linfeng_20130408_Smad2_9.raw High SYELPDGQVITIGNER Unambiguous 18 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 211 3.33 0.00 0 16 19 2 895.95337 1790.89946 4.17 41.47 5030 5030 MS2 20/30 Linfeng_20130408_Smad2_4.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 B4DW52 CID 1.0000 0.0000 1 1 132 3.19 0.00 0 7 50 3 652.03113 1954.07883 7.33 39.85 4489 4489 MS2 23/68 Linfeng_20130408_Smad2_4.raw High EITALAPSTMK Unambiguous 17 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 240 2.85 0.00 0 32 50 2 581.31793 1161.62859 8.73 38.59 4084 4084 MS2 12/20 Linfeng_20130408_Smad2_4.raw High AGFAGDDAPR Unambiguous 23 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 123 2.85 0.00 0 12 50 2 488.73105 976.45482 6.63 34.62 2812 2812 MS2 16/18 Linfeng_20130408_Smad2_9.raw High EITALAPSTMK Unambiguous 17 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 254 2.73 0.00 0 29 50 2 581.31781 1161.62834 8.52 38.37 4021 4021 MS2 16/20 Linfeng_20130408_Smad2_9.raw High EITALAPSTmK Unambiguous 17 2 Q5T8M8;B4DW52 M10(Oxidation) CID 1.0000 0.0000 1 1 294 2.60 0.00 0 32 50 2 589.31445 1177.62163 7.02 36.88 3570 3570 MS2 15/20 Linfeng_20130408_Smad2_4.raw High EITALAPSTmK Unambiguous 17 2 Q5T8M8;B4DW52 M10(Oxidation) CID 1.0000 0.0000 1 1 264 2.59 0.00 0 16 50 2 589.31458 1177.62187 7.22 36.64 3467 3467 MS2 17/20 Linfeng_20130408_Smad2_9.raw High GYSFTTTAER Unambiguous 6 1 B4DW52 CID 1.0000 0.0000 1 1 123 2.55 0.00 0 30 50 2 566.77026 1132.53325 5.55 36.92 3561 3561 MS2 16/18 Linfeng_20130408_Smad2_9.raw B7Z4V2 "Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=2 SV=1 - [B7Z4V2_HUMAN]" 32.03 7 16 16 33 69.91 27.67 14 18 57.44 27.07 13 15 665 72.4 5.94 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SQVFSTAADGQTQVEIK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 263 5.43 0.00 0 14 50 2 904.96332 1808.91936 9.29 38.69 4118 4118 MS2 21/32 Linfeng_20130408_Smad2_4.raw High VINEPTAAALAYGLDK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 207 5.01 0.00 0 14 11 2 823.44690 1645.88652 4.18 41.40 5394 5394 MS2 25/30 Linfeng_20130405_rIgG4.raw High VINEPTAAALAYGLDK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 208 5.00 0.00 0 9 17 2 823.44781 1645.88835 5.29 41.26 4949 4949 MS2 26/30 Linfeng_20130408_Smad2_4.raw High VINEPTAAALAYGLDK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 240 4.95 0.00 0 2 2 3 549.30042 1645.88669 4.28 41.42 5401 5401 MS2 33/60 Linfeng_20130405_rIgG4.raw High SQVFSTAADGQTQVEIK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 270 4.91 0.00 0 0 50 2 904.95953 1808.91179 5.10 38.78 4454 4454 MS2 23/32 Linfeng_20130405_rIgG4.raw High VINEPTAAALAYGLDK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 239 4.70 0.00 0 30 14 3 549.30078 1645.88779 4.95 41.27 4953 4953 MS2 31/60 Linfeng_20130408_Smad2_4.raw High SDIGEVILVGGMTR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 282 4.39 0.00 0 6 5 2 723.88873 1446.77019 5.54 41.96 5626 5626 MS2 22/26 Linfeng_20130405_rIgG4.raw High SDIGEVILVGGmTR Unambiguous 4 1 B7Z4V2 M12(Oxidation) CID 1.0000 0.0000 1 1 288 4.38 0.00 0 12 15 2 731.88666 1462.76604 6.11 41.19 4925 4925 MS2 21/26 Linfeng_20130408_Smad2_4.raw High EQQIVIQSSGGLSK Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 234 4.08 0.00 0 1 50 2 737.40118 1473.79509 2.90 37.45 3732 3732 MS2 22/26 Linfeng_20130408_Smad2_4.raw High AQFEGIVTDLIR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 222 4.05 0.00 0 4 6 2 681.37817 1361.74907 4.89 42.20 5299 5299 MS2 19/22 Linfeng_20130408_Smad2_4.raw High ERVEAVNmAEGIIHDTETK Unambiguous 3 1 B7Z4V2 M8(Oxidation) CID 1.0000 0.0000 1 1 233 4.02 0.00 1 11 37 3 720.02289 2158.05411 4.41 38.99 4526 4526 MS2 34/72 Linfeng_20130405_rIgG4.raw High SDIGEVILVGGMTR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 284 3.99 0.00 0 20 50 2 723.88849 1446.76970 5.20 41.84 5166 5166 MS2 21/26 Linfeng_20130408_Smad2_4.raw High VQQTVQDLFGR Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 210 3.94 0.00 0 25 50 2 645.84833 1290.68938 7.16 40.66 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_4.raw High EQQIVIQSSGGLSK Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 217 3.94 0.00 0 3 30 2 737.40167 1473.79607 3.57 37.63 4084 4084 MS2 21/26 Linfeng_20130405_rIgG4.raw High SDIGEVILVGGmTR Unambiguous 4 1 B7Z4V2 M12(Oxidation) CID 1.0000 0.0000 1 1 265 3.93 0.00 0 12 4 2 731.88428 1462.76128 2.86 41.32 5363 5363 MS2 19/26 Linfeng_20130405_rIgG4.raw High DAGQISGLNVLR Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 211 3.80 0.00 0 13 3 2 621.84650 1242.68572 4.49 41.15 5297 5297 MS2 19/22 Linfeng_20130405_rIgG4.raw High LYSPSQIGAFVLmK Unambiguous 2 1 B7Z4V2 M13(Oxidation) CID 1.0000 0.0000 1 1 219 3.80 0.00 0 11 12 2 785.42566 1569.84404 6.02 42.13 5694 5694 MS2 19/26 Linfeng_20130405_rIgG4.raw High AQFEGIVTDLIR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 226 3.75 0.00 0 3 9 2 681.37775 1361.74822 4.26 42.32 5771 5771 MS2 19/22 Linfeng_20130405_rIgG4.raw High LLGQFTLIGIPPAPR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 20 3.66 0.00 0 2 3 2 796.98419 1592.96111 5.49 42.56 5871 5871 MS2 22/28 Linfeng_20130405_rIgG4.raw High MKETAENYLGHTAK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 258 3.65 0.00 1 25 50 3 531.59900 1592.78244 5.44 35.11 3290 3290 MS2 21/52 Linfeng_20130405_rIgG4.raw High mKETAENYLGHTAK Unambiguous 3 1 B7Z4V2 M1(Oxidation) CID 1.0000 0.0000 1 1 246 3.62 0.00 1 43 50 3 536.93176 1608.78073 7.48 34.28 3023 3023 MS2 27/52 Linfeng_20130405_rIgG4.raw High DAGQISGLNVLR Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 213 3.55 0.00 0 7 25 2 621.84851 1242.68974 7.73 41.03 4872 4872 MS2 19/22 Linfeng_20130408_Smad2_4.raw High ETAENYLGHTAK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 190 3.47 0.00 0 18 50 2 667.32581 1333.64433 4.52 35.39 3377 3377 MS2 14/22 Linfeng_20130405_rIgG4.raw High QAASSLQQASLK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 251 3.37 0.00 0 17 50 2 616.33893 1231.67058 5.23 35.49 3406 3406 MS2 15/22 Linfeng_20130405_rIgG4.raw High NAVITVPAYFNDSQR Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 200 3.35 0.00 0 8 42 2 847.93335 1694.85942 5.72 41.20 4932 4932 MS2 20/28 Linfeng_20130408_Smad2_4.raw High TTPSVVAFTADGER Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 242 3.33 0.00 0 30 41 2 725.86523 1450.72319 4.05 39.78 4804 4804 MS2 20/26 Linfeng_20130405_rIgG4.raw High TTPSVVAFTADGER Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 262 3.30 0.00 0 10 50 2 725.86908 1450.73088 9.35 39.56 4398 4398 MS2 19/26 Linfeng_20130408_Smad2_4.raw High QAASSLQQASLK Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 247 3.29 0.00 0 13 50 2 616.33954 1231.67180 6.22 35.38 3107 3107 MS2 16/22 Linfeng_20130408_Smad2_4.raw High VQQTVQDLFGR Unambiguous 3 1 B7Z4V2 CID 1.0000 0.0000 1 1 235 3.17 0.00 0 51 24 2 645.84674 1290.68620 4.71 40.88 5192 5192 MS2 17/20 Linfeng_20130405_rIgG4.raw High LYSPSQIGAFVLMK Unambiguous 2 1 B7Z4V2 CID 1.0000 0.0000 1 1 169 3.14 0.00 0 7 8 2 777.42719 1553.84709 4.77 42.49 5843 5843 MS2 22/26 Linfeng_20130405_rIgG4.raw High LYSPSQIGAFVLmK Unambiguous 2 1 B7Z4V2 M13(Oxidation) CID 1.0000 0.0000 1 1 192 2.95 0.00 0 1 27 2 785.42548 1569.84368 5.78 41.99 5222 5222 MS2 19/26 Linfeng_20130408_Smad2_4.raw High QAVTNPNNTFYATK Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 180 2.84 0.00 0 7 50 2 784.89539 1568.78349 8.35 36.82 3550 3550 MS2 14/26 Linfeng_20130408_Smad2_4.raw High LLGQFTLIGIPPAPR Unambiguous 4 1 B7Z4V2 CID 1.0000 0.0000 1 1 24 2.59 0.00 0 7 50 2 796.98303 1592.95879 4.03 42.41 5375 5375 MS2 22/28 Linfeng_20130408_Smad2_4.raw P13647 "Keratin, type II cytoskeletal 5 OS=Homo sapiens GN=KRT5 PE=1 SV=3 - [K2C5_HUMAN]" 31.53 9 11 17 147 172.87 21.36 10 49 327.86 31.53 17 98 590 62.3 7.74 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 156 4.51 0.00 0 6 29 2 705.84509 1410.68291 2.42 38.18 3906 3906 MS2 23/28 Linfeng_20130405_rIgG1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 156 4.49 0.00 0 7 50 2 705.84760 1410.68791 5.97 37.94 3951 3951 MS2 23/28 Linfeng_20130408_Smad2_5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 4.49 0.00 0 16 50 2 705.84845 1410.68962 7.18 37.97 3670 3670 MS2 23/28 Linfeng_20130408_Smad2_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 163 4.41 0.00 0 0 32 2 705.84589 1410.68450 3.54 38.14 4006 4006 MS2 23/28 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 252 4.36 0.00 0 21 3 2 665.36847 1329.72966 2.69 42.53 5104 5104 MS2 20/22 Linfeng_20130408_Smad2_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 4.36 0.00 0 15 33 2 705.84540 1410.68352 2.85 38.12 4296 4296 MS2 23/28 Linfeng_20130405_rIgG5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.36 0.00 0 5 50 2 705.84662 1410.68596 4.58 38.08 3877 3877 MS2 23/28 Linfeng_20130408_Smad2_1.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.32 0.00 0 10 1 2 665.36890 1329.73052 3.33 42.40 5568 5568 MS2 20/22 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 236 4.32 0.00 0 9 1 2 665.36951 1329.73174 4.25 42.45 5533 5533 MS2 20/22 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 213 4.31 0.00 0 18 3 2 665.37012 1329.73296 5.16 42.54 6058 6058 MS2 20/22 Linfeng_20130405_rIgG8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.31 0.00 0 12 1 2 665.36761 1329.72795 1.40 42.49 5312 5312 MS2 20/22 Linfeng_20130408_Smad2_3.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 4.30 0.00 0 3 50 2 705.84790 1410.68852 6.40 38.13 3655 3655 MS2 22/28 Linfeng_20130408_Smad2_2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 4.29 0.00 0 16 3 2 665.36896 1329.73064 3.42 42.40 5418 5418 MS2 20/22 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.27 0.00 0 25 1 2 665.36945 1329.73161 4.15 42.58 5882 5882 MS2 19/22 Linfeng_20130405_rIgG4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 212 4.25 0.00 0 25 3 2 665.37030 1329.73332 5.44 42.56 5867 5867 MS2 19/22 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.23 0.00 0 17 0 2 665.36865 1329.73003 2.96 42.56 5653 5653 MS2 20/22 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 15 1 2 665.36871 1329.73015 3.05 42.45 5159 5159 MS2 19/22 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 18 4 2 665.36884 1329.73039 3.24 42.34 4964 4964 MS2 19/22 Linfeng_20130408_Smad2_10.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.19 0.00 0 27 4 2 665.36908 1329.73088 3.60 42.42 5072 5072 MS2 19/22 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 12 2 2 665.37012 1329.73296 5.16 42.53 6004 6004 MS2 20/22 Linfeng_20130405_rIgG5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 14 2 2 665.37012 1329.73296 5.16 42.59 5628 5628 MS2 19/22 Linfeng_20130405_rIgG6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 232 4.13 0.00 0 33 1 2 665.36914 1329.73100 3.69 42.52 5619 5619 MS2 19/22 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 240 4.12 0.00 0 37 4 2 665.36969 1329.73210 4.52 42.42 5377 5377 MS2 19/22 Linfeng_20130408_Smad2_4.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 4.08 0.00 0 25 50 2 705.84735 1410.68743 5.62 37.80 3832 3832 MS2 20/28 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 237 4.03 0.00 0 26 1 2 665.36890 1329.73052 3.33 42.56 5529 5529 MS2 19/22 Linfeng_20130405_rIgG7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 244 3.99 0.00 0 34 1 2 665.36993 1329.73259 4.89 42.57 5509 5509 MS2 19/22 Linfeng_20130405_rIgG1.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.98 0.00 0 4 8 3 630.99792 1890.97922 4.40 42.72 5701 5701 MS2 28/56 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.95 0.00 0 40 3 2 665.36841 1329.72954 2.59 42.48 5417 5417 MS2 19/22 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 170 3.89 0.00 0 5 18 2 632.35431 1263.70134 5.51 41.35 4591 4591 MS2 18/20 Linfeng_20130408_Smad2_10.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 238 3.87 0.00 0 7 50 2 705.87103 1410.73479 8.79 38.33 4000 4000 MS2 19/26 Linfeng_20130408_Smad2_4.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 231 3.87 0.00 0 0 33 2 705.86823 1410.72917 4.81 38.56 4383 4383 MS2 20/26 Linfeng_20130405_rIgG4.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 221 3.85 0.00 0 2 50 2 705.86768 1410.72807 4.03 38.14 4061 4061 MS2 20/26 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 3.77 0.00 0 20 5 2 665.36890 1329.73052 3.33 42.60 5408 5408 MS2 19/22 Linfeng_20130405_rIgG10.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 212 3.76 0.00 0 10 50 2 705.87054 1410.73381 8.10 38.02 3512 3512 MS2 20/26 Linfeng_20130408_Smad2_10.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 263 3.76 0.00 0 26 33 2 572.31982 1143.63237 5.89 39.84 4203 4203 MS2 16/18 Linfeng_20130408_Smad2_2.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 237 3.76 0.00 0 4 50 2 720.36646 1439.72563 9.07 38.12 3938 3938 MS2 25/32 Linfeng_20130408_Smad2_9.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 197 3.76 0.00 0 19 20 2 632.35242 1263.69756 2.51 41.55 4965 4965 MS2 18/20 Linfeng_20130408_Smad2_3.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 298 3.72 0.00 0 32 8 2 572.31866 1143.63005 3.86 39.97 4513 4513 MS2 16/18 Linfeng_20130405_rIgG1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 3.71 0.00 0 12 50 2 705.84857 1410.68987 7.35 37.66 3394 3394 MS2 22/28 Linfeng_20130408_Smad2_10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 204 3.71 0.00 0 6 4 2 632.35388 1263.70049 4.83 41.63 5251 5251 MS2 18/20 Linfeng_20130405_rIgG3.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.69 0.00 0 11 12 2 632.35291 1263.69853 3.29 41.51 4811 4811 MS2 18/20 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.65 0.00 0 18 34 2 632.35278 1263.69829 3.09 41.59 4776 4776 MS2 18/20 Linfeng_20130408_Smad2_2.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 224 3.64 0.00 0 8 50 2 705.87012 1410.73296 7.49 38.32 3780 3780 MS2 20/26 Linfeng_20130408_Smad2_6.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 218 3.62 0.00 0 2 50 2 705.86884 1410.73039 5.67 38.46 4001 4001 MS2 20/26 Linfeng_20130408_Smad2_1.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 276 3.62 0.00 0 26 36 2 572.32013 1143.63298 6.42 39.78 4374 4374 MS2 16/18 Linfeng_20130408_Smad2_3.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 147 3.61 0.00 0 10 50 2 729.34180 1457.67632 7.65 40.57 4430 4430 MS2 19/22 Linfeng_20130408_Smad2_2.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 274 3.60 0.00 0 28 50 2 572.32043 1143.63359 6.95 39.69 4437 4437 MS2 16/18 Linfeng_20130408_Smad2_4.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 271 3.59 0.00 0 60 50 2 572.32031 1143.63335 6.74 39.41 3951 3951 MS2 16/18 Linfeng_20130408_Smad2_10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 211 3.59 0.00 0 17 38 2 632.35272 1263.69817 3.00 41.49 5035 5035 MS2 18/20 Linfeng_20130408_Smad2_4.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 278 3.56 0.00 0 38 40 2 572.32013 1143.63298 6.42 39.80 4450 4450 MS2 16/18 Linfeng_20130408_Smad2_1.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 287 3.54 0.00 0 43 19 2 572.31873 1143.63017 3.96 39.90 4613 4613 MS2 16/18 Linfeng_20130405_rIgG3.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 281 3.54 0.00 0 41 41 2 572.32001 1143.63274 6.21 39.76 4236 4236 MS2 16/18 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 220 3.54 0.00 0 15 36 2 632.35333 1263.69939 3.96 41.53 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_7.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 218 3.53 0.00 0 11 50 2 705.87054 1410.73381 8.10 38.47 3762 3762 MS2 16/26 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 3 2 2 632.35370 1263.70012 4.54 41.63 5266 5266 MS2 18/20 Linfeng_20130405_rIgG2.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 221 3.49 0.00 0 8 50 2 705.86902 1410.73076 5.93 38.10 3930 3930 MS2 19/26 Linfeng_20130408_Smad2_9.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 143 3.49 0.00 0 14 50 2 729.34113 1457.67497 6.73 40.24 4649 4649 MS2 19/22 Linfeng_20130408_Smad2_9.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 272 3.48 0.00 0 43 50 2 572.32001 1143.63274 6.21 39.68 4145 4145 MS2 16/18 Linfeng_20130408_Smad2_7.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 285 3.48 0.00 0 47 50 2 572.32068 1143.63408 7.38 39.52 4406 4406 MS2 16/18 Linfeng_20130408_Smad2_9.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 234 3.46 0.00 0 8 50 2 705.86768 1410.72807 4.03 38.56 4041 4041 MS2 20/26 Linfeng_20130405_rIgG1.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 236 3.44 0.00 0 44 50 2 572.32098 1143.63469 7.91 39.67 4516 4516 MS2 16/18 Linfeng_20130408_Smad2_5.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 256 3.43 0.00 0 2 29 2 945.99530 1890.98332 6.57 42.74 5578 5578 MS2 18/28 Linfeng_20130405_rIgG1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 P13647 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 3.41 0.00 0 10 50 2 705.84528 1410.68328 2.68 38.16 4050 4050 MS2 22/28 Linfeng_20130405_rIgG2.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 252 3.40 0.00 0 0 50 2 945.99530 1890.98332 6.57 42.70 5166 5166 MS2 19/28 Linfeng_20130408_Smad2_2.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 128 3.40 0.00 0 16 19 2 729.33942 1457.67156 4.38 40.64 5104 5104 MS2 19/22 Linfeng_20130405_rIgG4.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 304 3.40 0.00 0 3 12 3 630.99792 1890.97922 4.40 42.58 5639 5639 MS2 23/56 Linfeng_20130408_Smad2_8.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 138 3.39 0.00 0 20 50 2 729.34076 1457.67424 6.22 40.49 4670 4670 MS2 19/22 Linfeng_20130408_Smad2_1.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 228 3.38 0.00 0 14 50 2 720.36298 1439.71868 4.23 38.59 4086 4086 MS2 20/32 Linfeng_20130405_rIgG7.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 299 3.36 0.00 0 57 22 2 572.31873 1143.63017 3.96 39.89 4633 4633 MS2 16/18 Linfeng_20130405_rIgG2.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 182 3.35 0.00 0 5 29 2 649.82037 1298.63347 2.87 39.38 4310 4310 MS2 15/20 Linfeng_20130408_Smad2_1.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 191 3.34 0.00 0 13 50 2 649.82184 1298.63640 5.12 39.26 4382 4382 MS2 15/20 Linfeng_20130408_Smad2_5.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 193 3.34 0.00 0 14 28 2 597.79370 1194.58013 4.31 34.71 3236 3236 MS2 17/18 Linfeng_20130405_rIgG5.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 145 3.33 0.00 0 26 50 2 729.34027 1457.67327 5.55 40.40 4760 4760 MS2 18/22 Linfeng_20130408_Smad2_5.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 273 3.32 0.00 0 45 32 2 572.31903 1143.63078 4.50 39.89 4519 4519 MS2 16/18 Linfeng_20130405_rIgG7.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 204 3.31 0.00 0 10 50 2 597.79565 1194.58403 7.58 34.44 2750 2750 MS2 17/18 Linfeng_20130408_Smad2_9.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 244 3.30 0.00 0 14 50 2 705.86841 1410.72954 5.07 38.47 4047 4047 MS2 18/26 Linfeng_20130405_rIgG7.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 198 3.30 0.00 0 17 50 2 597.79553 1194.58379 7.37 34.34 2519 2519 MS2 17/18 Linfeng_20130408_Smad2_10.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 214 3.27 0.00 0 20 50 2 597.79498 1194.58269 6.45 34.44 2938 2938 MS2 17/18 Linfeng_20130408_Smad2_8.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 3.26 0.00 1 21 50 3 378.52829 1133.57032 7.34 33.89 2644 2644 MS2 20/32 Linfeng_20130408_Smad2_1.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 138 3.26 0.00 0 11 50 2 729.34167 1457.67607 7.48 40.41 4577 4577 MS2 17/22 Linfeng_20130408_Smad2_3.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 233 3.25 0.00 0 32 50 2 720.36322 1439.71916 4.57 38.58 4193 4193 MS2 21/32 Linfeng_20130405_rIgG2.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 76 50 2 572.31952 1143.63176 5.35 39.50 4513 4513 MS2 16/18 Linfeng_20130408_Smad2_8.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 208 3.24 0.00 0 8 50 2 597.79474 1194.58220 6.04 34.72 2905 2905 MS2 17/18 Linfeng_20130405_rIgG7.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 230 3.24 0.00 0 9 50 2 705.86963 1410.73198 6.80 38.36 3915 3915 MS2 20/26 Linfeng_20130408_Smad2_3.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 184 3.22 0.00 0 10 49 2 597.79388 1194.58049 4.61 34.73 3208 3208 MS2 17/18 Linfeng_20130405_rIgG8.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 192 3.20 0.00 0 31 50 2 597.79590 1194.58452 7.99 34.55 2846 2846 MS2 17/18 Linfeng_20130408_Smad2_4.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 189 3.20 0.00 0 2 45 2 597.79352 1194.57976 4.00 34.85 2847 2847 MS2 17/18 Linfeng_20130405_rIgG10.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 209 3.19 0.00 0 27 50 2 597.79523 1194.58318 6.86 34.79 2978 2978 MS2 17/18 Linfeng_20130405_rIgG6.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 190 3.19 0.00 0 22 45 2 649.82227 1298.63725 5.78 39.14 4394 4394 MS2 15/20 Linfeng_20130408_Smad2_8.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 198 3.18 0.00 0 20 50 2 649.82452 1298.64177 9.26 39.29 4083 4083 MS2 16/20 Linfeng_20130408_Smad2_6.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 182 3.18 0.00 0 15 50 2 597.79407 1194.58086 4.92 34.81 3128 3128 MS2 16/18 Linfeng_20130405_rIgG9.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 213 3.17 0.00 0 12 50 2 705.87085 1410.73442 8.53 38.27 3698 3698 MS2 18/26 Linfeng_20130408_Smad2_7.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 192 3.15 0.00 0 9 50 2 649.82214 1298.63701 5.59 39.41 4062 4062 MS2 15/20 Linfeng_20130408_Smad2_2.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 181 3.15 0.00 0 16 50 2 597.79346 1194.57964 3.90 34.77 2913 2913 MS2 17/18 Linfeng_20130405_rIgG1.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 130 3.14 0.00 0 26 30 2 729.33893 1457.67058 3.71 40.55 4850 4850 MS2 18/22 Linfeng_20130405_rIgG2.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 104 3.14 0.00 0 0 16 2 621.78656 1242.56584 1.69 37.43 3733 3733 MS2 14/18 Linfeng_20130405_rIgG1.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 217 3.13 0.00 0 7 50 2 705.86890 1410.73052 5.76 38.53 4136 4136 MS2 18/26 Linfeng_20130405_rIgG6.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 263 3.13 0.00 0 48 11 2 572.31830 1143.62932 3.22 39.89 4988 4988 MS2 16/18 Linfeng_20130405_rIgG8.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 127 3.12 0.00 0 36 22 2 729.33936 1457.67143 4.30 40.61 4855 4855 MS2 16/22 Linfeng_20130405_rIgG3.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 225 3.12 0.00 0 3 29 2 705.86810 1410.72893 4.63 38.48 4159 4159 MS2 19/26 Linfeng_20130405_rIgG2.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 134 3.09 0.00 0 32 37 2 729.34039 1457.67351 5.72 40.64 4744 4744 MS2 17/22 Linfeng_20130405_rIgG1.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 203 3.09 0.00 0 10 50 2 597.79572 1194.58415 7.68 34.67 2835 2835 MS2 17/18 Linfeng_20130408_Smad2_3.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 99 3.09 0.00 0 33 24 2 621.78632 1242.56536 1.30 37.43 4034 4034 MS2 15/18 Linfeng_20130405_rIgG4.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 138 3.08 0.00 0 44 50 2 729.34143 1457.67558 7.14 40.37 4358 4358 MS2 17/22 Linfeng_20130408_Smad2_7.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 105 3.08 0.00 0 7 28 2 621.78656 1242.56584 1.69 37.43 3754 3754 MS2 15/18 Linfeng_20130405_rIgG7.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 199 3.08 0.00 0 32 50 2 649.82404 1298.64079 8.51 39.10 4266 4266 MS2 15/20 Linfeng_20130408_Smad2_9.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 228 3.06 0.00 0 24 50 2 597.79639 1194.58550 8.80 34.58 2683 2683 MS2 16/18 Linfeng_20130408_Smad2_7.raw High VDALmDEINFmK Unambiguous 3 1 P13647 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 140 3.05 0.00 0 26 50 2 729.34167 1457.67607 7.48 40.29 4773 4773 MS2 16/22 Linfeng_20130408_Smad2_8.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 286 3.04 0.00 0 54 35 2 572.31854 1143.62981 3.64 39.92 4848 4848 MS2 16/18 Linfeng_20130405_rIgG4.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 109 3.04 0.00 0 5 19 2 621.78699 1242.56670 2.38 37.42 3828 3828 MS2 15/18 Linfeng_20130405_rIgG3.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 3.04 0.00 0 10 16 2 602.32550 1203.64372 5.70 40.36 4424 4424 MS2 16/18 Linfeng_20130408_Smad2_6.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 97 3.03 0.00 0 0 45 2 621.78589 1242.56450 0.61 37.34 3462 3462 MS2 16/18 Linfeng_20130408_Smad2_7.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 226 3.02 0.00 0 8 50 2 720.36377 1439.72026 5.34 38.57 4158 4158 MS2 19/32 Linfeng_20130405_rIgG3.raw High LAELEEALQK Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 259 3.01 0.00 0 55 28 2 572.31830 1143.62932 3.22 39.94 4857 4857 MS2 16/18 Linfeng_20130405_rIgG9.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 103 3.01 0.00 0 29 50 2 621.78601 1242.56474 0.81 37.13 3634 3634 MS2 15/18 Linfeng_20130408_Smad2_9.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 212 3.01 0.00 0 21 50 2 597.79504 1194.58281 6.55 34.61 3126 3126 MS2 17/18 Linfeng_20130405_rIgG4.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 198 3.00 0.00 0 5 50 2 649.82257 1298.63786 6.25 39.00 3823 3823 MS2 15/20 Linfeng_20130408_Smad2_10.