Accession Description ?Coverage ?# Proteins ?# Unique Peptides ?# Peptides ?# PSMs Score A2 Coverage A2 # Peptides A2 # PSM A2 Score B2 Coverage B2 # Peptides B2 # PSM B2 Score C2 Coverage C2 # Peptides C2 # PSM C2 # AAs MW [kDa] calc. pI IPI00021304.1 "Keratin, type II cytoskeletal 2 epidermal" 86.67 2 36 52 1086 986.70 67.91 37 315 940.43 68.99 39 277 1788.78 56.28 28 494 645 65.8 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 30 9.00 0.00 0 2 25 3 944.40491 2831.20017 2.05 38.57 3895 3895 MS2 62/140 Linfeng_122411_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 32 8.77 0.00 0 15 25 3 944.40631 2831.20438 3.54 38.49 3999 3999 MS2 62/140 Linfeng_122411_rIgG_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 29 8.65 0.00 0 4 11 3 944.40466 2831.19944 1.80 38.57 3871 3871 MS2 62/140 Linfeng_122411_rIgG_3.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 8.48 0.00 0 3 59 3 944.40607 2831.20365 3.28 48.00 6411 6411 MS2 56/140 Linfeng_20120130_CHD1_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 18 8.14 0.00 0 6 16 3 944.40045 2831.18680 -2.67 39.32 4698 4698 MS2 60/140 Linfeng_091311_rIgG_2.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 20 7.84 0.00 0 10 25 3 944.40143 2831.18973 -1.63 39.37 4640 4640 MS2 62/140 Linfeng_091311_rIgG_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 91 7.43 0.00 0 76 100 3 944.40674 2831.20566 3.99 47.72 6341 6341 MS2 51/140 Linfeng_20120130_CHD1_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 32 7.41 0.00 0 4 25 3 944.40564 2831.20237 2.83 38.67 4069 4069 MS2 61/140 Linfeng_122411_rIgG_6.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 20 7.39 0.00 0 10 25 3 944.40228 2831.19229 -0.73 39.37 4646 4646 MS2 55/140 Linfeng_091311_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 149 7.03 0.00 0 9 10 4 1023.77374 4092.07314 0.07 43.10 4831 4831 MS2 59/258 Linfeng_122411_rIgG_5.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 155 6.92 0.00 0 9 10 4 1023.77136 4092.06362 -2.26 43.90 5032 5032 MS2 57/258 Linfeng_091311_rIgG_1.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 139 6.74 0.00 0 4 25 4 1023.77655 4092.08437 2.82 43.22 4473 4473 MS2 58/258 Linfeng_122411_rIgG_3.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 130 6.69 0.00 0 0 25 4 1023.77753 4092.08828 3.77 43.29 4492 4492 MS2 58/258 Linfeng_122411_rIgG_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 6.55 0.00 0 3 10 4 1023.77301 4092.07021 -0.65 44.04 5298 5298 MS2 58/258 Linfeng_091311_rIgG_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 475 6.32 0.00 0 0 43 3 1022.16986 3064.49503 1.87 48.36 4992 4992 MS2 38/104 Linfeng_20120130_CHD1_6.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 84 6.30 0.00 0 5 83 3 944.40527 2831.20127 2.44 47.91 6390 6390 MS2 42/140 Linfeng_20120130_CHD1_4.raw High GGGFGGGSGFGGGSGFGGGSGFSGGGFGGGGFGGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 19 6.25 0.00 0 21 25 3 944.40009 2831.18570 -3.05 39.65 4654 4654 MS2 50/140 Linfeng_091311_rIgG_6.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 527 6.17 0.00 0 74 100 3 825.40594 2474.20328 4.25 35.88 3720 3720 MS2 36/96 Linfeng_20120130_CHD1_1.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 6.05 0.00 0 8 25 4 1023.77307 4092.07046 -0.59 44.14 5240 5240 MS2 57/258 Linfeng_091311_rIgG_4.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 263 6.02 0.00 0 0 25 3 1016.84033 3048.50644 3.96 40.85 4182 4182 MS2 47/104 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 492 5.99 0.00 0 17 100 2 919.96442 1838.92156 3.83 44.53 5627 5627 MS2 27/42 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 471 5.96 0.00 0 13 100 2 919.96307 1838.91887 2.37 48.23 6469 6469 MS2 27/42 Linfeng_20120130_CHD1_4.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 156 5.93 0.00 0 4 25 4 1023.77307 4092.07046 -0.59 44.08 5235 5235 MS2 55/258 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 396 5.81 0.00 0 0 100 2 1237.60510 2474.20293 4.11 36.70 3494 3494 MS2 26/48 Linfeng_20120130_CHD1_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 158 5.79 0.00 0 6 19 4 1023.77118 4092.06289 -2.44 44.35 5228 5228 MS2 60/258 Linfeng_091311_rIgG_5.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 5.78 0.00 2 6 25 4 642.32599 2566.28213 1.43 29.41 2724 2724 MS2 47/126 Linfeng_122411_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 405 5.76 0.00 0 0 100 2 1237.60266 2474.19805 2.14 36.53 3458 3458 MS2 28/48 Linfeng_20120130_CHD1_2.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 213 5.73 0.00 0 0 100 2 1072.47913 2143.95098 2.84 30.49 2861 2861 MS2 24/34 Linfeng_20120130_CHD1_5.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 480 5.65 0.00 0 2 58 3 1022.16956 3064.49411 1.58 48.34 6687 6687 MS2 43/104 Linfeng_20120130_CHD1_10.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 398 5.62 0.00 0 0 100 2 1237.60620 2474.20513 5.00 37.49 4194 4194 MS2 27/48 Linfeng_20120130_CHD1_4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 422 5.61 0.00 0 0 100 2 1237.60522 2474.20317 4.21 36.14 3776 3776 MS2 27/48 Linfeng_20120130_CHD1_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 466 5.60 0.00 0 24 100 2 919.96509 1838.92290 4.56 43.69 5984 5984 MS2 25/42 Linfeng_20120130_CHD1_5.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 180 5.58 0.00 1 4 25 3 715.73419 2145.18802 3.62 40.93 4192 4192 MS2 35/68 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 494 5.55 0.00 0 4 100 2 919.96588 1838.92449 5.42 45.55 5852 5852 MS2 30/42 Linfeng_20120130_CHD1_4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 528 5.53 0.00 0 2 100 3 825.40607 2474.20365 4.40 37.19 4144 4144 MS2 37/96 Linfeng_20120130_CHD1_4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 402 5.36 0.00 0 0 100 2 1237.60510 2474.20293 4.11 35.82 4156 4156 MS2 25/48 Linfeng_20120130_CHD1_5.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 5.36 0.00 2 5 25 3 856.09998 2566.28537 2.69 29.57 2745 2745 MS2 35/84 Linfeng_122411_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 512 5.34 0.00 0 14 100 3 825.40582 2474.20292 4.11 37.85 4255 4255 MS2 32/96 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 318 5.34 0.00 2 8 25 4 642.32611 2566.28261 1.62 29.40 2692 2692 MS2 45/126 Linfeng_122411_rIgG_3.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 474 5.30 0.00 0 0 58 3 1022.17053 3064.49704 2.53 48.35 6499 6499 MS2 36/104 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 493 5.29 0.00 0 13 100 2 919.96161 1838.91594 0.78 48.20 7134 7134 MS2 26/42 Linfeng_20120130_CHD1_5.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 473 5.29 0.00 0 8 52 3 1022.16925 3064.49320 1.28 48.29 6526 6526 MS2 38/104 Linfeng_20120130_CHD1_1.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 474 5.27 0.00 0 0 19 3 1022.16986 3064.49503 1.87 48.26 7151 7151 MS2 39/104 Linfeng_20120130_CHD1_5.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 506 5.26 0.00 0 19 100 3 825.40552 2474.20200 3.74 38.43 4366 4366 MS2 33/96 Linfeng_20120130_CHD1_4.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 154 5.24 0.00 0 1 25 3 1364.69336 4092.06552 -1.79 44.08 5302 5302 MS2 44/172 Linfeng_091311_rIgG_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 480 5.20 0.00 0 1 39 3 1022.16949 3064.49393 1.52 48.34 6201 6201 MS2 39/104 Linfeng_20120130_CHD1_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 400 5.20 0.00 0 0 100 2 1237.60303 2474.19878 2.43 36.63 3478 3478 MS2 25/48 Linfeng_20120130_CHD1_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 485 5.20 0.00 0 31 100 2 919.96283 1838.91838 2.11 42.67 5737 5737 MS2 26/42 Linfeng_20120130_CHD1_5.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 517 5.19 0.00 0 9 100 3 825.40509 2474.20072 3.22 36.37 3283 3283 MS2 32/96 Linfeng_20120130_CHD1_3.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 270 5.17 0.00 0 22 100 3 709.99164 2127.96036 4.88 45.73 5890 5890 MS2 26/68 Linfeng_20120130_CHD1_4.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 252 5.16 0.00 0 0 100 2 1064.48376 2127.96025 4.83 45.45 5829 5829 MS2 26/34 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 514 5.15 0.00 0 48 100 2 919.96075 1838.91423 -0.15 44.07 5160 5160 MS2 20/42 Linfeng_20120130_CHD1_2.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 253 5.13 0.00 0 21 100 2 1064.48340 2127.95952 4.48 45.85 5589 5589 MS2 24/34 Linfeng_20120130_CHD1_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 5.10 0.00 0 4 25 2 919.96198 1838.91667 1.18 35.44 3471 3471 MS2 28/42 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 484 5.10 0.00 0 50 100 2 919.95953 1838.91179 -1.48 43.74 5080 5080 MS2 23/42 Linfeng_20120130_CHD1_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 479 5.10 0.00 0 3 29 3 1022.16827 3064.49027 0.32 48.37 5305 5305 MS2 36/104 Linfeng_20120130_CHD1_7.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 204 5.10 0.00 0 3 100 2 1072.47998 2143.95268 3.63 30.47 2722 2722 MS2 24/34 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 349 5.09 0.00 2 5 25 3 733.38739 2198.14762 2.89 41.27 4234 4234 MS2 36/72 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 347 5.09 0.00 2 4 25 3 733.38806 2198.14963 3.81 41.20 4338 4338 MS2 33/72 Linfeng_122411_rIgG_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 327 5.08 0.00 2 16 25 4 642.32629 2566.28335 1.90 29.49 2906 2906 MS2 44/126 Linfeng_122411_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 5.05 0.00 0 3 25 2 919.96283 1838.91838 2.11 35.41 3494 3494 MS2 27/42 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 521 5.05 0.00 0 20 100 3 613.64520 1838.92105 3.56 44.26 5565 5565 MS2 34/84 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 483 5.00 0.00 0 27 100 2 919.95996 1838.91265 -1.01 43.64 5054 5054 MS2 25/42 Linfeng_20120130_CHD1_2.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 200 5.00 0.00 1 12 25 3 715.73328 2145.18528 2.34 41.02 4188 4188 MS2 35/68 Linfeng_122411_rIgG_3.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 472 4.98 0.00 0 1 100 3 1022.17010 3064.49576 2.11 48.31 5667 5667 MS2 39/104 Linfeng_20120130_CHD1_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 4.97 0.00 0 8 25 3 613.64368 1838.91648 1.07 35.42 3469 3469 MS2 42/84 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 482 4.96 0.00 0 11 100 2 919.96472 1838.92217 4.16 45.46 4615 4615 MS2 21/42 Linfeng_20120130_CHD1_7.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 491 4.94 0.00 0 27 100 2 919.96411 1838.92095 3.50 44.72 4205 4205 MS2 22/42 Linfeng_20120130_CHD1_6.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 4.94 0.00 2 3 25 3 733.38702 2198.14652 2.39 41.39 4235 4235 MS2 34/72 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.94 0.00 0 6 100 2 738.39978 1475.79228 4.72 28.89 2094 2094 MS2 20/22 Linfeng_20120130_CHD1_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 394 4.93 0.00 0 0 100 2 1237.60278 2474.19829 2.24 36.25 3800 3800 MS2 26/48 Linfeng_20120130_CHD1_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 505 4.90 0.00 0 36 100 2 919.96460 1838.92192 4.03 45.07 5725 5725 MS2 20/42 Linfeng_20120130_CHD1_1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 503 4.88 0.00 0 24 100 3 825.40527 2474.20127 3.44 39.27 4541 4541 MS2 30/96 Linfeng_20120130_CHD1_4.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 222 4.88 0.00 0 0 100 2 1072.47986 2143.95244 3.52 30.81 2381 2381 MS2 25/34 Linfeng_20120130_CHD1_2.raw High VLYDAEISQIHQSVTDTNVILSmDNSR Unambiguous 1 1 IPI00021304.1 M23(Oxidation) CID 1.0000 0.0000 1 1 472 4.86 0.00 0 24 100 3 1022.16943 3064.49375 1.46 48.33 6761 6761 MS2 36/104 Linfeng_20120130_CHD1_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 487 4.85 0.00 0 30 100 2 919.96497 1838.92266 4.43 46.75 6112 6112 MS2 27/42 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 545 4.85 0.00 1 28 100 3 538.62274 1613.85367 2.65 44.29 6129 6129 MS2 29/52 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 4.85 0.00 0 3 16 3 487.60538 1460.80158 1.36 42.39 4366 4366 MS2 30/44 Linfeng_122411_rIgG_3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 505 4.84 0.00 0 7 100 3 825.40552 2474.20200 3.74 36.19 3943 3943 MS2 34/96 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.83 0.00 0 0 100 2 738.39917 1475.79106 3.89 28.99 2141 2141 MS2 20/22 Linfeng_20120130_CHD1_9.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 4.83 0.00 2 6 25 4 550.29242 2198.14785 3.00 41.19 4337 4337 MS2 46/108 Linfeng_122411_rIgG_4.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 552 4.82 0.00 0 42 100 2 686.36285 1371.71843 5.05 42.27 5119 5119 MS2 19/22 Linfeng_20120130_CHD1_4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 519 4.81 0.00 0 20 100 3 825.40680 2474.20584 5.29 39.77 4644 4644 MS2 29/96 Linfeng_20120130_CHD1_4.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 210 4.81 0.00 0 5 100 2 1072.47925 2143.95122 2.95 30.71 2248 2248 MS2 23/34 Linfeng_20120130_CHD1_3.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 418 4.81 0.00 0 0 100 2 1237.60522 2474.20317 4.21 36.49 4004 4004 MS2 24/48 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 4.80 0.00 2 6 25 3 733.38763 2198.14835 3.22 41.40 4408 4408 MS2 31/72 Linfeng_122411_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 486 4.80 0.00 0 22 100 2 919.96539 1838.92351 4.89 45.47 5012 5012 MS2 22/42 Linfeng_20120130_CHD1_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 509 4.80 0.00 1 34 100 3 538.62366 1613.85642 4.35 46.46 6052 6052 MS2 28/52 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 497 4.79 0.00 0 11 100 2 919.96271 1838.91814 1.97 43.52 5387 5387 MS2 22/42 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 601 4.79 0.00 0 33 100 2 738.39844 1475.78960 2.90 28.08 2376 2376 MS2 20/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 598 4.78 0.00 0 35 100 2 738.39868 1475.79009 3.23 28.29 2292 2292 MS2 20/22 Linfeng_20120130_CHD1_4.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 230 4.77 0.00 0 3 100 2 1072.48145 2143.95561 5.00 30.38 2579 2579 MS2 25/34 Linfeng_20120130_CHD1_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.75 0.00 1 2 5 3 752.68713 2256.04685 0.84 33.89 3276 3276 MS2 31/72 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 548 4.75 0.00 0 3 100 2 686.36292 1371.71855 5.14 41.91 5054 5054 MS2 19/22 Linfeng_20120130_CHD1_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.74 0.00 0 29 25 3 487.60568 1460.80249 1.99 42.44 4539 4539 MS2 30/44 Linfeng_122411_rIgG_6.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 357 4.73 0.00 1 0 100 2 1128.53259 2256.05791 5.74 42.34 5134 5134 MS2 21/36 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 533 4.73 0.00 1 31 100 3 538.62299 1613.85440 3.10 44.39 6151 6151 MS2 31/52 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 454 4.73 0.00 0 3 25 3 487.60330 1460.79535 -2.90 43.28 4952 4952 MS2 30/44 Linfeng_091311_rIgG_1.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 380 4.70 0.00 2 4 17 4 550.29193 2198.14589 2.11 41.38 4234 4234 MS2 45/108 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 591 4.66 0.00 0 5 5 2 738.39948 1475.79167 4.30 26.83 2016 2016 MS2 20/22 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 4.66 0.00 2 0 10 4 550.29083 2198.14150 0.11 41.11 4560 4560 MS2 43/108 Linfeng_122411_rIgG_5.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 506 4.64 0.00 0 5 100 3 825.40466 2474.19944 2.70 36.73 3001 3001 MS2 31/96 Linfeng_20120130_CHD1_6.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 4.64 0.00 0 7 25 3 487.60608 1460.80368 2.80 42.26 4471 4471 MS2 31/44 Linfeng_122411_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 464 4.64 0.00 0 1 12 3 487.60428 1460.79828 -0.90 42.31 4727 4727 MS2 31/44 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 593 4.63 0.00 0 9 100 2 738.39960 1475.79192 4.47 27.87 1967 1967 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.61 0.00 0 34 100 2 738.39941 1475.79155 4.22 28.05 1994 1994 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.60 0.00 0 17 67 2 738.39886 1475.79045 3.48 28.66 2285 2285 MS2 20/22 Linfeng_20120130_CHD1_1.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 356 4.60 0.00 2 10 25 4 550.29218 2198.14687 2.55 41.41 4409 4409 MS2 44/108 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 590 4.59 0.00 0 14 100 2 738.39850 1475.78972 2.98 27.91 2344 2344 MS2 20/22 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 397 4.59 0.00 0 7 13 3 487.60580 1460.80286 2.24 42.47 4387 4387 MS2 31/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.58 0.00 0 25 100 2 738.39893 1475.79057 3.56 28.05 2415 2415 MS2 20/22 Linfeng_20120130_CHD1_8.raw High TSQNSELNNmQDLVEDYK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 245 4.58 0.00 0 8 100 3 715.32220 2143.95206 3.34 30.90 2812 2812 MS2 31/68 Linfeng_20120130_CHD1_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 37 4.57 0.00 0 9 25 2 871.37592 1741.74455 -2.29 18.25 1811 1811 MS2 25/44 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 619 4.57 0.00 0 27 90 2 738.39832 1475.78935 2.73 28.92 2542 2542 MS2 20/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 598 4.57 0.00 0 45 100 2 738.39856 1475.78984 3.06 29.28 2699 2699 MS2 20/22 Linfeng_20120130_CHD1_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 483 4.57 0.00 0 50 100 2 919.96088 1838.91448 -0.02 43.97 4532 4532 MS2 20/42 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.55 0.00 0 14 100 2 738.39905 1475.79082 3.73 25.90 1958 1958 MS2 20/22 Linfeng_20120130_CHD1_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 4.54 0.00 0 38 25 2 919.95673 1838.90618 -4.53 37.32 4437 4437 MS2 28/42 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 614 4.53 0.00 0 15 68 2 738.39832 1475.78935 2.73 25.81 1847 1847 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 594 4.53 0.00 0 34 100 2 738.39960 1475.79192 4.47 28.26 2535 2535 MS2 20/22 Linfeng_20120130_CHD1_10.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 356 4.53 0.00 2 2 25 4 550.29224 2198.14712 2.66 41.26 4233 4233 MS2 44/108 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.52 0.00 0 3 25 3 487.60568 1460.80249 1.99 42.44 3975 3975 MS2 31/44 Linfeng_122411_rIgG_7.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 39 4.51 0.00 0 0 25 2 871.37585 1741.74443 -2.36 18.29 1805 1805 MS2 24/44 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 160 4.51 0.00 1 4 25 3 752.68616 2256.04392 -0.46 33.86 3299 3299 MS2 25/72 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.51 0.00 0 4 74 2 738.39935 1475.79143 4.14 27.84 2208 2208 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 585 4.50 0.00 0 35 100 2 738.39813 1475.78899 2.48 25.70 1828 1828 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 566 4.50 0.00 0 46 100 2 738.39978 1475.79228 4.72 28.33 2546 2546 MS2 20/22 Linfeng_20120130_CHD1_10.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 513 4.50 0.00 1 21 100 2 807.43073 1613.85417 2.96 44.27 6123 6123 MS2 22/26 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 4.50 0.00 0 15 25 3 487.60571 1460.80259 2.05 42.39 4244 4244 MS2 31/44 Linfeng_122411_rIgG_10.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 140 4.49 0.00 1 5 10 3 752.68408 2256.03769 -3.22 34.69 4041 4041 MS2 29/72 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 592 4.48 0.00 0 28 100 2 738.39850 1475.78972 2.98 29.87 2597 2597 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 559 4.48 0.00 0 16 100 2 738.39941 1475.79155 4.22 25.85 1705 1705 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.47 0.00 0 36 100 2 738.39984 1475.79241 4.80 27.96 2178 2178 MS2 20/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 558 4.47 0.00 0 39 100 2 738.39886 1475.79045 3.48 29.47 2657 2657 MS2 19/22 Linfeng_20120130_CHD1_8.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 523 4.47 0.00 0 5 100 3 825.40601 2474.20346 4.33 36.90 3942 3942 MS2 37/96 Linfeng_20120130_CHD1_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 534 4.47 0.00 0 4 100 3 613.64557 1838.92215 4.16 45.90 5927 5927 MS2 36/84 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 491 4.46 0.00 0 40 100 2 919.96429 1838.92131 3.70 47.62 6319 6319 MS2 22/42 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 331 4.46 0.00 0 11 25 3 613.64410 1838.91776 1.77 35.40 3493 3493 MS2 40/84 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 41 4.45 0.00 0 3 25 2 871.37610 1741.74492 -2.08 18.50 1881 1881 MS2 24/44 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 555 4.45 0.00 0 46 100 2 738.39978 1475.79228 4.72 28.82 2011 2011 MS2 20/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 562 4.45 0.00 0 4 8 2 738.39978 1475.79228 4.72 26.64 1964 1964 MS2 20/22 Linfeng_20120130_CHD1_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.45 0.00 1 4 25 3 752.68701 2256.04648 0.68 33.77 3404 3404 MS2 27/72 Linfeng_122411_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 495 4.45 0.00 0 20 100 2 919.96466 1838.92204 4.10 44.88 5850 5850 MS2 24/42 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.44 0.00 0 2 17 2 738.39972 1475.79216 4.64 26.86 1820 1820 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.44 0.00 0 3 28 2 738.39954 1475.79180 4.39 26.97 1896 1896 MS2 20/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.44 0.00 0 32 100 2 738.39880 1475.79033 3.39 28.26 2056 2056 MS2 20/22 Linfeng_20120130_CHD1_9.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 596 4.44 0.00 1 37 100 3 464.56570 1391.68256 1.71 17.65 1189 1189 MS2 27/44 Linfeng_20120130_CHD1_5.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 504 4.44 0.00 0 8 100 3 825.40460 2474.19925 2.63 36.51 4124 4124 MS2 29/96 Linfeng_20120130_CHD1_8.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 461 4.43 0.00 0 0 25 3 487.60388 1460.79709 -1.71 43.38 5214 5214 MS2 30/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 4.42 0.00 2 8 12 3 733.38562 2198.14231 0.48 41.12 4562 4562 MS2 34/72 Linfeng_122411_rIgG_5.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 4.41 0.00 1 13 100 2 1128.53125 2256.05522 4.55 42.40 5146 5146 MS2 20/36 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 4.41 0.00 2 1 25 3 733.38354 2198.13608 -2.36 41.91 5029 5029 MS2 35/72 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 601 4.40 0.00 0 3 68 2 738.39868 1475.79009 3.23 26.87 1856 1856 MS2 20/22 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.39 0.00 0 3 13 2 738.39978 1475.79228 4.72 26.86 2319 2319 MS2 20/22 Linfeng_20120130_CHD1_10.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 498 4.39 0.00 0 20 100 2 919.96387 1838.92046 3.23 45.22 4558 4558 MS2 19/42 Linfeng_20120130_CHD1_7.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 507 4.38 0.00 0 19 100 2 686.36169 1371.71611 3.36 41.04 5041 5041 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 4.38 0.00 0 4 6 2 738.39893 1475.79057 3.56 26.90 2133 2133 MS2 20/22 Linfeng_20120130_CHD1_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 543 4.37 0.00 0 4 100 2 686.36249 1371.71770 4.52 40.89 4860 4860 MS2 19/22 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 487 4.37 0.00 0 0 100 2 919.96088 1838.91448 -0.02 43.30 5532 5532 MS2 24/42 Linfeng_20120130_CHD1_8.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 503 4.36 0.00 0 6 100 3 825.40527 2474.20127 3.44 36.42 3297 3297 MS2 30/96 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 593 4.36 0.00 0 3 43 2 738.39966 1475.79204 4.55 27.00 1820 1820 MS2 20/22 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.32 0.00 0 51 100 2 738.39899 1475.79070 3.64 29.38 2716 2716 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.32 0.00 0 12 100 2 738.39929 1475.79131 4.06 27.87 2475 2475 MS2 20/22 Linfeng_20120130_CHD1_10.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 239 4.32 0.00 0 58 100 2 1064.48608 2127.96489 7.01 45.50 5829 5829 MS2 21/34 Linfeng_20120130_CHD1_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 488 4.28 0.00 0 36 100 2 919.96460 1838.92192 4.03 45.55 5517 5517 MS2 22/42 Linfeng_20120130_CHD1_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 4.28 0.00 0 0 25 2 794.84650 1588.68572 1.42 14.68 1266 1266 MS2 26/38 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 576 4.28 0.00 0 4 14 2 738.39905 1475.79082 3.73 26.85 2233 2233 MS2 20/22 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 524 4.26 0.00 0 9 100 3 825.40485 2474.19999 2.92 36.49 2958 2958 MS2 31/96 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 4.25 0.00 0 34 100 2 738.39880 1475.79033 3.39 29.32 2177 2177 MS2 20/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.25 0.00 0 7 100 2 738.39874 1475.79021 3.31 25.99 1745 1745 MS2 17/22 Linfeng_20120130_CHD1_7.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 511 4.24 0.00 0 12 100 3 825.40576 2474.20273 4.03 36.24 4167 4167 MS2 33/96 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.24 0.00 0 1 100 2 738.39948 1475.79167 4.30 27.65 2132 2132 MS2 20/22 Linfeng_20120130_CHD1_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 566 4.24 0.00 0 3 23 2 597.31396 1193.62065 3.80 28.66 2284 2284 MS2 17/18 Linfeng_20120130_CHD1_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 43 4.23 0.00 0 3 25 2 871.37543 1741.74358 -2.86 18.52 1854 1854 MS2 24/44 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 608 4.23 0.00 0 49 100 2 738.39838 1475.78948 2.82 29.46 2192 2192 MS2 19/22 Linfeng_20120130_CHD1_9.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 164 4.23 0.00 1 1 25 3 752.68634 2256.04447 -0.21 33.92 3160 3160 MS2 29/72 Linfeng_122411_rIgG_10.raw High HGDSLKEIKIEISELNR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 326 4.23 0.00 2 12 25 4 496.02411 1981.07461 1.63 33.50 3253 3253 MS2 42/96 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 568 4.23 0.00 0 3 12 2 597.31396 1193.62065 3.80 28.55 2344 2344 MS2 17/18 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 574 4.22 0.00 0 36 100 2 738.39972 1475.79216 4.64 28.45 2567 2567 MS2 19/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 589 4.21 0.00 0 8 100 2 738.39813 1475.78899 2.48 28.73 2018 2018 MS2 20/22 Linfeng_20120130_CHD1_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 484 4.20 0.00 0 16 100 2 919.96356 1838.91985 2.90 45.28 4812 4812 MS2 22/42 Linfeng_20120130_CHD1_9.raw High VLYDAEISQIHQSVTDTNVILSMDNSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 264 4.20 0.00 0 10 25 4 762.88184 3048.50551 3.66 40.83 4180 4180 MS2 42/156 Linfeng_122411_rIgG_2.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 184 4.20 0.00 1 2 25 3 752.68701 2256.04648 0.68 34.00 3487 3487 MS2 28/72 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 615 4.20 0.00 0 44 100 2 738.39825 1475.78923 2.65 29.42 2186 2186 MS2 19/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 616 4.19 0.00 0 27 100 2 738.39832 1475.78935 2.73 28.48 2488 2488 MS2 20/22 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 611 4.18 0.00 0 1 30 2 738.39777 1475.78826 1.99 28.85 2403 2403 MS2 20/22 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 550 4.18 0.00 1 35 100 3 464.56622 1391.68412 2.83 17.95 1213 1213 MS2 25/44 Linfeng_20120130_CHD1_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 496 4.17 0.00 0 33 100 2 919.96405 1838.92082 3.43 44.79 4869 4869 MS2 19/42 Linfeng_20120130_CHD1_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 482 4.16 0.00 0 22 100 2 919.96375 1838.92021 3.10 46.76 6762 6762 MS2 20/42 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.15 0.00 0 41 100 2 738.39984 1475.79241 4.80 28.31 2544 2544 MS2 19/22 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 534 4.15 0.00 0 2 46 2 597.31464 1193.62200 4.92 28.43 2251 2251 MS2 17/18 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.14 0.00 0 9 100 2 738.39929 1475.79131 4.06 25.63 1837 1837 MS2 19/22 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 542 4.14 0.00 0 17 100 2 686.36206 1371.71684 3.90 41.28 3721 3721 MS2 18/22 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.13 0.00 0 2 100 2 738.39978 1475.79228 4.72 27.96 1905 1905 MS2 20/22 Linfeng_20120130_CHD1_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 473 4.12 0.00 0 2 25 3 487.60379 1460.79682 -1.90 43.60 5173 5173 MS2 30/44 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 486 4.12 0.00 0 44 100 2 919.96509 1838.92290 4.56 45.65 4660 4660 MS2 19/42 Linfeng_20120130_CHD1_7.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 563 4.12 0.00 0 11 100 2 686.36267 1371.71807 4.79 41.64 4897 4897 MS2 19/22 Linfeng_20120130_CHD1_1.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 494 4.11 0.00 0 11 100 3 825.40546 2474.20182 3.66 36.14 3380 3380 MS2 29/96 Linfeng_20120130_CHD1_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 582 4.11 0.00 1 41 100 3 464.56595 1391.68329 2.24 18.25 1145 1145 MS2 23/44 Linfeng_20120130_CHD1_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 470 4.11 0.00 0 59 25 3 487.60373 1460.79663 -2.02 43.65 5153 5153 MS2 29/44 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 4.10 0.00 2 32 25 4 550.29175 2198.14516 1.77 41.53 4181 4181 MS2 40/108 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 579 4.10 0.00 0 31 100 2 738.39862 1475.78996 3.15 25.67 1823 1823 MS2 17/22 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 316 4.10 0.00 2 27 25 4 642.32416 2566.27480 -1.43 29.03 2900 2900 MS2 40/126 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.09 0.00 0 46 100 2 738.39868 1475.79009 3.23 30.57 2742 2742 MS2 20/22 Linfeng_20120130_CHD1_4.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 58 4.09 0.00 0 9 25 2 794.84430 1588.68132 -1.35 14.69 1335 1335 MS2 27/38 Linfeng_091311_rIgG_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 554 4.08 0.00 0 14 100 2 686.36255 1371.71782 4.61 41.11 4449 4449 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.08 0.00 0 7 100 2 738.39905 1475.79082 3.73 27.86 2385 2385 MS2 20/22 Linfeng_20120130_CHD1_8.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 138 4.08 0.00 1 14 25 3 752.68414 2256.03788 -3.14 34.55 4075 4075 MS2 27/72 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 591 4.07 0.00 0 25 100 2 738.39862 1475.78996 3.15 30.15 2655 2655 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.06 0.00 0 7 100 2 738.39880 1475.79033 3.39 27.98 2017 2017 MS2 19/22 Linfeng_20120130_CHD1_9.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 505 4.05 0.00 0 10 100 3 825.40570 2474.20255 3.96 37.17 3598 3598 MS2 33/96 Linfeng_20120130_CHD1_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 513 4.05 0.00 0 13 100 3 825.40582 2474.20292 4.11 37.18 4355 4355 MS2 27/96 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.04 0.00 0 47 100 2 738.39929 1475.79131 4.06 29.55 2436 2436 MS2 20/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 535 4.04 0.00 0 18 100 2 738.39911 1475.79094 3.81 25.96 1807 1807 MS2 18/22 Linfeng_20120130_CHD1_9.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 4.03 0.00 0 38 25 2 919.95984 1838.91240 -1.15 58.60 6931 6931 MS2 22/42 Linfeng_091311_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 495 4.03 0.00 0 13 100 3 825.40546 2474.20182 3.66 40.02 4693 4693 MS2 29/96 Linfeng_20120130_CHD1_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 336 4.03 0.00 0 15 25 2 730.90558 1460.80388 2.94 42.44 4383 4383 MS2 19/22 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 471 4.03 0.00 1 35 100 2 807.43170 1613.85613 4.17 46.17 5990 5990 MS2 21/26 Linfeng_20120130_CHD1_4.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High TSQNSELNNMQDLVEDYK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 260 4.02 0.00 0 15 100 3 709.99133 2127.95945 4.45 45.99 5948 5948 MS2 26/68 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 564 4.02 0.00 0 3 12 2 597.31384 1193.62041 3.59 28.51 2336 2336 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.02 0.00 0 3 15 2 738.39905 1475.79082 3.73 26.94 1778 1778 MS2 20/22 Linfeng_20120130_CHD1_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 313 4.02 0.00 1 18 25 3 464.56396 1391.67734 -2.04 18.01 1783 1783 MS2 23/44 Linfeng_091311_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 4.01 0.00 1 10 25 3 538.62213 1613.85184 1.51 34.68 3376 3376 MS2 29/52 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 627 4.01 0.00 0 6 100 2 738.39832 1475.78935 2.73 28.02 1921 1921 MS2 18/22 Linfeng_20120130_CHD1_7.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 514 4.01 0.00 0 15 100 3 825.40662 2474.20530 5.07 36.11 3927 3927 MS2 28/96 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 395 4.01 0.00 1 12 11 3 538.62000 1613.84543 -2.46 35.47 4142 4142 MS2 30/52 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 573 4.00 0.00 0 3 23 2 597.31360 1193.61992 3.18 28.72 2499 2499 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 4.00 0.00 0 7 13 3 457.90704 1371.70658 -3.59 34.61 4083 4083 MS2 30/44 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 402 4.00 0.00 0 3 45 2 665.32642 1329.64556 4.63 28.40 2245 2245 MS2 19/22 Linfeng_20120130_CHD1_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 40 3.99 0.00 0 1 25 2 871.37573 1741.74419 -2.51 18.42 1862 1862 MS2 25/44 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 135 3.96 0.00 0 4 25 5 819.22290 4092.08540 3.07 43.40 4497 4497 MS2 52/344 Linfeng_122411_rIgG_3.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 60 3.96 0.00 0 7 25 2 794.84485 1588.68242 -0.66 14.93 1357 1357 MS2 28/38 Linfeng_091311_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 3.95 0.00 0 3 11 2 665.32593 1329.64458 3.89 28.20 2273 2273 MS2 19/22 Linfeng_20120130_CHD1_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 103 3.95 0.00 0 6 3 3 440.86609 1320.58371 0.61 3.14 291 291 MS2 31/60 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 550 3.95 0.00 0 12 100 2 686.36115 1371.71501 2.56 41.23 3568 3568 MS2 17/22 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 572 3.95 0.00 0 2 37 2 597.31360 1193.61992 3.18 28.36 2236 2236 MS2 17/18 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 560 3.94 0.00 0 65 100 2 686.36230 1371.71733 4.25 42.77 5221 5221 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 3.94 0.00 1 6 25 3 652.67395 1956.00730 2.01 41.78 4300 4300 MS2 31/64 Linfeng_122411_rIgG_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.93 0.00 0 11 100 2 686.36218 1371.71709 4.07 41.14 4025 4025 MS2 20/22 Linfeng_20120130_CHD1_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 97 3.93 0.00 0 3 3 3 440.86584 1320.58298 0.05 3.25 328 328 MS2 34/60 Linfeng_122411_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 90 3.93 0.00 0 5 14 3 440.86465 1320.57941 -2.65 20.13 1817 1817 MS2 33/60 Linfeng_091311_rIgG_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.93 0.00 0 18 25 3 440.86478 1320.57978 -2.37 21.78 2303 2303 MS2 30/60 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 3.92 0.00 0 3 25 3 487.60556 1460.80213 1.74 42.65 4323 4323 MS2 29/44 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 337 3.90 0.00 1 4 8 3 464.56360 1391.67624 -2.83 17.79 1735 1735 MS2 30/44 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 587 3.90 0.00 0 37 100 2 738.39819 1475.78911 2.57 29.60 2443 2443 MS2 20/22 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 515 3.90 0.00 0 34 100 2 686.36169 1371.71611 3.36 40.65 5259 5259 MS2 19/22 Linfeng_20120130_CHD1_5.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 463 3.90 0.00 1 17 100 2 807.43134 1613.85539 3.71 46.25 6009 6009 MS2 21/26 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 330 3.88 0.00 0 17 25 3 613.64417 1838.91794 1.87 36.49 3630 3630 MS2 36/84 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 404 3.88 0.00 1 20 13 3 538.61920 1613.84305 -3.93 35.39 4186 4186 MS2 30/52 Linfeng_091311_rIgG_2.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 284 3.87 0.00 1 4 100 2 1136.52686 2272.04643 2.89 27.20 2090 2090 MS2 18/36 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 557 3.86 0.00 0 10 100 2 686.36230 1371.71733 4.25 40.75 4713 4713 MS2 18/22 Linfeng_20120130_CHD1_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 147 3.86 0.00 1 5 25 3 752.68445 2256.03879 -2.73 34.85 4044 4044 MS2 27/72 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 65 3.86 0.00 0 3 25 2 794.84576 1588.68425 0.50 14.31 1243 1243 MS2 28/38 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 601 3.86 0.00 0 8 100 2 597.31360 1193.61992 3.18 27.52 2150 2150 MS2 16/18 Linfeng_20120130_CHD1_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 3.86 0.00 0 5 100 2 627.80969 1254.61211 3.78 18.42 1190 1190 MS2 19/26 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 380 3.85 0.00 0 65 100 2 665.32568 1329.64409 3.53 29.11 2363 2363 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 560 3.85 0.00 0 8 100 2 686.36267 1371.71807 4.79 41.12 4176 4176 MS2 18/22 Linfeng_20120130_CHD1_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.85 0.00 0 5 15 3 457.90869 1371.71152 0.01 33.49 3104 3104 MS2 30/44 Linfeng_122411_rIgG_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 3.85 0.00 0 7 25 3 457.90768 1371.70850 -2.19 34.65 4035 4035 MS2 29/44 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 567 3.85 0.00 0 3 12 2 597.31348 1193.61968 2.98 29.41 2511 2511 MS2 17/18 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 537 3.85 0.00 0 2 72 2 597.31323 1193.61919 2.57 28.86 2126 2126 MS2 17/18 Linfeng_20120130_CHD1_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 3.84 0.00 0 64 100 2 665.32635 1329.64543 4.54 28.12 1926 1926 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 3.84 0.00 0 7 100 2 665.32568 1329.64409 3.53 30.21 2667 2667 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 563 3.84 0.00 0 3 71 2 597.31433 1193.62139 4.41 28.90 2637 2637 MS2 17/18 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 572 3.83 0.00 0 3 56 2 597.31360 1193.61992 3.18 31.12 2856 2856 MS2 17/18 Linfeng_20120130_CHD1_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 47 3.83 0.00 0 0 25 2 871.37659 1741.74590 -1.52 18.49 1800 1800 MS2 23/44 Linfeng_091311_rIgG_5.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 390 3.83 0.00 0 3 100 2 627.80963 1254.61199 3.68 20.81 1657 1657 MS2 19/26 Linfeng_20120130_CHD1_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 47 3.82 0.00 0 27 25 2 871.37769 1741.74809 -0.26 18.57 1607 1607 MS2 22/44 Linfeng_091311_rIgG_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 286 3.81 0.00 0 30 25 2 919.95844 1838.90959 -2.67 37.25 4371 4371 MS2 25/42 Linfeng_091311_rIgG_4.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 297 3.81 0.00 1 0 100 2 1136.52698 2272.04668 3.00 27.27 2106 2106 MS2 18/36 Linfeng_20120130_CHD1_4.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 125 3.81 0.00 1 7 25 3 630.95630 1890.85434 -1.80 17.49 1693 1693 MS2 30/88 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 569 3.80 0.00 0 2 45 2 597.31372 1193.62016 3.39 31.04 2840 2840 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 562 3.80 0.00 0 26 100 2 738.39905 1475.79082 3.73 34.94 3694 3694 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 461 3.80 0.00 0 9 25 3 487.60431 1460.79837 -0.83 43.50 5163 5163 MS2 30/44 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 550 3.80 0.00 0 3 9 2 597.31311 1193.61894 2.36 29.29 2486 2486 MS2 17/18 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.80 0.00 0 4 65 2 597.31451 1193.62175 4.72 28.29 2228 2228 MS2 17/18 Linfeng_20120130_CHD1_1.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 457 3.79 0.00 0 66 25 3 487.60355 1460.79609 -2.40 43.72 5155 5155 MS2 28/44 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 3.79 0.00 0 2 53 2 597.31378 1193.62029 3.49 29.02 2033 2033 MS2 17/18 Linfeng_20120130_CHD1_3.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 391 3.79 0.00 1 4 100 3 758.02081 2272.04789 3.53 28.04 2243 2243 MS2 22/72 Linfeng_20120130_CHD1_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 104 3.79 0.00 0 34 25 3 440.86707 1320.58664 2.83 20.89 1672 1672 MS2 29/60 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.79 0.00 1 4 11 3 538.62213 1613.85184 1.51 34.65 3399 3399 MS2 29/52 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.79 0.00 0 4 9 2 597.31403 1193.62078 3.90 29.11 2456 2456 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 3.79 0.00 0 48 100 2 665.32581 1329.64433 3.71 29.03 2350 2350 MS2 19/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.79 0.00 0 4 85 2 597.31390 1193.62053 3.69 29.78 2579 2579 MS2 17/18 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 538 3.78 0.00 0 3 82 2 597.31439 1193.62151 4.51 29.19 2137 2137 MS2 17/18 Linfeng_20120130_CHD1_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 192 3.78 0.00 0 35 100 3 440.86740 1320.58765 3.59 23.95 1598 1598 MS2 30/60 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 592 3.78 0.00 0 36 100 2 738.39844 1475.78960 2.90 29.35 2038 2038 MS2 16/22 Linfeng_20120130_CHD1_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.78 0.00 0 3 32 2 665.32507 1329.64287 2.61 28.50 2459 2459 MS2 19/22 Linfeng_20120130_CHD1_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 563 3.78 0.00 0 7 100 2 597.31415 1193.62102 4.10 31.30 2891 2891 MS2 17/18 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 551 3.77 0.00 1 33 100 3 464.56616 1391.68393 2.70 18.07 1127 1127 MS2 23/44 Linfeng_20120130_CHD1_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 3.77 0.00 0 6 25 3 443.88522 1329.64112 1.29 28.09 2721 2721 MS2 28/44 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 3.77 0.00 0 11 100 2 738.39935 1475.79143 4.14 25.93 1678 1678 MS2 19/22 Linfeng_20120130_CHD1_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 3.76 0.00 0 6 25 3 443.88559 1329.64222 2.12 27.46 2579 2579 MS2 30/44 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 3.76 0.00 0 3 10 2 597.31396 1193.62065 3.80 29.17 2465 2465 MS2 17/18 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 257 3.75 0.00 0 3 25 2 665.32452 1329.64177 1.78 28.08 2720 2720 MS2 19/22 Linfeng_122411_rIgG_6.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 572 3.75 0.00 1 32 100 3 464.56647 1391.68485 3.35 17.67 1165 1165 MS2 22/44 Linfeng_20120130_CHD1_1.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 3.75 0.00 2 2 25 4 550.28894 2198.13393 -3.33 41.86 5022 5022 MS2 39/108 Linfeng_091311_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 509 3.75 0.00 0 3 100 3 825.40387 2474.19706 1.74 37.20 3069 3069 MS2 31/96 Linfeng_20120130_CHD1_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 3.74 0.00 0 19 100 2 627.80841 1254.60954 1.73 20.73 1416 1416 MS2 19/26 Linfeng_20120130_CHD1_5.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 300 3.74 0.00 1 6 100 2 1136.52698 2272.04668 3.00 27.27 2075 2075 MS2 15/36 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 553 3.74 0.00 1 9 100 3 464.56607 1391.68366 2.50 17.94 1151 1151 MS2 27/44 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 546 3.74 0.00 0 4 7 2 597.31311 1193.61894 2.36 29.20 2469 2469 MS2 17/18 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 554 3.74 0.00 0 6 100 2 597.31439 1193.62151 4.51 27.76 2149 2149 MS2 17/18 Linfeng_20120130_CHD1_1.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.74 0.00 1 28 25 3 538.62231 1613.85239 1.85 34.99 3610 3610 MS2 29/52 Linfeng_122411_rIgG_6.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 331 3.73 0.00 1 23 25 3 464.56354 1391.67606 -2.96 17.98 1748 1748 MS2 26/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 528 3.73 0.00 0 11 100 2 738.39978 1475.79228 4.72 25.85 2163 2163 MS2 19/22 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 585 3.73 0.00 0 18 100 2 597.31335 1193.61943 2.77 29.88 2238 2238 MS2 17/18 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 363 3.72 0.00 1 12 25 3 652.67395 1956.00730 2.01 41.72 4449 4449 MS2 32/64 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 573 3.72 0.00 0 41 100 2 738.39899 1475.79070 3.64 28.24 2531 2531 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 613 3.72 0.00 0 25 100 2 738.39783 1475.78838 2.07 28.79 1985 1985 MS2 16/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 504 3.72 0.00 0 76 100 3 825.40393 2474.19724 1.81 36.76 4369 4369 MS2 28/96 Linfeng_20120130_CHD1_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 530 3.72 0.00 0 2 100 2 597.31439 1193.62151 4.51 27.94 2176 2176 MS2 17/18 Linfeng_20120130_CHD1_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 380 3.72 0.00 0 3 100 2 627.80920 1254.61113 3.00 20.76 1376 1376 MS2 19/26 Linfeng_20120130_CHD1_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.71 0.00 0 65 100 2 665.32642 1329.64556 4.63 27.39 2092 2092 MS2 19/22 Linfeng_20120130_CHD1_1.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 60 3.71 0.00 0 18 25 2 794.84540 1588.68352 0.04 14.58 1358 1358 MS2 24/38 Linfeng_091311_rIgG_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 294 3.71 0.00 0 4 24 3 443.88535 1329.64148 1.57 27.07 2412 2412 MS2 27/44 Linfeng_122411_rIgG_2.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.71 0.00 1 15 25 3 652.67328 1956.00528 0.98 41.83 4292 4292 MS2 30/64 Linfeng_122411_rIgG_3.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.71 0.00 0 3 25 2 870.85547 1740.70366 -1.13 17.40 1692 1692 MS2 27/38 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 575 3.71 0.00 0 2 80 2 597.31366 1193.62004 3.29 28.05 2191 2191 MS2 16/18 Linfeng_20120130_CHD1_1.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 373 3.71 0.00 1 15 100 3 758.01941 2272.04367 1.68 26.74 2103 2103 MS2 25/72 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 583 3.70 0.00 0 7 100 2 597.31421 1193.62114 4.21 27.63 2129 2129 MS2 17/18 Linfeng_20120130_CHD1_1.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 325 3.69 0.00 0 32 25 3 613.64258 1838.91318 -0.72 35.87 3669 3669 MS2 34/84 Linfeng_122411_rIgG_4.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 11 3.69 0.00 0 0 25 2 870.85333 1740.69939 -3.59 17.67 1798 1798 MS2 26/38 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 3.69 0.00 0 65 100 2 665.32623 1329.64519 4.35 27.78 1952 1952 MS2 19/22 Linfeng_20120130_CHD1_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 291 3.69 0.00 0 66 25 2 919.96191 1838.91655 1.11 58.13 6767 6767 MS2 18/42 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 134 3.69 0.00 1 3 25 3 752.68396 2256.03733 -3.38 34.57 4033 4033 MS2 27/72 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 3.69 0.00 0 12 25 3 443.88556 1329.64212 2.05 27.04 2380 2380 MS2 27/44 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 477 3.68 0.00 1 22 100 2 807.43085 1613.85442 3.11 45.89 5921 5921 MS2 22/26 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.68 0.00 0 2 97 2 597.31409 1193.62090 4.00 27.81 2202 2202 MS2 17/18 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.68 0.00 1 21 25 3 538.62103 1613.84854 -0.53 4.65 495 495 MS2 29/52 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 128 3.67 0.00 0 13 100 2 871.38092 1741.75456 3.45 14.81 977 977 MS2 21/44 Linfeng_20120130_CHD1_1.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 43 3.67 0.00 0 4 25 2 871.37622 1741.74516 -1.94 18.54 1826 1826 MS2 25/44 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 3.67 0.00 0 17 100 2 597.31348 1193.61968 2.98 29.79 2218 2218 MS2 16/18 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 533 3.67 0.00 0 2 87 2 597.31451 1193.62175 4.72 28.16 2208 2208 MS2 17/18 Linfeng_20120130_CHD1_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 560 3.67 0.00 0 3 100 2 597.31311 1193.61894 2.36 28.68 2518 2518 MS2 17/18 Linfeng_20120130_CHD1_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 3.67 0.00 0 2 100 2 597.31415 1193.62102 4.10 28.11 2202 2202 MS2 17/18 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 3.67 0.00 0 2 13 2 686.35944 1371.71160 0.07 33.48 3103 3103 MS2 20/22 Linfeng_122411_rIgG_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.66 0.00 0 7 13 2 686.35675 1371.70622 -3.85 34.49 4068 4068 MS2 20/22 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 3.66 0.00 0 22 25 2 665.32489 1329.64250 2.33 27.01 2403 2403 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 569 3.65 0.00 0 4 100 2 597.31427 1193.62126 4.31 28.00 2184 2184 MS2 17/18 Linfeng_20120130_CHD1_1.raw High HGDSLKEIKIEISELNR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 3.65 0.00 2 17 25 4 496.02448 1981.07607 2.37 33.54 3231 3231 MS2 38/96 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 544 3.65 0.00 0 21 100 2 597.31445 1193.62163 4.61 30.83 2385 2385 MS2 17/18 Linfeng_20120130_CHD1_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 236 3.65 0.00 0 4 6 2 665.32349 1329.63970 0.22 4.42 488 488 MS2 19/22 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 544 3.65 0.00 0 6 100 2 597.31439 1193.62151 4.51 27.67 2134 2134 MS2 17/18 Linfeng_20120130_CHD1_1.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 117 3.65 0.00 1 6 25 3 630.95599 1890.85343 -2.29 17.72 1744 1744 MS2 33/88 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 407 3.63 0.00 0 2 100 2 665.32617 1329.64507 4.26 28.91 2096 2096 MS2 19/22 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.63 0.00 0 4 100 2 597.31299 1193.61870 2.16 29.29 2063 2063 MS2 17/18 Linfeng_20120130_CHD1_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 595 3.63 0.00 0 16 100 2 597.31342 1193.61955 2.88 28.14 1932 1932 MS2 15/18 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 334 3.63 0.00 1 20 25 3 464.56357 1391.67615 -2.90 17.66 1728 1728 MS2 27/44 Linfeng_091311_rIgG_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 3.63 0.00 0 5 2 2 627.80719 1254.60710 -0.21 4.33 474 474 MS2 22/26 Linfeng_122411_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 258 3.63 0.00 0 11 25 3 443.88370 1329.63654 -2.15 28.90 3279 3279 MS2 26/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 462 3.61 0.00 0 0 25 3 487.60269 1460.79352 -4.16 43.66 5139 5139 MS2 29/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 573 3.61 0.00 0 12 100 2 597.31396 1193.62065 3.80 29.64 2200 2200 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 3.61 0.00 0 37 5 3 443.88486 1329.64002 0.46 4.43 490 490 MS2 30/44 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 583 3.61 0.00 0 3 79 2 597.31384 1193.62041 3.59 30.80 2790 2790 MS2 17/18 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 3.61 0.00 0 49 100 2 665.32562 1329.64397 3.43 30.25 2677 2677 MS2 18/22 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 352 3.60 0.00 0 53 100 2 665.32581 1329.64433 3.71 29.48 2526 2526 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.60 0.00 1 6 25 3 464.56409 1391.67771 -1.78 18.03 1733 1733 MS2 25/44 Linfeng_091311_rIgG_5.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 53 3.59 0.00 0 23 25 2 871.38098 1741.75469 3.52 17.34 1410 1410 MS2 23/44 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 527 3.59 0.00 1 34 100 3 538.62317 1613.85495 3.44 47.19 6215 6215 MS2 26/52 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.59 0.00 0 4 25 2 665.32495 1329.64263 2.43 27.03 2379 2379 MS2 19/22 Linfeng_122411_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 374 3.59 0.00 0 6 22 2 686.35730 1371.70732 -3.05 34.82 4041 4041 MS2 20/22 Linfeng_091311_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.59 0.00 0 3 25 2 870.85565 1740.70403 -0.92 17.71 1709 1709 MS2 26/38 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.58 0.00 0 5 25 2 665.32214 1329.63701 -1.80 28.84 3278 3278 MS2 19/22 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 251 3.58 0.00 0 19 25 2 665.32452 1329.64177 1.78 27.40 2572 2572 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.57 0.00 0 2 100 2 665.32562 1329.64397 3.43 29.90 2605 2605 MS2 19/22 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 3.57 0.00 0 4 23 2 597.31409 1193.62090 4.00 29.46 2520 2520 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.57 0.00 0 12 25 3 440.86517 1320.58097 -1.47 21.51 2265 2265 MS2 33/60 Linfeng_091311_rIgG_3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 59 3.57 0.00 0 4 25 2 871.38074 1741.75420 3.24 17.43 1406 1406 MS2 21/44 Linfeng_122411_rIgG_6.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 393 3.57 0.00 1 4 22 3 538.62000 1613.84543 -2.46 35.44 4147 4147 MS2 31/52 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 583 3.57 0.00 0 3 100 2 597.31378 1193.62029 3.49 27.86 2162 2162 MS2 17/18 Linfeng_20120130_CHD1_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 91 3.56 0.00 0 13 25 3 440.86508 1320.58069 -1.68 21.53 2261 2261 MS2 31/60 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 3.56 0.00 0 44 100 2 738.39911 1475.79094 3.81 28.28 1950 1950 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 3.56 0.00 0 3 31 2 597.31335 1193.61943 2.77 29.23 2609 2609 MS2 17/18 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 557 3.55 0.00 0 10 100 2 597.31317 1193.61907 2.47 30.48 2859 2859 MS2 17/18 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 248 3.55 0.00 0 4 25 2 665.32361 1329.63994 0.41 26.67 2574 2574 MS2 19/22 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 509 3.55 0.00 0 19 100 2 686.36169 1371.71611 3.36 41.07 5029 5029 MS2 16/22 Linfeng_20120130_CHD1_8.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 55 3.54 0.00 0 0 25 2 794.84412 1588.68096 -1.58 14.59 1325 1325 MS2 21/38 Linfeng_091311_rIgG_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 567 3.54 0.00 0 3 100 2 597.31378 1193.62029 3.49 29.15 2017 2017 MS2 17/18 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 410 3.54 0.00 0 49 100 2 665.32440 1329.64153 1.60 27.48 2252 2252 MS2 19/22 Linfeng_20120130_CHD1_5.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.53 0.00 0 4 25 2 870.85486 1740.70244 -1.83 17.47 1727 1727 MS2 26/38 Linfeng_091311_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 334 3.53 0.00 1 35 25 3 464.56332 1391.67542 -3.42 17.70 1759 1759 MS2 26/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 405 3.53 0.00 1 19 25 3 538.62231 1613.85239 1.85 34.66 3517 3517 MS2 29/52 Linfeng_122411_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 260 3.53 0.00 0 11 25 3 443.88354 1329.63608 -2.50 28.85 3279 3279 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 3.53 0.00 0 7 100 2 730.90668 1460.80608 4.44 11.25 751 751 MS2 17/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 265 3.52 0.00 0 9 7 3 443.88333 1329.63544 -2.98 29.08 3036 3036 MS2 28/44 Linfeng_091311_rIgG_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 3.52 0.00 0 5 25 2 665.32147 1329.63567 -2.81 28.98 3022 3022 MS2 19/22 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.52 0.00 0 2 11 2 686.35687 1371.70647 -3.67 34.54 4029 4029 MS2 20/22 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 229 3.52 0.00 0 6 25 2 665.32184 1329.63640 -2.26 29.21 3292 3292 MS2 19/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 358 3.52 0.00 0 64 100 2 665.32574 1329.64421 3.62 27.11 2069 2069 MS2 19/22 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 579 3.51 0.00 0 19 100 2 597.31421 1193.62114 4.21 29.68 2458 2458 MS2 17/18 Linfeng_20120130_CHD1_1.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 379 3.51 0.00 1 76 100 3 758.01996 2272.04532 2.40 26.86 2020 2020 MS2 21/72 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.51 0.00 0 2 100 2 665.32532 1329.64336 2.98 29.24 2480 2480 MS2 19/22 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 362 3.51 0.00 0 70 100 2 665.32556 1329.64385 3.34 27.90 2007 2007 MS2 19/22 Linfeng_20120130_CHD1_9.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 77 3.50 0.00 0 17 25 2 660.79456 1320.58183 -0.82 21.59 2269 2269 MS2 25/30 Linfeng_091311_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 86 3.50 0.00 0 11 18 3 440.86453 1320.57904 -2.93 21.50 2293 2293 MS2 32/60 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 171 3.50 0.00 0 38 100 3 440.86688 1320.58609 2.41 23.55 1554 1554 MS2 30/60 Linfeng_20120130_CHD1_4.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 3.50 0.00 0 2 25 2 870.85522 1740.70317 -1.41 17.75 1748 1748 MS2 27/38 Linfeng_091311_rIgG_6.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 68 3.50 0.00 0 41 25 3 440.86343 1320.57575 -5.42 21.78 2342 2342 MS2 32/60 Linfeng_091311_rIgG_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 3.50 0.00 0 6 100 2 597.31342 1193.61955 2.88 30.76 2253 2253 MS2 16/18 Linfeng_20120130_CHD1_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 80 3.50 0.00 0 10 25 2 660.79407 1320.58086 -1.55 21.63 2281 2281 MS2 22/30 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 576 3.50 0.00 0 3 100 2 597.31403 1193.62078 3.90 28.58 2505 2505 MS2 16/18 Linfeng_20120130_CHD1_8.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 3.49 0.00 1 7 100 3 752.68982 2256.05490 4.41 42.26 5117 5117 MS2 23/72 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 455 3.49 0.00 0 12 100 2 730.90759 1460.80791 5.69 2.21 167 167 MS2 17/22 Linfeng_20120130_CHD1_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 223 3.49 0.00 0 12 25 2 665.32166 1329.63603 -2.53 29.15 3249 3249 MS2 19/22 Linfeng_091311_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 259 3.49 0.00 0 9 25 3 443.88358 1329.63617 -2.43 29.19 3307 3307 MS2 28/44 Linfeng_091311_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 549 3.49 0.00 0 15 100 2 597.31329 1193.61931 2.67 30.24 2804 2804 MS2 17/18 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 427 3.48 0.00 0 8 6 2 730.90302 1460.79875 -0.57 42.29 4724 4724 MS2 18/22 Linfeng_122411_rIgG_5.