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 96 3.00 0.00 0 0 44 2 621.78552 1242.56377 0.02 37.34 3515 3515 MS2 15/18 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 184 2.99 0.00 0 16 20 2 632.35297 1263.69866 3.38 41.61 5077 5077 MS2 17/20 Linfeng_20130408_Smad2_1.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 348 2.98 0.00 0 9 11 2 602.32538 1203.64348 5.50 40.44 4587 4587 MS2 17/18 Linfeng_20130408_Smad2_3.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.96 0.00 0 10 12 2 602.32544 1203.64360 5.60 40.48 4665 4665 MS2 17/18 Linfeng_20130408_Smad2_1.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 202 2.96 0.00 0 32 50 2 649.82452 1298.64177 9.26 39.26 4013 4013 MS2 15/20 Linfeng_20130408_Smad2_7.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 191 2.95 0.00 0 23 50 2 649.82245 1298.63762 6.06 39.25 4297 4297 MS2 14/20 Linfeng_20130408_Smad2_4.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 196 2.92 0.00 0 45 50 2 597.79565 1194.58403 7.58 34.53 2927 2927 MS2 16/18 Linfeng_20130408_Smad2_5.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 115 2.90 0.00 0 19 50 2 621.78802 1242.56877 4.05 37.25 3690 3690 MS2 14/18 Linfeng_20130408_Smad2_4.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 351 2.89 0.00 0 5 8 2 602.32544 1203.64360 5.60 40.18 4628 4628 MS2 17/18 Linfeng_20130408_Smad2_9.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 353 2.86 0.00 0 15 50 2 602.32599 1203.64470 6.51 40.35 4354 4354 MS2 16/18 Linfeng_20130408_Smad2_7.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 350 2.83 0.00 0 11 12 2 602.32568 1203.64409 6.01 40.19 4740 4740 MS2 17/18 Linfeng_20130408_Smad2_8.raw High TTAENEFVmLK Unambiguous 4 1 P13647 M9(Oxidation) CID 1.0000 0.0000 1 1 184 2.83 0.00 0 40 50 2 649.82098 1298.63469 3.81 39.33 4225 4225 MS2 13/20 Linfeng_20130408_Smad2_3.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 100 2.82 0.00 0 0 31 2 621.78558 1242.56389 0.12 37.35 3721 3721 MS2 15/18 Linfeng_20130408_Smad2_1.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 118 2.82 0.00 0 6 50 2 621.78674 1242.56621 1.99 37.26 3756 3756 MS2 16/18 Linfeng_20130408_Smad2_5.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 130 2.70 0.00 0 36 50 2 621.78943 1242.57158 6.31 37.31 3629 3629 MS2 14/18 Linfeng_20130408_Smad2_3.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 105 2.70 0.00 0 26 50 2 621.78577 1242.56426 0.41 37.08 3258 3258 MS2 15/18 Linfeng_20130408_Smad2_10.raw High SFSTASAITPSVSR Unambiguous 3 1 P13647 CID 1.0000 0.0000 1 1 223 2.70 0.00 0 8 50 2 705.86981 1410.73235 7.06 38.31 4073 4073 MS2 18/26 Linfeng_20130408_Smad2_5.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 347 2.68 0.00 0 10 28 2 602.32599 1203.64470 6.51 40.53 4415 4415 MS2 17/18 Linfeng_20130408_Smad2_2.raw High SLYNLGGSK Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 163 2.67 0.00 0 0 12 2 469.75034 938.49339 -0.86 37.66 3789 3789 MS2 14/16 Linfeng_20130408_Smad2_9.raw High WTLLQEQGTK Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 349 2.66 0.00 0 32 15 2 602.32538 1203.64348 5.50 40.37 4752 4752 MS2 16/18 Linfeng_20130408_Smad2_5.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 116 2.64 0.00 0 34 50 2 621.78711 1242.56694 2.58 37.41 3493 3493 MS2 14/18 Linfeng_20130408_Smad2_2.raw High QNLEPLFEQYINNLR Unambiguous 9 3 P13647;P02538;P04259 CID 1.0000 0.0000 1 1 257 2.64 0.00 0 0 39 2 945.99219 1890.97710 3.28 42.70 5503 5503 MS2 14/28 Linfeng_20130408_Smad2_1.raw High ISISTSGGSFR Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 200 2.63 0.00 0 7 44 2 556.29327 1111.57927 4.51 38.29 3704 3704 MS2 17/20 Linfeng_20130408_Smad2_2.raw High YEELQQTAGR Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 184 2.62 0.00 0 18 50 2 597.79578 1194.58428 7.78 34.76 2704 2704 MS2 15/18 Linfeng_20130408_Smad2_2.raw High TEAESWYQTK Unambiguous 4 1 P13647 CID 1.0000 0.0000 1 1 98 2.61 0.00 0 0 50 2 621.78546 1242.56365 -0.08 37.16 3781 3781 MS2 15/18 Linfeng_20130408_Smad2_8.raw High ISISTSGGSFR Unambiguous 2 1 P13647 CID 1.0000 0.0000 1 1 193 2.61 0.00 0 10 50 2 556.29431 1111.58135 6.37 37.83 3449 3449 MS2 17/20 Linfeng_20130408_Smad2_10.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 2.60 0.00 1 46 50 2 567.29004 1133.57280 9.53 33.82 2484 2484 MS2 14/16 Linfeng_20130408_Smad2_6.raw High NmQDLVEDFK Unambiguous 3 1 P13647 M2(Oxidation) CID 1.0000 0.0000 1 1 122 2.55 0.00 0 59 50 2 627.79150 1254.57573 6.84 39.64 4197 4197 MS2 13/18 Linfeng_20130408_Smad2_6.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw P22626-2 Isoform A2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 - [ROA2_HUMAN] 30.50 2 6 6 9 25.30 26.10 5 6 11.08 14.66 3 3 341 36.0 8.65 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NmGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 2 1 P22626-2 M2(Oxidation) CID 1.0000 0.0000 1 1 17 6.17 0.00 0 0 50 2 1103.46057 2205.91387 6.12 36.17 3339 3339 MS2 31/48 Linfeng_20130405_rIgG7.raw High NmGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 2 1 P22626-2 M2(Oxidation) CID 1.0000 0.0000 1 1 22 5.07 0.00 0 8 50 2 1103.46350 2205.91973 8.77 36.05 3120 3120 MS2 26/48 Linfeng_20130408_Smad2_6.raw High NmGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 2 1 P22626-2 M2(Oxidation) CID 1.0000 0.0000 1 1 18 4.50 0.00 0 3 50 3 735.97583 2205.91294 5.69 36.15 3334 3334 MS2 29/96 Linfeng_20130405_rIgG7.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 21 4.50 0.00 0 3 50 3 832.35504 2495.05057 4.37 39.94 4537 4537 MS2 23/108 Linfeng_20130405_rIgG7.raw High LFIGGLSFETTEESLR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 239 3.64 0.00 0 6 28 2 899.96912 1798.93096 4.84 42.47 5496 5496 MS2 22/30 Linfeng_20130405_rIgG7.raw High IDTIEIITDR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 290 3.29 0.00 0 27 7 2 594.82916 1188.65105 3.32 41.34 5034 5034 MS2 17/18 Linfeng_20130405_rIgG7.raw High IDTIEIITDR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 248 3.21 0.00 0 23 27 2 594.83020 1188.65312 5.07 41.28 4729 4729 MS2 17/18 Linfeng_20130408_Smad2_6.raw High QEMQEVQSSR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 143 3.21 0.00 0 54 50 2 611.28455 1221.56182 7.31 32.81 2408 2408 MS2 17/18 Linfeng_20130405_rIgG7.raw High GGGGNFGPGPGSNFR Unambiguous 2 1 P22626-2 CID 1.0000 0.0000 1 1 109 2.79 0.00 0 9 50 2 689.31958 1377.63188 1.71 37.46 3536 3536 MS2 15/28 Linfeng_20130408_Smad2_6.raw B4DEF7 78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=2 SV=1 - [B4DEF7_HUMAN] 29.86 2 4 6 8 7.35 9.71 2 2 20.06 29.86 6 6 278 30.4 6.05 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IINEPTAAAIAYGLDK Unambiguous 16 2 B4DEF7;E9PLF4 CID 1.0000 0.0000 1 1 210 4.02 0.00 0 11 50 2 830.45697 1659.90666 6.85 41.37 4991 4991 MS2 26/30 Linfeng_20130408_Smad2_4.raw High NQLTSNPENTVFDAK Unambiguous 2 1 B4DEF7 CID 1.0000 0.0000 1 1 248 3.85 0.00 0 7 50 2 839.41248 1677.81767 5.81 38.91 4203 4203 MS2 21/28 Linfeng_20130408_Smad2_9.raw High NQLTSNPENTVFDAK Unambiguous 2 1 B4DEF7 CID 1.0000 0.0000 1 1 203 3.84 0.00 0 0 50 2 839.41162 1677.81597 4.79 39.29 4628 4628 MS2 20/28 Linfeng_20130405_rIgG4.raw High TWNDPSVQQDIK Unambiguous 2 1 B4DEF7 CID 1.0000 0.0000 1 1 238 3.50 0.00 0 19 50 2 715.85284 1430.69841 5.12 38.24 4273 4273 MS2 17/22 Linfeng_20130405_rIgG4.raw High VTHAVVTVPAYFNDAQR Unambiguous 2 1 B4DEF7 CID 1.0000 0.0000 1 1 254 3.47 0.00 0 11 50 3 629.99835 1887.98050 4.91 39.67 4456 4456 MS2 27/64 Linfeng_20130408_Smad2_9.raw High TWNDPSVQQDIK Unambiguous 2 1 B4DEF7 CID 1.0000 0.0000 1 1 224 3.17 0.00 0 27 50 2 715.85596 1430.70464 9.47 37.91 3870 3870 MS2 18/22 Linfeng_20130408_Smad2_9.raw High DAGTIAGLNVmR Unambiguous 2 1 B4DEF7 M11(Oxidation) CID 1.0000 0.0000 1 1 294 2.98 0.00 0 29 50 2 617.32074 1233.63420 6.91 38.80 4165 4165 MS2 15/22 Linfeng_20130408_Smad2_9.raw High VEIIANDQGNR Unambiguous 32 3 P08107;E9PLF4;B4DEF7 CID 1.0000 0.0000 1 2 225 2.57 0.00 0 20 50 2 614.82208 1228.63689 7.15 35.69 3157 3157 MS2 16/20 Linfeng_20130408_Smad2_9.raw P13646 "Keratin, type I cytoskeletal 13 OS=Homo sapiens GN=KRT13 PE=1 SV=4 - [K1C13_HUMAN]" 29.69 5 8 13 69 52.58 7.42 4 15 176.11 29.69 13 54 458 49.6 4.96 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLQGLEIELQSQLSmK Unambiguous 5 2 P13646;P08727 M15(Oxidation) CID 1.0000 0.0000 1 1 236 4.39 0.00 0 8 19 3 611.99554 1833.97208 5.10 42.09 5446 5446 MS2 31/60 Linfeng_20130408_Smad2_8.raw High STSVTTTSSASVTTTSNASGR Unambiguous 1 1 P13646 CID 1.0000 0.0000 1 1 192 4.27 0.00 0 1 50 2 1001.98944 2002.97161 9.58 33.91 2781 2781 MS2 19/40 Linfeng_20130408_Smad2_8.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 227 3.98 0.00 1 16 13 2 690.37061 1379.73393 4.45 38.32 4067 4067 MS2 16/20 Linfeng_20130405_rIgG3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 226 3.85 0.00 0 0 21 2 651.33453 1301.66179 2.60 37.81 4141 4141 MS2 19/22 Linfeng_20130405_rIgG4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 225 3.83 0.00 1 16 50 2 690.37073 1379.73418 4.62 38.02 3904 3904 MS2 17/20 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.82 0.00 0 22 50 2 651.33386 1301.66045 1.56 37.40 3846 3846 MS2 18/22 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.82 0.00 0 0 21 2 651.33350 1301.65972 1.00 37.74 3797 3797 MS2 18/22 Linfeng_20130408_Smad2_1.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 233 3.81 0.00 0 3 50 2 651.33392 1301.66057 1.66 37.77 3573 3573 MS2 18/22 Linfeng_20130408_Smad2_2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 219 3.79 0.00 0 2 9 2 651.33447 1301.66167 2.50 37.81 3848 3848 MS2 18/22 Linfeng_20130405_rIgG7.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.78 0.00 0 13 5 2 651.33362 1301.65996 1.19 37.85 3823 3823 MS2 18/22 Linfeng_20130405_rIgG1.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 222 3.76 0.00 1 14 50 2 690.37231 1379.73735 6.92 38.17 3907 3907 MS2 16/20 Linfeng_20130408_Smad2_1.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 15 14 2 561.79596 1122.58464 5.03 36.83 3546 3546 MS2 15/16 Linfeng_20130408_Smad2_1.raw High LKYENELALR Unambiguous 5 1 P13646 CID 1.0000 0.0000 1 1 207 3.74 0.00 1 5 21 3 416.90558 1248.70218 5.98 37.86 3975 3975 MS2 22/36 Linfeng_20130408_Smad2_8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 247 3.72 0.00 0 6 13 2 651.33429 1301.66130 2.22 37.77 4096 4096 MS2 18/22 Linfeng_20130405_rIgG9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.69 0.00 0 13 4 2 651.33368 1301.66008 1.28 37.81 3921 3921 MS2 18/22 Linfeng_20130405_rIgG3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.67 0.00 0 10 50 2 651.33484 1301.66240 3.07 37.61 3579 3579 MS2 18/22 Linfeng_20130408_Smad2_6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.66 0.00 0 0 50 2 651.33380 1301.66033 1.47 37.44 3717 3717 MS2 17/22 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 248 3.65 0.00 0 0 50 2 651.33429 1301.66130 2.22 37.68 3720 3720 MS2 18/22 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.61 0.00 1 51 50 2 690.37317 1379.73906 8.16 38.00 3898 3898 MS2 16/20 Linfeng_20130408_Smad2_9.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 231 3.61 0.00 0 27 50 2 651.33606 1301.66484 4.94 37.58 3843 3843 MS2 18/22 Linfeng_20130408_Smad2_5.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.60 0.00 0 18 50 2 561.79767 1122.58806 8.07 36.69 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_4.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.58 0.00 0 24 9 2 651.33417 1301.66106 2.03 37.79 4197 4197 MS2 18/22 Linfeng_20130405_rIgG5.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 216 3.56 0.00 0 0 50 2 651.33545 1301.66362 4.00 37.60 3777 3777 MS2 18/22 Linfeng_20130408_Smad2_4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 218 3.54 0.00 1 12 30 2 690.37054 1379.73381 4.36 38.41 3986 3986 MS2 16/20 Linfeng_20130405_rIgG1.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.50 0.00 1 23 50 2 690.37317 1379.73906 8.16 38.06 3991 3991 MS2 16/20 Linfeng_20130408_Smad2_5.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 224 3.50 0.00 0 14 11 2 651.33508 1301.66289 3.44 37.83 3904 3904 MS2 18/22 Linfeng_20130405_rIgG6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 282 3.43 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.44 3089 3089 MS2 15/16 Linfeng_20130408_Smad2_10.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 210 3.42 0.00 1 25 50 2 690.37317 1379.73906 8.16 38.19 3738 3738 MS2 17/20 Linfeng_20130408_Smad2_6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.41 0.00 0 11 50 2 561.79736 1122.58745 7.53 36.77 3457 3457 MS2 15/16 Linfeng_20130408_Smad2_3.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 242 3.39 0.00 0 8 13 2 651.33398 1301.66069 1.75 37.69 4191 4191 MS2 17/22 Linfeng_20130405_rIgG8.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 228 3.39 0.00 0 7 50 2 651.33417 1301.66106 2.03 37.59 3518 3518 MS2 18/22 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.38 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.71 3284 3284 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LKYENELALR Unambiguous 5 1 P13646 CID 1.0000 0.0000 1 1 204 3.36 0.00 1 20 50 2 624.85461 1248.70195 5.80 37.87 3977 3977 MS2 15/18 Linfeng_20130408_Smad2_8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 298 3.34 0.00 0 18 50 2 561.79712 1122.58696 7.09 36.71 3326 3326 MS2 15/16 Linfeng_20130408_Smad2_6.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 232 3.30 0.00 0 15 18 2 651.33344 1301.65959 0.91 37.77 3949 3949 MS2 17/22 Linfeng_20130405_rIgG2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 276 3.29 0.00 0 22 50 2 561.79730 1122.58733 7.42 36.52 3428 3428 MS2 15/16 Linfeng_20130408_Smad2_9.raw High STSVTTTSSASVTTTSNASGR Unambiguous 1 1 P13646 CID 1.0000 0.0000 1 1 185 3.25 0.00 0 0 50 2 1001.98871 2002.97014 8.85 34.30 2578 2578 MS2 19/40 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.24 0.00 0 11 50 2 561.79724 1122.58721 7.31 36.87 3324 3324 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 6 50 2 561.79370 1122.58013 1.00 36.67 3568 3568 MS2 15/16 Linfeng_20130408_Smad2_5.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 239 3.21 0.00 0 8 3 2 601.31458 1201.62187 3.89 38.91 4617 4617 MS2 17/20 Linfeng_20130405_rIgG8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 300 3.16 0.00 0 13 36 2 561.79688 1122.58647 6.66 36.48 3579 3579 MS2 15/16 Linfeng_20130408_Smad2_8.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 221 3.16 0.00 1 15 50 2 690.37244 1379.73760 7.10 38.24 3872 3872 MS2 16/20 Linfeng_20130408_Smad2_3.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 254 3.15 0.00 0 31 45 2 601.31421 1201.62114 3.28 37.86 3593 3593 MS2 18/20 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.14 0.00 0 23 36 2 561.79547 1122.58367 4.16 36.89 3551 3551 MS2 15/16 Linfeng_20130405_rIgG1.raw High mIGFPSSAGSVSPR Unambiguous 1 1 P13646 M1(Oxidation) CID 1.0000 0.0000 1 1 231 3.13 0.00 0 25 50 2 704.85413 1408.70098 8.50 39.00 3933 3933 MS2 19/26 Linfeng_20130408_Smad2_2.raw High EVSTNTAmIQTSK Unambiguous 4 1 P13646 M8(Oxidation) CID 1.0000 0.0000 1 1 197 3.12 0.00 0 17 50 2 713.35394 1425.70061 8.11 34.03 2785 2785 MS2 17/24 Linfeng_20130408_Smad2_5.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.10 0.00 1 20 50 2 690.37097 1379.73467 4.98 38.36 3725 3725 MS2 13/20 Linfeng_20130408_Smad2_2.raw High ALEEANADLEVK Unambiguous 7 3 P13646;P02533;P08779 CID 1.0000 0.0000 1 1 225 3.09 0.00 0 21 37 2 651.33374 1301.66020 1.38 37.83 3721 3721 MS2 17/22 Linfeng_20130405_rIgG10.raw High VILEIDNAR Unambiguous 5 1 P13646 CID 1.0000 0.0000 1 1 245 3.09 0.00 0 23 50 2 521.80121 1042.59514 5.71 39.28 4390 4390 MS2 15/16 Linfeng_20130408_Smad2_5.raw High VILEIDNAR Unambiguous 5 1 P13646 CID 1.0000 0.0000 1 1 212 3.07 0.00 0 2 9 2 521.80048 1042.59368 4.30 39.06 4367 4367 MS2 15/16 Linfeng_20130408_Smad2_8.raw High VLDELTLSK Unambiguous 4 1 P13646 CID 1.0000 0.0000 1 1 178 3.06 0.00 0 47 50 2 509.29907 1017.59087 8.03 39.54 4527 4527 MS2 13/16 Linfeng_20130408_Smad2_8.raw High EVSTNTAmIQTSK Unambiguous 4 1 P13646 M8(Oxidation) CID 1.0000 0.0000 1 1 188 3.04 0.00 0 0 50 2 713.35413 1425.70098 8.37 34.18 2545 2545 MS2 17/24 Linfeng_20130408_Smad2_2.raw High mIGFPSSAGSVSPR Unambiguous 1 1 P13646 M1(Oxidation) CID 1.0000 0.0000 1 1 223 3.02 0.00 0 25 50 2 704.85461 1408.70195 9.19 38.65 4228 4228 MS2 18/26 Linfeng_20130408_Smad2_8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 260 3.01 0.00 0 34 50 2 561.79437 1122.58147 2.20 36.86 3568 3568 MS2 15/16 Linfeng_20130405_rIgG7.raw High VLDELTLSK Unambiguous 4 1 P13646 CID 1.0000 0.0000 1 1 203 3.01 0.00 0 18 50 2 509.29700 1017.58672 3.95 39.75 4545 4545 MS2 13/16 Linfeng_20130408_Smad2_5.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 266 2.93 0.00 0 5 30 2 601.31793 1201.62859 9.48 38.64 4227 4227 MS2 17/20 Linfeng_20130408_Smad2_8.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 257 2.93 0.00 0 27 50 2 601.31689 1201.62651 7.75 38.06 3815 3815 MS2 12/20 Linfeng_20130408_Smad2_3.raw High EVSTNTAmIQTSK Unambiguous 4 1 P13646 M8(Oxidation) CID 1.0000 0.0000 1 1 221 2.89 0.00 0 9 50 2 713.35480 1425.70232 9.31 33.76 2738 2738 MS2 16/24 Linfeng_20130408_Smad2_8.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 245 2.87 0.00 0 7 48 2 601.31708 1201.62688 8.05 38.89 3898 3898 MS2 17/20 Linfeng_20130408_Smad2_2.raw High ILTATIENNR Unambiguous 4 1 P13646 CID 1.0000 0.0000 1 1 275 2.74 0.00 0 11 50 2 572.82324 1144.63921 6.20 37.16 3416 3416 MS2 15/18 Linfeng_20130408_Smad2_2.raw High VILEIDNAR Unambiguous 5 1 P13646 CID 1.0000 0.0000 1 1 226 2.73 0.00 0 49 50 2 521.80176 1042.59624 6.76 38.97 3816 3816 MS2 13/16 Linfeng_20130408_Smad2_10.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 256 2.71 0.00 0 50 50 2 601.31653 1201.62578 7.14 38.48 3656 3656 MS2 17/20 Linfeng_20130408_Smad2_10.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 260 2.67 0.00 0 11 19 2 601.31659 1201.62590 7.24 38.88 4143 4143 MS2 17/20 Linfeng_20130408_Smad2_1.raw High VLDELTLSK Unambiguous 4 1 P13646 CID 1.0000 0.0000 1 1 220 2.66 0.00 0 32 50 2 509.29843 1017.58959 6.77 39.87 4211 4211 MS2 13/16 Linfeng_20130408_Smad2_2.raw High ILTATIENNR Unambiguous 4 1 P13646 CID 1.0000 0.0000 1 1 268 2.65 0.00 0 34 50 2 572.82227 1144.63725 4.49 36.70 3648 3648 MS2 16/18 Linfeng_20130408_Smad2_8.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 241 2.65 0.00 0 43 50 2 601.31726 1201.62724 8.36 38.77 3919 3919 MS2 14/20 Linfeng_20130408_Smad2_6.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 257 2.63 0.00 0 17 50 2 601.31659 1201.62590 7.24 38.76 3853 3853 MS2 15/20 Linfeng_20130408_Smad2_7.raw High YENELALR Unambiguous 9 1 P13646 CID 1.0000 0.0000 1 1 250 2.59 0.00 0 41 50 2 504.26328 1007.51927 3.58 37.77 3944 3944 MS2 13/14 Linfeng_20130408_Smad2_8.raw High QSVEADINGLR Unambiguous 5 2 P13645;P13646 CID 1.0000 0.0000 1 1 258 2.56 0.00 0 19 37 2 601.31635 1201.62541 6.83 38.63 4107 4107 MS2 17/20 Linfeng_20130408_Smad2_9.raw Q5T7D5 Fructose-bisphosphate aldolase OS=Homo sapiens GN=ALDOB PE=2 SV=1 - [Q5T7D5_HUMAN] 28.25 3 4 4 4 14.80 28.25 4 4 223 24.1 7.11 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IADQcPSSLAIQENANALAR Unambiguous 3 1 Q5T7D5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 255 4.52 0.00 0 34 50 3 714.69830 2142.08036 9.09 39.82 4481 4481 MS2 38/76 Linfeng_20130408_Smad2_4.raw High LDQGGAPLAGTNK Unambiguous 3 1 Q5T7D5 CID 1.0000 0.0000 1 1 183 3.90 0.00 0 17 50 2 621.33325 1241.65923 8.63 34.80 2922 2922 MS2 22/24 Linfeng_20130408_Smad2_4.raw High ETTIQGLDGLSER Unambiguous 3 1 Q5T7D5 CID 1.0000 0.0000 1 1 283 3.19 0.00 0 16 50 2 709.86566 1418.72405 8.33 39.95 4524 4524 MS2 19/24 Linfeng_20130408_Smad2_4.raw High KYTPEQVAmATVTALHR Unambiguous 3 1 Q5T7D5 M9(Oxidation) CID 1.0000 0.0000 1 1 258 3.19 0.00 1 27 50 3 644.67700 1932.01645 8.08 40.13 4580 4580 MS2 23/64 Linfeng_20130408_Smad2_4.raw P47929 Galectin-7 OS=Homo sapiens GN=LGALS7 PE=1 SV=2 - [LEG7_HUMAN] 27.21 1 3 3 6 19.87 27.21 3 6 136 15.1 7.62 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LVEVGGDVQLDSVR Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 241 5.09 0.00 0 9 50 2 743.40411 1485.80095 6.81 39.73 4476 4476 MS2 22/26 Linfeng_20130408_Smad2_9.raw High LDTSEVVFNSK Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 221 3.58 0.00 0 33 50 2 619.82001 1238.63274 5.15 38.75 4148 4148 MS2 18/20 Linfeng_20130408_Smad2_9.raw High LDTSEVVFNSK Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 205 3.15 0.00 0 35 50 2 619.82214 1238.63701 8.60 38.86 4299 4299 MS2 16/20 Linfeng_20130408_Smad2_8.raw High LDTSEVVFNSK Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 192 2.78 0.00 0 38 50 2 619.82147 1238.63567 7.51 39.06 4140 4140 MS2 14/20 Linfeng_20130408_Smad2_3.raw High AVVGDAQYHHFR Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 171 2.65 0.00 0 23 50 2 700.35181 1399.69634 6.96 34.89 2900 2900 MS2 16/22 Linfeng_20130408_Smad2_9.raw High LDTSEVVFNSK Unambiguous 1 1 P47929 CID 1.0000 0.0000 1 1 220 2.62 0.00 0 22 50 2 619.82129 1238.63530 7.22 39.04 4004 4004 MS2 14/20 Linfeng_20130408_Smad2_6.raw H0YH81 ATP synthase subunit beta (Fragment) OS=Homo sapiens GN=ATP5B PE=3 SV=1 - [H0YH81_HUMAN] 26.80 4 7 7 8 28.14 26.80 7 8 362 38.2 5.55 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FTQAGSEVSALLGR Unambiguous 2 1 H0YH81 CID 1.0000 0.0000 1 1 237 4.35 0.00 0 7 40 2 718.38458 1435.76189 5.47 41.27 5005 5005 MS2 22/26 Linfeng_20130408_Smad2_9.raw High AIAELGIYPAVDPLDSTSR Unambiguous 3 1 H0YH81 CID 1.0000 0.0000 1 1 163 4.29 0.00 0 8 37 2 994.52539 1988.04350 4.99 42.02 5281 5281 MS2 19/36 Linfeng_20130408_Smad2_9.raw High VLDSGAPIKIPVGPETLGR Unambiguous 4 1 H0YH81 CID 1.0000 0.0000 1 1 53 4.05 0.00 1 3 34 3 640.37402 1919.10752 5.92 40.99 4903 4903 MS2 35/72 Linfeng_20130408_Smad2_9.raw High IMNVIGEPIDER Unambiguous 4 1 H0YH81 CID 1.0000 0.0000 1 1 220 3.99 0.00 0 22 50 2 693.36169 1385.71611 4.84 40.45 4718 4718 MS2 18/22 Linfeng_20130408_Smad2_9.raw High IGLFGGAGVGK Unambiguous 4 1 H0YH81 CID 1.0000 0.0000 1 1 162 3.04 0.00 0 24 50 2 488.28659 975.56590 3.73 40.84 4850 4850 MS2 18/20 Linfeng_20130408_Smad2_9.raw High TIAMDGTEGLVR Unambiguous 4 1 H0YH81 CID 1.0000 0.0000 1 1 275 2.93 0.00 0 14 50 2 631.82751 1262.64775 5.35 39.21 4303 4303 MS2 18/22 Linfeng_20130408_Smad2_9.raw High VVDLLAPYAK Unambiguous 4 1 H0YH81 CID 1.0000 0.0000 1 1 150 2.79 0.00 0 26 45 2 544.82159 1088.63591 0.77 41.38 5045 5045 MS2 13/18 Linfeng_20130408_Smad2_9.raw High ImNVIGEPIDER Unambiguous 4 1 H0YH81 M2(Oxidation) CID 1.0000 0.0000 1 1 221 2.69 0.00 0 52 50 2 701.35974 1401.71221 5.62 38.76 4152 4152 MS2 16/22 Linfeng_20130408_Smad2_9.raw Q04695 "Keratin, type I cytoskeletal 17 OS=Homo sapiens GN=KRT17 PE=1 SV=2 - [K1C17_HUMAN]" 25.69 4 5 10 78 104.40 17.59 7 29 169.47 25.69 10 49 432 48.1 5.02 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 Q04695 M11(Oxidation) CID 1.0000 0.0000 1 1 181 4.73 0.00 0 0 50 2 1065.51575 2130.02422 5.12 39.99 4640 4640 MS2 24/40 Linfeng_20130405_rIgG3.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 Q04695 M11(Oxidation) CID 1.0000 0.0000 1 1 185 4.52 0.00 0 0 50 2 1065.51697 2130.02666 6.27 39.72 4473 4473 MS2 21/40 Linfeng_20130408_Smad2_9.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 Q04695 M11(Oxidation) CID 1.0000 0.0000 1 1 180 4.30 0.00 0 0 50 2 1065.51819 2130.02910 7.41 39.95 4494 4494 MS2 23/40 Linfeng_20130408_Smad2_1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 293 4.17 0.00 0 2 50 2 681.35449 1361.70171 8.04 35.06 2833 2833 MS2 20/24 Linfeng_20130408_Smad2_6.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 288 4.16 0.00 0 3 47 2 681.35358 1361.69988 6.69 34.90 2902 2902 MS2 20/24 Linfeng_20130408_Smad2_9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 296 4.09 0.00 0 8 50 2 681.35419 1361.70110 7.59 34.89 3080 3080 MS2 19/24 Linfeng_20130408_Smad2_8.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 268 4.05 0.00 0 5 50 2 681.35138 1361.69548 3.47 35.25 3277 3277 MS2 20/24 Linfeng_20130405_rIgG9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 314 4.03 0.00 0 10 50 2 681.35394 1361.70061 7.23 35.04 3084 3084 MS2 20/24 Linfeng_20130408_Smad2_5.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 227 3.98 0.00 1 16 13 2 690.37061 1379.73393 4.45 38.32 4067 4067 MS2 16/20 Linfeng_20130405_rIgG3.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 314 3.93 0.00 0 8 48 2 681.35223 1361.69719 4.72 35.19 3365 3365 MS2 20/24 Linfeng_20130405_rIgG8.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 277 3.88 0.00 0 2 50 2 681.35327 1361.69927 6.25 35.23 3120 3120 MS2 20/24 Linfeng_20130405_rIgG3.raw High LLEGEDAHLTQYK Unambiguous 3 1 Q04695 CID 1.0000 0.0000 1 1 244 3.87 0.00 0 0 50 2 758.88831 1516.76933 3.35 37.36 3695 3695 MS2 19/24 Linfeng_20130408_Smad2_9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 280 3.87 0.00 0 14 50 2 681.35376 1361.70024 6.96 35.19 3040 3040 MS2 20/24 Linfeng_20130408_Smad2_1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 292 3.86 0.00 0 11 50 2 681.35345 1361.69963 6.51 35.23 2849 2849 MS2 17/24 Linfeng_20130408_Smad2_2.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 270 3.83 0.00 0 16 50 2 681.35333 1361.69939 6.34 35.20 3182 3182 MS2 17/24 Linfeng_20130405_rIgG2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 246 3.83 0.00 0 4 14 2 515.30298 1029.59868 4.60 40.73 5134 5134 MS2 15/16 Linfeng_20130405_rIgG4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 294 3.83 0.00 0 12 50 2 681.35400 1361.70073 7.32 35.02 2993 2993 MS2 18/24 Linfeng_20130408_Smad2_4.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 225 3.83 0.00 1 16 50 2 690.37073 1379.73418 4.62 38.02 3904 3904 MS2 17/20 Linfeng_20130408_Smad2_9.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 200 3.82 0.00 0 5 50 2 702.34674 1403.68620 7.14 36.99 3585 3585 MS2 19/24 Linfeng_20130408_Smad2_9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 239 3.79 0.00 0 4 37 2 515.30493 1029.60259 8.40 40.53 4805 4805 MS2 15/16 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.79 0.00 0 16 13 2 515.30298 1029.59868 4.60 40.67 4893 4893 MS2 15/16 Linfeng_20130405_rIgG2.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 292 3.78 0.00 0 13 50 2 681.35211 1361.69695 4.54 35.27 2983 2983 MS2 17/24 Linfeng_20130405_rIgG10.raw High ALEEANTELEVK Unambiguous 1 1 Q04695 CID 1.0000 0.0000 1 1 243 3.77 0.00 0 32 15 2 673.34821 1345.68913 3.35 37.56 3757 3757 MS2 18/22 Linfeng_20130408_Smad2_9.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 222 3.76 0.00 1 14 50 2 690.37231 1379.73735 6.92 38.17 3907 3907 MS2 16/20 Linfeng_20130408_Smad2_1.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 15 14 2 561.79596 1122.58464 5.03 36.83 3546 3546 MS2 15/16 Linfeng_20130408_Smad2_1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.75 0.00 0 13 15 2 515.30280 1029.59831 4.25 40.67 4877 4877 MS2 15/16 Linfeng_20130405_rIgG6.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 192 3.72 0.00 0 0 50 2 702.34625 1403.68523 6.45 37.20 3670 3670 MS2 19/24 Linfeng_20130408_Smad2_1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.72 0.00 0 11 22 2 515.30261 1029.59795 3.89 40.73 5147 5147 MS2 15/16 Linfeng_20130405_rIgG9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 32 32 2 681.35132 1361.69536 3.38 35.24 3405 3405 MS2 17/24 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 4 7 2 515.30365 1029.60002 5.91 40.33 4680 4680 MS2 15/16 Linfeng_20130408_Smad2_9.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 287 3.63 0.00 0 26 50 2 681.35284 1361.69841 5.62 35.24 3059 3059 MS2 19/24 Linfeng_20130405_rIgG1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 272 3.61 0.00 0 15 50 2 681.35370 1361.70012 6.87 35.13 2976 2976 MS2 17/24 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.61 0.00 1 51 50 2 690.37317 1379.73906 8.16 38.00 3898 3898 MS2 16/20 Linfeng_20130408_Smad2_9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.61 0.00 0 0 8 2 515.30255 1029.59783 3.77 40.68 4785 4785 MS2 15/16 Linfeng_20130405_rIgG7.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 182 3.60 0.00 0 13 50 2 702.34570 1403.68413 5.66 37.26 3769 3769 MS2 19/24 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.60 0.00 0 7 13 2 515.30273 1029.59819 4.13 40.74 4683 4683 MS2 15/16 Linfeng_20130405_rIgG10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.60 0.00 0 18 50 2 561.79767 1122.58806 8.07 36.69 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 333 3.59 0.00 0 27 50 2 681.35254 1361.69780 5.17 35.15 3300 3300 MS2 18/24 Linfeng_20130405_rIgG4.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.58 0.00 0 2 18 2 515.30341 1029.59953 5.43 40.55 4483 4483 MS2 15/16 Linfeng_20130408_Smad2_6.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 286 3.58 0.00 0 14 50 2 681.35352 1361.69975 6.60 35.23 3114 3114 MS2 17/24 Linfeng_20130405_rIgG6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 245 3.58 0.00 0 7 8 2 515.30249 1029.59770 3.65 40.67 4875 4875 MS2 15/16 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 237 3.56 0.00 0 2 30 2 515.30493 1029.60259 8.40 40.55 4622 4622 MS2 15/16 Linfeng_20130408_Smad2_3.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 218 3.54 0.00 1 12 30 2 690.37054 1379.73381 4.36 38.41 3986 3986 MS2 16/20 Linfeng_20130405_rIgG1.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 270 3.54 0.00 0 12 50 2 681.35321 1361.69914 6.16 35.21 3061 3061 MS2 19/24 Linfeng_20130405_rIgG7.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.50 0.00 1 23 50 2 690.37317 1379.73906 8.16 38.06 3991 3991 MS2 16/20 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 261 3.46 0.00 0 4 15 2 515.30316 1029.59905 4.96 40.50 4401 4401 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 282 3.43 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.44 3089 3089 MS2 15/16 Linfeng_20130408_Smad2_10.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 210 3.42 0.00 1 25 50 2 690.37317 1379.73906 8.16 38.19 3738 3738 MS2 17/20 Linfeng_20130408_Smad2_6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.41 0.00 0 11 50 2 561.79736 1122.58745 7.53 36.77 3457 3457 MS2 15/16 Linfeng_20130408_Smad2_3.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.38 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.71 3284 3284 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 298 3.34 0.00 0 18 50 2 561.79712 1122.58696 7.09 36.71 3326 3326 MS2 15/16 Linfeng_20130408_Smad2_6.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 198 3.31 0.00 0 11 50 2 702.34778 1403.68828 8.62 37.17 3583 3583 MS2 17/24 Linfeng_20130408_Smad2_3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 244 3.30 0.00 0 14 9 2 515.30273 1029.59819 4.13 40.66 5282 5282 MS2 15/16 Linfeng_20130405_rIgG8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 276 3.29 0.00 0 22 50 2 561.79730 1122.58733 7.42 36.52 3428 3428 MS2 15/16 Linfeng_20130408_Smad2_9.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 210 3.25 0.00 0 0 50 2 702.34509 1403.68291 4.79 37.29 3680 3680 MS2 18/24 Linfeng_20130405_rIgG1.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.24 0.00 0 11 50 2 561.79724 1122.58721 7.31 36.87 3324 3324 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 6 50 2 561.79370 1122.58013 1.00 36.67 3568 3568 MS2 15/16 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 141 3.17 0.00 1 22 36 2 532.81140 1064.61553 5.27 37.27 3822 3822 MS2 13/16 Linfeng_20130405_rIgG2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 300 3.16 0.00 0 13 36 2 561.79688 1122.58647 6.66 36.48 3579 3579 MS2 15/16 Linfeng_20130408_Smad2_8.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 221 3.16 0.00 1 15 50 2 690.37244 1379.73760 7.10 38.24 3872 3872 MS2 16/20 Linfeng_20130408_Smad2_3.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.14 0.00 0 23 36 2 561.79547 1122.58367 4.16 36.89 3551 3551 MS2 15/16 Linfeng_20130405_rIgG1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 238 3.13 0.00 0 1 50 2 515.30469 1029.60210 7.92 40.69 4469 4469 MS2 15/16 Linfeng_20130408_Smad2_2.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 265 3.13 0.00 0 17 50 2 681.35345 1361.69963 6.51 35.01 2810 2810 MS2 18/24 Linfeng_20130408_Smad2_7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 236 3.13 0.00 0 61 21 2 515.30255 1029.59783 3.77 40.67 5265 5265 MS2 15/16 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 229 3.11 0.00 0 8 37 2 515.30304 1029.59880 4.72 40.70 4768 4768 MS2 15/16 Linfeng_20130405_rIgG1.raw High TRLEQEIATYR Unambiguous 10 4 P13646;P02533;P08779;Q04695 CID 1.0000 0.0000 1 1 214 3.10 0.00 1 20 50 2 690.37097 1379.73467 4.98 38.36 3725 3725 MS2 13/20 Linfeng_20130408_Smad2_2.raw High TIVEEVQDGK Unambiguous 2 1 Q04695 CID 1.0000 0.0000 1 1 302 3.09 0.00 0 26 48 2 559.29388 1117.58049 6.17 36.56 3442 3442 MS2 16/18 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 142 3.03 0.00 1 5 27 2 532.81165 1064.61601 5.73 37.34 3759 3759 MS2 14/16 Linfeng_20130405_rIgG6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 260 3.01 0.00 0 34 50 2 561.79437 1122.58147 2.20 36.86 3568 3568 MS2 15/16 Linfeng_20130405_rIgG7.raw High ASLEGNLAETENR Unambiguous 4 1 Q04695 CID 1.0000 0.0000 1 1 222 2.93 0.00 0 12 50 2 702.34729 1403.68730 7.92 37.27 3452 3452 MS2 15/24 Linfeng_20130408_Smad2_2.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.91 0.00 1 3 50 2 532.81317 1064.61907 8.60 37.08 3442 3442 MS2 13/16 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 127 2.89 0.00 1 11 50 2 532.81213 1064.61699 6.65 37.08 3697 3697 MS2 14/16 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 145 2.86 0.00 1 28 50 2 532.81305 1064.61882 8.37 37.11 3642 3642 MS2 13/16 Linfeng_20130408_Smad2_4.raw High EVATNSELVQSGK Unambiguous 5 2 P02533;Q04695 CID 1.0000 0.0000 1 1 291 2.76 0.00 0 18 50 2 681.35364 1361.70000 6.78 34.74 2624 2624 MS2 13/24 Linfeng_20130408_Smad2_10.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 139 2.72 0.00 1 31 50 2 532.81219 1064.61711 6.76 37.17 3659 3659 MS2 13/16 Linfeng_20130408_Smad2_1.raw High TIVEEVQDGK Unambiguous 2 1 Q04695 CID 1.0000 0.0000 1 1 310 2.63 0.00 0 35 50 2 559.29315 1117.57903 4.85 35.47 3085 3085 MS2 15/18 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 140 2.58 0.00 1 22 50 2 532.81219 1064.61711 6.76 36.95 3571 3571 MS2 14/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.58 0.00 1 18 50 2 532.81287 1064.61846 8.03 37.29 3458 3458 MS2 14/16 Linfeng_20130408_Smad2_2.raw G3V576 Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Homo sapiens GN=HNRNPC PE=4 SV=1 - [G3V576_HUMAN] 25.54 20 5 5 10 18.42 12.12 2 4 23.53 25.54 5 6 231 25.2 9.82 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High mIAGQVLDINLAAEPK Unambiguous 15 1 G3V576 M1(Oxidation) CID 1.0000 0.0000 1 1 216 5.68 0.00 0 5 8 2 849.96173 1698.91619 3.88 41.40 4771 4771 MS2 24/30 Linfeng_20130408_Smad2_6.raw High mIAGQVLDINLAAEPK Unambiguous 15 1 G3V576 M1(Oxidation) CID 1.0000 0.0000 1 1 205 5.18 0.00 0 16 13 2 849.96252 1698.91777 4.82 41.52 5106 5106 MS2 24/30 Linfeng_20130405_rIgG7.raw High MIAGQVLDINLAAEPK Unambiguous 15 1 G3V576 CID 1.0000 0.0000 1 1 175 4.96 0.00 0 14 10 3 561.64551 1682.92197 4.34 41.86 5246 5246 MS2 37/60 Linfeng_20130405_rIgG7.raw High mIAGQVLDINLAAEPK Unambiguous 15 1 G3V576 M1(Oxidation) CID 1.0000 0.0000 1 1 232 4.58 0.00 0 9 13 3 566.97760 1698.91825 5.10 41.52 5108 5108 MS2 32/60 Linfeng_20130405_rIgG7.raw High mIAGQVLDINLAAEPK Unambiguous 15 1 G3V576 M1(Oxidation) CID 1.0000 0.0000 1 1 247 4.47 0.00 0 2 13 3 566.97699 1698.91642 4.02 41.41 4773 4773 MS2 34/60 Linfeng_20130408_Smad2_6.raw High VFIGNLNTLVVK Unambiguous 20 1 G3V576 CID 1.0000 0.0000 1 1 51 3.79 0.00 0 8 6 2 658.90332 1316.79936 4.29 41.76 4900 4900 MS2 19/22 Linfeng_20130408_Smad2_6.raw High VFIGNLNTLVVK Unambiguous 20 1 G3V576 CID 1.0000 0.0000 1 1 53 3.69 0.00 0 10 5 2 658.90350 1316.79973 4.57 41.85 5243 5243 MS2 19/22 Linfeng_20130405_rIgG7.raw High KSDVEAIFSK Unambiguous 19 1 G3V576 CID 1.0000 0.0000 1 1 184 3.32 0.00 1 46 50 2 562.30725 1123.60723 6.95 38.42 3814 3814 MS2 13/18 Linfeng_20130408_Smad2_6.raw High GFAFVQYVNER Unambiguous 16 1 G3V576 CID 1.0000 0.0000 1 1 217 3.21 0.00 0 20 32 2 665.33551 1329.66374 3.82 41.49 4806 4806 MS2 17/20 Linfeng_20130408_Smad2_6.raw High VDSLLENLEK Unambiguous 11 1 G3V576 CID 1.0000 0.0000 1 1 294 3.06 0.00 0 14 32 2 580.31647 1159.62566 4.40 41.32 4744 4744 MS2 16/18 Linfeng_20130408_Smad2_6.raw F5H8K9 "Keratin, type II cytoskeletal 4 OS=Homo sapiens GN=KRT4 PE=3 SV=1 - [F5H8K9_HUMAN]" 25.00 3 6 11 38 0.00 126.98 25.00 11 38 500 53.9 5.92 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 150 4.28 0.00 0 14 17 2 639.36432 1277.72136 8.87 41.96 5117 5117 MS2 18/20 Linfeng_20130408_Smad2_3.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 147 4.28 0.00 0 48 20 2 639.36133 1277.71538 4.19 41.84 5215 5215 MS2 18/20 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVR Unambiguous 6 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 252 4.24 0.00 0 20 7 2 679.37238 1357.73747 3.85 42.47 5593 5593 MS2 19/22 Linfeng_20130408_Smad2_8.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 144 4.20 0.00 0 16 3 2 639.36102 1277.71477 3.71 41.89 4952 4952 MS2 18/20 Linfeng_20130408_Smad2_6.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 143 4.19 0.00 0 40 5 2 639.36121 1277.71514 3.99 41.89 5184 5184 MS2 18/20 Linfeng_20130408_Smad2_4.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 135 4.08 0.00 0 19 10 2 639.36212 1277.71697 5.43 41.98 4912 4912 MS2 18/20 Linfeng_20130408_Smad2_2.raw High SKAEAEALYQTK Unambiguous 10 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 256 4.00 0.00 1 0 50 2 669.85321 1338.69914 6.81 34.39 2923 2923 MS2 18/22 Linfeng_20130408_Smad2_8.raw High WNLLQQQTTTTSSK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 248 3.89 0.00 0 11 50 2 818.42755 1635.84783 8.62 40.08 4702 4702 MS2 19/26 Linfeng_20130408_Smad2_8.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 149 3.89 0.00 0 29 7 2 639.36072 1277.71416 3.23 42.00 5225 5225 MS2 18/20 Linfeng_20130408_Smad2_1.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 135 3.85 0.00 0 20 3 2 639.36127 1277.71526 4.09 41.75 4743 4743 MS2 18/20 Linfeng_20130408_Smad2_10.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 147 3.84 0.00 0 43 7 2 639.36188 1277.71648 5.05 41.92 4889 4889 MS2 18/20 Linfeng_20130408_Smad2_7.raw High WNLLQQQTTTTSSK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 272 3.78 0.00 0 4 50 2 818.42725 1635.84722 8.25 40.43 4383 4383 MS2 17/26 Linfeng_20130408_Smad2_2.raw High NLEPLFETYLSVLR Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 175 3.46 0.00 0 4 50 2 847.46533 1693.92339 4.35 43.13 5845 5845 MS2 20/26 Linfeng_20130408_Smad2_8.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 231 3.35 0.00 0 39 50 2 562.28851 1123.56975 5.99 35.89 3021 3021 MS2 15/18 Linfeng_20130408_Smad2_2.raw High VDSLNDEINFLK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 258 3.28 0.00 0 26 14 2 703.86523 1406.72319 4.93 41.74 5305 5305 MS2 19/22 Linfeng_20130408_Smad2_8.raw High VQQLQISVDQHGDNLK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 274 3.26 0.00 0 12 45 3 607.98938 1821.95359 4.48 37.75 3940 3940 MS2 29/60 Linfeng_20130408_Smad2_8.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 241 3.23 0.00 0 47 50 2 562.28894 1123.57060 6.75 35.76 3035 3035 MS2 15/18 Linfeng_20130408_Smad2_6.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 3.21 0.00 0 83 50 2 562.28802 1123.56877 5.12 35.67 3268 3268 MS2 15/18 Linfeng_20130408_Smad2_5.raw High SKAEAEALYQTK Unambiguous 10 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 232 3.18 0.00 1 19 50 3 446.90393 1338.69724 5.39 34.43 2936 2936 MS2 23/44 Linfeng_20130408_Smad2_8.raw High TAAENDFVVLK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 245 3.17 0.00 0 30 50 2 603.82642 1206.64556 7.47 40.29 4341 4341 MS2 16/20 Linfeng_20130408_Smad2_2.raw High TAAENDFVVLK Unambiguous 3 1 F5H8K9 CID 1.0000 0.0000 1 1 267 3.12 0.00 0 29 50 2 603.82709 1206.64690 8.58 39.95 4660 4660 MS2 14/20 Linfeng_20130408_Smad2_8.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 225 3.11 0.00 0 44 50 2 562.28754 1123.56780 4.25 35.74 2990 2990 MS2 15/18 Linfeng_20130408_Smad2_7.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.09 0.00 0 25 50 2 554.27972 1107.55217 8.32 35.15 2860 2860 MS2 15/16 Linfeng_20130408_Smad2_6.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 215 3.09 0.00 0 53 50 2 562.28821 1123.56914 5.45 35.44 2799 2799 MS2 15/18 Linfeng_20130408_Smad2_10.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 3.05 0.00 0 11 50 2 554.27979 1107.55229 8.44 35.11 3020 3020 MS2 15/16 Linfeng_20130408_Smad2_4.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 211 3.00 0.00 0 27 50 2 554.27936 1107.55144 7.66 35.31 2870 2870 MS2 15/16 Linfeng_20130408_Smad2_2.raw High GAFSSVSmSGGAGR Unambiguous 3 1 F5H8K9 M8(Oxidation) CID 1.0000 0.0000 1 1 88 2.98 0.00 0 43 50 2 643.79706 1286.58684 5.74 35.32 3169 3169 MS2 19/26 Linfeng_20130408_Smad2_5.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 221 2.98 0.00 0 25 50 2 562.28833 1123.56938 5.66 35.79 3154 3154 MS2 15/18 Linfeng_20130408_Smad2_3.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 198 2.97 0.00 0 11 26 2 554.27838 1107.54949 5.90 34.98 3107 3107 MS2 14/16 Linfeng_20130408_Smad2_8.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 202 2.94 0.00 0 7 50 2 554.27856 1107.54985 6.23 35.01 2939 2939 MS2 15/16 Linfeng_20130408_Smad2_9.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 224 2.90 0.00 0 44 50 2 562.28882 1123.57036 6.53 35.71 3199 3199 MS2 15/18 Linfeng_20130408_Smad2_4.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 254 2.87 0.00 0 25 50 2 562.28717 1123.56706 3.60 35.92 3248 3248 MS2 15/18 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 210 2.79 0.00 0 27 50 2 554.27930 1107.55132 7.55 35.14 2840 2840 MS2 15/16 Linfeng_20130408_Smad2_7.raw High GAFSSVSmSGGAGR Unambiguous 3 1 F5H8K9 M8(Oxidation) CID 1.0000 0.0000 1 1 85 2.77 0.00 0 37 50 2 643.79749 1286.58769 6.40 35.46 2910 2910 MS2 16/26 Linfeng_20130408_Smad2_2.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 2.71 0.00 0 56 50 2 562.28815 1123.56902 5.34 35.48 3253 3253 MS2 15/18 Linfeng_20130408_Smad2_8.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 235 2.68 0.00 0 23 50 2 554.27667 1107.54607 2.81 35.10 3104 3104 MS2 14/16 Linfeng_20130408_Smad2_5.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 222 2.64 0.00 0 69 50 2 554.28033 1107.55339 9.43 35.24 3052 3052 MS2 14/16 Linfeng_20130408_Smad2_1.raw High AQYEEIAQR Unambiguous 11 4 P35908;F5H8K9;P02538;P04259 CID 1.0000 0.0000 1 1 199 2.64 0.00 0 18 50 2 554.27930 1107.55132 7.55 34.85 2654 2654 MS2 15/16 Linfeng_20130408_Smad2_10.raw Q8IUE6 Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3 - [H2A2B_HUMAN] 24.62 3 1 2 5 14.41 24.62 2 5 130 14.0 10.89 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 279 3.09 0.00 0 11 34 2 472.77234 944.53740 6.48 39.88 4527 4527 MS2 14/16 Linfeng_20130408_Smad2_9.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 286 3.08 0.00 0 41 50 2 472.77213 944.53697 6.03 40.13 4282 4282 MS2 13/16 Linfeng_20130408_Smad2_7.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 286 2.97 0.00 0 57 50 2 472.77295 944.53862 7.77 39.70 4039 4039 MS2 13/16 Linfeng_20130408_Smad2_10.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 277 2.68 0.00 0 43 50 2 472.77216 944.53703 6.09 39.87 4636 4636 MS2 13/16 Linfeng_20130408_Smad2_8.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 Q8IUE6 CID 1.0000 0.0000 1 1 3 2.59 0.00 0 0 50 2 1136.19922 2271.39116 4.92 42.76 5113 5113 MS2 12/44 Linfeng_20130408_Smad2_10.raw P29508-2 Isoform 2 of Serpin B3 OS=Homo sapiens GN=SERPINB3 - [SPB3_HUMAN] 24.56 5 7 7 10 35.18 24.56 7 10 338 38.5 6.74 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FYQTSVESVDFANAPEESR Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 119 5.53 0.00 0 12 50 2 1088.50232 2175.99736 6.60 40.32 4678 4678 MS2 23/36 Linfeng_20130408_Smad2_9.raw High VLHFDQVTENTTGK Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 217 4.39 0.00 0 0 50 2 794.90295 1588.79863 1.27 37.77 3823 3823 MS2 19/26 Linfeng_20130408_Smad2_9.raw High FYQTSVESVDFANAPEESR Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 137 3.99 0.00 0 15 50 3 726.00385 2175.99698 6.43 40.32 4677 4677 MS2 29/72 Linfeng_20130408_Smad2_9.raw High INSWVESQTNEK Unambiguous 5 1 P29508-2 CID 1.0000 0.0000 1 1 199 3.89 0.00 0 5 50 2 717.85211 1434.69695 7.63 36.98 3584 3584 MS2 19/22 Linfeng_20130408_Smad2_9.raw High LmEWTSLQNMR Unambiguous 5 1 P29508-2 M2(Oxidation) CID 1.0000 0.0000 1 1 190 3.38 0.00 0 26 50 2 712.84204 1424.67681 7.47 40.58 4763 4763 MS2 17/20 Linfeng_20130408_Smad2_9.raw High VLHFDQVTENTTGK Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 252 3.18 0.00 0 10 27 3 530.27118 1588.79898 1.49 37.69 3798 3798 MS2 24/52 Linfeng_20130408_Smad2_9.raw High LmEWTSLQNmR Unambiguous 5 1 P29508-2 M2(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 159 2.82 0.00 0 9 50 2 720.83936 1440.67143 7.19 38.79 4162 4162 MS2 17/20 Linfeng_20130408_Smad2_9.raw High TNSILFYGR Unambiguous 5 1 P29508-2 CID 1.0000 0.0000 1 1 174 2.75 0.00 0 12 30 2 535.78876 1070.57024 6.81 40.57 4759 4759 MS2 14/16 Linfeng_20130408_Smad2_9.raw High GLVLSGVLHK Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 48 2.71 0.00 0 51 50 2 511.82452 1022.64177 5.90 39.59 4429 4429 MS2 14/18 Linfeng_20130408_Smad2_9.raw High DNTAQQIK Unambiguous 2 1 P29508-2 CID 1.0000 0.0000 1 1 290 2.53 0.00 0 16 50 2 459.24026 917.47325 4.94 30.30 1808 1808 MS2 12/14 Linfeng_20130408_Smad2_9.raw P05109 Protein S100-A8 OS=Homo sapiens GN=S100A8 PE=1 SV=1 - [S10A8_HUMAN] 23.66 1 2 2 8 6.29 23.66 2 2 18.35 23.66 2 6 93 10.8 7.03 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLETEcPQYIR Unambiguous 1 1 P05109 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.52 0.00 0 6 50 2 711.36481 1421.72234 9.12 38.60 4099 4099 MS2 18/20 Linfeng_20130408_Smad2_9.raw High ALNSIIDVYHK Unambiguous 1 1 P05109 CID 1.0000 0.0000 1 1 273 3.48 0.00 0 10 50 2 636.85437 1272.70146 5.31 39.78 4494 4494 MS2 16/20 Linfeng_20130408_Smad2_9.raw High LLETEcPQYIR Unambiguous 1 1 P05109 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 254 3.25 0.00 0 13 44 2 711.36072 1421.71416 3.36 39.04 4104 4104 MS2 17/20 Linfeng_20130405_rIgG10.raw High LLETEcPQYIR Unambiguous 1 1 P05109 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 247 3.20 0.00 0 14 50 2 711.36389 1421.72051 7.83 38.48 3657 3657 MS2 17/20 Linfeng_20130408_Smad2_10.raw High ALNSIIDVYHK Unambiguous 1 1 P05109 CID 1.0000 0.0000 1 1 271 3.04 0.00 0 16 50 2 636.85333 1272.69939 3.68 40.23 4506 4506 MS2 15/20 Linfeng_20130405_rIgG10.raw High LLETEcPQYIR Unambiguous 1 1 P05109 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 258 2.85 0.00 0 24 50 2 711.36407 1421.72087 8.09 38.94 3915 3915 MS2 16/20 Linfeng_20130408_Smad2_2.raw High ALNSIIDVYHK Unambiguous 1 1 P05109 CID 1.0000 0.0000 1 1 248 2.70 0.00 0 27 50 2 636.85559 1272.70391 7.23 39.67 4029 4029 MS2 14/20 Linfeng_20130408_Smad2_10.raw High ALNSIIDVYHK Unambiguous 1 1 P05109 CID 1.0000 0.0000 1 1 233 2.60 0.00 0 34 50 2 636.85565 1272.70403 7.33 39.78 4604 4604 MS2 13/20 Linfeng_20130408_Smad2_8.raw E5RJD2 "2,4-dienoyl-CoA reductase, mitochondrial (Fragment) OS=Homo sapiens GN=DECR1 PE=4 SV=1 - [E5RJD2_HUMAN]" 23.18 5 2 2 3 10.26 23.18 2 3 151 15.9 8.85 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VAGHPNIVINNAAGNFISPTER Unambiguous 5 1 E5RJD2 CID 1.0000 0.0000 1 1 178 3.71 0.00 0 11 50 3 764.40759 2291.20823 8.30 40.07 4563 4563 MS2 28/84 Linfeng_20130408_Smad2_4.raw High ATAEQISSQTGNK Unambiguous 5 1 E5RJD2 CID 1.0000 0.0000 1 1 249 3.36 0.00 0 26 50 2 667.83746 1334.66765 9.70 32.71 2330 2330 MS2 19/24 Linfeng_20130408_Smad2_4.raw High VAGHPNIVINNAAGNFISPTER Unambiguous 5 1 E5RJD2 CID 1.0000 0.0000 1 1 177 3.19 0.00 0 35 50 3 764.40814 2291.20987 9.02 39.97 4559 4559 MS2 22/84 Linfeng_20130408_Smad2_9.raw E5RI71 Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=4 SV=1 - [E5RI71_HUMAN] 22.81 2 2 2 2 5.44 22.81 2 2 114 11.8 8.76 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AAYQVAALPK Unambiguous 2 1 E5RI71 CID 1.0000 0.0000 1 1 201 2.78 0.00 0 76 50 2 516.30133 1031.59538 6.72 37.94 3876 3876 MS2 13/18 Linfeng_20130408_Smad2_4.raw High APGAIGPYSQAVLVDR Unambiguous 2 1 E5RI71 CID 1.0000 0.0000 1 1 205 2.66 0.00 0 37 50 2 807.44226 1613.87724 7.80 40.46 4688 4688 MS2 18/30 Linfeng_20130408_Smad2_4.raw P81605 Dermcidin OS=Homo sapiens GN=DCD PE=1 SV=2 - [DCD_HUMAN] 22.73 2 2 2 3 0.00 8.49 22.73 2 3 110 11.3 6.54 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LGKDAVEDLESVGK Unambiguous 2 1 P81605 CID 1.0000 0.0000 1 1 277 3.31 0.00 1 42 50 3 487.26227 1459.77225 5.69 39.39 4428 4428 MS2 27/52 Linfeng_20130408_Smad2_5.raw High ENAGEDPGLAR Unambiguous 2 1 P81605 CID 1.0000 0.0000 1 1 129 2.63 0.00 0 29 50 2 564.77209 1128.53691 7.84 33.58 2317 2317 MS2 14/20 Linfeng_20130408_Smad2_10.raw High ENAGEDPGLAR Unambiguous 2 1 P81605 CID 1.0000 0.0000 1 1 129 2.56 0.00 0 55 50 2 564.77277 1128.53826 9.03 33.85 2491 2491 MS2 16/20 Linfeng_20130408_Smad2_6.raw E9PPU1 40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=4 SV=1 - [E9PPU1_HUMAN] 22.15 11 3 3 3 7.98 22.15 3 3 158 17.4 9.50 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELAEDGYSGVEVR Unambiguous 11 1 E9PPU1 CID 1.0000 0.0000 1 1 176 2.85 0.00 0 18 50 2 712.34491 1423.68254 8.79 37.88 3857 3857 MS2 16/24 Linfeng_20130408_Smad2_9.raw High DEILPTTPISEQK Unambiguous 4 1 E9PPU1 CID 1.0000 0.0000 1 1 259 2.56 0.00 0 27 50 2 735.89209 1470.77690 5.59 39.71 4472 4472 MS2 14/24 Linfeng_20130408_Smad2_9.raw High AELNEFLTR Unambiguous 11 1 E9PPU1 CID 1.0000 0.0000 1 1 276 2.56 0.00 0 18 50 2 546.79175 1092.57622 7.11 40.62 4776 4776 MS2 12/16 Linfeng_20130408_Smad2_9.raw B4DRT4 Hippocampal cholinergic neurostimulating peptide OS=Homo sapiens GN=PEBP1 PE=2 SV=1 - [B4DRT4_HUMAN] 21.94 2 2 2 2 9.85 21.94 2 2 155 17.3 6.00 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GNDISSGTVLSDYVGSGPPK Unambiguous 2 1 B4DRT4 CID 1.0000 0.0000 1 1 213 5.58 0.00 0 0 50 2 975.48328 1949.95928 7.24 40.80 4796 4796 MS2 26/38 Linfeng_20130408_Smad2_4.raw High LYTLVLTDPDAPSR Unambiguous 2 1 B4DRT4 CID 1.0000 0.0000 1 1 254 4.26 0.00 0 13 22 2 780.91974 1560.83220 3.42 41.54 5057 5057 MS2 21/26 Linfeng_20130408_Smad2_4.raw Q96KK5 Histone H2A type 1-H OS=Homo sapiens GN=HIST1H2AH PE=1 SV=3 - [H2A1H_HUMAN] 21.88 10 1 2 10 0.00 39.04 21.88 2 10 128 13.9 10.89 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 6 5.20 0.00 0 2 13 2 966.09222 1931.17717 4.28 42.35 4967 4967 MS2 23/36 Linfeng_20130408_Smad2_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 6 4.72 0.00 0 2 35 2 966.09235 1931.17742 4.40 42.44 5434 5434 MS2 21/36 Linfeng_20130408_Smad2_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 7 4.69 0.00 0 8 7 3 644.39709 1931.17673 4.05 42.35 4966 4966 MS2 31/72 Linfeng_20130408_Smad2_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 7 4.29 0.00 0 21 12 3 644.39655 1931.17508 3.20 42.48 5600 5600 MS2 28/72 Linfeng_20130408_Smad2_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 6 4.18 0.00 0 16 23 2 966.09222 1931.17717 4.28 42.46 5590 5590 MS2 24/36 Linfeng_20130408_Smad2_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 10 1 Q96KK5 CID 1.0000 0.0000 1 1 7 4.14 0.00 0 3 4 3 644.39740 1931.17765 4.52 42.47 5444 5444 MS2 33/72 Linfeng_20130408_Smad2_9.