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.48 0.00 0 6 3 2 686.35663 1371.70598 -4.02 34.70 3790 3790 MS2 20/22 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 3.48 0.00 0 15 100 2 597.31305 1193.61882 2.26 27.79 2460 2460 MS2 17/18 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 87 3.48 0.00 0 9 25 3 440.86441 1320.57868 -3.21 21.89 2289 2289 MS2 32/60 Linfeng_091311_rIgG_7.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.48 0.00 0 0 25 2 870.85455 1740.70183 -2.18 17.70 1766 1766 MS2 26/38 Linfeng_091311_rIgG_8.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 497 3.48 0.00 0 14 100 3 825.40430 2474.19834 2.26 35.75 4137 4137 MS2 27/96 Linfeng_20120130_CHD1_5.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 535 3.48 0.00 0 41 100 3 613.64392 1838.91721 1.47 43.96 5492 5492 MS2 28/84 Linfeng_20120130_CHD1_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 251 3.48 0.00 0 12 13 2 627.80725 1254.60723 -0.12 3.24 305 305 MS2 21/26 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 497 3.48 0.00 1 21 100 2 807.43182 1613.85637 4.32 46.45 6210 6210 MS2 20/26 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 575 3.47 0.00 0 15 100 2 597.31396 1193.62065 3.80 30.90 2670 2670 MS2 16/18 Linfeng_20120130_CHD1_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 575 3.47 0.00 0 18 100 2 597.31366 1193.62004 3.29 30.99 2406 2406 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.47 0.00 0 3 100 2 597.31421 1193.62114 4.21 29.31 2152 2152 MS2 17/18 Linfeng_20120130_CHD1_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 344 3.47 0.00 0 61 25 2 730.90558 1460.80388 2.94 42.49 4139 4139 MS2 18/22 Linfeng_122411_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 226 3.47 0.00 0 6 25 2 665.32208 1329.63689 -1.89 28.85 3273 3273 MS2 19/22 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 284 3.47 0.00 0 10 25 3 443.88489 1329.64011 0.53 26.67 2575 2575 MS2 28/44 Linfeng_122411_rIgG_5.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 3.47 0.00 0 63 100 2 665.32629 1329.64531 4.44 29.13 2049 2049 MS2 19/22 Linfeng_20120130_CHD1_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 591 3.47 0.00 0 10 100 2 597.31409 1193.62090 4.00 29.71 2208 2208 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 357 3.47 0.00 0 24 25 2 730.90479 1460.80229 1.85 42.37 3967 3967 MS2 19/22 Linfeng_122411_rIgG_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 405 3.46 0.00 0 47 100 2 665.32617 1329.64507 4.26 27.89 1970 1970 MS2 19/22 Linfeng_20120130_CHD1_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 387 3.46 0.00 0 5 25 2 686.35986 1371.71245 0.69 33.70 3279 3279 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.45 0.00 0 66 100 2 665.32526 1329.64324 2.88 27.72 1944 1944 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.45 0.00 0 24 25 2 730.90167 1460.79607 -2.41 43.26 5200 5200 MS2 19/22 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 3.45 0.00 0 65 100 2 665.32599 1329.64470 3.99 27.15 2078 2078 MS2 19/22 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 555 3.44 0.00 0 15 100 2 597.31317 1193.61907 2.47 30.35 2830 2830 MS2 17/18 Linfeng_20120130_CHD1_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 579 3.44 0.00 0 13 100 2 597.31427 1193.62126 4.31 29.51 2428 2428 MS2 16/18 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 3.44 0.00 0 31 25 2 665.32166 1329.63603 -2.53 29.15 3282 3282 MS2 19/22 Linfeng_091311_rIgG_9.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.44 0.00 0 3 16 2 627.80524 1254.60320 -3.33 22.33 2410 2410 MS2 23/26 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 568 3.44 0.00 0 2 80 2 597.31433 1193.62139 4.41 28.80 2083 2083 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 408 3.42 0.00 0 63 100 2 665.32605 1329.64482 4.08 29.08 2358 2358 MS2 18/22 Linfeng_20120130_CHD1_1.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 3.42 0.00 0 4 11 2 730.90198 1460.79668 -1.99 43.19 4941 4941 MS2 19/22 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 566 3.42 0.00 0 18 100 2 597.31323 1193.61919 2.57 28.01 2406 2406 MS2 16/18 Linfeng_20120130_CHD1_8.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 353 3.42 0.00 0 5 10 2 686.35754 1371.70781 -2.69 34.60 4028 4028 MS2 20/22 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 562 3.41 0.00 0 11 100 2 597.31415 1193.62102 4.10 29.74 2212 2212 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 582 3.41 0.00 0 23 100 2 597.31384 1193.62041 3.59 29.74 2777 2777 MS2 15/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 593 3.40 0.00 0 6 100 2 597.31372 1193.62016 3.39 27.89 2478 2478 MS2 17/18 Linfeng_20120130_CHD1_10.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 232 3.39 0.00 0 11 17 2 665.32129 1329.63530 -3.08 28.87 3319 3319 MS2 19/22 Linfeng_091311_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 428 3.39 0.00 0 11 25 2 730.90167 1460.79607 -2.41 43.60 5141 5141 MS2 19/22 Linfeng_091311_rIgG_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 3.38 0.00 0 40 100 2 665.32635 1329.64543 4.54 28.86 2630 2630 MS2 19/22 Linfeng_20120130_CHD1_10.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.37 0.00 0 3 25 2 870.85602 1740.70476 -0.50 17.65 1678 1678 MS2 27/38 Linfeng_091311_rIgG_5.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 138 3.37 0.00 0 6 25 2 599.27747 1197.54766 -1.56 16.83 1600 1600 MS2 23/28 Linfeng_091311_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 78 3.37 0.00 0 9 25 2 660.79370 1320.58013 -2.11 21.89 2318 2318 MS2 23/30 Linfeng_091311_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 3.37 0.00 0 57 100 2 665.32483 1329.64238 2.24 30.38 2701 2701 MS2 18/22 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 3.37 0.00 0 14 100 2 597.31427 1193.62126 4.31 30.03 2154 2154 MS2 16/18 Linfeng_20120130_CHD1_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 80 3.37 0.00 0 23 25 2 660.79376 1320.58025 -2.02 21.58 2305 2305 MS2 22/30 Linfeng_091311_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.36 0.00 0 7 25 2 665.32147 1329.63567 -2.81 28.96 3390 3390 MS2 19/22 Linfeng_091311_rIgG_10.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 3.36 0.00 1 10 25 3 652.67419 1956.00803 2.39 41.63 4393 4393 MS2 27/64 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 546 3.36 0.00 0 14 100 2 597.31329 1193.61931 2.67 30.76 2359 2359 MS2 16/18 Linfeng_20120130_CHD1_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 263 3.35 0.00 0 9 25 3 443.88336 1329.63553 -2.91 28.89 3322 3322 MS2 27/44 Linfeng_091311_rIgG_2.raw High NKLNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 3.35 0.00 2 11 25 3 733.38647 2198.14487 1.64 41.59 3868 3868 MS2 31/72 Linfeng_122411_rIgG_7.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.35 0.00 0 4 25 2 730.90515 1460.80303 2.35 42.38 4243 4243 MS2 20/22 Linfeng_122411_rIgG_10.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 322 3.34 0.00 0 3 25 2 730.90594 1460.80461 3.44 42.20 4464 4464 MS2 19/22 Linfeng_122411_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 346 3.34 0.00 0 68 100 2 665.32520 1329.64311 2.79 27.87 2002 2002 MS2 18/22 Linfeng_20120130_CHD1_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 234 3.34 0.00 0 20 25 2 665.32111 1329.63494 -3.36 29.15 3347 3347 MS2 19/22 Linfeng_091311_rIgG_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 88 3.34 0.00 0 31 25 3 440.86475 1320.57969 -2.44 21.67 2368 2368 MS2 32/60 Linfeng_091311_rIgG_10.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 537 3.34 0.00 1 37 100 3 464.56635 1391.68448 3.09 18.25 1140 1140 MS2 20/44 Linfeng_20120130_CHD1_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 579 3.33 0.00 0 3 24 2 604.81360 1208.61992 3.41 30.01 2627 2627 MS2 17/20 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.33 0.00 0 38 25 2 627.80914 1254.61101 2.90 21.31 1615 1615 MS2 17/26 Linfeng_122411_rIgG_10.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 3.32 0.00 0 3 4 2 730.90479 1460.80229 1.85 42.38 4364 4364 MS2 19/22 Linfeng_122411_rIgG_3.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 312 3.32 0.00 1 13 25 2 696.34155 1391.67583 -3.13 17.84 1778 1778 MS2 19/22 Linfeng_091311_rIgG_2.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 519 3.32 0.00 0 13 100 3 825.40509 2474.20072 3.22 36.24 4073 4073 MS2 21/96 Linfeng_20120130_CHD1_8.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 3.32 0.00 0 19 25 2 627.80530 1254.60332 -3.23 21.66 2030 2030 MS2 21/26 Linfeng_091311_rIgG_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 406 3.31 0.00 0 9 25 3 457.90729 1371.70731 -3.06 34.62 4038 4038 MS2 28/44 Linfeng_091311_rIgG_3.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 431 3.31 0.00 0 31 25 2 730.90204 1460.79680 -1.91 43.68 5248 5248 MS2 18/22 Linfeng_091311_rIgG_8.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.31 0.00 0 26 25 2 665.32172 1329.63616 -2.44 29.09 3293 3293 MS2 19/22 Linfeng_091311_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 12 3.31 0.00 0 0 25 2 870.85620 1740.70513 -0.29 17.75 1694 1694 MS2 26/38 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 48 3.31 0.00 0 0 25 2 871.37671 1741.74614 -1.38 18.54 1805 1805 MS2 20/44 Linfeng_091311_rIgG_9.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 527 3.30 0.00 0 24 100 3 613.64594 1838.92325 4.75 45.04 5740 5740 MS2 29/84 Linfeng_20120130_CHD1_4.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.30 0.00 1 9 25 3 652.67114 1955.99887 -2.29 42.53 5108 5108 MS2 30/64 Linfeng_091311_rIgG_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 3.30 0.00 0 8 2 2 627.80743 1254.60759 0.18 3.41 354 354 MS2 22/26 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 14 25 2 870.85547 1740.70366 -1.13 17.42 1682 1682 MS2 26/38 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 579 3.29 0.00 0 7 100 2 597.31250 1193.61772 1.34 27.70 2303 2303 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 3.29 0.00 0 22 100 2 665.32593 1329.64458 3.89 27.87 2474 2474 MS2 18/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 3.28 0.00 0 15 25 2 627.80536 1254.60344 -3.13 22.52 2355 2355 MS2 22/26 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 3.28 0.00 0 4 25 2 730.90582 1460.80437 3.27 42.36 4530 4530 MS2 19/22 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 584 3.28 0.00 0 10 100 2 597.31360 1193.61992 3.18 30.60 2887 2887 MS2 17/18 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 3.28 0.00 0 41 25 3 613.64130 1838.90934 -2.81 37.22 4138 4138 MS2 32/84 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 3.27 0.00 0 3 17 2 604.81384 1208.62041 3.81 30.33 2693 2693 MS2 16/20 Linfeng_20120130_CHD1_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 59 3.27 0.00 0 0 25 2 871.38171 1741.75615 4.36 17.25 1429 1429 MS2 21/44 Linfeng_122411_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.27 0.00 0 2 24 2 604.81293 1208.61858 2.30 29.74 2569 2569 MS2 16/20 Linfeng_20120130_CHD1_4.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 403 3.26 0.00 1 20 25 3 538.62024 1613.84616 -2.01 35.71 4155 4155 MS2 27/52 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 413 3.26 0.00 0 4 25 2 730.90277 1460.79827 -0.91 43.38 5146 5146 MS2 19/22 Linfeng_091311_rIgG_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 258 3.25 0.00 0 10 25 3 443.88361 1329.63626 -2.36 29.19 3254 3254 MS2 28/44 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.25 0.00 0 3 18 2 730.90240 1460.79753 -1.41 43.61 5148 5148 MS2 19/22 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 587 3.25 0.00 0 5 15 2 604.81354 1208.61980 3.31 30.59 2747 2747 MS2 16/20 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 45 3.25 0.00 0 28 25 3 581.25311 1741.74479 -2.16 18.34 1813 1813 MS2 34/88 Linfeng_091311_rIgG_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 89 3.24 0.00 0 4 5 3 440.86560 1320.58225 -0.50 4.09 437 437 MS2 35/60 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 564 3.24 0.00 0 6 87 2 604.81415 1208.62102 4.32 30.51 2604 2604 MS2 16/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 397 3.24 0.00 1 4 100 3 758.02124 2272.04917 4.09 27.97 2231 2231 MS2 25/72 Linfeng_20120130_CHD1_4.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 3.24 0.00 0 17 25 2 686.35699 1371.70671 -3.49 34.75 3988 3988 MS2 20/22 Linfeng_091311_rIgG_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 3.23 0.00 0 17 25 2 730.90259 1460.79790 -1.16 43.54 5293 5293 MS2 19/22 Linfeng_091311_rIgG_10.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 3.23 0.00 0 5 25 2 686.35712 1371.70696 -3.31 34.82 4031 4031 MS2 20/22 Linfeng_091311_rIgG_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 585 3.23 0.00 0 2 48 2 604.81366 1208.62004 3.51 29.62 2548 2548 MS2 16/20 Linfeng_20120130_CHD1_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.23 0.00 0 2 25 2 627.80591 1254.60454 -2.26 22.66 2396 2396 MS2 23/26 Linfeng_091311_rIgG_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 238 3.23 0.00 0 36 25 2 627.80890 1254.61052 2.51 21.42 1727 1727 MS2 19/26 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 3.23 0.00 0 26 25 2 730.90497 1460.80266 2.10 42.61 4318 4318 MS2 17/22 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 586 3.23 0.00 0 2 33 2 604.81384 1208.62041 3.81 29.85 2593 2593 MS2 16/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 3.22 0.00 0 3 16 2 604.81360 1208.61992 3.41 30.63 2755 2755 MS2 17/20 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 583 3.22 0.00 0 9 100 2 597.31415 1193.62102 4.10 27.86 1965 1965 MS2 17/18 Linfeng_20120130_CHD1_2.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 3.22 0.00 1 13 25 2 807.42932 1613.85137 1.22 34.72 3408 3408 MS2 22/26 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 581 3.22 0.00 0 4 31 2 604.81360 1208.61992 3.41 29.90 2604 2604 MS2 17/20 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 3.22 0.00 0 4 22 2 604.81354 1208.61980 3.31 30.80 2788 2788 MS2 16/20 Linfeng_20120130_CHD1_4.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 70 3.22 0.00 0 23 25 3 440.86411 1320.57776 -3.90 21.82 2273 2273 MS2 30/60 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 149 3.21 0.00 0 4 25 2 599.27704 1197.54680 -2.27 17.12 1627 1627 MS2 21/28 Linfeng_091311_rIgG_7.raw High MSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 537 3.21 0.00 0 23 100 3 820.07330 2458.20536 3.06 38.60 4787 4787 MS2 23/96 Linfeng_20120130_CHD1_5.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.20 0.00 0 3 24 2 730.90234 1460.79741 -1.49 43.34 5144 5144 MS2 19/22 Linfeng_091311_rIgG_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 578 3.20 0.00 0 4 18 2 604.81366 1208.62004 3.51 30.19 2662 2662 MS2 17/20 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 526 3.20 0.00 0 3 38 2 604.81305 1208.61882 2.50 29.51 2529 2529 MS2 16/20 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 3.20 0.00 0 9 100 2 738.39703 1475.78679 1.00 25.84 2038 2038 MS2 17/22 Linfeng_20120130_CHD1_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 3.20 0.00 0 14 100 2 597.31415 1193.62102 4.10 30.96 2283 2283 MS2 17/18 Linfeng_20120130_CHD1_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 486 3.20 0.00 0 3 80 2 604.81433 1208.62139 4.62 30.29 2563 2563 MS2 16/20 Linfeng_20120130_CHD1_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.19 0.00 0 3 19 2 570.27551 1139.54375 3.13 33.00 3259 3259 MS2 13/16 Linfeng_20120130_CHD1_4.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.19 0.00 0 7 25 2 627.80548 1254.60369 -2.94 22.34 2373 2373 MS2 22/26 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 582 3.19 0.00 0 8 100 2 597.31354 1193.61980 3.08 28.01 1911 1911 MS2 16/18 Linfeng_20120130_CHD1_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 573 3.19 0.00 0 4 72 2 604.81415 1208.62102 4.32 30.37 2577 2577 MS2 16/20 Linfeng_20120130_CHD1_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.19 0.00 0 14 100 2 597.31482 1193.62236 5.23 31.19 2316 2316 MS2 17/18 Linfeng_20120130_CHD1_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 528 3.19 0.00 0 20 100 2 597.31464 1193.62200 4.92 30.31 2565 2565 MS2 16/18 Linfeng_20120130_CHD1_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 3.19 0.00 0 3 31 2 604.81360 1208.61992 3.41 29.81 2586 2586 MS2 17/20 Linfeng_20120130_CHD1_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 140 3.18 0.00 0 8 25 2 599.27728 1197.54729 -1.86 16.74 1598 1598 MS2 20/28 Linfeng_091311_rIgG_3.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 3.18 0.00 0 60 100 2 665.32556 1329.64385 3.34 27.18 2084 2084 MS2 19/22 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 586 3.18 0.00 0 15 100 2 597.31390 1193.62053 3.69 27.94 1902 1902 MS2 17/18 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 143 3.18 0.00 0 16 25 2 599.27740 1197.54753 -1.66 16.97 1657 1657 MS2 22/28 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 576 3.18 0.00 0 23 100 2 597.31421 1193.62114 4.21 30.01 2253 2253 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FGGFGGPGGVGGLGGPGGFGPGGYPGGIHEVSVNQSLLQPLNVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 151 3.17 0.00 0 2 25 3 1364.69287 4092.06406 -2.15 44.41 5273 5273 MS2 38/172 Linfeng_091311_rIgG_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 534 3.16 0.00 0 29 100 3 613.64526 1838.92124 3.66 45.16 5766 5766 MS2 28/84 Linfeng_20120130_CHD1_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 567 3.16 0.00 0 16 100 2 597.31354 1193.61980 3.08 30.13 2273 2273 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 364 3.16 0.00 0 63 100 2 665.32556 1329.64385 3.34 27.86 1938 1938 MS2 19/22 Linfeng_20120130_CHD1_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 546 3.16 0.00 0 21 100 2 597.31305 1193.61882 2.26 30.28 2293 2293 MS2 17/18 Linfeng_20120130_CHD1_9.raw High YGSGGGSKGGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 124 3.16 0.00 1 5 25 3 630.95630 1890.85434 -1.80 17.45 1698 1698 MS2 33/88 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 3.15 0.00 0 3 89 2 604.81390 1208.62053 3.91 30.09 2529 2529 MS2 16/20 Linfeng_20120130_CHD1_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 3.15 0.00 0 3 100 2 604.81390 1208.62053 3.91 29.79 2479 2479 MS2 16/20 Linfeng_20120130_CHD1_1.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 353 3.15 0.00 1 17 100 3 758.01898 2272.04239 1.11 26.96 2038 2038 MS2 22/72 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 563 3.14 0.00 0 33 100 2 597.31323 1193.61919 2.57 29.81 2785 2785 MS2 17/18 Linfeng_20120130_CHD1_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 574 3.14 0.00 0 2 95 2 604.81390 1208.62053 3.91 30.00 2513 2513 MS2 16/20 Linfeng_20120130_CHD1_1.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.13 0.00 0 16 25 2 730.90247 1460.79766 -1.33 43.69 5151 5151 MS2 18/22 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 579 3.13 0.00 0 2 43 2 604.81360 1208.61992 3.41 29.66 2555 2555 MS2 17/20 Linfeng_20120130_CHD1_4.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 264 3.13 0.00 0 15 25 3 443.88336 1329.63553 -2.91 29.24 3295 3295 MS2 22/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 239 3.11 0.00 0 15 25 2 627.80554 1254.60381 -2.84 22.28 2370 2370 MS2 21/26 Linfeng_091311_rIgG_3.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 546 3.11 0.00 0 14 100 2 686.36194 1371.71660 3.72 41.99 4310 4310 MS2 15/22 Linfeng_20120130_CHD1_3.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 233 3.11 0.00 0 42 25 2 627.80945 1254.61162 3.39 21.45 1836 1836 MS2 19/26 Linfeng_122411_rIgG_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 3.11 0.00 0 12 25 2 627.80573 1254.60417 -2.55 22.58 2411 2411 MS2 22/26 Linfeng_091311_rIgG_6.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 228 3.11 0.00 0 2 21 2 627.80505 1254.60283 -3.62 22.44 2475 2475 MS2 21/26 Linfeng_091311_rIgG_10.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 150 3.11 0.00 0 6 25 2 599.27734 1197.54741 -1.76 17.16 1667 1667 MS2 20/28 Linfeng_091311_rIgG_6.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 178 3.10 0.00 1 33 25 3 429.87396 1287.60733 -2.89 21.17 2218 2218 MS2 24/40 Linfeng_091311_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High GSSSGGGYSSGSSSYGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 14 3.10 0.00 0 28 25 3 580.90515 1740.70090 -2.72 17.51 1707 1707 MS2 25/76 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 578 3.08 0.00 0 5 51 2 604.81360 1208.61992 3.41 31.00 2830 2830 MS2 16/20 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 574 3.08 0.00 0 3 100 2 604.81354 1208.61980 3.31 29.33 2496 2496 MS2 16/20 Linfeng_20120130_CHD1_4.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 64 3.08 0.00 0 44 25 2 794.84583 1588.68437 0.57 14.11 1226 1226 MS2 24/38 Linfeng_091311_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 71 3.07 0.00 0 16 25 2 660.79340 1320.57952 -2.57 21.95 2298 2298 MS2 23/30 Linfeng_091311_rIgG_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 574 3.07 0.00 0 3 76 2 604.81427 1208.62126 4.52 30.34 2572 2572 MS2 16/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 581 3.07 0.00 0 5 100 2 738.39868 1475.79009 3.23 25.86 1790 1790 MS2 15/22 Linfeng_20120130_CHD1_6.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 3.07 0.00 1 11 25 3 652.67352 1956.00602 1.36 41.89 3905 3905 MS2 24/64 Linfeng_122411_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 587 3.06 0.00 0 10 100 2 597.31396 1193.62065 3.80 28.27 1975 1975 MS2 16/18 Linfeng_20120130_CHD1_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 372 3.06 0.00 1 87 100 3 758.01959 2272.04422 1.92 26.71 1973 1973 MS2 22/72 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 3.05 0.00 0 18 100 2 597.31348 1193.61968 2.98 30.96 2194 2194 MS2 16/18 Linfeng_20120130_CHD1_7.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 450 3.05 0.00 0 24 25 2 730.90173 1460.79619 -2.33 43.49 5118 5118 MS2 19/22 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 52 3.04 0.00 0 4 25 2 871.38086 1741.75444 3.38 17.44 1285 1285 MS2 21/44 Linfeng_122411_rIgG_7.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 3.04 0.00 1 3 25 2 668.85999 1336.71269 1.44 22.80 2017 2017 MS2 18/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 482 3.03 0.00 0 6 35 2 730.90576 1460.80425 3.19 46.93 6330 6330 MS2 18/22 Linfeng_20120130_CHD1_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.03 0.00 0 8 100 2 604.81335 1208.61943 3.00 29.99 2813 2813 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High LLRDYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M9(Oxidation) CID 1.0000 0.0000 1 1 551 3.03 0.00 1 28 100 2 769.40784 1537.80840 2.63 34.67 3638 3638 MS2 13/22 Linfeng_20120130_CHD1_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 440 3.02 0.00 0 53 100 2 730.90649 1460.80571 4.19 1.71 307 307 MS2 16/22 Linfeng_20120130_CHD1_6.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 424 3.02 0.00 0 18 25 2 686.36053 1371.71379 1.67 33.66 3245 3245 MS2 20/22 Linfeng_122411_rIgG_3.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 578 3.01 0.00 0 4 26 2 604.81366 1208.62004 3.51 30.85 2800 2800 MS2 16/20 Linfeng_20120130_CHD1_4.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 66 3.01 0.00 0 4 25 2 871.38245 1741.75762 5.20 17.40 1311 1311 MS2 18/44 Linfeng_122411_rIgG_8.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 3.01 0.00 1 18 100 3 752.68732 2256.04740 1.08 42.72 3979 3979 MS2 20/72 Linfeng_20120130_CHD1_7.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 265 3.00 0.00 0 24 25 3 443.88318 1329.63498 -3.32 29.21 3355 3355 MS2 24/44 Linfeng_091311_rIgG_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 166 3.00 0.00 0 18 100 2 660.79724 1320.58721 3.25 23.93 1596 1596 MS2 22/30 Linfeng_20120130_CHD1_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 3.00 0.00 0 48 25 2 730.90479 1460.80229 1.85 43.54 4522 4522 MS2 18/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 3.00 0.00 1 43 25 3 429.87381 1287.60688 -3.25 21.15 2244 2244 MS2 20/40 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 224 2.99 0.00 0 1 25 2 627.80536 1254.60344 -3.13 22.54 2374 2374 MS2 21/26 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw Medium TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 167 2.99 0.00 1 21 25 4 564.76660 2256.04458 -0.17 33.96 3311 3311 MS2 32/108 Linfeng_122411_rIgG_2.raw High WELLQQmNVGTR Unambiguous 1 1 IPI00021304.1 M7(Oxidation) CID 1.0000 0.0000 1 1 566 2.99 0.00 0 48 100 2 745.87738 1490.74748 3.61 39.56 4604 4604 MS2 17/22 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.98 0.00 0 64 100 2 665.32581 1329.64433 3.71 28.76 2022 2022 MS2 17/22 Linfeng_20120130_CHD1_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 583 2.97 0.00 0 2 100 2 604.81360 1208.61992 3.41 29.43 2415 2415 MS2 16/20 Linfeng_20120130_CHD1_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 252 2.97 0.00 0 40 25 2 665.32501 1329.64275 2.52 25.13 2081 2081 MS2 18/22 Linfeng_122411_rIgG_8.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 571 2.97 0.00 0 2 100 2 604.81372 1208.62016 3.61 29.96 2507 2507 MS2 16/20 Linfeng_20120130_CHD1_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 390 2.97 0.00 1 31 100 3 752.68976 2256.05472 4.33 41.84 4942 4942 MS2 21/72 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 136 2.97 0.00 0 29 25 2 599.27777 1197.54827 -1.05 17.04 1707 1707 MS2 18/28 Linfeng_091311_rIgG_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 570 2.97 0.00 0 6 100 2 604.81396 1208.62065 4.01 30.21 2287 2287 MS2 16/20 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 432 2.96 0.00 0 5 25 2 597.31165 1193.61601 -0.09 27.61 2655 2655 MS2 17/18 Linfeng_122411_rIgG_6.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.96 0.00 0 71 100 2 665.32544 1329.64360 3.16 27.94 2011 2011 MS2 19/22 Linfeng_20120130_CHD1_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 555 2.96 0.00 0 22 100 2 597.31445 1193.62163 4.61 30.32 2305 2305 MS2 15/18 Linfeng_20120130_CHD1_2.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 2.96 0.00 0 42 25 2 627.80902 1254.61077 2.71 21.44 1575 1575 MS2 19/26 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 543 2.95 0.00 0 32 100 2 597.31293 1193.61858 2.06 29.94 2805 2805 MS2 16/18 Linfeng_20120130_CHD1_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 580 2.95 0.00 0 4 46 2 604.81366 1208.62004 3.51 30.20 2546 2546 MS2 16/20 Linfeng_20120130_CHD1_1.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 613 2.95 0.00 0 5 100 2 604.81415 1208.62102 4.32 29.63 2198 2198 MS2 15/20 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 351 2.95 0.00 0 4 6 2 597.31128 1193.61528 -0.70 4.33 475 475 MS2 17/18 Linfeng_122411_rIgG_10.raw Medium SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.95 0.00 2 21 25 5 514.06244 2566.28309 1.80 29.48 2904 2904 MS2 35/168 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 63 2.94 0.00 0 36 25 3 581.25635 1741.75449 3.41 17.51 1413 1413 MS2 33/88 Linfeng_122411_rIgG_6.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 281 2.94 0.00 0 54 25 2 919.95911 1838.91094 -1.94 38.50 4528 4528 MS2 19/42 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 575 2.93 0.00 0 23 100 2 597.31421 1193.62114 4.21 30.39 2582 2582 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 398 2.92 0.00 0 39 100 2 665.32574 1329.64421 3.62 28.22 2444 2444 MS2 18/22 Linfeng_20120130_CHD1_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 607 2.91 0.00 0 5 100 2 604.81372 1208.62016 3.61 29.78 2122 2122 MS2 15/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 494 2.91 0.00 0 80 100 2 919.96362 1838.91997 2.97 43.31 5337 5337 MS2 13/42 Linfeng_20120130_CHD1_4.raw Medium SKEEAEALYHSKYEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.90 0.00 2 12 25 5 514.06232 2566.28248 1.57 29.39 2691 2691 MS2 41/168 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 148 2.89 0.00 1 10 25 3 752.68445 2256.03879 -2.73 34.96 4048 4048 MS2 24/72 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 306 2.88 0.00 1 74 25 3 464.56271 1391.67359 -4.74 17.98 1807 1807 MS2 24/44 Linfeng_091311_rIgG_8.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 227 2.88 0.00 0 12 25 2 627.80530 1254.60332 -3.23 22.59 2452 2452 MS2 21/26 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 367 2.88 0.00 0 6 8 2 597.31000 1193.61272 -2.85 29.07 3035 3035 MS2 17/18 Linfeng_091311_rIgG_1.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 305 2.87 0.00 0 7 2 2 519.26630 1037.52532 -0.89 4.33 474 474 MS2 16/16 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 581 2.86 0.00 0 7 100 2 604.81323 1208.61919 2.80 29.00 2435 2435 MS2 15/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 373 2.86 0.00 0 27 25 2 597.31323 1193.61919 2.57 27.75 1983 1983 MS2 16/18 Linfeng_122411_rIgG_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.86 0.00 0 10 100 2 627.80908 1254.61089 2.80 20.66 1340 1340 MS2 15/26 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 117 2.85 0.00 0 48 25 3 440.86716 1320.58692 3.03 20.77 1752 1752 MS2 28/60 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw Medium NVQDAIADAEQRGEHALK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 385 2.85 0.00 1 3 25 4 492.00146 1964.98403 2.79 32.91 3179 3179 MS2 38/102 Linfeng_122411_rIgG_2.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 374 2.84 0.00 0 16 25 2 686.35699 1371.70671 -3.49 34.77 4168 4168 MS2 19/22 Linfeng_091311_rIgG_10.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.84 0.00 0 15 25 2 519.26770 1037.52812 1.81 26.04 2391 2391 MS2 15/16 Linfeng_122411_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 389 2.84 0.00 1 14 100 3 752.68994 2256.05527 4.57 42.22 5243 5243 MS2 23/72 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 587 2.84 0.00 0 34 100 2 597.31366 1193.62004 3.29 30.56 2339 2339 MS2 17/18 Linfeng_20120130_CHD1_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 578 2.84 0.00 0 8 92 2 604.81360 1208.61992 3.41 30.66 2627 2627 MS2 15/20 Linfeng_20120130_CHD1_1.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 462 2.84 0.00 0 12 100 2 519.26868 1037.53008 3.70 26.36 1936 1936 MS2 14/16 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.83 0.00 1 0 25 2 696.34241 1391.67754 -1.90 17.80 1737 1737 MS2 18/22 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 2.83 0.00 0 33 25 2 604.81256 1208.61785 1.69 27.44 2461 2461 MS2 16/20 Linfeng_122411_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 386 2.82 0.00 0 9 25 2 597.31311 1193.61894 2.36 26.87 2501 2501 MS2 17/18 Linfeng_122411_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 275 2.82 0.00 0 11 5 2 519.26556 1037.52385 -2.30 28.38 3208 3208 MS2 15/16 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 279 2.82 0.00 0 26 25 2 519.26526 1037.52324 -2.89 28.60 3209 3209 MS2 15/16 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 369 2.82 0.00 0 9 23 2 597.31042 1193.61357 -2.13 28.83 3277 3277 MS2 17/18 Linfeng_091311_rIgG_3.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 2.82 0.00 1 10 100 3 752.68866 2256.05143 2.87 42.32 4731 4731 MS2 25/72 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 558 2.82 0.00 0 54 100 2 597.31384 1193.62041 3.59 31.99 3034 3034 MS2 15/18 Linfeng_20120130_CHD1_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.81 0.00 0 14 25 2 597.31030 1193.61333 -2.34 29.19 3306 3306 MS2 17/18 Linfeng_091311_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 347 2.81 0.00 0 9 25 2 597.31042 1193.61357 -2.13 28.87 3275 3275 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 454 2.81 0.00 0 15 25 2 730.90594 1460.80461 3.44 46.88 6388 6388 MS2 15/22 Linfeng_20120130_CHD1_8.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 549 2.80 0.00 0 3 100 2 604.81335 1208.61943 3.00 30.11 2836 2836 MS2 16/20 Linfeng_20120130_CHD1_10.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 243 2.80 0.00 0 7 8 2 519.26715 1037.52703 0.76 27.11 2590 2590 MS2 15/16 Linfeng_122411_rIgG_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.80 0.00 0 31 25 2 519.26727 1037.52727 0.99 24.64 2303 2303 MS2 15/16 Linfeng_122411_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 578 2.80 0.00 0 32 100 2 597.31415 1193.62102 4.10 30.24 2857 2857 MS2 15/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 588 2.80 0.00 0 2 100 2 604.81390 1208.62053 3.91 29.40 2410 2410 MS2 15/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 559 2.79 0.00 0 8 100 2 597.31329 1193.61931 2.67 30.91 2216 2216 MS2 16/18 Linfeng_20120130_CHD1_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.79 0.00 0 24 25 2 519.26501 1037.52275 -3.36 28.58 3204 3204 MS2 15/16 Linfeng_091311_rIgG_7.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 509 2.79 0.00 0 18 100 2 730.90393 1460.80058 0.68 48.70 6613 6613 MS2 14/22 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 572 2.79 0.00 0 1 100 2 604.81311 1208.61894 2.60 29.26 2483 2483 MS2 16/20 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 526 2.79 0.00 0 3 9 2 604.81305 1208.61882 2.50 30.36 2697 2697 MS2 17/20 Linfeng_20120130_CHD1_4.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 376 2.78 0.00 1 85 100 3 758.02002 2272.04551 2.48 26.69 1989 1989 MS2 20/72 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.78 0.00 0 3 25 2 604.81311 1208.61894 2.60 23.41 1804 1804 MS2 16/20 Linfeng_122411_rIgG_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 604 2.78 0.00 0 7 100 2 604.81384 1208.62041 3.81 30.30 2868 2868 MS2 16/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 602 2.78 0.00 0 18 100 2 604.81409 1208.62090 4.22 31.01 2411 2411 MS2 15/20 Linfeng_20120130_CHD1_2.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 371 2.78 0.00 1 33 100 3 758.02032 2272.04642 2.88 27.10 1798 1798 MS2 25/72 Linfeng_20120130_CHD1_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 567 2.77 0.00 0 9 100 2 604.81384 1208.62041 3.81 30.27 2863 2863 MS2 16/20 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.77 0.00 0 11 25 2 597.31018 1193.61308 -2.54 29.22 3293 3293 MS2 17/18 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.77 0.00 0 21 25 2 597.31311 1193.61894 2.36 26.35 2288 2288 MS2 17/18 Linfeng_122411_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.77 0.00 0 13 25 2 519.26801 1037.52873 2.40 25.27 2145 2145 MS2 16/16 Linfeng_122411_rIgG_3.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.77 0.00 1 12 25 2 668.85773 1336.70818 -1.94 25.09 2758 2758 MS2 17/22 Linfeng_091311_rIgG_4.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 378 2.76 0.00 1 18 100 3 752.68896 2256.05234 3.28 41.60 5479 5479 MS2 22/72 Linfeng_20120130_CHD1_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High GGSSSGGGYGSGGGGSSSVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 68 2.76 0.00 0 4 25 2 794.84546 1588.68364 0.11 14.53 1270 1270 MS2 19/38 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 577 2.76 0.00 0 42 100 2 597.31415 1193.62102 4.10 31.93 3019 3019 MS2 16/18 Linfeng_20120130_CHD1_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 277 2.76 0.00 0 6 5 2 519.26550 1037.52373 -2.42 28.36 3211 3211 MS2 15/16 Linfeng_091311_rIgG_3.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 275 2.76 0.00 0 10 2 2 519.26501 1037.52275 -3.36 28.48 2956 2956 MS2 16/16 Linfeng_091311_rIgG_1.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 532 2.75 0.00 0 24 100 2 519.26855 1037.52983 3.46 26.60 2077 2077 MS2 14/16 Linfeng_20120130_CHD1_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 499 2.75 0.00 0 11 100 2 604.81439 1208.62151 4.72 30.79 2258 2258 MS2 15/20 Linfeng_20120130_CHD1_3.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.75 0.00 1 6 25 2 668.85730 1336.70732 -2.58 24.99 2786 2786 MS2 19/22 Linfeng_091311_rIgG_2.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 151 2.75 0.00 0 23 25 2 599.27679 1197.54631 -2.68 17.15 1688 1688 MS2 19/28 Linfeng_091311_rIgG_8.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 375 2.75 0.00 0 8 25 2 730.90540 1460.80351 2.69 43.65 4692 4692 MS2 16/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 502 2.74 0.00 0 11 100 2 554.27618 1107.54509 1.93 19.62 1273 1273 MS2 14/16 Linfeng_20120130_CHD1_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 280 2.74 0.00 0 24 7 2 519.26501 1037.52275 -3.36 28.31 3242 3242 MS2 15/16 Linfeng_091311_rIgG_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 315 2.73 0.00 0 9 100 2 570.27649 1139.54570 4.84 32.48 2988 2988 MS2 13/16 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 594 2.73 0.00 0 100 2 738.40015 1475.79302 5.21 34.99 3789 3789 MS2 17/22 Linfeng_20120130_CHD1_8.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 532 2.73 0.00 0 33 100 3 613.64514 1838.92087 3.46 43.08 5837 5837 MS2 24/84 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 217 2.73 0.00 0 11 25 2 627.80493 1254.60259 -3.81 22.70 2169 2169 MS2 20/26 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.72 0.00 1 6 2 2 668.85938 1336.71147 0.53 3.67 375 375 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 584 2.71 0.00 0 20 100 2 597.31238 1193.61748 1.14 27.85 1999 1999 MS2 16/18 Linfeng_20120130_CHD1_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.70 0.00 0 13 100 2 554.27686 1107.54643 3.14 17.96 1214 1214 MS2 14/16 Linfeng_20120130_CHD1_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.70 0.00 0 19 25 2 597.31281 1193.61833 1.85 26.19 2294 2294 MS2 16/18 Linfeng_122411_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 277 2.69 0.00 0 28 25 2 519.26520 1037.52312 -3.01 28.52 3216 3216 MS2 15/16 Linfeng_091311_rIgG_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 285 2.69 0.00 0 63 25 2 519.26544 1037.52361 -2.54 28.51 3163 3163 MS2 15/16 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 606 2.69 0.00 0 24 100 2 604.81403 1208.62078 4.12 30.87 2666 2666 MS2 15/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 297 2.68 0.00 0 11 17 2 519.26489 1037.52251 -3.60 28.56 3267 3267 MS2 15/16 Linfeng_091311_rIgG_8.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 320 2.68 0.00 0 45 25 2 597.31049 1193.61370 -2.03 58.44 6791 6791 MS2 15/18 Linfeng_091311_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 278 2.68 0.00 0 20 25 2 519.26672 1037.52617 -0.07 4.32 449 449 MS2 15/16 Linfeng_122411_rIgG_9.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 379 2.67 0.00 0 35 25 2 597.30988 1193.61247 -3.06 28.83 3314 3314 MS2 17/18 Linfeng_091311_rIgG_2.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 215 2.67 0.00 0 14 25 2 390.19312 779.37895 -0.74 14.33 1246 1246 MS2 15/16 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 775 2.67 0.00 0 20 100 2 487.27081 973.53435 3.10 26.24 1750 1750 MS2 12/14 Linfeng_20120130_CHD1_2.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 309 2.67 0.00 0 24 25 2 519.26379 1037.52031 -5.72 26.05 2889 2889 MS2 14/16 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 539 2.67 0.00 0 11 100 2 604.81305 1208.61882 2.50 30.45 2893 2893 MS2 15/20 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.66 0.00 0 6 100 2 554.27667 1107.54607 2.81 17.71 1135 1135 MS2 14/16 Linfeng_20120130_CHD1_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 160 2.66 0.00 0 11 25 2 599.27826 1197.54924 -0.23 17.04 1592 1592 MS2 19/28 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.66 0.00 0 11 25 2 597.31006 1193.61284 -2.75 29.22 3292 3292 MS2 17/18 Linfeng_091311_rIgG_9.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.66 0.00 0 6 5 2 566.25781 1131.50835 -1.40 3.88 408 408 MS2 16/18 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.65 0.00 0 28 25 2 597.31250 1193.61772 1.34 27.77 2340 2340 MS2 16/18 Linfeng_122411_rIgG_10.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 380 2.65 0.00 1 6 100 3 752.68896 2256.05234 3.28 42.30 5299 5299 MS2 23/72 Linfeng_20120130_CHD1_8.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.65 0.00 0 10 25 2 604.81317 1208.61907 2.70 27.66 2605 2605 MS2 15/20 Linfeng_122411_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.65 0.00 0 13 100 2 570.27454 1139.54180 1.42 32.83 2406 2406 MS2 13/16 Linfeng_20120130_CHD1_7.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.64 0.00 0 9 100 2 570.27655 1139.54582 4.95 32.41 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_1.raw High TSQNSELNNMQDLVEDYKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 142 2.64 0.00 1 21 25 3 752.68408 2256.03769 -3.22 34.79 3993 3993 MS2 26/72 Linfeng_091311_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 591 2.64 0.00 0 30 100 2 604.81415 1208.62102 4.32 29.26 2696 2696 MS2 15/20 Linfeng_20120130_CHD1_10.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 161 2.64 0.00 0 18 25 2 599.27838 1197.54949 -0.03 17.18 1614 1614 MS2 21/28 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 358 2.64 0.00 0 4 11 2 604.80951 1208.61174 -3.36 29.64 3112 3112 MS2 15/20 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 559 2.63 0.00 0 7 100 2 604.81342 1208.61955 3.11 30.16 2843 2843 MS2 15/20 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High LNDLEEALQQAKEDLAR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.63 0.00 1 28 23 3 652.67242 1956.00272 -0.33 41.61 4629 4629 MS2 22/64 Linfeng_122411_rIgG_5.raw High mSGDLSSNVTVSVTSSTISSNVASK Unambiguous 1 1 IPI00021304.1 M1(Oxidation) CID 1.0000 0.0000 1 1 511 2.63 0.00 0 41 100 3 825.40387 2474.19706 1.74 37.09 4442 4442 MS2 22/96 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 360 2.62 0.00 0 18 22 2 604.80927 1208.61125 -3.76 29.50 3404 3404 MS2 15/20 Linfeng_091311_rIgG_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.61 0.00 0 0 100 2 570.27588 1139.54448 3.77 32.93 3428 3428 MS2 13/16 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 384 2.61 0.00 0 32 25 2 597.31024 1193.61321 -2.44 29.86 3453 3453 MS2 17/18 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.61 0.00 0 8 5 2 566.25836 1131.50945 -0.43 3.73 385 385 MS2 15/18 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 690 2.61 0.00 0 33 25 2 487.26700 973.52672 -4.74 27.81 3174 3174 MS2 12/14 Linfeng_091311_rIgG_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.60 0.00 0 9 64 2 570.27197 1139.53667 -3.08 32.82 3422 3422 MS2 13/16 Linfeng_20120130_CHD1_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 589 2.59 0.00 0 31 100 2 604.81390 1208.62053 3.91 29.52 2739 2739 MS2 14/20 Linfeng_20120130_CHD1_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.59 0.00 0 9 25 2 604.81335 1208.61943 3.00 22.40 1704 1704 MS2 15/20 Linfeng_122411_rIgG_10.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.59 0.00 0 4 2 2 566.25775 1131.50823 -1.51 4.07 457 457 MS2 16/18 Linfeng_122411_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 2.58 0.00 0 11 100 2 554.27679 1107.54631 3.03 19.74 1344 1344 MS2 14/16 Linfeng_20120130_CHD1_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.58 0.00 0 31 25 2 597.31311 1193.61894 2.36 27.29 2441 2441 MS2 17/18 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 401 2.58 0.00 0 18 25 2 604.81372 1208.62016 3.61 22.68 1689 1689 MS2 14/20 Linfeng_122411_rIgG_9.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 458 2.58 0.00 0 16 100 2 519.26886 1037.53044 4.05 26.32 1924 1924 MS2 14/16 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 2.57 0.00 0 13 25 2 604.81000 1208.61272 -2.55 29.80 3370 3370 MS2 15/20 Linfeng_091311_rIgG_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 2.57 0.00 0 16 100 2 604.81317 1208.61907 2.70 29.88 2239 2239 MS2 14/20 Linfeng_20120130_CHD1_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.57 0.00 0 8 25 2 604.80975 1208.61223 -2.95 29.78 3384 3384 MS2 15/20 Linfeng_091311_rIgG_6.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.56 0.00 0 0 93 2 570.27167 1139.53606 -3.62 32.73 3395 3395 MS2 14/16 Linfeng_20120130_CHD1_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 580 2.56 0.00 0 13 100 2 604.81378 1208.62029 3.71 30.60 2924 2924 MS2 15/20 Linfeng_20120130_CHD1_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 328 2.56 0.00 0 16 100 2 570.27472 1139.54216 1.74 32.90 2444 2444 MS2 13/16 Linfeng_20120130_CHD1_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 574 2.56 0.00 0 11 100 2 604.81403 1208.62078 4.12 30.73 2640 2640 MS2 15/20 Linfeng_20120130_CHD1_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.56 0.00 0 16 100 2 570.27594 1139.54460 3.88 32.55 2676 2676 MS2 14/16 Linfeng_20120130_CHD1_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 280 2.55 0.00 0 18 25 2 519.26550 1037.52373 -2.42 28.47 3322 3322 MS2 15/16 Linfeng_091311_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.55 0.00 0 23 99 2 570.27155 1139.53581 -3.83 32.66 3376 3376 MS2 13/16 Linfeng_20120130_CHD1_5.raw High TSQNSELNNmQDLVEDYKK Unambiguous 1 1 IPI00021304.1 M10(Oxidation) CID 1.0000 0.0000 1 1 368 2.55 0.00 1 40 100 3 758.01947 2272.04386 1.76 26.66 2089 2089 MS2 20/72 Linfeng_20120130_CHD1_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 371 2.54 0.00 0 6 16 2 604.81012 1208.61296 -2.35 29.54 3365 3365 MS2 15/20 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.54 0.00 0 15 25 2 604.81299 1208.61870 2.40 27.51 2443 2443 MS2 15/20 Linfeng_122411_rIgG_3.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 83 2.54 0.00 0 23 25 2 660.79358 1320.57988 -2.29 21.74 2378 2378 MS2 18/30 Linfeng_091311_rIgG_10.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 593 2.54 0.00 0 4 100 2 604.81384 1208.62041 3.81 29.19 2379 2379 MS2 15/20 Linfeng_20120130_CHD1_1.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 768 2.53 0.00 0 18 100 2 487.27054 973.53380 2.54 29.86 2133 2133 MS2 13/14 Linfeng_20120130_CHD1_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 554 2.53 0.00 0 10 100 2 604.81323 1208.61919 2.80 29.75 2706 2706 MS2 14/20 Linfeng_20120130_CHD1_8.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 2.53 0.00 0 9 100 2 604.81415 1208.62102 4.32 29.06 2355 2355 MS2 15/20 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High VELQSKVDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 198 2.52 0.00 1 24 25 3 715.73370 2145.18656 2.94 41.11 4373 4373 MS2 28/68 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 540 2.52 0.00 0 7 100 2 604.81268 1208.61809 1.89 29.84 2723 2723 MS2 14/20 Linfeng_20120130_CHD1_8.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 84 2.52 0.00 0 23 10 2 660.79565 1320.58403 0.85 3.28 332 332 MS2 20/30 Linfeng_122411_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 554 2.52 0.00 0 8 100 2 604.81329 1208.61931 2.90 30.16 2113 2113 MS2 12/20 Linfeng_20120130_CHD1_7.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 529 2.51 0.00 0 29 100 2 519.26807 1037.52886 2.52 29.82 2587 2587 MS2 14/16 Linfeng_20120130_CHD1_4.raw High SKEEAEALYHSK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 337 2.51 0.00 1 27 25 2 696.34296 1391.67864 -1.11 18.06 1759 1759 MS2 16/22 Linfeng_091311_rIgG_7.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 606 2.51 0.00 0 26 100 2 604.81366 1208.62004 3.51 29.59 2752 2752 MS2 14/20 Linfeng_20120130_CHD1_10.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 2.49 0.00 0 5 25 2 566.25616 1131.50505 -4.32 24.80 2691 2691 MS2 16/18 Linfeng_091311_rIgG_7.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.48 0.00 0 35 25 2 597.31360 1193.61992 3.18 27.75 2157 2157 MS2 16/18 Linfeng_122411_rIgG_7.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 12 100 2 570.27448 1139.54167 1.31 33.07 3355 3355 MS2 12/16 Linfeng_20120130_CHD1_8.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 83 2.48 0.00 0 18 25 2 566.25739 1131.50749 -2.16 24.77 2657 2657 MS2 16/18 Linfeng_091311_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 372 2.48 0.00 0 6 24 2 604.81018 1208.61308 -2.25 29.50 3367 3367 MS2 15/20 Linfeng_091311_rIgG_3.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 318 2.48 0.00 0 30 25 2 597.31122 1193.61516 -0.81 57.93 6876 6876 MS2 14/18 Linfeng_091311_rIgG_2.raw Medium YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 387 2.48 0.00 0 22 25 3 398.54449 1193.61893 2.35 26.45 2302 2302 MS2 17/36 Linfeng_122411_rIgG_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 576 2.48 0.00 0 11 100 2 604.81348 1208.61968 3.21 30.54 2913 2913 MS2 15/20 Linfeng_20120130_CHD1_10.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 2.48 0.00 0 26 25 2 566.25653 1131.50578 -3.67 24.50 2682 2682 MS2 16/18 Linfeng_091311_rIgG_3.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.46 0.00 0 38 25 2 597.31018 1193.61308 -2.54 30.58 3505 3505 MS2 17/18 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 2.46 0.00 0 25 25 2 597.31195 1193.61662 0.42 56.91 6794 6794 MS2 15/18 Linfeng_091311_rIgG_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 300 2.45 0.00 0 30 100 2 570.27319 1139.53911 -0.94 33.08 3490 3490 MS2 13/16 Linfeng_20120130_CHD1_5.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 2.45 0.00 0 14 25 2 566.25970 1131.51213 1.94 21.68 1866 1866 MS2 17/18 Linfeng_122411_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High TAAENDFVTLKK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.45 0.00 1 14 25 2 668.85712 1336.70696 -2.85 25.06 2760 2760 MS2 17/22 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 703 2.45 0.00 0 7 100 2 487.27097 973.53465 3.41 26.00 1876 1876 MS2 13/14 Linfeng_20120130_CHD1_4.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 2.45 0.00 0 15 25 2 566.25641 1131.50554 -3.88 24.78 2750 2750 MS2 17/18 Linfeng_091311_rIgG_8.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 2.44 0.00 0 5 13 2 566.25647 1131.50566 -3.78 24.52 2720 2720 MS2 17/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 586 2.44 0.00 0 34 100 2 604.81342 1208.61955 3.11 29.45 2725 2725 MS2 12/20 Linfeng_20120130_CHD1_10.raw High RSTSSFScLSR Unambiguous 1 1 IPI00021304.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.44 0.00 1 24 25 2 644.30841 1287.60954 -1.17 18.79 1638 1638 MS2 13/20 Linfeng_091311_rIgG_1.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 535 2.43 0.00 0 7 7 2 487.26852 973.52977 -1.60 4.01 424 424 MS2 13/14 Linfeng_122411_rIgG_10.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 751 2.43 0.00 0 12 100 2 487.27066 973.53404 2.79 26.27 2017 2017 MS2 13/14 Linfeng_20120130_CHD1_5.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 235 2.43 0.00 0 23 25 2 627.80957 1254.61186 3.58 21.42 1586 1586 MS2 17/26 Linfeng_122411_rIgG_9.raw High NVQDAIADAEQR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 383 2.43 0.00 0 66 100 2 665.32599 1329.64470 3.99 27.81 1933 1933 MS2 16/22 Linfeng_20120130_CHD1_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 494 2.42 0.00 0 8 100 2 554.27698 1107.54668 3.37 19.64 1297 1297 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 514 2.42 0.00 0 19 100 2 686.36163 1371.71599 3.27 43.48 5379 5379 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 376 2.41 0.00 0 46 25 2 597.31274 1193.61821 1.75 27.82 2266 2266 MS2 15/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.41 0.00 0 7 25 2 566.25714 1131.50701 -2.59 24.80 2716 2716 MS2 16/18 Linfeng_091311_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 573 2.41 0.00 0 10 100 2 604.81317 1208.61907 2.70 29.63 2685 2685 MS2 13/20 Linfeng_20120130_CHD1_8.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 62 2.40 0.00 0 3 25 2 871.38123 1741.75517 3.80 17.37 1311 1311 MS2 21/44 Linfeng_122411_rIgG_10.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 760 2.39 0.00 0 23 100 2 487.27008 973.53288 1.60 29.31 2621 2621 MS2 13/14 Linfeng_20120130_CHD1_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 594 2.38 0.00 0 21 100 2 604.81348 1208.61968 3.21 30.74 2952 2952 MS2 14/20 Linfeng_20120130_CHD1_10.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 394 2.38 0.00 0 29 25 2 597.31018 1193.61308 -2.54 29.09 3407 3407 MS2 17/18 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 2.37 0.00 0 35 25 2 566.25592 1131.50456 -4.75 24.59 2778 2778 MS2 14/18 Linfeng_091311_rIgG_10.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 377 2.36 0.00 0 10 25 2 519.26776 1037.52825 1.93 25.20 2161 2161 MS2 15/16 Linfeng_122411_rIgG_2.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 2.35 0.00 0 12 25 2 566.25677 1131.50627 -3.24 24.48 2673 2673 MS2 15/18 Linfeng_091311_rIgG_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 594 2.35 0.00 0 41 100 2 604.81360 1208.61992 3.41 31.38 2909 2909 MS2 15/20 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 574 2.35 0.00 0 20 100 2 604.81335 1208.61943 3.00 29.23 2610 2610 MS2 14/20 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.34 0.00 0 34 100 2 519.26776 1037.52825 1.93 29.97 2615 2615 MS2 14/16 Linfeng_20120130_CHD1_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 23 25 2 519.26373 1037.52019 -5.83 26.10 2940 2940 MS2 12/16 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 748 2.32 0.00 0 37 100 2 487.27011 973.53295 1.66 29.29 2488 2488 MS2 12/14 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 282 2.32 0.00 0 4 100 2 599.28027 1197.55327 3.13 14.33 921 921 MS2 16/28 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 597 2.31 0.00 0 13 100 2 604.81390 1208.62053 3.91 28.94 2335 2335 MS2 15/20 Linfeng_20120130_CHD1_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 567 2.31 0.00 0 25 100 2 604.81299 1208.61870 2.40 30.30 2154 2154 MS2 14/20 Linfeng_20120130_CHD1_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 565 2.30 0.00 0 23 100 2 604.81317 1208.61907 2.70 30.18 2143 2143 MS2 15/20 Linfeng_20120130_CHD1_6.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 536 2.30 0.00 0 33 100 2 519.26831 1037.52934 2.99 30.32 2690 2690 MS2 14/16 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 373 2.30 0.00 0 17 21 2 604.81030 1208.61333 -2.05 29.84 3340 3340 MS2 15/20 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 175 2.29 0.00 0 31 25 2 599.28040 1197.55351 3.33 16.04 1217 1217 MS2 16/28 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 34 100 2 570.27490 1139.54253 2.06 32.60 2546 2546 MS2 12/16 Linfeng_20120130_CHD1_3.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 570 2.29 0.00 0 25 76 2 604.81335 1208.61943 3.00 30.60 2886 2886 MS2 15/20 Linfeng_20120130_CHD1_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 533 2.28 0.00 0 37 100 2 519.26849 1037.52971 3.34 29.90 2606 2606 MS2 14/16 Linfeng_20120130_CHD1_4.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 2.26 0.00 0 8 100 2 604.81384 1208.62041 3.81 29.32 2154 2154 MS2 13/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 539 2.25 0.00 0 34 100 2 519.26849 1037.52971 3.34 30.43 2714 2714 MS2 13/16 Linfeng_20120130_CHD1_4.raw High SISISVAGGGGGFGAAGGFGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 268 2.25 0.00 0 64 25 2 919.95728 1838.90727 -3.94 59.24 6809 6809 MS2 17/42 Linfeng_091311_rIgG_3.raw High NKLNDLEEALQQAK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.25 0.00 1 70 100 2 807.43170 1613.85613 4.17 46.88 5326 5326 MS2 16/26 Linfeng_20120130_CHD1_3.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 159 2.24 0.00 0 27 25 2 599.28076 1197.55425 3.95 16.05 1304 1304 MS2 15/28 Linfeng_122411_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 28 100 2 487.27078 973.53429 3.04 26.18 1743 1743 MS2 12/14 Linfeng_20120130_CHD1_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 15 100 2 570.27161 1139.53594 -3.73 32.49 3330 3330 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 18 25 2 519.26367 1037.52007 -5.95 26.14 2636 2636 MS2 12/16 Linfeng_091311_rIgG_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.22 0.00 0 17 100 2 570.27533 1139.54338 2.81 32.52 3224 3224 MS2 13/16 Linfeng_20120130_CHD1_8.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 666 2.22 0.00 0 10 25 2 487.27020 973.53313 1.85 20.12 1734 1734 MS2 13/14 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 2.22 0.00 0 21 25 2 566.25635 1131.50542 -3.99 24.70 2676 2676 MS2 12/18 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 25 100 2 570.27618 1139.54509 4.31 32.40 3311 3311 MS2 12/16 Linfeng_20120130_CHD1_10.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.21 0.00 0 20 25 2 604.80963 1208.61199 -3.16 29.81 3435 3435 MS2 15/20 Linfeng_091311_rIgG_8.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 289 2.21 0.00 0 56 25 2 519.26514 1037.52300 -3.13 28.73 3300 3300 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High YLDGLTAER Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 539 2.21 0.00 0 32 100 2 519.26776 1037.52825 1.93 30.37 2699 2699 MS2 14/16 Linfeng_20120130_CHD1_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 766 2.21 0.00 0 16 100 2 487.27078 973.53429 3.04 29.65 2109 2109 MS2 12/14 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 499 2.19 0.00 0 44 25 2 487.26721 973.52715 -4.30 27.89 3240 3240 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High VDLLNQEIEFLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.19 0.00 0 19 25 2 730.90607 1460.80486 3.60 42.37 3242 3242 MS2 14/22 Linfeng_122411_rIgG_1.raw High DVDNAYmIK Unambiguous 1 1 IPI00021304.1 M7(Oxidation) CID 1.0000 0.0000 1 1 258 2.19 0.00 0 24 100 2 542.75415 1084.50102 2.80 23.51 1550 1550 MS2 13/16 Linfeng_20120130_CHD1_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 319 2.19 0.00 0 23 25 2 597.31104 1193.61479 -1.11 52.09 6315 6315 MS2 14/18 Linfeng_091311_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 361 2.18 0.00 0 18 25 2 604.80981 1208.61235 -2.85 29.79 3368 3368 MS2 15/20 Linfeng_091311_rIgG_9.