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 279 3.09 0.00 0 11 34 2 472.77234 944.53740 6.48 39.88 4527 4527 MS2 14/16 Linfeng_20130408_Smad2_9.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 286 3.08 0.00 0 41 50 2 472.77213 944.53697 6.03 40.13 4282 4282 MS2 13/16 Linfeng_20130408_Smad2_7.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 286 2.97 0.00 0 57 50 2 472.77295 944.53862 7.77 39.70 4039 4039 MS2 13/16 Linfeng_20130408_Smad2_10.raw High AGLQFPVGR Unambiguous 13 2 Q8IUE6;Q96KK5 CID 1.0000 0.0000 1 1 277 2.68 0.00 0 43 50 2 472.77216 944.53703 6.09 39.87 4636 4636 MS2 13/16 Linfeng_20130408_Smad2_8.raw P09651-3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 - [ROA1_HUMAN] 21.72 12 4 4 6 15.10 16.48 3 4 6.31 11.99 2 2 267 29.4 9.14 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LFIGGLSFETTDESLR Unambiguous 11 1 P09651-3 CID 1.0000 0.0000 1 1 233 4.92 0.00 0 9 17 2 892.96155 1784.91582 5.17 42.44 5485 5485 MS2 23/30 Linfeng_20130405_rIgG7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 7 1 P09651-3 CID 1.0000 0.0000 1 1 30 3.69 0.00 0 0 50 2 847.85980 1694.71233 7.19 32.89 2425 2425 MS2 19/34 Linfeng_20130405_rIgG7.raw High SSGPYGGGGQYFAK Unambiguous 7 1 P09651-3 CID 1.0000 0.0000 1 1 104 3.50 0.00 0 35 50 2 688.31958 1375.63188 3.00 37.45 3480 3480 MS2 15/26 Linfeng_20130408_Smad2_7.raw High IEVIEIMTDR Unambiguous 12 1 P09651-3 CID 1.0000 0.0000 1 1 280 3.47 0.00 0 6 7 2 609.82642 1218.64556 4.62 41.85 5244 5244 MS2 17/18 Linfeng_20130405_rIgG7.raw High IEVIEImTDR Unambiguous 12 1 P09651-3 M7(Oxidation) CID 1.0000 0.0000 1 1 295 3.02 0.00 0 26 12 2 617.82343 1234.63957 3.84 40.07 4576 4576 MS2 16/18 Linfeng_20130405_rIgG7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 7 1 P09651-3 CID 1.0000 0.0000 1 1 32 2.80 0.00 0 6 50 2 847.86096 1694.71465 8.56 32.78 2284 2284 MS2 15/34 Linfeng_20130408_Smad2_9.raw P04083 Annexin A1 OS=Homo sapiens GN=ANXA1 PE=1 SV=2 - [ANXA1_HUMAN] 21.68 3 5 5 7 26.02 21.68 5 7 346 38.7 7.02 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEDFGVNEDLADSDAR Unambiguous 1 1 P04083 CID 1.0000 0.0000 1 1 33 5.30 0.00 0 10 50 2 870.37689 1739.74651 6.29 39.18 4295 4295 MS2 25/30 Linfeng_20130408_Smad2_9.raw High SEDFGVNEDLADSDAR Unambiguous 1 1 P04083 CID 1.0000 0.0000 1 1 45 4.26 0.00 0 10 50 2 870.37939 1739.75151 9.16 39.23 4426 4426 MS2 23/30 Linfeng_20130408_Smad2_8.raw High GVDEATIIDILTK Unambiguous 3 1 P04083 CID 1.0000 0.0000 1 1 219 4.20 0.00 0 53 30 2 694.39081 1387.77434 4.60 42.62 5500 5500 MS2 20/24 Linfeng_20130408_Smad2_9.raw High GGPGSAVSPYPTFNPSSDVAALHK Unambiguous 3 1 P04083 CID 1.0000 0.0000 1 1 282 3.73 0.00 0 7 43 3 786.06256 2356.17313 6.89 40.30 4670 4670 MS2 31/92 Linfeng_20130408_Smad2_9.raw High TPAQFDADELR Unambiguous 2 1 P04083 CID 1.0000 0.0000 1 1 225 3.14 0.00 0 8 50 2 631.80865 1262.61003 6.98 38.44 4043 4043 MS2 18/20 Linfeng_20130408_Smad2_9.raw High TPAQFDADELR Unambiguous 2 1 P04083 CID 1.0000 0.0000 1 1 209 2.77 0.00 0 43 50 2 631.80737 1262.60747 4.95 38.44 4160 4160 MS2 15/20 Linfeng_20130408_Smad2_8.raw High DITSDTSGDFR Unambiguous 2 1 P04083 CID 1.0000 0.0000 1 1 67 2.62 0.00 0 0 50 2 607.27087 1213.53447 1.05 37.42 3712 3712 MS2 17/20 Linfeng_20130408_Smad2_9.raw D6RF44 Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Homo sapiens GN=HNRNPD PE=4 SV=1 - [D6RF44_HUMAN] 21.43 10 1 2 2 0.00 5.93 21.43 2 2 112 12.6 8.57 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFVGGLSPDTPEEK Unambiguous 10 1 D6RF44 CID 1.0000 0.0000 1 1 262 3.14 0.00 0 38 50 2 744.89001 1488.77275 9.82 40.05 4325 4325 MS2 18/26 Linfeng_20130408_Smad2_6.raw High FGEVVDcTLK Unambiguous 13 2 O14979-3;D6RF44 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 186 2.79 0.00 0 10 50 2 584.29413 1167.58098 8.12 38.70 3903 3903 MS2 14/18 Linfeng_20130408_Smad2_6.raw F8W0A9 "Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=3 SV=1 - [F8W0A9_HUMAN]" 20.95 5 6 6 7 23.61 20.95 6 7 377 40.8 6.25 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VAEQTPLTALYVANLIK Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 66 4.32 0.00 0 0 50 2 922.53619 1844.06511 6.65 42.62 5453 5453 MS2 23/32 Linfeng_20130408_Smad2_4.raw High TEQGPQVDETQFK Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 181 3.55 0.00 0 6 50 2 753.86407 1506.72087 9.11 36.58 3472 3472 MS2 19/24 Linfeng_20130408_Smad2_4.raw High LGPALATGNVVVMK Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 109 3.52 0.00 0 32 50 2 685.40149 1369.79570 6.15 40.56 4719 4719 MS2 16/26 Linfeng_20130408_Smad2_4.raw High LGPALATGNVVVmK Unambiguous 4 1 F8W0A9 M13(Oxidation) CID 1.0000 0.0000 1 1 121 3.35 0.00 0 32 50 2 693.40070 1385.79411 8.61 39.03 4225 4225 MS2 18/26 Linfeng_20130408_Smad2_4.raw High VIQVAAGSSNLK Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 197 3.29 0.00 0 48 50 2 593.84674 1186.68620 6.01 36.29 3352 3352 MS2 18/22 Linfeng_20130408_Smad2_9.raw High VAFTGSTEIGR Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 233 3.03 0.00 0 2 41 2 569.29938 1137.59148 1.37 37.76 3826 3826 MS2 18/20 Linfeng_20130408_Smad2_4.raw High EEIFGPVMQILK Unambiguous 4 1 F8W0A9 CID 1.0000 0.0000 1 1 271 2.55 0.00 0 39 50 2 702.38672 1403.76616 4.12 42.64 5461 5461 MS2 17/22 Linfeng_20130408_Smad2_4.raw P07355 Annexin A2 OS=Homo sapiens GN=ANXA2 PE=1 SV=2 - [ANXA2_HUMAN] 20.65 22 7 7 7 19.59 20.65 7 7 339 38.6 7.75 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TNQELQEINR Unambiguous 15 1 P07355 CID 1.0000 0.0000 1 1 259 3.13 0.00 0 20 50 2 622.81934 1244.63140 6.74 35.44 3076 3076 MS2 14/18 Linfeng_20130408_Smad2_9.raw High SLYYYIQQDTK Unambiguous 3 1 P07355 CID 1.0000 0.0000 1 1 260 3.13 0.00 0 45 50 2 711.35449 1421.70171 4.91 40.42 4710 4710 MS2 15/20 Linfeng_20130408_Smad2_9.raw High TPAQYDASELK Unambiguous 15 1 P07355 CID 1.0000 0.0000 1 1 246 2.84 0.00 0 42 50 2 611.80560 1222.60393 7.26 35.88 3218 3218 MS2 15/20 Linfeng_20130408_Smad2_9.raw High QDIAFAYQR Unambiguous 15 1 P07355 CID 1.0000 0.0000 1 1 177 2.80 0.00 0 44 50 2 556.28455 1111.56182 7.82 38.68 4127 4127 MS2 13/16 Linfeng_20130408_Smad2_9.raw High DIISDTSGDFR Unambiguous 14 1 P07355 CID 1.0000 0.0000 1 1 124 2.57 0.00 0 16 50 2 613.29138 1225.57549 4.82 40.23 4646 4646 MS2 16/20 Linfeng_20130408_Smad2_9.raw High DALNIETAIK Unambiguous 15 1 P07355 CID 1.0000 0.0000 1 1 328 2.56 0.00 0 11 22 2 544.30585 1087.60442 4.59 40.37 4693 4693 MS2 15/18 Linfeng_20130408_Smad2_9.raw High WISIMTER Unambiguous 11 1 P07355 CID 1.0000 0.0000 1 1 251 2.55 0.00 0 10 26 2 518.27002 1035.53276 3.41 41.21 4980 4980 MS2 12/14 Linfeng_20130408_Smad2_9.raw O60814 Histone H2B type 1-K OS=Homo sapiens GN=HIST1H2BK PE=1 SV=3 - [H2B1K_HUMAN] 19.84 11 2 2 4 0.00 16.36 19.84 2 4 126 13.9 10.32 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AmGImNSFVNDIFER Unambiguous 11 1 O60814 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 119 4.67 0.00 0 3 9 2 888.41248 1775.81767 4.76 41.89 4796 4796 MS2 22/28 Linfeng_20130408_Smad2_10.raw High AmGIMNSFVNDIFER Unambiguous 11 1 O60814 M2(Oxidation) CID 1.0000 0.0000 1 1 125 4.60 0.00 0 0 50 2 880.41461 1759.82195 4.34 42.50 5022 5022 MS2 24/28 Linfeng_20130408_Smad2_10.raw High AmGIMNSFVNDIFER Unambiguous 11 1 O60814 M2(Oxidation) CID 1.0000 0.0000 1 1 130 4.33 0.00 0 3 29 2 880.41504 1759.82280 4.83 42.59 5487 5487 MS2 24/28 Linfeng_20130408_Smad2_9.raw High KESYSVYVYK Unambiguous 11 1 O60814 CID 1.0000 0.0000 1 1 233 2.76 0.00 1 3 50 2 633.32892 1265.65056 7.36 36.47 3100 3100 MS2 14/18 Linfeng_20130408_Smad2_10.raw E7EUT4 Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=3 SV=1 - [E7EUT4_HUMAN] 19.45 4 4 4 9 31.09 19.45 4 9 293 31.5 7.61 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LVINGNPITIFQER Unambiguous 2 1 E7EUT4 CID 1.0000 0.0000 1 1 159 4.60 0.00 0 13 24 2 807.45959 1613.91191 6.74 42.05 5292 5292 MS2 21/26 Linfeng_20130408_Smad2_9.raw High LISWYDNEFGYSNR Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 156 4.02 0.00 0 11 15 2 882.40900 1763.81072 4.70 41.77 5188 5188 MS2 20/26 Linfeng_20130408_Smad2_9.raw High GALQNIIPASTGAAK Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 141 3.58 0.00 0 15 41 2 706.40369 1411.80010 6.85 39.84 4515 4515 MS2 20/28 Linfeng_20130408_Smad2_9.raw High GALQNIIPASTGAAK Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 144 3.51 0.00 0 19 50 2 706.40454 1411.80181 8.06 40.08 4333 4333 MS2 19/28 Linfeng_20130408_Smad2_6.raw High VPTANVSVVDLTcR Unambiguous 4 1 E7EUT4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 3.36 0.00 0 31 50 3 510.93985 1530.80500 6.84 40.17 4624 4624 MS2 26/52 Linfeng_20130408_Smad2_9.raw High GALQNIIPASTGAAK Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 161 3.31 0.00 0 31 50 2 706.40533 1411.80339 9.18 40.08 4265 4265 MS2 18/28 Linfeng_20130408_Smad2_7.raw High GALQNIIPASTGAAK Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 148 3.09 0.00 0 30 50 2 706.40460 1411.80193 8.14 40.13 4486 4486 MS2 17/28 Linfeng_20130408_Smad2_3.raw High GALQNIIPASTGAAK Unambiguous 4 1 E7EUT4 CID 1.0000 0.0000 1 1 155 2.90 0.00 0 37 50 2 706.40552 1411.80376 9.44 40.01 4541 4541 MS2 16/28 Linfeng_20130408_Smad2_4.raw High VPTANVSVVDLTcR Unambiguous 4 1 E7EUT4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 2.72 0.00 0 28 50 2 765.90692 1530.80657 7.87 40.12 4609 4609 MS2 17/26 Linfeng_20130408_Smad2_9.raw P35268 60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2 - [RL22_HUMAN] 18.75 1 2 2 4 0.00 12.93 18.75 2 4 128 14.8 9.19 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGNLGGGVVTIER Unambiguous 1 1 P35268 CID 1.0000 0.0000 1 1 231 3.48 0.00 0 31 50 2 621.84894 1242.69060 8.41 38.08 3530 3530 MS2 17/24 Linfeng_20130408_Smad2_10.raw High ITVTSEVPFSK Unambiguous 1 1 P35268 CID 1.0000 0.0000 1 1 220 3.17 0.00 0 43 50 2 604.33594 1207.66460 6.35 39.54 4414 4414 MS2 16/20 Linfeng_20130408_Smad2_9.raw High ITVTSEVPFSK Unambiguous 1 1 P35268 CID 1.0000 0.0000 1 1 215 3.17 0.00 0 40 50 2 604.33569 1207.66411 5.94 39.41 3950 3950 MS2 16/20 Linfeng_20130408_Smad2_10.raw High AGNLGGGVVTIER Unambiguous 1 1 P35268 CID 1.0000 0.0000 1 1 214 3.11 0.00 0 13 50 2 621.84833 1242.68938 7.43 38.25 3981 3981 MS2 17/24 Linfeng_20130408_Smad2_9.raw P07737 Profilin-1 OS=Homo sapiens GN=PFN1 PE=1 SV=2 - [PROF1_HUMAN] 18.57 1 2 2 2 5.45 18.57 2 2 140 15.0 8.27 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High STGGAPTFNVTVTK Unambiguous 1 1 P07737 CID 1.0000 0.0000 1 1 203 2.90 0.00 0 33 50 2 690.36755 1379.72783 8.15 38.57 4076 4076 MS2 16/26 Linfeng_20130408_Smad2_4.raw High DSPSVWAAVPGK Unambiguous 1 1 P07737 CID 1.0000 0.0000 1 1 192 2.55 0.00 0 40 50 2 607.31940 1213.63152 8.48 40.28 4628 4628 MS2 16/22 Linfeng_20130408_Smad2_4.raw Q5T8M8 "Actin, alpha 1, skeletal muscle OS=Homo sapiens GN=ACTA1 PE=2 SV=1 - [Q5T8M8_HUMAN]" 18.47 17 1 4 8 23.67 18.47 4 8 287 32.0 5.41 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SYELPDGQVITIGNER Unambiguous 18 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 250 3.36 0.00 0 0 50 2 895.95392 1790.90056 4.78 40.88 4865 4865 MS2 20/30 Linfeng_20130408_Smad2_9.raw High YPIEHGIITNWDDmEK Unambiguous 12 1 Q5T8M8 M14(Oxidation) CID 1.0000 0.0000 1 1 160 3.35 0.00 0 13 50 3 659.64478 1976.91977 7.00 39.62 4439 4439 MS2 23/60 Linfeng_20130408_Smad2_9.raw High SYELPDGQVITIGNER Unambiguous 18 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 211 3.33 0.00 0 16 19 2 895.95337 1790.89946 4.17 41.47 5030 5030 MS2 20/30 Linfeng_20130408_Smad2_4.raw High EITALAPSTMK Unambiguous 17 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 240 2.85 0.00 0 32 50 2 581.31793 1161.62859 8.73 38.59 4084 4084 MS2 12/20 Linfeng_20130408_Smad2_4.raw High AGFAGDDAPR Unambiguous 23 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 123 2.85 0.00 0 12 50 2 488.73105 976.45482 6.63 34.62 2812 2812 MS2 16/18 Linfeng_20130408_Smad2_9.raw High EITALAPSTMK Unambiguous 17 2 Q5T8M8;B4DW52 CID 1.0000 0.0000 1 1 254 2.73 0.00 0 29 50 2 581.31781 1161.62834 8.52 38.37 4021 4021 MS2 16/20 Linfeng_20130408_Smad2_9.raw High EITALAPSTmK Unambiguous 17 2 Q5T8M8;B4DW52 M10(Oxidation) CID 1.0000 0.0000 1 1 294 2.60 0.00 0 32 50 2 589.31445 1177.62163 7.02 36.88 3570 3570 MS2 15/20 Linfeng_20130408_Smad2_4.raw High EITALAPSTmK Unambiguous 17 2 Q5T8M8;B4DW52 M10(Oxidation) CID 1.0000 0.0000 1 1 264 2.59 0.00 0 16 50 2 589.31458 1177.62187 7.22 36.64 3467 3467 MS2 17/20 Linfeng_20130408_Smad2_9.raw H3BPS8 Fructose-bisphosphate aldolase A (Fragment) OS=Homo sapiens GN=ALDOA PE=4 SV=1 - [H3BPS8_HUMAN] 17.27 7 4 4 4 13.38 17.27 4 4 278 30.4 7.52 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IGEHTPSALAImENANVLAR Unambiguous 4 1 H3BPS8 M12(Oxidation) CID 1.0000 0.0000 1 1 254 3.62 0.00 0 50 3 708.37305 2123.10459 6.18 39.83 4512 4512 MS2 30/76 Linfeng_20130408_Smad2_9.raw High RLQSIGTENTEENR Unambiguous 7 1 H3BPS8 CID 1.0000 0.0000 1 1 276 3.56 0.00 1 36 50 3 549.61176 1646.82071 6.92 33.84 2562 2562 MS2 17/52 Linfeng_20130408_Smad2_9.raw High GILAADESTGSIAK Unambiguous 5 1 H3BPS8 CID 1.0000 0.0000 1 1 294 3.40 0.00 0 14 50 2 666.85876 1332.71025 7.23 37.86 3853 3853 MS2 20/26 Linfeng_20130408_Smad2_9.raw High LQSIGTENTEENR Unambiguous 7 1 H3BPS8 CID 1.0000 0.0000 1 1 193 2.80 0.00 0 11 50 2 745.86377 1490.72026 8.09 34.64 2819 2819 MS2 17/24 Linfeng_20130408_Smad2_9.raw C9J4N6 Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Homo sapiens GN=IDH1 PE=3 SV=1 - [C9J4N6_HUMAN] 17.20 2 2 2 2 5.60 17.20 2 2 157 17.7 8.38 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISGGSVVEmQGDEMTR Unambiguous 2 1 C9J4N6 M9(Oxidation) CID 1.0000 0.0000 1 1 98 2.89 0.00 0 43 50 2 856.39276 1711.77825 9.10 36.79 3540 3540 MS2 13/30 Linfeng_20130408_Smad2_4.raw High ATDFVVPGPGK Unambiguous 2 1 C9J4N6 CID 1.0000 0.0000 1 1 284 2.70 0.00 0 37 50 2 544.29730 1087.58733 8.30 38.66 4106 4106 MS2 15/20 Linfeng_20130408_Smad2_4.raw P02545 Prelamin-A/C OS=Homo sapiens GN=LMNA PE=1 SV=1 - [LMNA_HUMAN] 16.87 10 9 9 18 17.64 10.09 5 5 40.30 14.91 8 13 664 74.1 7.02 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SVGGSGGGSFGDNLVTR Unambiguous 4 1 P02545 CID 1.0000 0.0000 1 1 209 4.22 0.00 0 15 45 2 783.88306 1566.75884 5.15 38.92 4502 4502 MS2 20/32 Linfeng_20130405_rIgG4.raw High LADALQELR Unambiguous 10 1 P02545 CID 1.0000 0.0000 1 1 228 3.67 0.00 0 6 49 2 514.79272 1028.57817 4.50 39.77 4491 4491 MS2 15/16 Linfeng_20130408_Smad2_9.raw High TVLcGTcGQPADK Unambiguous 5 1 P02545 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 123 3.51 0.00 0 0 50 2 703.82867 1406.65007 6.93 34.62 3130 3130 MS2 18/24 Linfeng_20130405_rIgG4.raw High SVGGSGGGSFGDNLVTR Unambiguous 4 1 P02545 CID 1.0000 0.0000 1 1 198 3.44 0.00 0 10 50 2 783.88672 1566.76616 9.83 38.70 4120 4120 MS2 17/32 Linfeng_20130408_Smad2_4.raw High SGAQASSTPLSPTR Unambiguous 6 1 P02545 CID 1.0000 0.0000 1 1 251 3.42 0.00 0 6 50 2 680.35229 1359.69731 8.07 34.57 2797 2797 MS2 17/26 Linfeng_20130408_Smad2_9.raw High TALINSTGEEVAMR Unambiguous 7 1 P02545 CID 1.0000 0.0000 1 1 267 3.40 0.00 0 23 50 2 746.38104 1491.75481 5.07 39.02 4536 4536 MS2 20/26 Linfeng_20130405_rIgG4.raw High SVGGSGGGSFGDNLVTR Unambiguous 4 1 P02545 CID 1.0000 0.0000 1 1 219 3.40 0.00 0 7 50 2 783.88666 1566.76604 9.75 38.61 4101 4101 MS2 16/32 Linfeng_20130408_Smad2_9.raw High SGAQASSTPLSPTR Unambiguous 6 1 P02545 CID 1.0000 0.0000 1 1 231 3.36 0.00 0 17 50 2 680.35071 1359.69414 5.74 34.78 3183 3183 MS2 18/26 Linfeng_20130405_rIgG4.raw High IDSLSAQLSQLQK Unambiguous 9 1 P02545 CID 1.0000 0.0000 1 1 214 3.33 0.00 0 35 50 2 715.89905 1430.79082 4.07 40.79 4835 4835 MS2 18/24 Linfeng_20130408_Smad2_9.raw High TALINSTGEEVAMR Unambiguous 7 1 P02545 CID 1.0000 0.0000 1 1 266 3.23 0.00 0 17 50 2 746.38318 1491.75908 7.93 38.66 4118 4118 MS2 17/26 Linfeng_20130408_Smad2_9.raw High LADALQELR Unambiguous 10 1 P02545 CID 1.0000 0.0000 1 1 223 3.15 0.00 0 16 20 2 514.79242 1028.57756 3.91 40.19 4938 4938 MS2 15/16 Linfeng_20130405_rIgG4.raw High SGAQASSTPLSPTR Unambiguous 6 1 P02545 CID 1.0000 0.0000 1 1 268 3.07 0.00 0 6 50 2 680.35297 1359.69866 9.06 34.73 2902 2902 MS2 16/26 Linfeng_20130408_Smad2_4.raw High LADALQELR Unambiguous 10 1 P02545 CID 1.0000 0.0000 1 1 247 3.00 0.00 0 23 50 2 514.79382 1028.58037 6.64 39.93 4515 4515 MS2 15/16 Linfeng_20130408_Smad2_4.raw High ITESEEVVSR Unambiguous 6 1 P02545 CID 1.0000 0.0000 1 1 272 2.85 0.00 0 22 50 2 574.79767 1148.58806 7.53 34.52 2778 2778 MS2 17/18 Linfeng_20130408_Smad2_9.raw High AAYEAELGDAR Unambiguous 6 1 P02545 CID 1.0000 0.0000 1 1 199 2.81 0.00 0 57 50 2 583.28241 1165.55754 7.80 36.75 3529 3529 MS2 16/20 Linfeng_20130408_Smad2_4.raw High TALINSTGEEVAMR Unambiguous 7 1 P02545 CID 1.0000 0.0000 1 1 256 2.80 0.00 0 31 50 2 746.38336 1491.75945 8.18 38.83 4161 4161 MS2 13/26 Linfeng_20130408_Smad2_4.raw High EAALSTALSEK Unambiguous 10 1 P02545 CID 1.0000 0.0000 1 1 289 2.66 0.00 0 30 50 2 560.29810 1119.58891 -0.30 37.63 3782 3782 MS2 16/20 Linfeng_20130408_Smad2_9.raw High EAALSTALSEK Unambiguous 10 1 P02545 CID 1.0000 0.0000 1 1 283 2.61 0.00 0 10 50 2 560.29938 1119.59148 1.99 37.74 3821 3821 MS2 12/20 Linfeng_20130408_Smad2_4.raw P31327 "Carbamoyl-phosphate synthase [ammonia], mitochondrial OS=Homo sapiens GN=CPS1 PE=1 SV=2 - [CPSM_HUMAN]" 16.87 5 18 18 24 94.24 16.87 18 24 1500 164.8 6.74 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TVLMNPNIASVQTNEVGLK Unambiguous 4 1 P31327 CID 1.0000 0.0000 1 1 156 5.83 0.00 0 1 50 2 1014.55280 2028.09831 9.28 40.99 4859 4859 MS2 24/36 Linfeng_20130408_Smad2_4.raw High TVLmNPNIASVQTNEVGLK Unambiguous 4 1 P31327 M4(Oxidation) CID 1.0000 0.0000 1 1 212 5.82 0.00 0 13 50 2 1022.54968 2044.09209 8.65 40.05 4556 4556 MS2 23/36 Linfeng_20130408_Smad2_4.raw High EPLFGISTGNLITGLAAGAK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 99 5.24 0.00 0 2 14 2 965.54224 1930.07720 6.57 42.59 5442 5442 MS2 24/38 Linfeng_20130408_Smad2_4.raw High IAPSFAVESIEDALK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 198 4.92 0.00 0 0 28 2 795.42786 1589.84844 3.92 42.50 5410 5410 MS2 22/28 Linfeng_20130408_Smad2_4.raw High TAVDSGIPLLTNFQVTK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 156 4.83 0.00 0 38 24 3 602.00299 1803.99442 5.13 42.28 5329 5329 MS2 32/64 Linfeng_20130408_Smad2_4.raw High TAVDSGIPLLTNFQVTK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 138 4.70 0.00 0 5 24 2 902.50116 1803.99504 5.47 42.24 5313 5313 MS2 23/32 Linfeng_20130408_Smad2_4.raw High TVVVNcNPETVSTDFDEcDK Unambiguous 3 1 P31327 C6(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 61 4.34 0.00 0 0 50 2 1165.01294 2329.01860 9.72 39.51 4381 4381 MS2 20/38 Linfeng_20130408_Smad2_4.raw High EPLFGISTGNLITGLAAGAK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 105 4.29 0.00 0 3 14 3 644.03064 1930.07737 6.66 42.60 5444 5444 MS2 32/76 Linfeng_20130408_Smad2_4.raw High AIDDNmSLDEIEK Unambiguous 3 1 P31327 M6(Oxidation) CID 1.0000 0.0000 1 1 117 4.04 0.00 0 3 50 2 754.84979 1508.69231 9.11 38.32 3998 3998 MS2 19/24 Linfeng_20130408_Smad2_4.raw High KEPLFGISTGNLITGLAAGAK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 79 3.92 0.00 1 16 29 3 686.72900 2058.17246 6.31 42.03 5238 5238 MS2 27/80 Linfeng_20130408_Smad2_4.raw High IEFEGQPVDFVDPNK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 211 3.83 0.00 0 3 16 2 867.42645 1733.84563 4.30 41.45 5020 5020 MS2 21/28 Linfeng_20130408_Smad2_4.raw High AIDDNMSLDEIEK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 147 3.75 0.00 0 55 50 2 746.85205 1492.69682 8.83 40.19 4600 4600 MS2 18/24 Linfeng_20130408_Smad2_4.raw High GLNSESMTEETLK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 141 3.70 0.00 0 7 30 2 719.84155 1438.67583 1.92 37.84 3846 3846 MS2 18/24 Linfeng_20130408_Smad2_4.raw High AQTAHIVLEDGTK Unambiguous 4 1 P31327 CID 1.0000 0.0000 1 1 210 3.53 0.00 0 24 50 2 691.87317 1382.73906 8.37 35.90 3259 3259 MS2 17/24 Linfeng_20130408_Smad2_4.raw High QADTVYFLPITPQFVTEVIK Unambiguous 4 1 P31327 CID 1.0000 0.0000 1 1 127 3.51 0.00 0 0 50 3 770.42352 2309.25602 5.70 43.08 5611 5611 MS2 36/76 Linfeng_20130408_Smad2_4.raw High GLNSESmTEETLK Unambiguous 3 1 P31327 M7(Oxidation) CID 1.0000 0.0000 1 1 144 3.47 0.00 0 2 50 2 727.84320 1454.67912 7.66 35.35 3097 3097 MS2 18/24 Linfeng_20130408_Smad2_4.raw High GQNQPVLNITNK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 187 3.45 0.00 0 13 50 2 663.36511 1325.72295 4.30 37.47 3740 3740 MS2 17/22 Linfeng_20130408_Smad2_4.raw High HLPTLDHPIIPADYVAIK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 100 3.33 0.00 0 13 50 3 671.71588 2013.13309 8.07 41.23 4942 4942 MS2 24/68 Linfeng_20130408_Smad2_4.raw High AVNTLNEALEFAK Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 246 3.19 0.00 0 48 29 2 710.38086 1419.75444 4.61 41.42 5009 5009 MS2 15/24 Linfeng_20130408_Smad2_4.raw High LYFEELSLER Unambiguous 3 1 P31327 CID 1.0000 0.0000 1 1 198 3.18 0.00 0 7 12 2 649.83838 1298.66948 5.19 41.85 5170 5170 MS2 16/18 Linfeng_20130408_Smad2_4.raw High VLGTSVESImATEDR Unambiguous 3 1 P31327 M10(Oxidation) CID 1.0000 0.0000 1 1 230 3.17 0.00 0 17 50 2 812.40631 1623.80535 9.75 38.69 4116 4116 MS2 19/28 Linfeng_20130408_Smad2_4.raw High QADTVYFLPITPQFVTEVIK Unambiguous 4 1 P31327 CID 1.0000 0.0000 1 1 82 3.01 0.00 0 0 50 2 1155.13135 2309.25542 5.44 43.09 5613 5613 MS2 15/38 Linfeng_20130408_Smad2_4.raw High VmIGENVDEK Unambiguous 3 1 P31327 M2(Oxidation) CID 1.0000 0.0000 1 1 195 2.59 0.00 0 19 50 2 575.27893 1149.55058 4.26 35.41 3117 3117 MS2 15/18 Linfeng_20130408_Smad2_4.raw High DYNHWLATK Unambiguous 4 1 P31327 CID 1.0000 0.0000 1 1 200 2.58 0.00 0 34 50 2 574.28467 1147.56206 7.80 38.58 4081 4081 MS2 12/16 Linfeng_20130408_Smad2_4.raw P08727 "Keratin, type I cytoskeletal 19 OS=Homo sapiens GN=KRT19 PE=1 SV=4 - [K1C19_HUMAN]" 16.25 2 1 6 39 50.84 9.50 4 15 78.58 13.50 5 24 400 44.1 5.14 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLQGLEIELQSQLSmK Unambiguous 5 2 P13646;P08727 M15(Oxidation) CID 1.0000 0.0000 1 1 236 4.39 0.00 0 8 19 3 611.99554 1833.97208 5.10 42.09 5446 5446 MS2 31/60 Linfeng_20130408_Smad2_8.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 246 3.83 0.00 0 4 14 2 515.30298 1029.59868 4.60 40.73 5134 5134 MS2 15/16 Linfeng_20130405_rIgG4.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 239 3.79 0.00 0 4 37 2 515.30493 1029.60259 8.40 40.53 4805 4805 MS2 15/16 Linfeng_20130408_Smad2_5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.79 0.00 0 16 13 2 515.30298 1029.59868 4.60 40.67 4893 4893 MS2 15/16 Linfeng_20130405_rIgG2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 15 14 2 561.79596 1122.58464 5.03 36.83 3546 3546 MS2 15/16 Linfeng_20130408_Smad2_1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.75 0.00 0 13 15 2 515.30280 1029.59831 4.25 40.67 4877 4877 MS2 15/16 Linfeng_20130405_rIgG6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.72 0.00 0 11 22 2 515.30261 1029.59795 3.89 40.73 5147 5147 MS2 15/16 Linfeng_20130405_rIgG9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 250 3.70 0.00 0 4 7 2 515.30365 1029.60002 5.91 40.33 4680 4680 MS2 15/16 Linfeng_20130408_Smad2_9.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 243 3.61 0.00 0 0 8 2 515.30255 1029.59783 3.77 40.68 4785 4785 MS2 15/16 Linfeng_20130405_rIgG7.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.60 0.00 0 7 13 2 515.30273 1029.59819 4.13 40.74 4683 4683 MS2 15/16 Linfeng_20130405_rIgG10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.60 0.00 0 18 50 2 561.79767 1122.58806 8.07 36.69 3508 3508 MS2 15/16 Linfeng_20130408_Smad2_4.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 248 3.58 0.00 0 2 18 2 515.30341 1029.59953 5.43 40.55 4483 4483 MS2 15/16 Linfeng_20130408_Smad2_6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 245 3.58 0.00 0 7 8 2 515.30249 1029.59770 3.65 40.67 4875 4875 MS2 15/16 Linfeng_20130405_rIgG3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 237 3.56 0.00 0 2 30 2 515.30493 1029.60259 8.40 40.55 4622 4622 MS2 15/16 Linfeng_20130408_Smad2_3.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 261 3.46 0.00 0 4 15 2 515.30316 1029.59905 4.96 40.50 4401 4401 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 282 3.43 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.44 3089 3089 MS2 15/16 Linfeng_20130408_Smad2_10.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.41 0.00 0 11 50 2 561.79736 1122.58745 7.53 36.77 3457 3457 MS2 15/16 Linfeng_20130408_Smad2_3.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.38 0.00 0 9 50 2 561.79736 1122.58745 7.53 36.71 3284 3284 MS2 15/16 Linfeng_20130408_Smad2_7.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 298 3.34 0.00 0 18 50 2 561.79712 1122.58696 7.09 36.71 3326 3326 MS2 15/16 Linfeng_20130408_Smad2_6.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 244 3.30 0.00 0 14 9 2 515.30273 1029.59819 4.13 40.66 5282 5282 MS2 15/16 Linfeng_20130405_rIgG8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 276 3.29 0.00 0 22 50 2 561.79730 1122.58733 7.42 36.52 3428 3428 MS2 15/16 Linfeng_20130408_Smad2_9.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 283 3.24 0.00 0 11 50 2 561.79724 1122.58721 7.31 36.87 3324 3324 MS2 15/16 Linfeng_20130408_Smad2_2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 273 3.24 0.00 0 6 50 2 561.79370 1122.58013 1.00 36.67 3568 3568 MS2 15/16 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 141 3.17 0.00 1 22 36 2 532.81140 1064.61553 5.27 37.27 3822 3822 MS2 13/16 Linfeng_20130405_rIgG2.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 300 3.16 0.00 0 13 36 2 561.79688 1122.58647 6.66 36.48 3579 3579 MS2 15/16 Linfeng_20130408_Smad2_8.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 249 3.14 0.00 0 23 36 2 561.79547 1122.58367 4.16 36.89 3551 3551 MS2 15/16 Linfeng_20130405_rIgG1.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 238 3.13 0.00 0 1 50 2 515.30469 1029.60210 7.92 40.69 4469 4469 MS2 15/16 Linfeng_20130408_Smad2_2.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 236 3.13 0.00 0 61 21 2 515.30255 1029.59783 3.77 40.67 5265 5265 MS2 15/16 Linfeng_20130405_rIgG5.raw High VLDELTLAR Unambiguous 12 4 P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 229 3.11 0.00 0 8 37 2 515.30304 1029.59880 4.72 40.70 4768 4768 MS2 15/16 Linfeng_20130405_rIgG1.raw High SQYEVmAEQNR Unambiguous 1 1 P08727 M6(Oxidation) CID 1.0000 0.0000 1 1 82 3.08 0.00 0 42 50 2 685.80841 1370.60954 6.56 34.16 2798 2798 MS2 16/20 Linfeng_20130405_rIgG6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 142 3.03 0.00 1 5 27 2 532.81165 1064.61601 5.73 37.34 3759 3759 MS2 14/16 Linfeng_20130405_rIgG6.raw High LEQEIATYR Unambiguous 11 5 P13646;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 260 3.01 0.00 0 34 50 2 561.79437 1122.58147 2.20 36.86 3568 3568 MS2 15/16 Linfeng_20130405_rIgG7.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.91 0.00 1 3 50 2 532.81317 1064.61907 8.60 37.08 3442 3442 MS2 13/16 Linfeng_20130408_Smad2_6.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 127 2.89 0.00 1 11 50 2 532.81213 1064.61699 6.65 37.08 3697 3697 MS2 14/16 Linfeng_20130408_Smad2_5.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 145 2.86 0.00 1 28 50 2 532.81305 1064.61882 8.37 37.11 3642 3642 MS2 13/16 Linfeng_20130408_Smad2_4.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 139 2.72 0.00 1 31 50 2 532.81219 1064.61711 6.76 37.17 3659 3659 MS2 13/16 Linfeng_20130408_Smad2_1.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 140 2.58 0.00 1 22 50 2 532.81219 1064.61711 6.76 36.95 3571 3571 MS2 14/16 Linfeng_20130408_Smad2_9.raw High LASYLDKVR Unambiguous 10 5 P13645;P02533;P08779;Q04695;P08727 CID 1.0000 0.0000 1 1 147 2.58 0.00 1 18 50 2 532.81287 1064.61846 8.03 37.29 3458 3458 MS2 14/16 Linfeng_20130408_Smad2_2.raw High mSVEADINGLR Unambiguous 3 2 P02533;P08727 M1(Oxidation) CID 1.0000 0.0000 1 1 257 2.58 0.00 0 21 50 2 610.80475 1220.60222 6.71 38.85 4132 4132 MS2 15/20 Linfeng_20130408_Smad2_1.raw B7Z5D8 Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=2 SV=1 - [B7Z5D8_HUMAN] 16.17 3 2 2 4 14.33 16.17 2 4 167 17.9 5.58 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VVLAYEPVWAIGTGK Unambiguous 3 1 B7Z5D8 CID 1.0000 0.0000 1 1 161 3.89 0.00 0 2 17 2 801.95166 1602.89604 4.34 42.07 5302 5302 MS2 20/28 Linfeng_20130408_Smad2_9.raw High SNVSDAVAQSTR Unambiguous 3 1 B7Z5D8 CID 1.0000 0.0000 1 1 278 3.72 0.00 0 23 50 2 617.80865 1234.61003 6.29 34.90 2904 2904 MS2 20/22 Linfeng_20130408_Smad2_9.raw High VVLAYEPVWAIGTGK Unambiguous 3 1 B7Z5D8 CID 1.0000 0.0000 1 1 182 3.53 0.00 0 15 19 3 534.96997 1602.89536 3.92 42.08 5305 5305 MS2 29/56 Linfeng_20130408_Smad2_9.raw High SNVSDAVAQSTR Unambiguous 3 1 B7Z5D8 CID 1.0000 0.0000 1 1 275 3.19 0.00 0 35 50 2 617.80890 1234.61052 6.68 34.99 2983 2983 MS2 18/22 Linfeng_20130408_Smad2_4.raw E9PF79 Pyruvate kinase OS=Homo sapiens GN=PKM2 PE=3 SV=1 - [E9PF79_HUMAN] 15.94 13 5 5 5 17.18 15.94 5 5 458 50.0 7.64 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAPITSDPTEATAVGAVEASFK Unambiguous 3 1 E9PF79 CID 1.0000 0.0000 1 1 269 4.63 0.00 0 12 42 3 725.71429 2175.12833 4.72 41.88 5233 5233 MS2 33/84 Linfeng_20130408_Smad2_9.raw High KGVNLPGAAVDLPAVSEK Unambiguous 9 1 E9PF79 CID 1.0000 0.0000 1 1 100 3.62 0.00 1 42 50 3 589.00452 1764.99900 7.63 39.94 4549 4549 MS2 26/68 Linfeng_20130408_Smad2_9.raw High LDIDSPPITAR Unambiguous 10 1 E9PF79 CID 1.0000 0.0000 1 1 164 3.28 0.00 0 29 50 2 599.33051 1197.65373 5.25 39.37 4358 4358 MS2 14/20 Linfeng_20130408_Smad2_9.raw High NTGIIcTIGPASR Unambiguous 10 1 E9PF79 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 317 3.10 0.00 0 29 50 2 680.35968 1359.71208 5.23 38.92 4207 4207 MS2 19/24 Linfeng_20130408_Smad2_9.raw High VNFAMNVGK Unambiguous 7 1 E9PF79 CID 1.0000 0.0000 1 1 164 2.55 0.00 0 38 50 2 490.25879 979.51030 7.43 38.64 4114 4114 MS2 15/16 Linfeng_20130408_Smad2_9.raw H0Y6E7 "RNA-binding motif protein, X chromosome, N-terminally processed (Fragment) OS=Homo sapiens GN=RBMX PE=4 SV=2 - [H0Y6E7_HUMAN]" 15.75 7 3 3 3 10.82 15.75 3 3 0.00 292 31.8 9.85 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFAFVTFESPADAK Unambiguous 6 1 H0Y6E7 CID 1.0000 0.0000 1 1 212 3.78 0.00 0 39 10 2 743.86890 1486.73052 6.16 42.13 5442 5442 MS2 20/26 Linfeng_20130405_rIgG6.raw High GGHmDDGGYSmNFNmSSSR Unambiguous 5 1 H0Y6E7 M4(Oxidation); M11(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 7 3.75 0.00 0 18 50 3 699.93231 2097.78238 6.09 34.60 2921 2921 MS2 30/72 Linfeng_20130405_rIgG6.raw High LFIGGLNTETNEK Unambiguous 7 1 H0Y6E7 CID 1.0000 0.0000 1 1 250 3.28 0.00 0 57 44 2 718.37854 1435.74980 4.88 40.79 4921 4921 MS2 19/24 Linfeng_20130405_rIgG6.raw P01857 Ig gamma-1 chain C region OS=Homo sapiens GN=IGHG1 PE=1 SV=1 - [IGHG1_HUMAN] 15.15 3 4 4 5 13.51 15.15 4 5 330 36.1 8.19 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQVSLTcLVK Unambiguous 3 1 P01857 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 2.80 0.00 0 57 50 2 581.32275 1161.63823 7.37 39.97 4557 4557 MS2 12/18 Linfeng_20130408_Smad2_9.raw High NQVSLTcLVK Unambiguous 3 1 P01857 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.72 0.00 0 24 40 2 581.32172 1161.63616 5.59 39.83 4080 4080 MS2 15/18 Linfeng_20130408_Smad2_10.raw High GPSVFPLAPSSK Unambiguous 1 1 P01857 CID 1.0000 0.0000 1 1 246 2.71 0.00 0 13 50 2 593.82977 1186.65227 4.68 40.41 4707 4707 MS2 15/22 Linfeng_20130408_Smad2_9.raw High EPQVYTLPPSR Unambiguous 3 1 P01857 CID 1.0000 0.0000 1 1 290 2.65 0.00 0 26 50 2 643.84564 1286.68401 7.80 37.83 3841 3841 MS2 10/20 Linfeng_20130408_Smad2_9.raw High TTPPVLDSDGSFFLYSK Unambiguous 1 1 P01857 CID 1.0000 0.0000 1 1 165 2.63 0.00 0 2 37 2 937.46918 1873.93108 4.90 41.96 5260 5260 MS2 20/32 Linfeng_20130408_Smad2_9.raw F8WE65 Peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPIA PE=3 SV=1 - [F8WE65_HUMAN] 15.00 3 2 2 2 5.39 15.00 2 2 120 13.0 6.77 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VSFELFADK Unambiguous 3 1 F8WE65 CID 1.0000 0.0000 1 1 164 2.79 0.00 0 15 50 2 528.27673 1055.54619 5.07 41.72 5169 5169 MS2 14/16 Linfeng_20130408_Smad2_9.raw High FEDENFILK Unambiguous 3 1 F8WE65 CID 1.0000 0.0000 1 1 193 2.61 0.00 0 25 16 2 577.79376 1154.58025 6.39 41.02 4912 4912 MS2 14/16 Linfeng_20130408_Smad2_9.raw E7EWI9 Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=4 SV=1 - [E7EWI9_HUMAN] 14.91 4 3 3 5 13.17 11.80 2 3 7.33 9.94 2 2 322 34.1 8.32 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 4 1 E7EWI9 CID 1.0000 0.0000 1 1 29 4.96 0.00 0 0 50 2 955.90393 1910.80058 5.52 35.59 3214 3214 MS2 28/42 Linfeng_20130405_rIgG6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 4 1 E7EWI9 CID 1.0000 0.0000 1 1 30 4.96 0.00 0 0 50 2 955.90314 1910.79900 4.69 35.55 3156 3156 MS2 25/42 Linfeng_20130405_rIgG7.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 4 1 E7EWI9 CID 1.0000 0.0000 1 1 28 4.65 0.00 0 18 50 2 955.90302 1910.79875 4.56 35.45 2942 2942 MS2 29/42 Linfeng_20130408_Smad2_6.raw High IFVGGIKEDTEEYNLR Unambiguous 4 1 E7EWI9 CID 1.0000 0.0000 1 1 227 3.24 0.00 1 12 39 3 628.32611 1882.96378 4.87 40.10 4588 4588 MS2 26/60 Linfeng_20130405_rIgG7.raw High IETIEVMEDR Unambiguous 4 1 E7EWI9 CID 1.0000 0.0000 1 1 252 2.68 0.00 0 43 50 2 617.80719 1234.60710 7.01 39.66 4204 4204 MS2 16/18 Linfeng_20130408_Smad2_6.raw O14818-2 Isoform 2 of Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 - [PSA7_HUMAN] 14.61 2 2 2 2 5.92 14.61 2 2 178 20.2 8.51 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALLEVVQSGGK Unambiguous 2 1 O14818-2 CID 1.0000 0.0000 1 1 275 3.06 0.00 0 42 50 2 550.82239 1100.63750 5.85 39.32 4339 4339 MS2 16/20 Linfeng_20130408_Smad2_9.raw High NYTDEAIETDDLTIK Unambiguous 2 1 O14818-2 CID 1.0000 0.0000 1 1 179 2.87 0.00 0 21 50 2 870.91980 1740.83232 8.53 40.42 4674 4674 MS2 14/28 Linfeng_20130408_Smad2_4.raw P68371 Tubulin beta-4B chain OS=Homo sapiens GN=TUBB4B PE=1 SV=1 - [TBB4B_HUMAN] 14.16 23 5 5 6 21.06 14.16 5 6 445 49.8 4.89 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NSSYFVEWIPNNVK Unambiguous 21 1 P68371 CID 1.0000 0.0000 1 1 252 4.39 0.00 0 4 35 2 848.92389 1696.84050 4.42 41.87 5226 5226 MS2 20/26 Linfeng_20130408_Smad2_9.raw High EVDEQmLNVQNK Unambiguous 14 1 P68371 M6(Oxidation) CID 1.0000 0.0000 1 1 141 3.93 0.00 0 9 50 2 731.85046 1462.69365 6.39 35.25 3018 3018 MS2 18/22 Linfeng_20130408_Smad2_9.raw High LAVNmVPFPR Unambiguous 23 1 P68371 M5(Oxidation) CID 1.0000 0.0000 1 1 291 3.52 0.00 0 41 50 2 580.32135 1159.63542 5.28 40.31 4671 4671 MS2 17/18 Linfeng_20130408_Smad2_9.raw High LAVNMVPFPR Unambiguous 23 1 P68371 CID 1.0000 0.0000 1 1 258 3.20 0.00 0 16 28 2 572.32288 1143.63848 3.58 41.47 5077 5077 MS2 14/18 Linfeng_20130408_Smad2_9.raw High AVLVDLEPGTmDSVR Unambiguous 4 1 P68371 M11(Oxidation) CID 1.0000 0.0000 1 1 220 3.14 0.00 0 8 50 2 809.41724 1617.82720 7.32 40.53 4747 4747 MS2 17/28 Linfeng_20130408_Smad2_9.raw High INVYYNEATGGK Unambiguous 1 1 P68371 CID 1.0000 0.0000 1 1 164 2.87 0.00 0 10 50 2 664.82959 1328.65190 2.83 37.34 3688 3688 MS2 16/22 Linfeng_20130408_Smad2_9.raw Q16851-2 Isoform 2 of UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 - [UGPA_HUMAN] 14.08 12 5 5 5 15.39 14.08 5 5 497 55.6 7.88 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLDGGLNVIQLETAVGAAIK Unambiguous 4 1 Q16851-2 CID 1.0000 0.0000 1 1 77 3.47 0.00 0 68 44 3 661.71155 1983.12009 3.98 42.73 5492 5492 MS2 25/76 Linfeng_20130408_Smad2_4.raw High IQRPPEDSIQPYEK Unambiguous 12 1 Q16851-2 CID 1.0000 0.0000 1 1 236 3.45 0.00 1 14 50 3 567.29724 1699.87717 7.14 36.24 3366 3366 MS2 25/52 Linfeng_20130408_Smad2_4.raw High GTVIIIANHGDR Unambiguous 4 1 Q16851-2 CID 1.0000 0.0000 1 1 156 3.06 0.00 0 24 50 2 633.35693 1265.70659 8.27 36.71 3514 3514 MS2 16/22 Linfeng_20130408_Smad2_4.raw High GLPDNISSVLNK Unambiguous 12 1 Q16851-2 CID 1.0000 0.0000 1 1 200 2.87 0.00 0 8 34 2 628.84930 1256.69133 5.40 41.07 4884 4884 MS2 16/22 Linfeng_20130408_Smad2_4.raw High IDIPPGAVLENK Unambiguous 4 1 Q16851-2 CID 1.0000 0.0000 1 1 134 2.54 0.00 0 33 50 2 633.36310 1265.71892 7.01 39.90 4508 4508 MS2 15/22 Linfeng_20130408_Smad2_4.raw P25705 "ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1 PE=1 SV=1 - [ATPA_HUMAN]" 13.92 2 6 6 7 22.92 13.92 6 7 553 59.7 9.13 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TGAIVDVPVGEELLGR Unambiguous 2 1 P25705 CID 1.0000 0.0000 1 1 146 3.95 0.00 0 14 19 2 812.95245 1624.89763 4.35 41.83 5213 5213 MS2 24/30 Linfeng_20130408_Smad2_9.raw High ILGADTSVDLEETGR Unambiguous 2 1 P25705 CID 1.0000 0.0000 1 1 252 3.53 0.00 0 23 50 2 788.40118 1575.79509 5.68 39.59 4428 4428 MS2 20/28 Linfeng_20130408_Smad2_9.raw High TSIAIDTIINQK Unambiguous 2 1 P25705 CID 1.0000 0.0000 1 1 203 3.47 0.00 0 19 50 2 658.87677 1316.74626 3.19 40.90 4872 4872 MS2 17/22 Linfeng_20130408_Smad2_9.raw High TGTAEMSSILEER Unambiguous 1 1 P25705 CID 1.0000 0.0000 1 1 173 3.41 0.00 0 20 50 2 712.34540 1423.68352 7.10 40.08 4595 4595 MS2 17/24 Linfeng_20130408_Smad2_9.raw High TGTAEmSSILEER Unambiguous 1 1 P25705 M6(Oxidation) CID 1.0000 0.0000 1 1 166 3.07 0.00 0 48 50 2 720.34241 1439.67754 6.40 37.05 3606 3606 MS2 14/24 Linfeng_20130408_Smad2_9.raw High AVDSLVPIGR Unambiguous 2 1 P25705 CID 1.0000 0.0000 1 1 142 2.87 0.00 0 22 50 2 513.80511 1026.60295 8.45 39.92 4540 4540 MS2 16/18 Linfeng_20130408_Smad2_9.raw High HALIIYDDLSK Unambiguous 2 1 P25705 CID 1.0000 0.0000 1 1 260 2.62 0.00 0 34 50 2 644.35571 1287.70415 7.59 39.93 4545 4545 MS2 16/20 Linfeng_20130408_Smad2_9.raw P00338 L-lactate dehydrogenase A chain OS=Homo sapiens GN=LDHA PE=1 SV=2 - [LDHA_HUMAN] 13.55 10 4 4 5 17.37 13.55 4 5 332 36.7 8.27 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLADELALVDVIEDK Unambiguous 8 1 P00338 CID 1.0000 0.0000 1 1 258 5.15 0.00 0 3 50 2 829.43567 1657.86406 6.57 42.98 5575 5575 MS2 23/28 Linfeng_20130408_Smad2_4.raw High DLADELALVDVIEDK Unambiguous 8 1 P00338 CID 1.0000 0.0000 1 1 260 3.49 0.00 0 51 50 3 553.29211 1657.86179 5.20 42.99 5581 5581 MS2 24/56 Linfeng_20130408_Smad2_4.raw High QVVESAYEVIK Unambiguous 5 1 P00338 CID 1.0000 0.0000 1 1 190 3.32 0.00 0 26 50 2 632.84692 1264.68657 6.47 39.19 4275 4275 MS2 14/20 Linfeng_20130408_Smad2_4.raw High VTLTSEEEAR Unambiguous 5 1 P00338 CID 1.0000 0.0000 1 1 235 2.73 0.00 0 7 50 2 567.78882 1134.57036 5.82 34.90 2903 2903 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DYNVTANSK Unambiguous 8 1 P00338 CID 1.0000 0.0000 1 1 120 2.67 0.00 0 13 50 2 506.24380 1011.48033 6.07 33.44 2451 2451 MS2 13/16 Linfeng_20130408_Smad2_9.raw Q00839-2 Isoform Short of Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens GN=HNRNPU - [HNRPU_HUMAN] 13.52 3 7 7 11 22.80 10.05 4 5 20.00 8.44 5 6 806 88.9 5.78 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 237 5.24 0.00 1 3 5 3 908.79559 2724.37223 6.08 42.23 5499 5499 MS2 26/84 Linfeng_20130405_rIgG3.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR Unambiguous 2 1 Q00839-2 M16(Oxidation) CID 1.0000 0.0000 1 1 137 5.01 0.00 1 0 23 3 1048.15479 3142.44980 4.91 38.91 4274 4274 MS2 34/124 Linfeng_20130405_rIgG3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 2 1 Q00839-2 CID 1.0000 0.0000 1 1 150 4.91 0.00 1 15 50 3 1042.82324 3126.45517 5.03 39.82 4587 4587 MS2 33/124 Linfeng_20130405_rIgG3.raw High NFILDQTNVSAAAQR Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 266 4.77 0.00 0 13 50 2 824.43213 1647.85698 7.28 40.45 4591 4591 MS2 24/28 Linfeng_20130408_Smad2_3.raw High NFILDQTNVSAAAQR Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 273 4.55 0.00 0 6 7 2 824.42999 1647.85271 4.69 40.61 4852 4852 MS2 23/28 Linfeng_20130405_rIgG3.raw High YNILGTNTImDK Unambiguous 3 1 Q00839-2 M10(Oxidation) CID 1.0000 0.0000 1 1 257 3.25 0.00 0 5 50 2 699.85297 1398.69866 3.76 39.86 4401 4401 MS2 18/22 Linfeng_20130408_Smad2_3.raw High GYFEYIEENK Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 123 3.19 0.00 0 25 50 2 646.30170 1291.59612 9.27 40.77 4693 4693 MS2 15/18 Linfeng_20130408_Smad2_3.raw High YNILGTNTImDK Unambiguous 3 1 Q00839-2 M10(Oxidation) CID 1.0000 0.0000 1 1 257 3.08 0.00 0 12 25 2 699.85291 1398.69853 3.67 40.04 4657 4657 MS2 19/22 Linfeng_20130405_rIgG3.raw High LQAALDDEEAGGR Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 152 2.95 0.00 0 51 50 2 672.82910 1344.65093 8.81 36.16 3265 3265 MS2 14/24 Linfeng_20130408_Smad2_3.raw High YNILGTNTImDK Unambiguous 3 1 Q00839-2 M10(Oxidation) CID 1.0000 0.0000 1 1 244 2.95 0.00 0 38 50 2 699.85406 1398.70085 5.33 40.02 4260 4260 MS2 16/22 Linfeng_20130408_Smad2_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 3 1 Q00839-2 CID 1.0000 0.0000 1 1 235 2.89 0.00 0 24 29 2 857.96423 1714.92119 5.15 41.74 5035 5035 MS2 18/34 Linfeng_20130408_Smad2_3.raw Q15796-2 Isoform Short of Mothers against decapentaplegic homolog 2 OS=Homo sapiens GN=SMAD2 - [SMAD2_HUMAN] 13.50 2 4 4 4 13.86 13.50 4 4 437 48.9 7.09 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGETFHASQPSLTVDGFTDPSNSER Unambiguous 2 1 Q15796-2 CID 1.0000 0.0000 1 1 156 4.45 0.00 0 14 50 3 893.42139 2678.24961 6.20 40.29 4726 4726 MS2 30/96 Linfeng_20130408_Smad2_5.raw High AIENcEYAFNLK Unambiguous 2 1 Q15796-2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 144 3.57 0.00 0 31 50 2 736.35303 1471.69878 6.89 40.31 4732 4732 MS2 18/22 Linfeng_20130408_Smad2_5.raw High FcLGLLSNVNR Unambiguous 2 1 Q15796-2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 258 3.30 0.00 0 26 14 2 646.84460 1292.68193 3.02 41.82 5281 5281 MS2 17/20 Linfeng_20130408_Smad2_5.raw High VLTQmGSPSVR Unambiguous 2 1 Q15796-2 M5(Oxidation) CID 1.0000 0.0000 1 1 252 2.55 0.00 0 32 50 2 595.81848 1190.62969 8.26 34.27 2860 2860 MS2 13/20 Linfeng_20130408_Smad2_5.raw E9PBF6 Lamin-B1 OS=Homo sapiens GN=LMNB1 PE=3 SV=1 - [E9PBF6_HUMAN] 13.44 2 4 4 5 7.95 7.75 2 2 9.00 9.82 3 3 387 44.6 5.05 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SLETENSALQLQVTER Unambiguous 2 1 E9PBF6 CID 1.0000 0.0000 1 1 273 4.26 0.00 0 7 38 2 909.46991 1817.93254 4.69 40.19 4940 4940 MS2 21/30 Linfeng_20130405_rIgG4.raw High LSSEMNTSTVNSAR Unambiguous 2 1 E9PBF6 CID 1.0000 0.0000 1 1 172 3.69 0.00 0 8 50 2 748.85925 1496.71123 6.83 35.27 3340 3340 MS2 20/26 Linfeng_20130405_rIgG4.raw High SLETENSALQLQVTER Unambiguous 2 1 E9PBF6 CID 1.0000 0.0000 1 1 265 3.54 0.00 0 0 50 2 909.47253 1817.93779 7.57 39.93 4518 4518 MS2 17/30 Linfeng_20130408_Smad2_4.raw High SmYEEEINETR Unambiguous 2 1 E9PBF6 M2(Oxidation) CID 1.0000 0.0000 1 1 48 2.76 0.00 0 11 50 2 708.80786 1416.60845 9.63 35.77 3217 3217 MS2 15/20 Linfeng_20130408_Smad2_4.raw High ALYETELADAR Unambiguous 2 1 E9PBF6 CID 1.0000 0.0000 1 1 240 2.70 0.00 0 41 50 2 626.32050 1251.63371 9.67 38.92 4189 4189 MS2 15/20 Linfeng_20130408_Smad2_4.raw B4DQ49 "Keratin, type II cytoskeletal 78 OS=Homo sapiens GN=KRT78 PE=2 SV=1 - [B4DQ49_HUMAN]" 13.40 3 2 4 16 47.18 13.40 4 16 291 31.4 5.20 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDELEAALR Unambiguous 3 1 B4DQ49 CID 1.0000 0.0000 1 1 287 3.35 0.00 0 12 50 2 508.27826 1015.54924 7.22 39.73 4225 4225 MS2 15/16 Linfeng_20130408_Smad2_6.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 231 3.35 0.00 0 39 50 2 562.28851 1123.56975 5.99 35.89 3021 3021 MS2 15/18 Linfeng_20130408_Smad2_2.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 241 3.23 0.00 0 47 50 2 562.28894 1123.57060 6.75 35.76 3035 3035 MS2 15/18 Linfeng_20130408_Smad2_6.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 3.21 0.00 0 83 50 2 562.28802 1123.56877 5.12 35.67 3268 3268 MS2 15/18 Linfeng_20130408_Smad2_5.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 225 3.11 0.00 0 44 50 2 562.28754 1123.56780 4.25 35.74 2990 2990 MS2 15/18 Linfeng_20130408_Smad2_7.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 215 3.09 0.00 0 53 50 2 562.28821 1123.56914 5.45 35.44 2799 2799 MS2 15/18 Linfeng_20130408_Smad2_10.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 221 2.98 0.00 0 25 50 2 562.28833 1123.56938 5.66 35.79 3154 3154 MS2 15/18 Linfeng_20130408_Smad2_3.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 224 2.90 0.00 0 44 50 2 562.28882 1123.57036 6.53 35.71 3199 3199 MS2 15/18 Linfeng_20130408_Smad2_4.raw High VDELEAALR Unambiguous 3 1 B4DQ49 CID 1.0000 0.0000 1 1 301 2.89 0.00 0 34 50 2 508.27756 1015.54784 5.84 39.81 4455 4455 MS2 15/16 Linfeng_20130408_Smad2_1.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 254 2.87 0.00 0 25 50 2 562.28717 1123.56706 3.60 35.92 3248 3248 MS2 15/18 Linfeng_20130408_Smad2_1.raw High VDELEAALR Unambiguous 3 1 B4DQ49 CID 1.0000 0.0000 1 1 296 2.84 0.00 0 34 50 2 508.27765 1015.54802 6.02 39.86 4208 4208 MS2 14/16 Linfeng_20130408_Smad2_2.raw High VDELEAALR Unambiguous 3 1 B4DQ49 CID 1.0000 0.0000 1 1 266 2.83 0.00 0 28 50 2 508.27841 1015.54955 7.52 39.69 4523 4523 MS2 14/16 Linfeng_20130408_Smad2_5.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 2.71 0.00 0 56 50 2 562.28815 1123.56902 5.34 35.48 3253 3253 MS2 15/18 Linfeng_20130408_Smad2_8.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High VQISQLHQEIQR Unambiguous 3 1 B4DQ49 CID 1.0000 0.0000 1 1 170 2.63 0.00 0 27 50 2 739.91418 1478.82109 9.22 37.06 3549 3549 MS2 13/22 Linfeng_20130408_Smad2_3.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw Q7Z794 "Keratin, type II cytoskeletal 1b OS=Homo sapiens GN=KRT77 PE=1 SV=3 - [K2C1B_HUMAN]" 13.32 2 6 7 20 0.00 72.59 13.32 7 20 578 61.9 5.99 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 247 4.41 0.00 0 4 50 2 738.40082 1475.79436 6.12 37.95 3953 3953 MS2 20/22 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 259 4.41 0.00 0 2 33 2 738.40228 1475.79729 8.11 37.82 3840 3840 MS2 20/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.39 0.00 0 31 50 2 738.40118 1475.79509 6.62 38.14 3658 3658 MS2 20/22 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 253 4.37 0.00 0 2 37 2 738.40173 1475.79619 7.36 38.05 3810 3810 MS2 20/22 Linfeng_20130408_Smad2_3.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 4.21 0.00 0 10 17 2 738.40125 1475.79521 6.70 37.82 3961 3961 MS2 20/22 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 239 4.14 0.00 0 4 50 2 738.40125 1475.79521 6.70 37.67 3397 3397 MS2 20/22 Linfeng_20130408_Smad2_10.raw High VDTLTGEVNFLK Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 223 4.13 0.00 0 8 12 2 668.36401 1335.72075 3.92 41.46 5072 5072 MS2 20/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 248 4.10 0.00 0 3 46 2 738.40125 1475.79521 6.70 38.11 3886 3886 MS2 20/22 Linfeng_20130408_Smad2_1.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 272 3.99 0.00 0 29 50 2 738.39746 1475.78765 1.57 37.90 3650 3650 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SLDLDSIIDAVR Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 293 3.93 0.00 0 32 50 2 658.85950 1316.71172 4.58 42.59 5488 5488 MS2 19/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 249 3.89 0.00 0 31 50 2 738.40302 1475.79875 9.10 40.49 4465 4465 MS2 18/22 Linfeng_20130408_Smad2_6.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.79 0.00 0 6 50 2 738.39850 1475.78972 2.98 37.90 3863 3863 MS2 17/22 Linfeng_20130408_Smad2_4.