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 205 2.18 0.00 0 12 25 2 390.19299 779.37871 -1.05 15.12 1382 1382 MS2 15/16 Linfeng_091311_rIgG_6.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 217 2.18 0.00 0 7 25 2 390.19250 779.37773 -2.31 14.84 1357 1357 MS2 15/16 Linfeng_091311_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High AAFGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 221 2.17 0.00 0 18 25 2 390.19308 779.37889 -0.82 14.18 1236 1236 MS2 15/16 Linfeng_091311_rIgG_3.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 592 2.16 0.00 0 33 100 2 604.81348 1208.61968 3.21 30.75 2887 2887 MS2 14/20 Linfeng_20120130_CHD1_8.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 587 2.14 0.00 0 7 100 2 604.81396 1208.62065 4.01 29.38 2163 2163 MS2 15/20 Linfeng_20120130_CHD1_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 50 2.14 0.00 0 15 25 2 871.38141 1741.75554 4.01 17.54 1380 1380 MS2 17/44 Linfeng_122411_rIgG_2.raw High GGSGGGGSISGGGYGSGGGSGGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 51 2.13 0.00 0 9 25 2 871.38165 1741.75603 4.29 17.54 1303 1303 MS2 18/44 Linfeng_122411_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 621 2.11 0.00 0 6 25 2 487.27039 973.53349 2.22 21.13 1853 1853 MS2 13/14 Linfeng_122411_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 551 2.11 0.00 0 28 70 2 604.81317 1208.61907 2.70 30.53 2870 2870 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 400 2.10 0.00 0 20 25 2 604.81348 1208.61968 3.21 23.69 1780 1780 MS2 13/20 Linfeng_122411_rIgG_9.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 756 2.10 0.00 0 21 100 2 487.27078 973.53429 3.04 29.47 2174 2174 MS2 13/14 Linfeng_20120130_CHD1_2.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 396 2.10 0.00 0 27 25 2 597.31140 1193.61553 -0.50 49.10 5938 5938 MS2 15/18 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 4 12 2 487.26746 973.52764 -3.80 27.83 2867 2867 MS2 13/14 Linfeng_091311_rIgG_1.raw High GFSSGSAVVSGGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 247 2.09 0.00 0 3 4 2 627.80841 1254.60954 1.73 3.06 282 282 MS2 14/26 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High SLVGLGGTK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 412 2.09 0.00 0 27 25 2 416.25143 831.49559 2.53 19.35 1531 1531 MS2 12/16 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 399 2.09 0.00 0 21 25 2 604.81244 1208.61760 1.49 26.12 2209 2209 MS2 15/20 Linfeng_122411_rIgG_8.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 768 2.09 0.00 0 34 100 2 487.27063 973.53398 2.72 29.18 2375 2375 MS2 13/14 Linfeng_20120130_CHD1_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 391 2.09 0.00 0 43 25 2 604.81390 1208.62053 3.91 21.39 1622 1622 MS2 12/20 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High YEELQVTVGR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 382 2.09 0.00 0 58 25 2 597.31226 1193.61724 0.93 53.50 6473 6473 MS2 14/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High DYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M6(Oxidation) CID 1.0000 0.0000 1 1 289 2.07 0.00 0 12 100 2 578.27277 1155.53826 2.73 24.08 1615 1615 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High STSSFScLSR Unambiguous 1 1 IPI00021304.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.06 0.00 0 25 14 2 566.25702 1131.50676 -2.80 24.29 2388 2388 MS2 16/18 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 628 2.05 0.00 0 5 6 2 487.27060 973.53392 2.66 23.88 1993 1993 MS2 13/14 Linfeng_122411_rIgG_2.raw High HGGGGGGFGGGGFGSR Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 81 2.04 0.00 0 59 25 2 660.79419 1320.58110 -1.37 20.07 1809 1809 MS2 21/30 Linfeng_091311_rIgG_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DVDNAYMIK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 208 2.04 0.00 0 19 25 2 534.75586 1068.50444 1.28 25.36 2183 2183 MS2 13/16 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 658 2.03 0.00 0 31 25 2 487.27039 973.53349 2.22 19.09 1617 1617 MS2 13/14 Linfeng_122411_rIgG_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High GGSISGGGYGSGGGK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 168 2.03 0.00 0 34 25 2 599.27997 1197.55266 2.62 16.24 1302 1302 MS2 18/28 Linfeng_122411_rIgG_6.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 510 2.03 0.00 0 52 100 2 604.81439 1208.62151 4.72 31.05 2702 2702 MS2 13/20 Linfeng_20120130_CHD1_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 598 2.03 0.00 0 43 100 2 604.81415 1208.62102 4.32 31.00 2690 2690 MS2 12/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 559 2.02 0.00 0 1 5 2 487.26843 973.52959 -1.79 4.39 464 464 MS2 12/14 Linfeng_122411_rIgG_8.raw High LQGEIAHVK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 249 2.02 0.00 0 27 25 2 497.78625 994.56523 -2.83 18.15 1786 1786 MS2 15/16 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 380 2.02 0.00 0 6 25 2 487.26999 973.53270 1.41 26.44 2500 2500 MS2 13/14 Linfeng_122411_rIgG_6.raw High DVDNAYMIK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 230 2.02 0.00 0 26 25 2 534.75580 1068.50432 1.17 25.11 2367 2367 MS2 13/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 560 2.01 0.00 0 28 100 2 604.81323 1208.61919 2.80 30.40 2163 2163 MS2 14/20 Linfeng_20120130_CHD1_6.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 689 2.01 0.00 0 15 25 2 487.27081 973.53435 3.10 24.52 2045 2045 MS2 13/14 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.01 0.00 0 11 25 2 487.26993 973.53258 1.28 22.16 1982 1982 MS2 13/14 Linfeng_122411_rIgG_5.raw High TAAENDFVTLK Unambiguous 1 1 IPI00021304.1 CID 1.0000 0.0000 1 1 588 2.01 0.00 0 29 100 2 604.81311 1208.61894 2.60 30.45 2168 2168 MS2 15/20 Linfeng_20120130_CHD1_6.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 416 2.00 0.00 0 39 25 2 487.26990 973.53252 1.22 25.03 2255 2255 MS2 13/14 Linfeng_122411_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00019359.4 "Keratin, type I cytoskeletal 9" 85.23 1 40 41 813 815.15 72.23 29 199 900.94 53.77 29 208 1686.50 58.27 27 406 623 62.0 5.24 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.83 0.00 0 0 100 3 1075.10229 3223.29233 3.28 19.95 1374 1374 MS2 48/156 Linfeng_20120130_CHD1_7.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.49 0.00 0 0 100 3 1075.10095 3223.28830 2.03 19.85 1402 1402 MS2 38/156 Linfeng_20120130_CHD1_9.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.43 0.00 0 0 100 3 1075.10205 3223.29160 3.06 19.40 1279 1279 MS2 52/156 Linfeng_20120130_CHD1_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 20 8.40 0.00 0 0 100 3 1075.10181 3223.29087 2.83 20.11 1330 1330 MS2 46/156 Linfeng_20120130_CHD1_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.24 0.00 0 0 100 3 1075.10083 3223.28794 1.92 19.63 1335 1335 MS2 46/156 Linfeng_20120130_CHD1_5.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 4 8.24 0.00 0 3 25 4 1243.98645 4972.92397 -2.55 18.97 1917 1917 MS2 63/390 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 8.16 0.00 0 2 8 3 1075.09985 3223.28501 1.01 3.83 400 400 MS2 53/156 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.11 0.00 0 0 100 3 1075.10132 3223.28940 2.37 19.68 1339 1339 MS2 49/156 Linfeng_20120130_CHD1_5.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 8.09 0.00 0 1 17 3 1075.09473 3223.26963 -3.76 21.87 2345 2345 MS2 51/156 Linfeng_091311_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 8.02 0.00 0 2 100 3 1075.10193 3223.29123 2.94 20.28 1593 1593 MS2 47/156 Linfeng_20120130_CHD1_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.93 0.00 0 2 25 3 1075.10388 3223.29709 4.76 21.17 1671 1671 MS2 48/156 Linfeng_122411_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 7.90 0.00 0 1 10 3 1075.09399 3223.26743 -4.44 22.17 2357 2357 MS2 50/156 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.79 0.00 0 0 25 3 1075.10217 3223.29197 3.17 21.04 1686 1686 MS2 51/156 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.76 0.00 0 1 100 3 1075.10193 3223.29123 2.94 19.46 1541 1541 MS2 42/156 Linfeng_20120130_CHD1_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.70 0.00 0 1 100 3 1075.10205 3223.29160 3.06 20.68 1617 1617 MS2 43/156 Linfeng_20120130_CHD1_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.69 0.00 0 1 25 3 1075.10217 3223.29197 3.17 21.03 1783 1783 MS2 50/156 Linfeng_122411_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 3 7.68 0.00 0 2 25 3 1075.09705 3223.27658 -1.60 21.82 2301 2301 MS2 52/156 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.61 0.00 0 3 100 3 1075.10144 3223.28977 2.49 19.73 1232 1232 MS2 41/156 Linfeng_20120130_CHD1_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 7.60 0.00 0 0 25 3 1075.09326 3223.26523 -5.13 21.29 1979 1979 MS2 56/156 Linfeng_091311_rIgG_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.57 0.00 0 2 100 3 1075.10242 3223.29270 3.40 19.46 1570 1570 MS2 42/156 Linfeng_20120130_CHD1_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.56 0.00 0 0 100 3 1075.10291 3223.29416 3.85 20.46 1635 1635 MS2 42/156 Linfeng_20120130_CHD1_10.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.53 0.00 0 0 25 3 1075.10156 3223.29013 2.60 20.84 1738 1738 MS2 54/156 Linfeng_122411_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.51 0.00 0 2 100 3 1075.10266 3223.29343 3.62 20.38 1629 1629 MS2 42/156 Linfeng_20120130_CHD1_10.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 386 7.50 0.00 1 9 96 3 656.02679 1966.06583 2.73 48.08 6697 6697 MS2 37/64 Linfeng_20120130_CHD1_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 7.23 0.00 0 2 100 3 1075.10266 3223.29343 3.62 20.36 1274 1274 MS2 45/156 Linfeng_20120130_CHD1_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.20 0.00 0 0 25 3 1075.10120 3223.28904 2.26 21.17 1634 1634 MS2 47/156 Linfeng_122411_rIgG_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 141 7.13 0.00 0 0 21 3 1088.84424 3264.51816 1.28 42.01 4242 4242 MS2 40/112 Linfeng_122411_rIgG_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 390 7.13 0.00 1 13 100 3 656.02808 1966.06968 4.69 48.11 5618 5618 MS2 39/64 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 7.08 0.00 1 14 25 3 656.02600 1966.06345 1.52 35.02 3446 3446 MS2 38/64 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 7.06 0.00 0 0 25 3 1075.10144 3223.28977 2.49 21.20 1554 1554 MS2 48/156 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 394 7.01 0.00 1 8 100 3 656.02753 1966.06803 3.85 48.11 6627 6627 MS2 39/64 Linfeng_20120130_CHD1_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 147 7.00 0.00 0 0 25 3 1088.84497 3264.52036 1.96 41.70 4402 4402 MS2 38/112 Linfeng_122411_rIgG_4.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 153 6.99 0.00 0 1 25 3 1088.84607 3264.52365 2.97 41.89 4314 4314 MS2 39/112 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 116 6.94 0.00 0 0 21 3 837.38403 2510.13755 2.26 33.35 3350 3350 MS2 42/88 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 6.93 0.00 0 8 25 3 837.38434 2510.13846 2.63 33.39 3239 3239 MS2 43/88 Linfeng_122411_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 132 6.91 0.00 0 11 25 3 1088.84143 3264.50974 -1.30 42.50 5034 5034 MS2 38/112 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 45 6.89 0.00 0 3 5 3 902.39459 2705.16922 2.95 36.09 3581 3581 MS2 45/124 Linfeng_122411_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 157 6.88 0.00 0 0 22 3 1088.84619 3264.52402 3.08 42.03 3923 3923 MS2 37/112 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 4 6.87 0.00 0 0 25 4 1243.98840 4972.93178 -0.98 18.12 1747 1747 MS2 67/390 Linfeng_091311_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 149 6.86 0.00 0 19 100 3 902.39288 2705.16410 1.05 43.52 3923 3923 MS2 41/124 Linfeng_20120130_CHD1_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 6.85 0.00 0 0 100 3 1075.10168 3223.29050 2.71 19.79 1243 1243 MS2 42/156 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 456 6.82 0.00 0 3 15 2 919.48480 1837.96233 -1.72 48.36 6549 6549 MS2 26/30 Linfeng_20120130_CHD1_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 6.80 0.00 0 1 25 3 1088.84692 3264.52622 3.75 41.88 4469 4469 MS2 40/112 Linfeng_122411_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 112 6.78 0.00 0 4 25 3 837.38354 2510.13608 1.68 33.65 3443 3443 MS2 43/88 Linfeng_122411_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 106 6.76 0.00 0 1 4 3 837.38147 2510.12986 -0.80 33.33 3488 3488 MS2 42/88 Linfeng_122411_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 6.72 0.00 0 26 25 3 902.39374 2705.16666 2.00 36.19 3348 3348 MS2 45/124 Linfeng_122411_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 6.71 0.00 0 2 4 3 1088.84167 3264.51047 -1.07 41.81 4657 4657 MS2 38/112 Linfeng_122411_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 150 6.66 0.00 0 6 71 3 902.39313 2705.16483 1.32 43.39 5487 5487 MS2 39/124 Linfeng_20120130_CHD1_10.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 396 6.65 0.00 1 17 100 3 656.02667 1966.06546 2.54 48.02 6452 6452 MS2 37/64 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.63 0.00 0 26 100 3 902.39355 2705.16611 1.80 42.84 5778 5778 MS2 38/124 Linfeng_20120130_CHD1_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 209 6.62 0.00 0 1 100 3 837.38556 2510.14212 4.08 41.30 4939 4939 MS2 37/88 Linfeng_20120130_CHD1_4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 392 6.60 0.00 1 9 100 3 656.02667 1966.06546 2.54 48.11 6143 6143 MS2 36/64 Linfeng_20120130_CHD1_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 6.60 0.00 0 2 5 3 1088.84326 3264.51523 0.39 41.90 4301 4301 MS2 39/112 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 128 6.58 0.00 0 13 100 3 902.39008 2705.15567 -2.06 43.64 4175 4175 MS2 40/124 Linfeng_20120130_CHD1_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 390 6.54 0.00 1 12 93 3 656.02655 1966.06510 2.36 48.04 7090 7090 MS2 36/64 Linfeng_20120130_CHD1_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 150 6.54 0.00 0 10 100 3 902.39282 2705.16391 0.98 43.80 4492 4492 MS2 44/124 Linfeng_20120130_CHD1_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 33 6.51 0.00 0 2 25 3 902.39227 2705.16227 0.37 36.02 3546 3546 MS2 46/124 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 6.51 0.00 0 1 25 3 902.39404 2705.16758 2.34 36.28 3771 3771 MS2 47/124 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 128 6.51 0.00 0 13 100 3 902.39001 2705.15549 -2.13 42.94 5203 5203 MS2 46/124 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 143 6.48 0.00 0 17 100 3 902.39246 2705.16281 0.58 43.28 4964 4964 MS2 42/124 Linfeng_20120130_CHD1_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 178 6.48 0.00 0 11 100 3 902.39600 2705.17344 4.50 43.26 4375 4375 MS2 37/124 Linfeng_20120130_CHD1_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 140 6.47 0.00 0 31 100 3 902.39166 2705.16043 -0.30 43.67 3958 3958 MS2 36/124 Linfeng_20120130_CHD1_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 173 6.45 0.00 0 6 100 3 902.39569 2705.17252 4.17 43.26 4522 4522 MS2 36/124 Linfeng_20120130_CHD1_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 7 6.44 0.00 0 28 25 3 1075.10645 3223.30478 7.15 22.56 1846 1846 MS2 42/156 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 206 6.44 0.00 0 4 95 3 837.38513 2510.14084 3.57 41.13 5041 5041 MS2 37/88 Linfeng_20120130_CHD1_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 6.40 0.00 0 7 25 3 1088.83984 3264.50498 -2.75 42.66 5183 5183 MS2 39/112 Linfeng_091311_rIgG_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 145 6.39 0.00 0 17 85 3 902.39227 2705.16227 0.37 43.02 5222 5222 MS2 38/124 Linfeng_20120130_CHD1_1.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 6.38 0.00 0 2 100 3 1075.10193 3223.29123 2.94 20.31 1345 1345 MS2 41/156 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 32 6.37 0.00 0 3 3 3 902.39191 2705.16117 -0.03 36.01 3860 3860 MS2 45/124 Linfeng_122411_rIgG_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 125 6.36 0.00 0 6 7 3 1088.83887 3264.50205 -3.65 42.70 5016 5016 MS2 40/112 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 6.36 0.00 1 8 25 3 656.02661 1966.06528 2.45 35.14 3433 3433 MS2 38/64 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 6.35 0.00 0 8 9 3 902.38812 2705.14981 -4.23 36.87 4379 4379 MS2 45/124 Linfeng_091311_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 109 6.34 0.00 0 2 15 3 837.38232 2510.13242 0.22 33.58 3168 3168 MS2 41/88 Linfeng_122411_rIgG_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 612 6.32 0.00 1 1 72 3 793.07013 2377.19583 3.19 47.02 6430 6430 MS2 37/80 Linfeng_20120130_CHD1_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 389 6.31 0.00 1 8 100 3 656.02765 1966.06839 4.03 48.11 5417 5417 MS2 38/64 Linfeng_20120130_CHD1_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 492 6.30 0.00 2 12 100 4 838.91956 3352.65639 3.72 37.74 3723 3723 MS2 51/180 Linfeng_20120130_CHD1_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 6.27 0.00 0 1 25 3 902.39423 2705.16812 2.54 35.28 3079 3079 MS2 45/124 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 148 6.27 0.00 0 8 100 3 902.39276 2705.16373 0.92 43.90 4665 4665 MS2 38/124 Linfeng_20120130_CHD1_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 118 6.26 0.00 0 4 5 3 837.38440 2510.13864 2.70 33.28 3197 3197 MS2 42/88 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 37 6.24 0.00 0 1 25 3 902.39337 2705.16556 1.59 35.99 3684 3684 MS2 46/124 Linfeng_122411_rIgG_4.raw High GFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTANEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 10 6.23 0.00 0 3 25 4 1216.27783 4862.08950 1.91 45.28 5383 5383 MS2 49/348 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 118 6.23 0.00 0 0 100 2 1353.08582 2705.16435 1.15 43.70 4616 4616 MS2 26/62 Linfeng_20120130_CHD1_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.20 0.00 0 0 25 3 1088.84644 3264.52475 3.30 41.97 4073 4073 MS2 41/112 Linfeng_122411_rIgG_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 139 6.20 0.00 0 8 100 3 902.39172 2705.16062 -0.23 43.83 4648 4648 MS2 36/124 Linfeng_20120130_CHD1_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 6.16 0.00 0 3 3 4 816.88458 3264.51650 0.77 41.88 4299 4299 MS2 44/168 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 92 6.15 0.00 0 0 100 2 1353.08032 2705.15337 -2.91 43.13 5250 5250 MS2 28/62 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 6.14 0.00 0 5 9 3 902.38892 2705.15219 -3.35 37.01 4283 4283 MS2 45/124 Linfeng_091311_rIgG_5.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 6.14 0.00 0 2 25 4 816.88666 3264.52480 3.32 41.88 4313 4313 MS2 43/168 Linfeng_122411_rIgG_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 95 6.14 0.00 0 0 100 2 1353.08105 2705.15483 -2.37 43.31 5295 5295 MS2 26/62 Linfeng_20120130_CHD1_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 117 6.13 0.00 0 0 25 3 837.38446 2510.13883 2.77 33.47 3006 3006 MS2 41/88 Linfeng_122411_rIgG_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 6.13 0.00 0 4 0 3 837.38214 2510.13187 0.00 3.89 389 389 MS2 42/88 Linfeng_122411_rIgG_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 131 6.11 0.00 0 6 5 3 1088.84143 3264.50974 -1.30 42.31 4825 4825 MS2 40/112 Linfeng_091311_rIgG_1.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 6.06 0.00 0 2 8 3 1088.84204 3264.51157 -0.74 42.66 5030 5030 MS2 40/112 Linfeng_091311_rIgG_6.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 6.03 0.00 1 4 23 3 656.02655 1966.06510 2.36 35.17 3580 3580 MS2 39/64 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 153 6.02 0.00 0 16 100 3 902.39349 2705.16593 1.73 43.45 4129 4129 MS2 41/124 Linfeng_20120130_CHD1_7.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 6.02 0.00 1 3 25 3 697.96515 2091.88089 -0.73 15.32 1385 1385 MS2 45/100 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 6.01 0.00 0 0 25 3 1075.10193 3223.29123 2.94 21.15 1855 1855 MS2 44/156 Linfeng_122411_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 155 6.01 0.00 0 6 100 3 902.39343 2705.16574 1.66 43.58 5533 5533 MS2 38/124 Linfeng_20120130_CHD1_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.99 0.00 0 76 59 3 902.39069 2705.15750 -1.38 43.46 5570 5570 MS2 41/124 Linfeng_20120130_CHD1_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.98 0.00 0 16 1 3 837.37952 2510.12400 -3.14 34.18 4027 4027 MS2 43/88 Linfeng_091311_rIgG_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.98 0.00 0 11 25 3 902.38788 2705.14908 -4.50 36.80 4313 4313 MS2 45/124 Linfeng_091311_rIgG_4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 295 5.98 0.00 1 12 8 3 656.02515 1966.06089 0.22 35.01 3723 3723 MS2 39/64 Linfeng_122411_rIgG_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 5.97 0.00 0 17 25 3 837.38416 2510.13791 2.41 33.60 2868 2868 MS2 41/88 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 105 5.97 0.00 0 6 1 3 837.38104 2510.12857 -1.31 34.29 3988 3988 MS2 44/88 Linfeng_091311_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 168 5.93 0.00 0 7 100 3 902.39532 2705.17142 3.76 43.30 4381 4381 MS2 36/124 Linfeng_20120130_CHD1_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 155 5.93 0.00 0 80 100 3 902.39386 2705.16703 2.13 43.41 3902 3902 MS2 37/124 Linfeng_20120130_CHD1_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 101 5.93 0.00 0 0 100 2 1353.08203 2705.15679 -1.65 43.54 5031 5031 MS2 28/62 Linfeng_20120130_CHD1_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 5.90 0.00 0 12 25 3 1088.84229 3264.51230 -0.51 42.44 5031 5031 MS2 40/112 Linfeng_091311_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 121 5.90 0.00 0 0 100 2 1353.08643 2705.16557 1.60 43.67 4460 4460 MS2 27/62 Linfeng_20120130_CHD1_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 212 5.89 0.00 0 14 100 3 837.38574 2510.14267 4.30 41.41 3747 3747 MS2 37/88 Linfeng_20120130_CHD1_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 138 5.88 0.00 0 14 53 3 902.39246 2705.16281 0.58 43.37 5548 5548 MS2 38/124 Linfeng_20120130_CHD1_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 5.87 0.00 0 4 25 4 816.88702 3264.52627 3.77 41.84 4464 4464 MS2 39/168 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 89 5.86 0.00 0 0 97 2 1353.08044 2705.15361 -2.82 43.34 5305 5305 MS2 25/62 Linfeng_20120130_CHD1_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 207 5.86 0.00 0 35 100 3 837.38470 2510.13956 3.06 40.85 4735 4735 MS2 35/88 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 21 5.85 0.00 0 6 6 3 902.38867 2705.15146 -3.62 36.88 4092 4092 MS2 44/124 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 379 5.84 0.00 1 11 100 3 656.02704 1966.06656 3.10 48.15 6449 6449 MS2 38/64 Linfeng_20120130_CHD1_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.84 0.00 0 6 18 3 902.38849 2705.15091 -3.82 37.07 4318 4318 MS2 45/124 Linfeng_091311_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 5.83 0.00 0 10 10 3 902.38910 2705.15274 -3.14 37.14 4340 4340 MS2 48/124 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 5.83 0.00 0 6 25 3 902.39429 2705.16831 2.61 36.35 3213 3213 MS2 45/124 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 215 5.82 0.00 0 32 100 3 837.38458 2510.13919 2.92 40.53 5230 5230 MS2 34/88 Linfeng_20120130_CHD1_5.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 482 5.82 0.00 2 36 100 4 838.91577 3352.64126 -0.80 38.15 3805 3805 MS2 51/180 Linfeng_20120130_CHD1_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 3 5.81 0.00 1 6 25 4 906.11145 3621.42397 -3.53 20.57 2093 2093 MS2 58/258 Linfeng_091311_rIgG_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.81 0.00 0 0 100 2 1353.08838 2705.16948 3.04 43.55 4580 4580 MS2 30/62 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 459 5.79 0.00 0 8 8 2 919.48547 1837.96367 -0.99 48.41 6784 6784 MS2 24/30 Linfeng_20120130_CHD1_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 5.79 0.00 1 13 100 3 793.07019 2377.19602 3.26 47.46 5459 5459 MS2 33/80 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 5.78 0.00 1 3 17 3 656.02362 1966.05631 -2.11 36.02 4195 4195 MS2 39/64 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 5.77 0.00 0 15 25 3 902.39398 2705.16739 2.27 36.22 3454 3454 MS2 42/124 Linfeng_122411_rIgG_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 156 5.76 0.00 0 0 25 3 1088.84631 3264.52439 3.19 41.92 4184 4184 MS2 35/112 Linfeng_122411_rIgG_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 464 5.75 0.00 2 3 100 4 842.91901 3368.65420 4.56 33.82 3262 3262 MS2 44/180 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 5.75 0.00 0 9 99 2 1353.08301 2705.15874 -0.93 43.21 5508 5508 MS2 25/62 Linfeng_20120130_CHD1_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 310 5.75 0.00 0 23 25 2 919.48462 1837.96196 -1.92 38.29 4484 4484 MS2 25/30 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 136 5.75 0.00 0 11 100 3 902.39124 2705.15915 -0.78 43.83 4220 4220 MS2 39/124 Linfeng_20120130_CHD1_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 95 5.74 0.00 0 0 100 2 1353.08093 2705.15459 -2.46 43.16 5257 5257 MS2 26/62 Linfeng_20120130_CHD1_1.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 204 5.73 0.00 0 22 100 3 837.38464 2510.13938 2.99 41.14 4458 4458 MS2 35/88 Linfeng_20120130_CHD1_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 125 5.73 0.00 0 3 7 3 1088.83948 3264.50388 -3.09 42.41 5092 5092 MS2 41/112 Linfeng_091311_rIgG_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 112 5.73 0.00 0 0 100 2 1353.08313 2705.15898 -0.84 43.48 5339 5339 MS2 25/62 Linfeng_20120130_CHD1_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 5.72 0.00 0 1 11 2 919.48560 1837.96391 -0.86 48.42 6227 6227 MS2 24/30 Linfeng_20120130_CHD1_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 520 5.71 0.00 1 0 100 3 971.13873 2911.40165 5.66 30.68 2633 2633 MS2 40/104 Linfeng_20120130_CHD1_1.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 196 5.70 0.00 1 0 25 3 960.79211 2880.36179 2.87 34.23 3345 3345 MS2 37/100 Linfeng_122411_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 499 5.70 0.00 2 6 100 4 838.92053 3352.66030 4.88 37.84 4156 4156 MS2 54/180 Linfeng_20120130_CHD1_1.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 524 5.67 0.00 1 3 100 2 1189.10217 2377.19707 3.71 47.25 6487 6487 MS2 25/40 Linfeng_20120130_CHD1_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 5.67 0.00 1 18 25 3 656.02625 1966.06418 1.89 35.50 3106 3106 MS2 38/64 Linfeng_122411_rIgG_7.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 500 5.65 0.00 2 14 100 4 838.92047 3352.66005 4.81 37.95 4178 4178 MS2 42/180 Linfeng_20120130_CHD1_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 485 5.65 0.00 2 2 100 4 838.91852 3352.65224 2.48 37.99 3605 3605 MS2 43/180 Linfeng_20120130_CHD1_3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 30 5.62 0.00 1 2 25 3 697.96539 2091.88163 -0.38 15.74 1469 1469 MS2 43/100 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.62 0.00 0 1 25 3 1075.10193 3223.29123 2.94 21.19 1566 1566 MS2 46/156 Linfeng_122411_rIgG_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 477 5.61 0.00 2 11 100 4 838.91809 3352.65053 1.97 37.56 4327 4327 MS2 48/180 Linfeng_20120130_CHD1_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 123 5.61 0.00 0 5 100 2 1353.08557 2705.16387 0.97 43.03 5225 5225 MS2 27/62 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.61 0.00 0 9 16 3 902.38855 2705.15110 -3.75 36.77 4318 4318 MS2 41/124 Linfeng_091311_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.61 0.00 0 7 1 3 837.38055 2510.12711 -1.90 34.41 3988 3988 MS2 39/88 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.60 0.00 0 3 100 2 1353.08960 2705.17192 3.94 43.40 4548 4548 MS2 26/62 Linfeng_20120130_CHD1_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 5.59 0.00 0 23 10 3 902.38855 2705.15110 -3.75 37.07 4314 4314 MS2 43/124 Linfeng_091311_rIgG_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 142 5.58 0.00 0 3 25 4 816.88507 3264.51845 1.37 41.85 3900 3900 MS2 47/168 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 172 5.57 0.00 0 20 100 3 902.39569 2705.17252 4.17 43.23 4518 4518 MS2 37/124 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 5.57 0.00 1 18 25 3 656.02667 1966.06546 2.54 32.37 2712 2712 MS2 36/64 Linfeng_122411_rIgG_7.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 482 5.56 0.00 2 8 100 4 838.91931 3352.65542 3.43 37.49 4078 4078 MS2 53/180 Linfeng_20120130_CHD1_1.raw High LASYLDKVQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 240 5.56 0.00 2 13 25 4 832.16406 3325.63442 3.61 44.04 4588 4588 MS2 44/162 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 223 5.55 0.00 0 13 100 3 837.38617 2510.14396 4.81 41.08 5048 5048 MS2 35/88 Linfeng_20120130_CHD1_10.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.55 0.00 0 29 11 3 837.37885 2510.12198 -3.94 34.36 4036 4036 MS2 43/88 Linfeng_091311_rIgG_8.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 295 5.55 0.00 1 18 25 3 656.02509 1966.06070 0.12 35.39 3660 3660 MS2 38/64 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 139 5.54 0.00 0 5 100 3 902.39178 2705.16080 -0.17 43.86 5470 5470 MS2 32/124 Linfeng_20120130_CHD1_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 102 5.54 0.00 0 7 4 3 837.38013 2510.12583 -2.41 34.33 3933 3933 MS2 40/88 Linfeng_091311_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 140 5.54 0.00 0 15 100 2 1353.08850 2705.16973 3.13 43.13 5488 5488 MS2 25/62 Linfeng_20120130_CHD1_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 218 5.53 0.00 0 12 100 3 837.38391 2510.13718 2.11 41.38 3587 3587 MS2 33/88 Linfeng_20120130_CHD1_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.53 0.00 0 0 100 2 1353.08716 2705.16704 2.14 43.52 4145 4145 MS2 26/62 Linfeng_20120130_CHD1_7.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 146 5.52 0.00 0 5 15 4 816.88550 3264.52016 1.90 42.00 4241 4241 MS2 45/168 Linfeng_122411_rIgG_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 5.52 0.00 1 24 100 3 793.07092 2377.19822 4.19 47.51 5272 5272 MS2 33/80 Linfeng_20120130_CHD1_9.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.51 0.00 0 0 100 2 1353.08618 2705.16509 1.42 43.54 5393 5393 MS2 27/62 Linfeng_20120130_CHD1_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 5.51 0.00 1 4 14 3 793.06616 2377.18393 -1.82 36.13 3560 3560 MS2 35/80 Linfeng_122411_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 132 5.51 0.00 0 0 100 2 1353.08813 2705.16899 2.86 43.37 4394 4394 MS2 25/62 Linfeng_20120130_CHD1_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.50 0.00 0 13 5 3 837.37988 2510.12510 -2.70 34.23 3989 3989 MS2 40/88 Linfeng_091311_rIgG_3.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 5.49 0.00 0 0 100 2 1353.08472 2705.16216 0.33 43.75 4201 4201 MS2 26/62 Linfeng_20120130_CHD1_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 5.48 0.00 0 0 100 2 1255.57751 2510.14775 6.33 41.50 4541 4541 MS2 23/44 Linfeng_20120130_CHD1_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 126 5.44 0.00 0 6 5 4 816.88336 3264.51162 -0.72 42.57 5043 5043 MS2 40/168 Linfeng_091311_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 383 5.43 0.00 1 2 25 3 793.07031 2377.19638 3.42 36.12 3701 3701 MS2 35/80 Linfeng_122411_rIgG_4.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.43 0.00 0 4 100 2 1353.08948 2705.17168 3.85 43.21 5443 5443 MS2 28/62 Linfeng_20120130_CHD1_10.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 5.42 0.00 1 5 25 3 793.06879 2377.19181 1.49 36.11 3583 3583 MS2 35/80 Linfeng_122411_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.41 0.00 0 24 25 4 806.57703 3223.28628 1.40 20.85 1820 1820 MS2 53/234 Linfeng_122411_rIgG_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 133 5.41 0.00 0 3 100 2 1353.08691 2705.16655 1.96 43.31 5468 5468 MS2 25/62 Linfeng_20120130_CHD1_10.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 208 5.40 0.00 0 23 100 3 837.38531 2510.14139 3.79 41.85 4945 4945 MS2 38/88 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 117 5.38 0.00 0 0 100 2 1353.08508 2705.16289 0.61 43.72 5435 5435 MS2 24/62 Linfeng_20120130_CHD1_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 103 5.37 0.00 0 16 5 3 837.37964 2510.12436 -2.99 34.21 3723 3723 MS2 41/88 Linfeng_091311_rIgG_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 361 5.37 0.00 0 1 25 3 699.01874 2095.04166 1.91 39.15 3968 3968 MS2 33/64 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 207 5.37 0.00 0 0 100 3 837.38531 2510.14139 3.79 41.71 3633 3633 MS2 32/88 Linfeng_20120130_CHD1_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 211 5.35 0.00 0 44 100 3 837.38409 2510.13773 2.33 40.84 4975 4975 MS2 31/88 Linfeng_20120130_CHD1_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 377 5.34 0.00 1 2 25 3 793.06952 2377.19400 2.42 36.41 3787 3787 MS2 37/80 Linfeng_122411_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 495 5.32 0.00 2 12 100 4 838.91980 3352.65737 4.01 37.96 3766 3766 MS2 52/180 Linfeng_20120130_CHD1_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 453 5.31 0.00 0 3 42 2 793.88940 1586.77153 3.66 25.80 1942 1942 MS2 23/26 Linfeng_20120130_CHD1_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 169 5.29 0.00 0 0 100 2 1255.57520 2510.14311 4.48 41.38 4513 4513 MS2 25/44 Linfeng_20120130_CHD1_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.28 0.00 0 0 25 3 1075.10071 3223.28757 1.81 22.12 1880 1880 MS2 40/156 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 5.26 0.00 0 2 100 2 1255.57446 2510.14165 3.90 40.90 5316 5316 MS2 25/44 Linfeng_20120130_CHD1_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 138 5.26 0.00 0 28 100 3 902.39185 2705.16098 -0.10 43.55 5593 5593 MS2 40/124 Linfeng_20120130_CHD1_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 607 5.26 0.00 1 7 41 3 793.06921 2377.19309 2.03 46.31 6655 6655 MS2 35/80 Linfeng_20120130_CHD1_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 5.26 0.00 0 3 100 2 896.37012 1791.73296 2.88 14.01 944 944 MS2 24/44 Linfeng_20120130_CHD1_5.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.25 0.00 0 0 100 2 1353.08667 2705.16606 1.78 42.96 5806 5806 MS2 25/62 Linfeng_20120130_CHD1_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 443 5.25 0.00 0 4 52 2 919.48724 1837.96721 0.94 48.43 5498 5498 MS2 23/30 Linfeng_20120130_CHD1_9.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.25 0.00 0 5 4 4 816.88312 3264.51064 -1.02 42.40 4837 4837 MS2 43/168 Linfeng_091311_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 164 5.24 0.00 0 22 100 3 902.39484 2705.16996 3.22 43.31 5339 5339 MS2 40/124 Linfeng_20120130_CHD1_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 175 5.23 0.00 0 3 100 2 1255.57642 2510.14556 5.45 40.98 4763 4763 MS2 25/44 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 158 5.21 0.00 0 24 100 3 902.39417 2705.16794 2.47 43.16 5433 5433 MS2 37/124 Linfeng_20120130_CHD1_10.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 134 5.20 0.00 0 0 100 2 1353.08838 2705.16948 3.04 43.45 4409 4409 MS2 28/62 Linfeng_20120130_CHD1_9.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 468 5.20 0.00 2 24 100 4 842.91840 3368.65175 3.83 34.33 2925 2925 MS2 44/180 Linfeng_20120130_CHD1_9.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 213 5.20 0.00 0 25 100 3 837.38458 2510.13919 2.92 41.18 4188 4188 MS2 31/88 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 472 5.19 0.00 0 38 100 2 793.89020 1586.77312 4.66 27.44 1905 1905 MS2 23/26 Linfeng_20120130_CHD1_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 455 5.18 0.00 0 50 100 2 793.88922 1586.77117 3.42 27.22 2067 2067 MS2 23/26 Linfeng_20120130_CHD1_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 477 5.17 0.00 2 23 100 4 838.91803 3352.65029 1.90 37.25 4024 4024 MS2 46/180 Linfeng_20120130_CHD1_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 481 5.17 0.00 2 16 100 4 838.91821 3352.65102 2.11 37.48 4313 4313 MS2 51/180 Linfeng_20120130_CHD1_8.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 216 5.17 0.00 0 12 100 3 837.38458 2510.13919 2.92 41.57 3614 3614 MS2 33/88 Linfeng_20120130_CHD1_6.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 359 5.16 0.00 0 7 25 3 699.01868 2095.04148 1.82 39.16 3564 3564 MS2 34/64 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 297 5.15 0.00 1 11 25 3 656.02338 1966.05558 -2.48 35.90 4198 4198 MS2 37/64 Linfeng_091311_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 469 5.14 0.00 2 0 100 4 842.91821 3368.65102 3.61 34.08 3584 3584 MS2 44/180 Linfeng_20120130_CHD1_8.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 474 5.14 0.00 2 4 100 4 838.91913 3352.65468 3.21 37.97 4402 4402 MS2 51/180 Linfeng_20120130_CHD1_8.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 5.14 0.00 0 2 22 3 699.01605 2095.03360 -1.94 40.20 4745 4745 MS2 32/64 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 5.13 0.00 0 1 25 4 806.57843 3223.29189 3.15 20.87 1741 1741 MS2 56/234 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 485 5.12 0.00 0 3 52 2 793.89063 1586.77397 5.19 25.59 1832 1832 MS2 23/26 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 474 5.12 0.00 0 31 100 2 793.88879 1586.77031 2.89 26.61 1959 1959 MS2 23/26 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 443 5.12 0.00 0 2 100 2 793.88959 1586.77190 3.89 25.91 1865 1865 MS2 23/26 Linfeng_20120130_CHD1_4.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 316 5.10 0.00 1 83 25 3 656.02307 1966.05466 -2.95 36.00 4153 4153 MS2 39/64 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 481 5.10 0.00 0 15 52 3 613.32697 1837.96634 0.46 48.36 7178 7178 MS2 32/60 Linfeng_20120130_CHD1_5.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 5.10 0.00 1 6 25 4 720.84570 2880.36098 2.59 33.97 3429 3429 MS2 48/150 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 212 5.10 0.00 0 16 100 3 837.38409 2510.13773 2.33 41.26 4048 4048 MS2 34/88 Linfeng_20120130_CHD1_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 496 5.10 0.00 2 13 100 4 838.92010 3352.65859 4.37 37.85 3745 3745 MS2 50/180 Linfeng_20120130_CHD1_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 157 5.09 0.00 0 62 100 2 1255.57544 2510.14360 4.67 41.18 5053 5053 MS2 26/44 Linfeng_20120130_CHD1_8.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 148 5.09 0.00 0 4 25 4 816.88611 3264.52260 2.64 41.69 4401 4401 MS2 45/168 Linfeng_122411_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 558 5.09 0.00 1 0 100 2 1189.10266 2377.19805 4.12 47.40 6451 6451 MS2 23/40 Linfeng_20120130_CHD1_10.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 5.09 0.00 1 2 25 4 720.84546 2880.36001 2.25 33.99 3288 3288 MS2 47/150 Linfeng_122411_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 208 5.09 0.00 0 11 100 3 837.38531 2510.14139 3.79 42.18 4699 4699 MS2 37/88 Linfeng_20120130_CHD1_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 480 5.09 0.00 2 16 100 4 838.91919 3352.65493 3.28 37.35 4046 4046 MS2 48/180 Linfeng_20120130_CHD1_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 142 5.09 0.00 0 27 91 3 902.39240 2705.16263 0.51 43.15 5494 5494 MS2 36/124 Linfeng_20120130_CHD1_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 454 5.08 0.00 0 2 100 2 793.88794 1586.76860 1.81 26.12 1823 1823 MS2 23/26 Linfeng_20120130_CHD1_9.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 190 5.08 0.00 1 3 15 4 848.91058 3392.62050 3.41 37.94 3815 3815 MS2 46/174 Linfeng_122411_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 127 5.07 0.00 0 4 5 4 816.88312 3264.51064 -1.02 42.49 5103 5103 MS2 46/168 Linfeng_091311_rIgG_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 616 5.07 0.00 1 15 100 3 793.07068 2377.19748 3.88 46.71 6348 6348 MS2 36/80 Linfeng_20120130_CHD1_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 456 5.07 0.00 0 37 100 2 793.88837 1586.76946 2.35 27.26 2072 2072 MS2 23/26 Linfeng_20120130_CHD1_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 475 5.06 0.00 2 4 100 4 842.91998 3368.65810 5.72 34.10 2836 2836 MS2 41/180 Linfeng_20120130_CHD1_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 173 5.06 0.00 0 0 100 2 1255.57349 2510.13970 3.12 41.44 4529 4529 MS2 23/44 Linfeng_20120130_CHD1_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 497 5.06 0.00 2 20 100 4 838.92023 3352.65908 4.52 37.61 3695 3695 MS2 43/180 Linfeng_20120130_CHD1_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 5.06 0.00 0 11 17 3 613.32471 1837.95957 -3.22 38.03 4477 4477 MS2 30/60 Linfeng_091311_rIgG_3.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 28 5.06 0.00 1 13 25 3 697.96515 2091.88089 -0.73 15.23 1384 1384 MS2 42/100 Linfeng_091311_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 451 5.05 0.00 0 2 92 2 793.88928 1586.77129 3.50 26.08 1752 1752 MS2 23/26 Linfeng_20120130_CHD1_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 5.05 0.00 0 4 100 2 793.88806 1586.76885 1.96 25.76 2147 2147 MS2 23/26 Linfeng_20120130_CHD1_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 467 5.05 0.00 2 18 100 4 842.91852 3368.65224 3.98 33.88 3635 3635 MS2 44/180 Linfeng_20120130_CHD1_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 446 5.05 0.00 0 2 41 2 793.88928 1586.77129 3.50 25.94 1716 1716 MS2 23/26 Linfeng_20120130_CHD1_2.raw High LASYLDKVQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 244 5.04 0.00 2 7 25 4 832.16315 3325.63076 2.51 43.83 4553 4553 MS2 51/162 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 5.04 0.00 0 5 25 2 793.88831 1586.76933 2.27 19.58 1608 1608 MS2 23/26 Linfeng_122411_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 491 5.03 0.00 2 9 100 4 838.91974 3352.65713 3.94 38.09 3793 3793 MS2 51/180 Linfeng_20120130_CHD1_2.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 356 5.03 0.00 0 30 25 3 699.01910 2095.04276 2.43 39.07 4072 4072 MS2 35/64 Linfeng_122411_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 445 5.03 0.00 2 3 100 4 842.91681 3368.64541 1.95 33.71 3500 3500 MS2 45/180 Linfeng_20120130_CHD1_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 5.02 0.00 0 4 100 2 896.37036 1791.73345 3.15 13.95 1233 1233 MS2 22/44 Linfeng_20120130_CHD1_10.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 179 5.02 0.00 1 5 4 4 720.84314 2880.35073 -0.97 3.91 392 392 MS2 41/150 Linfeng_122411_rIgG_7.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 609 5.01 0.00 1 7 100 3 793.06952 2377.19400 2.42 47.77 5153 5153 MS2 36/80 Linfeng_20120130_CHD1_7.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 519 5.00 0.00 2 9 100 4 838.92218 3352.66689 6.85 38.25 4242 4242 MS2 43/180 Linfeng_20120130_CHD1_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 5.00 0.00 0 9 25 2 1048.01978 2095.03227 -2.57 40.25 4818 4818 MS2 25/32 Linfeng_091311_rIgG_2.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 1 5.00 0.00 0 1 25 4 806.57312 3223.27065 -3.44 22.23 2364 2364 MS2 52/234 Linfeng_091311_rIgG_6.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 5.00 0.00 1 4 4 3 793.06769 2377.18851 0.10 36.10 3872 3872 MS2 37/80 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 455 4.98 0.00 0 2 85 2 793.88831 1586.76933 2.27 25.57 1975 1975 MS2 23/26 Linfeng_20120130_CHD1_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 20 4.98 0.00 0 0 25 2 1353.07959 2705.15190 -3.46 36.95 4332 4332 MS2 26/62 Linfeng_091311_rIgG_4.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.97 0.00 0 0 25 4 806.57849 3223.29213 3.22 21.05 1687 1687 MS2 58/234 Linfeng_122411_rIgG_2.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 472 4.96 0.00 2 1 100 4 838.91888 3352.65371 2.92 37.73 4358 4358 MS2 49/180 Linfeng_20120130_CHD1_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 625 4.96 0.00 1 12 100 3 793.06848 2377.19089 1.11 47.71 6031 6031 MS2 39/80 Linfeng_20120130_CHD1_2.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 359 4.96 0.00 0 9 25 3 699.01904 2095.04258 2.34 39.29 3965 3965 MS2 33/64 Linfeng_122411_rIgG_3.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 460 4.95 0.00 2 2 100 4 842.91956 3368.65639 5.21 34.23 2862 2862 MS2 43/180 Linfeng_20120130_CHD1_3.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 4.94 0.00 1 7 18 4 848.90857 3392.61245 1.03 37.86 3403 3403 MS2 42/174 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 459 4.94 0.00 0 1 98 2 793.88928 1586.77129 3.50 26.28 1713 1713 MS2 23/26 Linfeng_20120130_CHD1_3.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 618 4.92 0.00 1 13 100 3 793.07056 2377.19712 3.73 46.68 6107 6107 MS2 34/80 Linfeng_20120130_CHD1_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 465 4.89 0.00 2 13 100 4 842.91913 3368.65468 4.70 34.11 3322 3322 MS2 47/180 Linfeng_20120130_CHD1_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 320 4.88 0.00 0 37 25 2 919.48480 1837.96233 -1.72 38.31 4450 4450 MS2 23/30 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 15 4.88 0.00 0 0 25 2 896.36707 1791.72685 -0.53 17.36 1637 1637 MS2 27/44 Linfeng_091311_rIgG_5.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 191 4.87 0.00 1 9 25 4 848.91028 3392.61928 3.05 37.99 3797 3797 MS2 47/174 Linfeng_122411_rIgG_3.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 466 4.87 0.00 2 13 100 4 842.91925 3368.65517 4.85 34.69 2954 2954 MS2 43/180 Linfeng_20120130_CHD1_3.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 622 4.85 0.00 1 20 100 3 793.06995 2377.19529 2.95 47.50 5089 5089 MS2 32/80 Linfeng_20120130_CHD1_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.84 0.00 0 0 12 2 1353.07935 2705.15141 -3.64 37.01 4110 4110 MS2 27/62 Linfeng_091311_rIgG_1.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 20 4.84 0.00 0 0 25 2 1353.07874 2705.15019 -4.09 36.97 4392 4392 MS2 25/62 Linfeng_091311_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 4.83 0.00 0 6 25 3 597.91589 1791.73313 2.97 16.45 1216 1216 MS2 43/88 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 111 4.83 0.00 0 0 100 2 1353.08240 2705.15752 -1.38 43.67 4181 4181 MS2 24/62 Linfeng_20120130_CHD1_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 4.83 0.00 0 8 8 3 613.32379 1837.95682 -4.72 37.99 4524 4524 MS2 32/60 Linfeng_091311_rIgG_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 612 4.83 0.00 1 14 100 3 793.07019 2377.19602 3.26 47.42 5961 5961 MS2 35/80 Linfeng_20120130_CHD1_2.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 4.83 0.00 1 11 25 3 697.96558 2091.88218 -0.12 15.56 1390 1390 MS2 43/100 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 382 4.82 0.00 0 16 25 3 613.32483 1837.95993 -3.02 38.21 4474 4474 MS2 30/60 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 4.81 0.00 0 0 25 2 1353.08069 2705.15410 -2.64 37.05 4327 4327 MS2 27/62 Linfeng_091311_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 169 4.79 0.00 0 23 100 3 902.39459 2705.16922 2.95 43.44 3908 3908 MS2 36/124 Linfeng_20120130_CHD1_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 458 4.78 0.00 0 29 100 2 793.88831 1586.76933 2.27 27.48 2253 2253 MS2 22/26 Linfeng_20120130_CHD1_5.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 462 4.78 0.00 2 10 100 4 842.91895 3368.65395 4.48 33.63 3226 3226 MS2 48/180 Linfeng_20120130_CHD1_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 497 4.76 0.00 0 6 31 3 613.32745 1837.96781 1.26 48.38 5686 5686 MS2 32/60 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 263 4.76 0.00 0 5 12 3 529.59082 1586.75791 -4.93 26.68 3020 3020 MS2 29/52 Linfeng_091311_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 4.75 0.00 0 9 8 3 613.32471 1837.95957 -3.22 38.04 4251 4251 MS2 30/60 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 489 4.75 0.00 0 2 73 3 613.32672 1837.96561 0.06 48.39 5486 5486 MS2 31/60 Linfeng_20120130_CHD1_9.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 488 4.75 0.00 2 8 100 4 838.91943 3352.65590 3.57 37.91 3587 3587 MS2 46/180 Linfeng_20120130_CHD1_3.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 463 4.74 0.00 2 4 100 4 842.91724 3368.64712 2.45 34.06 2828 2828 MS2 45/180 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 264 4.74 0.00 0 12 25 3 529.59058 1586.75718 -5.39 27.01 2989 2989 MS2 30/52 Linfeng_091311_rIgG_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 506 4.74 0.00 0 2 2 3 613.32611 1837.96378 -0.93 48.36 6547 6547 MS2 30/60 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 4.73 0.00 0 4 25 3 529.59076 1586.75772 -5.05 26.95 3005 3005 MS2 29/52 Linfeng_091311_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 486 4.73 0.00 2 13 100 4 838.91858 3352.65249 2.55 38.26 3829 3829 MS2 47/180 Linfeng_20120130_CHD1_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 74 4.72 0.00 0 0 16 2 1255.56445 2510.12163 -4.08 34.36 3743 3743 MS2 25/44 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 318 4.72 0.00 0 22 25 2 919.48279 1837.95830 -3.91 38.12 4541 4541 MS2 24/30 Linfeng_091311_rIgG_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 364 4.71 0.00 1 4 15 3 793.06409 2377.17771 -4.44 36.91 4327 4327 MS2 36/80 Linfeng_091311_rIgG_4.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 194 4.71 0.00 1 2 14 4 720.84583 2880.36147 2.76 34.15 3335 3335 MS2 44/150 Linfeng_122411_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 4.71 0.00 0 22 25 3 597.91644 1791.73478 3.89 16.30 1327 1327 MS2 40/88 Linfeng_122411_rIgG_4.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 208 4.71 0.00 0 26 100 3 837.38531 2510.14139 3.79 41.34 5419 5419 MS2 35/88 Linfeng_20120130_CHD1_5.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 467 4.71 0.00 2 15 100 4 842.91553 3368.64028 0.43 33.92 2804 2804 MS2 45/180 Linfeng_20120130_CHD1_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 5 25 2 896.36633 1791.72539 -1.35 17.20 1688 1688 MS2 23/44 Linfeng_091311_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 130 4.70 0.00 0 5 9 4 816.88275 3264.50918 -1.47 42.86 5055 5055 MS2 41/168 Linfeng_091311_rIgG_6.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.70 0.00 0 1 25 4 806.57843 3223.29189 3.15 21.12 1548 1548 MS2 50/234 Linfeng_122411_rIgG_7.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 225 4.70 0.00 0 23 100 3 837.38647 2510.14487 5.18 42.16 4194 4194 MS2 30/88 Linfeng_20120130_CHD1_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 4.70 0.00 0 24 100 2 793.88806 1586.76885 1.96 24.79 1786 1786 MS2 21/26 Linfeng_20120130_CHD1_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 161 4.68 0.00 0 0 100 2 1255.57397 2510.14067 3.51 41.05 5353 5353 MS2 25/44 Linfeng_20120130_CHD1_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 172 4.68 0.00 0 0 100 2 1255.57434 2510.14141 3.80 41.38 5100 5100 MS2 20/44 Linfeng_20120130_CHD1_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 4.68 0.00 0 2 25 2 896.37085 1791.73442 3.70 16.28 1325 1325 MS2 23/44 Linfeng_122411_rIgG_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 482 4.68 0.00 2 6 100 4 838.91840 3352.65175 2.33 38.16 4434 4434 MS2 41/180 Linfeng_20120130_CHD1_8.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 373 4.67 0.00 1 15 25 3 793.06909 2377.19272 1.88 35.49 3105 3105 MS2 33/80 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.66 0.00 0 1 25 2 896.36609 1791.72490 -1.62 17.16 1646 1646 MS2 25/44 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 481 4.66 0.00 0 47 100 2 793.88910 1586.77092 3.27 27.40 1897 1897 MS2 22/26 Linfeng_20120130_CHD1_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 471 4.64 0.00 2 10 100 4 842.92017 3368.65883 5.93 34.04 3575 3575 MS2 37/180 Linfeng_20120130_CHD1_8.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 4.63 0.00 0 0 25 2 1353.08691 2705.16655 1.96 36.12 3584 3584 MS2 26/62 Linfeng_122411_rIgG_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 455 4.61 0.00 2 44 100 4 842.91608 3368.64248 1.08 34.53 3045 3045 MS2 39/180 Linfeng_20120130_CHD1_2.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 4.61 0.00 0 0 25 2 1353.08801 2705.16875 2.77 35.45 3100 3100 MS2 23/62 Linfeng_122411_rIgG_7.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 4.60 0.00 0 2 19 2 1353.08313 2705.15898 -0.84 36.14 3561 3561 MS2 26/62 Linfeng_122411_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 4.59 0.00 0 16 25 3 597.91553 1791.73203 2.36 16.49 1325 1325 MS2 40/88 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 479 4.58 0.00 0 2 100 2 793.88873 1586.77019 2.81 25.49 1763 1763 MS2 22/26 Linfeng_20120130_CHD1_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 4.58 0.00 0 4 10 3 529.59094 1586.75827 -4.70 26.83 2729 2729 MS2 28/52 Linfeng_091311_rIgG_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 4.57 0.00 0 11 16 3 699.01538 2095.03159 -2.90 40.22 4814 4814 MS2 31/64 Linfeng_091311_rIgG_2.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 124 4.56 0.00 0 8 25 3 1088.84045 3264.50681 -2.19 42.88 5049 5049 MS2 34/112 Linfeng_091311_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 4.56 0.00 1 23 25 3 968.14142 2902.40970 -0.31 47.61 5651 5651 MS2 29/96 Linfeng_091311_rIgG_6.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 197 4.56 0.00 1 19 25 4 720.84570 2880.36098 2.59 34.28 3521 3521 MS2 41/150 Linfeng_122411_rIgG_6.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 4.55 0.00 0 1 25 3 837.38257 2510.13315 0.51 33.54 3111 3111 MS2 38/88 Linfeng_122411_rIgG_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 456 4.55 0.00 0 0 100 2 793.88898 1586.77068 3.12 24.57 1873 1873 MS2 20/26 Linfeng_20120130_CHD1_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 4.55 0.00 0 19 25 3 597.91650 1791.73496 3.99 16.45 1237 1237 MS2 35/88 Linfeng_122411_rIgG_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 329 4.52 0.00 0 26 25 2 919.48407 1837.96086 -2.52 38.26 4498 4498 MS2 23/30 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 452 4.52 0.00 0 51 100 2 793.88824 1586.76921 2.19 27.31 2213 2213 MS2 22/26 Linfeng_20120130_CHD1_5.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 85 4.52 0.00 0 1 25 2 1255.56628 2510.12529 -2.62 34.33 3993 3993 MS2 24/44 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.51 0.00 0 23 25 3 529.59442 1586.76871 1.88 25.69 2400 2400 MS2 29/52 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 4.51 0.00 0 20 100 2 793.89044 1586.77361 4.96 24.76 2025 2025 MS2 22/26 Linfeng_20120130_CHD1_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 459 4.51 0.00 2 21 100 4 842.91949 3368.65615 5.14 34.34 2883 2883 MS2 42/180 Linfeng_20120130_CHD1_3.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 4.51 0.00 0 3 10 3 613.32770 1837.96854 1.66 37.36 3716 3716 MS2 33/60 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 271 4.50 0.00 0 3 1 2 616.80200 1232.59673 -0.94 3.55 358 358 MS2 25/30 Linfeng_122411_rIgG_6.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 4.50 0.00 1 21 25 3 968.14014 2902.40586 -1.63 47.12 5443 5443 MS2 31/96 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 486 4.50 0.00 0 2 24 3 613.32715 1837.96689 0.76 48.41 5317 5317 MS2 32/60 Linfeng_20120130_CHD1_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 374 4.50 0.00 0 15 25 3 613.32526 1837.96122 -2.33 38.06 4474 4474 MS2 31/60 Linfeng_091311_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 465 4.50 0.00 2 9 100 4 842.91913 3368.65468 4.70 33.73 3244 3244 MS2 44/180 Linfeng_20120130_CHD1_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.49 0.00 0 0 25 2 896.36578 1791.72429 -1.96 17.39 1723 1723 MS2 25/44 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 284 4.49 0.00 0 2 25 2 793.88837 1586.76946 2.35 25.70 2401 2401 MS2 23/26 Linfeng_122411_rIgG_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 357 4.49 0.00 0 2 10 3 613.32794 1837.96927 2.06 37.35 3740 3740 MS2 31/60 Linfeng_122411_rIgG_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 36 4.48 0.00 0 0 100 2 896.37030 1791.73332 3.08 13.82 1192 1192 MS2 23/44 Linfeng_20120130_CHD1_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 4.48 0.00 0 17 100 2 793.88806 1586.76885 1.96 24.90 1714 1714 MS2 22/26 Linfeng_20120130_CHD1_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 4.47 0.00 1 2 7 3 968.14270 2902.41355 1.02 46.50 4897 4897 MS2 36/96 Linfeng_122411_rIgG_3.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 156 4.46 0.00 0 3 25 4 816.88641 3264.52382 3.02 41.90 4181 4181 MS2 46/168 Linfeng_122411_rIgG_10.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 488 4.46 0.00 2 0 100 4 838.91943 3352.65590 3.57 37.94 3536 3536 MS2 46/180 Linfeng_20120130_CHD1_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.46 0.00 0 7 25 2 793.88226 1586.75725 -5.35 26.68 2976 2976 MS2 23/26 Linfeng_091311_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 495 4.46 0.00 0 4 58 3 613.32745 1837.96781 1.26 48.42 5009 5009 MS2 31/60 Linfeng_20120130_CHD1_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.45 0.00 0 0 25 2 793.88470 1586.76213 -2.27 4.77 564 564 MS2 23/26 Linfeng_122411_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 4.45 0.00 1 9 100 3 793.07019 2377.19602 3.26 47.12 6384 6384 MS2 34/80 Linfeng_20120130_CHD1_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 276 4.44 0.00 0 4 25 2 793.88953 1586.77178 3.81 20.62 1718 1718 MS2 22/26 Linfeng_122411_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.43 0.00 0 14 25 3 597.91357 1791.72617 -0.91 17.36 1638 1638 MS2 42/88 Linfeng_091311_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 356 4.43 0.00 0 3 25 3 613.32776 1837.96872 1.76 37.21 3320 3320 MS2 30/60 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 241 4.43 0.00 0 13 25 2 793.88196 1586.75664 -5.73 26.90 2977 2977 MS2 23/26 Linfeng_091311_rIgG_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 332 4.42 0.00 0 24 25 2 919.48517 1837.96306 -1.32 38.13 4490 4490 MS2 22/30 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 4.42 0.00 1 4 24 3 968.14246 2902.41281 0.77 46.73 4833 4833 MS2 32/96 Linfeng_122411_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 38 4.42 0.00 0 5 100 2 896.37048 1791.73369 3.29 13.97 875 875 MS2 22/44 Linfeng_20120130_CHD1_2.