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 257 3.41 0.00 0 40 50 2 738.39850 1475.78972 2.98 37.90 3586 3586 MS2 16/22 Linfeng_20130408_Smad2_7.raw High FLEQQNQVLQTK Unambiguous 3 3 P35908;Q7Z794;P04264 CID 1.0000 0.0000 1 1 261 3.33 0.00 0 11 35 3 492.60300 1475.79444 6.18 38.11 3830 3830 MS2 26/44 Linfeng_20130408_Smad2_3.raw High SKDEAEALYQTK Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 229 3.03 0.00 1 36 50 2 691.84845 1382.68962 7.07 35.08 2965 2965 MS2 16/22 Linfeng_20130408_Smad2_9.raw High TQYELIAQR Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 258 2.72 0.00 0 28 50 2 561.30542 1121.60356 7.65 38.28 3943 3943 MS2 14/16 Linfeng_20130408_Smad2_1.raw High YQELQITAGR Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 277 2.64 0.00 0 46 50 2 589.81610 1178.62493 7.19 37.84 3847 3847 MS2 14/18 Linfeng_20130408_Smad2_9.raw High TQYELIAQR Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 248 2.59 0.00 0 35 50 2 561.30554 1121.60381 7.87 37.94 3878 3878 MS2 15/16 Linfeng_20130408_Smad2_9.raw High SmQDVVEDYK Unambiguous 2 1 Q7Z794 M2(Oxidation) CID 1.0000 0.0000 1 1 93 2.56 0.00 0 56 50 2 615.27606 1229.54485 7.61 35.74 3291 3291 MS2 13/18 Linfeng_20130408_Smad2_5.raw High TQYELIAQR Unambiguous 2 1 Q7Z794 CID 1.0000 0.0000 1 1 236 2.55 0.00 0 41 50 2 561.30475 1121.60222 6.45 38.15 3661 3661 MS2 14/16 Linfeng_20130408_Smad2_7.raw E9PGK3 Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=4 SV=1 - [E9PGK3_HUMAN] 13.19 10 2 3 5 17.19 13.19 3 5 326 36.7 8.44 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AVFVDLEPTVIDEVR Unambiguous 6 1 E9PGK3 CID 1.0000 0.0000 1 1 211 4.25 0.00 0 2 29 2 851.46027 1701.91326 4.34 42.08 5304 5304 MS2 22/28 Linfeng_20130408_Smad2_9.raw High VGINYQPPTVVPGGDLAK Unambiguous 12 2 E9PGK3;A8MUB1 CID 1.0000 0.0000 1 1 146 4.17 0.00 0 12 32 2 913.00354 1824.99980 7.83 40.56 4758 4758 MS2 24/34 Linfeng_20130408_Smad2_9.raw High VGINYQPPTVVPGGDLAK Unambiguous 12 2 E9PGK3;A8MUB1 CID 1.0000 0.0000 1 1 152 3.35 0.00 0 40 48 2 913.00317 1824.99907 7.43 40.72 4773 4773 MS2 17/34 Linfeng_20130408_Smad2_4.raw High DVNAAIATIK Unambiguous 10 1 E9PGK3 CID 1.0000 0.0000 1 1 298 2.81 0.00 0 24 43 2 508.29507 1015.58287 4.51 38.98 4227 4227 MS2 16/18 Linfeng_20130408_Smad2_9.raw High DVNAAIATIK Unambiguous 10 1 E9PGK3 CID 1.0000 0.0000 1 1 331 2.61 0.00 0 42 50 2 508.29636 1015.58544 7.03 39.18 4273 4273 MS2 16/18 Linfeng_20130408_Smad2_4.raw P04792 Heat shock protein beta-1 OS=Homo sapiens GN=HSPB1 PE=1 SV=2 - [HSPB1_HUMAN] 13.17 1 2 2 2 8.18 13.17 2 2 205 22.8 6.40 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LATQSNEITIPVTFESR Unambiguous 1 1 P04792 CID 1.0000 0.0000 1 1 182 4.51 0.00 0 4 31 2 953.50385 1906.00041 4.57 41.35 5033 5033 MS2 18/32 Linfeng_20130408_Smad2_9.raw High LFDQAFGLPR Unambiguous 1 1 P04792 CID 1.0000 0.0000 1 1 242 3.67 0.00 0 12 22 2 582.31677 1163.62627 4.67 41.74 5175 5175 MS2 17/18 Linfeng_20130408_Smad2_9.raw B3KV55 Glutamate dehydrogenase OS=Homo sapiens GN=GLUD1 PE=2 SV=1 - [B3KV55_HUMAN] 13.04 6 3 3 3 10.36 13.04 3 3 391 42.9 7.58 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIAEGANGPTTPEADK Unambiguous 6 1 B3KV55 CID 1.0000 0.0000 1 1 208 3.84 0.00 0 7 50 2 792.40643 1583.80559 9.07 35.28 3075 3075 MS2 22/30 Linfeng_20130408_Smad2_4.raw High GFIGPGIDVPAPDMSTGER Unambiguous 5 1 B3KV55 CID 1.0000 0.0000 1 1 190 3.38 0.00 0 0 25 2 958.46912 1915.93096 4.69 41.66 5100 5100 MS2 17/36 Linfeng_20130408_Smad2_4.raw High HGGTIPIVPTAEFQDR Unambiguous 6 1 B3KV55 CID 1.0000 0.0000 1 1 203 3.14 0.00 0 7 50 2 869.45740 1737.90752 8.96 40.12 4578 4578 MS2 15/30 Linfeng_20130408_Smad2_4.raw C9JI87 Voltage-dependent anion-selective channel protein 1 (Fragment) OS=Homo sapiens GN=VDAC1 PE=4 SV=1 - [C9JI87_HUMAN] 13.04 2 2 2 2 5.97 13.04 2 2 184 20.4 7.33 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LTFDSSFSPNTGK Unambiguous 2 1 C9JI87 CID 1.0000 0.0000 1 1 174 3.35 0.00 0 30 50 2 700.84369 1400.68010 7.72 39.90 4534 4534 MS2 18/24 Linfeng_20130408_Smad2_9.raw High VTQSNFAVGYK Unambiguous 2 1 C9JI87 CID 1.0000 0.0000 1 1 175 2.63 0.00 0 24 50 2 607.31488 1213.62248 1.06 37.24 3661 3661 MS2 16/20 Linfeng_20130408_Smad2_9.raw Q9NZT1 Calmodulin-like protein 5 OS=Homo sapiens GN=CALML5 PE=1 SV=2 - [CALL5_HUMAN] 13.01 1 2 2 2 6.77 13.01 2 2 146 15.9 4.44 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGLEDLQVAFR Unambiguous 1 1 Q9NZT1 CID 1.0000 0.0000 1 1 280 4.23 0.00 0 15 19 2 609.83057 1218.65386 4.98 41.69 5160 5160 MS2 18/20 Linfeng_20130408_Smad2_9.raw High VNYEEFAR Unambiguous 1 1 Q9NZT1 CID 1.0000 0.0000 1 1 100 2.55 0.00 0 27 50 2 514.24951 1027.49175 7.18 37.99 3893 3893 MS2 12/14 Linfeng_20130408_Smad2_9.raw P68104 Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1 - [EF1A1_HUMAN] 12.77 5 4 4 7 24.23 12.77 4 7 462 50.1 9.01 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VETGVLKPGmVVTFAPVNVTTEVK Unambiguous 3 1 P68104 M10(Oxidation) CID 1.0000 0.0000 1 1 105 4.04 0.00 1 3 26 3 844.46954 2531.39408 5.93 41.15 4958 4958 MS2 30/92 Linfeng_20130408_Smad2_9.raw High VETGVLKPGmVVTFAPVNVTTEVK Unambiguous 3 1 P68104 M10(Oxidation) CID 1.0000 0.0000 1 1 100 3.97 0.00 1 3 30 3 844.47076 2531.39774 7.37 41.22 4936 4936 MS2 31/92 Linfeng_20130408_Smad2_4.raw High IGGIGTVPVGR Unambiguous 4 1 P68104 CID 1.0000 0.0000 1 1 83 3.61 0.00 0 41 50 2 513.31256 1025.61785 7.38 38.13 3942 3942 MS2 17/20 Linfeng_20130408_Smad2_9.raw High IGGIGTVPVGR Unambiguous 4 1 P68104 CID 1.0000 0.0000 1 1 83 3.41 0.00 0 39 50 2 513.31207 1025.61687 6.43 38.24 4094 4094 MS2 16/20 Linfeng_20130408_Smad2_8.raw High IGGIGTVPVGR Unambiguous 4 1 P68104 CID 1.0000 0.0000 1 1 84 3.26 0.00 0 33 50 2 513.31213 1025.61699 6.55 38.35 4088 4088 MS2 17/20 Linfeng_20130408_Smad2_5.raw High EHALLAYTLGVK Unambiguous 4 1 P68104 CID 1.0000 0.0000 1 1 197 3.17 0.00 0 32 39 3 438.92065 1314.74741 4.37 40.72 4813 4813 MS2 21/44 Linfeng_20130408_Smad2_9.raw High YYVTIIDAPGHR Unambiguous 4 1 P68104 CID 1.0000 0.0000 1 1 256 2.78 0.00 0 49 50 2 702.87274 1404.73821 7.93 39.47 4370 4370 MS2 13/22 Linfeng_20130408_Smad2_4.raw F8WD96 Cathepsin D OS=Homo sapiens GN=CTSD PE=3 SV=1 - [F8WD96_HUMAN] 12.68 4 2 2 3 13.01 12.68 2 3 276 30.0 7.42 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISVNNVLPVFDNLmQQK Unambiguous 4 1 F8WD96 M14(Oxidation) CID 1.0000 0.0000 1 1 227 5.01 0.00 0 8 43 3 659.01837 1975.04056 4.43 42.12 5321 5321 MS2 30/64 Linfeng_20130408_Smad2_9.raw High ISVNNVLPVFDNLmQQK Unambiguous 4 1 F8WD96 M14(Oxidation) CID 1.0000 0.0000 1 1 188 4.26 0.00 0 0 50 2 988.02454 1975.04180 5.05 42.13 5325 5325 MS2 18/32 Linfeng_20130408_Smad2_9.raw High DPDAQPGGELmLGGTDSK Unambiguous 4 1 F8WD96 M11(Oxidation) CID 1.0000 0.0000 1 1 106 3.73 0.00 0 0 50 2 902.41541 1803.82353 9.36 38.35 4007 4007 MS2 22/34 Linfeng_20130408_Smad2_4.raw P08319 Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=5 - [ADH4_HUMAN] 12.63 3 4 4 4 13.39 12.63 4 4 380 40.2 7.94 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLHKPIQEVIIELTK Unambiguous 2 1 P08319 CID 1.0000 0.0000 1 1 49 3.87 0.00 1 12 33 3 592.68274 1776.03366 3.95 42.17 5288 5288 MS2 28/56 Linfeng_20130408_Smad2_4.raw High ISEAFDLmNQGK Unambiguous 2 1 P08319 M8(Oxidation) CID 1.0000 0.0000 1 1 180 3.82 0.00 0 19 50 2 684.83209 1368.65691 7.63 38.61 4091 4091 MS2 19/22 Linfeng_20130408_Smad2_4.raw High IDDDANLER Unambiguous 3 1 P08319 CID 1.0000 0.0000 1 1 129 3.02 0.00 0 26 50 2 530.75378 1060.50029 9.14 34.72 2897 2897 MS2 14/16 Linfeng_20130408_Smad2_4.raw High SPASDQQLmEDK Unambiguous 3 1 P08319 M9(Oxidation) CID 1.0000 0.0000 1 1 94 2.68 0.00 0 13 50 2 682.81036 1364.61345 9.93 33.03 2415 2415 MS2 16/22 Linfeng_20130408_Smad2_4.raw Q5XKE5 "Keratin, type II cytoskeletal 79 OS=Homo sapiens GN=KRT79 PE=1 SV=2 - [K2C79_HUMAN]" 12.34 2 3 7 46 83.37 6.54 4 22 87.75 12.34 7 24 535 57.8 7.20 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 252 4.36 0.00 0 21 3 2 665.36847 1329.72966 2.69 42.53 5104 5104 MS2 20/22 Linfeng_20130408_Smad2_2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.32 0.00 0 10 1 2 665.36890 1329.73052 3.33 42.40 5568 5568 MS2 20/22 Linfeng_20130408_Smad2_8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 236 4.32 0.00 0 9 1 2 665.36951 1329.73174 4.25 42.45 5533 5533 MS2 20/22 Linfeng_20130408_Smad2_5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 213 4.31 0.00 0 18 3 2 665.37012 1329.73296 5.16 42.54 6058 6058 MS2 20/22 Linfeng_20130405_rIgG8.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.31 0.00 0 12 1 2 665.36761 1329.72795 1.40 42.49 5312 5312 MS2 20/22 Linfeng_20130408_Smad2_3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 4.29 0.00 0 16 3 2 665.36896 1329.73064 3.42 42.40 5418 5418 MS2 20/22 Linfeng_20130408_Smad2_9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.27 0.00 0 25 1 2 665.36945 1329.73161 4.15 42.58 5882 5882 MS2 19/22 Linfeng_20130405_rIgG4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 212 4.25 0.00 0 25 3 2 665.37030 1329.73332 5.44 42.56 5867 5867 MS2 19/22 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 234 4.23 0.00 0 17 0 2 665.36865 1329.73003 2.96 42.56 5653 5653 MS2 20/22 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 15 1 2 665.36871 1329.73015 3.05 42.45 5159 5159 MS2 19/22 Linfeng_20130408_Smad2_6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 4.22 0.00 0 18 4 2 665.36884 1329.73039 3.24 42.34 4964 4964 MS2 19/22 Linfeng_20130408_Smad2_10.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 231 4.19 0.00 0 27 4 2 665.36908 1329.73088 3.60 42.42 5072 5072 MS2 19/22 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 12 2 2 665.37012 1329.73296 5.16 42.53 6004 6004 MS2 20/22 Linfeng_20130405_rIgG5.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 215 4.16 0.00 0 14 2 2 665.37012 1329.73296 5.16 42.59 5628 5628 MS2 19/22 Linfeng_20130405_rIgG6.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 232 4.13 0.00 0 33 1 2 665.36914 1329.73100 3.69 42.52 5619 5619 MS2 19/22 Linfeng_20130405_rIgG3.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 240 4.12 0.00 0 37 4 2 665.36969 1329.73210 4.52 42.42 5377 5377 MS2 19/22 Linfeng_20130408_Smad2_4.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 237 4.03 0.00 0 26 1 2 665.36890 1329.73052 3.33 42.56 5529 5529 MS2 19/22 Linfeng_20130405_rIgG7.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 244 3.99 0.00 0 34 1 2 665.36993 1329.73259 4.89 42.57 5509 5509 MS2 19/22 Linfeng_20130405_rIgG1.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 250 3.97 0.00 1 26 24 3 513.27490 1537.81015 3.77 38.44 4144 4144 MS2 22/44 Linfeng_20130405_rIgG2.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.95 0.00 0 40 3 2 665.36841 1329.72954 2.59 42.48 5417 5417 MS2 19/22 Linfeng_20130408_Smad2_1.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 170 3.89 0.00 0 5 18 2 632.35431 1263.70134 5.51 41.35 4591 4591 MS2 18/20 Linfeng_20130408_Smad2_10.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 242 3.88 0.00 1 17 28 3 507.94388 1521.81708 5.02 40.64 4747 4747 MS2 26/44 Linfeng_20130405_rIgG1.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 237 3.82 0.00 1 0 47 3 507.94302 1521.81452 3.34 40.64 5116 5116 MS2 22/44 Linfeng_20130405_rIgG9.raw High NLDLDSIIAEVK Unambiguous 13 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 233 3.77 0.00 0 20 5 2 665.36890 1329.73052 3.33 42.60 5408 5408 MS2 19/22 Linfeng_20130405_rIgG10.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 197 3.76 0.00 0 19 20 2 632.35242 1263.69756 2.51 41.55 4965 4965 MS2 18/20 Linfeng_20130408_Smad2_3.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 204 3.71 0.00 0 6 4 2 632.35388 1263.70049 4.83 41.63 5251 5251 MS2 18/20 Linfeng_20130405_rIgG3.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 228 3.71 0.00 1 42 33 3 507.94315 1521.81488 3.58 40.62 4765 4765 MS2 25/44 Linfeng_20130405_rIgG7.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.69 0.00 0 11 12 2 632.35291 1263.69853 3.29 41.51 4811 4811 MS2 18/20 Linfeng_20130408_Smad2_6.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 180 3.65 0.00 0 18 34 2 632.35278 1263.69829 3.09 41.59 4776 4776 MS2 18/20 Linfeng_20130408_Smad2_2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 211 3.59 0.00 0 17 38 2 632.35272 1263.69817 3.00 41.49 5035 5035 MS2 18/20 Linfeng_20130408_Smad2_4.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 220 3.54 0.00 0 15 36 2 632.35333 1263.69939 3.96 41.53 4752 4752 MS2 17/20 Linfeng_20130408_Smad2_7.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.53 0.00 1 30 22 3 507.94345 1521.81580 4.18 40.54 4846 4846 MS2 22/44 Linfeng_20130405_rIgG2.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 181 3.52 0.00 0 3 2 2 632.35370 1263.70012 4.54 41.63 5266 5266 MS2 18/20 Linfeng_20130405_rIgG2.raw High LLRDYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 230 3.45 0.00 1 17 24 3 507.94330 1521.81534 3.88 40.61 4856 4856 MS2 22/44 Linfeng_20130405_rIgG3.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 247 3.42 0.00 1 47 50 3 513.27570 1537.81253 5.32 38.33 3902 3902 MS2 17/44 Linfeng_20130408_Smad2_3.raw High YEELQVTAGK Unambiguous 1 1 Q5XKE5 CID 1.0000 0.0000 1 1 267 3.29 0.00 0 22 50 2 569.29669 1137.58611 6.54 36.68 3481 3481 MS2 16/18 Linfeng_20130408_Smad2_9.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 262 3.20 0.00 1 43 32 3 513.27454 1537.80906 3.06 38.50 4133 4133 MS2 18/44 Linfeng_20130405_rIgG3.raw High LLRDYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M9(Oxidation) CID 1.0000 0.0000 1 1 257 3.14 0.00 1 23 39 3 513.27478 1537.80979 3.53 38.51 4059 4059 MS2 22/44 Linfeng_20130405_rIgG7.raw High DYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 161 3.13 0.00 0 41 5 2 570.27631 1139.54534 4.52 40.07 4550 4550 MS2 13/16 Linfeng_20130405_rIgG1.raw High GGPVSAGTSILR Unambiguous 1 1 Q5XKE5 CID 1.0000 0.0000 1 1 271 3.02 0.00 0 52 50 2 557.81830 1114.62932 6.96 38.22 3972 3972 MS2 17/22 Linfeng_20130408_Smad2_9.raw High DYQELMNVK Unambiguous 5 2 P35908;Q5XKE5 CID 1.0000 0.0000 1 1 185 3.02 0.00 0 42 8 2 570.27582 1139.54436 3.67 40.04 4656 4656 MS2 14/16 Linfeng_20130405_rIgG3.raw High LALDVEIATYR Unambiguous 15 5 P35908;P13647;P02538;P04259;Q5XKE5 CID 1.0000 0.0000 1 1 184 2.99 0.00 0 16 20 2 632.35297 1263.69866 3.38 41.61 5077 5077 MS2 17/20 Linfeng_20130408_Smad2_1.raw High AQYELIAQR Unambiguous 1 1 Q5XKE5 CID 1.0000 0.0000 1 1 256 2.82 0.00 0 43 50 2 546.30066 1091.59404 8.81 37.91 3868 3868 MS2 13/16 Linfeng_20130408_Smad2_9.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 119 2.65 0.00 0 19 50 2 578.27423 1155.54119 5.27 36.97 3592 3592 MS2 14/16 Linfeng_20130408_Smad2_1.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 143 2.60 0.00 0 13 50 2 578.27515 1155.54302 6.85 37.00 3366 3366 MS2 13/16 Linfeng_20130408_Smad2_2.raw High DYQELmNVK Unambiguous 5 2 P35908;Q5XKE5 M6(Oxidation) CID 1.0000 0.0000 1 1 140 2.56 0.00 0 17 50 2 578.27515 1155.54302 6.85 36.89 3495 3495 MS2 13/16 Linfeng_20130408_Smad2_3.raw E9PDB2 "Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=3 SV=1 - [E9PDB2_HUMAN]" 11.82 2 2 2 2 8.02 11.82 2 2 296 30.9 8.43 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VAVLGASGGIGQPLSLLLK Unambiguous 2 1 E9PDB2 CID 1.0000 0.0000 1 1 9 4.93 0.00 0 11 50 2 897.05402 1793.10076 6.22 42.69 5478 5478 MS2 23/36 Linfeng_20130408_Smad2_4.raw High AGAGSATLSmAYAGAR Unambiguous 2 1 E9PDB2 M10(Oxidation) CID 1.0000 0.0000 1 1 200 3.10 0.00 0 25 50 2 735.85925 1470.71123 7.20 36.62 3464 3464 MS2 17/30 Linfeng_20130408_Smad2_9.raw B4DE78 "14-3-3 protein gamma, N-terminally processed OS=Homo sapiens GN=YWHAG PE=2 SV=1 - [B4DE78_HUMAN]" 11.59 3 1 2 4 11.84 11.59 2 4 207 23.5 4.82 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NVTELNEPLSNEER Unambiguous 3 1 B4DE78 CID 1.0000 0.0000 1 1 158 3.43 0.00 0 15 50 2 822.40466 1643.80205 9.04 38.04 3907 3907 MS2 16/26 Linfeng_20130408_Smad2_4.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 163 3.27 0.00 0 8 38 2 595.33685 1189.66643 4.58 42.72 5535 5535 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DSTLImQLLR Unambiguous 6 3 B4DE78;P27348;P63104 M6(Oxidation) CID 1.0000 0.0000 1 1 237 2.59 0.00 0 8 50 2 603.33417 1205.66106 4.28 42.42 5426 5426 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 202 2.55 0.00 0 11 49 2 595.33801 1189.66875 6.53 42.78 5509 5509 MS2 15/18 Linfeng_20130408_Smad2_4.raw P04040 Catalase OS=Homo sapiens GN=CAT PE=1 SV=3 - [CATA_HUMAN] 11.39 1 5 5 8 23.24 11.39 5 8 527 59.7 7.39 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADVLTTGAGNPVGDK Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 245 3.89 0.00 0 22 50 2 707.86774 1414.72820 7.68 37.15 3654 3654 MS2 22/28 Linfeng_20130408_Smad2_4.raw High FNTANDDNVTQVR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 191 2.97 0.00 0 14 50 2 747.35870 1493.71013 8.14 36.07 3240 3240 MS2 14/24 Linfeng_20130408_Smad2_3.raw High FNTANDDNVTQVR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 181 2.95 0.00 0 12 50 2 747.35779 1493.70830 6.91 35.94 3271 3271 MS2 16/24 Linfeng_20130408_Smad2_4.raw High FNTANDDNVTQVR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 194 2.81 0.00 0 14 50 2 747.35840 1493.70952 7.73 36.19 3110 3110 MS2 12/24 Linfeng_20130408_Smad2_2.raw High LNVITVGPR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 97 2.76 0.00 0 30 50 2 484.80212 968.59697 8.45 39.02 4220 4220 MS2 14/16 Linfeng_20130408_Smad2_4.raw High FSTVAGESGSADTVR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 172 2.72 0.00 0 21 50 2 742.36151 1483.71575 8.99 35.97 3281 3281 MS2 20/28 Linfeng_20130408_Smad2_4.raw High DAQIFIQK Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 273 2.61 0.00 0 20 50 2 481.77209 962.53691 6.56 38.61 4092 4092 MS2 12/14 Linfeng_20130408_Smad2_4.raw High LNVITVGPR Unambiguous 1 1 P04040 CID 1.0000 0.0000 1 1 93 2.54 0.00 0 48 50 2 484.80026 968.59325 4.60 38.88 4195 4195 MS2 13/16 Linfeng_20130408_Smad2_9.raw P24752 "Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens GN=ACAT1 PE=1 SV=1 - [THIL_HUMAN]" 11.24 3 3 3 3 11.14 11.24 3 3 427 45.2 8.85 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPIGSFLGSLSLLPATK Unambiguous 3 1 P24752 CID 1.0000 0.0000 1 1 76 4.47 0.00 0 37 50 2 851.49725 1701.98723 5.05 42.97 5573 5573 MS2 24/32 Linfeng_20130408_Smad2_4.raw High FGNEVIPVTVTVK Unambiguous 1 1 P24752 CID 1.0000 0.0000 1 1 139 3.37 0.00 0 49 50 2 701.90765 1402.80803 9.92 40.97 4854 4854 MS2 17/24 Linfeng_20130408_Smad2_4.raw High EAYmGNVLQGGEGQAPTR Unambiguous 3 1 P24752 M4(Oxidation) CID 1.0000 0.0000 1 1 142 3.29 0.00 0 0 50 2 947.45001 1893.89275 8.82 37.00 3606 3606 MS2 21/34 Linfeng_20130408_Smad2_4.raw Q08211 ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4 - [DHX9_HUMAN] 11.10 3 10 10 13 35.76 11.10 10 10 8.87 2.99 3 3 1270 140.9 6.84 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AENNSEVGASGYGVPGPTWDR Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 89 4.42 0.00 0 3 47 2 1081.99585 2162.98442 4.89 40.12 4687 4687 MS2 21/40 Linfeng_20130405_rIgG3.raw High LAAQScALSLVR Unambiguous 2 1 Q08211 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 3.87 0.00 0 22 31 2 644.85803 1288.70879 3.52 40.18 4707 4707 MS2 19/22 Linfeng_20130405_rIgG3.raw High TTQVPQFILDDFIQNDR Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 248 3.86 0.00 0 15 26 2 1025.52087 2050.03447 5.07 42.66 5674 5674 MS2 20/32 Linfeng_20130405_rIgG3.raw High LQISHEAAAcITGLR Unambiguous 2 1 Q08211 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 3.65 0.00 0 32 50 3 547.29266 1639.86344 3.00 39.46 4467 4467 MS2 28/56 Linfeng_20130405_rIgG3.raw High PSAAGINLmIGSTR Unambiguous 2 1 Q08211 M9(Oxidation) CID 1.0000 0.0000 1 1 230 3.45 0.00 0 42 50 2 702.37231 1403.73735 4.38 40.09 4677 4677 MS2 19/26 Linfeng_20130405_rIgG3.raw High GmTLVTPLQLLLFASK Unambiguous 2 1 Q08211 M2(Oxidation) CID 1.0000 0.0000 1 1 55 3.37 0.00 0 6 50 2 874.51245 1748.01763 8.51 43.50 5949 5949 MS2 21/30 Linfeng_20130405_rIgG3.raw High DVVQAYPEVR Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 279 3.36 0.00 0 0 27 2 588.30713 1175.60698 1.21 38.08 3986 3986 MS2 17/18 Linfeng_20130405_rIgG3.raw High TPLHEIALSIK Unambiguous 1 1 Q08211 CID 1.0000 0.0000 1 1 63 3.30 0.00 0 15 50 3 407.91348 1221.72589 4.66 40.16 4699 4699 MS2 23/40 Linfeng_20130405_rIgG3.raw High DINTDFLLVVLR Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 137 3.28 0.00 0 21 50 2 709.41119 1417.81511 7.12 43.50 5948 5948 MS2 17/22 Linfeng_20130405_rIgG3.raw High GmTLVTPLQLLLFASK Unambiguous 2 1 Q08211 M2(Oxidation) CID 1.0000 0.0000 1 1 55 3.25 0.00 0 9 50 2 874.51129 1748.01531 7.19 43.45 5397 5397 MS2 19/30 Linfeng_20130408_Smad2_2.raw High GISHVIVDEIHER Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 272 3.20 0.00 0 42 50 3 501.93756 1503.79813 4.42 39.10 4339 4339 MS2 25/48 Linfeng_20130405_rIgG3.raw High DVVQAYPEVR Unambiguous 2 1 Q08211 CID 1.0000 0.0000 1 1 310 3.02 0.00 0 51 50 2 588.30627 1175.60527 -0.25 38.08 3640 3640 MS2 16/18 Linfeng_20130408_Smad2_2.raw High LAAQScALSLVR Unambiguous 2 1 Q08211 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.60 0.00 0 65 50 2 644.85907 1288.71086 5.14 40.10 4284 4284 MS2 14/22 Linfeng_20130408_Smad2_2.raw O14979-3 Isoform 3 of Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens GN=HNRPDL - [HNRDL_HUMAN] 10.66 3 1 2 2 0.00 5.96 10.66 2 2 244 27.2 8.65 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFVGGLSPDTSEEQIK Unambiguous 3 1 O14979-3 CID 1.0000 0.0000 1 1 273 3.16 0.00 0 15 50 2 853.44385 1705.88042 9.40 40.10 4270 4270 MS2 13/30 Linfeng_20130408_Smad2_7.raw High FGEVVDcTIK Unambiguous 13 2 O14979-3;D6RF44 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 2.79 0.00 0 10 50 2 584.29413 1167.58098 8.12 38.70 3903 3903 MS2 14/18 Linfeng_20130408_Smad2_6.raw Q7Z4W1 L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2 - [DCXR_HUMAN] 10.66 1 2 2 2 5.30 10.66 2 2 244 25.9 8.10 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQADLDSLVR Unambiguous 1 1 Q7Z4W1 CID 1.0000 0.0000 1 1 291 2.74 0.00 0 23 50 2 559.29944 1117.59160 6.06 39.36 4334 4334 MS2 17/18 Linfeng_20130408_Smad2_4.raw High GVPGAIVNVSSQcSQR Unambiguous 1 1 Q7Z4W1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.56 0.00 0 24 50 2 829.92474 1658.84221 8.59 37.99 3893 3893 MS2 17/30 Linfeng_20130408_Smad2_4.raw B4E1K7 Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=2 SV=1 - [B4E1K7_HUMAN] 10.29 2 2 2 3 12.05 10.29 2 3 311 33.3 8.25 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AEQINQAAGEASAVLAK Unambiguous 2 1 B4E1K7 CID 1.0000 0.0000 1 1 265 4.71 0.00 0 7 50 2 835.94366 1670.88005 5.49 39.64 4516 4516 MS2 23/32 Linfeng_20130405_rIgG6.raw High AEQINQAAGEASAVLAK Unambiguous 2 1 B4E1K7 CID 1.0000 0.0000 1 1 263 4.33 0.00 0 10 50 2 835.94427 1670.88127 6.22 39.57 4418 4418 MS2 25/32 Linfeng_20130405_rIgG7.raw High ILEPGLNILIPVLDR Unambiguous 2 1 B4E1K7 CID 1.0000 0.0000 1 1 13 3.02 0.00 0 9 50 2 838.01453 1675.02178 3.83 43.14 5739 5739 MS2 21/28 Linfeng_20130405_rIgG7.raw P07900 Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5 - [HS90A_HUMAN] 10.25 6 6 6 6 21.77 10.25 6 6 732 84.6 5.02 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NPDDITNEEYGEFYK Unambiguous 3 1 P07900 CID 1.0000 0.0000 1 1 71 4.55 0.00 0 29 50 2 917.40210 1833.79692 8.45 40.14 4585 4585 MS2 21/28 Linfeng_20130408_Smad2_4.raw High GVVDSEDLPLNISR Unambiguous 4 1 P07900 CID 1.0000 0.0000 1 2 208 4.24 0.00 0 21 26 2 757.40106 1513.79485 6.02 40.98 4899 4899 MS2 21/26 Linfeng_20130408_Smad2_9.raw High TLTIVDTGIGmTK Unambiguous 4 1 P07900 M11(Oxidation) CID 1.0000 0.0000 1 2 219 3.74 0.00 0 47 50 2 683.37347 1365.73967 7.47 39.89 4532 4532 MS2 19/24 Linfeng_20130408_Smad2_9.raw High ADLINNLGTIAK Unambiguous 5 1 P07900 CID 1.0000 0.0000 1 1 193 3.73 0.00 0 17 21 2 621.85974 1242.71221 5.56 40.98 4898 4898 MS2 20/22 Linfeng_20130408_Smad2_9.raw High ELISNSSDALDK Unambiguous 4 1 P07900 CID 1.0000 0.0000 1 1 248 2.77 0.00 0 14 50 2 646.32434 1291.64141 2.90 37.28 3669 3669 MS2 13/22 Linfeng_20130408_Smad2_9.raw High YIDQEELNK Unambiguous 6 1 P07900 CID 1.0000 0.0000 1 1 224 2.74 0.00 0 25 50 2 576.28583 1151.56438 5.60 35.55 3110 3110 MS2 14/16 Linfeng_20130408_Smad2_9.raw P10809 "60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2 - [CH60_HUMAN]" 10.12 3 4 4 4 12.50 10.12 4 4 573 61.0 5.87 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALMLQGVDLLADAVAVTmGPK Unambiguous 3 1 P10809 M18(Oxidation) CID 1.0000 0.0000 1 1 174 3.70 0.00 0 23 50 3 710.38672 2129.14560 5.16 43.24 5655 5655 MS2 26/80 Linfeng_20130408_Smad2_4.raw High VGGTSDVEVNEK Unambiguous 1 1 P10809 CID 1.0000 0.0000 1 1 216 3.33 0.00 0 22 50 2 617.30731 1233.60735 9.36 33.68 2586 2586 MS2 17/22 Linfeng_20130408_Smad2_4.raw High NAGVEGSLIVEK Unambiguous 1 1 P10809 CID 1.0000 0.0000 1 1 252 2.94 0.00 0 13 50 2 608.33752 1215.66777 8.03 38.15 3947 3947 MS2 17/22 Linfeng_20130408_Smad2_9.raw High TLNDELEIIEGMK Unambiguous 3 1 P10809 CID 1.0000 0.0000 1 1 270 2.53 0.00 0 27 50 2 752.88562 1504.76396 5.01 42.17 5290 5290 MS2 17/24 Linfeng_20130408_Smad2_4.raw F5H8J6 Uncharacterized protein OS=Homo sapiens GN=HMGCS2 PE=4 SV=1 - [F5H8J6_HUMAN] 9.96 2 1 2 3 9.27 9.96 2 3 261 28.6 6.06 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High PTGGAGAVAmLIGPK Unambiguous 2 1 F5H8J6 M10(Oxidation) CID 1.0000 0.0000 1 1 188 3.38 0.00 0 57 50 2 678.37787 1355.74846 9.75 40.36 4653 4653 MS2 17/28 Linfeng_20130408_Smad2_4.raw High LEVGTETIIDK Unambiguous 4 2 Q8N995;F5H8J6 CID 1.0000 0.0000 1 1 245 3.07 0.00 0 45 50 2 609.33875 1217.67021 6.40 39.15 4283 4283 MS2 16/20 Linfeng_20130408_Smad2_9.raw High LEVGTETIIDK Unambiguous 4 2 Q8N995;F5H8J6 CID 1.0000 0.0000 1 1 233 2.82 0.00 0 72 50 2 609.33856 1217.66985 6.10 39.26 4298 4298 MS2 14/20 Linfeng_20130408_Smad2_4.raw A8MUB1 Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=2 SV=1 - [A8MUB1_HUMAN] 9.93 2 2 3 4 13.73 9.93 3 4 433 48.3 5.01 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGINYQPPTVVPGGDLAK Unambiguous 12 2 E9PGK3;A8MUB1 CID 1.0000 0.0000 1 1 146 4.17 0.00 0 12 32 2 913.00354 1824.99980 7.83 40.56 4758 4758 MS2 24/34 Linfeng_20130408_Smad2_9.raw High VGINYQPPTVVPGGDLAK Unambiguous 12 2 E9PGK3;A8MUB1 CID 1.0000 0.0000 1 1 152 3.35 0.00 0 40 48 2 913.00317 1824.99907 7.43 40.72 4773 4773 MS2 17/34 Linfeng_20130408_Smad2_4.raw High AVFVDLEPTVIDEIR Unambiguous 2 1 A8MUB1 CID 1.0000 0.0000 1 1 227 3.29 0.00 0 11 50 2 858.46790 1715.92851 4.08 42.31 5387 5387 MS2 20/28 Linfeng_20130408_Smad2_9.raw High DVNAAIAAIK Unambiguous 2 1 A8MUB1 CID 1.0000 0.0000 1 1 275 2.92 0.00 0 29 50 2 493.29031 985.57335 5.70 39.81 4503 4503 MS2 17/18 Linfeng_20130408_Smad2_9.raw P42765 "3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2 - [THIM_HUMAN]" 9.82 1 3 3 3 11.10 9.82 3 3 397 41.9 8.09 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AANDAGYFNDEmAPIEVK Unambiguous 1 1 P42765 M12(Oxidation) CID 1.0000 0.0000 1 1 105 5.00 0.00 0 0 50 2 985.95160 1970.89592 8.01 39.93 4516 4516 MS2 22/34 Linfeng_20130408_Smad2_4.raw High PQTTLEQLQK Unambiguous 1 1 P42765 CID 1.0000 0.0000 1 1 195 3.13 0.00 0 31 50 2 593.33234 1185.65740 8.41 36.66 3496 3496 MS2 16/18 Linfeng_20130408_Smad2_4.raw High TPFGAYGGLLK Unambiguous 1 1 P42765 CID 1.0000 0.0000 1 1 202 2.97 0.00 0 51 31 2 562.31323 1123.61919 4.02 41.41 5006 5006 MS2 15/20 Linfeng_20130408_Smad2_4.raw P14923 Junction plakoglobin OS=Homo sapiens GN=JUP PE=1 SV=3 - [PLAK_HUMAN] 9.80 5 6 6 10 0.00 31.80 9.80 6 10 745 81.7 6.14 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLNDEDPVVVTK Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 178 3.80 0.00 0 18 50 2 671.37292 1341.73857 9.30 38.79 3927 3927 MS2 16/22 Linfeng_20130408_Smad2_6.raw High LLNDEDPVVVTK Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 209 3.78 0.00 0 4 50 2 671.37152 1341.73577 7.21 38.63 4109 4109 MS2 18/22 Linfeng_20130408_Smad2_9.raw High LLNDEDPVVVTK Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 202 3.55 0.00 0 29 50 2 671.37146 1341.73564 7.12 38.79 3865 3865 MS2 15/22 Linfeng_20130408_Smad2_7.raw High SAIVHLINYQDDAELATR Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 241 3.47 0.00 0 32 50 3 677.02142 2029.04972 7.27 40.66 4793 4793 MS2 25/68 Linfeng_20130408_Smad2_9.raw High LLNDEDPVVVTK Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 213 3.12 0.00 0 60 50 2 671.37195 1341.73662 7.85 38.86 4074 4074 MS2 16/22 Linfeng_20130408_Smad2_3.raw High LLNQPNQWPLVK Unambiguous 1 1 P14923 CID 1.0000 0.0000 1 1 140 3.10 0.00 0 8 44 2 725.41754 1449.82781 4.47 41.26 4999 4999 MS2 17/22 Linfeng_20130408_Smad2_9.raw High TmQNTSDLDTAR Unambiguous 6 1 P14923 M2(Oxidation) CID 1.0000 0.0000 1 1 103 2.91 0.00 0 30 50 2 684.81250 1368.61772 8.53 33.30 2476 2476 MS2 17/22 Linfeng_20130408_Smad2_3.raw High LNYGIPAIVK Unambiguous 1 1 P14923 CID 1.0000 0.0000 1 1 167 2.85 0.00 0 39 50 2 544.33252 1087.65776 6.17 41.00 4906 4906 MS2 14/18 Linfeng_20130408_Smad2_9.raw High TMQNTSDLDTAR Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 129 2.61 0.00 0 0 50 2 676.81445 1352.62163 7.76 34.52 2780 2780 MS2 18/22 Linfeng_20130408_Smad2_9.raw High LAEPSQLLK Unambiguous 6 1 P14923 CID 1.0000 0.0000 1 1 138 2.59 0.00 0 43 50 2 499.80011 998.59294 4.83 38.95 4217 4217 MS2 13/16 Linfeng_20130408_Smad2_9.raw P27348 14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1 - [1433T_HUMAN] 9.80 1 1 2 4 12.20 9.80 2 4 245 27.7 4.78 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AVTEQGAELSNEER Unambiguous 1 1 P27348 CID 1.0000 0.0000 1 1 193 3.79 0.00 0 2 50 2 766.86908 1532.73088 7.90 34.83 2881 2881 MS2 22/26 Linfeng_20130408_Smad2_9.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 163 3.27 0.00 0 8 38 2 595.33685 1189.66643 4.58 42.72 5535 5535 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DSTLImQLLR Unambiguous 6 3 B4DE78;P27348;P63104 M6(Oxidation) CID 1.0000 0.0000 1 1 237 2.59 0.00 0 8 50 2 603.33417 1205.66106 4.28 42.42 5426 5426 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 202 2.55 0.00 0 11 49 2 595.33801 1189.66875 6.53 42.78 5509 5509 MS2 15/18 Linfeng_20130408_Smad2_4.raw P63104 14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1 - [1433Z_HUMAN] 9.80 2 1 2 6 18.72 9.80 2 6 245 27.7 4.79 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SVTEQGAELSNEER Unambiguous 2 1 P63104 CID 1.0000 0.0000 1 1 156 4.20 0.00 0 0 50 2 774.86621 1548.72515 7.40 35.04 2951 2951 MS2 21/26 Linfeng_20130408_Smad2_9.raw High SVTEQGAELSNEER Unambiguous 2 1 P63104 CID 1.0000 0.0000 1 1 153 3.56 0.00 0 30 50 2 774.86658 1548.72588 7.87 35.07 3136 3136 MS2 19/26 Linfeng_20130408_Smad2_8.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 163 3.27 0.00 0 8 38 2 595.33685 1189.66643 4.58 42.72 5535 5535 MS2 17/18 Linfeng_20130408_Smad2_9.raw High DSTLImQLLR Unambiguous 6 3 B4DE78;P27348;P63104 M6(Oxidation) CID 1.0000 0.0000 1 1 237 2.59 0.00 0 8 50 2 603.33417 1205.66106 4.28 42.42 5426 5426 MS2 17/18 Linfeng_20130408_Smad2_9.raw High SVTEQGAELSNEER Unambiguous 2 1 P63104 CID 1.0000 0.0000 1 1 163 2.56 0.00 0 27 50 2 774.86774 1548.72820 9.37 35.23 3060 3060 MS2 15/26 Linfeng_20130408_Smad2_4.raw High DSTLIMQLLR Unambiguous 6 3 B4DE78;P27348;P63104 CID 1.0000 0.0000 1 1 202 2.55 0.00 0 11 49 2 595.33801 1189.66875 6.53 42.78 5509 5509 MS2 15/18 Linfeng_20130408_Smad2_4.raw B4DYB4 Nucleoporin NUP53 OS=Homo sapiens GN=NUP35 PE=2 SV=1 - [B4DYB4_HUMAN] 9.71 2 2 2 2 6.15 9.71 2 2 309 33.1 9.36 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SPLLAGGSPPQPVVPAHK Unambiguous 2 1 B4DYB4 CID 1.0000 0.0000 1 1 108 3.59 0.00 0 19 50 3 584.67017 1751.99594 8.89 38.19 3740 3740 MS2 29/68 Linfeng_20130408_Smad2_6.raw High ASTSDYQVISDR Unambiguous 2 1 B4DYB4 CID 1.0000 0.0000 1 1 172 2.56 0.00 0 23 50 2 671.32336 1341.63945 8.43 36.87 3378 3378 MS2 15/22 Linfeng_20130408_Smad2_6.raw D6R9P3 Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens GN=HNRNPAB PE=4 SV=1 - [D6R9P3_HUMAN] 9.64 5 2 2 2 7.64 9.64 2 2 0.00 280 30.3 7.91 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EVYQQQQYGSGGR Unambiguous 5 1 D6R9P3 CID 1.0000 0.0000 1 1 136 4.00 0.00 0 13 50 2 750.35217 1499.69707 6.46 34.11 2722 2722 MS2 20/24 Linfeng_20130405_rIgG7.raw High IFVGGLNPEATEEK Unambiguous 5 1 D6R9P3 CID 1.0000 0.0000 1 1 259 3.64 0.00 0 14 33 2 752.39154 1503.77580 4.50 40.34 4669 4669 MS2 21/26 Linfeng_20130405_rIgG7.raw P16403 Histone H1.2 OS=Homo sapiens GN=HIST1H1C PE=1 SV=2 - [H12_HUMAN] 9.39 3 2 2 6 16.15 9.39 2 6 213 21.4 10.93 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALAAAGYDVEK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 256 2.87 0.00 0 30 50 2 554.29169 1107.57610 7.20 36.53 3431 3431 MS2 18/20 Linfeng_20130408_Smad2_9.raw High ALAAAGYDVEK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 268 2.74 0.00 0 27 50 2 554.29114 1107.57500 6.21 36.81 3538 3538 MS2 18/20 Linfeng_20130408_Smad2_1.raw High SGVSLAALK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 281 2.66 0.00 0 36 50 2 423.26059 845.51390 5.63 38.75 4150 4150 MS2 15/16 Linfeng_20130408_Smad2_9.raw High ALAAAGYDVEK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 284 2.65 0.00 0 37 50 2 554.29156 1107.57585 6.98 36.81 3470 3470 MS2 15/20 Linfeng_20130408_Smad2_3.raw High SGVSLAALK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 260 2.62 0.00 0 52 50 2 423.26071 845.51415 5.92 39.11 3969 3969 MS2 14/16 Linfeng_20130408_Smad2_2.raw High SGVSLAALK Unambiguous 3 1 P16403 CID 1.0000 0.0000 1 1 258 2.61 0.00 0 40 50 2 423.26065 845.51402 5.78 38.89 3897 3897 MS2 14/16 Linfeng_20130408_Smad2_7.raw B4DDF9 Annexin OS=Homo sapiens GN=ANXA4 PE=2 SV=1 - [B4DDF9_HUMAN] 9.28 3 2 2 2 5.41 9.28 2 2 237 27.0 6.06 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISQTYQQQYGR Unambiguous 3 1 B4DDF9 CID 1.0000 0.0000 1 1 150 2.75 0.00 0 27 50 2 686.34180 1371.67632 8.13 34.41 2743 2743 MS2 16/20 Linfeng_20130408_Smad2_9.raw High GLGTDDNTLIR Unambiguous 3 1 B4DDF9 CID 1.0000 0.0000 1 1 253 2.66 0.00 0 34 50 2 587.81012 1174.61296 5.67 38.49 4064 4064 MS2 15/20 Linfeng_20130408_Smad2_9.raw Q00796 Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4 - [DHSO_HUMAN] 9.24 1 2 2 2 6.05 9.24 2 2 357 38.3 7.97 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LENYPIPEPGPNEVLLR Unambiguous 1 1 Q00796 CID 1.0000 0.0000 1 1 176 3.47 0.00 0 7 50 2 975.52753 1950.04778 7.48 41.59 5073 5073 MS2 16/32 Linfeng_20130408_Smad2_4.raw High AmGAAQVVVTDLSATR Unambiguous 1 1 Q00796 M2(Oxidation) CID 1.0000 0.0000 1 1 274 2.58 0.00 0 19 50 2 803.42365 1605.84001 8.37 40.49 4696 4696 MS2 23/30 Linfeng_20130408_Smad2_4.raw P00505 "Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=3 - [AATM_HUMAN]" 9.07 2 3 3 3 11.04 9.07 3 3 430 47.5 9.01 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FVTVQTISGTGALR Unambiguous 2 1 P00505 CID 1.0000 0.0000 1 1 181 4.63 0.00 0 16 50 2 725.41302 1449.81877 8.76 40.45 4684 4684 MS2 23/26 Linfeng_20130408_Smad2_4.raw High ASAELALGENSEVLK Unambiguous 1 1 P00505 CID 1.0000 0.0000 1 1 246 3.57 0.00 0 7 50 2 765.90979 1530.81230 7.34 39.86 4493 4493 MS2 20/28 Linfeng_20130408_Smad2_4.raw High DAGmQLQGYR Unambiguous 2 1 P00505 M4(Oxidation) CID 1.0000 0.0000 1 1 129 2.84 0.00 0 57 50 2 577.77118 1154.53508 7.92 35.65 3180 3180 MS2 16/18 Linfeng_20130408_Smad2_4.raw C9JKR2 "Albumin, isoform CRA_k OS=Homo sapiens GN=ALB PE=4 SV=1 - [C9JKR2_HUMAN]" 8.87 9 3 3 5 18.83 8.87 3 5 0.00 417 47.3 6.35 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RHPDYSVVLLLR Unambiguous 8 1 C9JKR2 CID 1.0000 0.0000 1 1 85 4.58 0.00 1 8 4 3 489.95486 1467.85004 4.72 41.26 5340 5340 MS2 29/44 Linfeng_20130405_rIgG4.raw High RHPDYSVVLLLR Unambiguous 8 1 C9JKR2 CID 1.0000 0.0000 1 1 81 4.19 0.00 1 21 8 3 489.95563 1467.85233 6.28 41.26 5098 5098 MS2 30/44 Linfeng_20130405_rIgG3.raw High KQTALVELVK Unambiguous 9 1 C9JKR2 CID 1.0000 0.0000 1 1 97 3.52 0.00 1 31 23 3 376.90616 1128.70392 4.59 38.56 4153 4153 MS2 23/36 Linfeng_20130405_rIgG3.raw High KVPQVSTPTLVEVSR Unambiguous 9 1 C9JKR2 CID 1.0000 0.0000 1 1 80 3.31 0.00 1 39 50 3 547.31976 1639.94474 4.22 39.07 4211 4211 MS2 25/56 Linfeng_20130405_rIgG1.raw High KVPQVSTPTLVEVSR Unambiguous 9 1 C9JKR2 CID 1.0000 0.0000 1 1 88 3.23 0.00 1 24 23 3 547.31952 1639.94400 3.77 38.97 4327 4327 MS2 28/56 Linfeng_20130405_rIgG2.raw Q6KB66-2 "Isoform 2 of Keratin, type II cytoskeletal 80 OS=Homo sapiens GN=KRT80 - [K2C80_HUMAN]" 8.77 3 2 3 10 0.00 38.46 8.77 3 10 422 47.2 5.30 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 150 4.28 0.00 0 14 17 2 639.36432 1277.72136 8.87 41.96 5117 5117 MS2 18/20 Linfeng_20130408_Smad2_3.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 147 4.28 0.00 0 48 20 2 639.36133 1277.71538 4.19 41.84 5215 5215 MS2 18/20 Linfeng_20130408_Smad2_9.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 144 4.20 0.00 0 16 3 2 639.36102 1277.71477 3.71 41.89 4952 4952 MS2 18/20 Linfeng_20130408_Smad2_6.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 143 4.19 0.00 0 40 5 2 639.36121 1277.71514 3.99 41.89 5184 5184 MS2 18/20 Linfeng_20130408_Smad2_4.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 135 4.08 0.00 0 19 10 2 639.36212 1277.71697 5.43 41.98 4912 4912 MS2 18/20 Linfeng_20130408_Smad2_2.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 149 3.89 0.00 0 29 7 2 639.36072 1277.71416 3.23 42.00 5225 5225 MS2 18/20 Linfeng_20130408_Smad2_1.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 135 3.85 0.00 0 20 3 2 639.36127 1277.71526 4.09 41.75 4743 4743 MS2 18/20 Linfeng_20130408_Smad2_10.raw High LALDIEIATYR Unambiguous 7 3 P04264;F5H8K9;Q6KB66-2 CID 1.0000 0.0000 1 2 147 3.84 0.00 0 43 7 2 639.36188 1277.71648 5.05 41.92 4889 4889 MS2 18/20 Linfeng_20130408_Smad2_7.raw High VTVNPGLLVPLDVK Unambiguous 2 1 Q6KB66-2 CID 1.0000 0.0000 1 1 18 3.05 0.00 0 15 50 2 732.44830 1463.88933 4.14 41.99 5273 5273 MS2 18/26 Linfeng_20130408_Smad2_9.raw High LAQLEAALQQAK Unambiguous 3 1 Q6KB66-2 CID 1.0000 0.0000 1 1 136 2.81 0.00 0 45 50 2 642.37299 1283.73870 5.34 40.05 4462 4462 MS2 15/22 Linfeng_20130408_Smad2_3.raw B4DKM5 Voltage-dependent anion-selective channel protein 2 OS=Homo sapiens GN=VDAC2 PE=2 SV=1 - [B4DKM5_HUMAN] 8.63 4 2 2 2 5.67 8.63 2 2 255 27.5 5.47 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LTLSALVDGK Unambiguous 4 1 B4DKM5 CID 1.0000 0.0000 1 1 176 2.93 0.00 0 9 29 2 508.80505 1016.60283 4.07 41.34 5030 5030 MS2 15/18 Linfeng_20130408_Smad2_9.raw High YQLDPTASISAK Unambiguous 4 1 B4DKM5 CID 1.0000 0.0000 1 1 279 2.74 0.00 0 17 50 2 647.34253 1293.67778 7.14 38.64 4112 4112 MS2 16/22 Linfeng_20130408_Smad2_9.raw Q15323 "Keratin, type I cuticular Ha1 OS=Homo sapiens GN=KRT31 PE=2 SV=3 - [K1H1_HUMAN]" 8.41 2 3 3 3 10.28 8.41 3 3 416 47.2 4.88 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LNVEVDAAPTVDLNR Unambiguous 1 1 Q15323 CID 1.0000 0.0000 1 1 237 4.27 0.00 0 17 39 2 813.43304 1625.85881 5.78 40.42 4789 4789 MS2 22/28 Linfeng_20130405_rIgG6.raw High LEcEINTYR Unambiguous 2 1 Q15323 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 161 3.01 0.00 0 9 41 2 599.28308 1197.55889 1.67 36.75 3579 3579 MS2 15/16 Linfeng_20130405_rIgG6.raw High SQYEALVETNR Unambiguous 2 1 Q15323 CID 1.0000 0.0000 1 1 201 3.01 0.00 0 26 50 2 655.32355 1309.63982 1.15 37.73 3822 3822 MS2 17/20 Linfeng_20130405_rIgG7.raw P05141 ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=7 - [ADT2_HUMAN] 8.39 1 2 2 2 6.87 8.39 2 2 0.00 298 32.8 9.69 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFLAGGVAAAISK Unambiguous 1 1 P05141 CID 1.0000 0.0000 1 1 214 3.75 0.00 0 24 10 2 610.34039 1219.67351 4.36 41.78 5736 5736 MS2 22/24 Linfeng_20130405_rIgG8.raw High YFPTQALNFAFK Unambiguous 1 1 P05141 CID 1.0000 0.0000 1 1 230 3.12 0.00 0 2 9 2 723.87952 1446.75176 6.98 42.36 5983 5983 MS2 20/22 Linfeng_20130405_rIgG8.raw Q86Y46 "Keratin, type II cytoskeletal 73 OS=Homo sapiens GN=KRT73 PE=1 SV=1 - [K2C73_HUMAN]" 8.33 9 1 6 26 0.00 89.41 8.33 6 26 540 58.9 7.23 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 290 4.33 0.00 0 40 50 2 738.89148 1476.77568 4.29 38.20 3677 3677 MS2 20/22 Linfeng_20130408_Smad2_7.raw High NLDLDSIIAEVR Unambiguous 6 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 252 4.24 0.00 0 20 7 2 679.37238 1357.73747 3.85 42.47 5593 5593 MS2 19/22 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 284 4.17 0.00 0 27 50 2 738.89124 1476.77519 3.96 38.04 3912 3912 MS2 20/22 Linfeng_20130408_Smad2_9.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 296 4.16 0.00 0 60 40 2 738.88916 1476.77104 1.15 38.16 4026 4026 MS2 20/22 Linfeng_20130408_Smad2_5.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 287 4.03 0.00 0 7 49 2 738.89307 1476.77886 6.44 38.24 3756 3756 MS2 19/22 Linfeng_20130408_Smad2_6.raw High SKAEAEALYQTK Unambiguous 10 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 256 4.00 0.00 1 0 50 2 669.85321 1338.69914 6.81 34.39 2923 2923 MS2 18/22 Linfeng_20130408_Smad2_8.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 291 3.98 0.00 0 26 50 2 738.89276 1476.77825 6.03 38.37 3729 3729 MS2 20/22 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 293 3.98 0.00 0 21 50 2 738.89417 1476.78105 7.93 38.21 3961 3961 MS2 20/22 Linfeng_20130408_Smad2_4.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 284 3.96 0.00 0 15 49 2 738.89093 1476.77458 3.55 38.35 3966 3966 MS2 19/22 Linfeng_20130408_Smad2_1.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 287 3.85 0.00 0 36 50 2 738.89148 1476.77568 4.29 37.89 3471 3471 MS2 19/22 Linfeng_20130408_Smad2_10.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 286 3.77 0.00 0 8 50 2 738.89282 1476.77837 6.11 38.30 3893 3893 MS2 19/22 Linfeng_20130408_Smad2_3.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 231 3.35 0.00 0 39 50 2 562.28851 1123.56975 5.99 35.89 3021 3021 MS2 15/18 Linfeng_20130408_Smad2_2.raw High FLEQQNQVLETK Unambiguous 5 1 Q86Y46 CID 1.0000 0.0000 1 1 289 3.27 0.00 0 6 50 2 738.89319 1476.77910 6.61 38.04 4030 4030 MS2 19/22 Linfeng_20130408_Smad2_8.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 3.26 0.00 1 21 50 3 378.52829 1133.57032 7.34 33.89 2644 2644 MS2 20/32 Linfeng_20130408_Smad2_1.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 241 3.23 0.00 0 47 50 2 562.28894 1123.57060 6.75 35.76 3035 3035 MS2 15/18 Linfeng_20130408_Smad2_6.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 3.21 0.00 0 83 50 2 562.28802 1123.56877 5.12 35.67 3268 3268 MS2 15/18 Linfeng_20130408_Smad2_5.raw High SKAEAEALYQTK Unambiguous 10 2 F5H8K9;Q86Y46 CID 1.0000 0.0000 1 1 232 3.18 0.00 1 19 50 3 446.90393 1338.69724 5.39 34.43 2936 2936 MS2 23/44 Linfeng_20130408_Smad2_8.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 225 3.11 0.00 0 44 50 2 562.28754 1123.56780 4.25 35.74 2990 2990 MS2 15/18 Linfeng_20130408_Smad2_7.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 215 3.09 0.00 0 53 50 2 562.28821 1123.56914 5.45 35.44 2799 2799 MS2 15/18 Linfeng_20130408_Smad2_10.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 221 2.98 0.00 0 25 50 2 562.28833 1123.56938 5.66 35.79 3154 3154 MS2 15/18 Linfeng_20130408_Smad2_3.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 224 2.90 0.00 0 44 50 2 562.28882 1123.57036 6.53 35.71 3199 3199 MS2 15/18 Linfeng_20130408_Smad2_4.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 254 2.87 0.00 0 25 50 2 562.28717 1123.56706 3.60 35.92 3248 3248 MS2 15/18 Linfeng_20130408_Smad2_1.raw High AEAEALYQTK Unambiguous 13 3 F5H8K9;Q86Y46;B4DQ49 CID 1.0000 0.0000 1 1 234 2.71 0.00 0 56 50 2 562.28815 1123.56902 5.34 35.48 3253 3253 MS2 15/18 Linfeng_20130408_Smad2_8.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.66 0.00 0 23 50 2 503.24084 1005.47441 7.35 34.63 2825 2825 MS2 13/14 Linfeng_20130408_Smad2_3.raw High KLLEGEEcR Unambiguous 19 5 P35908;P13647;P02538;P04259;Q86Y46 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 2.60 0.00 1 46 50 2 567.29004 1133.57280 9.53 33.82 2484 2484 MS2 14/16 Linfeng_20130408_Smad2_6.raw High LLEGEEcR Unambiguous 22 6 P35908;P13647;P02538;P04259;Q86Y46;B4DQ49 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 2.55 0.00 0 21 50 2 503.24091 1005.47453 7.47 34.51 2834 2834 MS2 13/14 Linfeng_20130408_Smad2_4.raw P06733 Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2 - [ENOA_HUMAN] 8.06 2 3 3 3 10.36 8.06 3 3 434 47.1 7.39 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YISPDQLADLYK Unambiguous 2 1 P06733 CID 1.0000 0.0000 1 1 213 3.60 0.00 0 20 31 2 713.36932 1425.73137 3.72 41.49 5086 5086 MS2 19/22 Linfeng_20130408_Smad2_9.raw High GNPTVEVDLFTSK Unambiguous 1 1 P06733 CID 1.0000 0.0000 1 1 244 3.47 0.00 0 13 44 2 703.86621 1406.72515 6.32 41.11 4945 4945 MS2 18/24 Linfeng_20130408_Smad2_9.raw High IGAEVYHNLK Unambiguous 2 1 P06733 CID 1.0000 0.0000 1 1 239 3.30 0.00 0 33 50 2 572.31537 1143.62346 6.77 35.81 3195 3195 MS2 16/18 Linfeng_20130408_Smad2_9.raw P07327 Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2 - [ADH1A_HUMAN] 8.00 1 2 2 2 6.49 8.00 2 2 375 39.8 7.94 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KPFSIEEVEVAPPK Unambiguous 1 1 P07327 CID 1.0000 0.0000 1 1 160 3.73 0.00 1 0 50 2 785.43610 1569.86492 7.99 39.87 4496 4496 MS2 20/26 Linfeng_20130408_Smad2_4.raw High NDVSNPQGTLQDGTSR Unambiguous 1 1 P07327 CID 1.0000 0.0000 1 1 131 2.76 0.00 0 11 50 2 844.90271 1688.79814 8.67 35.09 3015 3015 MS2 17/30 Linfeng_20130408_Smad2_4.raw P08107 Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5 - [HSP71_HUMAN] 7.96 11 2 4 4 0.00 13.17 7.96 4 4 641 70.0 5.66 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQVALNPQNTVFDAK Unambiguous 3 1 P08107 CID 1.0000 0.0000 1 1 221 4.24 0.00 0 11 50 2 829.93469 1658.86211 7.46 39.56 4420 4420 MS2 21/28 Linfeng_20130408_Smad2_9.raw High DAGVIAGLNVLR Unambiguous 10 1 P08107 CID 1.0000 0.0000 1 1 119 3.76 0.00 0 11 17 2 599.35376 1197.70024 4.32 41.83 5212 5212 MS2 20/22 Linfeng_20130408_Smad2_9.raw High TTPSYVAFTDTER Unambiguous 30 2 P08107;E9PLF4 CID 1.0000 0.0000 1 1 166 2.60 0.00 0 20 36 2 744.35852 1487.70976 5.68 39.33 4342 4342 MS2 18/24 Linfeng_20130408_Smad2_9.raw High VEIIANDQGNR Unambiguous 32 3 P08107;E9PLF4;B4DEF7 CID 1.0000 0.0000 1 2 225 2.57 0.00 0 20 50 2 614.82208 1228.63689 7.15 35.69 3157 3157 MS2 16/20 Linfeng_20130408_Smad2_9.raw B4DPV0 Phosphoglucomutase-1 OS=Homo sapiens GN=PGM1 PE=2 SV=1 - [B4DPV0_HUMAN] 7.95 4 2 2 2 7.54 7.95 2 2 365 40.3 5.91 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADNFEYSDPVDGSISR Unambiguous 4 1 B4DPV0 CID 1.0000 0.0000 1 1 82 3.80 0.00 0 20 50 2 886.40027 1771.79326 9.17 39.53 4388 4388 MS2 17/30 Linfeng_20130408_Smad2_4.raw High YDYEEVEAEGANK Unambiguous 4 1 B4DPV0 CID 1.0000 0.0000 1 1 61 3.75 0.00 0 30 50 2 758.83234 1516.65740 8.92 37.04 3619 3619 MS2 19/24 Linfeng_20130408_Smad2_4.raw P15924 Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3 - [DESP_HUMAN] 7.70 3 21 21 32 6.56 0.80 2 2 93.21 7.70 21 30 2871 331.6 6.81 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ITNLTQQLEQASIVK Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 135 5.75 0.00 0 17 45 2 843.48016 1685.95305 5.79 41.29 5010 5010 MS2 24/28 Linfeng_20130408_Smad2_9.raw High LNDSILQATEQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 272 4.39 0.00 0 13 50 2 694.36768 1387.72807 7.52 39.15 4282 4282 MS2 19/22 Linfeng_20130408_Smad2_9.raw High LNDSILQATEQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 274 4.35 0.00 0 12 50 2 694.36749 1387.72771 7.25 39.44 4262 4262 MS2 18/22 Linfeng_20130408_Smad2_3.raw High TLELQGLINDLQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 157 4.18 0.00 0 25 50 2 756.92596 1512.84465 4.33 42.27 5375 5375 MS2 18/24 Linfeng_20130408_Smad2_9.raw High LNDSILQATEQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 277 3.85 0.00 0 13 50 2 694.36865 1387.73003 8.93 39.38 4112 4112 MS2 17/22 Linfeng_20130408_Smad2_6.raw High LNDSILQATEQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 286 3.60 0.00 0 9 50 2 694.36560 1387.72392 4.53 39.38 4051 4051 MS2 18/22 Linfeng_20130408_Smad2_7.raw High LNDSILQATEQR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 276 3.37 0.00 0 28 50 2 694.36523 1387.72319 4.00 39.58 4731 4731 MS2 17/22 Linfeng_20130405_rIgG4.raw High GIVDSITGQR Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 337 3.33 0.00 0 25 50 2 523.28894 1045.57060 6.60 39.14 4281 4281 MS2 16/18 Linfeng_20130408_Smad2_9.raw High QLQNIIQATSR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 239 3.19 0.00 0 14 31 2 636.35895 1271.71062 3.10 39.21 4410 4410 MS2 16/20 Linfeng_20130405_rIgG2.raw High QLQNIIQATSR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 192 3.18 0.00 0 19 50 2 636.36163 1271.71599 7.33 39.01 3994 3994 MS2 15/20 Linfeng_20130408_Smad2_6.raw High QLQNIIQATSR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 221 3.14 0.00 0 54 50 2 636.35913 1271.71099 3.39 38.84 4180 4180 MS2 13/20 Linfeng_20130408_Smad2_9.raw High QLQNIIQATSR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 202 3.09 0.00 0 12 50 2 636.35962 1271.71196 4.16 39.01 3932 3932 MS2 14/20 Linfeng_20130408_Smad2_7.raw High QLQNIIQATSR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 222 3.06 0.00 0 40 50 2 636.35968 1271.71208 4.26 39.05 4134 4134 MS2 15/20 Linfeng_20130408_Smad2_3.raw High AELIVQPELK Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 86 3.05 0.00 0 58 32 2 570.33960 1139.67192 4.22 39.77 4490 4490 MS2 13/18 Linfeng_20130408_Smad2_9.raw High IEVLEEELR Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 314 3.03 0.00 0 23 32 2 565.31104 1129.61479 4.25 40.44 4717 4717 MS2 15/16 Linfeng_20130408_Smad2_9.raw High AELIVQPELK Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 85 2.93 0.00 0 46 50 2 570.34045 1139.67363 5.72 40.03 4455 4455 MS2 12/18 Linfeng_20130408_Smad2_3.raw High NTLTQTTENLR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 274 2.78 0.00 0 12 50 2 645.83777 1290.66826 2.63 37.11 3627 3627 MS2 15/20 Linfeng_20130408_Smad2_9.raw High VQEQELTR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 310 2.78 0.00 0 61 50 2 501.76840 1002.52953 8.02 33.29 2410 2410 MS2 12/14 Linfeng_20130408_Smad2_9.raw High AITGFDDPFSGK Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 173 2.73 0.00 0 14 50 2 627.80713 1254.60698 5.44 41.29 5011 5011 MS2 16/22 Linfeng_20130408_Smad2_9.raw High ANSSATETINK Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 232 2.68 0.00 0 52 50 2 568.28772 1135.56816 8.07 31.81 2120 2120 MS2 14/20 Linfeng_20130408_Smad2_1.raw High QQIQNDLNQWK Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 223 2.68 0.00 0 23 50 2 707.86139 1414.71550 5.73 38.77 4156 4156 MS2 13/20 Linfeng_20130408_Smad2_9.raw High SQLQISNNR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 258 2.68 0.00 0 20 50 2 530.28278 1059.55828 3.86 34.65 2872 2872 MS2 13/16 Linfeng_20130408_Smad2_1.raw High GAGSIAGASASPK Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 324 2.68 0.00 0 25 50 2 537.28717 1073.56706 7.86 33.08 2356 2356 MS2 16/24 Linfeng_20130408_Smad2_9.raw High LQSLTENLTK Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 204 2.64 0.00 0 31 50 2 573.82532 1146.64336 5.96 38.41 3744 3744 MS2 13/18 Linfeng_20130408_Smad2_2.raw High LLQLQEQMR Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 288 2.61 0.00 0 21 50 2 579.82343 1158.63957 8.25 39.11 4270 4270 MS2 15/16 Linfeng_20130408_Smad2_9.raw High LQSLTENLTK Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 232 2.60 0.00 0 51 50 2 573.82574 1146.64421 6.71 38.00 3900 3900 MS2 13/18 Linfeng_20130408_Smad2_9.raw High SQLQISNNR Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 305 2.59 0.00 0 26 50 2 530.28522 1059.56316 8.47 34.32 2716 2716 MS2 14/16 Linfeng_20130408_Smad2_9.raw High NQFETEINITK Unambiguous 1 1 P15924 CID 1.0000 0.0000 1 1 276 2.59 0.00 0 14 50 2 668.84351 1336.67974 4.01 39.27 4324 4324 MS2 16/20 Linfeng_20130408_Smad2_9.raw High VLLQEEGTR Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 331 2.58 0.00 0 40 50 2 522.79071 1044.57414 5.45 36.05 3272 3272 MS2 15/16 Linfeng_20130408_Smad2_9.raw High QVQNLVNK Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 240 2.57 0.00 0 65 50 2 471.77567 942.54405 7.76 33.99 2804 2804 MS2 10/14 Linfeng_20130408_Smad2_8.raw High IQSQFTDAQK Unambiguous 3 1 P15924 CID 1.0000 0.0000 1 1 284 2.55 0.00 0 12 50 2 583.29980 1165.59233 6.44 34.94 2916 2916 MS2 12/18 Linfeng_20130408_Smad2_3.raw High YGDGIQLTR Unambiguous 2 1 P15924 CID 1.0000 0.0000 1 1 240 2.54 0.00 0 40 50 2 511.77115 1022.53502 8.26 38.09 3824 3824 MS2 15/16 Linfeng_20130408_Smad2_3.raw F8VZY9 "Keratin, type I cytoskeletal 18 OS=Homo sapiens GN=KRT18 PE=3 SV=1 - [F8VZY9_HUMAN]" 7.67 2 2 2 2 7.58 7.67 2 2 0.00 391 43.7 5.35 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High PVSSAASVYAGAGGSGSR Unambiguous 2 1 F8VZY9 CID 1.0000 0.0000 1 1 207 4.46 0.00 0 3 50 2 790.89203 1580.77678 6.57 36.11 3374 3374 MS2 26/34 Linfeng_20130405_rIgG6.raw High AQIFANTVDNAR Unambiguous 2 1 F8VZY9 CID 1.0000 0.0000 1 1 260 3.13 0.00 0 22 50 2 660.34180 1319.67632 4.56 38.30 4055 4055 MS2 19/22 Linfeng_20130405_rIgG6.raw P43243 Matrin-3 OS=Homo sapiens GN=MATR3 PE=1 SV=2 - [MATR3_HUMAN] 6.73 4 3 3 4 18.33 6.73 3 4 847 94.6 6.25 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLSAAGIGLLAAATQSLSMPASLGR Unambiguous 4 1 P43243 CID 1.0000 0.0000 1 1 157 6.25 0.00 0 6 37 3 791.09650 2371.27494 4.14 43.64 5981 5981 MS2 36/96 Linfeng_20130405_rIgG3.raw High DLSAAGIGLLAAATQSLSmPASLGR Unambiguous 4 1 P43243 M19(Oxidation) CID 1.0000 0.0000 1 1 186 4.86 0.00 0 12 24 3 796.42896 2387.27231 5.15 43.39 5925 5925 MS2 33/96 Linfeng_20130405_rIgG3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 2 1 P43243 CID 1.0000 0.0000 1 1 136 3.82 0.00 0 36 27 2 985.04773 1969.08818 4.46 42.06 5427 5427 MS2 19/34 Linfeng_20130405_rIgG3.raw High ITPENLPQILLQLK Unambiguous 4 1 P43243 CID 1.0000 0.0000 1 1 18 3.40 0.00 0 12 11 3 540.66479 1619.97983 4.13 42.85 5749 5749 MS2 22/52 Linfeng_20130405_rIgG3.raw P33993-2 Isoform 2 of DNA replication licensing factor MCM7 OS=Homo sapiens GN=MCM7 - [MCM7_HUMAN] 6.43 5 2 2 2 7.05 6.43 2 2 389 44.6 6.24 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEDDESGAGELTR Unambiguous 5 1 P33993-2 CID 1.0000 0.0000 1 1 44 3.66 0.00 0 5 50 2 683.29596 1365.58464 5.94 34.49 3087 3087 MS2 21/24 Linfeng_20130405_rIgG4.raw High SITVLVEGENTR Unambiguous 5 1 P33993-2 CID 1.0000 0.0000 1 1 298 3.39 0.00 0 28 50 2 659.35669 1317.70610 3.92 39.50 4703 4703 MS2 17/22 Linfeng_20130405_rIgG4.raw Q02413 Desmoglein-1 OS=Homo sapiens GN=DSG1 PE=1 SV=2 - [DSG1_HUMAN] 6.39 1 5 5 15 10.49 2.86 2 3 40.83 6.39 5 12 1049 113.7 5.03 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 205 4.52 0.00 0 0 50 2 875.92773 1750.84819 3.00 41.06 4789 4789 MS2 24/30 Linfeng_20130408_Smad2_3.