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.40 0.00 0 5 25 2 896.36700 1791.72673 -0.60 17.42 1669 1669 MS2 26/44 Linfeng_091311_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.40 0.00 1 1 25 3 968.14575 2902.42270 4.17 46.56 4908 4908 MS2 36/96 Linfeng_122411_rIgG_2.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 80 4.40 0.00 0 3 7 2 1255.56873 2510.13017 -0.68 3.93 395 395 MS2 25/44 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.40 0.00 0 0 25 2 896.36768 1791.72807 0.15 17.42 1648 1648 MS2 23/44 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 478 4.39 0.00 0 0 100 2 793.88916 1586.77104 3.35 25.08 1679 1679 MS2 22/26 Linfeng_20120130_CHD1_7.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 4.39 0.00 0 4 25 2 1048.02051 2095.03374 -1.87 40.23 4753 4753 MS2 26/32 Linfeng_091311_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 15 4.38 0.00 0 6 25 2 896.36664 1791.72600 -1.01 17.51 1479 1479 MS2 23/44 Linfeng_091311_rIgG_1.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 348 4.36 0.00 0 3 25 3 699.01587 2095.03305 -2.20 40.18 4747 4747 MS2 33/64 Linfeng_091311_rIgG_3.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 494 4.35 0.00 2 26 100 4 838.91949 3352.65615 3.64 37.98 3541 3541 MS2 46/180 Linfeng_20120130_CHD1_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 4.35 0.00 0 7 3 3 613.32629 1837.96433 -0.63 37.29 4037 4037 MS2 30/60 Linfeng_122411_rIgG_5.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 4.34 0.00 0 5 8 3 613.32495 1837.96030 -2.82 38.29 4470 4470 MS2 29/60 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 487 4.33 0.00 0 8 100 3 529.59454 1586.76908 2.11 26.11 1897 1897 MS2 28/52 Linfeng_20120130_CHD1_4.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 486 4.33 0.00 2 3 100 4 838.91858 3352.65249 2.55 37.83 4477 4477 MS2 52/180 Linfeng_20120130_CHD1_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 4.33 0.00 0 2 100 2 896.37085 1791.73442 3.70 14.05 1062 1062 MS2 22/44 Linfeng_20120130_CHD1_9.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 462 4.33 0.00 2 10 100 4 842.91931 3368.65542 4.92 34.33 2880 2880 MS2 44/180 Linfeng_20120130_CHD1_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 39 4.32 0.00 0 0 100 2 896.37115 1791.73503 4.04 13.79 909 909 MS2 19/44 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 4.31 0.00 0 9 23 3 529.59088 1586.75809 -4.82 26.84 3031 3031 MS2 28/52 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.31 0.00 0 3 21 2 793.88251 1586.75774 -5.04 26.83 3030 3030 MS2 23/26 Linfeng_091311_rIgG_8.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 462 4.31 0.00 2 75 100 4 842.91895 3368.65395 4.48 34.15 2843 2843 MS2 45/180 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 500 4.30 0.00 0 13 100 3 529.59503 1586.77054 3.03 25.58 1905 1905 MS2 27/52 Linfeng_20120130_CHD1_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 4.29 0.00 0 0 25 2 793.88324 1586.75920 -4.11 26.79 3087 3087 MS2 23/26 Linfeng_091311_rIgG_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 4.29 0.00 1 6 25 3 968.14484 2902.41996 3.23 46.68 5075 5075 MS2 27/96 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 4.29 0.00 0 11 25 3 529.59277 1586.76377 -1.24 4.86 577 577 MS2 29/52 Linfeng_122411_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 468 4.29 0.00 2 12 100 4 842.91840 3368.65175 3.83 34.32 3368 3368 MS2 43/180 Linfeng_20120130_CHD1_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 4.29 0.00 1 4 25 3 617.98163 1851.93033 1.80 36.24 3600 3600 MS2 31/56 Linfeng_122411_rIgG_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 464 4.28 0.00 2 11 100 4 842.91907 3368.65444 4.63 33.79 3255 3255 MS2 47/180 Linfeng_20120130_CHD1_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 256 4.28 0.00 1 18 25 3 968.13989 2902.40512 -1.88 47.71 5763 5763 MS2 29/96 Linfeng_091311_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 4.28 0.00 0 0 25 2 896.37061 1791.73393 3.42 16.30 1342 1342 MS2 23/44 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 284 4.27 0.00 0 4 19 3 529.59204 1586.76157 -2.62 26.74 2992 2992 MS2 28/52 Linfeng_091311_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.27 0.00 0 5 25 3 529.59003 1586.75553 -6.43 26.91 2978 2978 MS2 27/52 Linfeng_091311_rIgG_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 4.27 0.00 0 15 18 3 613.32495 1837.96030 -2.82 38.25 4466 4466 MS2 29/60 Linfeng_091311_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.27 0.00 0 11 25 2 896.36633 1791.72539 -1.35 17.09 1648 1648 MS2 24/44 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 4.27 0.00 1 7 11 3 968.14142 2902.40970 -0.31 46.47 5268 5268 MS2 33/96 Linfeng_122411_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 241 4.27 0.00 0 6 25 2 793.88232 1586.75737 -5.27 26.98 2985 2985 MS2 23/26 Linfeng_091311_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 477 4.26 0.00 0 19 100 3 529.59473 1586.76963 2.45 25.82 1849 1849 MS2 25/52 Linfeng_20120130_CHD1_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 453 4.26 0.00 0 8 100 2 793.88940 1586.77153 3.66 25.11 1738 1738 MS2 21/26 Linfeng_20120130_CHD1_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 466 4.26 0.00 0 21 100 2 793.88989 1586.77251 4.27 24.65 2009 2009 MS2 21/26 Linfeng_20120130_CHD1_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 467 4.24 0.00 2 0 100 4 842.91980 3368.65737 5.50 34.28 3360 3360 MS2 47/180 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 250 4.24 0.00 0 22 25 2 793.88330 1586.75932 -4.04 26.87 2943 2943 MS2 23/26 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 4.24 0.00 0 21 25 3 597.91602 1791.73349 3.18 16.33 1345 1345 MS2 41/88 Linfeng_122411_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.23 0.00 0 17 25 3 597.91345 1791.72580 -1.12 17.46 1654 1654 MS2 35/88 Linfeng_091311_rIgG_9.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.22 0.00 0 6 18 3 597.91309 1791.72470 -1.73 17.24 1658 1658 MS2 43/88 Linfeng_091311_rIgG_4.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 4.22 0.00 0 10 25 2 1048.02063 2095.03398 -1.76 40.23 4748 4748 MS2 25/32 Linfeng_091311_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 278 4.22 0.00 0 4 25 3 529.59106 1586.75864 -4.47 26.81 3090 3090 MS2 29/52 Linfeng_091311_rIgG_10.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 449 4.21 0.00 2 19 100 4 842.91675 3368.64516 1.87 33.69 3495 3495 MS2 42/180 Linfeng_20120130_CHD1_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 435 4.21 0.00 0 47 100 2 793.88965 1586.77202 3.96 26.67 1969 1969 MS2 23/26 Linfeng_20120130_CHD1_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 4.20 0.00 0 4 25 3 597.91321 1791.72507 -1.52 17.48 1711 1711 MS2 45/88 Linfeng_091311_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 236 4.20 0.00 0 7 25 2 793.88269 1586.75810 -4.81 26.78 2723 2723 MS2 23/26 Linfeng_091311_rIgG_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 462 4.16 0.00 0 13 100 3 529.59558 1586.77219 4.07 25.37 1800 1800 MS2 27/52 Linfeng_20120130_CHD1_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.15 0.00 0 7 25 2 896.36713 1791.72698 -0.46 17.37 1696 1696 MS2 24/44 Linfeng_091311_rIgG_6.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 16 4.14 0.00 0 0 25 2 896.36639 1791.72551 -1.28 17.35 1753 1753 MS2 26/44 Linfeng_091311_rIgG_10.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 4.14 0.00 0 3 12 3 613.32806 1837.96964 2.26 37.33 3853 3853 MS2 29/60 Linfeng_122411_rIgG_4.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 379 4.13 0.00 1 20 25 4 595.05383 2377.19350 2.20 35.62 3121 3121 MS2 41/120 Linfeng_122411_rIgG_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 293 4.12 0.00 1 38 25 3 656.02667 1966.06546 2.54 31.27 2573 2573 MS2 29/64 Linfeng_122411_rIgG_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 4.12 0.00 0 4 3 2 616.80029 1232.59331 -3.72 2.16 282 282 MS2 26/30 Linfeng_091311_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 4.11 0.00 0 13 19 3 613.32446 1837.95884 -3.62 38.22 4547 4547 MS2 29/60 Linfeng_091311_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 454 4.11 0.00 0 26 100 2 793.88940 1586.77153 3.66 24.57 1710 1710 MS2 21/26 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 276 4.11 0.00 0 20 25 3 529.59027 1586.75626 -5.97 26.69 2977 2977 MS2 26/52 Linfeng_091311_rIgG_4.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 463 4.10 0.00 2 0 100 4 842.91870 3368.65297 4.19 34.34 3643 3643 MS2 38/180 Linfeng_20120130_CHD1_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 229 4.10 0.00 0 20 25 2 793.88263 1586.75798 -4.88 26.91 3000 3000 MS2 23/26 Linfeng_091311_rIgG_6.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 356 4.08 0.00 0 2 25 3 613.32782 1837.96891 1.86 37.64 3940 3940 MS2 30/60 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 270 4.08 0.00 0 22 15 3 529.59167 1586.76047 -3.32 26.93 2950 2950 MS2 25/52 Linfeng_091311_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 4.08 0.00 0 4 18 3 597.91278 1791.72379 -2.24 17.29 1701 1701 MS2 41/88 Linfeng_091311_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 237 4.06 0.00 0 12 25 2 793.88245 1586.75762 -5.11 26.62 2976 2976 MS2 23/26 Linfeng_091311_rIgG_3.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 466 4.06 0.00 2 4 100 4 842.91925 3368.65517 4.85 33.66 3229 3229 MS2 41/180 Linfeng_20120130_CHD1_1.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 41 4.05 0.00 0 3 100 2 896.37103 1791.73479 3.90 14.01 886 886 MS2 21/44 Linfeng_20120130_CHD1_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 4.05 0.00 0 2 25 4 806.57861 3223.29262 3.37 21.13 1665 1665 MS2 47/234 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 238 4.04 0.00 0 3 25 2 793.88226 1586.75725 -5.35 26.64 3014 3014 MS2 23/26 Linfeng_091311_rIgG_2.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 4.04 0.00 0 23 25 2 616.80090 1232.59453 -2.73 19.42 2003 2003 MS2 26/30 Linfeng_091311_rIgG_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 4.04 0.00 1 0 25 3 968.14496 2902.42032 3.35 46.47 5003 5003 MS2 35/96 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 4.04 0.00 2 19 20 4 666.57666 2663.28481 -3.77 37.90 4512 4512 MS2 34/126 Linfeng_091311_rIgG_2.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 613 4.03 0.00 0 5 100 2 658.34918 1315.69109 4.41 31.31 2751 2751 MS2 20/22 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 459 4.02 0.00 0 8 100 2 793.88898 1586.77068 3.12 25.27 1621 1621 MS2 22/26 Linfeng_20120130_CHD1_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 272 4.00 0.00 0 12 25 2 616.80133 1232.59538 -2.03 19.53 2065 2065 MS2 27/30 Linfeng_091311_rIgG_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 439 3.99 0.00 0 8 100 2 616.80334 1232.59941 1.23 15.71 1341 1341 MS2 23/30 Linfeng_20120130_CHD1_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 428 3.99 0.00 0 19 100 2 793.88953 1586.77178 3.81 24.93 1607 1607 MS2 22/26 Linfeng_20120130_CHD1_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 449 3.98 0.00 2 0 100 4 842.91772 3368.64907 3.03 34.14 3597 3597 MS2 43/180 Linfeng_20120130_CHD1_8.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 344 3.98 0.00 0 13 22 3 699.01593 2095.03324 -2.11 40.39 4721 4721 MS2 34/64 Linfeng_091311_rIgG_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 271 3.97 0.00 0 16 25 2 616.80151 1232.59575 -1.74 19.62 1978 1978 MS2 24/30 Linfeng_091311_rIgG_7.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 416 3.95 0.00 1 4 84 4 848.90851 3392.61220 0.96 48.18 6645 6645 MS2 41/174 Linfeng_20120130_CHD1_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 496 3.93 0.00 0 25 100 3 529.59479 1586.76981 2.57 25.77 1841 1841 MS2 28/52 Linfeng_20120130_CHD1_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 258 3.93 0.00 1 26 25 3 968.13995 2902.40531 -1.82 47.72 5655 5655 MS2 32/96 Linfeng_091311_rIgG_7.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 481 3.91 0.00 0 1 8 3 613.32690 1837.96616 0.36 48.44 6525 6525 MS2 29/60 Linfeng_20120130_CHD1_4.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 44 3.91 0.00 1 0 25 3 733.65125 2198.93918 -2.50 20.98 2196 2196 MS2 39/96 Linfeng_091311_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 480 3.89 0.00 2 2 100 4 838.91925 3352.65517 3.35 37.81 3520 3520 MS2 39/180 Linfeng_20120130_CHD1_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 272 3.88 0.00 0 5 25 2 616.80127 1232.59526 -2.13 19.33 1951 1951 MS2 27/30 Linfeng_091311_rIgG_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 322 3.88 0.00 0 24 25 2 616.80481 1232.60234 3.61 18.49 1505 1505 MS2 21/30 Linfeng_122411_rIgG_6.raw High GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 34 3.87 0.00 0 0 25 2 1353.08911 2705.17095 3.58 36.16 3706 3706 MS2 23/62 Linfeng_122411_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 18 3.87 0.00 0 18 25 3 597.91278 1791.72379 -2.24 17.42 1727 1727 MS2 42/88 Linfeng_091311_rIgG_8.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 489 3.87 0.00 0 2 3 3 613.32672 1837.96561 0.06 48.42 6224 6224 MS2 29/60 Linfeng_20120130_CHD1_2.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 467 3.86 0.00 2 18 100 4 842.91852 3368.65224 3.98 33.98 3657 3657 MS2 38/180 Linfeng_20120130_CHD1_10.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 3.85 0.00 0 4 25 2 896.37048 1791.73369 3.29 16.40 1212 1212 MS2 25/44 Linfeng_122411_rIgG_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 3.83 0.00 0 44 25 2 793.89032 1586.77336 4.81 21.66 1829 1829 MS2 18/26 Linfeng_122411_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 3.82 0.00 0 5 25 3 613.32764 1837.96836 1.56 37.60 3629 3629 MS2 27/60 Linfeng_122411_rIgG_10.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 574 3.82 0.00 0 7 100 2 658.34967 1315.69206 5.16 31.82 2549 2549 MS2 20/22 Linfeng_20120130_CHD1_2.raw High QEIEcQNQEYSLLLSIK Unambiguous 1 1 IPI00019359.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 3.81 0.00 0 72 23 3 699.01581 2095.03287 -2.29 40.33 4560 4560 MS2 30/64 Linfeng_091311_rIgG_1.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 240 3.80 0.00 0 17 25 2 616.80005 1232.59282 -4.11 19.50 1943 1943 MS2 26/30 Linfeng_091311_rIgG_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 250 3.80 0.00 1 9 18 3 968.13892 2902.40219 -2.89 47.68 5648 5648 MS2 30/96 Linfeng_091311_rIgG_5.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.79 0.00 0 0 25 2 793.88934 1586.77141 3.58 25.84 1961 1961 MS2 20/26 Linfeng_122411_rIgG_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 586 3.79 0.00 0 20 100 2 658.34784 1315.68840 2.37 31.28 2983 2983 MS2 19/22 Linfeng_20120130_CHD1_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNKTLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 205 3.78 0.00 2 17 25 4 986.74823 3943.97109 3.80 48.82 5193 5193 MS2 36/198 Linfeng_122411_rIgG_3.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 3.78 0.00 0 0 25 4 806.57831 3223.29140 2.99 20.97 1776 1776 MS2 47/234 Linfeng_122411_rIgG_6.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 3.78 0.00 0 8 100 2 658.34882 1315.69036 3.86 31.69 2394 2394 MS2 18/22 Linfeng_20120130_CHD1_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 454 3.78 0.00 0 7 100 2 616.80463 1232.60198 3.31 17.56 1451 1451 MS2 19/30 Linfeng_20120130_CHD1_10.raw High DIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 400 3.77 0.00 0 0 4 3 1088.84204 3264.51157 -0.74 48.52 5732 5732 MS2 26/112 Linfeng_20120130_CHD1_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 461 3.76 0.00 0 12 100 2 616.80450 1232.60173 3.12 17.45 1417 1417 MS2 22/30 Linfeng_20120130_CHD1_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 3.75 0.00 0 12 25 2 616.80103 1232.59477 -2.53 19.28 1957 1957 MS2 25/30 Linfeng_091311_rIgG_3.raw High EIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 113 3.75 0.00 0 0 25 3 837.38544 2510.14176 3.94 33.46 2419 2419 MS2 29/88 Linfeng_122411_rIgG_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 488 3.75 0.00 0 4 100 3 613.32715 1837.96689 0.76 48.40 6703 6703 MS2 28/60 Linfeng_20120130_CHD1_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 425 3.74 0.00 0 0 100 2 616.80280 1232.59831 0.34 15.59 1303 1303 MS2 19/30 Linfeng_20120130_CHD1_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 255 3.73 0.00 1 17 22 3 968.13965 2902.40439 -2.14 47.37 5723 5723 MS2 30/96 Linfeng_091311_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.72 0.00 0 12 25 3 529.59424 1586.76816 1.53 20.74 1729 1729 MS2 28/52 Linfeng_122411_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 253 3.71 0.00 1 22 25 3 968.13879 2902.40183 -3.02 47.46 5659 5659 MS2 29/96 Linfeng_091311_rIgG_4.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.71 0.00 0 7 25 2 896.37067 1791.73406 3.49 16.58 1305 1305 MS2 20/44 Linfeng_122411_rIgG_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 473 3.69 0.00 0 55 100 2 793.88910 1586.77092 3.27 26.76 1982 1982 MS2 22/26 Linfeng_20120130_CHD1_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 462 3.69 0.00 2 12 100 4 842.91937 3368.65566 4.99 34.58 3417 3417 MS2 43/180 Linfeng_20120130_CHD1_1.raw High NRKDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 206 3.68 0.00 2 4 25 5 733.35797 3662.76075 2.12 36.94 3688 3688 MS2 51/248 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 3.68 0.00 1 23 25 3 656.02368 1966.05649 -2.02 35.92 4208 4208 MS2 29/64 Linfeng_091311_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 268 3.67 0.00 1 5 25 4 726.35742 2902.40786 -0.94 47.79 5664 5664 MS2 33/144 Linfeng_091311_rIgG_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 273 3.67 0.00 0 27 25 2 616.80054 1232.59380 -3.32 19.57 2032 2032 MS2 27/30 Linfeng_091311_rIgG_8.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 470 3.67 0.00 2 11 100 4 842.92090 3368.66176 6.80 34.14 2972 2972 MS2 42/180 Linfeng_20120130_CHD1_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.66 0.00 0 15 25 3 529.59448 1586.76889 1.99 19.72 1620 1620 MS2 26/52 Linfeng_122411_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 3.64 0.00 0 10 16 3 613.32452 1837.95902 -3.52 38.17 4431 4431 MS2 28/60 Linfeng_091311_rIgG_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 269 3.64 0.00 1 1 17 4 726.35748 2902.40810 -0.86 47.54 5669 5669 MS2 34/144 Linfeng_091311_rIgG_4.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.63 0.00 0 43 25 2 616.80023 1232.59319 -3.82 19.62 1961 1961 MS2 26/30 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 281 3.63 0.00 0 0 25 2 793.88922 1586.77117 3.42 18.54 1512 1512 MS2 20/26 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 501 3.63 0.00 0 18 100 3 529.59521 1586.77109 3.38 25.66 1683 1683 MS2 26/52 Linfeng_20120130_CHD1_2.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 3.60 0.00 0 21 25 3 529.59473 1586.76963 2.45 16.61 1352 1352 MS2 25/52 Linfeng_122411_rIgG_4.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.60 0.00 0 2 25 2 793.88574 1586.76421 -0.96 4.17 454 454 MS2 22/26 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 493 3.60 0.00 0 2 57 3 613.32648 1837.96488 -0.33 48.39 6777 6777 MS2 28/60 Linfeng_20120130_CHD1_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 22 3.59 0.00 0 6 25 2 896.37109 1791.73491 3.97 16.45 1322 1322 MS2 19/44 Linfeng_122411_rIgG_6.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 602 3.59 0.00 0 11 100 2 658.34918 1315.69109 4.41 31.78 2412 2412 MS2 19/22 Linfeng_20120130_CHD1_3.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 578 3.58 0.00 1 24 100 3 436.56601 1307.68348 4.42 36.03 4124 4124 MS2 21/36 Linfeng_20120130_CHD1_10.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.58 0.00 0 0 19 2 793.88562 1586.76396 -1.11 4.23 463 463 MS2 23/26 Linfeng_122411_rIgG_3.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 267 3.56 0.00 1 11 25 3 968.14081 2902.40787 -0.94 47.36 5648 5648 MS2 32/96 Linfeng_091311_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 17 3.55 0.00 0 17 25 3 597.91339 1791.72562 -1.22 17.14 1654 1654 MS2 40/88 Linfeng_091311_rIgG_3.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 363 3.54 0.00 1 13 25 3 793.06409 2377.17771 -4.44 37.05 4288 4288 MS2 33/80 Linfeng_091311_rIgG_5.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 600 3.53 0.00 1 27 100 3 793.06958 2377.19419 2.49 47.26 5923 5923 MS2 31/80 Linfeng_20120130_CHD1_2.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 3.53 0.00 1 41 25 3 968.14142 2902.40970 -0.31 51.41 6153 6153 MS2 25/96 Linfeng_091311_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 298 3.52 0.00 1 3 9 4 726.35913 2902.41469 1.41 46.51 4898 4898 MS2 34/144 Linfeng_122411_rIgG_3.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 494 3.52 0.00 2 5 100 3 888.43860 2663.30124 2.40 48.12 6709 6709 MS2 26/84 Linfeng_20120130_CHD1_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.51 0.00 1 5 25 4 726.35730 2902.40737 -1.11 47.76 5662 5662 MS2 35/144 Linfeng_091311_rIgG_9.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 550 3.50 0.00 1 33 100 3 441.89636 1323.67453 1.45 26.37 2159 2159 MS2 21/36 Linfeng_20120130_CHD1_8.raw High GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 5 3.49 0.00 0 10 25 4 806.57886 3223.29360 3.68 21.12 1560 1560 MS2 44/234 Linfeng_122411_rIgG_9.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 563 3.49 0.00 0 13 100 2 658.34894 1315.69060 4.04 31.31 2439 2439 MS2 17/22 Linfeng_20120130_CHD1_9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 306 3.48 0.00 1 6 25 3 968.14471 2902.41959 3.10 46.67 4512 4512 MS2 25/96 Linfeng_122411_rIgG_7.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.48 0.00 0 0 25 2 896.37103 1791.73479 3.90 16.39 1210 1210 MS2 22/44 Linfeng_122411_rIgG_9.raw High KDIENQYETQITQIEHEVSSSGQEVQSSAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 407 3.46 0.00 1 10 38 4 848.90869 3392.61294 1.18 48.16 7122 7122 MS2 34/174 Linfeng_20120130_CHD1_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 309 3.45 0.00 1 0 25 4 726.36047 2902.42006 3.26 46.48 5005 5005 MS2 35/144 Linfeng_122411_rIgG_4.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 3.45 0.00 0 23 25 3 613.32495 1837.96030 -2.82 38.25 4622 4622 MS2 27/60 Linfeng_091311_rIgG_10.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 266 3.45 0.00 2 20 22 4 666.57629 2663.28335 -4.32 38.05 4454 4454 MS2 36/126 Linfeng_091311_rIgG_6.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.45 0.00 0 16 25 2 616.80164 1232.59599 -1.54 19.55 1999 1999 MS2 24/30 Linfeng_091311_rIgG_6.raw High NHKEEMSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 472 3.44 0.00 2 2 100 4 838.91888 3352.65371 2.92 38.16 3638 3638 MS2 42/180 Linfeng_20120130_CHD1_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 342 3.44 0.00 0 6 25 2 616.80450 1232.60173 3.12 18.49 1356 1356 MS2 21/30 Linfeng_122411_rIgG_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 3.43 0.00 0 4 100 2 658.34784 1315.68840 2.37 31.17 3036 3036 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 3.42 0.00 1 9 22 4 726.35712 2902.40664 -1.36 47.74 5767 5767 MS2 32/144 Linfeng_091311_rIgG_8.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 30 3.42 0.00 1 29 25 3 697.96436 2091.87851 -1.87 15.56 1457 1457 MS2 35/100 Linfeng_091311_rIgG_2.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 626 3.41 0.00 0 26 100 2 658.34918 1315.69109 4.41 31.27 2885 2885 MS2 18/22 Linfeng_20120130_CHD1_4.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 29 3.41 0.00 1 19 25 3 697.96466 2091.87943 -1.43 15.61 1469 1469 MS2 37/100 Linfeng_091311_rIgG_8.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 274 3.40 0.00 1 5 16 4 726.35760 2902.40859 -0.69 47.22 5457 5457 MS2 38/144 Linfeng_091311_rIgG_1.raw High FSSSGGGGGGGRFSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 57 3.39 0.00 1 11 25 3 733.65442 2198.94870 1.83 19.98 1664 1664 MS2 31/96 Linfeng_122411_rIgG_6.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 181 3.39 0.00 1 9 25 4 720.84241 2880.34780 -1.98 34.66 4037 4037 MS2 37/150 Linfeng_091311_rIgG_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 3.38 0.00 1 11 17 3 617.98059 1851.92722 0.12 36.14 3878 3878 MS2 31/56 Linfeng_122411_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 3.37 0.00 0 11 25 2 896.37054 1791.73381 3.35 16.55 1240 1240 MS2 23/44 Linfeng_122411_rIgG_1.raw High NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 565 3.35 0.00 1 38 100 4 724.60602 2895.40224 4.14 35.00 3509 3509 MS2 36/156 Linfeng_20120130_CHD1_1.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 263 3.35 0.00 2 19 8 4 666.57886 2663.29360 -0.47 37.19 4023 4023 MS2 38/126 Linfeng_122411_rIgG_5.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 499 3.33 0.00 0 9 25 2 658.34735 1315.68743 1.63 29.64 2868 2868 MS2 19/22 Linfeng_122411_rIgG_4.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 288 3.31 0.00 1 4 11 4 726.35852 2902.41225 0.57 46.48 5269 5269 MS2 35/144 Linfeng_122411_rIgG_5.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 23 3.31 0.00 0 0 25 3 597.91595 1791.73331 3.07 16.54 1239 1239 MS2 34/88 Linfeng_122411_rIgG_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.30 0.00 1 15 25 4 726.35785 2902.40957 -0.35 47.73 5825 5825 MS2 35/144 Linfeng_091311_rIgG_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.30 0.00 0 33 25 2 616.80121 1232.59514 -2.23 19.64 1751 1751 MS2 21/30 Linfeng_091311_rIgG_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 521 3.29 0.00 1 18 100 4 728.60327 2911.39126 2.09 30.13 2780 2780 MS2 43/156 Linfeng_20120130_CHD1_5.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 402 3.27 0.00 0 12 25 2 658.34448 1315.68169 -2.73 31.25 3592 3592 MS2 19/22 Linfeng_091311_rIgG_4.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 591 3.27 0.00 0 15 100 2 658.34772 1315.68816 2.19 31.41 2235 2235 MS2 17/22 Linfeng_20120130_CHD1_7.raw High HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 3.25 0.00 1 32 25 3 656.02594 1966.06327 1.43 33.40 2843 2843 MS2 31/64 Linfeng_122411_rIgG_7.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 3.24 0.00 1 16 25 4 726.36163 2902.42470 4.86 46.53 4905 4905 MS2 34/144 Linfeng_122411_rIgG_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 3.24 0.00 0 21 25 3 613.32703 1837.96653 0.56 37.77 3712 3712 MS2 25/60 Linfeng_122411_rIgG_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 3.23 0.00 0 41 25 2 616.80426 1232.60124 2.72 18.32 1538 1538 MS2 20/30 Linfeng_122411_rIgG_5.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 306 3.23 0.00 1 19 25 3 968.14423 2902.41812 2.60 46.69 4678 4678 MS2 20/96 Linfeng_122411_rIgG_9.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 3.21 0.00 0 26 100 2 658.34802 1315.68877 2.65 31.21 2874 2874 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 119 3.20 0.00 0 7 100 2 618.26990 1235.53252 3.04 14.96 1265 1265 MS2 18/24 Linfeng_20120130_CHD1_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 521 3.19 0.00 0 4 65 2 579.30115 1157.59502 3.48 26.33 1717 1717 MS2 16/20 Linfeng_20120130_CHD1_3.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 492 3.19 0.00 0 20 25 2 658.34772 1315.68816 2.19 29.55 2742 2742 MS2 19/22 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 367 3.17 0.00 1 2 25 3 617.98138 1851.92960 1.40 36.49 3798 3798 MS2 31/56 Linfeng_122411_rIgG_6.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 215 3.17 0.00 1 24 25 3 845.73987 2535.20505 2.04 38.54 3891 3891 MS2 26/80 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 440 3.16 0.00 0 2 100 2 579.30072 1157.59416 2.74 26.38 1930 1930 MS2 17/20 Linfeng_20120130_CHD1_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 257 3.15 0.00 1 15 25 3 968.13959 2902.40421 -2.20 47.67 5651 5651 MS2 28/96 Linfeng_091311_rIgG_9.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 277 3.13 0.00 2 17 25 4 666.58075 2663.30117 2.37 37.26 3703 3703 MS2 38/126 Linfeng_122411_rIgG_3.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 376 3.13 0.00 1 6 25 3 617.98206 1851.93161 2.49 36.21 3712 3712 MS2 31/56 Linfeng_122411_rIgG_4.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 578 3.13 0.00 1 2 44 3 623.31476 1867.92972 4.18 36.16 3779 3779 MS2 24/56 Linfeng_20120130_CHD1_1.raw High LEKEIETYHNLLEGGQEDFESSGAGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 442 3.13 0.00 1 32 100 4 720.84778 2880.36928 5.48 45.24 5766 5766 MS2 39/150 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 700 3.12 0.00 0 3 48 2 530.78723 1060.56719 3.61 30.90 2984 2984 MS2 15/16 Linfeng_20120130_CHD1_10.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 454 3.12 0.00 0 14 100 2 616.80481 1232.60234 3.61 15.48 1021 1021 MS2 20/30 Linfeng_20120130_CHD1_1.raw High GSRGGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 40 3.11 0.00 1 19 25 3 697.96661 2091.88529 1.37 15.67 1403 1403 MS2 30/100 Linfeng_091311_rIgG_9.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 3.11 0.00 1 2 25 4 726.35931 2902.41543 1.67 46.84 4848 4848 MS2 35/144 Linfeng_122411_rIgG_8.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 3.09 0.00 2 10 25 4 666.58014 2663.29873 1.45 37.19 3318 3318 MS2 39/126 Linfeng_122411_rIgG_7.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 515 3.09 0.00 0 61 100 2 579.30157 1157.59587 4.22 28.96 2339 2339 MS2 14/20 Linfeng_20120130_CHD1_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGKDLTK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 456 3.08 0.00 2 16 100 4 842.91754 3368.64834 2.82 35.00 3010 3010 MS2 35/180 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 303 3.08 0.00 0 18 25 3 529.59473 1586.76963 2.45 25.83 1960 1960 MS2 22/52 Linfeng_122411_rIgG_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 561 3.07 0.00 0 27 100 2 658.34857 1315.68987 3.49 30.82 2382 2382 MS2 18/22 Linfeng_20120130_CHD1_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 556 3.07 0.00 1 6 75 3 623.31378 1867.92679 2.61 35.83 3986 3986 MS2 27/56 Linfeng_20120130_CHD1_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 25 3.05 0.00 0 16 25 3 597.91614 1791.73386 3.38 16.43 1213 1213 MS2 37/88 Linfeng_122411_rIgG_9.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 608 3.05 0.00 1 2 100 2 926.46912 1851.93096 2.14 48.13 5422 5422 MS2 18/28 Linfeng_20120130_CHD1_9.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 469 3.05 0.00 0 20 100 2 616.80487 1232.60246 3.71 17.41 1145 1145 MS2 18/30 Linfeng_20120130_CHD1_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 60 3.03 0.00 0 4 1 2 618.26569 1235.52410 -3.78 1.75 218 218 MS2 22/24 Linfeng_091311_rIgG_1.raw High NHKEEmSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 524 3.03 0.00 1 24 100 4 728.60345 2911.39199 2.34 30.24 2806 2806 MS2 33/156 Linfeng_20120130_CHD1_5.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 403 3.02 0.00 1 27 25 3 436.56503 1307.68055 2.18 26.74 2340 2340 MS2 23/36 Linfeng_122411_rIgG_3.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 495 3.01 0.00 1 20 100 2 934.46893 1867.93059 4.64 36.16 3936 3936 MS2 16/28 Linfeng_20120130_CHD1_4.raw High VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 282 3.01 0.00 2 16 25 4 666.58087 2663.30166 2.55 37.23 3724 3724 MS2 37/126 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 364 3.01 0.00 1 3 8 3 617.98151 1851.92997 1.60 36.22 3571 3571 MS2 30/56 Linfeng_122411_rIgG_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 3.00 0.00 0 13 25 2 896.37183 1791.73638 4.79 16.38 1232 1232 MS2 19/44 Linfeng_122411_rIgG_8.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 311 2.99 0.00 0 38 25 3 529.59497 1586.77036 2.92 18.70 1526 1526 MS2 23/52 Linfeng_122411_rIgG_4.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 375 2.99 0.00 1 2 25 3 617.98199 1851.93143 2.39 35.59 3118 3118 MS2 32/56 Linfeng_122411_rIgG_7.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 428 2.99 0.00 0 21 25 2 658.34479 1315.68230 -2.27 31.28 3644 3644 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 622 2.98 0.00 1 9 100 2 926.46985 1851.93242 2.93 46.84 6781 6781 MS2 19/28 Linfeng_20120130_CHD1_5.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 591 2.97 0.00 1 33 100 3 441.89725 1323.67719 3.45 21.44 1343 1343 MS2 23/36 Linfeng_20120130_CHD1_2.raw High DQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 411 2.96 0.00 0 31 25 2 658.34412 1315.68096 -3.29 31.46 3604 3604 MS2 19/22 Linfeng_091311_rIgG_6.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 341 2.96 0.00 0 0 25 2 616.80444 1232.60161 3.02 18.45 1354 1354 MS2 19/30 Linfeng_122411_rIgG_9.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 580 2.96 0.00 1 12 100 4 724.60455 2895.39638 2.11 35.10 3816 3816 MS2 30/156 Linfeng_20120130_CHD1_8.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 329 2.96 0.00 0 24 25 2 616.80487 1232.60246 3.71 18.57 1460 1460 MS2 23/30 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 451 2.95 0.00 0 5 100 2 579.30164 1157.59599 4.32 26.32 1758 1758 MS2 17/20 Linfeng_20120130_CHD1_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 490 2.95 0.00 0 6 100 2 579.30145 1157.59563 4.01 26.54 1782 1782 MS2 16/20 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 2.93 0.00 0 12 100 2 618.27008 1235.53288 3.34 13.92 919 919 MS2 15/24 Linfeng_20120130_CHD1_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 2.92 0.00 0 10 100 2 618.26971 1235.53215 2.74 13.95 1201 1201 MS2 17/24 Linfeng_20120130_CHD1_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 2.92 0.00 0 7 100 2 618.27069 1235.53411 4.33 14.93 986 986 MS2 17/24 Linfeng_20120130_CHD1_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 107 2.92 0.00 0 7 100 2 618.27032 1235.53337 3.73 14.98 938 938 MS2 18/24 Linfeng_20120130_CHD1_2.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 463 2.91 0.00 0 3 24 2 919.48566 1837.96404 -0.79 48.45 6717 6717 MS2 15/30 Linfeng_20120130_CHD1_10.raw Medium NHKEEMSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 563 2.90 0.00 1 31 100 4 724.60553 2895.40029 3.46 34.96 3497 3497 MS2 35/156 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 495 2.89 0.00 0 5 100 2 579.30157 1157.59587 4.22 25.91 1713 1713 MS2 17/20 Linfeng_20120130_CHD1_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 564 2.89 0.00 1 14 100 3 623.31348 1867.92588 2.12 36.10 2898 2898 MS2 22/56 Linfeng_20120130_CHD1_7.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 312 2.89 0.00 0 17 25 3 529.59509 1586.77073 3.15 17.68 1438 1438 MS2 25/52 Linfeng_122411_rIgG_4.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 2.88 0.00 1 6 25 4 726.35785 2902.40957 -0.35 47.38 5724 5724 MS2 36/144 Linfeng_091311_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 447 2.88 0.00 0 2 51 2 579.30170 1157.59612 4.43 25.77 1853 1853 MS2 17/20 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 504 2.87 0.00 0 7 100 2 579.30139 1157.59551 3.90 25.63 1836 1836 MS2 17/20 Linfeng_20120130_CHD1_1.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 524 2.87 0.00 2 41 99 4 666.58112 2663.30263 2.92 48.09 7103 7103 MS2 35/126 Linfeng_20120130_CHD1_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 491 2.85 0.00 0 3 80 2 579.30151 1157.59575 4.11 26.14 1898 1898 MS2 17/20 Linfeng_20120130_CHD1_1.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 12 25 3 613.32867 1837.97147 3.25 37.72 3540 3540 MS2 24/60 Linfeng_122411_rIgG_9.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 613 2.83 0.00 1 23 100 2 926.46844 1851.92961 1.41 47.47 6299 6299 MS2 19/28 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 544 2.82 0.00 0 3 100 2 579.30103 1157.59477 3.27 26.30 2238 2238 MS2 17/20 Linfeng_20120130_CHD1_10.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 623 2.81 0.00 1 4 44 3 617.98187 1851.93106 2.19 48.06 6693 6693 MS2 26/56 Linfeng_20120130_CHD1_8.raw Medium NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.81 0.00 1 19 25 4 726.35822 2902.41103 0.15 47.62 5652 5652 MS2 37/144 Linfeng_091311_rIgG_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 548 2.81 0.00 0 15 100 2 579.30103 1157.59477 3.27 25.90 1675 1675 MS2 15/20 Linfeng_20120130_CHD1_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 442 2.80 0.00 0 3 100 2 579.30176 1157.59624 4.53 26.22 1910 1910 MS2 17/20 Linfeng_20120130_CHD1_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 358 2.80 0.00 1 18 25 2 926.46838 1851.92949 1.34 36.27 3578 3578 MS2 17/28 Linfeng_122411_rIgG_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 478 2.79 0.00 0 8 100 2 579.30194 1157.59661 4.85 26.59 1789 1789 MS2 14/20 Linfeng_20120130_CHD1_2.raw Medium HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 2.79 0.00 1 27 25 4 492.27151 1966.06423 1.92 35.24 3446 3446 MS2 30/96 Linfeng_122411_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 729 2.79 0.00 0 6 100 2 530.78680 1060.56633 2.80 31.01 2200 2200 MS2 15/16 Linfeng_20120130_CHD1_7.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 7 25 2 616.80463 1232.60198 3.31 18.58 1369 1369 MS2 20/30 Linfeng_122411_rIgG_1.raw Medium NHKEEmSQLTGQNSGDVNVEINVAPGK Unambiguous 1 1 IPI00019359.4 M6(Oxidation) CID 1.0000 0.0000 1 1 519 2.78 0.00 1 28 100 4 728.60376 2911.39321 2.76 30.08 2769 2769 MS2 37/156 Linfeng_20120130_CHD1_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 438 2.78 0.00 0 3 100 2 579.30188 1157.59648 4.74 26.13 1738 1738 MS2 16/20 Linfeng_20120130_CHD1_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 524 2.78 0.00 0 15 100 2 579.29901 1157.59075 -0.21 25.80 2026 2026 MS2 16/20 Linfeng_20120130_CHD1_8.raw Medium HGVQELEIELQSQLSKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 292 2.77 0.00 1 11 25 4 492.27161 1966.06460 2.10 35.08 3453 3453 MS2 30/96 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 445 2.77 0.00 0 4 67 2 579.30170 1157.59612 4.43 26.08 1890 1890 MS2 17/20 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 454 2.76 0.00 0 1 100 2 579.30078 1157.59429 2.85 26.05 2196 2196 MS2 17/20 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 444 2.76 0.00 0 3 41 2 579.30176 1157.59624 4.53 25.85 1862 1862 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NYSPYYNTIDDLKDQIVDLTVGNNK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 256 2.75 0.00 1 7 25 3 968.13940 2902.40366 -2.39 47.66 5817 5817 MS2 26/96 Linfeng_091311_rIgG_10.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 538 2.75 0.00 1 37 100 2 654.34473 1307.68218 3.42 35.62 3258 3258 MS2 14/18 Linfeng_20120130_CHD1_2.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 530 2.74 0.00 1 37 100 3 441.89697 1323.67636 2.83 26.43 1725 1725 MS2 18/36 Linfeng_20120130_CHD1_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 439 2.74 0.00 0 4 77 2 579.30164 1157.59599 4.32 26.18 1702 1702 MS2 17/20 Linfeng_20120130_CHD1_3.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 261 2.74 0.00 0 3 7 2 793.88580 1586.76433 -0.88 4.05 462 462 MS2 15/26 Linfeng_122411_rIgG_5.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 607 2.73 0.00 1 3 59 3 617.98297 1851.93436 3.97 48.10 5414 5414 MS2 30/56 Linfeng_20120130_CHD1_9.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 553 2.73 0.00 1 14 100 3 623.31342 1867.92569 2.02 35.60 4102 4102 MS2 20/56 Linfeng_20120130_CHD1_5.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 593 2.73 0.00 1 9 100 2 926.47015 1851.93303 3.26 48.12 6629 6629 MS2 20/28 Linfeng_20120130_CHD1_10.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 609 2.73 0.00 1 3 44 3 617.98303 1851.93454 4.07 48.08 6620 6620 MS2 28/56 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 444 2.73 0.00 0 7 100 2 579.30170 1157.59612 4.43 26.76 1759 1759 MS2 16/20 Linfeng_20120130_CHD1_3.raw High IQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 252 2.73 0.00 1 23 25 3 365.85196 1095.54132 -5.15 22.37 2124 2124 MS2 20/28 Linfeng_091311_rIgG_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 627 2.72 0.00 1 4 65 3 617.98199 1851.93143 2.39 48.13 5622 5622 MS2 27/56 Linfeng_20120130_CHD1_3.raw Medium VQALEEANNDLENKIQDWYDKK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 498 2.72 0.00 2 5 71 4 666.58075 2663.30117 2.37 48.09 6471 6471 MS2 34/126 Linfeng_20120130_CHD1_1.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 585 2.72 0.00 1 37 100 3 441.89728 1323.67728 3.52 21.03 1396 1396 MS2 20/36 Linfeng_20120130_CHD1_1.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 405 2.71 0.00 1 25 25 3 436.56491 1307.68018 1.90 26.69 2360 2360 MS2 21/36 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 370 2.71 0.00 1 1 25 2 926.46912 1851.93096 2.14 36.33 3611 3611 MS2 20/28 Linfeng_122411_rIgG_2.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 208 2.70 0.00 0 2 25 2 803.37756 1605.74785 2.93 32.63 3258 3258 MS2 19/24 Linfeng_122411_rIgG_4.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 473 2.70 0.00 1 23 100 2 934.46582 1867.92436 1.31 35.26 4023 4023 MS2 11/28 Linfeng_20120130_CHD1_5.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 552 2.70 0.00 0 13 100 2 579.30103 1157.59477 3.27 26.88 1772 1772 MS2 15/20 Linfeng_20120130_CHD1_3.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 26 2.70 0.00 0 23 25 3 597.91608 1791.73368 3.28 16.63 1309 1309 MS2 33/88 Linfeng_122411_rIgG_2.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 631 2.70 0.00 1 12 100 3 617.98279 1851.93381 3.68 48.14 4940 4940 MS2 25/56 Linfeng_20120130_CHD1_6.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 608 2.70 0.00 1 7 69 3 617.98193 1851.93125 2.29 47.55 6321 6321 MS2 28/56 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 737 2.69 0.00 0 6 100 2 530.78699 1060.56670 3.15 32.03 2301 2301 MS2 14/16 Linfeng_20120130_CHD1_7.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 361 2.69 0.00 0 12 100 2 803.37897 1605.75066 4.67 39.38 3737 3737 MS2 16/24 Linfeng_20120130_CHD1_9.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 392 2.68 0.00 1 18 25 3 436.56302 1307.67450 -2.45 28.77 3262 3262 MS2 22/36 Linfeng_091311_rIgG_4.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 530 2.68 0.00 1 34 100 3 441.89706 1323.67664 3.04 21.47 1351 1351 MS2 20/36 Linfeng_20120130_CHD1_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 581 2.67 0.00 0 4 25 2 530.78644 1060.56560 2.11 28.79 2612 2612 MS2 15/16 Linfeng_122411_rIgG_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 551 2.66 0.00 0 5 100 2 579.30103 1157.59477 3.27 26.49 1776 1776 MS2 16/20 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 53 2.66 0.00 0 3 25 2 618.26544 1235.52361 -4.17 17.90 1832 1832 MS2 21/24 Linfeng_091311_rIgG_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 441 2.66 0.00 0 3 100 2 579.30176 1157.59624 4.53 26.20 1745 1745 MS2 17/20 Linfeng_20120130_CHD1_2.raw High KGPAAIQK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 165 2.65 0.00 1 8 100 2 406.75427 812.50127 2.90 12.26 1092 1092 MS2 12/14 Linfeng_20120130_CHD1_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 437 2.64 0.00 0 14 100 2 579.30054 1157.59380 2.42 25.92 1803 1803 MS2 15/20 Linfeng_20120130_CHD1_9.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 205 2.64 0.00 0 5 25 2 803.37750 1605.74773 2.85 32.72 3126 3126 MS2 19/24 Linfeng_122411_rIgG_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 324 2.63 0.00 0 19 25 2 616.80420 1232.60112 2.62 18.44 1394 1394 MS2 18/30 Linfeng_122411_rIgG_8.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 178 2.63 0.00 0 42 25 2 803.37378 1605.74028 -1.79 33.72 3914 3914 MS2 17/24 Linfeng_091311_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 714 2.63 0.00 0 5 100 2 530.78711 1060.56694 3.38 30.88 2807 2807 MS2 15/16 Linfeng_20120130_CHD1_4.raw High VQALEEANNDLENKIQDWYDK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 199 2.63 0.00 1 25 25 3 845.73578 2535.19278 -2.80 39.34 4615 4615 MS2 22/80 Linfeng_091311_rIgG_6.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 612 2.63 0.00 1 9 98 3 617.98242 1851.93271 3.08 48.13 6147 6147 MS2 27/56 Linfeng_20120130_CHD1_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 514 2.62 0.00 1 29 100 2 934.46796 1867.92864 3.60 36.27 3804 3804 MS2 16/28 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 448 2.62 0.00 0 13 100 2 579.30164 1157.59599 4.32 25.83 1702 1702 MS2 15/20 Linfeng_20120130_CHD1_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 467 2.62 0.00 0 19 100 2 579.30072 1157.59416 2.74 25.88 1858 1858 MS2 14/20 Linfeng_20120130_CHD1_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 471 2.62 0.00 0 4 100 2 579.30164 1157.59599 4.32 26.32 1923 1923 MS2 16/20 Linfeng_20120130_CHD1_1.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 538 2.61 0.00 1 31 100 2 654.34448 1307.68169 3.05 35.34 3588 3588 MS2 15/18 Linfeng_20120130_CHD1_1.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 531 2.61 0.00 1 47 100 3 441.89709 1323.67673 3.11 26.37 1763 1763 MS2 20/36 Linfeng_20120130_CHD1_2.raw High LASYLDKVQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 616 2.59 0.00 1 68 100 3 793.07013 2377.19583 3.19 46.54 6076 6076 MS2 26/80 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 594 2.59 0.00 0 5 25 2 530.78644 1060.56560 2.11 28.82 2647 2647 MS2 15/16 Linfeng_122411_rIgG_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 753 2.59 0.00 0 5 100 2 530.78729 1060.56731 3.72 31.85 3086 3086 MS2 15/16 Linfeng_20120130_CHD1_8.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 317 2.58 0.00 0 6 25 2 579.30054 1157.59380 2.42 23.76 1951 1951 MS2 17/20 Linfeng_122411_rIgG_3.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 102 2.57 0.00 0 16 100 2 618.27032 1235.53337 3.73 15.10 1307 1307 MS2 17/24 Linfeng_20120130_CHD1_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 688 2.56 0.00 0 5 45 2 530.78784 1060.56841 4.76 31.60 2813 2813 MS2 15/16 Linfeng_20120130_CHD1_1.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 511 2.56 0.00 1 14 100 2 654.34412 1307.68096 2.49 36.06 4035 4035 MS2 14/18 Linfeng_20120130_CHD1_8.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 488 2.56 0.00 1 31 100 2 934.46765 1867.92803 3.27 36.43 3437 3437 MS2 15/28 Linfeng_20120130_CHD1_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 471 2.55 0.00 0 3 100 2 579.30090 1157.59453 3.06 25.82 2157 2157 MS2 16/20 Linfeng_20120130_CHD1_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 115 2.55 0.00 0 13 100 2 618.26990 1235.53252 3.04 14.08 1243 1243 MS2 16/24 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 310 2.55 0.00 0 9 25 2 579.30042 1157.59355 2.21 23.34 1929 1929 MS2 17/20 Linfeng_122411_rIgG_2.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 568 2.55 0.00 1 35 100 3 441.89774 1323.67865 4.56 25.96 1878 1878 MS2 19/36 Linfeng_20120130_CHD1_1.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 502 2.54 0.00 1 10 100 2 934.46820 1867.92912 3.86 36.31 4180 4180 MS2 14/28 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 520 2.54 0.00 0 15 100 2 579.30096 1157.59465 3.16 25.92 1739 1739 MS2 15/20 Linfeng_20120130_CHD1_7.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 543 2.54 0.00 1 20 100 3 623.31384 1867.92698 2.71 35.47 3622 3622 MS2 19/56 Linfeng_20120130_CHD1_1.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 561 2.53 0.00 1 37 100 3 623.31390 1867.92716 2.81 35.73 3285 3285 MS2 21/56 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 58 2.53 0.00 0 23 25 2 618.26563 1235.52397 -3.88 18.05 1736 1736 MS2 20/24 Linfeng_091311_rIgG_9.raw High HGVQELEIELQSQLSK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 368 2.53 0.00 0 34 25 3 613.32489 1837.96012 -2.92 39.22 4620 4620 MS2 23/60 Linfeng_091311_rIgG_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 524 2.52 0.00 0 3 56 2 579.30121 1157.59514 3.58 26.25 1708 1708 MS2 17/20 Linfeng_20120130_CHD1_3.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 304 2.52 0.00 0 24 25 2 616.80493 1232.60259 3.81 18.38 1386 1386 MS2 17/30 Linfeng_122411_rIgG_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 562 2.49 0.00 0 9 25 2 530.78369 1060.56011 -3.07 31.00 3534 3534 MS2 15/16 Linfeng_091311_rIgG_7.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 580 2.48 0.00 0 22 100 2 595.81036 1190.61345 4.06 30.59 2348 2348 MS2 13/18 Linfeng_20120130_CHD1_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 464 2.48 0.00 1 17 100 2 934.46747 1867.92766 3.07 35.72 3159 3159 MS2 10/28 Linfeng_20120130_CHD1_3.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 352 2.48 0.00 0 18 100 2 803.37927 1605.75127 5.05 39.29 4734 4734 MS2 14/24 Linfeng_20120130_CHD1_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 603 2.48 0.00 0 6 25 2 530.78357 1060.55986 -3.30 30.80 3641 3641 MS2 15/16 Linfeng_091311_rIgG_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.47 0.00 0 3 21 2 530.78595 1060.56462 1.19 29.02 2787 2787 MS2 15/16 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 625 2.47 0.00 0 37 25 2 530.78589 1060.56450 1.07 27.69 2329 2329 MS2 15/16 Linfeng_122411_rIgG_10.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 170 2.46 0.00 0 15 25 2 533.25177 1065.49626 -2.93 20.20 2122 2122 MS2 14/16 Linfeng_091311_rIgG_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 57 2.45 0.00 0 13 25 2 618.26501 1235.52275 -4.86 17.94 1801 1801 MS2 20/24 Linfeng_091311_rIgG_8.raw High GGSGGSYGGGGSGGGYGGGSGSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 24 2.45 0.00 0 0 25 2 896.37115 1791.73503 4.04 16.29 1235 1235 MS2 20/44 Linfeng_122411_rIgG_10.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 530 2.45 0.00 0 15 100 2 595.81024 1190.61321 3.86 31.21 2425 2425 MS2 10/18 Linfeng_20120130_CHD1_9.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 531 2.45 0.00 0 25 100 2 595.81079 1190.61431 4.78 31.74 2535 2535 MS2 11/18 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 59 2.45 0.00 0 33 25 2 618.26654 1235.52580 -2.39 18.00 1751 1751 MS2 19/24 Linfeng_091311_rIgG_7.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 194 2.45 0.00 0 6 25 2 533.25220 1065.49712 -2.12 20.07 2058 2058 MS2 15/16 Linfeng_091311_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 560 2.44 0.00 0 3 18 2 530.78394 1060.56059 -2.61 30.65 3521 3521 MS2 15/16 Linfeng_091311_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 600 2.44 0.00 0 26 25 2 530.78357 1060.55986 -3.30 30.71 3568 3568 MS2 15/16 Linfeng_091311_rIgG_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 543 2.44 0.00 0 16 100 2 595.81055 1190.61382 4.37 30.99 2689 2689 MS2 11/18 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 745 2.43 0.00 0 8 100 2 530.78705 1060.56682 3.26 29.57 2439 2439 MS2 14/16 Linfeng_20120130_CHD1_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 118 2.43 0.00 0 10 100 2 618.27002 1235.53276 3.24 14.99 1010 1010 MS2 16/24 Linfeng_20120130_CHD1_5.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 573 2.43 0.00 0 19 100 2 595.81042 1190.61357 4.17 31.35 2759 2759 MS2 11/18 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.43 0.00 0 4 3 2 579.29816 1157.58904 -1.69 4.62 556 556 MS2 17/20 Linfeng_122411_rIgG_5.raw High SGGGGGGGLGSGGSIR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 290 2.43 0.00 0 12 25 2 616.80115 1232.59502 -2.33 23.23 2498 2498 MS2 21/30 Linfeng_091311_rIgG_4.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 535 2.43 0.00 0 15 100 2 595.81049 1190.61370 4.27 31.69 2529 2529 MS2 11/18 Linfeng_20120130_CHD1_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 509 2.43 0.00 0 24 25 2 530.78516 1060.56304 -0.31 28.52 2830 2830 MS2 15/16 Linfeng_122411_rIgG_5.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 570 2.43 0.00 0 10 100 2 595.81042 1190.61357 4.17 31.36 2476 2476 MS2 14/18 Linfeng_20120130_CHD1_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 615 2.42 0.00 0 33 25 2 530.78656 1060.56584 2.34 27.57 2234 2234 MS2 14/16 Linfeng_122411_rIgG_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 718 2.42 0.00 0 3 65 2 530.78766 1060.56804 4.41 30.96 2282 2282 MS2 15/16 Linfeng_20120130_CHD1_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 651 2.42 0.00 0 3 100 2 530.78760 1060.56792 4.30 31.99 2443 2443 MS2 15/16 Linfeng_20120130_CHD1_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 532 2.42 0.00 0 6 14 2 530.78406 1060.56084 -2.38 30.69 3520 3520 MS2 15/16 Linfeng_091311_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 685 2.42 0.00 0 4 100 2 530.78784 1060.56841 4.76 31.89 2561 2561 MS2 15/16 Linfeng_20120130_CHD1_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 498 2.41 0.00 1 13 100 2 934.46820 1867.92912 3.86 35.54 4014 4014 MS2 12/28 Linfeng_20120130_CHD1_10.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 724 2.41 0.00 0 8 100 2 530.78625 1060.56523 1.76 31.91 3201 3201 MS2 15/16 Linfeng_20120130_CHD1_10.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 191 2.40 0.00 0 11 25 2 533.25201 1065.49675 -2.47 2.75 366 366 MS2 15/16 Linfeng_091311_rIgG_1.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 193 2.40 0.00 0 28 25 2 533.25220 1065.49712 -2.12 20.02 2061 2061 MS2 15/16 Linfeng_091311_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 511 2.40 0.00 0 4 5 2 530.78552 1060.56377 0.38 29.56 2915 2915 MS2 15/16 Linfeng_122411_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 568 2.40 0.00 0 16 25 2 530.78351 1060.55974 -3.41 30.89 3579 3579 MS2 15/16 Linfeng_091311_rIgG_8.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 515 2.39 0.00 0 9 100 2 595.81061 1190.61394 4.47 31.03 2415 2415 MS2 13/18 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 63 2.38 0.00 0 4 25 2 618.26648 1235.52568 -2.49 17.75 1740 1740 MS2 22/24 Linfeng_091311_rIgG_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 289 2.38 0.00 0 3 8 2 579.29694 1157.58660 -3.80 27.98 3188 3188 MS2 17/20 Linfeng_091311_rIgG_8.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 721 2.38 0.00 0 6 100 2 530.78717 1060.56706 3.49 31.90 3011 3011 MS2 13/16 Linfeng_20120130_CHD1_4.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 309 2.38 0.00 0 5 25 2 579.30017 1157.59307 1.79 26.43 2499 2499 MS2 17/20 Linfeng_122411_rIgG_6.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 189 2.37 0.00 0 11 25 2 533.25226 1065.49724 -2.01 20.37 2083 2083 MS2 15/16 Linfeng_091311_rIgG_7.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 342 2.37 0.00 0 8 25 2 579.30060 1157.59392 2.53 22.33 1822 1822 MS2 17/20 Linfeng_122411_rIgG_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 504 2.37 0.00 0 9 11 2 530.78558 1060.56389 0.50 3.44 326 326 MS2 14/16 Linfeng_122411_rIgG_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 545 2.36 0.00 0 5 15 2 530.78412 1060.56096 -2.26 30.90 3534 3534 MS2 15/16 Linfeng_091311_rIgG_6.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 2.36 0.00 0 24 25 2 579.29749 1157.58769 -2.85 27.75 2855 2855 MS2 16/20 Linfeng_091311_rIgG_1.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 559 2.36 0.00 0 40 100 2 595.80957 1190.61186 2.73 30.37 2817 2817 MS2 11/18 Linfeng_20120130_CHD1_8.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 2.36 0.00 0 18 25 2 491.72269 982.43810 4.41 2.97 256 256 MS2 20/22 Linfeng_122411_rIgG_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 743 2.36 0.00 0 25 100 2 530.78650 1060.56572 2.23 31.97 3199 3199 MS2 15/16 Linfeng_20120130_CHD1_5.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 532 2.35 0.00 1 45 100 2 934.46790 1867.92851 3.53 35.64 3661 3661 MS2 12/28 Linfeng_20120130_CHD1_1.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 359 2.35 0.00 0 30 100 2 803.37909 1605.75090 4.83 39.39 3876 3876 MS2 17/24 Linfeng_20120130_CHD1_3.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 200 2.35 0.00 0 6 25 2 533.25244 1065.49761 -1.67 20.39 2115 2115 MS2 15/16 Linfeng_091311_rIgG_6.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 8 100 2 595.81067 1190.61406 4.58 30.96 2403 2403 MS2 12/18 Linfeng_20120130_CHD1_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 545 2.34 0.00 0 39 100 2 595.80927 1190.61125 2.22 30.69 2347 2347 MS2 11/18 Linfeng_20120130_CHD1_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 654 2.34 0.00 0 3 100 2 530.78754 1060.56780 4.18 32.01 2541 2541 MS2 15/16 Linfeng_20120130_CHD1_9.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 335 2.34 0.00 0 53 25 2 579.30029 1157.59331 2.00 24.95 2244 2244 MS2 16/20 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.34 0.00 0 4 7 2 530.78351 1060.55974 -3.41 30.81 3269 3269 MS2 15/16 Linfeng_091311_rIgG_1.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 202 2.34 0.00 0 9 100 2 491.72144 982.43559 1.87 2.98 175 175 MS2 15/22 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 630 2.33 0.00 0 6 77 2 530.78735 1060.56743 3.84 30.99 2391 2391 MS2 15/16 Linfeng_20120130_CHD1_9.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 600 2.33 0.00 0 14 100 2 595.80994 1190.61260 3.35 30.78 2376 2376 MS2 14/18 Linfeng_20120130_CHD1_2.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 172 2.32 0.00 0 55 25 2 533.25189 1065.49651 -2.70 20.02 2087 2087 MS2 15/16 Linfeng_091311_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 323 2.32 0.00 0 14 22 2 579.29791 1157.58855 -2.11 27.89 3081 3081 MS2 16/20 Linfeng_091311_rIgG_5.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 531 2.31 0.00 1 52 100 2 934.46820 1867.92912 3.86 35.88 3202 3202 MS2 15/28 Linfeng_20120130_CHD1_9.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 351 2.31 0.00 0 40 100 2 803.37720 1605.74712 2.47 39.15 4912 4912 MS2 16/24 Linfeng_20120130_CHD1_5.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 498 2.31 0.00 0 12 100 2 595.81067 1190.61406 4.58 30.89 2393 2393 MS2 13/18 Linfeng_20120130_CHD1_2.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 610 2.31 0.00 0 16 25 2 530.78571 1060.56413 0.73 28.43 2506 2506 MS2 15/16 Linfeng_122411_rIgG_8.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 2.30 0.00 0 38 100 2 803.37799 1605.74870 3.46 39.04 4400 4400 MS2 16/24 Linfeng_20120130_CHD1_1.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 74 2.30 0.00 0 24 25 2 618.26752 1235.52776 -0.81 17.96 1723 1723 MS2 20/24 Linfeng_091311_rIgG_5.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 514 2.30 0.00 0 12 100 2 595.81079 1190.61431 4.78 31.14 2719 2719 MS2 15/18 Linfeng_20120130_CHD1_1.raw High TLNDMRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 616 2.30 0.00 1 40 100 2 926.46857 1851.92986 1.54 47.60 6569 6569 MS2 15/28 Linfeng_20120130_CHD1_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 64 2.30 0.00 0 19 25 2 618.27032 1235.53337 3.73 16.89 1375 1375 MS2 15/24 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 676 2.30 0.00 0 4 54 2 530.78778 1060.56828 4.64 30.89 2392 2392 MS2 14/16 Linfeng_20120130_CHD1_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 536 2.30 0.00 0 10 100 2 595.80927 1190.61125 2.22 31.03 3007 3007 MS2 15/18 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 307 2.29 0.00 0 9 22 2 579.29712 1157.58696 -3.48 27.95 3140 3140 MS2 17/20 Linfeng_091311_rIgG_6.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 92 2.29 0.00 0 2 25 2 491.72025 982.43321 -0.56 4.82 446 446 MS2 20/22 Linfeng_091311_rIgG_2.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 527 2.29 0.00 0 21 100 2 595.81079 1190.61431 4.78 31.36 2343 2343 MS2 11/18 Linfeng_20120130_CHD1_3.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 4 13 2 579.29803 1157.58879 -1.90 27.72 3118 3118 MS2 16/20 Linfeng_091311_rIgG_4.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 591 2.28 0.00 0 17 100 2 595.80975 1190.61223 3.04 30.50 2330 2330 MS2 11/18 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 71 2.28 0.00 0 0 25 2 618.26990 1235.53252 3.04 17.07 1375 1375 MS2 15/24 Linfeng_122411_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 754 2.28 0.00 0 25 100 2 530.78711 1060.56694 3.38 34.23 3348 3348 MS2 13/16 Linfeng_20120130_CHD1_1.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 291 2.27 0.00 0 5 10 2 579.29675 1157.58623 -4.11 27.74 3164 3164 MS2 17/20 Linfeng_091311_rIgG_2.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 92 2.27 0.00 0 6 25 2 491.72006 982.43285 -0.93 2.70 253 253 MS2 20/22 Linfeng_091311_rIgG_8.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 600 2.27 0.00 0 17 100 2 595.80994 1190.61260 3.35 31.70 2265 2265 MS2 11/18 Linfeng_20120130_CHD1_7.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 733 2.26 0.00 0 35 100 2 530.78680 1060.56633 2.80 29.87 2599 2599 MS2 14/16 Linfeng_20120130_CHD1_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 712 2.26 0.00 0 4 31 2 530.78674 1060.56621 2.69 30.94 2963 2963 MS2 15/16 Linfeng_20120130_CHD1_5.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 573 2.25 0.00 1 45 100 2 654.34521 1307.68315 4.17 35.50 3128 3128 MS2 14/18 Linfeng_20120130_CHD1_9.raw High VQALEEANNDLENK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 283 2.25 0.00 0 24 25 2 793.88959 1586.77190 3.89 17.52 1425 1425 MS2 18/26 Linfeng_122411_rIgG_4.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 508 2.25 0.00 1 43 100 2 934.46680 1867.92632 2.36 36.11 2901 2901 MS2 12/28 Linfeng_20120130_CHD1_7.raw High MTLDDFR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 214 2.25 0.00 0 35 100 2 449.21191 897.41655 3.37 33.39 3534 3534 MS2 11/12 Linfeng_20120130_CHD1_10.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 586 2.25 0.00 0 6 100 2 595.81000 1190.61272 3.45 31.37 2999 2999 MS2 14/18 Linfeng_20120130_CHD1_8.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 520 2.25 0.00 0 15 100 2 595.81079 1190.61431 4.78 31.20 2729 2729 MS2 12/18 Linfeng_20120130_CHD1_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 754 2.24 0.00 0 24 100 2 530.78717 1060.56706 3.49 1.23 195 195 MS2 14/16 Linfeng_20120130_CHD1_6.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 155 2.24 0.00 0 24 25 2 533.25104 1065.49480 -4.30 20.29 2056 2056 MS2 15/16 Linfeng_091311_rIgG_9.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 672 2.24 0.00 0 9 100 2 530.78680 1060.56633 2.80 30.94 2219 2219 MS2 12/16 Linfeng_20120130_CHD1_6.raw High MTLDDFR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 195 2.24 0.00 0 50 100 2 449.21094 897.41460 1.19 33.47 3585 3585 MS2 11/12 Linfeng_20120130_CHD1_5.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 525 2.24 0.00 0 14 11 2 530.78381 1060.56035 -2.84 30.88 3480 3480 MS2 15/16 Linfeng_091311_rIgG_5.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 91 2.23 0.00 0 0 25 2 491.72040 982.43352 -0.25 6.29 524 524 MS2 19/22 Linfeng_091311_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 549 2.23 0.00 0 3 13 2 530.78387 1060.56047 -2.72 30.93 3520 3520 MS2 15/16 Linfeng_091311_rIgG_9.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 67 2.22 0.00 0 36 25 2 618.27063 1235.53398 4.23 17.08 1346 1346 MS2 15/24 Linfeng_122411_rIgG_2.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 494 2.21 0.00 1 21 100 2 934.46741 1867.92754 3.01 35.50 3629 3629 MS2 13/28 Linfeng_20120130_CHD1_1.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 93 2.20 0.00 0 2 25 2 491.72043 982.43358 -0.18 7.30 595 595 MS2 20/22 Linfeng_091311_rIgG_6.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 716 2.20 0.00 0 33 100 2 530.78790 1060.56853 4.87 1.39 217 217 MS2 11/16 Linfeng_20120130_CHD1_10.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 542 2.20 0.00 0 8 100 2 595.81073 1190.61418 4.68 31.26 2457 2457 MS2 12/18 Linfeng_20120130_CHD1_2.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 516 2.20 0.00 1 50 100 2 654.34418 1307.68108 2.58 35.06 3805 3805 MS2 12/18 Linfeng_20120130_CHD1_8.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 548 2.20 0.00 1 0 100 2 662.34229 1323.67729 3.53 21.54 1356 1356 MS2 12/18 Linfeng_20120130_CHD1_3.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 533 2.19 0.00 0 16 100 2 595.81055 1190.61382 4.37 31.62 2518 2518 MS2 10/18 Linfeng_20120130_CHD1_2.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 516 2.17 0.00 1 35 100 2 654.34320 1307.67912 1.09 35.11 3917 3917 MS2 13/18 Linfeng_20120130_CHD1_10.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 572 2.16 0.00 0 19 100 2 595.81042 1190.61357 4.17 31.56 2374 2374 MS2 13/18 Linfeng_20120130_CHD1_3.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 98 2.16 0.00 0 0 25 2 491.72226 982.43724 3.54 2.87 253 253 MS2 20/22 Linfeng_122411_rIgG_2.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 301 2.16 0.00 0 24 25 2 579.29669 1157.58611 -4.22 27.79 3227 3227 MS2 15/20 Linfeng_091311_rIgG_10.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 71 2.15 0.00 0 18 25 2 618.26953 1235.53179 2.45 16.95 1402 1402 MS2 14/24 Linfeng_122411_rIgG_5.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 739 2.15 0.00 0 34 100 2 530.78687 1060.56645 2.92 29.97 2252 2252 MS2 14/16 Linfeng_20120130_CHD1_9.raw High STMQELNSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 192 2.12 0.00 0 55 25 2 533.25201 1065.49675 -2.47 3.09 415 415 MS2 15/16 Linfeng_091311_rIgG_1.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 509 2.12 0.00 0 8 100 2 595.81073 1190.61418 4.68 30.73 2369 2369 MS2 13/18 Linfeng_20120130_CHD1_2.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 109 2.11 0.00 0 4 3 2 491.72180 982.43633 2.61 3.08 301 301 MS2 19/22 Linfeng_122411_rIgG_4.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 759 2.10 0.00 0 32 69 2 530.78638 1060.56548 2.00 1.88 363 363 MS2 14/16 Linfeng_20120130_CHD1_8.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 59 2.10 0.00 0 11 25 2 618.26636 1235.52544 -2.69 17.59 1706 1706 MS2 16/24 Linfeng_091311_rIgG_4.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 599 2.10 0.00 0 36 100 2 595.80975 1190.61223 3.04 30.29 2866 2866 MS2 10/18 Linfeng_20120130_CHD1_10.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 325 2.10 0.00 0 30 25 2 579.30054 1157.59380 2.42 22.75 1835 1835 MS2 15/20 Linfeng_122411_rIgG_3.raw High TLNDmRQEYEQLIAK Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 482 2.09 0.00 1 5 100 2 934.46777 1867.92827 3.40 35.59 3932 3932 MS2 12/28 Linfeng_20120130_CHD1_8.raw High IKFEmEQNLR Unambiguous 1 1 IPI00019359.4 M5(Oxidation) CID 1.0000 0.0000 1 1 479 2.08 0.00 1 12 100 2 662.34198 1323.67668 3.07 21.10 1401 1401 MS2 13/18 Linfeng_20120130_CHD1_1.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 97 2.07 0.00 0 0 25 2 491.71970 982.43212 -1.68 0.76 73 73 MS2 21/22 Linfeng_091311_rIgG_1.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 742 2.07 0.00 0 32 100 2 530.78699 1060.56670 3.15 29.87 2796 2796 MS2 14/16 Linfeng_20120130_CHD1_10.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 521 2.06 0.00 0 35 100 2 595.81073 1190.61418 4.68 31.55 2803 2803 MS2 9/18 Linfeng_20120130_CHD1_1.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 369 2.06 0.00 0 14 100 2 803.37860 1605.74993 4.22 39.23 4032 4032 MS2 11/24 Linfeng_20120130_CHD1_2.raw High FSSSSGYGGGSSR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 72 2.05 0.00 0 9 25 2 618.26965 1235.53203 2.65 17.03 1255 1255 MS2 16/24 Linfeng_122411_rIgG_7.raw High QVLDNLTMEK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 561 2.05 0.00 0 14 100 2 595.81079 1190.61431 4.78 31.61 2383 2383 MS2 10/18 Linfeng_20120130_CHD1_3.raw High NYSPYYNTIDDLK Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 407 2.03 0.00 0 15 100 2 803.38074 1605.75420 6.88 39.87 4665 4665 MS2 8/24 Linfeng_20120130_CHD1_4.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 91 2.02 0.00 0 4 22 2 491.71997 982.43266 -1.12 2.66 235 235 MS2 19/22 Linfeng_091311_rIgG_3.raw High SLEDTKNR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 423 2.02 0.00 1 0 25 2 481.75070 962.49413 4.09 2.87 243 243 MS2 13/14 Linfeng_122411_rIgG_7.raw High IKFEMEQNLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 523 2.02 0.00 1 49 100 2 654.34412 1307.68096 2.49 35.73 2828 2828 MS2 13/18 Linfeng_20120130_CHD1_7.raw High QGVDADINGLR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 305 2.02 0.00 0 44 25 2 579.30078 1157.59429 2.85 15.24 1256 1256 MS2 12/20 Linfeng_122411_rIgG_5.raw High LASYLDK Unambiguous 22 5 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00019359.4 CID 1.0000 0.0000 1 1 244 2.01 0.00 0 28 100 2 405.22485 809.44243 2.54 21.37 1394 1394 MS2 10/12 Linfeng_20120130_CHD1_4.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 93 2.01 0.00 0 1 25 2 491.72046 982.43364 -0.12 8.31 667 667 MS2 18/22 Linfeng_091311_rIgG_6.raw High FSSSGGGGGGGR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 135 2.00 0.00 0 26 25 2 491.72278 982.43828 4.60 2.86 252 252 MS2 15/22 Linfeng_122411_rIgG_3.raw High TLLDIDNTR Unambiguous 1 1 IPI00019359.4 CID 1.0000 0.0000 1 1 691 2.00 0.00 0 4 24 2 530.78778 1060.56828 4.64 30.57 2616 2616 MS2 15/16 Linfeng_20120130_CHD1_1.raw IPI00220327.4 "Keratin, type II cytoskeletal 1" 65.06 1 43 48 1589 1344.93 61.34 39 424 1714.01 54.81 35 493 2412.61 60.25 36 672 644 66.0 8.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 7.37 0.00 0 0 25 3 1104.77783 3312.31894 3.23 21.10 1848 1848 MS2 42/152 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 7.29 0.00 0 0 25 3 1104.77747 3312.31784 2.90 21.28 1814 1814 MS2 39/152 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 7.12 0.00 0 1 11 3 1104.76770 3312.28855 -5.94 22.08 2337 2337 MS2 36/152 Linfeng_091311_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.89 0.00 0 1 25 3 1104.76843 3312.29074 -5.28 22.03 2337 2337 MS2 40/152 Linfeng_091311_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.80 0.00 0 2 25 3 1104.77930 3312.32334 4.56 21.15 1699 1699 MS2 37/152 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.79 0.00 0 1 25 3 795.32471 2383.95957 3.19 19.88 1705 1705 MS2 44/120 Linfeng_122411_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.76 0.00 0 3 7 3 795.32074 2383.94767 -1.81 2.57 340 340 MS2 45/120 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.76 0.00 0 1 25 3 795.32507 2383.96067 3.65 19.98 1525 1525 MS2 48/120 Linfeng_122411_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.73 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.70 2155 2155 MS2 46/120 Linfeng_091311_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.66 0.00 0 4 25 3 795.32117 2383.94895 -1.27 20.73 2151 2151 MS2 45/120 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.66 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.89 2258 2258 MS2 44/120 Linfeng_091311_rIgG_10.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.66 0.00 0 0 25 3 1104.76904 3312.29258 -4.73 22.15 2319 2319 MS2 39/152 Linfeng_091311_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 6.60 0.00 0 1 25 3 795.32397 2383.95737 2.26 19.96 1662 1662 MS2 46/120 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 6.59 0.00 0 1 25 3 795.32568 2383.96250 4.42 19.97 1506 1506 MS2 42/120 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 271 6.54 0.00 1 5 21 3 978.17932 2932.52341 2.38 39.38 3976 3976 MS2 38/92 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.53 0.00 0 0 25 3 795.32080 2383.94785 -1.73 20.94 2191 2191 MS2 45/120 Linfeng_091311_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 6.40 0.00 0 1 100 3 1104.77759 3312.31821 3.01 20.07 1326 1326 MS2 37/152 Linfeng_20120130_CHD1_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.40 0.00 0 1 12 3 795.32080 2383.94785 -1.73 20.65 2175 2175 MS2 46/120 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 6.39 0.00 1 13 25 3 978.17999 2932.52542 3.07 39.30 3986 3986 MS2 41/92 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.34 0.00 0 1 25 3 1104.77820 3312.32004 3.57 21.28 1646 1646 MS2 35/152 Linfeng_122411_rIgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.34 0.00 0 4 7 4 828.83362 3312.31264 1.33 3.84 401 401 MS2 63/228 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.29 0.00 0 0 15 3 795.31995 2383.94529 -2.80 20.91 2141 2141 MS2 47/120 Linfeng_091311_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 6.28 0.00 0 3 4 3 795.32294 2383.95426 0.96 3.64 370 370 MS2 46/120 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 6.27 0.00 0 3 25 3 1104.77173 3312.30063 -2.29 21.91 2064 2064 MS2 39/152 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.24 0.00 0 1 10 3 795.32007 2383.94565 -2.65 20.99 2232 2232 MS2 43/120 Linfeng_091311_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 6.22 0.00 0 1 17 3 795.32037 2383.94657 -2.27 20.94 2147 2147 MS2 47/120 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 268 6.07 0.00 1 15 25 3 978.18060 2932.52726 3.69 39.31 4101 4101 MS2 37/92 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 6.02 0.00 0 3 100 3 1104.77783 3312.31894 3.23 19.89 1355 1355 MS2 38/152 Linfeng_20120130_CHD1_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.94 0.00 0 0 25 3 795.32037 2383.94657 -2.27 21.00 2170 2170 MS2 46/120 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 5.94 0.00 2 3 11 3 834.42328 2501.25528 1.35 29.78 2742 2742 MS2 40/84 Linfeng_122411_rIgG_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 338 5.93 0.00 2 3 4 3 834.42261 2501.25327 0.54 29.82 2779 2779 MS2 39/84 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.85 0.00 0 0 25 2 1192.47681 2383.94634 -2.36 20.66 2177 2177 MS2 26/60 Linfeng_091311_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.84 0.00 0 0 25 2 1192.47607 2383.94487 -2.98 20.95 2148 2148 MS2 26/60 Linfeng_091311_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.82 0.00 0 14 25 2 1192.47546 2383.94365 -3.49 2.40 317 317 MS2 26/60 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 18 5.82 0.00 0 7 100 3 795.32483 2383.95993 3.34 16.94 1412 1412 MS2 37/120 Linfeng_20120130_CHD1_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 18 5.80 0.00 0 9 100 3 795.32507 2383.96067 3.65 16.87 1376 1376 MS2 40/120 Linfeng_20120130_CHD1_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 19 5.80 0.00 0 2 100 3 795.32538 2383.96158 4.03 16.83 1106 1106 MS2 31/120 Linfeng_20120130_CHD1_1.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.77 0.00 0 2 25 4 828.83636 3312.32363 4.65 21.16 1700 1700 MS2 63/228 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.77 0.00 0 0 25 3 795.32434 2383.95847 2.73 21.68 1752 1752 MS2 41/120 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 16 5.76 0.00 0 0 100 2 1192.48328 2383.95928 3.06 16.90 1379 1379 MS2 26/60 Linfeng_20120130_CHD1_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.72 0.00 0 1 19 2 1192.47729 2383.94731 -1.95 20.78 2157 2157 MS2 26/60 Linfeng_091311_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.72 0.00 0 3 25 3 795.32452 2383.95902 2.96 19.82 1460 1460 MS2 37/120 Linfeng_122411_rIgG_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.70 0.00 0 0 25 2 1192.47192 2383.93657 -6.46 20.94 1930 1930 MS2 26/60 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.68 0.00 0 1 25 3 795.32458 2383.95920 3.03 19.93 1458 1458 MS2 41/120 Linfeng_122411_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 561 5.65 0.00 2 4 100 3 834.42621 2501.26407 4.86 39.44 3746 3746 MS2 36/84 Linfeng_20120130_CHD1_9.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 17 5.65 0.00 0 0 100 2 1192.48352 2383.95976 3.27 16.88 1110 1110 MS2 26/60 Linfeng_20120130_CHD1_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.64 0.00 0 0 25 2 1192.47644 2383.94560 -2.67 20.96 2194 2194 MS2 26/60 Linfeng_091311_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.64 0.00 0 2 25 4 828.83563 3312.32070 3.76 21.11 1850 1850 MS2 56/228 Linfeng_122411_rIgG_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 4 5.63 0.00 0 4 25 2 1192.47729 2383.94731 -1.95 20.76 2164 2164 MS2 27/60 Linfeng_091311_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.62 0.00 0 6 25 2 1192.47607 2383.94487 -2.98 21.01 2234 2234 MS2 27/60 Linfeng_091311_rIgG_8.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 5.61 0.00 0 0 100 3 1104.77808 3312.31968 3.45 19.71 1303 1303 MS2 37/152 Linfeng_20120130_CHD1_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 9 5.60 0.00 0 12 25 3 795.32538 2383.96158 4.03 19.82 1627 1627 MS2 35/120 Linfeng_122411_rIgG_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.60 0.00 0 0 25 2 1192.48169 2383.95610 1.73 20.02 1669 1669 MS2 26/60 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 5.58 0.00 0 0 100 3 1104.77783 3312.31894 3.23 20.11 1329 1329 MS2 35/152 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 5.54 0.00 0 1 100 2 883.37360 1765.73992 2.89 30.12 2272 2272 MS2 28/38 Linfeng_20120130_CHD1_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.54 0.00 0 2 25 2 1192.48438 2383.96147 3.99 19.87 1634 1634 MS2 23/60 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 5.53 0.00 0 17 100 2 883.37396 1765.74065 3.30 29.31 2625 2625 MS2 24/38 Linfeng_20120130_CHD1_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 5.53 0.00 0 2 25 3 795.32520 2383.96103 3.80 20.00 1557 1557 MS2 39/120 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.52 0.00 0 1 25 2 1192.48279 2383.95830 2.65 19.96 1461 1461 MS2 24/60 Linfeng_122411_rIgG_7.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 5.52 0.00 2 4 25 3 834.42432 2501.25840 2.59 29.65 2870 2870 MS2 42/84 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 83 5.49 0.00 0 2 100 2 883.37469 1765.74211 4.13 30.76 2200 2200 MS2 23/38 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 5.49 0.00 1 10 25 3 978.17999 2932.52542 3.07 39.45 4166 4166 MS2 35/92 Linfeng_122411_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 5.46 0.00 0 0 25 2 1192.48315 2383.95903 2.96 19.92 1710 1710 MS2 24/60 Linfeng_122411_rIgG_5.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 5.45 0.00 2 8 25 3 728.71539 2184.13163 2.75 40.89 4171 4171 MS2 34/72 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 3 5.45 0.00 0 2 25 2 1192.47791 2383.94853 -1.44 20.86 2254 2254 MS2 27/60 Linfeng_091311_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 5.44 0.00 0 4 25 2 883.37445 1765.74162 3.86 27.49 2639 2639 MS2 28/38 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.43 0.00 0 0 25 3 1104.77722 3312.31711 2.68 21.46 1697 1697 MS2 34/152 Linfeng_122411_rIgG_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 5.42 0.00 0 2 25 4 828.83026 3312.29922 -2.72 21.75 2042 2042 MS2 54/228 Linfeng_091311_rIgG_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 5.40 0.00 2 5 2 3 728.71393 2184.12723 0.74 40.73 4509 4509 MS2 33/72 Linfeng_122411_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 5.37 0.00 0 4 100 2 883.37341 1765.73955 2.68 30.36 2831 2831 MS2 27/38 Linfeng_20120130_CHD1_5.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.35 0.00 0 8 25 3 795.32599 2383.96341 4.80 21.55 1816 1816 MS2 37/120 Linfeng_122411_rIgG_4.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 5.34 0.00 1 3 18 3 762.71454 2286.12906 1.82 31.97 3229 3229 MS2 37/76 Linfeng_122411_rIgG_6.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 5.31 0.00 1 3 19 3 762.71454 2286.12906 1.82 31.79 3036 3036 MS2 36/76 Linfeng_122411_rIgG_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 5.28 0.00 1 2 10 3 762.71497 2286.13034 2.38 31.67 2989 2989 MS2 36/76 Linfeng_122411_rIgG_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 18 5.27 0.00 0 8 100 3 795.32379 2383.95682 2.03 17.04 1145 1145 MS2 30/120 Linfeng_20120130_CHD1_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 79 5.25 0.00 0 9 100 2 883.37451 1765.74175 3.93 32.12 3061 3061 MS2 23/38 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 5.23 0.00 0 27 100 2 883.37354 1765.73979 2.82 30.86 2974 2974 MS2 27/38 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 5.23 0.00 2 5 15 3 728.71246 2184.12284 -1.27 41.43 4901 4901 MS2 36/72 Linfeng_091311_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 88 5.22 0.00 0 2 100 2 883.37494 1765.74260 4.41 30.05 2523 2523 MS2 27/38 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 5.21 0.00 0 4 100 2 883.37494 1765.74260 4.41 30.58 2919 2919 MS2 25/38 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 541 5.16 0.00 1 9 100 3 533.95154 1599.84006 3.94 42.49 5090 5090 MS2 30/52 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 5.14 0.00 0 11 100 2 883.37482 1765.74236 4.27 28.98 2342 2342 MS2 27/38 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 5.14 0.00 0 0 100 2 883.37360 1765.73992 2.89 29.30 2173 2173 MS2 25/38 Linfeng_20120130_CHD1_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 5.12 0.00 2 3 25 3 728.71539 2184.13163 2.75 40.89 3780 3780 MS2 36/72 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 5.12 0.00 2 3 25 3 728.71533 2184.13144 2.67 41.18 4138 4138 MS2 35/72 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 380 5.12 0.00 2 9 25 3 728.71570 2184.13254 3.17 40.95 4352 4352 MS2 34/72 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 76 5.11 0.00 0 3 100 2 883.37311 1765.73894 2.34 29.44 2077 2077 MS2 25/38 Linfeng_20120130_CHD1_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 5.11 0.00 0 3 100 2 883.37384 1765.74040 3.17 30.03 2632 2632 MS2 28/38 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 5.11 0.00 1 13 25 3 533.95013 1599.83585 1.31 33.71 3280 3280 MS2 30/52 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 5.10 0.00 2 3 25 3 728.71588 2184.13309 3.42 40.82 4179 4179 MS2 37/72 Linfeng_122411_rIgG_2.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 5.10 0.00 0 0 25 2 1192.48486 2383.96245 4.40 20.04 1463 1463 MS2 23/60 Linfeng_122411_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 79 5.10 0.00 0 0 100 2 883.37433 1765.74138 3.72 29.68 2218 2218 MS2 24/38 Linfeng_20120130_CHD1_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 5.09 0.00 0 3 100 2 883.37494 1765.74260 4.41 30.11 2165 2165 MS2 27/38 Linfeng_20120130_CHD1_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 5.08 0.00 2 6 22 3 728.71228 2184.12229 -1.52 41.62 4901 4901 MS2 35/72 Linfeng_091311_rIgG_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 11 5.08 0.00 0 0 25 3 795.32611 2383.96378 4.95 19.92 1583 1583 MS2 34/120 Linfeng_122411_rIgG_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 5.07 0.00 0 10 15 3 665.32898 1993.97239 -2.17 44.46 5242 5242 MS2 32/60 Linfeng_091311_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 86 5.07 0.00 0 7 100 2 883.37543 1765.74358 4.96 31.25 2325 2325 MS2 25/38 Linfeng_20120130_CHD1_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 5.06 0.00 0 2 100 2 883.37347 1765.73967 2.75 30.29 2815 2815 MS2 27/38 Linfeng_20120130_CHD1_5.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 5.05 0.00 1 2 25 3 762.71521 2286.13108 2.70 31.71 3139 3139 MS2 37/76 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 5.05 0.00 0 1 100 3 1104.77722 3312.31711 2.68 20.02 1251 1251 MS2 38/152 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 5.04 0.00 0 22 100 2 883.37402 1765.74077 3.37 28.95 2548 2548 MS2 23/38 Linfeng_20120130_CHD1_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 5.04 0.00 0 2 25 2 883.37329 1765.73931 2.54 26.02 2270 2270 MS2 27/38 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.04 0.00 0 1 25 4 828.83527 3312.31923 3.32 21.21 1778 1778 MS2 54/228 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 5.03 0.00 0 5 25 2 883.36975 1765.73223 -1.47 28.87 3264 3264 MS2 29/38 Linfeng_091311_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.03 0.00 0 0 25 3 1104.77771 3312.31858 3.12 21.27 1573 1573 MS2 38/152 Linfeng_122411_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 5.02 0.00 0 0 25 3 1104.77673 3312.31565 2.24 21.15 1771 1771 MS2 35/152 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 5.02 0.00 0 5 100 2 883.37268 1765.73808 1.85 30.93 2191 2191 MS2 23/38 Linfeng_20120130_CHD1_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 73 5.00 0.00 0 14 100 2 883.37378 1765.74028 3.10 31.21 3023 3023 MS2 24/38 Linfeng_20120130_CHD1_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 5.00 0.00 0 32 25 3 665.33301 1993.98447 3.89 43.52 4432 4432 MS2 33/60 Linfeng_122411_rIgG_8.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 4.99 0.00 0 3 25 3 795.32513 2383.96085 3.72 20.00 1460 1460 MS2 41/120 Linfeng_122411_rIgG_1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 338 4.98 0.00 1 21 25 3 762.71423 2286.12815 1.42 31.68 2865 2865 MS2 34/76 Linfeng_122411_rIgG_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 4.97 0.00 0 0 100 2 883.37366 1765.74004 2.96 30.90 2378 2378 MS2 26/38 Linfeng_20120130_CHD1_9.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 4.95 0.00 2 3 25 3 834.42426 2501.25821 2.52 29.78 2943 2943 MS2 40/84 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 4.94 0.00 0 1 100 2 883.37372 1765.74016 3.03 30.60 2888 2888 MS2 27/38 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.94 0.00 0 6 100 2 738.39978 1475.79228 4.72 28.89 2094 2094 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 4.93 0.00 0 28 100 2 883.37488 1765.74248 4.34 30.23 2181 2181 MS2 26/38 Linfeng_20120130_CHD1_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 4.91 0.00 0 5 100 2 883.37360 1765.73992 2.89 30.88 2213 2213 MS2 24/38 Linfeng_20120130_CHD1_6.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 6 4.89 0.00 0 26 25 3 795.32135 2383.94950 -1.04 19.04 1670 1670 MS2 31/120 Linfeng_091311_rIgG_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.89 0.00 0 29 21 3 795.31787 2383.93906 -5.42 20.93 1929 1929 MS2 40/120 Linfeng_091311_rIgG_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 386 4.89 0.00 0 29 20 3 665.33051 1993.97696 0.13 43.14 4837 4837 MS2 31/60 Linfeng_122411_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 4.88 0.00 0 30 100 2 883.37421 1765.74114 3.58 30.85 2906 2906 MS2 26/38 Linfeng_20120130_CHD1_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 86 4.86 0.00 0 0 100 2 883.37445 1765.74162 3.86 31.04 2841 2841 MS2 26/38 Linfeng_20120130_CHD1_4.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.85 0.00 0 5 25 2 1192.48254 2383.95781 2.45 19.97 1523 1523 MS2 22/60 Linfeng_122411_rIgG_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 528 4.84 0.00 0 12 100 2 858.93195 1716.85661 3.16 33.82 2915 2915 MS2 18/28 Linfeng_20120130_CHD1_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 4.84 0.00 2 4 25 2 1092.56958 2184.13188 2.87 41.02 4203 4203 MS2 27/36 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.84 0.00 0 2 100 2 883.37488 1765.74248 4.34 30.23 2290 2290 MS2 27/38 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.83 0.00 0 0 100 2 738.39917 1475.79106 3.89 28.99 2141 2141 MS2 20/22 Linfeng_20120130_CHD1_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 4.82 0.00 2 10 11 3 728.71130 2184.11936 -2.86 41.30 4951 4951 MS2 35/72 Linfeng_091311_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 92 4.81 0.00 0 6 100 2 883.37531 1765.74333 4.82 31.06 2704 2704 MS2 28/38 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.80 0.00 0 15 100 2 883.37494 1765.74260 4.41 28.89 2324 2324 MS2 24/38 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 4.79 0.00 2 7 25 4 546.78857 2184.13247 3.14 40.84 4181 4181 MS2 48/108 Linfeng_122411_rIgG_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.79 0.00 0 3 25 2 883.36902 1765.73076 -2.30 28.96 3258 3258 MS2 28/38 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 601 4.79 0.00 0 33 100 2 738.39844 1475.78960 2.90 28.08 2376 2376 MS2 20/22 Linfeng_20120130_CHD1_5.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 329 4.79 0.00 1 8 25 4 572.28735 2286.12758 1.17 31.71 2994 2994 MS2 50/114 Linfeng_122411_rIgG_3.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 4.79 0.00 1 14 25 3 762.71075 2286.11771 -3.15 32.83 3785 3785 MS2 31/76 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 598 4.78 0.00 0 35 100 2 738.39868 1475.79009 3.23 28.29 2292 2292 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 76 4.76 0.00 0 7 100 2 883.37408 1765.74089 3.44 28.96 2646 2646 MS2 24/38 Linfeng_20120130_CHD1_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 4.75 0.00 0 17 25 3 665.32892 1993.97220 -2.26 44.08 5233 5233 MS2 32/60 Linfeng_091311_rIgG_4.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 4.71 0.00 2 25 100 3 834.42474 2501.25968 3.10 39.13 3823 3823 MS2 30/84 Linfeng_20120130_CHD1_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.71 0.00 0 23 100 3 1104.77649 3312.31491 2.02 20.17 1376 1376 MS2 30/152 Linfeng_20120130_CHD1_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.71 0.00 0 1 25 2 883.36890 1765.73052 -2.43 28.93 3252 3252 MS2 28/38 Linfeng_091311_rIgG_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.71 0.00 0 1 25 3 1104.77808 3312.31968 3.45 21.26 1560 1560 MS2 36/152 Linfeng_122411_rIgG_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 4.71 0.00 0 12 25 3 665.33173 1993.98062 1.96 43.48 4507 4507 MS2 31/60 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 4.70 0.00 1 14 25 3 783.74707 2349.22666 3.47 51.33 5508 5508 MS2 32/80 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.70 0.00 0 1 25 2 883.37256 1765.73784 1.71 26.68 2475 2475 MS2 28/38 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 4.70 0.00 0 2 25 4 828.83557 3312.32046 3.69 21.29 1816 1816 MS2 50/228 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.68 0.00 0 3 100 2 883.37457 1765.74187 3.99 30.94 2386 2386 MS2 24/38 Linfeng_20120130_CHD1_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.68 0.00 0 28 100 2 883.37482 1765.74236 4.27 28.84 2317 2317 MS2 27/38 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 4.68 0.00 0 27 25 3 665.33276 1993.98374 3.52 43.20 4589 4589 MS2 31/60 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.67 0.00 0 2 100 3 1104.77783 3312.31894 3.23 19.86 1595 1595 MS2 30/152 Linfeng_20120130_CHD1_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 4.66 0.00 0 41 98 2 679.35541 1357.70354 5.66 38.41 4280 4280 MS2 20/22 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 4.66 0.00 0 14 25 3 665.33264 1993.98337 3.34 43.39 4504 4504 MS2 33/60 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 4.66 0.00 1 4 7 3 533.94794 1599.82926 -2.81 34.53 4003 4003 MS2 31/52 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 249 4.66 0.00 0 15 15 3 553.26813 1657.78983 -1.88 28.61 2588 2588 MS2 34/64 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 591 4.66 0.00 0 5 5 2 738.39948 1475.79167 4.30 26.83 2016 2016 MS2 20/22 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 517 4.65 0.00 1 11 100 2 800.42340 1599.83953 3.61 43.33 5341 5341 MS2 22/26 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 593 4.63 0.00 0 9 100 2 738.39960 1475.79192 4.47 27.87 1967 1967 MS2 20/22 Linfeng_20120130_CHD1_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 4.63 0.00 0 13 25 3 665.32910 1993.97275 -1.99 44.34 5239 5239 MS2 29/60 Linfeng_091311_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 613 4.63 0.00 1 3 100 3 533.94977 1599.83475 0.62 43.60 4591 4591 MS2 27/52 Linfeng_20120130_CHD1_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.62 0.00 0 7 25 2 883.37305 1765.73882 2.27 27.10 2416 2416 MS2 28/38 Linfeng_122411_rIgG_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.62 0.00 0 0 100 3 1104.77747 3312.31784 2.90 20.19 1262 1262 MS2 31/152 Linfeng_20120130_CHD1_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.62 0.00 0 0 100 3 1104.77771 3312.31858 3.12 20.37 1350 1350 MS2 34/152 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 4.61 0.00 2 14 25 3 728.71600 2184.13346 3.59 40.70 4275 4275 MS2 34/72 Linfeng_122411_rIgG_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 582 4.61 0.00 1 5 100 3 533.95038 1599.83658 1.77 43.14 4929 4929 MS2 31/52 Linfeng_20120130_CHD1_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 583 4.61 0.00 0 11 19 2 679.35449 1357.70171 4.31 38.58 4393 4393 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.61 0.00 0 2 25 2 883.36932 1765.73137 -1.95 28.66 3254 3254 MS2 29/38 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.61 0.00 0 34 100 2 738.39941 1475.79155 4.22 28.05 1994 1994 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.60 0.00 0 17 67 2 738.39886 1475.79045 3.48 28.66 2285 2285 MS2 20/22 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 4.60 0.00 0 5 25 2 883.37378 1765.74028 3.10 27.80 2623 2623 MS2 29/38 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 522 4.60 0.00 0 3 100 2 858.93372 1716.86016 5.23 33.58 3216 3216 MS2 21/28 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 83 4.60 0.00 0 5 100 2 883.37518 1765.74309 4.69 31.25 2454 2454 MS2 23/38 Linfeng_20120130_CHD1_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 4.59 0.00 1 4 3 3 533.94910 1599.83274 -0.63 33.51 3514 3514 MS2 31/52 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 590 4.59 0.00 0 14 100 2 738.39850 1475.78972 2.98 27.91 2344 2344 MS2 20/22 Linfeng_20120130_CHD1_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 4.59 0.00 1 3 11 3 533.94800 1599.82944 -2.69 34.40 4002 4002 MS2 31/52 Linfeng_091311_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 657 4.59 0.00 1 19 92 3 615.65588 1844.95310 3.77 31.32 2895 2895 MS2 26/60 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 74 4.59 0.00 0 17 100 2 883.37354 1765.73979 2.82 29.16 2130 2130 MS2 24/38 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.58 0.00 0 25 100 2 738.39893 1475.79057 3.56 28.05 2415 2415 MS2 20/22 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 543 4.58 0.00 1 13 100 3 533.95148 1599.83988 3.83 43.45 4558 4558 MS2 28/52 Linfeng_20120130_CHD1_3.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 572 4.57 0.00 1 0 100 2 922.97913 1844.95098 2.61 31.17 2867 2867 MS2 21/30 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 619 4.57 0.00 0 27 90 2 738.39832 1475.78935 2.73 28.92 2542 2542 MS2 20/22 Linfeng_20120130_CHD1_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 598 4.57 0.00 1 23 100 3 533.95074 1599.83768 2.46 43.51 5516 5516 MS2 28/52 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 598 4.57 0.00 0 45 100 2 738.39856 1475.78984 3.06 29.28 2699 2699 MS2 20/22 Linfeng_20120130_CHD1_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 4.57 0.00 1 73 25 3 762.71082 2286.11789 -3.07 32.56 3774 3774 MS2 29/76 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 523 4.56 0.00 0 40 100 2 858.93323 1716.85918 4.66 34.70 3442 3442 MS2 21/28 Linfeng_20120130_CHD1_1.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 4.56 0.00 0 3 25 3 795.32477 2383.95975 3.26 21.44 1835 1835 MS2 37/120 Linfeng_122411_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 4.56 0.00 1 25 25 3 533.94989 1599.83512 0.85 33.63 3386 3386 MS2 32/52 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 504 4.55 0.00 0 47 100 2 858.93274 1716.85820 4.09 35.07 3724 3724 MS2 17/28 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.55 0.00 0 10 25 2 883.36890 1765.73052 -2.43 4.78 565 565 MS2 27/38 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 4.55 0.00 0 5 4 3 572.95630 1716.85434 1.84 29.71 2763 2763 MS2 33/56 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.55 0.00 0 14 100 2 738.39905 1475.79082 3.73 25.90 1958 1958 MS2 20/22 Linfeng_20120130_CHD1_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.54 0.00 0 12 25 3 665.33258 1993.98319 3.25 43.44 4666 4666 MS2 30/60 Linfeng_122411_rIgG_6.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.54 0.00 0 7 25 2 883.37286 1765.73845 2.06 27.66 2245 2245 MS2 26/38 Linfeng_122411_rIgG_9.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 222 4.54 0.00 1 47 100 3 667.97003 2001.89554 3.11 31.21 2971 2971 MS2 30/60 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 614 4.53 0.00 0 15 68 2 738.39832 1475.78935 2.73 25.81 1847 1847 MS2 20/22 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 4.53 0.00 2 5 25 4 546.78827 2184.13125 2.58 40.88 4170 4170 MS2 49/108 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 4.53 0.00 2 11 25 4 546.78833 2184.13149 2.69 40.67 4272 4272 MS2 47/108 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 594 4.53 0.00 0 34 100 2 738.39960 1475.79192 4.47 28.26 2535 2535 MS2 20/22 Linfeng_20120130_CHD1_10.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 166 4.53 0.00 1 11 100 3 673.30121 2017.88907 2.40 25.34 1946 1946 MS2 29/60 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 576 4.53 0.00 1 20 100 3 533.95172 1599.84061 4.29 43.26 5326 5326 MS2 28/52 Linfeng_20120130_CHD1_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 4.52 0.00 0 11 25 3 665.32922 1993.97312 -1.80 44.06 5232 5232 MS2 31/60 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 495 4.52 0.00 0 5 100 2 858.93109 1716.85491 2.17 33.56 3608 3608 MS2 22/28 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.52 0.00 0 16 23 3 572.95630 1716.85434 1.84 28.43 2429 2429 MS2 29/56 Linfeng_122411_rIgG_10.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 7 4.51 0.00 0 0 25 2 1192.48291 2383.95854 2.76 19.90 1468 1468 MS2 24/60 Linfeng_122411_rIgG_9.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 4.51 0.00 1 3 25 3 533.95044 1599.83677 1.88 33.60 3238 3238 MS2 31/52 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.51 0.00 0 4 74 2 738.39935 1475.79143 4.14 27.84 2208 2208 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 585 4.50 0.00 0 35 100 2 738.39813 1475.78899 2.48 25.70 1828 1828 MS2 19/22 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 4.50 0.00 1 1 22 3 533.94739 1599.82761 -3.84 34.31 4044 4044 MS2 31/52 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 566 4.50 0.00 0 46 100 2 738.39978 1475.79228 4.72 28.33 2546 2546 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 592 4.48 0.00 0 28 100 2 738.39850 1475.78972 2.98 29.87 2597 2597 MS2 20/22 Linfeng_20120130_CHD1_4.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 4.48 0.00 1 5 25 4 572.28760 2286.12856 1.60 31.91 3051 3051 MS2 46/114 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 4.48 0.00 1 21 25 3 533.94855 1599.83109 -1.66 4.06 413 413 MS2 30/52 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 559 4.48 0.00 0 16 100 2 738.39941 1475.79155 4.22 25.85 1705 1705 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.47 0.00 0 36 100 2 738.39984 1475.79241 4.80 27.96 2178 2178 MS2 20/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 558 4.47 0.00 0 39 100 2 738.39886 1475.79045 3.48 29.47 2657 2657 MS2 19/22 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 4.47 0.00 1 0 25 2 1175.11768 2349.22807 4.08 51.40 5517 5517 MS2 21/40 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 555 4.45 0.00 0 46 100 2 738.39978 1475.79228 4.72 28.82 2011 2011 MS2 20/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 562 4.45 0.00 0 4 8 2 738.39978 1475.79228 4.72 26.64 1964 1964 MS2 20/22 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 535 4.45 0.00 0 3 100 2 858.93243 1716.85759 3.73 33.69 3597 3597 MS2 19/28 Linfeng_20120130_CHD1_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 4.44 0.00 0 3 1 3 572.95624 1716.85416 1.74 3.09 274 274 MS2 33/56 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.44 0.00 0 2 17 2 738.39972 1475.79216 4.64 26.86 1820 1820 MS2 20/22 Linfeng_20120130_CHD1_2.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 531 4.44 0.00 1 13 100 3 762.71661 2286.13529 4.54 39.44 3747 3747 MS2 31/76 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.44 0.00 0 3 28 2 738.39954 1475.79180 4.39 26.97 1896 1896 MS2 20/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 4.44 0.00 0 32 100 2 738.39880 1475.79033 3.39 28.26 2056 2056 MS2 20/22 Linfeng_20120130_CHD1_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 4.43 0.00 2 1 2 4 546.78705 2184.12636 0.34 40.74 4510 4510 MS2 45/108 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.43 0.00 0 1 100 3 1104.77795 3312.31931 3.34 20.29 1269 1269 MS2 32/152 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.43 0.00 0 4 25 2 883.37164 1765.73601 0.68 25.14 2371 2371 MS2 28/38 Linfeng_122411_rIgG_5.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.43 0.00 0 0 100 3 1104.77844 3312.32077 3.79 19.69 1556 1556 MS2 33/152 Linfeng_20120130_CHD1_8.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 155 4.43 0.00 1 3 8 3 563.32898 1687.97239 1.30 31.57 2976 2976 MS2 32/64 Linfeng_122411_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 4.41 0.00 0 40 100 2 829.40295 1657.79863 3.43 32.27 3169 3169 MS2 20/32 Linfeng_20120130_CHD1_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 4.41 0.00 0 6 25 2 883.37311 1765.73894 2.34 27.13 2393 2393 MS2 26/38 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 601 4.40 0.00 0 3 68 2 738.39868 1475.79009 3.23 26.87 1856 1856 MS2 20/22 Linfeng_20120130_CHD1_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 581 4.40 0.00 0 17 100 2 679.35272 1357.69817 1.71 37.43 4518 4518 MS2 20/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.39 0.00 0 3 13 2 738.39978 1475.79228 4.72 26.86 2319 2319 MS2 20/22 Linfeng_20120130_CHD1_10.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 157 4.39 0.00 1 5 25 3 563.32910 1687.97275 1.52 31.75 3201 3201 MS2 32/64 Linfeng_122411_rIgG_6.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 4.39 0.00 1 35 25 3 762.71539 2286.13163 2.94 31.66 2769 2769 MS2 30/76 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 4.38 0.00 0 4 6 2 738.39893 1475.79057 3.56 26.90 2133 2133 MS2 20/22 Linfeng_20120130_CHD1_5.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 144 4.37 0.00 1 4 100 3 673.29950 2017.88395 -0.14 25.84 2037 2037 MS2 33/60 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 4.37 0.00 0 38 100 2 829.40479 1657.80229 5.64 32.49 2528 2528 MS2 21/32 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 593 4.36 0.00 0 3 43 2 738.39966 1475.79204 4.55 27.00 1820 1820 MS2 20/22 Linfeng_20120130_CHD1_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 563 4.36 0.00 1 5 91 3 533.94904 1599.83255 -0.75 43.41 4997 4997 MS2 30/52 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.35 0.00 0 8 25 2 883.36920 1765.73113 -2.09 28.89 3215 3215 MS2 27/38 Linfeng_091311_rIgG_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 4.35 0.00 1 4 10 3 533.94769 1599.82853 -3.27 34.42 3751 3751 MS2 30/52 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 580 4.34 0.00 0 6 100 2 679.35425 1357.70122 3.95 38.20 4442 4442 MS2 20/22 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 4.34 0.00 0 32 25 3 553.26978 1657.79477 1.10 28.60 2618 2618 MS2 37/64 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 486 4.34 0.00 0 2 100 2 858.93188 1716.85649 3.09 34.71 3645 3645 MS2 20/28 Linfeng_20120130_CHD1_4.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 4.34 0.00 1 16 25 2 971.49963 1941.99199 2.20 41.03 3797 3797 MS2 25/32 Linfeng_122411_rIgG_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 603 4.34 0.00 1 6 100 3 533.94952 1599.83402 0.17 43.28 4963 4963 MS2 27/52 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 4.33 0.00 0 16 25 2 883.37372 1765.74016 3.03 28.49 2603 2603 MS2 27/38 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 251 4.33 0.00 0 10 25 3 553.26764 1657.78836 -2.76 29.10 2521 2521 MS2 34/64 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.32 0.00 0 51 100 2 738.39899 1475.79070 3.64 29.38 2716 2716 MS2 20/22 Linfeng_20120130_CHD1_10.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 4.32 0.00 1 25 10 3 615.65283 1844.94394 -1.20 4.13 448 448 MS2 30/60 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.32 0.00 0 12 100 2 738.39929 1475.79131 4.06 27.87 2475 2475 MS2 20/22 Linfeng_20120130_CHD1_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 580 4.32 0.00 0 10 100 3 572.95642 1716.85471 2.06 34.06 3580 3580 MS2 30/56 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 4.31 0.00 0 29 25 3 553.26965 1657.79441 0.88 28.71 2746 2746 MS2 32/64 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 4.30 0.00 0 18 25 3 589.25122 1765.73911 2.43 26.11 2282 2282 MS2 44/76 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 4.29 0.00 0 17 100 2 829.39490 1657.78252 -6.29 32.59 3358 3358 MS2 23/32 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 520 4.29 0.00 0 9 100 2 858.93060 1716.85393 1.60 34.79 3840 3840 MS2 15/28 Linfeng_20120130_CHD1_10.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 186 4.28 0.00 1 10 100 3 673.30231 2017.89237 4.03 25.28 1788 1788 MS2 28/60 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 4.28 0.00 2 4 25 4 546.78809 2184.13051 2.24 40.90 3781 3781 MS2 48/108 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 270 4.28 0.00 1 4 14 4 733.88654 2932.52431 2.69 39.37 3975 3975 MS2 41/138 Linfeng_122411_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 501 4.28 0.00 1 9 100 2 800.42377 1599.84026 4.07 42.36 5061 5061 MS2 22/26 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 576 4.28 0.00 0 4 14 2 738.39905 1475.79082 3.73 26.85 2233 2233 MS2 20/22 Linfeng_20120130_CHD1_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 492 4.27 0.00 0 14 100 2 858.93262 1716.85796 3.95 34.61 3422 3422 MS2 20/28 Linfeng_20120130_CHD1_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.27 0.00 0 18 25 3 589.25116 1765.73893 2.33 26.17 2264 2264 MS2 42/76 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.27 0.00 0 0 25 2 883.37372 1765.74016 3.03 28.55 2245 2245 MS2 23/38 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.27 0.00 0 1 25 2 883.36920 1765.73113 -2.09 28.66 3247 3247 MS2 29/38 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.26 0.00 0 2 25 2 883.36847 1765.72966 -2.92 28.79 2997 2997 MS2 28/38 Linfeng_091311_rIgG_1.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 592 4.26 0.00 2 10 100 3 834.42450 2501.25895 2.81 39.09 3693 3693 MS2 33/84 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 4.25 0.00 0 34 100 2 738.39880 1475.79033 3.39 29.32 2177 2177 MS2 20/22 Linfeng_20120130_CHD1_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.25 0.00 0 3 25 2 883.37189 1765.73650 0.95 27.63 2321 2321 MS2 28/38 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 569 4.25 0.00 0 7 100 2 738.39874 1475.79021 3.31 25.99 1745 1745 MS2 17/22 Linfeng_20120130_CHD1_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 449 4.25 0.00 1 13 25 3 615.65143 1844.93973 -3.48 27.31 3053 3053 MS2 32/60 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 380 4.25 0.00 0 43 25 3 572.95679 1716.85581 2.69 29.55 2856 2856 MS2 29/56 Linfeng_122411_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 4.24 0.00 0 0 100 2 829.40100 1657.79473 1.08 33.19 3382 3382 MS2 23/32 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 570 4.24 0.00 1 24 100 3 533.95135 1599.83951 3.60 41.90 5549 5549 MS2 28/52 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.24 0.00 0 1 100 2 738.39948 1475.79167 4.30 27.65 2132 2132 MS2 20/22 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 501 4.24 0.00 0 26 100 2 858.93256 1716.85784 3.88 34.82 3097 3097 MS2 17/28 Linfeng_20120130_CHD1_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 4.24 0.00 0 36 100 2 829.40393 1657.80058 4.61 32.48 2661 2661 MS2 21/32 Linfeng_20120130_CHD1_2.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 10 4.23 0.00 0 0 100 3 1104.77808 3312.31968 3.45 20.22 1271 1271 MS2 34/152 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 608 4.23 0.00 0 49 100 2 738.39838 1475.78948 2.82 29.46 2192 2192 MS2 19/22 Linfeng_20120130_CHD1_9.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 233 4.22 0.00 1 41 100 3 667.97058 2001.89719 3.93 39.68 4520 4520 MS2 25/60 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 514 4.22 0.00 0 8 100 2 858.93158 1716.85588 2.74 33.94 2595 2595 MS2 20/28 Linfeng_20120130_CHD1_6.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 390 4.22 0.00 0 9 25 3 665.33173 1993.98062 1.96 43.55 4116 4116 MS2 29/60 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 499 4.22 0.00 0 0 100 2 858.93274 1716.85820 4.09 33.70 3422 3422 MS2 19/28 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 574 4.22 0.00 0 36 100 2 738.39972 1475.79216 4.64 28.45 2567 2567 MS2 19/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 589 4.21 0.00 0 8 100 2 738.39813 1475.78899 2.48 28.73 2018 2018 MS2 20/22 Linfeng_20120130_CHD1_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 4.21 0.00 1 5 100 3 533.95081 1599.83786 2.57 44.17 5542 5542 MS2 28/52 Linfeng_20120130_CHD1_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 4.21 0.00 0 6 100 3 855.73041 2565.17667 3.81 27.98 2182 2182 MS2 29/100 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 540 4.21 0.00 1 9 100 2 800.42285 1599.83843 2.92 43.32 4532 4532 MS2 22/26 Linfeng_20120130_CHD1_3.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 634 4.21 0.00 1 24 100 3 615.65546 1844.95182 3.07 31.20 2871 2871 MS2 26/60 Linfeng_20120130_CHD1_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 601 4.20 0.00 0 7 96 2 679.35248 1357.69768 1.35 2.03 409 409 MS2 20/22 Linfeng_20120130_CHD1_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 421 4.20 0.00 0 2 1 2 639.35785 1277.70842 -1.26 48.55 6564 6564 MS2 18/20 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 4.20 0.00 0 6 100 2 829.40295 1657.79863 3.43 32.49 2360 2360 MS2 21/32 Linfeng_20120130_CHD1_7.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 4.20 0.00 0 3 25 3 855.72968 2565.17447 2.95 25.99 2240 2240 MS2 36/100 Linfeng_122411_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 485 4.20 0.00 0 46 100 2 858.93298 1716.85869 4.37 34.75 3454 3454 MS2 17/28 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 615 4.20 0.00 0 44 100 2 738.39825 1475.78923 2.65 29.42 2186 2186 MS2 19/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 616 4.19 0.00 0 27 100 2 738.39832 1475.78935 2.73 28.48 2488 2488 MS2 20/22 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 4.19 0.00 1 31 100 3 533.95172 1599.84061 4.29 42.37 5063 5063 MS2 31/52 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 298 4.18 0.00 0 12 25 2 997.49054 1993.97380 -1.46 44.36 5267 5267 MS2 21/30 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 4.18 0.00 0 29 100 2 829.40399 1657.80071 4.68 32.27 2943 2943 MS2 21/32 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 4.18 0.00 0 30 25 3 665.32916 1993.97293 -1.89 44.43 5344 5344 MS2 30/60 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 611 4.18 0.00 0 1 30 2 738.39777 1475.78826 1.99 28.85 2403 2403 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.18 0.00 0 46 25 2 883.36865 1765.73003 -2.71 29.66 3426 3426 MS2 26/38 Linfeng_091311_rIgG_2.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 186 4.17 0.00 1 0 100 2 1001.45123 2001.89519 2.93 31.36 3076 3076 MS2 20/30 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 555 4.17 0.00 1 17 100 2 800.41937 1599.83147 -1.43 43.59 5042 5042 MS2 22/26 Linfeng_20120130_CHD1_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 4.17 0.00 0 0 100 2 829.39648 1657.78569 -4.37 32.80 3415 3415 MS2 23/32 Linfeng_20120130_CHD1_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.17 0.00 0 4 25 3 589.25073 1765.73764 1.60 27.52 2643 2643 MS2 46/76 Linfeng_122411_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 274 4.16 0.00 0 18 25 2 829.40289 1657.79851 3.36 27.03 2241 2241 MS2 20/32 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 4.16 0.00 1 8 25 2 971.49908 1941.99089 1.64 41.10 4212 4212 MS2 24/32 Linfeng_122411_rIgG_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 629 4.15 0.00 1 15 100 3 615.65570 1844.95255 3.47 31.12 2955 2955 MS2 27/60 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.15 0.00 0 41 100 2 738.39984 1475.79241 4.80 28.31 2544 2544 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 4.14 0.00 2 12 25 3 728.71216 2184.12192 -1.69 41.40 4902 4902 MS2 32/72 Linfeng_091311_rIgG_3.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 225 4.14 0.00 1 4 100 2 1001.45355 2001.89983 5.25 39.38 4465 4465 MS2 18/30 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 565 4.14 0.00 0 9 100 2 738.39929 1475.79131 4.06 25.63 1837 1837 MS2 19/22 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 512 4.14 0.00 0 41 100 2 858.93274 1716.85820 4.09 34.93 3691 3691 MS2 22/28 Linfeng_20120130_CHD1_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 4.14 0.00 1 51 25 3 615.65094 1844.93827 -4.27 27.12 2769 2769 MS2 34/60 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 4.13 0.00 1 29 25 4 588.06195 2349.22597 3.18 51.43 5520 5520 MS2 45/120 Linfeng_122411_rIgG_2.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 184 4.13 0.00 1 18 100 2 1001.45001 2001.89275 1.71 39.68 3789 3789 MS2 16/30 Linfeng_20120130_CHD1_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 4.13 0.00 0 0 100 2 829.40332 1657.79936 3.87 33.40 3535 3535 MS2 22/32 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.13 0.00 0 2 100 2 738.39978 1475.79228 4.72 27.96 1905 1905 MS2 20/22 Linfeng_20120130_CHD1_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 4.13 0.00 0 4 25 3 553.26929 1657.79331 0.22 25.38 2026 2026 MS2 32/64 Linfeng_122411_rIgG_10.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 154 4.12 0.00 1 15 25 3 563.32965 1687.97440 2.49 31.50 3112 3112 MS2 33/64 Linfeng_122411_rIgG_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 4.12 0.00 0 11 25 3 665.33240 1993.98264 2.97 43.60 4280 4280 MS2 26/60 Linfeng_122411_rIgG_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 4.12 0.00 0 0 100 2 829.39673 1657.78618 -4.08 32.89 3440 3440 MS2 21/32 Linfeng_20120130_CHD1_5.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 454 4.12 0.00 1 39 25 3 615.65186 1844.94101 -2.78 27.31 3029 3029 MS2 31/60 Linfeng_091311_rIgG_7.