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 206 4.28 0.00 0 22 50 2 875.92841 1750.84953 3.76 40.81 4403 4403 MS2 22/30 Linfeng_20130408_Smad2_10.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 232 4.17 0.00 0 10 50 2 875.93146 1750.85564 7.25 41.11 4608 4608 MS2 24/30 Linfeng_20130408_Smad2_2.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 196 3.88 0.00 0 0 50 2 875.92950 1750.85173 5.02 41.04 4578 4578 MS2 22/30 Linfeng_20130408_Smad2_7.raw High IHSDcAANQQVTYR Unambiguous 1 1 Q02413 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 151 3.70 0.00 0 38 50 3 554.93030 1662.77634 6.62 33.74 2663 2663 MS2 27/52 Linfeng_20130405_rIgG3.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 234 3.65 0.00 0 16 50 2 875.93323 1750.85918 9.27 41.01 4866 4866 MS2 24/30 Linfeng_20130408_Smad2_4.raw High IHSDcAANQQVTYR Unambiguous 1 1 Q02413 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 3.60 0.00 0 45 50 3 554.93085 1662.77799 7.62 33.63 2443 2443 MS2 24/52 Linfeng_20130408_Smad2_6.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 Q02413 M3(Oxidation) CID 1.0000 0.0000 1 1 205 3.58 0.00 0 49 28 2 875.92950 1750.85173 5.02 41.13 5067 5067 MS2 23/30 Linfeng_20130405_rIgG2.raw High IHSDcAANQQVTYR Unambiguous 1 1 Q02413 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 152 3.22 0.00 0 35 50 3 554.93024 1662.77616 6.51 33.80 2644 2644 MS2 20/52 Linfeng_20130405_rIgG1.raw High QEPSDSPmFIINR Unambiguous 1 1 Q02413 M8(Oxidation) CID 1.0000 0.0000 1 1 184 2.98 0.00 0 7 50 2 775.37408 1549.74089 6.00 39.68 4342 4342 MS2 13/24 Linfeng_20130408_Smad2_3.raw High TYVVTGNmGSNDK Unambiguous 1 1 Q02413 M8(Oxidation) CID 1.0000 0.0000 1 1 94 2.97 0.00 0 5 50 2 701.32471 1401.64214 7.57 34.20 2737 2737 MS2 18/24 Linfeng_20130408_Smad2_1.raw High QEPSDSPmFIINR Unambiguous 1 1 Q02413 M8(Oxidation) CID 1.0000 0.0000 1 1 209 2.86 0.00 0 40 50 2 775.37659 1549.74590 9.23 39.63 4420 4420 MS2 14/24 Linfeng_20130408_Smad2_4.raw High QEPSDSPmFIINR Unambiguous 1 1 Q02413 M8(Oxidation) CID 1.0000 0.0000 1 1 205 2.79 0.00 0 32 50 2 775.37598 1549.74468 8.44 39.46 4389 4389 MS2 15/24 Linfeng_20130408_Smad2_9.raw High QEPSDSPmFIINR Unambiguous 1 1 Q02413 M8(Oxidation) CID 1.0000 0.0000 1 1 201 2.58 0.00 0 18 50 2 775.37518 1549.74309 7.42 39.69 4155 4155 MS2 12/24 Linfeng_20130408_Smad2_2.raw High ALNSmGQDLER Unambiguous 1 1 Q02413 M5(Oxidation) CID 1.0000 0.0000 1 1 176 2.55 0.00 0 44 50 2 625.30121 1249.59514 8.76 34.64 2829 2829 MS2 15/20 Linfeng_20130408_Smad2_3.raw H3BT07 Haptoglobin beta chain (Fragment) OS=Homo sapiens GN=HP PE=3 SV=1 - [H3BT07_HUMAN] 6.30 2 2 2 2 5.89 6.30 2 2 365 40.7 5.82 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TEGDGVYTLNNEK Unambiguous 2 1 H3BT07 CID 1.0000 0.0000 1 1 146 3.03 0.00 0 9 50 2 720.34174 1439.67620 7.82 36.59 3478 3478 MS2 18/24 Linfeng_20130408_Smad2_4.raw High VTSIQDWVQK Unambiguous 2 1 H3BT07 CID 1.0000 0.0000 1 1 298 2.86 0.00 0 50 50 2 602.32660 1203.64592 7.53 40.09 4569 4569 MS2 14/18 Linfeng_20130408_Smad2_4.raw B7Z1I2 Aspartate aminotransferase OS=Homo sapiens GN=GOT1 PE=2 SV=1 - [B7Z1I2_HUMAN] 6.28 3 2 2 2 5.50 6.28 2 2 366 41.0 7.18 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGGVQSLGGTGALR Unambiguous 3 1 B7Z1I2 CID 1.0000 0.0000 1 1 211 2.83 0.00 0 44 50 2 636.36224 1271.71721 8.26 38.11 3929 3929 MS2 16/26 Linfeng_20130408_Smad2_4.raw High VGNLTVVGK Unambiguous 3 1 B7Z1I2 CID 1.0000 0.0000 1 1 271 2.68 0.00 0 45 50 2 443.77460 886.54192 7.02 36.55 3462 3462 MS2 13/16 Linfeng_20130408_Smad2_4.raw F5H8J2 Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=3 SV=1 - [F5H8J2_HUMAN] 6.21 4 2 2 3 10.34 6.21 2 3 451 51.1 4.93 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDATEESDLAQQYGVR Unambiguous 4 1 F5H8J2 CID 1.0000 0.0000 1 1 183 4.22 0.00 0 7 50 2 890.92877 1780.85027 8.65 39.42 4352 4352 MS2 22/30 Linfeng_20130408_Smad2_4.raw High mDSTANEVEAVK Unambiguous 4 1 F5H8J2 M1(Oxidation) CID 1.0000 0.0000 1 1 142 3.27 0.00 0 20 50 2 655.30591 1309.60454 7.97 34.69 2836 2836 MS2 19/22 Linfeng_20130408_Smad2_9.raw High MDSTANEVEAVK Unambiguous 4 1 F5H8J2 CID 1.0000 0.0000 1 1 159 2.85 0.00 0 27 50 2 647.30743 1293.60759 6.50 35.54 3106 3106 MS2 17/22 Linfeng_20130408_Smad2_9.raw P38919 Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4 - [IF4A3_HUMAN] 6.08 1 2 2 2 6.21 6.08 2 2 411 46.8 6.73 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High mLVLDEADEmLNK Unambiguous 1 1 P38919 M1(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 191 3.13 0.00 0 23 50 2 776.87000 1552.73271 5.98 39.80 4569 4569 MS2 21/24 Linfeng_20130405_rIgG6.raw High DVIAQSQSGTGK Unambiguous 1 1 P38919 CID 1.0000 0.0000 1 1 286 3.07 0.00 0 26 50 2 595.80865 1190.61003 7.41 33.35 2585 2585 MS2 15/22 Linfeng_20130405_rIgG6.raw Q86YZ3 Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2 - [HORN_HUMAN] 6.07 1 6 6 20 34.51 4.39 5 9 37.23 4.74 4 11 2850 282.2 10.04 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HGSGSGQSSSYGPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 25 4.77 0.00 0 19 50 3 773.66315 2318.97489 3.93 36.56 3590 3590 MS2 33/92 Linfeng_20130405_rIgG2.raw High HGSGSGQSSSYGPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 33 4.33 0.00 0 8 50 3 773.66553 2318.98203 7.01 36.49 3434 3434 MS2 35/92 Linfeng_20130408_Smad2_1.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 41 4.25 0.00 0 21 50 3 783.67029 2348.99631 8.51 36.41 3180 3180 MS2 32/92 Linfeng_20130408_Smad2_2.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 36 4.18 0.00 0 12 43 3 783.66693 2348.98624 4.22 36.44 3485 3485 MS2 33/92 Linfeng_20130405_rIgG6.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 37 4.06 0.00 0 4 38 3 783.66711 2348.98679 4.45 36.43 3705 3705 MS2 34/92 Linfeng_20130405_rIgG4.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 38 4.03 0.00 0 5 39 3 783.66748 2348.98789 4.92 36.40 3416 3416 MS2 38/92 Linfeng_20130405_rIgG7.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 41 3.90 0.00 0 10 50 3 783.66931 2348.99338 7.26 36.38 3398 3398 MS2 36/92 Linfeng_20130408_Smad2_1.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 43 3.85 0.00 0 10 50 3 783.66852 2348.99100 6.25 36.25 3184 3184 MS2 34/92 Linfeng_20130408_Smad2_6.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 38 3.84 0.00 0 10 17 3 783.66748 2348.98789 4.92 36.45 3556 3556 MS2 32/92 Linfeng_20130405_rIgG2.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 42 3.72 0.00 0 17 50 3 783.66962 2348.99430 7.65 36.31 3157 3157 MS2 32/92 Linfeng_20130408_Smad2_7.raw High GSGSGQSPSSGQHGTGFGR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 82 3.63 0.00 0 8 50 2 874.39777 1747.78826 7.96 32.61 2461 2461 MS2 19/36 Linfeng_20130405_rIgG2.raw High HGSGSGQSSSYGPYR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 59 3.43 0.00 0 0 50 2 763.84003 1526.67278 7.13 33.22 2608 2608 MS2 21/28 Linfeng_20130405_rIgG2.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 37 3.38 0.00 0 0 50 3 783.66724 2348.98716 4.61 36.50 3334 3334 MS2 34/92 Linfeng_20130405_rIgG10.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 44 3.34 0.00 0 16 50 3 783.67017 2348.99594 8.35 36.33 3320 3320 MS2 31/92 Linfeng_20130408_Smad2_3.raw High GPYESGSGHSSGLGHQESR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 102 3.20 0.00 0 14 50 3 643.62610 1928.86374 8.05 32.46 2426 2426 MS2 24/72 Linfeng_20130405_rIgG2.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 139 3.16 0.00 0 0 50 2 792.86865 1584.73003 9.48 32.05 2285 2285 MS2 16/30 Linfeng_20130408_Smad2_5.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 133 2.77 0.00 0 3 50 2 792.86786 1584.72844 8.47 32.18 2204 2204 MS2 16/30 Linfeng_20130408_Smad2_1.raw High HGSGSGQSSSYGPYR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 65 2.67 0.00 0 13 50 2 763.84180 1526.67632 9.45 33.21 2454 2454 MS2 15/28 Linfeng_20130408_Smad2_3.raw High HGSGSGQSSSYGPYR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 57 2.62 0.00 0 3 50 2 763.84204 1526.67681 9.77 33.07 2529 2529 MS2 18/28 Linfeng_20130408_Smad2_5.raw High HGSGSGQSSSYGPYR Unambiguous 1 1 Q86YZ3 CID 1.0000 0.0000 1 1 50 2.60 0.00 0 15 50 2 763.84003 1526.67278 7.13 33.20 2463 2463 MS2 16/28 Linfeng_20130408_Smad2_1.raw P52272-2 Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Homo sapiens GN=HNRNPM - [HNRPM_HUMAN] 5.64 3 3 3 3 10.89 5.64 3 3 691 73.6 8.82 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LGSTVFVANLDYK Unambiguous 3 1 P52272-2 CID 1.0000 0.0000 1 1 180 3.95 0.00 0 15 14 2 713.88599 1426.76470 4.90 41.46 5421 5421 MS2 18/24 Linfeng_20130405_rIgG4.raw High AFITNIPFDVK Unambiguous 2 1 P52272-2 CID 1.0000 0.0000 1 1 211 3.48 0.00 0 19 13 2 632.85400 1264.70073 5.59 42.09 5679 5679 MS2 17/20 Linfeng_20130405_rIgG4.raw High mGPAmGPALGAGIER Unambiguous 3 1 P52272-2 M1(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 188 3.46 0.00 0 0 50 2 730.35809 1459.70891 3.84 37.76 4126 4126 MS2 21/28 Linfeng_20130405_rIgG4.raw Q8N995 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens GN=HMGCS1 PE=2 SV=1 - [Q8N995_HUMAN]" 4.72 2 1 2 3 8.46 4.72 2 3 509 56.2 5.41 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LEVGTETIIDK Unambiguous 4 2 Q8N995;F5H8J6 CID 1.0000 0.0000 1 1 245 3.07 0.00 0 45 50 2 609.33875 1217.67021 6.40 39.15 4283 4283 MS2 16/20 Linfeng_20130408_Smad2_9.raw High LEVGTETIIDK Unambiguous 4 2 Q8N995;F5H8J6 CID 1.0000 0.0000 1 1 233 2.82 0.00 0 72 50 2 609.33856 1217.66985 6.10 39.26 4298 4298 MS2 14/20 Linfeng_20130408_Smad2_4.raw High VTQDATPGSALDK Unambiguous 2 1 Q8N995 CID 1.0000 0.0000 1 1 234 2.57 0.00 0 36 50 2 651.83594 1302.66460 8.40 34.86 2940 2940 MS2 15/24 Linfeng_20130408_Smad2_4.raw O43175 D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4 - [SERA_HUMAN] 4.69 1 2 2 2 6.32 4.69 2 2 533 56.6 6.71 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GTIQVITQGTSLK Unambiguous 1 1 O43175 CID 1.0000 0.0000 1 1 119 3.49 0.00 0 22 50 2 673.39252 1345.77776 6.80 39.34 4325 4325 MS2 16/24 Linfeng_20130408_Smad2_4.raw High ILQDGGLQVVEK Unambiguous 1 1 O43175 CID 1.0000 0.0000 1 1 171 2.83 0.00 0 40 50 2 649.87299 1298.73870 5.53 38.80 4166 4166 MS2 18/22 Linfeng_20130408_Smad2_9.raw O43707 Alpha-actinin-4 OS=Homo sapiens GN=ACTN4 PE=1 SV=2 - [ACTN4_HUMAN] 4.28 12 3 3 4 13.74 4.28 3 4 911 104.8 5.44 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGWEQLLTTIAR Unambiguous 12 1 O43707 CID 1.0000 0.0000 1 1 211 4.02 0.00 0 19 50 2 693.89478 1386.78227 5.94 42.76 5549 5549 MS2 19/22 Linfeng_20130408_Smad2_9.raw High TINEVENQILTR Unambiguous 12 1 O43707 CID 1.0000 0.0000 1 1 266 3.26 0.00 0 27 50 2 715.39172 1429.77617 8.10 40.12 4576 4576 MS2 18/22 Linfeng_20130408_Smad2_4.raw High LVSIGAEEIVDGNAK Unambiguous 1 1 O43707 CID 1.0000 0.0000 1 1 227 3.26 0.00 0 32 50 2 757.91412 1514.82097 9.78 40.37 4658 4658 MS2 17/28 Linfeng_20130408_Smad2_4.raw High TINEVENQILTR Unambiguous 12 1 O43707 CID 1.0000 0.0000 1 1 256 3.20 0.00 0 9 50 2 715.39124 1429.77519 7.42 40.08 4593 4593 MS2 17/22 Linfeng_20130408_Smad2_9.raw Q16822 "Phosphoenolpyruvate carboxykinase [GTP], mitochondrial OS=Homo sapiens GN=PCK2 PE=1 SV=3 - [PCKGM_HUMAN]" 4.22 1 2 2 2 6.55 4.22 2 2 640 70.7 7.62 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLSGDLGQLPTGIR Unambiguous 1 1 Q16822 CID 1.0000 0.0000 1 1 125 3.56 0.00 0 25 50 2 713.41290 1425.81853 8.73 41.00 4863 4863 MS2 22/26 Linfeng_20130408_Smad2_4.raw High SYLTEQVNQDLPK Unambiguous 1 1 Q16822 CID 1.0000 0.0000 1 1 264 2.99 0.00 0 46 50 2 767.89636 1534.78545 6.93 40.09 4570 4570 MS2 15/24 Linfeng_20130408_Smad2_4.raw P11586 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens GN=MTHFD1 PE=1 SV=3 - [C1TC_HUMAN]" 3.96 3 3 3 3 9.97 3.96 3 3 935 101.5 7.30 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDTESELDLISR Unambiguous 3 1 P11586 CID 1.0000 0.0000 1 1 217 3.50 0.00 0 46 50 2 689.84314 1378.67900 6.75 40.53 4709 4709 MS2 16/22 Linfeng_20130408_Smad2_4.raw High TDPTTLTDEEINR Unambiguous 3 1 P11586 CID 1.0000 0.0000 1 1 174 3.24 0.00 0 24 50 2 752.86621 1504.72515 8.32 37.97 3885 3885 MS2 18/24 Linfeng_20130408_Smad2_4.raw High DVDGLTSINAGR Unambiguous 1 1 P11586 CID 1.0000 0.0000 1 1 283 3.23 0.00 0 23 50 2 609.31470 1217.62212 8.21 38.73 4127 4127 MS2 19/22 Linfeng_20130408_Smad2_4.raw P11388 DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 - [TOP2A_HUMAN] 3.85 8 4 4 4 14.29 3.85 4 4 1531 174.3 8.72 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NSTEcTLILTEGDSAK Unambiguous 8 1 P11388 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 184 4.59 0.00 0 5 50 2 869.91638 1738.82549 5.20 39.49 4507 4507 MS2 22/30 Linfeng_20130405_rIgG2.raw High DPALNSGVSQKPDPAK Unambiguous 8 1 P11388 CID 1.0000 0.0000 1 1 244 3.42 0.00 1 41 50 3 541.95282 1623.84391 6.25 34.33 2908 2908 MS2 27/60 Linfeng_20130405_rIgG2.raw High EDLATFIEELEAVEAK Unambiguous 8 1 P11388 CID 1.0000 0.0000 1 1 274 3.22 0.00 0 12 47 3 602.97400 1806.90744 3.65 43.41 5975 5975 MS2 26/60 Linfeng_20130405_rIgG2.raw High FLEEFITPIVK Unambiguous 8 1 P11388 CID 1.0000 0.0000 1 1 164 3.06 0.00 0 9 11 2 668.38458 1335.76189 4.46 42.54 5641 5641 MS2 15/20 Linfeng_20130405_rIgG2.raw P14625 Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1 - [ENPL_HUMAN] 3.74 2 3 3 3 8.53 3.74 3 3 803 92.4 4.84 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDDEVVQR Unambiguous 2 1 P14625 CID 1.0000 0.0000 1 1 237 2.97 0.00 0 19 50 2 481.23767 961.46807 9.88 32.56 2286 2286 MS2 13/14 Linfeng_20130408_Smad2_4.raw High LSLNIDPDAK Unambiguous 1 1 P14625 CID 1.0000 0.0000 1 1 228 2.84 0.00 0 57 50 2 543.29932 1085.59136 6.99 40.04 4552 4552 MS2 14/18 Linfeng_20130408_Smad2_4.raw High ELISNASDALDK Unambiguous 3 1 P14625 CID 1.0000 0.0000 1 1 241 2.72 0.00 0 36 50 2 638.32922 1275.65117 6.60 38.35 4014 4014 MS2 16/22 Linfeng_20130408_Smad2_9.raw Q13835-2 Isoform 1 of Plakophilin-1 OS=Homo sapiens GN=PKP1 - [PKP1_HUMAN] 3.72 2 2 2 2 7.21 3.72 2 2 726 80.4 8.97 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SPNQNVQQAAAGALR Unambiguous 2 1 Q13835-2 CID 1.0000 0.0000 1 1 269 3.85 0.00 0 10 50 2 762.90149 1524.79570 5.18 37.06 3610 3610 MS2 21/28 Linfeng_20130408_Smad2_9.raw High VmGNQVFPEVTR Unambiguous 2 1 Q13835-2 M2(Oxidation) CID 1.0000 0.0000 1 1 283 3.35 0.00 0 13 50 2 696.85522 1392.70317 6.52 38.72 4138 4138 MS2 17/22 Linfeng_20130408_Smad2_9.raw Q5D862 Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1 - [FILA2_HUMAN] 3.55 1 3 3 13 33.63 3.05 2 8 16.48 1.46 2 5 2391 247.9 8.31 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 54 5.24 0.00 0 1 50 3 784.67340 2352.00565 7.84 33.61 2698 2698 MS2 30/88 Linfeng_20130405_rIgG2.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 53 4.59 0.00 0 0 50 3 784.67365 2352.00638 8.15 33.63 2629 2629 MS2 32/88 Linfeng_20130405_rIgG3.raw High SGQSSYGQHSSGSSQSSGYGQHGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 50 4.37 0.00 0 9 50 3 834.02686 2500.06601 7.66 31.30 2235 2235 MS2 33/96 Linfeng_20130405_rIgG2.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 51 4.23 0.00 0 0 50 3 784.67267 2352.00345 6.91 33.63 2577 2577 MS2 33/88 Linfeng_20130408_Smad2_1.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 41 4.10 0.00 0 0 50 3 784.67200 2352.00144 6.05 33.68 2609 2609 MS2 27/88 Linfeng_20130405_rIgG1.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 54 4.02 0.00 0 0 50 3 784.67346 2352.00583 7.92 33.61 2589 2589 MS2 30/88 Linfeng_20130405_rIgG7.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 53 3.97 0.00 0 2 50 3 784.67279 2352.00382 7.06 33.64 2649 2649 MS2 30/88 Linfeng_20130405_rIgG6.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 42 3.73 0.00 0 3 50 3 784.67230 2352.00235 6.44 33.60 2838 2838 MS2 24/88 Linfeng_20130405_rIgG4.raw High QSSYGQHGSGSSQSSGYGQYGSR Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 42 3.63 0.00 0 18 50 3 784.67249 2352.00290 6.67 33.66 2780 2780 MS2 24/88 Linfeng_20130405_rIgG9.raw High FSNSSSSNEFSK Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 53 3.26 0.00 0 45 50 2 660.79449 1320.58171 8.65 34.66 2832 2832 MS2 17/22 Linfeng_20130408_Smad2_3.raw High FSNSSSSNEFSK Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 56 3.11 0.00 0 31 50 2 660.79425 1320.58122 8.28 34.41 2741 2741 MS2 16/22 Linfeng_20130408_Smad2_9.raw High FSNSSSSNEFSK Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 52 3.10 0.00 0 40 50 2 660.79327 1320.57927 6.80 34.72 2889 2889 MS2 18/22 Linfeng_20130408_Smad2_1.raw High FSNSSSSNEFSK Unambiguous 1 1 Q5D862 CID 1.0000 0.0000 1 1 50 2.77 0.00 0 51 50 2 660.79431 1320.58135 8.37 34.57 2684 2684 MS2 18/22 Linfeng_20130408_Smad2_6.raw P22735 Protein-glutamine gamma-glutamyltransferase K OS=Homo sapiens GN=TGM1 PE=1 SV=4 - [TGM1_HUMAN] 3.55 1 2 2 2 5.35 3.55 2 2 817 89.7 6.04 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILNVGDIGGNETVTLR Unambiguous 1 1 P22735 CID 1.0000 0.0000 1 1 209 2.73 0.00 0 14 50 2 835.96216 1670.91704 5.85 41.19 4973 4973 MS2 18/30 Linfeng_20130408_Smad2_9.raw High GSGVNAAGDGTIR Unambiguous 1 1 P22735 CID 1.0000 0.0000 1 1 250 2.62 0.00 0 25 50 2 587.79877 1174.59026 7.74 33.90 2579 2579 MS2 14/24 Linfeng_20130408_Smad2_9.raw Q8N1F7 Nuclear pore complex protein Nup93 OS=Homo sapiens GN=NUP93 PE=1 SV=2 - [NUP93_HUMAN] 3.42 2 2 2 2 7.87 3.42 2 2 819 93.4 5.72 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LNQVcFDDDGTSSPQDR Unambiguous 2 1 Q8N1F7 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 4.83 0.00 0 0 50 2 977.42047 1953.83367 4.74 37.87 4162 4162 MS2 22/32 Linfeng_20130405_rIgG4.raw High NLQEIQQAGER Unambiguous 2 1 Q8N1F7 CID 1.0000 0.0000 1 1 201 3.05 0.00 0 33 50 2 643.33081 1285.65434 3.72 36.27 3653 3653 MS2 17/20 Linfeng_20130405_rIgG4.raw P07476 Involucrin OS=Homo sapiens GN=IVL PE=1 SV=2 - [INVO_HUMAN] 3.42 1 2 2 2 5.53 3.42 2 2 585 68.4 4.61 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HLVQQEGQLK Unambiguous 1 1 P07476 CID 1.0000 0.0000 1 1 163 2.90 0.00 0 46 50 2 590.33173 1179.65618 6.85 33.36 2428 2428 MS2 15/18 Linfeng_20130408_Smad2_9.raw High YLEQQEGQLK Unambiguous 1 1 P07476 CID 1.0000 0.0000 1 1 275 2.63 0.00 0 28 50 2 618.32104 1235.63481 6.58 35.56 3112 3112 MS2 16/18 Linfeng_20130408_Smad2_9.raw P55072 Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4 - [TERA_HUMAN] 2.98 1 2 2 2 5.63 2.98 2 2 806 89.3 5.26 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EVDIGIPDATGR Unambiguous 1 1 P55072 CID 1.0000 0.0000 1 1 202 2.83 0.00 0 24 50 2 621.82355 1242.63982 5.86 39.81 4505 4505 MS2 17/22 Linfeng_20130408_Smad2_9.raw High WALSQSNPSALR Unambiguous 1 1 P55072 CID 1.0000 0.0000 1 1 266 2.80 0.00 0 10 50 2 665.35236 1329.69744 4.82 39.41 4369 4369 MS2 17/22 Linfeng_20130408_Smad2_9.raw A6H8M8 C4A protein OS=Homo sapiens GN=C4A PE=2 SV=1 - [A6H8M8_HUMAN] 2.89 14 3 3 7 24.47 2.89 3 7 0.00 1698 187.6 7.12 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLSLAQEQVGGSPEK Unambiguous 14 1 A6H8M8 CID 1.0000 0.0000 1 1 210 3.79 0.00 0 11 9 2 771.41492 1541.82256 3.58 38.33 4379 4379 MS2 21/28 Linfeng_20130405_rIgG5.raw High VLSLAQEQVGGSPEK Unambiguous 14 1 A6H8M8 CID 1.0000 0.0000 1 1 224 3.75 0.00 0 4 12 2 771.41479 1541.82231 3.42 38.30 4294 4294 MS2 21/28 Linfeng_20130405_rIgG4.raw High VLSLAQEQVGGSPEK Unambiguous 14 1 A6H8M8 CID 1.0000 0.0000 1 1 231 3.61 0.00 0 25 50 2 771.41608 1541.82488 5.08 38.36 4007 4007 MS2 20/28 Linfeng_20130405_rIgG7.raw High VLSLAQEQVGGSPEK Unambiguous 14 1 A6H8M8 CID 1.0000 0.0000 1 1 212 3.59 0.00 0 17 41 2 771.41559 1541.82390 4.45 38.36 4079 4079 MS2 19/28 Linfeng_20130405_rIgG6.raw High VLSLAQEQVGGSPEK Unambiguous 14 1 A6H8M8 CID 1.0000 0.0000 1 1 228 3.45 0.00 0 10 50 2 771.41443 1541.82158 2.94 38.30 4060 4060 MS2 20/28 Linfeng_20130405_rIgG3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 12 1 A6H8M8 CID 1.0000 0.0000 1 1 74 3.27 0.00 0 9 6 3 695.73120 2085.17905 4.17 42.49 5844 5844 MS2 29/84 Linfeng_20130405_rIgG4.raw High DSSTWLTAFVLK Unambiguous 9 1 A6H8M8 CID 1.0000 0.0000 1 1 220 3.02 0.00 0 8 17 2 684.36774 1367.72820 5.55 43.07 6074 6074 MS2 16/22 Linfeng_20130405_rIgG4.raw A6NNK5 Tumor suppressor p53-binding protein 1 OS=Homo sapiens GN=TP53BP1 PE=4 SV=2 - [A6NNK5_HUMAN] 2.28 4 3 3 6 25.88 2.28 3 6 1927 208.9 4.67 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VITDVYYVDGTEVER Unambiguous 4 1 A6NNK5 CID 1.0000 0.0000 1 1 230 5.18 0.00 0 6 50 2 879.43811 1757.86894 5.50 40.24 4605 4605 MS2 24/28 Linfeng_20130405_rIgG1.raw High NVcEQGTSTVDQNFGK Unambiguous 4 1 A6NNK5 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 91 4.75 0.00 0 0 50 2 892.40381 1783.80034 4.89 36.71 3493 3493 MS2 24/30 Linfeng_20130405_rIgG1.raw High NVcEQGTSTVDQNFGK Unambiguous 4 1 A6NNK5 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 90 4.69 0.00 0 0 50 2 892.40436 1783.80144 5.50 36.75 3599 3599 MS2 21/30 Linfeng_20130405_rIgG3.raw High VITDVYYVDGTEVER Unambiguous 4 1 A6NNK5 CID 1.0000 0.0000 1 1 226 4.10 0.00 0 15 50 2 879.43793 1757.86858 5.29 40.26 4735 4735 MS2 21/28 Linfeng_20130405_rIgG3.raw High VITDVYYVDGTEVER Unambiguous 4 1 A6NNK5 CID 1.0000 0.0000 1 1 221 3.99 0.00 0 17 50 2 879.43744 1757.86760 4.73 40.26 4755 4755 MS2 22/28 Linfeng_20130405_rIgG2.raw High VDVScEPLEGVEK Unambiguous 4 1 A6NNK5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 3.17 0.00 0 12 49 2 730.85388 1460.70049 4.57 38.89 4152 4152 MS2 19/24 Linfeng_20130405_rIgG1.raw P35579 Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4 - [MYH9_HUMAN] 1.89 2 3 3 3 11.13 1.89 3 3 1960 226.4 5.60 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IAEFTTNLTEEEEK Unambiguous 1 1 P35579 CID 1.0000 0.0000 1 1 209 4.19 0.00 0 2 50 2 827.40192 1653.79656 6.71 39.49 4396 4396 MS2 21/26 Linfeng_20130408_Smad2_9.raw High IAQLEEQLDNETK Unambiguous 2 1 P35579 CID 1.0000 0.0000 1 1 223 3.99 0.00 0 9 50 2 765.89124 1530.77519 6.88 38.52 4073 4073 MS2 19/24 Linfeng_20130408_Smad2_9.raw High ALELDSNLYR Unambiguous 2 1 P35579 CID 1.0000 0.0000 1 1 283 2.94 0.00 0 26 50 2 597.31598 1193.62468 7.17 40.16 4620 4620 MS2 16/18 Linfeng_20130408_Smad2_9.raw Q8TEM1 Nuclear pore membrane glycoprotein 210 OS=Homo sapiens GN=NUP210 PE=1 SV=3 - [PO210_HUMAN] 1.38 1 2 2 2 0.00 7.13 1.38 2 2 1887 205.0 6.81 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GVAIGQTSLTASVTNK Unambiguous 1 1 Q8TEM1 CID 1.0000 0.0000 1 1 172 4.41 0.00 0 17 50 2 773.93207 1546.85686 8.58 39.00 3934 3934 MS2 24/30 Linfeng_20130408_Smad2_2.raw High VGQALELPLR Unambiguous 1 1 Q8TEM1 CID 1.0000 0.0000 1 1 87 2.72 0.00 0 42 50 2 548.33282 1095.65837 5.70 41.05 4587 4587 MS2 15/18 Linfeng_20130408_Smad2_2.raw F2Z2U9 Myosin-14 OS=Homo sapiens GN=MYH14 PE=4 SV=1 - [F2Z2U9_HUMAN] 1.29 7 2 2 2 5.77 1.29 2 2 1779 203.0 6.27 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VAEQAANDLR Unambiguous 7 1 F2Z2U9 CID 1.0000 0.0000 1 1 235 2.92 0.00 0 50 50 2 543.78448 1086.56169 7.20 34.01 2616 2616 MS2 15/18 Linfeng_20130408_Smad2_9.raw High LAQAEEQLEQETR Unambiguous 7 1 F2Z2U9 CID 1.0000 0.0000 1 1 213 2.85 0.00 0 38 50 2 772.88757 1544.76787 8.23 36.93 3567 3567 MS2 14/24 Linfeng_20130408_Smad2_9.raw Q15149-7 Isoform 7 of Plectin OS=Homo sapiens GN=PLEC - [PLEC_HUMAN] 0.73 9 3 3 3 8.75 0.73 3 3 4515 512.3 5.77 A2 B2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AQAEAQQPTFDALR Unambiguous 9 1 Q15149-7 CID 1.0000 0.0000 1 1 254 3.30 0.00 0 24 50 2 773.39130 1545.77532 6.24 38.85 4182 4182 MS2 16/26 Linfeng_20130408_Smad2_9.raw High LAAEQELIR Unambiguous 9 1 Q15149-7 CID 1.0000 0.0000 1 1 219 2.79 0.00 0 33 50 2 521.80042 1042.59355 4.18 38.07 3920 3920 MS2 15/16 Linfeng_20130408_Smad2_9.raw High LQAEEVAQQK Unambiguous 9 1 Q15149-7 CID 1.0000 0.0000 1 1 300 2.65 0.00 0 44 50 2 572.30811 1143.60893 7.39 33.84 2561 2561 MS2 14/18 Linfeng_20130408_Smad2_9.raw