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 4.11 0.00 2 6 25 4 546.78809 2184.13051 2.24 41.19 4139 4139 MS2 47/108 Linfeng_122411_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 556 4.11 0.00 0 29 100 2 651.86304 1302.71880 2.77 0.58 42 42 MS2 20/22 Linfeng_20120130_CHD1_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 4.11 0.00 0 4 5 3 572.95624 1716.85416 1.74 29.68 2729 2729 MS2 34/56 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 4.11 0.00 0 44 25 2 883.37299 1765.73870 2.20 26.11 2256 2256 MS2 29/38 Linfeng_122411_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.11 0.00 0 23 100 2 883.37457 1765.74187 3.99 29.02 2438 2438 MS2 24/38 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 569 4.11 0.00 1 32 100 3 533.95178 1599.84079 4.40 42.85 5422 5422 MS2 28/52 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 579 4.10 0.00 0 31 100 2 738.39862 1475.78996 3.15 25.67 1823 1823 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 185 4.10 0.00 1 18 100 3 673.30176 2017.89072 3.22 26.25 1920 1920 MS2 25/60 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 250 4.10 0.00 0 12 25 2 829.39972 1657.79216 -0.47 28.69 2743 2743 MS2 22/32 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.10 0.00 0 8 25 2 883.36896 1765.73064 -2.37 28.63 3286 3286 MS2 27/38 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 588 4.09 0.00 0 46 100 2 738.39868 1475.79009 3.23 30.57 2742 2742 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 263 4.09 0.00 1 10 25 4 733.88715 2932.52675 3.52 39.29 3985 3985 MS2 41/138 Linfeng_122411_rIgG_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 643 4.09 0.00 1 31 100 3 615.65436 1844.94852 1.28 31.01 3003 3003 MS2 29/60 Linfeng_20120130_CHD1_10.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 4.09 0.00 0 51 100 2 883.37433 1765.74138 3.72 29.14 2596 2596 MS2 22/38 Linfeng_20120130_CHD1_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.09 0.00 0 21 25 3 589.25049 1765.73691 1.19 26.69 2477 2477 MS2 46/76 Linfeng_122411_rIgG_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.08 0.00 0 0 25 2 883.36700 1765.72673 -4.58 28.79 3367 3367 MS2 27/38 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 4.08 0.00 0 9 6 3 572.95337 1716.84555 -3.28 30.82 3271 3271 MS2 33/56 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 563 4.08 0.00 0 7 100 2 738.39905 1475.79082 3.73 27.86 2385 2385 MS2 20/22 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 564 4.08 0.00 1 22 100 2 800.42267 1599.83806 2.69 41.89 5546 5546 MS2 22/26 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 591 4.07 0.00 0 25 100 2 738.39862 1475.78996 3.15 30.15 2655 2655 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 554 4.06 0.00 0 7 100 2 738.39880 1475.79033 3.39 27.98 2017 2017 MS2 19/22 Linfeng_20120130_CHD1_9.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 4.06 0.00 0 20 25 2 997.49017 1993.97307 -1.83 44.17 5314 5314 MS2 21/30 Linfeng_091311_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 4.06 0.00 1 3 20 3 533.94812 1599.82981 -2.47 34.62 4005 4005 MS2 29/52 Linfeng_091311_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.06 0.00 0 30 25 2 883.37128 1765.73528 0.26 27.78 2425 2425 MS2 25/38 Linfeng_122411_rIgG_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 4.06 0.00 0 2 100 2 858.93207 1716.85686 3.31 33.84 2554 2554 MS2 19/28 Linfeng_20120130_CHD1_7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 137 4.05 0.00 1 9 100 3 673.29944 2017.88376 -0.23 25.92 2055 2055 MS2 27/60 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 4.05 0.00 0 0 100 2 829.40289 1657.79851 3.36 33.24 3498 3498 MS2 22/32 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 561 4.04 0.00 0 47 100 2 738.39929 1475.79131 4.06 29.55 2436 2436 MS2 20/22 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 553 4.04 0.00 0 19 100 2 679.35352 1357.69975 2.87 0.65 60 60 MS2 20/22 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 535 4.04 0.00 0 18 100 2 738.39911 1475.79094 3.81 25.96 1807 1807 MS2 18/22 Linfeng_20120130_CHD1_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 4.04 0.00 0 5 25 3 589.25189 1765.74112 3.57 27.67 2147 2147 MS2 40/76 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 523 4.03 0.00 0 18 100 2 651.86389 1302.72051 4.08 1.60 282 282 MS2 19/22 Linfeng_20120130_CHD1_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 448 4.03 0.00 0 3 64 2 692.35211 1383.69695 4.76 45.83 5093 5093 MS2 19/22 Linfeng_20120130_CHD1_3.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 234 4.03 0.00 1 23 100 3 667.97076 2001.89774 4.21 39.33 4456 4456 MS2 28/60 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 382 4.03 0.00 0 12 25 3 665.32959 1993.97422 -1.25 43.88 5029 5029 MS2 32/60 Linfeng_091311_rIgG_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 661 4.03 0.00 1 28 100 3 615.65613 1844.95383 4.16 31.04 2698 2698 MS2 28/60 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 549 4.02 0.00 1 12 100 2 800.42010 1599.83293 -0.51 43.78 4209 4209 MS2 22/26 Linfeng_20120130_CHD1_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 4.02 0.00 0 12 25 3 589.25153 1765.74002 2.95 27.63 2458 2458 MS2 44/76 Linfeng_122411_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 119 4.02 0.00 0 10 25 3 855.72943 2565.17374 2.66 25.99 2439 2439 MS2 34/100 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 4.02 0.00 0 3 15 2 738.39905 1475.79082 3.73 26.94 1778 1778 MS2 20/22 Linfeng_20120130_CHD1_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 30 4.02 0.00 0 8 25 2 883.37195 1765.73662 1.02 27.12 2634 2634 MS2 28/38 Linfeng_122411_rIgG_5.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 87 4.02 0.00 0 8 100 2 883.37518 1765.74309 4.69 29.28 2069 2069 MS2 23/38 Linfeng_20120130_CHD1_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 4.01 0.00 0 9 100 3 572.95789 1716.85910 4.61 34.17 2848 2848 MS2 26/56 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 627 4.01 0.00 0 6 100 2 738.39832 1475.78935 2.73 28.02 1921 1921 MS2 18/22 Linfeng_20120130_CHD1_7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 185 4.01 0.00 1 9 100 3 673.30170 2017.89054 3.12 25.72 1658 1658 MS2 30/60 Linfeng_20120130_CHD1_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 612 4.01 0.00 0 0 100 2 679.35461 1357.70195 4.49 1.32 199 199 MS2 19/22 Linfeng_20120130_CHD1_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 4.00 0.00 0 12 25 3 665.32977 1993.97477 -0.98 44.37 5397 5397 MS2 30/60 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 4.00 0.00 0 13 3 3 572.95471 1716.84958 -0.93 29.45 2957 2957 MS2 31/56 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 4.00 0.00 1 0 25 3 783.74719 2349.22702 3.63 51.42 5590 5590 MS2 34/80 Linfeng_122411_rIgG_4.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 4.00 0.00 1 12 25 4 588.06201 2349.22622 3.28 51.36 5512 5512 MS2 47/120 Linfeng_122411_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 543 4.00 0.00 0 33 100 2 858.93237 1716.85747 3.66 34.66 3434 3434 MS2 20/28 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 3.99 0.00 0 47 100 2 679.35468 1357.70207 4.58 40.11 4711 4711 MS2 20/22 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 324 3.99 0.00 0 36 25 3 572.95355 1716.84610 -2.96 30.97 3542 3542 MS2 32/56 Linfeng_091311_rIgG_6.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 158 3.99 0.00 1 17 25 3 563.32904 1687.97257 1.41 31.61 3012 3012 MS2 27/64 Linfeng_122411_rIgG_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 658 3.98 0.00 1 25 100 3 615.65582 1844.95292 3.67 31.28 2887 2887 MS2 26/60 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 3.98 0.00 0 15 100 2 829.39539 1657.78349 -5.70 32.54 3344 3344 MS2 22/32 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 501 3.98 0.00 0 7 100 2 858.93115 1716.85503 2.24 34.53 3845 3845 MS2 17/28 Linfeng_20120130_CHD1_5.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 3.98 0.00 1 11 25 3 783.74738 2349.22757 3.86 51.41 5518 5518 MS2 35/80 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 447 3.97 0.00 0 4 11 2 692.35217 1383.69707 4.85 45.95 5939 5939 MS2 19/22 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 3.97 0.00 0 18 100 2 651.86426 1302.72124 4.64 0.55 35 35 MS2 19/22 Linfeng_20120130_CHD1_8.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 385 3.97 0.00 2 39 25 3 728.71539 2184.13163 2.75 41.24 4388 4388 MS2 28/72 Linfeng_122411_rIgG_6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.97 0.00 1 40 25 3 615.65118 1844.93900 -3.88 26.91 3051 3051 MS2 33/60 Linfeng_091311_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 3.96 0.00 0 5 3 3 572.95331 1716.84537 -3.38 30.74 3572 3572 MS2 31/56 Linfeng_091311_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 517 3.95 0.00 0 49 100 2 858.93127 1716.85527 2.38 34.57 3856 3856 MS2 18/28 Linfeng_20120130_CHD1_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 528 3.95 0.00 1 9 100 2 800.41760 1599.82793 -3.64 42.86 5183 5183 MS2 22/26 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 29 3.95 0.00 0 8 25 2 883.37109 1765.73491 0.05 4.57 489 489 MS2 28/38 Linfeng_122411_rIgG_8.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 520 3.95 0.00 1 14 100 2 800.42395 1599.84062 4.30 43.23 5319 5319 MS2 22/26 Linfeng_20120130_CHD1_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.94 0.00 0 5 11 2 692.35205 1383.69682 4.67 46.09 5970 5970 MS2 19/22 Linfeng_20120130_CHD1_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 522 3.94 0.00 0 5 100 2 679.35382 1357.70036 3.32 37.66 4448 4448 MS2 20/22 Linfeng_20120130_CHD1_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 598 3.94 0.00 0 24 100 3 572.95721 1716.85709 3.44 33.95 3477 3477 MS2 25/56 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 240 3.94 0.00 0 20 100 3 861.06110 2581.16874 2.68 26.46 1773 1773 MS2 23/100 Linfeng_20120130_CHD1_2.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 3.93 0.00 0 2 18 2 883.36957 1765.73186 -1.67 4.22 457 457 MS2 27/38 Linfeng_122411_rIgG_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 261 3.93 0.00 0 12 100 3 861.06158 2581.17020 3.25 26.80 1763 1763 MS2 29/100 Linfeng_20120130_CHD1_3.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.93 0.00 0 3 25 3 1104.78027 3312.32627 5.45 21.43 1551 1551 MS2 30/152 Linfeng_122411_rIgG_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 415 3.93 0.00 0 18 100 2 829.40387 1657.80046 4.54 32.46 2617 2617 MS2 20/32 Linfeng_20120130_CHD1_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 676 3.93 0.00 1 30 100 3 615.65497 1844.95035 2.28 30.92 2958 2958 MS2 25/60 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.92 0.00 0 3 11 2 590.30548 1179.60369 2.72 26.99 2044 2044 MS2 17/18 Linfeng_20120130_CHD1_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 620 3.92 0.00 0 8 100 2 679.35449 1357.70171 4.31 11.61 874 874 MS2 20/22 Linfeng_20120130_CHD1_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 3.91 0.00 0 46 100 2 829.40326 1657.79924 3.80 32.28 3283 3283 MS2 22/32 Linfeng_20120130_CHD1_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 543 3.91 0.00 0 4 100 2 679.35382 1357.70036 3.32 37.78 3562 3562 MS2 20/22 Linfeng_20120130_CHD1_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 557 3.90 0.00 0 3 12 2 590.30548 1179.60369 2.72 26.79 2005 2005 MS2 17/18 Linfeng_20120130_CHD1_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.90 0.00 0 10 25 3 665.32904 1993.97257 -2.08 44.37 5237 5237 MS2 30/60 Linfeng_091311_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 482 3.90 0.00 0 4 42 2 692.35168 1383.69609 4.14 45.92 5928 5928 MS2 18/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 587 3.90 0.00 0 37 100 2 738.39819 1475.78911 2.57 29.60 2443 2443 MS2 20/22 Linfeng_20120130_CHD1_1.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 310 3.90 0.00 1 8 18 3 762.71033 2286.11643 -3.71 32.79 3532 3532 MS2 31/76 Linfeng_091311_rIgG_1.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 234 3.90 0.00 1 41 100 3 667.97076 2001.89774 4.21 31.46 2785 2785 MS2 25/60 Linfeng_20120130_CHD1_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 453 3.90 0.00 1 10 19 3 615.65192 1844.94120 -2.69 27.05 3026 3026 MS2 33/60 Linfeng_091311_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.90 0.00 0 16 100 2 679.35394 1357.70061 3.50 37.68 3711 3711 MS2 20/22 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 529 3.89 0.00 0 20 100 2 651.86237 1302.71745 1.74 1.98 275 275 MS2 19/22 Linfeng_20120130_CHD1_7.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 3.89 0.00 1 13 25 3 783.74475 2349.21970 0.51 52.71 6291 6291 MS2 35/80 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 3.89 0.00 0 41 100 2 829.40375 1657.80022 4.39 32.52 2533 2533 MS2 20/32 Linfeng_20120130_CHD1_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 380 3.89 0.00 0 2 2 2 639.35907 1277.71086 0.65 48.55 5741 5741 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 232 3.88 0.00 1 31 100 3 667.97064 2001.89737 4.02 39.72 4529 4529 MS2 25/60 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 526 3.87 0.00 0 7 100 2 679.35394 1357.70061 3.50 37.41 4060 4060 MS2 20/22 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 3.87 0.00 0 0 100 2 829.39740 1657.78752 -3.27 32.97 3461 3461 MS2 21/32 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 524 3.87 0.00 0 2 32 2 590.30524 1179.60320 2.31 27.36 2119 2119 MS2 17/18 Linfeng_20120130_CHD1_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 3.87 0.00 0 27 25 3 665.32922 1993.97312 -1.80 44.46 5248 5248 MS2 30/60 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 3.86 0.00 1 2 25 4 588.06195 2349.22597 3.18 51.50 5908 5908 MS2 46/120 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 542 3.86 0.00 0 25 100 2 651.86334 1302.71941 3.24 1.39 230 230 MS2 19/22 Linfeng_20120130_CHD1_7.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 3.86 0.00 0 8 81 2 679.35333 1357.69939 2.61 0.65 61 61 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.86 0.00 0 7 7 2 679.34894 1357.69060 -3.87 33.37 3608 3608 MS2 20/22 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 539 3.86 0.00 0 2 14 2 590.30554 1179.60381 2.83 27.03 2054 2054 MS2 17/18 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.85 0.00 0 5 100 3 861.06177 2581.17075 3.46 26.58 1969 1969 MS2 26/100 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 3.84 0.00 0 5 25 2 829.40344 1657.79961 4.02 25.92 2019 2019 MS2 21/32 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 3.84 0.00 0 3 92 2 692.35229 1383.69731 5.02 46.01 4945 4945 MS2 19/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 507 3.84 0.00 0 27 100 2 651.86487 1302.72246 5.58 1.51 236 236 MS2 18/22 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 591 3.83 0.00 0 3 26 2 590.30560 1179.60393 2.93 27.06 2037 2037 MS2 17/18 Linfeng_20120130_CHD1_1.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.83 0.00 2 2 25 4 626.07025 2501.25918 2.90 30.03 2419 2419 MS2 38/126 Linfeng_122411_rIgG_7.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.83 0.00 0 16 25 2 883.36823 1765.72917 -3.20 28.98 3324 3324 MS2 28/38 Linfeng_091311_rIgG_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 614 3.82 0.00 0 16 100 2 679.35461 1357.70195 4.49 0.80 93 93 MS2 18/22 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 529 3.82 0.00 0 7 100 2 651.86438 1302.72148 4.83 10.77 707 707 MS2 19/22 Linfeng_20120130_CHD1_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.82 0.00 0 44 100 2 829.40198 1657.79668 2.25 32.11 3233 3233 MS2 22/32 Linfeng_20120130_CHD1_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.82 0.00 0 8 100 2 651.86340 1302.71953 3.33 1.55 280 280 MS2 19/22 Linfeng_20120130_CHD1_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 514 3.82 0.00 0 10 100 2 858.93170 1716.85613 2.88 34.72 3822 3822 MS2 18/28 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 553 3.82 0.00 0 3 56 2 651.86139 1302.71550 0.24 2.15 154 154 MS2 19/22 Linfeng_20120130_CHD1_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 3.82 0.00 0 0 100 2 829.40167 1657.79607 1.89 32.71 2411 2411 MS2 22/32 Linfeng_20120130_CHD1_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 565 3.82 0.00 0 2 33 2 590.30585 1179.60442 3.35 27.09 1795 1795 MS2 17/18 Linfeng_20120130_CHD1_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 593 3.81 0.00 0 2 67 2 590.30646 1179.60564 4.38 27.18 1864 1864 MS2 17/18 Linfeng_20120130_CHD1_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 567 3.81 0.00 1 0 100 2 800.42120 1599.83513 0.86 43.80 4641 4641 MS2 21/26 Linfeng_20120130_CHD1_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 3.81 0.00 0 15 25 3 572.95349 1716.84592 -3.06 30.66 3522 3522 MS2 28/56 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 3.81 0.00 1 16 100 2 800.42078 1599.83428 0.33 43.05 5230 5230 MS2 22/26 Linfeng_20120130_CHD1_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 3.81 0.00 0 4 28 2 692.35193 1383.69658 4.49 45.75 5894 5894 MS2 19/22 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 591 3.80 0.00 0 2 39 2 590.30609 1179.60491 3.76 26.96 2020 2020 MS2 17/18 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 562 3.80 0.00 0 26 100 2 738.39905 1475.79082 3.73 34.94 3694 3694 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 537 3.80 0.00 0 13 100 2 679.35352 1357.69975 2.87 37.68 4350 4350 MS2 18/22 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 523 3.80 0.00 0 2 46 2 590.30676 1179.60625 4.90 26.98 1833 1833 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 551 3.80 0.00 0 2 99 2 590.30524 1179.60320 2.31 30.16 2786 2786 MS2 17/18 Linfeng_20120130_CHD1_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 483 3.79 0.00 0 3 100 2 692.35175 1383.69621 4.23 46.02 4472 4472 MS2 19/22 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 615 3.79 0.00 0 13 100 2 679.35455 1357.70183 4.40 1.22 191 191 MS2 19/22 Linfeng_20120130_CHD1_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 3.79 0.00 0 3 25 3 855.72504 2565.16056 -2.47 27.03 3024 3024 MS2 36/100 Linfeng_091311_rIgG_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 187 3.78 0.00 1 11 100 3 673.30231 2017.89237 4.03 25.40 2097 2097 MS2 27/60 Linfeng_20120130_CHD1_10.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.78 0.00 0 21 25 2 997.49017 1993.97307 -1.83 44.12 5061 5061 MS2 21/30 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.78 0.00 0 5 13 2 679.34949 1357.69170 -3.06 33.60 3873 3873 MS2 20/22 Linfeng_091311_rIgG_7.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 3.78 0.00 0 19 25 3 665.32916 1993.97293 -1.89 43.87 5276 5276 MS2 31/60 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 592 3.78 0.00 0 36 100 2 738.39844 1475.78960 2.90 29.35 2038 2038 MS2 16/22 Linfeng_20120130_CHD1_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 521 3.78 0.00 0 19 100 2 858.93146 1716.85564 2.60 33.63 3482 3482 MS2 19/28 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.78 0.00 0 4 19 2 651.86310 1302.71892 2.86 43.73 4702 4702 MS2 19/22 Linfeng_122411_rIgG_6.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.78 0.00 0 2 25 4 828.83502 3312.31826 3.03 21.32 1564 1564 MS2 52/228 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 583 3.77 0.00 0 2 32 2 590.30615 1179.60503 3.86 27.16 1805 1805 MS2 17/18 Linfeng_20120130_CHD1_3.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 184 3.77 0.00 1 8 100 3 673.30200 2017.89145 3.58 26.16 1906 1906 MS2 31/60 Linfeng_20120130_CHD1_4.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.77 0.00 0 13 25 2 997.49182 1993.97637 -0.17 43.37 4866 4866 MS2 20/30 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 572 3.77 0.00 0 11 100 2 738.39935 1475.79143 4.14 25.93 1678 1678 MS2 19/22 Linfeng_20120130_CHD1_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 3.77 0.00 0 4 40 2 590.30591 1179.60454 3.45 27.29 2110 2110 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 40 3.77 0.00 0 14 25 3 589.25153 1765.74002 2.95 27.67 1977 1977 MS2 34/76 Linfeng_122411_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 608 3.77 0.00 0 4 100 2 590.30591 1179.60454 3.45 26.54 1952 1952 MS2 17/18 Linfeng_20120130_CHD1_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.77 0.00 1 17 25 3 615.65192 1844.94120 -2.69 26.93 3018 3018 MS2 30/60 Linfeng_091311_rIgG_3.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 3.77 0.00 2 8 25 4 546.78558 2184.12050 -2.34 41.64 4904 4904 MS2 44/108 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 259 3.76 0.00 0 23 25 2 829.40155 1657.79582 1.74 29.14 2860 2860 MS2 20/32 Linfeng_122411_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 228 3.76 0.00 0 0 25 2 829.39862 1657.78996 -1.80 30.26 3449 3449 MS2 20/32 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 3.76 0.00 0 21 20 2 829.39832 1657.78935 -2.16 28.32 2804 2804 MS2 22/32 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 383 3.76 0.00 0 0 1 2 639.35828 1277.70928 -0.59 48.53 7240 7240 MS2 18/20 Linfeng_20120130_CHD1_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 3.76 0.00 0 9 25 2 997.49548 1993.98369 3.50 43.64 4534 4534 MS2 21/30 Linfeng_122411_rIgG_2.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 188 3.76 0.00 1 15 100 3 673.30261 2017.89328 4.49 25.68 1654 1654 MS2 27/60 Linfeng_20120130_CHD1_3.raw High GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 8 3.76 0.00 0 12 25 2 1192.48413 2383.96099 3.78 19.96 1504 1504 MS2 22/60 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 556 3.75 0.00 0 15 100 2 679.35339 1357.69951 2.70 0.80 102 102 MS2 20/22 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 3.75 0.00 0 4 13 2 590.30566 1179.60405 3.04 26.81 1992 1992 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 550 3.74 0.00 1 37 100 2 800.41895 1599.83061 -1.96 42.91 5195 5195 MS2 22/26 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 232 3.74 0.00 0 1 17 2 829.39746 1657.78765 -3.19 30.22 3191 3191 MS2 21/32 Linfeng_091311_rIgG_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 275 3.74 0.00 0 3 25 2 829.40259 1657.79790 2.99 29.10 2437 2437 MS2 22/32 Linfeng_122411_rIgG_9.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 3.74 0.00 0 5 100 3 861.06244 2581.17276 4.24 27.47 1909 1909 MS2 31/100 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 297 3.74 0.00 0 62 25 2 858.92786 1716.84844 -1.60 31.16 3581 3581 MS2 20/28 Linfeng_091311_rIgG_4.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 208 3.73 0.00 1 49 100 3 667.96899 2001.89243 1.55 31.52 3111 3111 MS2 26/60 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 528 3.73 0.00 0 11 100 2 738.39978 1475.79228 4.72 25.85 2163 2163 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.73 0.00 1 5 10 3 533.94800 1599.82944 -2.69 34.36 4005 4005 MS2 31/52 Linfeng_091311_rIgG_3.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 3.73 0.00 0 0 25 2 883.37390 1765.74053 3.23 27.62 1973 1973 MS2 22/38 Linfeng_122411_rIgG_1.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 187 3.73 0.00 1 13 100 3 673.30219 2017.89200 3.85 25.54 1807 1807 MS2 30/60 Linfeng_20120130_CHD1_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.73 0.00 0 4 11 2 679.34943 1357.69158 -3.15 33.56 3931 3931 MS2 20/22 Linfeng_091311_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 484 3.72 0.00 0 37 100 2 692.34955 1383.69182 1.05 44.57 6197 6197 MS2 18/22 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 588 3.72 0.00 0 1 100 2 590.30585 1179.60442 3.35 27.26 1930 1930 MS2 17/18 Linfeng_20120130_CHD1_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 322 3.72 0.00 0 6 6 3 572.95325 1716.84519 -3.49 30.98 3591 3591 MS2 33/56 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 582 3.72 0.00 0 3 100 2 590.30591 1179.60454 3.45 26.90 2241 2241 MS2 17/18 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 573 3.72 0.00 0 41 100 2 738.39899 1475.79070 3.64 28.24 2531 2531 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 613 3.72 0.00 0 25 100 2 738.39783 1475.78838 2.07 28.79 1985 1985 MS2 16/22 Linfeng_20120130_CHD1_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 583 3.71 0.00 0 3 100 2 590.30640 1179.60552 4.28 27.46 1843 1843 MS2 17/18 Linfeng_20120130_CHD1_3.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.71 0.00 1 16 25 3 783.74396 2349.21732 -0.50 52.63 6268 6268 MS2 33/80 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 610 3.71 0.00 0 7 100 2 590.30627 1179.60527 4.07 30.24 2183 2183 MS2 17/18 Linfeng_20120130_CHD1_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 219 3.70 0.00 0 3 25 2 829.39838 1657.78948 -2.09 30.34 3443 3443 MS2 22/32 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 481 3.70 0.00 1 0 100 2 670.84021 1340.67314 2.88 18.03 1452 1452 MS2 18/22 Linfeng_20120130_CHD1_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 3.70 0.00 0 8 100 3 861.06152 2581.17002 3.18 26.35 1927 1927 MS2 33/100 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 231 3.70 0.00 0 8 14 2 829.39832 1657.78935 -2.16 28.60 2586 2586 MS2 24/32 Linfeng_122411_rIgG_3.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 230 3.70 0.00 0 1 25 2 829.39825 1657.78923 -2.24 30.06 3481 3481 MS2 21/32 Linfeng_091311_rIgG_2.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 661 3.70 0.00 1 34 100 3 615.65619 1844.95401 4.26 31.19 2446 2446 MS2 27/60 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 493 3.70 0.00 0 17 100 2 651.86450 1302.72173 5.02 46.82 5101 5101 MS2 19/22 Linfeng_20120130_CHD1_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 3.70 0.00 0 2 100 2 590.30640 1179.60552 4.28 27.35 2086 2086 MS2 17/18 Linfeng_20120130_CHD1_1.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 102 3.70 0.00 0 2 25 3 855.72479 2565.15982 -2.76 27.19 2778 2778 MS2 35/100 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 588 3.69 0.00 0 7 100 2 590.30627 1179.60527 4.07 27.64 1934 1934 MS2 17/18 Linfeng_20120130_CHD1_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.69 0.00 1 2 19 3 533.94800 1599.82944 -2.69 34.55 3962 3962 MS2 30/52 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 160 3.69 0.00 1 0 100 2 1009.44940 2017.89153 3.62 25.38 1873 1873 MS2 20/30 Linfeng_20120130_CHD1_5.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 230 3.69 0.00 1 44 100 3 667.97028 2001.89627 3.48 31.25 2976 2976 MS2 27/60 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 3.69 0.00 0 3 61 2 590.30579 1179.60430 3.24 27.29 1879 1879 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 3.69 0.00 0 4 25 2 829.39838 1657.78948 -2.09 30.36 3447 3447 MS2 22/32 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 635 3.69 0.00 1 18 100 3 615.65552 1844.95200 3.17 31.08 2948 2948 MS2 25/60 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 595 3.69 0.00 0 12 100 2 590.30640 1179.60552 4.28 27.79 2154 2154 MS2 17/18 Linfeng_20120130_CHD1_1.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 175 3.68 0.00 1 16 100 3 673.30151 2017.88999 2.85 25.77 1788 1788 MS2 28/60 Linfeng_20120130_CHD1_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.68 0.00 0 8 100 2 829.40222 1657.79717 2.55 33.54 3566 3566 MS2 17/32 Linfeng_20120130_CHD1_10.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.68 0.00 0 34 100 2 829.40338 1657.79949 3.95 32.43 3131 3131 MS2 21/32 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 599 3.68 0.00 0 8 100 2 590.30597 1179.60466 3.55 27.69 2182 2182 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 579 3.68 0.00 0 4 33 2 590.30591 1179.60454 3.45 26.93 1827 1827 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 609 3.68 0.00 0 7 100 2 590.30646 1179.60564 4.38 30.34 2198 2198 MS2 17/18 Linfeng_20120130_CHD1_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 3.68 0.00 0 22 100 3 855.72992 2565.17521 3.24 28.77 2533 2533 MS2 22/100 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.68 0.00 0 4 100 2 590.30658 1179.60588 4.59 27.52 1918 1918 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.67 0.00 0 3 100 2 590.30652 1179.60576 4.48 27.48 1912 1912 MS2 17/18 Linfeng_20120130_CHD1_2.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 220 3.67 0.00 1 33 100 3 667.96979 2001.89481 2.74 31.32 2989 2989 MS2 28/60 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 616 3.67 0.00 0 5 100 2 590.30560 1179.60393 2.93 26.87 1810 1810 MS2 17/18 Linfeng_20120130_CHD1_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 511 3.67 0.00 0 32 100 2 651.86346 1302.71965 3.42 1.09 149 149 MS2 19/22 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 531 3.66 0.00 0 2 100 2 590.30524 1179.60320 2.31 26.97 2251 2251 MS2 17/18 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 239 3.66 0.00 0 0 25 2 829.39880 1657.79033 -1.57 30.11 3442 3442 MS2 22/32 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 596 3.66 0.00 0 3 92 2 590.30603 1179.60478 3.66 27.22 2066 2066 MS2 17/18 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 3.66 0.00 0 13 25 3 572.95288 1716.84409 -4.13 31.03 3538 3538 MS2 32/56 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 476 3.66 0.00 0 7 100 2 651.86536 1302.72344 6.33 10.86 939 939 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 598 3.66 0.00 0 10 100 2 679.35486 1357.70244 4.85 1.44 253 253 MS2 19/22 Linfeng_20120130_CHD1_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 3.66 0.00 0 19 100 3 861.06183 2581.17093 3.53 26.88 2239 2239 MS2 28/100 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 601 3.66 0.00 0 7 100 2 590.30597 1179.60466 3.55 30.20 2175 2175 MS2 17/18 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 3.65 0.00 0 13 100 3 861.06183 2581.17093 3.53 26.27 1917 1917 MS2 29/100 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 491 3.65 0.00 1 5 100 2 670.84015 1340.67302 2.79 18.05 1159 1159 MS2 17/22 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 251 3.64 0.00 0 19 25 3 553.26770 1657.78855 -2.65 30.16 3495 3495 MS2 33/64 Linfeng_091311_rIgG_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.64 0.00 1 13 25 3 508.60092 1523.78821 -0.32 30.17 2996 2996 MS2 25/44 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 292 3.64 0.00 0 11 25 2 858.92737 1716.84746 -2.17 30.72 3569 3569 MS2 23/28 Linfeng_091311_rIgG_2.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.64 0.00 2 5 1 4 626.06921 2501.25503 1.25 29.80 2776 2776 MS2 44/126 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 534 3.64 0.00 0 15 53 3 572.95551 1716.85196 0.46 33.87 3684 3684 MS2 25/56 Linfeng_20120130_CHD1_5.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 137 3.64 0.00 1 8 25 2 844.49097 1687.97466 2.65 31.63 2984 2984 MS2 23/32 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 605 3.64 0.00 0 13 100 2 590.30640 1179.60552 4.28 30.48 2215 2215 MS2 17/18 Linfeng_20120130_CHD1_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 588 3.64 0.00 0 9 100 2 590.30634 1179.60539 4.17 26.74 1807 1807 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 451 3.63 0.00 0 4 12 2 692.35205 1383.69682 4.67 46.03 5956 5956 MS2 18/22 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 563 3.63 0.00 0 4 100 2 590.30542 1179.60356 2.62 30.16 2112 2112 MS2 17/18 Linfeng_20120130_CHD1_7.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.63 0.00 1 12 25 2 800.41888 1599.83049 -2.04 34.57 4009 4009 MS2 22/26 Linfeng_091311_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.63 0.00 0 16 100 2 858.93365 1716.86003 5.16 33.86 2794 2794 MS2 16/28 Linfeng_20120130_CHD1_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 531 3.63 0.00 1 15 100 3 508.60306 1523.79462 3.88 40.26 4616 4616 MS2 21/44 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 3.63 0.00 0 70 100 2 829.40344 1657.79961 4.02 32.35 3113 3113 MS2 21/32 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 3.63 0.00 0 4 100 2 590.30573 1179.60417 3.14 30.19 2282 2282 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 589 3.63 0.00 0 2 83 2 590.30597 1179.60466 3.55 27.43 2135 2135 MS2 17/18 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 3.62 0.00 0 13 100 3 861.06177 2581.17075 3.46 27.13 2353 2353 MS2 24/100 Linfeng_20120130_CHD1_10.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.62 0.00 0 11 100 3 861.06177 2581.17075 3.46 27.64 2171 2171 MS2 29/100 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 277 3.62 0.00 0 2 100 3 861.06268 2581.17350 4.52 27.36 2089 2089 MS2 28/100 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.62 0.00 0 2 5 2 651.86334 1302.71941 3.24 46.87 6384 6384 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 3.62 0.00 1 4 25 3 647.99951 1941.98398 -1.92 42.05 4955 4955 MS2 30/64 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 599 3.62 0.00 0 3 46 2 590.30597 1179.60466 3.55 27.32 2114 2114 MS2 17/18 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 3.62 0.00 0 53 100 2 829.40308 1657.79888 3.58 32.21 3158 3158 MS2 20/32 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 589 3.62 0.00 0 5 100 2 590.30560 1179.60393 2.93 27.28 2375 2375 MS2 17/18 Linfeng_20120130_CHD1_10.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 3.62 0.00 1 15 25 2 800.41846 1599.82964 -2.57 34.40 4010 4010 MS2 22/26 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 593 3.62 0.00 0 4 100 2 590.30597 1179.60466 3.55 27.74 2190 2190 MS2 17/18 Linfeng_20120130_CHD1_4.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 3.62 0.00 2 3 25 4 546.78503 2184.11831 -3.34 41.33 4955 4955 MS2 48/108 Linfeng_091311_rIgG_2.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.61 0.00 2 19 25 4 546.78802 2184.13027 2.13 41.15 3969 3969 MS2 30/108 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 3.61 0.00 0 13 85 3 572.95782 1716.85892 4.51 34.05 3307 3307 MS2 30/56 Linfeng_20120130_CHD1_1.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 3.61 0.00 2 14 18 3 728.71204 2184.12156 -1.86 41.38 4703 4703 MS2 29/72 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 617 3.61 0.00 0 3 96 2 590.30579 1179.60430 3.24 27.40 1896 1896 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 548 3.61 0.00 0 8 100 2 590.30542 1179.60356 2.62 30.11 2270 2270 MS2 17/18 Linfeng_20120130_CHD1_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 3.61 0.00 2 74 25 3 728.71240 2184.12265 -1.35 41.72 4903 4903 MS2 30/72 Linfeng_091311_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 595 3.61 0.00 0 3 30 2 590.30566 1179.60405 3.04 27.08 2166 2166 MS2 17/18 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 611 3.61 0.00 0 28 100 2 590.30609 1179.60491 3.76 30.62 2236 2236 MS2 17/18 Linfeng_20120130_CHD1_3.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 121 3.61 0.00 0 4 25 3 855.73016 2565.17594 3.52 25.93 2258 2258 MS2 34/100 Linfeng_122411_rIgG_2.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.60 0.00 1 15 25 2 800.41864 1599.83000 -2.34 34.43 4006 4006 MS2 22/26 Linfeng_091311_rIgG_4.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.60 0.00 1 5 5 3 508.60098 1523.78839 -0.20 29.82 2778 2778 MS2 25/44 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 3.60 0.00 0 7 100 2 590.30536 1179.60344 2.52 26.74 2217 2217 MS2 17/18 Linfeng_20120130_CHD1_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 300 3.60 0.00 0 3 25 2 858.92755 1716.84783 -1.95 30.75 3527 3527 MS2 23/28 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 595 3.60 0.00 0 2 58 2 590.30640 1179.60552 4.28 26.89 1824 1824 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 500 3.60 0.00 0 5 28 2 651.86536 1302.72344 6.33 46.85 6303 6303 MS2 19/22 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 572 3.60 0.00 0 7 100 2 590.30621 1179.60515 3.97 30.26 2296 2296 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 3.60 0.00 1 17 25 3 783.74677 2349.22574 3.08 51.47 5904 5904 MS2 32/80 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 3.60 0.00 0 5 12 2 858.92639 1716.84551 -3.31 30.98 3592 3592 MS2 23/28 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 316 3.59 0.00 0 9 25 3 572.95319 1716.84500 -3.60 30.94 3522 3522 MS2 30/56 Linfeng_091311_rIgG_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 631 3.59 0.00 1 24 100 3 615.65558 1844.95218 3.27 31.05 2943 2943 MS2 30/60 Linfeng_20120130_CHD1_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 548 3.59 0.00 0 4 100 2 679.35339 1357.69951 2.70 37.81 3518 3518 MS2 18/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.59 0.00 0 24 25 3 572.95380 1716.84684 -2.53 30.92 3485 3485 MS2 31/56 Linfeng_091311_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 523 3.59 0.00 0 2 100 2 679.35345 1357.69963 2.79 37.90 3147 3147 MS2 18/22 Linfeng_20120130_CHD1_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 587 3.58 0.00 0 11 100 2 590.30579 1179.60430 3.24 30.46 2324 2324 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 333 3.58 0.00 0 24 25 2 997.49457 1993.98186 2.58 43.64 4528 4528 MS2 20/30 Linfeng_122411_rIgG_3.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 175 3.58 0.00 1 10 100 3 673.30139 2017.88962 2.67 26.09 1892 1892 MS2 28/60 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 508 3.58 0.00 0 11 100 2 858.93140 1716.85552 2.52 34.66 3718 3718 MS2 16/28 Linfeng_20120130_CHD1_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 279 3.58 0.00 0 7 100 3 861.06262 2581.17331 4.45 27.16 2283 2283 MS2 26/100 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 579 3.57 0.00 0 2 42 2 590.30634 1179.60539 4.17 26.66 1967 1967 MS2 17/18 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.57 0.00 0 5 19 2 679.34961 1357.69194 -2.88 33.23 3860 3860 MS2 20/22 Linfeng_091311_rIgG_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 3.57 0.00 0 18 100 2 679.35437 1357.70146 4.13 0.94 126 126 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 3.57 0.00 2 24 100 3 401.23596 1201.69333 2.80 16.67 1067 1067 MS2 23/36 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 3.57 0.00 0 2 14 2 858.92700 1716.84673 -2.59 30.97 3493 3493 MS2 21/28 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 227 3.57 0.00 0 1 25 2 829.39777 1657.78826 -2.83 30.25 3568 3568 MS2 21/32 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 453 3.57 0.00 0 2 47 2 692.35114 1383.69499 3.35 46.08 4757 4757 MS2 18/22 Linfeng_20120130_CHD1_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 589 3.57 0.00 0 3 100 2 590.30627 1179.60527 4.07 27.45 1907 1907 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 590 3.57 0.00 0 4 100 2 590.30609 1179.60491 3.76 26.84 1883 1883 MS2 16/18 Linfeng_20120130_CHD1_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 518 3.57 0.00 0 6 88 2 633.32397 1265.64067 2.70 29.53 2668 2668 MS2 17/20 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.56 0.00 1 15 25 4 588.06195 2349.22597 3.18 51.48 5598 5598 MS2 39/120 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 605 3.56 0.00 0 4 100 2 590.30640 1179.60552 4.28 26.80 1813 1813 MS2 17/18 Linfeng_20120130_CHD1_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 3.56 0.00 0 1 21 2 858.93091 1716.85454 1.96 29.69 2730 2730 MS2 22/28 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 570 3.56 0.00 0 44 100 2 738.39911 1475.79094 3.81 28.28 1950 1950 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 553 3.56 0.00 0 6 100 2 679.35352 1357.69975 2.87 37.57 4206 4206 MS2 20/22 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 231 3.56 0.00 0 4 25 2 829.39862 1657.78996 -1.80 30.02 3437 3437 MS2 20/32 Linfeng_091311_rIgG_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.56 0.00 0 30 25 2 679.35663 1357.70598 7.46 31.98 2905 2905 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 3.55 0.00 0 5 25 2 858.92657 1716.84587 -3.09 30.99 3528 3528 MS2 21/28 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 116 3.55 0.00 0 19 25 3 855.72797 2565.16935 0.95 25.82 2461 2461 MS2 30/100 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 539 3.55 0.00 0 4 100 2 590.30511 1179.60295 2.10 30.22 2286 2286 MS2 17/18 Linfeng_20120130_CHD1_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 560 3.55 0.00 0 9 100 2 590.30542 1179.60356 2.62 26.84 2120 2120 MS2 17/18 Linfeng_20120130_CHD1_5.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 156 3.55 0.00 1 21 25 3 563.32990 1687.97513 2.93 31.47 2744 2744 MS2 29/64 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 605 3.55 0.00 0 8 100 2 590.30603 1179.60478 3.66 28.07 2249 2249 MS2 17/18 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 3.55 0.00 0 25 100 2 829.40430 1657.80132 5.05 33.39 3178 3178 MS2 17/32 Linfeng_20120130_CHD1_1.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 676 3.55 0.00 1 18 100 3 615.65497 1844.95035 2.28 30.83 2936 2936 MS2 26/60 Linfeng_20120130_CHD1_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 3.54 0.00 0 7 100 3 861.06219 2581.17203 3.96 27.59 2164 2164 MS2 25/100 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 351 3.54 0.00 0 2 25 2 858.93073 1716.85417 1.74 29.97 2968 2968 MS2 22/28 Linfeng_122411_rIgG_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.54 0.00 0 15 100 3 861.06207 2581.17167 3.81 26.25 1914 1914 MS2 28/100 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 552 3.54 0.00 0 0 100 2 679.35211 1357.69695 0.81 0.67 73 73 MS2 20/22 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 535 3.54 0.00 0 16 100 2 679.35400 1357.70073 3.59 1.12 170 170 MS2 18/22 Linfeng_20120130_CHD1_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 254 3.54 0.00 0 5 100 3 861.06140 2581.16965 3.03 27.09 2271 2271 MS2 29/100 Linfeng_20120130_CHD1_8.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 605 3.54 0.00 0 6 71 2 679.35321 1357.69914 2.43 1.88 364 364 MS2 20/22 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 590 3.53 0.00 0 7 100 2 590.30634 1179.60539 4.17 27.57 1926 1926 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 447 3.53 0.00 0 6 100 2 692.35193 1383.69658 4.49 45.90 4447 4447 MS2 18/22 Linfeng_20120130_CHD1_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.53 0.00 0 4 3 2 679.34967 1357.69206 -2.79 33.38 3871 3871 MS2 20/22 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 524 3.53 0.00 0 23 100 2 651.86359 1302.71990 3.61 0.71 68 68 MS2 19/22 Linfeng_20120130_CHD1_9.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 288 3.53 0.00 0 5 10 2 858.92804 1716.84880 -1.39 0.03 5 5 MS2 22/28 Linfeng_122411_rIgG_1.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 594 3.53 0.00 2 7 100 4 626.07019 2501.25893 2.81 39.10 3694 3694 MS2 33/126 Linfeng_20120130_CHD1_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 574 3.53 0.00 0 4 100 2 590.30560 1179.60393 2.93 30.33 2131 2131 MS2 16/18 Linfeng_20120130_CHD1_7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 175 3.52 0.00 1 11 100 3 673.30157 2017.89017 2.94 25.27 1856 1856 MS2 29/60 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 591 3.52 0.00 0 16 100 2 590.30640 1179.60552 4.28 29.94 2242 2242 MS2 17/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 452 3.52 0.00 0 1 100 2 692.35199 1383.69670 4.58 46.12 4491 4491 MS2 18/22 Linfeng_20120130_CHD1_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 358 3.52 0.00 0 6 13 2 679.34943 1357.69158 -3.15 33.50 3871 3871 MS2 20/22 Linfeng_091311_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 264 3.52 0.00 0 0 25 2 829.40393 1657.80058 4.61 29.08 2077 2077 MS2 21/32 Linfeng_122411_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 610 3.52 0.00 0 4 100 2 590.30621 1179.60515 3.97 30.23 2289 2289 MS2 17/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.52 0.00 0 17 100 2 590.30652 1179.60576 4.48 27.62 2127 2127 MS2 17/18 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 489 3.52 0.00 0 3 29 2 692.34790 1383.68852 -1.33 45.58 6470 6470 MS2 18/22 Linfeng_20120130_CHD1_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 3.52 0.00 0 3 100 3 855.73022 2565.17612 3.59 28.48 1972 1972 MS2 30/100 Linfeng_20120130_CHD1_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 3.52 0.00 0 8 25 2 858.92859 1716.84990 -0.75 29.39 2949 2949 MS2 23/28 Linfeng_122411_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 356 3.51 0.00 0 3 9 2 679.34955 1357.69182 -2.97 33.56 3861 3861 MS2 20/22 Linfeng_091311_rIgG_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 260 3.51 0.00 0 5 25 2 829.40155 1657.79582 1.74 28.55 2611 2611 MS2 22/32 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 3.51 0.00 0 20 100 2 692.35181 1383.69634 4.32 45.53 5846 5846 MS2 17/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTKWELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 3.51 0.00 1 8 25 4 733.88684 2932.52553 3.11 39.43 4164 4164 MS2 42/138 Linfeng_122411_rIgG_6.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 267 3.51 0.00 0 23 25 3 553.26825 1657.79020 -1.66 30.14 3446 3446 MS2 33/64 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 590 3.51 0.00 0 3 100 2 590.30573 1179.60417 3.14 26.83 2230 2230 MS2 17/18 Linfeng_20120130_CHD1_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 214 3.51 0.00 0 15 25 2 829.39661 1657.78594 -4.23 30.42 3517 3517 MS2 21/32 Linfeng_091311_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 603 3.51 0.00 0 12 100 2 590.30579 1179.60430 3.24 28.10 2254 2254 MS2 17/18 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 583 3.51 0.00 0 14 100 2 590.30585 1179.60442 3.35 30.01 2256 2256 MS2 17/18 Linfeng_20120130_CHD1_9.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 3.51 0.00 0 4 3 2 679.34888 1357.69048 -3.96 33.28 3910 3910 MS2 20/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 627 3.51 0.00 0 6 100 2 590.30566 1179.60405 3.04 26.76 1849 1849 MS2 17/18 Linfeng_20120130_CHD1_6.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 637 3.51 0.00 1 36 100 3 615.65521 1844.95108 2.67 31.36 2996 2996 MS2 23/60 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 592 3.50 0.00 0 25 100 2 590.30640 1179.60552 4.28 29.46 2522 2522 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 214 3.50 0.00 0 9 25 2 829.39655 1657.78581 -4.30 30.28 3401 3401 MS2 20/32 Linfeng_091311_rIgG_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.50 0.00 1 3 13 3 508.60129 1523.78931 0.40 29.80 2744 2744 MS2 24/44 Linfeng_122411_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 307 3.49 0.00 0 23 25 2 639.35968 1277.71208 1.61 38.39 3848 3848 MS2 18/20 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 266 3.49 0.00 0 8 100 3 855.73047 2565.17685 3.88 28.26 2025 2025 MS2 25/100 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 461 3.49 0.00 1 3 100 2 670.84064 1340.67400 3.52 17.83 1176 1176 MS2 19/22 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 600 3.49 0.00 0 5 100 2 590.30597 1179.60466 3.55 30.04 2256 2256 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 275 3.49 0.00 0 4 25 2 829.40265 1657.79802 3.06 26.00 2107 2107 MS2 21/32 Linfeng_122411_rIgG_10.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.49 0.00 0 11 100 2 829.40295 1657.79863 3.43 33.42 3356 3356 MS2 19/32 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 536 3.49 0.00 0 3 100 2 590.30524 1179.60320 2.31 27.03 2260 2260 MS2 17/18 Linfeng_20120130_CHD1_8.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 235 3.49 0.00 1 32 100 3 667.97107 2001.89865 4.66 39.76 4536 4536 MS2 27/60 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 581 3.48 0.00 0 11 100 2 590.30634 1179.60539 4.17 26.85 1769 1769 MS2 16/18 Linfeng_20120130_CHD1_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.48 0.00 0 3 14 2 679.34961 1357.69194 -2.88 33.44 3993 3993 MS2 20/22 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 555 3.48 0.00 0 12 100 2 590.30536 1179.60344 2.52 30.03 2128 2128 MS2 16/18 Linfeng_20120130_CHD1_6.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 3.48 0.00 1 3 100 2 670.84015 1340.67302 2.79 18.36 1153 1153 MS2 17/22 Linfeng_20120130_CHD1_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 595 3.48 0.00 0 9 100 2 590.30615 1179.60503 3.86 27.88 2215 2215 MS2 17/18 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 584 3.47 0.00 0 9 100 2 590.30646 1179.60564 4.38 27.42 2400 2400 MS2 17/18 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 587 3.47 0.00 0 18 100 2 590.30640 1179.60552 4.28 30.52 2335 2335 MS2 16/18 Linfeng_20120130_CHD1_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 3.47 0.00 0 11 25 2 738.37842 1475.74956 0.42 35.88 3719 3719 MS2 20/22 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 305 3.47 0.00 0 1 25 2 858.92706 1716.84685 -2.52 31.10 3547 3547 MS2 21/28 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 542 3.47 0.00 0 18 100 2 651.86346 1302.71965 3.42 11.17 786 786 MS2 19/22 Linfeng_20120130_CHD1_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.46 0.00 0 38 100 2 590.30670 1179.60613 4.79 28.40 2247 2247 MS2 17/18 Linfeng_20120130_CHD1_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.46 0.00 0 8 25 2 858.93115 1716.85503 2.24 29.69 2761 2761 MS2 22/28 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 604 3.46 0.00 0 3 100 2 590.30634 1179.60539 4.17 27.30 2079 2079 MS2 17/18 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 265 3.46 0.00 0 31 25 2 829.40118 1657.79509 1.30 27.66 2409 2409 MS2 20/32 Linfeng_122411_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 34 3.46 0.00 0 23 25 2 883.37360 1765.73992 2.89 27.48 2126 2126 MS2 21/38 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 579 3.46 0.00 0 11 100 2 590.30621 1179.60515 3.97 28.02 2239 2239 MS2 17/18 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 503 3.45 0.00 0 13 100 2 651.86346 1302.71965 3.42 0.63 51 51 MS2 19/22 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 530 3.45 0.00 0 56 100 2 590.30682 1179.60637 5.00 28.44 2253 2253 MS2 17/18 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.45 0.00 1 3 25 3 647.99976 1941.98471 -1.54 41.81 4953 4953 MS2 27/64 Linfeng_091311_rIgG_3.raw High LDSELKNMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M11(Oxidation) CID 1.0000 0.0000 1 1 212 3.45 0.00 1 76 100 3 667.96942 2001.89371 2.20 39.15 4913 4913 MS2 23/60 Linfeng_20120130_CHD1_5.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 277 3.45 0.00 0 19 100 2 546.75507 1092.50286 -0.05 3.13 185 185 MS2 22/26 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 671 3.45 0.00 1 16 100 3 615.65387 1844.94706 0.49 31.15 3031 3031 MS2 27/60 Linfeng_20120130_CHD1_10.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 635 3.45 0.00 1 18 100 3 615.65546 1844.95182 3.07 31.24 2975 2975 MS2 25/60 Linfeng_20120130_CHD1_8.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 3.44 0.00 0 1 25 2 858.92603 1716.84477 -3.73 30.83 3646 3646 MS2 20/28 Linfeng_091311_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 293 3.44 0.00 2 9 20 4 626.06592 2501.24184 -4.03 30.62 3244 3244 MS2 40/126 Linfeng_091311_rIgG_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 237 3.44 0.00 0 14 100 3 861.06091 2581.16819 2.47 26.59 2198 2198 MS2 26/100 Linfeng_20120130_CHD1_8.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 160 3.44 0.00 1 17 15 3 563.32813 1687.96982 -0.22 3.37 316 316 MS2 30/64 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 568 3.44 0.00 0 17 100 2 590.30554 1179.60381 2.83 30.55 2224 2224 MS2 17/18 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 632 3.43 0.00 0 10 100 2 590.30573 1179.60417 3.14 26.62 1976 1976 MS2 17/18 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 282 3.42 0.00 0 29 25 2 639.36078 1277.71428 3.33 38.29 3974 3974 MS2 18/20 Linfeng_122411_rIgG_4.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 592 3.42 0.00 0 3 100 2 679.35242 1357.69756 1.26 37.93 3188 3188 MS2 17/22 Linfeng_20120130_CHD1_7.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 645 3.42 0.00 1 38 100 3 615.65625 1844.95420 4.36 31.12 2432 2432 MS2 23/60 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 3.42 0.00 0 19 25 2 651.86121 1302.71514 -0.04 43.58 4893 4893 MS2 19/22 Linfeng_122411_rIgG_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 522 3.42 0.00 1 33 100 2 800.42285 1599.83843 2.92 43.32 4100 4100 MS2 22/26 Linfeng_20120130_CHD1_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.42 0.00 0 13 100 2 590.30664 1179.60600 4.69 26.76 2305 2305 MS2 17/18 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 529 3.42 0.00 0 8 100 2 590.30524 1179.60320 2.31 30.52 2321 2321 MS2 17/18 Linfeng_20120130_CHD1_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 490 3.42 0.00 0 33 100 2 692.35150 1383.69573 3.88 44.90 5685 5685 MS2 19/22 Linfeng_20120130_CHD1_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 501 3.41 0.00 1 12 100 2 697.37177 1393.73625 2.89 26.93 2015 2015 MS2 15/22 Linfeng_20120130_CHD1_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 490 3.41 0.00 0 4 7 2 633.32367 1265.64006 2.21 29.74 2568 2568 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 511 3.41 0.00 0 8 100 2 858.93292 1716.85857 4.30 33.85 2853 2853 MS2 17/28 Linfeng_20120130_CHD1_9.raw High NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 3.41 0.00 2 12 25 4 546.78815 2184.13076 2.36 40.88 4344 4344 MS2 45/108 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 541 3.41 0.00 0 12 100 2 651.86188 1302.71648 0.99 44.59 6201 6201 MS2 19/22 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 601 3.41 0.00 0 9 100 3 572.95612 1716.85379 1.52 34.12 2594 2594 MS2 26/56 Linfeng_20120130_CHD1_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 592 3.41 0.00 0 4 100 2 590.30573 1179.60417 3.14 30.29 2296 2296 MS2 17/18 Linfeng_20120130_CHD1_9.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.40 0.00 1 6 25 3 648.00244 1941.99277 2.61 41.06 4366 4366 MS2 26/64 Linfeng_122411_rIgG_6.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 3.40 0.00 0 18 4 2 738.37738 1475.74748 -0.99 35.64 3809 3809 MS2 20/22 Linfeng_122411_rIgG_5.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 548 3.40 0.00 0 19 13 2 738.37921 1475.75115 1.49 44.15 6094 6094 MS2 18/22 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 3.40 0.00 0 1 25 2 858.93115 1716.85503 2.24 29.62 2866 2866 MS2 23/28 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 574 3.40 0.00 0 4 100 2 590.30597 1179.60466 3.55 27.62 1862 1862 MS2 17/18 Linfeng_20120130_CHD1_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 3.40 0.00 0 3 31 2 651.86133 1302.71538 0.14 0.58 46 46 MS2 19/22 Linfeng_20120130_CHD1_7.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.39 0.00 1 17 25 3 783.74500 2349.22043 0.82 52.84 6287 6287 MS2 36/80 Linfeng_091311_rIgG_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 238 3.39 0.00 1 3 22 2 670.83685 1340.66643 -2.13 18.95 1898 1898 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 483 3.39 0.00 0 12 100 2 692.35150 1383.69573 3.88 46.41 5721 5721 MS2 16/22 Linfeng_20120130_CHD1_2.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 3.39 0.00 1 7 23 3 647.99939 1941.98362 -2.11 41.70 5002 5002 MS2 29/64 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 3.39 0.00 0 5 25 2 679.35254 1357.69780 1.44 32.28 3068 3068 MS2 20/22 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 625 3.39 0.00 0 12 100 2 590.30560 1179.60393 2.93 29.71 2463 2463 MS2 17/18 Linfeng_20120130_CHD1_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.39 0.00 0 4 25 3 461.90234 1383.69248 1.53 34.78 3015 3015 MS2 25/44 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.39 0.00 0 10 25 3 572.95593 1716.85324 1.20 29.29 2618 2618 MS2 28/56 Linfeng_122411_rIgG_8.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 361 3.39 0.00 0 20 2 2 738.37372 1475.74016 -5.95 36.74 4361 4361 MS2 20/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 602 3.38 0.00 0 21 100 2 590.30560 1179.60393 2.93 30.55 2338 2338 MS2 17/18 Linfeng_20120130_CHD1_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 456 3.38 0.00 0 8 100 2 692.35181 1383.69634 4.32 46.23 6233 6233 MS2 19/22 Linfeng_20120130_CHD1_8.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 3.38 0.00 0 10 25 2 997.49518 1993.98308 3.19 43.47 4624 4624 MS2 22/30 Linfeng_122411_rIgG_4.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 3.38 0.00 0 20 25 3 572.95355 1716.84610 -2.96 30.72 3524 3524 MS2 29/56 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 3.38 0.00 0 24 25 3 422.55148 1265.63990 2.08 26.84 2355 2355 MS2 24/40 Linfeng_122411_rIgG_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 3.37 0.00 0 24 25 2 679.35248 1357.69768 1.35 32.25 3209 3209 MS2 20/22 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 616 3.37 0.00 0 11 100 2 590.30579 1179.60430 3.24 30.41 2206 2206 MS2 17/18 Linfeng_20120130_CHD1_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 613 3.37 0.00 0 17 100 2 679.35461 1357.70195 4.49 10.84 722 722 MS2 18/22 Linfeng_20120130_CHD1_9.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.37 0.00 0 12 3 2 738.37482 1475.74236 -4.46 36.78 4310 4310 MS2 20/22 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 3.37 0.00 0 6 100 2 590.30591 1179.60454 3.45 30.44 2314 2314 MS2 16/18 Linfeng_20120130_CHD1_9.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 630 3.37 0.00 1 24 100 3 615.65558 1844.95218 3.27 31.32 2466 2466 MS2 27/60 Linfeng_20120130_CHD1_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 592 3.37 0.00 0 48 100 3 665.32935 1993.97348 -1.62 48.65 6599 6599 MS2 26/60 Linfeng_20120130_CHD1_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 3.36 0.00 0 18 100 2 692.35211 1383.69695 4.76 46.39 6198 6198 MS2 16/22 Linfeng_20120130_CHD1_10.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.36 0.00 0 15 6 2 738.37787 1475.74846 -0.33 35.62 3494 3494 MS2 20/22 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 3.36 0.00 0 11 3 2 738.37891 1475.75054 1.08 35.69 3529 3529 MS2 20/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 573 3.36 0.00 0 38 100 2 590.30548 1179.60369 2.72 29.09 2579 2579 MS2 16/18 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 540 3.36 0.00 0 11 100 2 590.30554 1179.60381 2.83 30.63 2337 2337 MS2 15/18 Linfeng_20120130_CHD1_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 577 3.36 0.00 0 11 100 2 590.30585 1179.60442 3.35 29.85 2230 2230 MS2 17/18 Linfeng_20120130_CHD1_2.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 578 3.36 0.00 1 22 100 3 508.60239 1523.79261 2.56 41.21 4921 4921 MS2 20/44 Linfeng_20120130_CHD1_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 149 3.35 0.00 1 4 100 2 1009.44879 2017.89031 3.01 25.90 1861 1861 MS2 16/30 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 308 3.35 0.00 0 14 25 2 639.36005 1277.71282 2.18 39.42 4001 4001 MS2 18/20 Linfeng_122411_rIgG_2.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 3.35 0.00 1 13 25 3 648.00256 1941.99314 2.79 40.99 4064 4064 MS2 26/64 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 3.35 0.00 0 28 100 2 679.35522 1357.70317 5.39 0.79 86 86 MS2 17/22 Linfeng_20120130_CHD1_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 537 3.34 0.00 0 22 100 2 651.86426 1302.72124 4.64 11.02 967 967 MS2 19/22 Linfeng_20120130_CHD1_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 597 3.34 0.00 0 15 100 3 572.95740 1716.85764 3.76 34.10 3682 3682 MS2 28/56 Linfeng_20120130_CHD1_10.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.33 0.00 0 0 100 2 829.40112 1657.79497 1.22 33.05 2469 2469 MS2 19/32 Linfeng_20120130_CHD1_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 604 3.33 0.00 0 42 100 2 590.30573 1179.60417 3.14 29.28 2617 2617 MS2 15/18 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 3.33 0.00 0 2 25 2 858.93097 1716.85466 2.03 28.44 2430 2430 MS2 22/28 Linfeng_122411_rIgG_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 3.33 0.00 1 6 25 3 647.99963 1941.98435 -1.73 41.68 4742 4742 MS2 28/64 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 3.33 0.00 0 39 25 2 651.85962 1302.71196 -2.48 44.82 5454 5454 MS2 19/22 Linfeng_091311_rIgG_10.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 3.33 0.00 0 10 16 2 738.37885 1475.75041 1.00 35.70 3647 3647 MS2 20/22 Linfeng_122411_rIgG_4.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.33 0.00 1 10 5 2 697.36945 1393.73161 -0.44 3.86 423 423 MS2 18/22 Linfeng_122411_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 282 3.33 0.00 0 16 25 2 639.36029 1277.71330 2.56 38.30 3457 3457 MS2 18/20 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 585 3.33 0.00 0 16 100 2 590.30585 1179.60442 3.35 28.89 2536 2536 MS2 17/18 Linfeng_20120130_CHD1_5.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 3.33 0.00 0 20 25 2 738.37909 1475.75090 1.33 35.69 3386 3386 MS2 20/22 Linfeng_122411_rIgG_10.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 3.33 0.00 2 24 100 3 401.23621 1201.69406 3.41 16.54 1088 1088 MS2 21/36 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 530 3.32 0.00 0 42 100 2 590.30670 1179.60613 4.79 28.27 2225 2225 MS2 17/18 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 598 3.32 0.00 0 42 100 2 590.30560 1179.60393 2.93 29.36 2632 2632 MS2 17/18 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 3.32 0.00 0 28 25 3 572.95593 1716.85324 1.20 29.91 2960 2960 MS2 28/56 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 3.31 0.00 0 10 25 2 651.86359 1302.71990 3.61 43.59 4521 4521 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.31 0.00 0 4 9 2 692.34656 1383.68584 -3.27 37.01 4321 4321 MS2 19/22 Linfeng_091311_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 3.31 0.00 0 0 100 2 679.35352 1357.69975 2.87 1.71 320 320 MS2 20/22 Linfeng_20120130_CHD1_8.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 3.31 0.00 0 13 100 2 546.75580 1092.50432 1.29 3.10 437 437 MS2 21/26 Linfeng_20120130_CHD1_10.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.31 0.00 0 22 9 2 738.37610 1475.74492 -2.72 36.93 4271 4271 MS2 20/22 Linfeng_091311_rIgG_5.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 259 3.30 0.00 0 13 25 2 829.40125 1657.79521 1.37 29.24 2611 2611 MS2 20/32 Linfeng_122411_rIgG_8.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 120 3.30 0.00 0 16 25 3 855.72980 2565.17484 3.09 25.93 2376 2376 MS2 26/100 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 600 3.30 0.00 0 18 100 2 590.30640 1179.60552 4.28 27.70 2140 2140 MS2 17/18 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 514 3.30 0.00 0 30 100 2 651.86395 1302.72063 4.17 45.22 5926 5926 MS2 18/22 Linfeng_20120130_CHD1_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 299 3.29 0.00 0 5 7 2 639.35858 1277.70989 -0.11 38.42 4193 4193 MS2 18/20 Linfeng_122411_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 376 3.29 0.00 0 32 25 2 679.34912 1357.69097 -3.60 33.48 3822 3822 MS2 20/22 Linfeng_091311_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 3.29 0.00 0 4 2 2 858.93048 1716.85369 1.46 3.10 276 276 MS2 22/28 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 568 3.29 0.00 0 10 100 2 633.32532 1265.64336 4.82 29.88 2135 2135 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 372 3.29 0.00 1 20 25 3 508.60205 1523.79160 1.90 29.83 2893 2893 MS2 23/44 Linfeng_122411_rIgG_4.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 255 3.29 0.00 1 2 2 2 670.83582 1340.66435 -3.68 1.84 232 232 MS2 19/22 Linfeng_091311_rIgG_1.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 3.29 0.00 0 2 12 2 858.92706 1716.84685 -2.52 31.00 3547 3547 MS2 21/28 Linfeng_091311_rIgG_6.raw High LDSELKNmQDMVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation) CID 1.0000 0.0000 1 1 234 3.29 0.00 1 47 100 3 667.97015 2001.89591 3.29 31.50 3021 3021 MS2 24/60 Linfeng_20120130_CHD1_8.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 3.29 0.00 1 8 25 3 615.65179 1844.94083 -2.88 27.26 3026 3026 MS2 27/60 Linfeng_091311_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 314 3.29 0.00 0 8 25 3 461.90173 1383.69065 0.21 35.93 3560 3560 MS2 24/44 Linfeng_122411_rIgG_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 3.28 0.00 0 4 25 2 858.93134 1716.85539 2.45 30.05 2421 2421 MS2 18/28 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 3.28 0.00 0 30 25 3 572.95630 1716.85434 1.84 28.60 2369 2369 MS2 27/56 Linfeng_122411_rIgG_9.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 299 3.28 0.00 0 15 17 2 639.35724 1277.70720 -2.22 39.51 4722 4722 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 457 3.28 0.00 0 54 100 2 692.35181 1383.69634 4.32 47.24 6228 6228 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 306 3.28 0.00 0 29 25 2 639.35999 1277.71269 2.08 38.35 3867 3867 MS2 18/20 Linfeng_122411_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 498 3.27 0.00 1 2 100 2 697.37177 1393.73625 2.89 22.82 1441 1441 MS2 17/22 Linfeng_20120130_CHD1_3.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.27 0.00 2 2 25 4 626.06976 2501.25722 2.12 29.76 2941 2941 MS2 42/126 Linfeng_122411_rIgG_6.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 82 3.27 0.00 1 10 25 3 693.97607 2079.91367 -0.55 2.68 238 238 MS2 34/108 Linfeng_091311_rIgG_3.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 3.27 0.00 0 4 7 2 858.92670 1716.84612 -2.95 30.80 3268 3268 MS2 22/28 Linfeng_091311_rIgG_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 3.27 0.00 0 6 25 2 679.35260 1357.69792 1.53 32.29 3101 3101 MS2 20/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 295 3.27 0.00 0 20 25 2 639.35999 1277.71269 2.08 40.55 4144 4144 MS2 18/20 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 526 3.27 0.00 0 3 62 2 633.32520 1265.64311 4.62 30.33 2571 2571 MS2 18/20 Linfeng_20120130_CHD1_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 268 3.27 0.00 0 13 100 3 861.06232 2581.17240 4.10 26.63 2283 2283 MS2 28/100 Linfeng_20120130_CHD1_10.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 370 3.27 0.00 0 23 15 2 738.37927 1475.75127 1.58 34.35 2962 2962 MS2 19/22 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.27 0.00 0 5 1 2 692.34650 1383.68572 -3.36 36.85 4088 4088 MS2 19/22 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 3.26 0.00 0 23 100 2 590.30524 1179.60320 2.31 29.81 2717 2717 MS2 17/18 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 495 3.26 0.00 0 11 58 2 633.32367 1265.64006 2.21 29.64 2677 2677 MS2 16/20 Linfeng_20120130_CHD1_5.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 188 3.26 0.00 1 28 16 3 563.32611 1687.96378 -3.80 32.80 3781 3781 MS2 29/64 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 3.26 0.00 0 39 25 2 651.86285 1302.71843 2.49 43.48 4625 4625 MS2 19/22 Linfeng_122411_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 638 3.25 0.00 1 26 100 3 615.65594 1844.95328 3.86 31.46 2784 2784 MS2 22/60 Linfeng_20120130_CHD1_1.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 310 3.25 0.00 0 13 25 2 997.49017 1993.97307 -1.83 44.66 5279 5279 MS2 22/30 Linfeng_091311_rIgG_6.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 447 3.25 0.00 1 15 25 3 533.94946 1599.83384 0.05 33.96 3481 3481 MS2 22/52 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 3.25 0.00 0 35 100 2 590.30597 1179.60466 3.55 28.76 2510 2510 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 195 3.25 0.00 1 20 100 3 673.30280 2017.89383 4.76 25.68 1685 1685 MS2 24/60 Linfeng_20120130_CHD1_2.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 497 3.25 0.00 1 0 100 2 670.83966 1340.67204 2.06 17.94 1210 1210 MS2 19/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 155 3.25 0.00 1 21 25 3 563.32861 1687.97129 0.65 31.37 2824 2824 MS2 28/64 Linfeng_122411_rIgG_10.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 340 3.25 0.00 1 1 25 2 819.93530 1638.86333 2.09 37.54 3928 3928 MS2 20/26 Linfeng_122411_rIgG_6.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 3.24 0.00 1 1 25 3 648.00262 1941.99332 2.89 40.86 4295 4295 MS2 29/64 Linfeng_122411_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 676 3.24 0.00 1 33 100 3 615.65497 1844.95035 2.28 30.80 2894 2894 MS2 24/60 Linfeng_20120130_CHD1_8.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 3.24 0.00 1 3 12 3 648.00195 1941.99131 1.85 41.04 4205 4205 MS2 31/64 Linfeng_122411_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 3.24 0.00 1 11 4 2 697.36914 1393.73100 -0.88 3.68 374 374 MS2 18/22 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 515 3.24 0.00 0 6 47 2 633.32489 1265.64250 4.14 29.32 2396 2396 MS2 18/20 Linfeng_20120130_CHD1_1.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 3.23 0.00 0 12 100 3 861.06012 2581.16581 1.54 26.53 2187 2187 MS2 26/100 Linfeng_20120130_CHD1_8.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.23 0.00 0 24 100 2 546.75671 1092.50615 2.97 12.64 1150 1150 MS2 19/26 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 611 3.23 0.00 0 27 100 2 590.30579 1179.60430 3.24 27.67 2356 2356 MS2 16/18 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 562 3.23 0.00 0 55 100 2 590.30615 1179.60503 3.86 28.52 2265 2265 MS2 16/18 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 301 3.23 0.00 0 31 25 2 997.49017 1993.97307 -1.83 44.26 5259 5259 MS2 20/30 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 456 3.23 0.00 0 5 9 2 651.86267 1302.71807 2.21 43.76 4142 4142 MS2 19/22 Linfeng_122411_rIgG_7.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 3.23 0.00 1 3 15 3 648.00238 1941.99259 2.51 41.00 3793 3793 MS2 29/64 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 334 3.23 0.00 0 3 25 2 692.34967 1383.69206 1.23 34.59 2991 2991 MS2 19/22 Linfeng_122411_rIgG_7.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 529 3.23 0.00 1 6 100 2 697.37128 1393.73528 2.19 22.55 1476 1476 MS2 15/22 Linfeng_20120130_CHD1_4.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 70 3.22 0.00 1 0 25 3 693.97369 2079.90653 -3.99 12.80 1072 1072 MS2 33/108 Linfeng_091311_rIgG_6.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 3.22 0.00 2 25 100 3 401.23621 1201.69406 3.41 16.78 1370 1370 MS2 17/36 Linfeng_20120130_CHD1_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 571 3.22 0.00 0 30 100 2 590.30536 1179.60344 2.52 27.80 2461 2461 MS2 16/18 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 328 3.21 0.00 0 3 15 2 692.34943 1383.69158 0.88 35.89 3411 3411 MS2 19/22 Linfeng_122411_rIgG_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 530 3.21 0.00 0 8 100 2 633.32428 1265.64128 3.18 30.05 2131 2131 MS2 18/20 Linfeng_20120130_CHD1_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 3.21 0.00 0 5 2 2 651.86237 1302.71745 1.74 43.78 4551 4551 MS2 19/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 3.21 0.00 0 4 25 2 651.86322 1302.71916 3.05 43.70 4413 4413 MS2 19/22 Linfeng_122411_rIgG_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 594 3.21 0.00 0 45 100 2 633.32526 1265.64324 4.72 31.00 2692 2692 MS2 16/20 Linfeng_20120130_CHD1_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 314 3.21 0.00 0 4 25 2 692.35059 1383.69390 2.55 35.95 3317 3317 MS2 19/22 Linfeng_122411_rIgG_9.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 248 3.20 0.00 0 27 25 3 553.26776 1657.78873 -2.54 30.40 3452 3452 MS2 34/64 Linfeng_091311_rIgG_7.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.20 0.00 1 11 25 3 762.71259 2286.12320 -0.75 31.81 3283 3283 MS2 28/76 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 572 3.20 0.00 0 20 100 3 572.95679 1716.85581 2.69 34.05 2884 2884 MS2 23/56 Linfeng_20120130_CHD1_9.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 3.20 0.00 0 16 25 4 828.83612 3312.32265 4.35 21.29 1647 1647 MS2 46/228 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 571 3.20 0.00 0 9 100 2 738.39703 1475.78679 1.00 25.84 2038 2038 MS2 17/22 Linfeng_20120130_CHD1_8.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 232 3.20 0.00 0 10 25 2 563.27313 1125.53899 -2.93 21.18 2212 2212 MS2 16/18 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 278 3.20 0.00 0 21 25 3 553.27026 1657.79624 1.99 25.19 1935 1935 MS2 23/64 Linfeng_122411_rIgG_9.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 271 3.19 0.00 1 6 25 2 670.83734 1340.66741 -1.40 18.92 1905 1905 MS2 19/22 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 632 3.19 0.00 0 34 100 2 590.30573 1179.60417 3.14 30.71 2879 2879 MS2 16/18 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 534 3.19 0.00 0 11 40 2 633.32428 1265.64128 3.18 29.55 2742 2742 MS2 17/20 Linfeng_20120130_CHD1_10.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 3.19 0.00 1 20 100 3 508.60284 1523.79398 3.46 40.58 4325 4325 MS2 20/44 Linfeng_20120130_CHD1_2.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 440 3.19 0.00 1 17 25 3 648.00012 1941.98581 -0.98 41.82 4949 4949 MS2 27/64 Linfeng_091311_rIgG_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 156 3.19 0.00 1 2 100 2 1009.45013 2017.89299 4.34 25.53 2116 2116 MS2 17/30 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 577 3.18 0.00 0 25 100 2 590.30621 1179.60515 3.97 30.68 2361 2361 MS2 16/18 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 545 3.18 0.00 0 29 100 2 590.30542 1179.60356 2.62 29.51 2659 2659 MS2 17/18 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 610 3.18 0.00 0 15 100 2 590.30579 1179.60430 3.24 28.11 2382 2382 MS2 17/18 Linfeng_20120130_CHD1_5.raw High NKLNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 430 3.18 0.00 1 10 25 3 533.94763 1599.82834 -3.38 34.62 3997 3997 MS2 30/52 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 305 3.18 0.00 0 23 25 2 639.36115 1277.71501 3.90 47.56 5036 5036 MS2 18/20 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 513 3.18 0.00 0 21 100 2 651.86346 1302.71965 3.42 11.65 1065 1065 MS2 18/22 Linfeng_20120130_CHD1_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 3.17 0.00 0 41 25 3 422.55157 1265.64017 2.30 26.71 2363 2363 MS2 23/40 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 558 3.17 0.00 0 27 100 2 590.30542 1179.60356 2.62 29.14 2590 2590 MS2 17/18 Linfeng_20120130_CHD1_5.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.17 0.00 0 12 25 2 738.37659 1475.74590 -2.06 37.02 4323 4323 MS2 20/22 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 3.17 0.00 0 7 9 2 692.34625 1383.68523 -3.71 36.75 4314 4314 MS2 19/22 Linfeng_091311_rIgG_3.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 200 3.17 0.00 0 8 10 2 563.27423 1125.54119 -0.97 4.11 440 440 MS2 16/18 Linfeng_122411_rIgG_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 593 3.16 0.00 0 5 100 2 679.35492 1357.70256 4.94 0.93 126 126 MS2 20/22 Linfeng_20120130_CHD1_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.16 0.00 0 7 18 3 453.23596 1357.69333 -1.86 32.03 2913 2913 MS2 31/44 Linfeng_122411_rIgG_10.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 3.16 0.00 2 12 25 4 626.06940 2501.25576 1.54 29.47 2642 2642 MS2 41/126 Linfeng_122411_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 294 3.16 0.00 0 4 2 2 692.34888 1383.69048 0.08 35.90 3556 3556 MS2 19/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 557 3.16 0.00 0 25 100 2 651.86414 1302.72099 4.45 45.18 5769 5769 MS2 18/22 Linfeng_20120130_CHD1_4.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 58 3.16 0.00 0 31 100 2 650.76996 1300.53264 2.25 33.22 2467 2467 MS2 15/18 Linfeng_20120130_CHD1_7.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 3.16 0.00 0 16 13 2 738.37634 1475.74541 -2.39 36.75 4315 4315 MS2 19/22 Linfeng_091311_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 510 3.16 0.00 0 11 90 2 633.32507 1265.64287 4.43 29.62 2197 2197 MS2 18/20 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 3.16 0.00 0 22 100 2 590.30609 1179.60491 3.76 27.61 2428 2428 MS2 16/18 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVKAQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 365 3.15 0.00 1 20 25 3 783.74719 2349.22702 3.63 51.75 5458 5458 MS2 26/80 Linfeng_122411_rIgG_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 293 3.15 0.00 0 3 20 2 692.34918 1383.69109 0.52 36.05 3489 3489 MS2 19/22 Linfeng_122411_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 3.14 0.00 0 3 25 2 590.30487 1179.60246 1.69 27.02 2577 2577 MS2 17/18 Linfeng_122411_rIgG_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 212 3.14 0.00 0 2 25 2 563.27252 1125.53777 -4.01 21.44 2217 2217 MS2 16/18 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 530 3.14 0.00 0 23 100 2 651.86377 1302.72026 3.89 45.20 5434 5434 MS2 19/22 Linfeng_20120130_CHD1_2.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 239 3.14 0.00 0 7 100 3 861.06085 2581.16800 2.40 28.13 2260 2260 MS2 25/100 Linfeng_20120130_CHD1_4.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 349 3.14 0.00 2 4 17 4 626.06927 2501.25527 1.34 29.71 2733 2733 MS2 42/126 Linfeng_122411_rIgG_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 14 25 2 670.83673 1340.66619 -2.31 18.90 1929 1929 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 626 3.14 0.00 0 32 100 2 590.30560 1179.60393 2.93 28.28 2416 2416 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 3.14 0.00 1 15 100 2 762.40179 1523.79631 4.99 40.29 4860 4860 MS2 16/22 Linfeng_20120130_CHD1_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 287 3.13 0.00 1 4 25 2 670.83783 1340.66838 -0.67 19.12 1888 1888 MS2 19/22 Linfeng_091311_rIgG_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 337 3.13 0.00 0 7 25 2 692.34961 1383.69194 1.14 35.80 3659 3659 MS2 19/22 Linfeng_122411_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 541 3.13 0.00 0 30 100 2 651.86365 1302.72002 3.71 44.64 5624 5624 MS2 18/22 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 249 3.13 0.00 0 28 25 3 553.26770 1657.78855 -2.65 30.40 3468 3468 MS2 32/64 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 306 3.13 0.00 0 9 25 2 639.36017 1277.71306 2.37 38.56 4056 4056 MS2 18/20 Linfeng_122411_rIgG_6.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 173 3.13 0.00 1 12 100 3 673.30157 2017.89017 2.94 25.60 1813 1813 MS2 29/60 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 368 3.13 0.00 1 40 25 3 777.06464 2329.17936 2.15 36.28 3604 3604 MS2 27/80 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 3.13 0.00 0 12 12 2 692.34540 1383.68352 -4.94 36.74 4362 4362 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 560 3.12 0.00 0 10 100 2 590.30505 1179.60283 2.00 30.06 2100 2100 MS2 17/18 Linfeng_20120130_CHD1_7.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 561 3.12 0.00 1 6 100 2 697.37140 1393.73552 2.36 22.94 1583 1583 MS2 15/22 Linfeng_20120130_CHD1_9.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 350 3.12 0.00 1 24 20 3 508.60065 1523.78739 -0.86 29.47 2960 2960 MS2 24/44 Linfeng_122411_rIgG_5.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 560 3.12 0.00 1 3 2 3 434.90494 1302.70026 -0.77 3.57 360 360 MS2 25/40 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 3.12 0.00 0 35 25 2 651.86359 1302.71990 3.61 43.71 4295 4295 MS2 19/22 Linfeng_122411_rIgG_9.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 3.12 0.00 0 26 25 3 589.25012 1765.73581 0.57 25.47 2414 2414 MS2 33/76 Linfeng_122411_rIgG_5.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 3.12 0.00 0 70 100 3 861.06171 2581.17057 3.39 26.72 1753 1753 MS2 28/100 Linfeng_20120130_CHD1_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 3.12 0.00 1 11 25 2 670.83728 1340.66728 -1.49 19.23 1922 1922 MS2 19/22 Linfeng_091311_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 3.12 0.00 0 3 5 2 590.30194 1179.59661 -3.28 28.30 3241 3241 MS2 17/18 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 3.12 0.00 0 6 25 3 461.90256 1383.69312 1.99 35.97 3540 3540 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.11 0.00 0 23 100 3 855.72858 2565.17118 1.67 27.99 2359 2359 MS2 29/100 Linfeng_20120130_CHD1_5.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 212 3.11 0.00 0 4 24 2 563.27301 1125.53874 -3.14 21.13 2241 2241 MS2 16/18 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.11 0.00 0 7 16 2 692.34625 1383.68523 -3.71 37.09 4316 4316 MS2 19/22 Linfeng_091311_rIgG_9.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 202 3.11 0.00 0 4 22 2 563.27271 1125.53813 -3.69 21.46 2296 2296 MS2 16/18 Linfeng_091311_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 549 3.11 0.00 0 33 100 2 590.30652 1179.60576 4.48 29.95 2144 2144 MS2 16/18 Linfeng_20120130_CHD1_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 3.11 0.00 0 2 3 2 651.85986 1302.71245 -2.10 44.52 5111 5111 MS2 19/22 Linfeng_091311_rIgG_1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 132 3.10 0.00 1 4 25 2 844.49078 1687.97429 2.43 31.84 3212 3212 MS2 20/32 Linfeng_122411_rIgG_6.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 268 3.10 0.00 1 49 25 3 447.56000 1340.66544 -2.87 18.91 1892 1892 MS2 23/44 Linfeng_091311_rIgG_4.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 538 3.10 0.00 1 33 25 3 434.90579 1302.70282 1.20 22.67 1999 1999 MS2 24/40 Linfeng_122411_rIgG_6.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 294 3.10 0.00 0 2 25 2 858.92731 1716.84734 -2.24 30.67 3524 3524 MS2 21/28 Linfeng_091311_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 3.10 0.00 0 3 25 3 492.58871 1475.75159 1.80 34.27 2951 2951 MS2 27/44 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 3.10 0.00 0 8 4 2 639.35724 1277.70720 -2.22 39.64 4465 4465 MS2 18/20 Linfeng_091311_rIgG_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 330 3.10 0.00 0 5 2 2 692.34839 1383.68950 -0.62 35.82 3835 3835 MS2 19/22 Linfeng_122411_rIgG_5.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 3.10 0.00 0 10 25 2 679.35229 1357.69731 1.08 32.57 3306 3306 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 3.09 0.00 1 17 25 2 697.36823 1393.72917 -2.19 24.81 2718 2718 MS2 18/22 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.09 0.00 0 5 12 2 692.34583 1383.68437 -4.33 36.78 4311 4311 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 494 3.09 0.00 0 39 100 2 692.35144 1383.69560 3.79 47.15 6207 6207 MS2 16/22 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.08 0.00 0 18 100 3 861.06146 2581.16983 3.10 27.01 2154 2154 MS2 26/100 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 3.08 0.00 0 18 25 2 590.30518 1179.60307 2.21 27.17 2540 2540 MS2 17/18 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 3.08 0.00 0 11 3 2 590.30255 1179.59783 -2.24 4.18 451 451 MS2 17/18 Linfeng_122411_rIgG_10.raw High GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 81 3.08 0.00 1 2 25 3 693.97589 2079.91312 -0.82 2.93 274 274 MS2 36/108 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 538 3.08 0.00 0 7 100 2 633.32477 1265.64226 3.95 30.56 2916 2916 MS2 16/20 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 3.08 0.00 0 3 8 2 651.86017 1302.71306 -1.64 44.73 5314 5314 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 352 3.07 0.00 0 21 25 3 461.90118 1383.68900 -0.98 35.89 3844 3844 MS2 24/44 Linfeng_122411_rIgG_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 3.07 0.00 0 79 25 3 665.32947 1993.97385 -1.43 49.24 5884 5884 MS2 24/60 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 512 3.07 0.00 0 5 100 2 651.86328 1302.71929 3.14 45.42 4838 4838 MS2 19/22 Linfeng_20120130_CHD1_9.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 258 3.07 0.00 1 9 8 3 447.56039 1340.66663 -1.98 18.91 1904 1904 MS2 25/44 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 3.07 0.00 0 6 8 2 590.30212 1179.59697 -2.97 28.41 2945 2945 MS2 17/18 Linfeng_091311_rIgG_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 502 3.07 0.00 0 5 100 2 633.32343 1265.63957 1.83 29.99 2092 2092 MS2 17/20 Linfeng_20120130_CHD1_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 581 3.07 0.00 0 5 100 2 738.39868 1475.79009 3.23 25.86 1790 1790 MS2 15/22 Linfeng_20120130_CHD1_6.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 105 3.06 0.00 1 61 100 2 1009.44513 2017.88298 -0.62 25.82 2032 2032 MS2 17/30 Linfeng_20120130_CHD1_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 344 3.06 0.00 0 28 25 2 692.34991 1383.69255 1.58 35.87 3527 3527 MS2 19/22 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 495 3.06 0.00 0 36 100 2 651.86346 1302.71965 3.42 45.11 5967 5967 MS2 17/22 Linfeng_20120130_CHD1_8.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.06 0.00 0 3 13 3 492.58887 1475.75205 2.11 35.70 3531 3531 MS2 30/44 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 484 3.06 0.00 0 23 100 2 692.35132 1383.69536 3.61 45.21 5991 5991 MS2 17/22 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.06 0.00 0 6 100 3 855.73029 2565.17630 3.66 28.21 2441 2441 MS2 25/100 Linfeng_20120130_CHD1_8.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.05 0.00 2 17 100 3 401.23575 1201.69269 2.26 16.46 1104 1104 MS2 19/36 Linfeng_20120130_CHD1_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 563 3.05 0.00 0 24 100 2 651.86053 1302.71379 -1.07 48.66 6601 6601 MS2 18/22 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 401 3.05 0.00 0 27 25 2 651.86371 1302.72014 3.80 53.31 5290 5290 MS2 18/22 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 486 3.05 0.00 0 39 100 2 692.35175 1383.69621 4.23 45.60 4871 4871 MS2 16/22 Linfeng_20120130_CHD1_9.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 3.05 0.00 0 18 25 4 499.25058 1993.98049 1.89 43.79 4146 4146 MS2 36/90 Linfeng_122411_rIgG_7.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 257 3.05 0.00 1 57 25 3 447.56049 1340.66690 -1.77 19.12 1938 1938 MS2 23/44 Linfeng_091311_rIgG_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 261 3.05 0.00 0 11 100 3 861.06146 2581.16983 3.10 26.55 1964 1964 MS2 24/100 Linfeng_20120130_CHD1_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 3.04 0.00 0 19 100 3 855.72925 2565.17319 2.45 28.69 2519 2519 MS2 29/100 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 408 3.04 0.00 0 12 25 2 651.86383 1302.72038 3.99 43.82 4469 4469 MS2 19/22 Linfeng_122411_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 628 3.04 0.00 0 36 100 2 590.30560 1179.60393 2.93 29.21 2605 2605 MS2 15/18 Linfeng_20120130_CHD1_5.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 131 3.04 0.00 1 0 100 2 1009.44855 2017.88982 2.77 25.37 1951 1951 MS2 16/30 Linfeng_20120130_CHD1_8.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 345 3.04 0.00 2 22 25 4 626.06885 2501.25356 0.66 28.56 2446 2446 MS2 37/126 Linfeng_122411_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 614 3.04 0.00 0 33 100 2 590.30566 1179.60405 3.04 28.84 2527 2527 MS2 17/18 Linfeng_20120130_CHD1_5.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 500 3.04 0.00 1 7 9 3 434.90405 1302.69760 -2.81 3.92 434 434 MS2 23/40 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 211 3.03 0.00 0 24 25 2 563.27222 1125.53716 -4.55 21.47 2232 2232 MS2 16/18 Linfeng_091311_rIgG_7.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 250 3.03 0.00 0 4 4 2 563.27478 1125.54228 0.00 3.24 327 327 MS2 16/18 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 3.03 0.00 0 13 15 2 590.30402 1179.60076 0.24 27.14 2638 2638 MS2 17/18 Linfeng_122411_rIgG_5.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 213 3.03 0.00 0 8 25 2 563.27313 1125.53899 -2.93 21.40 2252 2252 MS2 16/18 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 3.03 0.00 0 55 25 2 651.86401 1302.72075 4.27 54.30 5577 5577 MS2 17/22 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 315 3.02 0.00 0 18 25 2 692.34576 1383.68425 -4.42 36.99 4307 4307 MS2 19/22 Linfeng_091311_rIgG_7.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 502 3.02 0.00 1 8 2 3 434.90427 1302.69825 -2.31 3.74 385 385 MS2 24/40 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 522 3.02 0.00 0 3 100 2 633.32495 1265.64263 4.24 30.63 2354 2354 MS2 17/20 Linfeng_20120130_CHD1_2.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 280 3.02 0.00 0 50 25 3 553.26953 1657.79404 0.66 27.80 2427 2427 MS2 33/64 Linfeng_122411_rIgG_8.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 3.02 0.00 0 0 25 2 829.40271 1657.79814 3.14 29.15 2311 2311 MS2 20/32 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 312 3.01 0.00 0 18 25 2 692.34625 1383.68523 -3.71 37.05 4393 4393 MS2 18/22 Linfeng_091311_rIgG_8.raw High FSScGGGGGSFGAGGGFGSR Unambiguous 1 1 IPI00220327.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 39 3.01 0.00 0 31 25 3 589.25085 1765.73801 1.81 27.23 2433 2433 MS2 28/76 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 3.01 0.00 0 6 100 3 855.73016 2565.17594 3.52 28.24 2532 2532 MS2 22/100 Linfeng_20120130_CHD1_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 3.01 0.00 0 4 20 2 590.30267 1179.59807 -2.04 28.26 3198 3198 MS2 17/18 Linfeng_091311_rIgG_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 3.01 0.00 0 3 25 2 692.34937 1383.69145 0.79 36.09 3746 3746 MS2 19/22 Linfeng_122411_rIgG_6.raw High SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 3.01 0.00 2 18 19 4 626.06763 2501.24868 -1.29 29.49 2962 2962 MS2 39/126 Linfeng_122411_rIgG_5.raw High NmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 26 3.01 0.00 0 10 100 2 666.76587 1332.52446 3.69 18.38 1186 1186 MS2 14/18 Linfeng_20120130_CHD1_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 262 3.00 0.00 0 23 25 2 829.40320 1657.79912 3.73 24.88 1899 1899 MS2 17/32 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 557 3.00 0.00 0 19 100 2 590.30511 1179.60295 2.10 29.78 2710 2710 MS2 16/18 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 540 3.00 0.00 0 2 100 2 633.32489 1265.64250 4.14 28.31 2230 2230 MS2 15/20 Linfeng_20120130_CHD1_1.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 3.00 0.00 0 14 100 2 679.35547 1357.70366 5.75 1.26 202 202 MS2 17/22 Linfeng_20120130_CHD1_6.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 3.00 0.00 0 9 17 2 679.35046 1357.69365 -1.62 32.28 3348 3348 MS2 20/22 Linfeng_122411_rIgG_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 477 3.00 0.00 1 4 100 2 670.84015 1340.67302 2.79 18.15 1133 1133 MS2 18/22 Linfeng_20120130_CHD1_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 377 2.99 0.00 0 26 25 2 679.34924 1357.69121 -3.42 27.59 2835 2835 MS2 20/22 Linfeng_091311_rIgG_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 579 2.99 0.00 0 35 100 2 590.30597 1179.60466 3.55 28.60 2477 2477 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.99 0.00 1 8 25 2 762.39795 1523.78862 -0.05 29.85 2783 2783 MS2 17/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 554 2.99 0.00 0 16 100 2 651.86426 1302.72124 4.64 45.27 4971 4971 MS2 19/22 Linfeng_20120130_CHD1_3.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 363 2.99 0.00 2 12 25 4 626.07001 2501.25820 2.51 29.52 2853 2853 MS2 40/126 Linfeng_122411_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.99 0.00 0 32 25 2 651.86377 1302.72026 3.89 53.08 5715 5715 MS2 17/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 383 2.99 0.00 0 1 15 2 590.30219 1179.59709 -2.86 28.60 3208 3208 MS2 17/18 Linfeng_091311_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 538 2.98 0.00 0 38 100 2 590.30518 1179.60307 2.21 29.42 2642 2642 MS2 16/18 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.98 0.00 0 10 25 2 590.30310 1179.59892 -1.31 28.29 3196 3196 MS2 17/18 Linfeng_091311_rIgG_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 276 2.97 0.00 0 13 100 2 546.75549 1092.50371 0.73 3.09 520 520 MS2 19/26 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 525 2.97 0.00 0 10 100 2 633.32416 1265.64104 2.98 28.98 2000 2000 MS2 15/20 Linfeng_20120130_CHD1_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 200 2.97 0.00 0 12 25 2 546.75433 1092.50139 -1.39 3.36 341 341 MS2 20/26 Linfeng_091311_rIgG_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.97 0.00 1 2 25 2 697.36780 1393.72832 -2.81 24.53 2721 2721 MS2 18/22 Linfeng_091311_rIgG_2.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.97 0.00 0 21 25 2 738.37830 1475.74932 0.25 35.84 3461 3461 MS2 18/22 Linfeng_122411_rIgG_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 388 2.97 0.00 1 4 2 2 697.36963 1393.73198 -0.18 3.48 347 347 MS2 18/22 Linfeng_122411_rIgG_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 2.96 0.00 0 58 25 3 665.32904 1993.97257 -2.08 45.55 5385 5385 MS2 28/60 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 427 2.96 0.00 0 14 25 2 651.85986 1302.71245 -2.10 44.82 5299 5299 MS2 19/22 Linfeng_091311_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.96 0.00 0 11 25 2 590.30243 1179.59758 -2.45 28.37 3308 3308 MS2 17/18 Linfeng_091311_rIgG_10.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.96 0.00 1 8 25 3 648.00208 1941.99167 2.04 41.01 4187 4187 MS2 29/64 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 586 2.96 0.00 0 4 100 2 633.32629 1265.64531 6.36 28.54 2580 2580 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 502 2.96 0.00 1 9 100 2 762.40057 1523.79387 3.39 40.28 4622 4622 MS2 14/22 Linfeng_20120130_CHD1_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 536 2.96 0.00 0 19 100 2 633.32410 1265.64092 2.89 28.87 2017 2017 MS2 16/20 Linfeng_20120130_CHD1_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 473 2.96 0.00 0 27 25 3 434.90985 1302.71500 -0.15 43.61 4897 4897 MS2 27/44 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.96 0.00 0 28 25 2 590.30481 1179.60234 1.59 27.24 2269 2269 MS2 17/18 Linfeng_122411_rIgG_10.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 357 2.95 0.00 1 12 25 2 697.36755 1393.72783 -3.16 24.40 2403 2403 MS2 18/22 Linfeng_091311_rIgG_1.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 583 2.95 0.00 1 24 100 3 513.93420 1539.78806 2.89 28.54 2269 2269 MS2 24/44 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.95 0.00 0 3 12 2 651.85999 1302.71269 -1.92 44.97 5312 5312 MS2 19/22 Linfeng_091311_rIgG_7.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 389 2.95 0.00 0 23 25 2 738.37970 1475.75212 2.16 35.73 3289 3289 MS2 17/22 Linfeng_122411_rIgG_9.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 2.95 0.00 0 25 25 2 692.34601 1383.68474 -4.06 36.96 4454 4454 MS2 19/22 Linfeng_091311_rIgG_10.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 2.95 0.00 0 16 100 3 855.73022 2565.17612 3.59 29.14 2369 2369 MS2 24/100 Linfeng_20120130_CHD1_1.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.95 0.00 0 12 25 4 499.25043 1993.97988 1.59 43.75 4461 4461 MS2 38/90 Linfeng_122411_rIgG_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 531 2.94 0.00 0 4 67 2 633.32355 1265.63982 2.02 30.75 2777 2777 MS2 18/20 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.94 0.00 0 17 25 2 590.30298 1179.59868 -1.52 28.48 3160 3160 MS2 17/18 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.94 0.00 0 22 25 2 590.30511 1179.60295 2.10 27.27 2439 2439 MS2 17/18 Linfeng_122411_rIgG_2.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 341 2.94 0.00 1 4 25 2 819.93536 1638.86345 2.17 37.39 3745 3745 MS2 18/26 Linfeng_122411_rIgG_2.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 2.94 0.00 0 9 100 3 855.73010 2565.17575 3.45 28.33 2299 2299 MS2 25/100 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 585 2.93 0.00 0 47 100 2 590.30585 1179.60442 3.35 28.48 2455 2455 MS2 17/18 Linfeng_20120130_CHD1_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 523 2.93 0.00 0 76 100 2 997.49408 1993.98088 2.09 55.84 7521 7521 MS2 15/30 Linfeng_20120130_CHD1_4.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 266 2.93 0.00 0 3 100 3 855.72980 2565.17484 3.09 28.60 2098 2098 MS2 27/100 Linfeng_20120130_CHD1_9.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 63 2.93 0.00 0 30 100 2 650.77118 1300.53508 4.13 33.33 2827 2827 MS2 15/18 Linfeng_20120130_CHD1_2.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 303 2.93 0.00 0 31 25 2 997.48962 1993.97197 -2.38 44.83 5394 5394 MS2 18/30 Linfeng_091311_rIgG_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 471 2.92 0.00 1 6 100 2 697.37177 1393.73625 2.89 22.82 1581 1581 MS2 15/22 Linfeng_20120130_CHD1_5.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.92 0.00 0 73 100 2 858.93115 1716.85503 2.24 35.41 3793 3793 MS2 14/28 Linfeng_20120130_CHD1_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 266 2.92 0.00 0 16 100 3 861.06232 2581.17240 4.10 26.77 1760 1760 MS2 27/100 Linfeng_20120130_CHD1_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 528 2.92 0.00 0 47 100 2 633.32483 1265.64238 4.05 30.90 2671 2671 MS2 16/20 Linfeng_20120130_CHD1_1.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.92 0.00 0 4 23 3 492.58859 1475.75122 1.55 35.64 3497 3497 MS2 27/44 Linfeng_122411_rIgG_3.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.92 0.00 1 7 25 3 647.99969 1941.98453 -1.64 42.12 4953 4953 MS2 25/64 Linfeng_091311_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 488 2.92 0.00 0 3 6 2 651.86060 1302.71391 -0.98 44.63 5371 5371 MS2 19/22 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.92 0.00 0 16 18 2 651.86157 1302.71587 0.52 1.39 198 198 MS2 19/22 Linfeng_122411_rIgG_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 491 2.92 0.00 1 10 100 2 762.40082 1523.79436 3.71 40.75 4365 4365 MS2 14/22 Linfeng_20120130_CHD1_2.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 598 2.92 0.00 0 2 100 3 572.95636 1716.85453 1.95 34.01 2579 2579 MS2 30/56 Linfeng_20120130_CHD1_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 2.92 0.00 0 43 25 2 692.34656 1383.68584 -3.27 36.96 4275 4275 MS2 18/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 5 2.91 0.00 0 0 25 3 1104.77600 3312.31345 1.58 21.10 1597 1597 MS2 30/152 Linfeng_122411_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.91 0.00 0 2 15 2 651.86005 1302.71282 -1.82 44.65 5307 5307 MS2 19/22 Linfeng_091311_rIgG_3.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 272 2.91 0.00 1 10 25 2 670.83759 1340.66789 -1.03 19.13 1939 1939 MS2 19/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.91 0.00 0 0 14 3 492.58728 1475.74729 -1.12 35.70 3818 3818 MS2 26/44 Linfeng_122411_rIgG_5.raw High THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 542 2.91 0.00 0 19 100 2 997.49896 1993.99065 6.99 55.95 7547 7547 MS2 14/30 Linfeng_20120130_CHD1_4.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.91 0.00 1 10 25 3 777.06323 2329.17514 0.34 35.91 3157 3157 MS2 26/80 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 394 2.90 0.00 0 31 25 2 651.86371 1302.72014 3.80 49.79 5062 5062 MS2 18/22 Linfeng_122411_rIgG_9.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.90 0.00 1 4 5 2 697.36951 1393.73174 -0.35 3.42 359 359 MS2 18/22 Linfeng_122411_rIgG_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 318 2.89 0.00 1 7 25 2 697.36810 1393.72893 -2.37 24.57 2693 2693 MS2 18/22 Linfeng_091311_rIgG_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 498 2.89 0.00 0 34 100 2 692.35168 1383.69609 4.14 45.63 4393 4393 MS2 17/22 Linfeng_20120130_CHD1_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 213 2.89 0.00 0 3 25 2 563.27313 1125.53899 -2.93 21.13 2214 2214 MS2 16/18 Linfeng_091311_rIgG_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 181 2.89 0.00 0 17 25 2 546.75525 1092.50322 0.28 11.20 903 903 MS2 20/26 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 582 2.89 0.00 0 50 100 2 590.30548 1179.60369 2.72 30.76 2254 2254 MS2 16/18 Linfeng_20120130_CHD1_3.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.89 0.00 2 32 25 4 626.06964 2501.25673 1.93 28.69 2380 2380 MS2 37/126 Linfeng_122411_rIgG_9.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 565 2.88 0.00 2 9 100 4 626.07153 2501.26430 4.95 38.98 4388 4388 MS2 31/126 Linfeng_20120130_CHD1_1.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 189 2.88 0.00 0 11 25 2 546.75439 1092.50151 -1.28 3.23 315 315 MS2 20/26 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 275 2.88 0.00 0 16 25 2 639.36072 1277.71416 3.23 44.12 4597 4597 MS2 18/20 Linfeng_122411_rIgG_2.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 315 2.87 0.00 0 17 100 2 546.75665 1092.50603 2.85 12.47 1106 1106 MS2 22/26 Linfeng_20120130_CHD1_8.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 339 2.87 0.00 1 1 25 2 819.93524 1638.86321 2.02 37.28 3329 3329 MS2 18/26 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 391 2.87 0.00 0 4 18 2 590.30463 1179.60198 1.28 24.92 2341 2341 MS2 17/18 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 451 2.87 0.00 0 12 25 3 434.91104 1302.71857 2.59 43.54 4633 4633 MS2 29/44 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.87 0.00 0 3 17 2 590.30231 1179.59734 -2.66 28.51 3215 3215 MS2 17/18 Linfeng_091311_rIgG_6.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 209 2.87 0.00 0 11 23 2 563.27264 1125.53801 -3.79 21.41 2206 2206 MS2 16/18 Linfeng_091311_rIgG_5.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 555 2.87 0.00 1 22 100 3 508.60339 1523.79563 4.55 40.67 4814 4814 MS2 22/44 Linfeng_20120130_CHD1_4.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 128 2.87 0.00 1 0 100 2 1009.44873 2017.89018 2.95 25.42 1809 1809 MS2 16/30 Linfeng_20120130_CHD1_1.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 225 2.86 0.00 0 22 25 2 563.27277 1125.53826 -3.58 21.29 2314 2314 MS2 16/18 Linfeng_091311_rIgG_10.raw High AEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 348 2.86 0.00 1 0 25 3 762.71680 2286.13584 4.78 31.88 2290 2290 MS2 27/76 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 281 2.86 0.00 0 44 25 2 639.36108 1277.71489 3.80 55.44 5969 5969 MS2 17/20 Linfeng_122411_rIgG_2.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 291 2.86 0.00 1 54 25 3 447.56055 1340.66709 -1.64 19.06 1879 1879 MS2 24/44 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.86 0.00 0 5 12 2 590.30194 1179.59661 -3.28 28.55 3266 3266 MS2 17/18 Linfeng_091311_rIgG_8.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 2.86 0.00 0 15 100 3 861.06219 2581.17203 3.96 26.97 1897 1897 MS2 27/100 Linfeng_20120130_CHD1_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.86 0.00 0 25 25 2 651.86328 1302.71929 3.14 47.46 4774 4774 MS2 18/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 2 20 2 590.30200 1179.59673 -3.17 28.57 3203 3203 MS2 17/18 Linfeng_091311_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 193 2.85 0.00 0 23 25 2 546.75403 1092.50078 -1.95 3.04 299 299 MS2 20/26 Linfeng_091311_rIgG_7.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 257 2.85 0.00 1 16 25 3 447.56021 1340.66608 -2.39 18.86 1923 1923 MS2 22/44 Linfeng_091311_rIgG_2.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.85 0.00 0 10 22 3 453.23590 1357.69315 -1.99 33.49 3885 3885 MS2 31/44 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.85 0.00 0 4 25 2 633.32318 1265.63909 1.44 27.71 2668 2668 MS2 18/20 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.84 0.00 0 20 25 2 590.30457 1179.60185 1.17 27.38 2373 2373 MS2 17/18 Linfeng_122411_rIgG_8.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 428 2.84 0.00 2 5 17 3 401.23318 1201.68500 -4.14 16.16 1543 1543 MS2 22/36 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 302 2.84 0.00 0 19 25 2 639.35883 1277.71037 0.27 57.35 6547 6547 MS2 18/20 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 446 2.84 0.00 0 8 25 2 651.85785 1302.70842 -5.20 44.83 5288 5288 MS2 19/22 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 379 2.83 0.00 0 40 25 2 651.86475 1302.72222 5.39 43.49 3359 3359 MS2 19/22 Linfeng_122411_rIgG_1.raw High SLVNLGGSKSISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.83 0.00 1 40 25 3 563.33020 1687.97605 3.47 31.88 2651 2651 MS2 28/64 Linfeng_122411_rIgG_7.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 321 2.83 0.00 2 5 25 4 626.06708 2501.24648 -2.17 30.56 3510 3510 MS2 38/126 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 2.83 0.00 0 9 25 3 434.91116 1302.71894 2.88 43.79 4305 4305 MS2 29/44 Linfeng_122411_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 486 2.82 0.00 0 22 25 2 651.86041 1302.71355 -1.26 44.88 5300 5300 MS2 19/22 Linfeng_091311_rIgG_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 505 2.82 0.00 0 11 100 2 633.32416 1265.64104 2.98 28.73 2383 2383 MS2 15/20 Linfeng_20120130_CHD1_4.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.81 0.00 1 7 25 2 697.36804 1393.72881 -2.46 24.57 2686 2686 MS2 18/22 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 481 2.81 0.00 0 49 100 2 692.35156 1383.69585 3.97 45.56 5032 5032 MS2 15/22 Linfeng_20120130_CHD1_3.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.81 0.00 2 22 25 3 401.23306 1201.68463 -4.44 16.38 1559 1559 MS2 23/36 Linfeng_091311_rIgG_6.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 527 2.81 0.00 1 20 100 3 508.60321 1523.79508 4.18 40.54 4316 4316 MS2 20/44 Linfeng_20120130_CHD1_2.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 346 2.81 0.00 0 20 100 2 563.27643 1125.54558 2.93 19.10 1260 1260 MS2 16/18 Linfeng_20120130_CHD1_1.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.80 0.00 0 38 25 3 553.27136 1657.79953 3.98 29.09 2078 2078 MS2 26/64 Linfeng_122411_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.80 0.00 0 17 25 2 651.86243 1302.71758 1.83 37.01 3862 3862 MS2 19/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 297 2.80 0.00 0 7 25 2 639.35742 1277.70757 -1.93 39.55 4662 4662 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium SKAEAESLYQSKYEELQITAGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 313 2.80 0.00 2 4 25 4 626.06671 2501.24502 -2.76 30.80 3521 3521 MS2 42/126 Linfeng_091311_rIgG_6.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 2.80 0.00 0 5 100 3 861.06171 2581.17057 3.39 27.02 1866 1866 MS2 25/100 Linfeng_20120130_CHD1_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.80 0.00 0 35 25 2 651.86230 1302.71733 1.64 36.15 3187 3187 MS2 19/22 Linfeng_122411_rIgG_7.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 111 2.80 0.00 1 0 100 2 1009.44409 2017.88091 -1.65 25.94 2061 2061 MS2 20/30 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.80 0.00 0 40 25 2 651.86322 1302.71916 3.05 49.19 4825 4825 MS2 17/22 Linfeng_122411_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 340 2.80 0.00 0 11 25 2 633.32440 1265.64153 3.37 27.94 2179 2179 MS2 17/20 Linfeng_122411_rIgG_7.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.79 0.00 0 14 25 3 572.95648 1716.85489 2.16 29.97 2411 2411 MS2 24/56 Linfeng_122411_rIgG_7.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.79 0.00 2 10 100 3 436.89084 1308.65796 2.80 17.26 1401 1401 MS2 16/36 Linfeng_20120130_CHD1_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 276 2.79 0.00 0 14 25 2 639.36023 1277.71318 2.47 41.60 4276 4276 MS2 18/20 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.79 0.00 0 5 3 2 633.32239 1265.63750 0.19 4.42 487 487 MS2 17/20 Linfeng_122411_rIgG_10.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 353 2.78 0.00 0 33 25 2 590.30536 1179.60344 2.52 25.96 2380 2380 MS2 17/18 Linfeng_122411_rIgG_4.raw High KQISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 639 2.78 0.00 1 27 100 3 615.65601 1844.95346 3.96 31.64 2521 2521 MS2 22/60 Linfeng_20120130_CHD1_2.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 56 2.78 0.00 0 31 100 2 650.77051 1300.53374 3.10 33.01 3446 3446 MS2 15/18 Linfeng_20120130_CHD1_10.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.78 0.00 0 10 25 4 499.25089 1993.98171 2.51 43.69 4540 4540 MS2 39/90 Linfeng_122411_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 327 2.78 0.00 0 44 25 2 633.31952 1265.63176 -4.35 29.21 3354 3354 MS2 18/20 Linfeng_091311_rIgG_8.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 583 2.77 0.00 1 23 100 3 513.93439 1539.78861 3.24 28.11 2383 2383 MS2 21/44 Linfeng_20120130_CHD1_5.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 258 2.77 0.00 1 9 25 3 447.56049 1340.66690 -1.77 19.21 1919 1919 MS2 25/44 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.77 0.00 0 9 15 2 633.32336 1265.63945 1.73 26.97 2514 2514 MS2 17/20 Linfeng_122411_rIgG_4.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 334 2.77 0.00 1 9 25 2 697.36816 1393.72905 -2.28 24.92 2707 2707 MS2 16/22 Linfeng_091311_rIgG_7.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 367 2.77 0.00 0 2 25 4 499.24863 1993.97268 -2.02 44.81 5392 5392 MS2 35/90 Linfeng_091311_rIgG_8.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 677 2.76 0.00 1 35 100 3 434.90622 1302.70411 2.18 24.10 1702 1702 MS2 21/40 Linfeng_20120130_CHD1_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 267 2.76 0.00 0 19 25 2 639.35938 1277.71147 1.13 57.08 6542 6542 MS2 18/20 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 533 2.76 0.00 0 5 100 2 633.32440 1265.64153 3.37 28.52 2497 2497 MS2 14/20 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 550 2.76 0.00 0 13 100 2 633.32465 1265.64202 3.76 30.72 2353 2353 MS2 15/20 Linfeng_20120130_CHD1_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.76 0.00 0 14 16 2 651.85999 1302.71269 -1.92 44.93 5407 5407 MS2 19/22 Linfeng_091311_rIgG_8.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 269 2.76 0.00 1 4 1 3 447.55957 1340.66416 -3.82 1.84 233 233 MS2 26/44 Linfeng_091311_rIgG_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 535 2.76 0.00 1 13 100 3 508.60199 1523.79142 1.78 40.54 4946 4946 MS2 15/44 Linfeng_20120130_CHD1_10.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 293 2.75 0.00 0 34 100 2 546.75604 1092.50481 1.74 3.07 182 182 MS2 20/26 Linfeng_20120130_CHD1_1.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.75 0.00 1 37 25 2 697.37122 1393.73516 2.10 21.75 1875 1875 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 286 2.75 0.00 0 51 25 2 639.36121 1277.71514 3.99 54.35 5853 5853 MS2 17/20 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 355 2.75 0.00 0 49 25 2 590.30280 1179.59831 -1.83 58.93 6958 6958 MS2 15/18 Linfeng_091311_rIgG_2.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 2.75 0.00 1 21 25 2 697.36774 1393.72820 -2.89 24.88 2764 2764 MS2 18/22 Linfeng_091311_rIgG_8.raw High LNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.75 0.00 1 2 7 3 648.00055 1941.98709 -0.32 40.99 4544 4544 MS2 29/64 Linfeng_122411_rIgG_5.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 493 2.74 0.00 1 3 100 2 697.37201 1393.73674 3.24 22.80 1791 1791 MS2 13/22 Linfeng_20120130_CHD1_10.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 194 2.74 0.00 0 19 25 2 546.75452 1092.50176 -1.06 3.54 371 371 MS2 20/26 Linfeng_091311_rIgG_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 253 2.74 0.00 0 53 25 2 639.36023 1277.71318 2.47 48.60 5166 5166 MS2 18/20 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 602 2.74 0.00 0 35 100 2 590.30573 1179.60417 3.14 28.70 2496 2496 MS2 17/18 Linfeng_20120130_CHD1_5.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 539 2.74 0.00 0 16 100 2 633.32422 1265.64116 3.08 30.55 2846 2846 MS2 16/20 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.74 0.00 0 47 25 2 651.86499 1302.72270 5.77 2.67 369 369 MS2 19/22 Linfeng_122411_rIgG_1.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.74 0.00 0 17 25 4 499.25122 1993.98305 3.18 43.60 4523 4523 MS2 42/90 Linfeng_122411_rIgG_3.raw Medium NKLNDLEDALQQAKEDLAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 392 2.73 0.00 2 11 25 4 546.78595 2184.12197 -1.67 41.52 4912 4912 MS2 33/108 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 594 2.73 0.00 0 100 2 738.40015 1475.79302 5.21 34.99 3789 3789 MS2 17/22 Linfeng_20120130_CHD1_8.raw Medium THNLEPYFESFINNLR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 412 2.73 0.00 0 23 25 4 499.25110 1993.98256 2.94 43.37 4612 4612 MS2 32/90 Linfeng_122411_rIgG_4.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 2.73 0.00 0 14 100 3 861.06256 2581.17313 4.38 27.77 2195 2195 MS2 26/100 Linfeng_20120130_CHD1_4.raw High SKAEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 473 2.73 0.00 1 3 100 2 670.84070 1340.67412 3.61 18.08 1485 1485 MS2 17/22 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 463 2.72 0.00 0 14 16 3 434.90878 1302.71180 -2.61 44.53 5113 5113 MS2 24/44 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 267 2.72 0.00 0 15 25 2 639.35748 1277.70769 -1.83 57.90 6603 6603 MS2 17/20 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 532 2.71 0.00 1 14 100 3 508.60287 1523.79407 3.52 40.69 4349 4349 MS2 19/44 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 419 2.71 0.00 0 32 25 2 651.86340 1302.71953 3.33 48.40 5141 5141 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 248 2.71 0.00 0 24 25 2 639.36096 1277.71465 3.61 52.60 5658 5658 MS2 18/20 Linfeng_122411_rIgG_2.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.71 0.00 1 0 25 4 538.27356 2150.07241 -2.52 41.93 5031 5031 MS2 31/96 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High QISNLQQSISDAEQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 323 2.71 0.00 0 20 25 3 572.95337 1716.84555 -3.28 30.82 3645 3645 MS2 25/56 Linfeng_091311_rIgG_10.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 551 2.70 0.00 0 56 100 2 633.32428 1265.64128 3.18 31.06 2843 2843 MS2 16/20 Linfeng_20120130_CHD1_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 190 2.70 0.00 0 8 25 2 546.75433 1092.50139 -1.39 3.01 286 286 MS2 20/26 Linfeng_091311_rIgG_3.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 54 2.70 0.00 0 28 100 2 650.76837 1300.52947 -0.19 33.02 3343 3343 MS2 15/18 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 331 2.70 0.00 1 5 25 2 697.36835 1393.72942 -2.02 24.84 2667 2667 MS2 17/22 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 441 2.70 0.00 0 52 25 2 651.86316 1302.71904 2.96 54.46 5786 5786 MS2 15/22 Linfeng_122411_rIgG_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.70 0.00 0 42 25 2 651.86359 1302.71990 3.61 53.22 5461 5461 MS2 16/22 Linfeng_122411_rIgG_9.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.70 0.00 0 34 100 2 563.27594 1125.54460 2.06 19.27 1248 1248 MS2 14/18 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.70 0.00 0 5 5 3 434.91040 1302.71665 1.12 43.79 4553 4553 MS2 30/44 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 332 2.69 0.00 0 21 25 2 639.35999 1277.71269 2.08 38.68 3768 3768 MS2 18/20 Linfeng_122411_rIgG_10.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 64 2.69 0.00 0 38 100 2 650.77167 1300.53606 4.88 33.44 2705 2705 MS2 15/18 Linfeng_20120130_CHD1_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 317 2.69 0.00 0 29 25 2 633.32385 1265.64043 2.50 26.66 2330 2330 MS2 18/20 Linfeng_122411_rIgG_3.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.69 0.00 0 20 25 2 633.32373 1265.64018 2.31 26.46 2330 2330 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.69 0.00 0 15 25 2 639.35748 1277.70769 -1.83 40.82 4627 4627 MS2 18/20 Linfeng_091311_rIgG_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 295 2.69 0.00 0 12 7 2 633.31982 1265.63237 -3.86 28.95 3286 3286 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.69 0.00 0 6 25 3 393.87201 1179.60147 0.85 27.15 2595 2595 MS2 19/36 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 366 2.69 0.00 0 45 25 2 590.30524 1179.60320 2.31 25.16 2130 2130 MS2 17/18 Linfeng_122411_rIgG_3.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 527 2.69 0.00 1 42 100 3 508.60315 1523.79489 4.06 41.17 4466 4466 MS2 18/44 Linfeng_20120130_CHD1_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 595 2.69 0.00 2 10 100 3 436.89072 1308.65760 2.52 17.32 1108 1108 MS2 18/36 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.69 0.00 0 28 25 3 393.87234 1179.60248 1.70 25.37 2157 2157 MS2 18/36 Linfeng_122411_rIgG_3.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 2.68 0.00 0 15 100 2 546.75677 1092.50627 3.08 12.48 824 824 MS2 22/26 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 442 2.68 0.00 0 10 25 3 434.91046 1302.71683 1.26 43.76 4143 4143 MS2 29/44 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 429 2.68 0.00 0 61 100 2 692.35095 1383.69463 3.08 45.64 4656 4656 MS2 14/22 Linfeng_20120130_CHD1_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.68 0.00 0 38 25 2 651.86212 1302.71697 1.36 46.32 5032 5032 MS2 18/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 322 2.68 0.00 0 11 25 2 639.35724 1277.70720 -2.22 41.68 4931 4931 MS2 18/20 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 320 2.68 0.00 0 25 25 2 633.32239 1265.63750 0.19 25.81 2460 2460 MS2 18/20 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.68 0.00 0 26 25 2 651.86261 1302.71794 2.11 36.74 3416 3416 MS2 19/22 Linfeng_122411_rIgG_9.raw High mSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 M1(Oxidation); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 2.67 0.00 0 24 100 3 861.06165 2581.17038 3.32 26.88 1887 1887 MS2 21/100 Linfeng_20120130_CHD1_9.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 180 2.67 0.00 0 19 25 2 546.75433 1092.50139 -1.39 11.01 860 860 MS2 18/26 Linfeng_091311_rIgG_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 486 2.67 0.00 0 23 100 2 633.32379 1265.64031 2.41 29.04 2042 2042 MS2 14/20 Linfeng_20120130_CHD1_6.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 775 2.67 0.00 0 20 100 2 487.27081 973.53435 3.10 26.24 1750 1750 MS2 12/14 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.67 0.00 0 43 25 2 590.30524 1179.60320 2.31 28.17 2205 2205 MS2 16/18 Linfeng_122411_rIgG_7.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 342 2.67 0.00 1 2 19 2 819.93494 1638.86260 1.64 37.55 3740 3740 MS2 19/26 Linfeng_122411_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 336 2.67 0.00 0 10 25 2 639.35712 1277.70696 -2.41 39.72 4662 4662 MS2 18/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 521 2.66 0.00 0 32 100 2 651.86304 1302.71880 2.77 10.75 997 997 MS2 15/22 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 2.66 0.00 1 2 100 2 697.37238 1393.73747 3.76 22.44 1500 1500 MS2 14/22 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.66 0.00 0 42 100 2 651.86078 1302.71428 -0.70 48.93 6665 6665 MS2 16/22 Linfeng_20120130_CHD1_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 181 2.66 0.00 0 18 25 2 546.75494 1092.50261 -0.27 11.75 957 957 MS2 20/26 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.66 0.00 0 30 25 2 651.86310 1302.71892 2.86 44.93 4292 4292 MS2 18/22 Linfeng_122411_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 347 2.66 0.00 0 56 25 2 633.32391 1265.64055 2.60 22.78 1798 1798 MS2 14/20 Linfeng_122411_rIgG_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 247 2.66 0.00 0 10 25 2 639.36072 1277.71416 3.23 54.23 6415 6415 MS2 18/20 Linfeng_091311_rIgG_3.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 2.66 0.00 2 21 25 3 401.23364 1201.68637 -2.99 15.94 1486 1486 MS2 19/36 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.65 0.00 0 57 100 2 692.35181 1383.69634 4.32 45.37 5962 5962 MS2 15/22 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.65 0.00 0 46 25 2 651.86365 1302.72002 3.71 49.43 5395 5395 MS2 18/22 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 299 2.65 0.00 0 47 25 2 639.36005 1277.71282 2.18 51.42 5981 5981 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 316 2.65 0.00 0 9 25 2 639.35718 1277.70708 -2.31 39.73 4653 4653 MS2 18/20 Linfeng_091311_rIgG_7.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 634 2.65 0.00 1 39 100 3 434.90652 1302.70502 2.89 24.27 1546 1546 MS2 21/40 Linfeng_20120130_CHD1_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 2.64 0.00 0 12 25 2 639.35724 1277.70720 -2.22 40.53 4853 4853 MS2 18/20 Linfeng_091311_rIgG_2.raw High LRSEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.64 0.00 2 21 100 3 401.23593 1201.69324 2.72 16.87 1052 1052 MS2 20/36 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 456 2.64 0.00 0 18 25 3 434.91074 1302.71765 1.89 43.74 4704 4704 MS2 29/44 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 355 2.63 0.00 0 17 25 2 639.35803 1277.70879 -0.97 58.46 6793 6793 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 508 2.63 0.00 1 43 100 2 770.39813 1539.78899 3.49 29.16 2053 2053 MS2 13/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 285 2.63 0.00 0 22 25 2 639.35754 1277.70781 -1.74 46.15 5566 5566 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.62 0.00 0 56 25 2 651.86316 1302.71904 2.96 44.77 4836 4836 MS2 17/22 Linfeng_122411_rIgG_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 302 2.62 0.00 0 3 25 2 633.32056 1265.63384 -2.71 29.17 3286 3286 MS2 18/20 Linfeng_091311_rIgG_9.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 147 2.62 0.00 1 7 100 2 1009.44977 2017.89226 3.98 25.80 1667 1667 MS2 16/30 Linfeng_20120130_CHD1_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.62 0.00 0 39 25 2 651.86414 1302.72099 4.45 49.42 5271 5271 MS2 16/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 360 2.62 0.00 0 26 25 2 639.35785 1277.70842 -1.26 47.00 5572 5572 MS2 18/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 454 2.62 0.00 0 8 21 3 434.91064 1302.71738 1.68 43.92 4482 4482 MS2 29/44 Linfeng_122411_rIgG_8.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 187 2.62 0.00 0 21 25 2 546.75391 1092.50054 -2.17 1.14 124 124 MS2 20/26 Linfeng_091311_rIgG_1.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 297 2.62 0.00 0 5 23 2 633.32050 1265.63371 -2.80 29.18 3305 3305 MS2 18/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 589 2.62 0.00 2 13 100 3 436.89093 1308.65824 3.01 17.53 1092 1092 MS2 16/36 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.61 0.00 0 33 25 2 590.30481 1179.60234 1.59 23.92 2206 2206 MS2 17/18 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.61 0.00 0 24 25 2 639.36078 1277.71428 3.33 49.59 5292 5292 MS2 15/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 298 2.61 0.00 0 6 25 2 639.35681 1277.70635 -2.88 40.79 4786 4786 MS2 18/20 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 2.61 0.00 0 27 100 2 633.32446 1265.64165 3.47 30.90 2271 2271 MS2 14/20 Linfeng_20120130_CHD1_3.raw High NmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 30 2.61 0.00 0 22 100 2 666.76587 1332.52446 3.69 17.96 1185 1185 MS2 13/18 Linfeng_20120130_CHD1_1.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 690 2.61 0.00 0 33 25 2 487.26700 973.52672 -4.74 27.81 3174 3174 MS2 12/14 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.60 0.00 0 9 20 3 434.91055 1302.71711 1.47 43.80 4426 4426 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.60 0.00 0 17 25 2 639.35687 1277.70647 -2.79 43.85 5205 5205 MS2 18/20 Linfeng_091311_rIgG_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 169 2.60 0.00 0 17 25 2 546.75513 1092.50298 0.06 4.19 380 380 MS2 20/26 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.60 0.00 0 26 25 2 651.86206 1302.71684 1.27 46.07 4436 4436 MS2 18/22 Linfeng_122411_rIgG_7.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 582 2.60 0.00 1 22 100 3 513.93420 1539.78806 2.89 28.95 2025 2025 MS2 20/44 Linfeng_20120130_CHD1_3.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 599 2.60 0.00 1 15 100 3 513.93396 1539.78733 2.41 28.26 2411 2411 MS2 18/44 Linfeng_20120130_CHD1_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 278 2.59 0.00 0 9 25 2 639.35864 1277.71001 -0.02 56.85 6692 6692 MS2 17/20 Linfeng_091311_rIgG_5.raw High WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 433 2.59 0.00 0 5 25 3 492.58841 1475.75068 1.17 36.00 3735 3735 MS2 23/44 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 298 2.59 0.00 0 12 25 2 639.35742 1277.70757 -1.93 39.43 4653 4653 MS2 18/20 Linfeng_091311_rIgG_3.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 329 2.59 0.00 1 28 25 2 697.36804 1393.72881 -2.46 24.82 2692 2692 MS2 17/22 Linfeng_091311_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.59 0.00 0 56 25 2 590.30194 1179.59661 -3.28 58.93 6828 6828 MS2 15/18 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.58 0.00 0 32 25 2 651.86401 1302.72075 4.27 52.62 5721 5721 MS2 17/22 Linfeng_122411_rIgG_4.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.58 0.00 2 9 100 3 436.89099 1308.65842 3.15 17.65 1106 1106 MS2 17/36 Linfeng_20120130_CHD1_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 320 2.58 0.00 0 14 25 2 639.35693 1277.70659 -2.69 43.98 5290 5290 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 257 2.58 0.00 0 27 25 2 639.36108 1277.71489 3.80 38.32 2863 2863 MS2 17/20 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.57 0.00 0 20 25 2 639.35675 1277.70622 -2.98 39.80 4662 4662 MS2 18/20 Linfeng_091311_rIgG_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 328 2.57 0.00 0 24 25 2 633.32306 1265.63884 1.25 4.49 473 473 MS2 17/20 Linfeng_122411_rIgG_9.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 446 2.57 0.00 0 51 25 3 434.91119 1302.71903 2.95 43.65 4529 4529 MS2 26/44 Linfeng_122411_rIgG_3.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 58 2.57 0.00 0 39 100 2 650.77014 1300.53301 2.53 33.13 2728 2728 MS2 14/18 Linfeng_20120130_CHD1_9.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 315 2.57 0.00 0 0 25 2 639.35718 1277.70708 -2.31 41.60 4989 4989 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.57 0.00 0 39 25 3 393.87250 1179.60294 2.09 26.07 2395 2395 MS2 18/36 Linfeng_122411_rIgG_4.raw High TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 530 2.57 0.00 1 2 100 2 697.37219 1393.73711 3.50 22.70 1436 1436 MS2 13/22 Linfeng_20120130_CHD1_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.57 0.00 2 12 100 3 436.89081 1308.65787 2.73 17.92 1286 1286 MS2 17/36 Linfeng_20120130_CHD1_9.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.57 0.00 0 9 9 2 633.32001 1265.63274 -3.57 29.24 3261 3261 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 285 2.57 0.00 0 21 25 2 639.36041 1277.71355 2.75 51.59 5541 5541 MS2 17/20 Linfeng_122411_rIgG_2.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 64 2.57 0.00 0 38 100 2 650.77142 1300.53557 4.50 33.09 3115 3115 MS2 15/18 Linfeng_20120130_CHD1_1.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 68 2.56 0.00 0 11 100 2 650.77094 1300.53459 3.75 34.02 3665 3665 MS2 14/18 Linfeng_20120130_CHD1_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 384 2.56 0.00 0 35 25 2 651.86389 1302.72051 4.08 49.14 5331 5331 MS2 16/22 Linfeng_122411_rIgG_4.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 597 2.56 0.00 1 39 100 3 513.93402 1539.78751 2.53 29.16 2132 2132 MS2 15/44 Linfeng_20120130_CHD1_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.56 0.00 0 39 100 2 692.35071 1383.69414 2.73 2.17 443 443 MS2 14/22 Linfeng_20120130_CHD1_8.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 308 2.56 0.00 0 5 25 2 692.35089 1383.69451 3.00 35.88 2635 2635 MS2 16/22 Linfeng_122411_rIgG_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 346 2.55 0.00 0 13 25 3 461.90231 1383.69239 1.46 35.97 3681 3681 MS2 13/44 Linfeng_122411_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 299 2.54 0.00 0 47 25 2 633.32098 1265.63469 -2.03 29.28 3300 3300 MS2 18/20 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 520 2.54 0.00 0 9 100 2 633.32434 1265.64141 3.27 29.71 2221 2221 MS2 17/20 Linfeng_20120130_CHD1_9.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 337 2.54 0.00 0 6 25 2 639.35815 1277.70903 -0.78 45.93 5466 5466 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.54 0.00 0 56 25 3 393.87210 1179.60175 1.08 24.37 2266 2266 MS2 20/36 Linfeng_122411_rIgG_5.raw High QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 360 2.54 0.00 1 19 13 3 777.06268 2329.17350 -0.36 36.13 3877 3877 MS2 27/80 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.54 0.00 0 11 25 2 639.35730 1277.70732 -2.12 39.69 4805 4805 MS2 18/20 Linfeng_091311_rIgG_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 2.54 0.00 0 3 25 2 639.35712 1277.70696 -2.41 40.59 4794 4794 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 496 2.54 0.00 0 29 25 2 651.86072 1302.71416 -0.79 47.82 5532 5532 MS2 18/22 Linfeng_091311_rIgG_1.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 768 2.53 0.00 0 18 100 2 487.27054 973.53380 2.54 29.86 2133 2133 MS2 13/14 Linfeng_20120130_CHD1_3.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 58 2.53 0.00 0 35 81 2 650.77075 1300.53423 3.47 33.44 3360 3360 MS2 14/18 Linfeng_20120130_CHD1_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 512 2.53 0.00 0 17 100 2 633.32385 1265.64043 2.50 30.65 2897 2897 MS2 17/20 Linfeng_20120130_CHD1_5.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 437 2.53 0.00 0 24 100 2 533.26550 1065.52373 2.42 16.55 1059 1059 MS2 12/16 Linfeng_20120130_CHD1_4.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 203 2.53 0.00 0 32 25 2 563.27344 1125.53960 -2.38 19.14 1682 1682 MS2 15/18 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High NSKIEISELNR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 679 2.52 0.00 1 39 100 3 434.90628 1302.70429 2.32 23.91 1677 1677 MS2 23/40 Linfeng_20120130_CHD1_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 320 2.52 0.00 0 0 25 2 639.35840 1277.70952 -0.40 47.96 5722 5722 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 284 2.52 0.00 0 21 25 2 639.35828 1277.70928 -0.59 47.07 5611 5611 MS2 18/20 Linfeng_091311_rIgG_3.raw High NMQDmVEDYR Unambiguous 1 1 IPI00220327.4 M5(Oxidation) CID 1.0000 0.0000 1 1 50 2.51 0.00 0 20 100 2 658.76764 1316.52800 2.56 23.42 1542 1542 MS2 13/18 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 289 2.51 0.00 0 20 25 2 639.35724 1277.70720 -2.22 40.76 4793 4793 MS2 18/20 Linfeng_091311_rIgG_6.raw High MSGEcAPNVSVSVSTSHTTISGGGSR Unambiguous 1 1 IPI00220327.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 107 2.51 0.00 0 0 4 3 855.72650 2565.16495 -0.76 4.00 427 427 MS2 31/100 Linfeng_122411_rIgG_3.raw Medium SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 462 2.50 0.00 0 6 20 3 434.90897 1302.71234 -2.18 44.90 5309 5309 MS2 24/44 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 600 2.50 0.00 2 19 100 3 436.89096 1308.65833 3.08 17.18 1130 1130 MS2 17/36 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 373 2.50 0.00 0 39 25 2 590.30554 1179.60381 2.83 27.32 2419 2419 MS2 17/18 Linfeng_122411_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 405 2.50 0.00 0 18 25 2 639.35785 1277.70842 -1.26 49.38 5973 5973 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.49 0.00 0 42 25 2 590.30548 1179.60369 2.72 27.14 2091 2091 MS2 16/18 Linfeng_122411_rIgG_7.raw Medium QISNLQQSISDAEQRGENALK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 362 2.49 0.00 1 32 25 3 777.06378 2329.17679 1.05 36.30 3582 3582 MS2 24/80 Linfeng_122411_rIgG_3.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 555 2.49 0.00 1 21 100 3 508.60327 1523.79526 4.30 40.18 4838 4838 MS2 21/44 Linfeng_20120130_CHD1_8.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.49 0.00 0 28 25 2 633.31995 1265.63262 -3.67 28.90 3323 3323 MS2 18/20 Linfeng_091311_rIgG_2.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 298 2.49 0.00 0 3 5 2 633.32043 1265.63359 -2.90 29.07 3034 3034 MS2 18/20 Linfeng_091311_rIgG_1.raw Medium YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.48 0.00 0 34 25 3 393.87280 1179.60385 2.87 25.16 2156 2156 MS2 18/36 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.48 0.00 0 27 25 2 590.30371 1179.60015 -0.28 57.86 6745 6745 MS2 13/18 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 463 2.48 0.00 0 1 2 2 639.35834 1277.70940 -0.50 48.56 6618 6618 MS2 14/20 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 421 2.48 0.00 0 46 25 2 590.30371 1179.60015 -0.28 57.81 6865 6865 MS2 14/18 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 321 2.48 0.00 0 2 25 2 639.35706 1277.70683 -2.50 42.71 5061 5061 MS2 18/20 Linfeng_091311_rIgG_4.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 369 2.48 0.00 1 7 25 3 465.24707 1393.72666 -4.00 24.72 2797 2797 MS2 24/44 Linfeng_091311_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 432 2.48 0.00 0 27 25 2 651.86340 1302.71953 3.33 47.38 5161 5161 MS2 17/22 Linfeng_122411_rIgG_6.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 48 2.48 0.00 0 55 100 2 650.76740 1300.52751 -1.69 33.08 3491 3491 MS2 15/18 Linfeng_20120130_CHD1_5.raw Medium WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.48 0.00 0 3 25 3 492.58643 1475.74472 -2.86 36.85 4300 4300 MS2 24/44 Linfeng_091311_rIgG_6.raw Medium WELLQQVDTSTR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.47 0.00 0 2 25 3 492.58850 1475.75095 1.36 35.73 3651 3651 MS2 23/44 Linfeng_122411_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 534 2.47 0.00 0 7 100 2 517.26398 1033.52068 4.45 22.18 1479 1479 MS2 13/16 Linfeng_20120130_CHD1_1.raw Medium TNAENEFVTIKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 582 2.47 0.00 1 17 100 3 465.25015 1393.73590 2.64 26.88 2128 2128 MS2 19/44 Linfeng_20120130_CHD1_5.raw Medium THNLEPYFESFINNLRR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.47 0.00 1 2 25 3 717.36542 2150.08170 1.80 41.76 4454 4454 MS2 17/64 Linfeng_122411_rIgG_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.47 0.00 0 40 25 2 590.30267 1179.59807 -2.04 29.66 3367 3367 MS2 16/18 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.47 0.00 0 10 25 2 651.86139 1302.71550 0.24 49.42 5906 5906 MS2 18/22 Linfeng_091311_rIgG_3.raw High LDSELKNmQDmVEDYR Unambiguous 1 1 IPI00220327.4 M8(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 150 2.47 0.00 1 8 100 2 1009.44873 2017.89018 2.95 26.01 1726 1726 MS2 14/30 Linfeng_20120130_CHD1_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 404 2.47 0.00 0 42 25 2 590.30255 1179.59783 -2.24 29.37 3343 3343 MS2 17/18 Linfeng_091311_rIgG_4.raw High SGGGFSSGSAGIINYQR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 266 2.46 0.00 0 12 25 2 829.40283 1657.79839 3.29 24.97 1978 1978 MS2 16/32 Linfeng_122411_rIgG_10.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 2.46 0.00 0 52 100 2 692.35181 1383.69634 4.32 45.40 5482 5482 MS2 15/22 Linfeng_20120130_CHD1_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.46 0.00 0 20 25 2 639.35992 1277.71257 1.99 54.68 6585 6585 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 406 2.45 0.00 0 23 25 2 651.86316 1302.71904 2.96 46.90 4952 4952 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 328 2.45 0.00 0 33 25 2 639.35712 1277.70696 -2.41 41.51 4915 4915 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.45 0.00 2 5 100 3 436.89117 1308.65897 3.57 18.20 1201 1201 MS2 17/36 Linfeng_20120130_CHD1_1.raw Medium LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 559 2.45 0.00 1 28 100 3 508.60333 1523.79544 4.43 40.11 4825 4825 MS2 18/44 Linfeng_20120130_CHD1_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.45 0.00 0 25 25 2 639.35742 1277.70757 -1.93 41.96 4933 4933 MS2 18/20 Linfeng_091311_rIgG_7.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 703 2.45 0.00 0 7 100 2 487.27097 973.53465 3.41 26.00 1876 1876 MS2 13/14 Linfeng_20120130_CHD1_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 519 2.44 0.00 0 10 100 2 633.32434 1265.64141 3.27 28.61 2065 2065 MS2 15/20 Linfeng_20120130_CHD1_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 293 2.44 0.00 0 12 25 2 639.35651 1277.70574 -3.36 39.73 4633 4633 MS2 18/20 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 458 2.44 0.00 0 35 25 2 651.85931 1302.71135 -2.95 37.84 4445 4445 MS2 19/22 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.44 0.00 0 52 25 2 651.86298 1302.71868 2.67 46.70 5032 5032 MS2 18/22 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 2.44 0.00 0 48 25 2 590.30420 1179.60112 0.55 4.87 530 530 MS2 15/18 Linfeng_122411_rIgG_8.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 483 2.44 0.00 1 18 25 2 473.25323 945.49919 -0.90 3.19 310 310 MS2 14/16 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 535 2.43 0.00 0 7 7 2 487.26852 973.52977 -1.60 4.01 424 424 MS2 13/14 Linfeng_122411_rIgG_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 322 2.43 0.00 0 11 25 2 639.35876 1277.71025 0.17 50.14 5998 5998 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 298 2.43 0.00 0 21 25 2 639.35675 1277.70622 -2.98 45.08 5429 5429 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 434 2.43 0.00 0 34 25 2 651.85980 1302.71233 -2.20 49.38 5974 5974 MS2 18/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 397 2.43 0.00 0 48 25 2 590.30524 1179.60320 2.31 24.90 2121 2121 MS2 16/18 Linfeng_122411_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 544 2.43 0.00 0 50 100 2 590.30548 1179.60369 2.72 28.89 2635 2635 MS2 14/18 Linfeng_20120130_CHD1_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 294 2.43 0.00 0 12 25 2 639.35815 1277.70903 -0.78 57.73 6858 6858 MS2 18/20 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 751 2.43 0.00 0 12 100 2 487.27066 973.53404 2.79 26.27 2017 2017 MS2 13/14 Linfeng_20120130_CHD1_5.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 238 2.42 0.00 0 37 25 2 533.26251 1065.51775 -3.19 20.82 2199 2199 MS2 14/16 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 2.42 0.00 0 12 25 2 639.35889 1277.71050 0.36 57.87 6780 6780 MS2 17/20 Linfeng_091311_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.42 0.00 0 10 25 2 590.30426 1179.60124 0.65 56.69 6774 6774 MS2 16/18 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 334 2.42 0.00 0 0 25 2 639.35870 1277.71013 0.08 52.20 6228 6228 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 252 2.42 0.00 0 13 25 2 639.35742 1277.70757 -1.93 58.91 6875 6875 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 276 2.42 0.00 0 23 25 2 639.35724 1277.70720 -2.22 58.75 6942 6942 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 359 2.42 0.00 0 58 25 2 590.30292 1179.59856 -1.62 29.39 3352 3352 MS2 16/18 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.41 0.00 0 26 25 2 651.86377 1302.72026 3.89 52.63 5737 5737 MS2 18/22 Linfeng_122411_rIgG_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 169 2.41 0.00 0 17 25 2 546.75500 1092.50273 -0.16 7.28 594 594 MS2 17/26 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.41 0.00 0 39 25 2 651.86414 1302.72099 4.45 54.73 5942 5942 MS2 17/22 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 409 2.41 0.00 0 33 25 2 651.86353 1302.71977 3.52 54.32 5389 5389 MS2 17/22 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 318 2.41 0.00 0 15 25 2 639.35632 1277.70537 -3.65 42.99 5166 5166 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 285 2.41 0.00 0 20 25 2 639.35779 1277.70830 -1.36 48.39 5850 5850 MS2 18/20 Linfeng_091311_rIgG_2.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 2.41 0.00 0 20 100 2 571.26508 1141.52287 3.01 28.73 2384 2384 MS2 11/16 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 426 2.41 0.00 0 47 25 2 651.86292 1302.71855 2.58 54.75 5895 5895 MS2 18/22 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.40 0.00 0 40 25 2 651.86279 1302.71831 2.39 45.03 4464 4464 MS2 15/22 Linfeng_122411_rIgG_9.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 396 2.40 0.00 0 51 25 2 590.30609 1179.60491 3.76 54.53 6571 6571 MS2 15/18 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.40 0.00 0 37 25 2 651.86359 1302.71990 3.61 48.19 4704 4704 MS2 17/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.40 0.00 0 21 25 2 651.86096 1302.71465 -0.42 48.24 5728 5728 MS2 17/22 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 307 2.40 0.00 0 19 25 2 639.35767 1277.70806 -1.55 50.47 6111 6111 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.40 0.00 0 29 25 2 651.86041 1302.71355 -1.26 45.84 5428 5428 MS2 18/22 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 488 2.40 0.00 0 36 100 2 692.35120 1383.69512 3.44 2.12 431 431 MS2 16/22 Linfeng_20120130_CHD1_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 275 2.40 0.00 0 17 25 2 639.36017 1277.71306 2.37 46.17 4859 4859 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 287 2.39 0.00 0 15 25 2 639.35754 1277.70781 -1.74 46.95 5593 5593 MS2 18/20 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 760 2.39 0.00 0 23 100 2 487.27008 973.53288 1.60 29.31 2621 2621 MS2 13/14 Linfeng_20120130_CHD1_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 272 2.39 0.00 0 25 25 2 639.35858 1277.70989 -0.11 55.69 6680 6680 MS2 18/20 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.39 0.00 0 12 25 2 590.30566 1179.60405 3.04 27.22 1946 1946 MS2 13/18 Linfeng_122411_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 297 2.38 0.00 0 27 25 2 639.35687 1277.70647 -2.79 40.79 4787 4787 MS2 18/20 Linfeng_091311_rIgG_9.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 328 2.38 0.00 0 49 25 2 639.36115 1277.71501 3.90 42.71 4418 4418 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 310 2.38 0.00 0 29 25 2 639.35852 1277.70976 -0.21 52.38 6257 6257 MS2 18/20 Linfeng_091311_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 381 2.37 0.00 0 51 25 2 590.30542 1179.60356 2.62 29.99 2414 2414 MS2 15/18 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 304 2.37 0.00 0 27 25 2 639.35663 1277.70598 -3.17 39.76 4747 4747 MS2 18/20 Linfeng_091311_rIgG_8.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 414 2.37 0.00 0 44 25 2 590.30566 1179.60405 3.04 51.33 5077 5077 MS2 13/18 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 320 2.37 0.00 0 21 25 2 639.35687 1277.70647 -2.79 40.82 4884 4884 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 261 2.37 0.00 0 19 25 2 639.35907 1277.71086 0.65 54.41 6456 6456 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.37 0.00 0 28 25 2 651.86389 1302.72051 4.08 54.02 5857 5857 MS2 18/22 Linfeng_122411_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 290 2.36 0.00 0 33 25 2 633.32104 1265.63481 -1.93 28.88 3284 3284 MS2 17/20 Linfeng_091311_rIgG_3.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 289 2.36 0.00 0 37 100 2 571.26532 1141.52336 3.44 26.14 1903 1903 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 312 2.36 0.00 0 43 25 2 639.35870 1277.71013 0.08 56.85 6536 6536 MS2 18/20 Linfeng_091311_rIgG_6.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.36 0.00 0 35 100 2 533.26569 1065.52410 2.76 16.62 1360 1360 MS2 13/16 Linfeng_20120130_CHD1_8.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.36 0.00 0 57 25 2 651.86414 1302.72099 4.45 51.72 5555 5555 MS2 17/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 303 2.36 0.00 0 30 25 2 639.35736 1277.70745 -2.02 40.48 4785 4785 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 288 2.36 0.00 0 12 25 2 639.36047 1277.71367 2.85 45.12 4725 4725 MS2 18/20 Linfeng_122411_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 417 2.35 0.00 0 63 25 2 651.86334 1302.71941 3.24 56.43 5818 5818 MS2 14/22 Linfeng_122411_rIgG_9.raw High SLVNLGGSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 616 2.35 0.00 0 6 100 2 437.75421 874.50115 2.11 23.42 1541 1541 MS2 11/16 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.35 0.00 0 84 25 2 651.86334 1302.71941 3.24 53.13 5726 5726 MS2 16/22 Linfeng_122411_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 489 2.35 0.00 0 37 25 2 651.86047 1302.71367 -1.17 45.66 5505 5505 MS2 18/22 Linfeng_091311_rIgG_2.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 654 2.35 0.00 0 10 100 2 517.26349 1033.51970 3.50 21.92 1457 1457 MS2 12/16 Linfeng_20120130_CHD1_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 333 2.34 0.00 0 12 25 2 639.35901 1277.71074 0.56 53.47 6470 6470 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 2.34 0.00 0 14 25 2 639.35815 1277.70903 -0.78 44.89 5334 5334 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 468 2.34 0.00 0 30 100 2 692.35046 1383.69365 2.38 1.19 193 193 MS2 18/22 Linfeng_20120130_CHD1_7.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 474 2.34 0.00 0 42 100 2 692.35144 1383.69560 3.79 1.67 299 299 MS2 14/22 Linfeng_20120130_CHD1_6.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.33 0.00 0 59 25 2 590.30365 1179.60002 -0.38 47.33 5717 5717 MS2 16/18 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 563 2.33 0.00 2 5 100 2 654.83331 1308.65935 3.86 17.48 1151 1151 MS2 13/18 Linfeng_20120130_CHD1_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 416 2.33 0.00 0 41 25 2 651.86334 1302.71941 3.24 44.98 4816 4816 MS2 17/22 Linfeng_122411_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 259 2.32 0.00 0 41 25 2 639.35974 1277.71221 1.70 52.81 6214 6214 MS2 16/20 Linfeng_091311_rIgG_6.raw High SLNNQFASFIDKVR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.32 0.00 1 6 25 2 819.93597 1638.86467 2.91 37.40 3862 3862 MS2 14/26 Linfeng_122411_rIgG_4.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.32 0.00 0 8 17 2 571.26392 1141.52056 0.98 4.51 501 501 MS2 13/16 Linfeng_122411_rIgG_10.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 748 2.32 0.00 0 37 100 2 487.27011 973.53295 1.66 29.29 2488 2488 MS2 12/14 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 311 2.32 0.00 0 32 25 2 639.35919 1277.71111 0.84 51.45 6234 6234 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.32 0.00 0 42 25 2 651.86316 1302.71904 2.96 45.94 4830 4830 MS2 18/22 Linfeng_122411_rIgG_2.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 648 2.32 0.00 0 28 100 2 517.26270 1033.51811 1.97 22.08 1522 1522 MS2 13/16 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 413 2.31 0.00 0 43 25 2 590.30219 1179.59709 -2.86 29.44 3396 3396 MS2 17/18 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 374 2.31 0.00 0 0 25 2 590.30847 1179.60967 7.80 54.22 6439 6439 MS2 15/18 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 575 2.31 0.00 0 45 100 2 651.86060 1302.71391 -0.98 48.86 7334 7334 MS2 15/22 Linfeng_20120130_CHD1_5.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 304 2.31 0.00 0 31 25 2 692.34570 1383.68413 -4.50 42.13 4988 4988 MS2 16/22 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.31 0.00 0 38 25 2 651.86346 1302.71965 3.42 50.24 4952 4952 MS2 16/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.31 0.00 0 30 25 2 651.86206 1302.71684 1.27 53.69 5840 5840 MS2 17/22 Linfeng_122411_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 498 2.30 0.00 0 11 25 2 651.86053 1302.71379 -1.07 48.09 5738 5738 MS2 18/22 Linfeng_091311_rIgG_4.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 480 2.30 0.00 0 18 100 2 533.26624 1065.52519 3.79 16.66 1395 1395 MS2 12/16 Linfeng_20120130_CHD1_10.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 574 2.30 0.00 1 15 25 2 473.25266 945.49803 -2.12 2.93 274 274 MS2 13/16 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 280 2.30 0.00 0 12 25 2 639.35773 1277.70818 -1.45 49.00 5854 5854 MS2 18/20 Linfeng_091311_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 542 2.29 0.00 0 8 100 2 517.26379 1033.52031 4.09 22.18 1391 1391 MS2 12/16 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 399 2.29 0.00 0 44 25 2 651.86090 1302.71453 -0.51 49.23 5713 5713 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 411 2.29 0.00 0 41 25 2 651.86334 1302.71941 3.24 51.26 5069 5069 MS2 17/22 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 368 2.29 0.00 0 39 25 2 639.35791 1277.70854 -1.16 46.09 5489 5489 MS2 18/20 Linfeng_091311_rIgG_3.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 229 2.28 0.00 0 38 25 2 563.27606 1125.54485 2.28 20.49 1498 1498 MS2 14/18 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.28 0.00 0 44 25 2 590.30591 1179.60454 3.45 52.61 5216 5216 MS2 15/18 Linfeng_122411_rIgG_7.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 191 2.28 0.00 0 15 25 2 546.75482 1092.50237 -0.50 6.21 522 522 MS2 18/26 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 256 2.28 0.00 0 20 25 2 639.35767 1277.70806 -1.55 51.78 6128 6128 MS2 17/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 410 2.28 0.00 0 55 25 2 651.86279 1302.71831 2.39 48.60 4916 4916 MS2 15/22 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 293 2.27 0.00 0 30 25 2 639.35992 1277.71257 1.99 53.85 6301 6301 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 369 2.27 0.00 0 16 25 2 639.35797 1277.70867 -1.07 58.32 6740 6740 MS2 18/20 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 403 2.27 0.00 0 42 25 2 651.86420 1302.72112 4.55 55.44 5513 5513 MS2 18/22 Linfeng_122411_rIgG_7.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 601 2.27 0.00 0 74 100 2 590.30444 1179.60161 0.97 31.27 3038 3038 MS2 15/18 Linfeng_20120130_CHD1_5.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 639 2.27 0.00 0 11 100 2 517.26300 1033.51872 2.56 18.73 1211 1211 MS2 12/16 Linfeng_20120130_CHD1_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 455 2.26 0.00 0 42 100 2 692.35089 1383.69451 3.00 0.90 128 128 MS2 13/22 Linfeng_20120130_CHD1_8.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 546 2.26 0.00 1 13 100 2 762.40137 1523.79546 4.43 40.64 4338 4338 MS2 12/22 Linfeng_20120130_CHD1_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 436 2.26 0.00 0 0 1 2 639.35822 1277.70915 -0.69 48.57 6280 6280 MS2 14/20 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.26 0.00 0 55 25 2 651.86304 1302.71880 2.77 47.18 4577 4577 MS2 17/22 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 286 2.26 0.00 0 74 25 2 639.35742 1277.70757 -1.93 54.71 6487 6487 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 293 2.25 0.00 0 25 25 2 639.35925 1277.71123 0.94 57.30 6896 6896 MS2 16/20 Linfeng_091311_rIgG_8.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 284 2.25 0.00 0 27 100 2 571.26508 1141.52287 3.01 28.74 2387 2387 MS2 12/16 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 439 2.25 0.00 0 25 25 2 590.30615 1179.60503 3.86 54.90 5454 5454 MS2 14/18 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 279 2.25 0.00 0 16 25 2 639.35895 1277.71062 0.46 52.47 6357 6357 MS2 18/20 Linfeng_091311_rIgG_2.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.25 0.00 0 16 100 2 692.35168 1383.69609 4.14 2.22 456 456 MS2 14/22 Linfeng_20120130_CHD1_8.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High DVDGAYMTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 57 2.24 0.00 0 22 16 2 500.22647 999.44567 0.44 3.31 321 321 MS2 14/16 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 275 2.24 0.00 0 0 25 2 639.35962 1277.71196 1.51 56.70 6776 6776 MS2 17/20 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 28 100 2 487.27078 973.53429 3.04 26.18 1743 1743 MS2 12/14 Linfeng_20120130_CHD1_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 302 2.24 0.00 0 23 25 2 639.35834 1277.70940 -0.50 44.99 5351 5351 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 356 2.24 0.00 0 49 25 2 639.35797 1277.70867 -1.07 47.18 5697 5697 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 301 2.23 0.00 0 23 25 2 639.35815 1277.70903 -0.78 50.01 5982 5982 MS2 18/20 Linfeng_091311_rIgG_4.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 343 2.23 0.00 0 25 25 2 633.32349 1265.63970 1.92 27.97 1999 1999 MS2 12/20 Linfeng_122411_rIgG_1.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.23 0.00 0 12 25 2 651.86023 1302.71318 -1.54 45.86 5457 5457 MS2 18/22 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.23 0.00 0 22 25 2 639.35846 1277.70964 -0.30 57.44 6712 6712 MS2 18/20 Linfeng_091311_rIgG_4.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 277 2.23 0.00 0 29 100 2 571.26465 1141.52202 2.26 28.85 2404 2404 MS2 13/16 Linfeng_20120130_CHD1_4.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 57 2.22 0.00 0 32 100 2 650.77051 1300.53374 3.10 34.38 3576 3576 MS2 12/18 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 466 2.22 0.00 0 43 25 2 651.86267 1302.71807 2.21 44.84 4689 4689 MS2 18/22 Linfeng_122411_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.22 0.00 0 9 25 2 639.35962 1277.71196 1.51 57.32 6664 6664 MS2 17/20 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 666 2.22 0.00 0 10 25 2 487.27020 973.53313 1.85 20.12 1734 1734 MS2 13/14 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 262 2.22 0.00 0 0 25 2 639.35907 1277.71086 0.65 56.30 6588 6588 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 291 2.22 0.00 0 34 25 2 639.35944 1277.71160 1.22 52.58 6256 6256 MS2 17/20 Linfeng_091311_rIgG_5.raw High NMQDMVEDYR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 57 2.22 0.00 0 28 100 2 650.77124 1300.53520 4.22 34.20 3705 3705 MS2 13/18 Linfeng_20120130_CHD1_10.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 277 2.21 0.00 0 31 25 2 639.36035 1277.71343 2.66 56.18 6442 6442 MS2 17/20 Linfeng_091311_rIgG_1.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 766 2.21 0.00 0 16 100 2 487.27078 973.53429 3.04 29.65 2109 2109 MS2 12/14 Linfeng_20120130_CHD1_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 304 2.21 0.00 0 24 25 2 639.35840 1277.70952 -0.40 51.13 6113 6113 MS2 16/20 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.20 0.00 0 45 25 2 590.30524 1179.60320 2.31 50.34 4965 4965 MS2 15/18 Linfeng_122411_rIgG_7.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 499 2.19 0.00 0 44 25 2 487.26721 973.52715 -4.30 27.89 3240 3240 MS2 13/14 Linfeng_091311_rIgG_10.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 405 2.19 0.00 0 37 25 2 651.86359 1302.71990 3.61 52.31 5181 5181 MS2 19/22 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 465 2.19 0.00 0 35 25 2 651.85864 1302.71001 -3.98 37.88 4510 4510 MS2 19/22 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 325 2.19 0.00 0 23 25 2 590.30341 1179.59953 -0.79 53.15 6432 6432 MS2 14/18 Linfeng_091311_rIgG_2.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 286 2.19 0.00 0 30 100 2 571.26501 1141.52275 2.90 28.69 2376 2376 MS2 13/16 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 375 2.19 0.00 0 44 25 2 651.86346 1302.71965 3.42 50.22 5452 5452 MS2 14/22 Linfeng_122411_rIgG_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.18 0.00 0 16 25 2 590.30444 1179.60161 0.97 53.14 6336 6336 MS2 14/18 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.18 0.00 0 10 25 2 639.36121 1277.71514 3.99 52.03 6131 6131 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.18 0.00 0 20 25 2 639.35944 1277.71160 1.22 56.43 6637 6637 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 319 2.17 0.00 0 29 25 2 639.35858 1277.70989 -0.11 51.12 6119 6119 MS2 18/20 Linfeng_091311_rIgG_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 443 2.17 0.00 0 31 25 2 651.86267 1302.71807 2.21 57.93 6665 6665 MS2 17/22 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 290 2.17 0.00 0 20 25 2 639.35767 1277.70806 -1.55 57.91 6613 6613 MS2 17/20 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 487 2.17 0.00 0 10 25 2 651.86066 1302.71404 -0.89 48.03 5805 5805 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 306 2.17 0.00 0 10 25 2 639.35754 1277.70781 -1.74 45.33 5363 5363 MS2 18/20 Linfeng_091311_rIgG_6.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 121 2.16 0.00 0 20 14 2 571.26123 1141.51518 -3.73 28.68 2982 2982 MS2 14/16 Linfeng_091311_rIgG_1.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 124 2.16 0.00 0 47 25 2 571.26196 1141.51665 -2.45 28.76 3249 3249 MS2 13/16 Linfeng_091311_rIgG_6.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 160 2.16 0.00 0 40 25 2 571.26526 1141.52324 3.33 25.92 2230 2230 MS2 14/16 Linfeng_122411_rIgG_3.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 682 2.16 0.00 0 9 100 2 517.26282 1033.51836 2.20 21.97 1436 1436 MS2 12/16 Linfeng_20120130_CHD1_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 663 2.16 0.00 0 6 100 2 517.26349 1033.51970 3.50 22.28 1487 1487 MS2 12/16 Linfeng_20120130_CHD1_1.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 153 2.15 0.00 0 16 23 2 571.26349 1141.51970 0.23 25.59 2430 2430 MS2 13/16 Linfeng_122411_rIgG_5.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 296 2.15 0.00 0 49 25 2 639.35779 1277.70830 -1.36 48.47 5758 5758 MS2 15/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 530 2.14 0.00 2 0 100 2 654.83240 1308.65752 2.46 17.66 1131 1131 MS2 13/18 Linfeng_20120130_CHD1_4.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 407 2.13 0.00 0 60 25 2 590.30450 1179.60173 1.07 52.06 6311 6311 MS2 15/18 Linfeng_091311_rIgG_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 422 2.13 0.00 0 14 25 2 651.86084 1302.71440 -0.61 49.46 5912 5912 MS2 18/22 Linfeng_091311_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 425 2.13 0.00 0 4 0 2 517.26154 1033.51579 -0.28 3.75 406 406 MS2 13/16 Linfeng_122411_rIgG_4.raw High SISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 398 2.13 0.00 0 21 100 2 416.74963 832.49199 3.92 27.40 1836 1836 MS2 10/14 Linfeng_20120130_CHD1_3.raw High LNDLEDALQQAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 420 2.13 0.00 0 11 15 2 679.35065 1357.69402 -1.35 4.00 406 406 MS2 15/22 Linfeng_122411_rIgG_7.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 460 2.13 0.00 0 43 100 2 533.26538 1065.52349 2.19 18.18 1169 1169 MS2 12/16 Linfeng_20120130_CHD1_4.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 468 2.13 0.00 0 42 100 2 692.34979 1383.69231 1.41 1.00 152 152 MS2 16/22 Linfeng_20120130_CHD1_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 436 2.13 0.00 0 41 25 2 651.86023 1302.71318 -1.54 45.68 5259 5259 MS2 18/22 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 288 2.12 0.00 0 14 25 2 639.35980 1277.71233 1.80 53.20 6322 6322 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 272 2.12 0.00 0 40 25 2 639.35919 1277.71111 0.84 55.41 6551 6551 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 300 2.12 0.00 0 7 25 2 639.35687 1277.70647 -2.79 42.02 4951 4951 MS2 18/20 Linfeng_091311_rIgG_6.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 655 2.12 0.00 0 30 100 2 517.26343 1033.51958 3.38 22.01 1517 1517 MS2 12/16 Linfeng_20120130_CHD1_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 378 2.12 0.00 0 48 25 2 590.30554 1179.60381 2.83 48.00 4679 4679 MS2 15/18 Linfeng_122411_rIgG_7.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 477 2.12 0.00 0 48 25 2 651.85907 1302.71086 -3.32 37.84 4451 4451 MS2 17/22 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 395 2.12 0.00 0 61 25 2 590.30420 1179.60112 0.55 50.21 6007 6007 MS2 16/18 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 621 2.11 0.00 0 6 25 2 487.27039 973.53349 2.22 21.13 1853 1853 MS2 13/14 Linfeng_122411_rIgG_5.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.11 0.00 0 7 100 2 533.26605 1065.52483 3.45 16.47 1083 1083 MS2 12/16 Linfeng_20120130_CHD1_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 293 2.11 0.00 0 28 25 2 639.35883 1277.71037 0.27 50.99 6039 6039 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 267 2.10 0.00 0 46 25 2 639.35687 1277.70647 -2.79 58.93 6679 6679 MS2 15/20 Linfeng_091311_rIgG_7.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 756 2.10 0.00 0 21 100 2 487.27078 973.53429 3.04 29.47 2174 2174 MS2 13/14 Linfeng_20120130_CHD1_2.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 400 2.10 0.00 0 44 25 2 651.86383 1302.72038 3.99 55.39 5506 5506 MS2 14/22 Linfeng_122411_rIgG_7.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 459 2.10 0.00 0 33 25 2 517.26166 1033.51604 -0.04 4.82 545 545 MS2 13/16 Linfeng_122411_rIgG_6.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 4 12 2 487.26746 973.52764 -3.80 27.83 2867 2867 MS2 13/14 Linfeng_091311_rIgG_1.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 284 2.10 0.00 0 79 25 2 639.35693 1277.70659 -2.69 49.98 5932 5932 MS2 14/20 Linfeng_091311_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 297 2.10 0.00 0 19 25 2 639.35889 1277.71050 0.36 48.09 5740 5740 MS2 16/20 Linfeng_091311_rIgG_3.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 387 2.09 0.00 0 38 25 2 651.86420 1302.72112 4.55 55.34 5690 5690 MS2 16/22 Linfeng_122411_rIgG_9.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 134 2.09 0.00 0 7 25 2 571.26184 1141.51641 -2.66 28.57 3235 3235 MS2 13/16 Linfeng_091311_rIgG_4.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 130 2.09 0.00 0 13 25 2 571.26196 1141.51665 -2.45 28.54 3237 3237 MS2 13/16 Linfeng_091311_rIgG_3.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 299 2.09 0.00 0 47 25 2 639.35938 1277.71147 1.13 56.89 6527 6527 MS2 15/20 Linfeng_091311_rIgG_7.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 768 2.09 0.00 0 34 100 2 487.27063 973.53398 2.72 29.18 2375 2375 MS2 13/14 Linfeng_20120130_CHD1_1.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 451 2.08 0.00 0 69 25 2 590.30365 1179.60002 -0.38 31.91 3679 3679 MS2 15/18 Linfeng_091311_rIgG_4.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 165 2.08 0.00 0 10 25 2 546.75305 1092.49883 -3.74 12.77 1068 1068 MS2 15/26 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 402 2.08 0.00 0 58 25 2 651.86371 1302.72014 3.80 50.42 5394 5394 MS2 16/22 Linfeng_122411_rIgG_2.raw High DVDGAYMTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 76 2.07 0.00 0 27 25 2 500.22485 999.44243 -2.79 21.83 2052 2052 MS2 12/16 Linfeng_091311_rIgG_1.raw High LLRDYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 511 2.07 0.00 1 21 100 2 762.40094 1523.79460 3.87 40.83 4846 4846 MS2 12/22 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.07 0.00 0 33 25 2 651.86304 1302.71880 2.77 54.61 6291 6291 MS2 16/22 Linfeng_122411_rIgG_5.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 507 2.07 0.00 0 6 25 2 517.26324 1033.51921 3.03 13.81 1124 1124 MS2 13/16 Linfeng_122411_rIgG_6.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 270 2.07 0.00 0 9 25 2 639.35895 1277.71062 0.46 53.39 6361 6361 MS2 18/20 Linfeng_091311_rIgG_4.raw High AEAESLYQSK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 211 2.07 0.00 0 77 25 2 563.27271 1125.53813 -3.69 21.51 2009 2009 MS2 14/18 Linfeng_091311_rIgG_1.raw High SLNNQFASFIDK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 438 2.06 0.00 0 37 100 2 692.35101 1383.69475 3.17 0.86 119 119 MS2 15/22 Linfeng_20120130_CHD1_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 316 2.06 0.00 0 77 25 2 639.36060 1277.71391 3.04 56.29 6795 6795 MS2 17/20 Linfeng_091311_rIgG_8.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 295 2.06 0.00 0 49 25 2 639.35779 1277.70830 -1.36 43.56 5135 5135 MS2 17/20 Linfeng_091311_rIgG_7.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 547 2.06 0.00 0 18 100 2 633.32452 1265.64177 3.56 30.78 2959 2959 MS2 14/20 Linfeng_20120130_CHD1_10.raw High SEIDNVKK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 577 2.06 0.00 1 22 25 2 466.75525 932.50322 -1.67 14.79 1338 1338 MS2 12/14 Linfeng_091311_rIgG_6.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 423 2.06 0.00 0 54 25 2 651.86328 1302.71929 3.14 52.30 6008 6008 MS2 15/22 Linfeng_122411_rIgG_5.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.05 0.00 0 51 25 2 590.30640 1179.60552 4.28 52.00 5655 5655 MS2 13/18 Linfeng_122411_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 628 2.05 0.00 0 5 6 2 487.27060 973.53392 2.66 23.88 1993 1993 MS2 13/14 Linfeng_122411_rIgG_2.raw High DYQELMNTK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 134 2.05 0.00 0 30 25 2 571.26208 1141.51689 -2.23 28.78 3200 3200 MS2 12/16 Linfeng_091311_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 431 2.05 0.00 0 26 25 2 651.86261 1302.71794 2.11 45.26 4898 4898 MS2 17/22 Linfeng_122411_rIgG_6.raw High DYQELmNTK Unambiguous 1 1 IPI00220327.4 M6(Oxidation) CID 1.0000 0.0000 1 1 162 2.04 0.00 0 6 100 2 579.26233 1157.51738 2.61 18.82 1218 1218 MS2 13/16 Linfeng_20120130_CHD1_4.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 217 2.04 0.00 0 35 25 2 533.26288 1065.51848 -2.51 20.81 2171 2171 MS2 14/16 Linfeng_091311_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 319 2.04 0.00 0 27 25 2 590.30334 1179.59941 -0.90 49.87 6036 6036 MS2 13/18 Linfeng_091311_rIgG_2.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 418 2.04 0.00 0 51 25 2 590.30585 1179.60442 3.35 53.76 5330 5330 MS2 13/18 Linfeng_122411_rIgG_7.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 328 2.04 0.00 0 32 25 2 639.36115 1277.71501 3.90 49.09 5866 5866 MS2 16/20 Linfeng_091311_rIgG_3.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 658 2.03 0.00 0 31 25 2 487.27039 973.53349 2.22 19.09 1617 1617 MS2 13/14 Linfeng_122411_rIgG_5.raw High SLDLDSIIAEVK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 393 2.03 0.00 0 26 25 2 651.86383 1302.72038 3.99 55.30 5986 5986 MS2 14/22 Linfeng_122411_rIgG_4.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 424 2.03 0.00 0 17 25 2 517.26038 1033.51348 -2.52 22.83 2414 2414 MS2 13/16 Linfeng_091311_rIgG_9.raw High DVDGAYmTK Unambiguous 1 1 IPI00220327.4 M7(Oxidation) CID 1.0000 0.0000 1 1 126 2.03 0.00 0 15 100 2 508.22519 1015.44310 2.92 14.11 905 905 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LALDLEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 1 290 2.03 0.00 0 0 25 2 639.35925 1277.71123 0.94 53.58 6373 6373 MS2 16/20 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 559 2.02 0.00 0 1 5 2 487.26843 973.52959 -1.79 4.39 464 464 MS2 12/14 Linfeng_122411_rIgG_8.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 445 2.02 0.00 0 4 1 2 517.26154 1033.51579 -0.28 3.39 332 332 MS2 13/16 Linfeng_122411_rIgG_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 380 2.02 0.00 0 6 25 2 487.26999 973.53270 1.41 26.44 2500 2500 MS2 13/14 Linfeng_122411_rIgG_6.raw High TNAENEFVTIK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 531 2.02 0.00 0 15 100 2 633.32495 1265.64263 4.24 28.70 2109 2109 MS2 11/20 Linfeng_20120130_CHD1_9.raw High LLRDYQELmNTK Unambiguous 1 1 IPI00220327.4 M9(Oxidation) CID 1.0000 0.0000 1 1 518 2.01 0.00 1 31 100 2 770.39551 1539.78374 0.08 28.16 2391 2391 MS2 14/22 Linfeng_20120130_CHD1_5.raw High TLLEGEESR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 528 2.01 0.00 0 10 25 2 517.26349 1033.51970 3.50 21.79 1765 1765 MS2 12/16 Linfeng_122411_rIgG_2.raw High AQYEDIAQK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 450 2.01 0.00 0 23 100 2 533.26617 1065.52507 3.68 18.32 1145 1145 MS2 12/16 Linfeng_20120130_CHD1_2.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 689 2.01 0.00 0 15 25 2 487.27081 973.53435 3.10 24.52 2045 2045 MS2 13/14 Linfeng_122411_rIgG_3.raw High YEELQITAGR Unambiguous 2 1 IPI00220327.4 CID 1.0000 0.0000 1 1 444 2.01 0.00 0 24 25 2 590.30402 1179.60076 0.24 51.31 6141 6141 MS2 15/18 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.01 0.00 0 11 25 2 487.26993 973.53258 1.28 22.16 1982 1982 MS2 13/14 Linfeng_122411_rIgG_5.raw High GENALKDAK Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 435 2.01 0.00 1 42 25 2 473.25360 945.49993 -0.12 11.66 945 945 MS2 13/16 Linfeng_091311_rIgG_6.raw High GSGGGSSGGSIGGR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 191 2.00 0.00 0 14 25 2 546.75446 1092.50163 -1.17 14.84 1316 1316 MS2 14/26 Linfeng_091311_rIgG_4.raw High IEISELNR Unambiguous 2 2 IPI00220327.4;IPI00021304.1 CID 1.0000 0.0000 1 1 416 2.00 0.00 0 39 25 2 487.26990 973.53252 1.22 25.03 2255 2255 MS2 13/14 Linfeng_122411_rIgG_4.raw High SISISVAR Unambiguous 1 1 IPI00220327.4 CID 1.0000 0.0000 1 1 364 2.00 0.00 0 35 100 2 416.74933 832.49138 3.18 27.41 1944 1944 MS2 12/14 Linfeng_20120130_CHD1_9.raw IPI00026272.2 Histone H2A type 1-B/E 63.08 3 3 10 217 153.21 30.77 5 48 345.94 63.08 9 105 248.29 49.23 4 64 130 14.1 11.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 193 6.57 0.00 0 0 29 3 972.53369 2915.58652 -0.45 48.90 6851 6851 MS2 38/112 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 184 6.54 0.00 0 1 21 3 972.53473 2915.58963 0.62 48.88 5622 5622 MS2 38/112 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 197 6.35 0.00 0 10 68 3 972.53247 2915.58286 -1.71 49.16 6962 6962 MS2 40/112 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 6.11 0.00 0 0 84 3 972.53345 2915.58579 -0.70 48.93 6934 6934 MS2 38/112 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 153 6.03 0.00 0 0 100 2 1458.29651 2915.58574 -0.72 48.89 6849 6849 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 153 5.91 0.00 0 0 100 2 1458.29980 2915.59233 1.54 49.10 6890 6890 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 163 5.78 0.00 0 75 100 2 1458.29565 2915.58403 -1.30 48.88 5623 5623 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 111 5.62 0.00 0 3 25 3 972.53668 2915.59549 2.63 56.94 4866 4866 MS2 37/112 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 155 5.55 0.00 0 0 94 2 1458.29504 2915.58281 -1.72 48.95 6936 6936 MS2 26/56 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 152 5.53 0.00 0 0 76 2 1458.29810 2915.58891 0.37 48.92 6855 6855 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 200 5.48 0.00 0 8 100 3 972.53320 2915.58506 -0.95 49.33 5703 5703 MS2 40/112 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 157 5.38 0.00 0 0 100 2 1458.29468 2915.58208 -1.97 49.22 5684 5684 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 149 5.37 0.00 0 0 100 2 1458.29883 2915.59038 0.87 49.13 5670 5670 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 150 5.36 0.00 0 0 100 2 1458.29626 2915.58525 -0.88 48.99 6942 6942 MS2 26/56 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 187 5.29 0.00 0 17 100 4 729.65271 2915.58901 0.40 48.94 6861 6861 MS2 43/168 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 110 5.22 0.00 0 11 25 4 729.65460 2915.59658 3.00 56.95 4867 4867 MS2 53/168 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 181 5.21 0.00 0 0 100 3 972.53534 2915.59146 1.25 49.53 5731 5731 MS2 35/112 Linfeng_20120130_CHD1_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 5.16 0.00 0 0 100 2 966.08771 1931.16814 -0.40 49.22 6911 6911 MS2 23/36 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 5.12 0.00 0 7 87 4 729.65198 2915.58608 -0.60 48.91 5628 5628 MS2 47/168 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 193 5.05 0.00 0 24 100 3 972.53363 2915.58634 -0.51 49.04 5468 5468 MS2 34/112 Linfeng_20120130_CHD1_7.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 118 4.94 0.00 0 29 25 4 729.65344 2915.59194 1.41 57.26 6002 6002 MS2 44/168 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 4.92 0.00 0 12 99 4 729.65228 2915.58730 -0.18 48.96 6865 6865 MS2 44/168 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 4.83 0.00 0 0 38 2 966.08698 1931.16667 -1.16 48.64 6786 6786 MS2 21/36 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.79 0.00 0 5 25 4 483.54880 1931.17336 2.30 44.25 4524 4524 MS2 49/108 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.77 0.00 0 10 25 4 483.54861 1931.17263 1.92 43.83 4430 4430 MS2 54/108 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 2 25 3 644.39636 1931.17453 2.91 52.18 5464 5464 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.68 0.00 0 24 25 3 644.39594 1931.17325 2.25 43.60 4400 4400 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 4.67 0.00 0 6 100 2 966.09125 1931.17522 3.27 11.33 717 717 MS2 19/36 Linfeng_20120130_CHD1_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.65 0.00 0 7 25 3 644.39673 1931.17563 3.48 47.06 4841 4841 MS2 36/72 Linfeng_122411_rIgG_10.raw High LLGRVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 6 4.61 0.00 1 23 25 3 790.81982 2370.44492 -6.21 49.31 6023 6023 MS2 40/88 Linfeng_091311_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 201 4.58 0.00 0 28 100 3 972.53320 2915.58506 -0.95 49.01 5464 5464 MS2 33/112 Linfeng_20120130_CHD1_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.57 0.00 0 11 25 3 644.39423 1931.16812 -0.41 48.54 5927 5927 MS2 36/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.57 0.00 0 2 25 3 644.39661 1931.17527 3.29 44.66 4534 4534 MS2 35/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.56 0.00 0 5 25 3 644.39642 1931.17472 3.01 46.02 4708 4708 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.55 0.00 0 8 25 3 644.39746 1931.17783 4.62 43.91 4321 4321 MS2 33/72 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.52 0.00 0 6 19 2 966.09058 1931.17388 2.57 46.87 6387 6387 MS2 20/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.51 0.00 0 11 25 4 483.54669 1931.16494 -2.06 45.52 5543 5543 MS2 50/108 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.50 0.00 0 11 25 3 644.39447 1931.16886 -0.03 45.48 5376 5376 MS2 41/72 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.49 0.00 0 4 25 3 644.39606 1931.17362 2.44 44.03 4178 4178 MS2 35/72 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.47 0.00 0 8 25 3 644.39685 1931.17600 3.67 44.08 4593 4593 MS2 38/72 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.46 0.00 0 8 25 3 644.39355 1931.16611 -1.45 45.40 5399 5399 MS2 39/72 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.44 0.00 0 27 25 3 644.39667 1931.17545 3.39 56.29 5915 5915 MS2 36/72 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 131 4.40 0.00 2 25 25 3 711.40387 2132.19706 1.64 34.64 3252 3252 MS2 36/68 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.40 0.00 0 5 25 3 644.39618 1931.17398 2.63 48.07 4970 4970 MS2 32/72 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 117 4.37 0.00 0 17 25 4 729.65350 2915.59218 1.49 57.24 5691 5691 MS2 47/168 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.33 0.00 0 23 100 2 966.09174 1931.17620 3.77 1.49 257 257 MS2 19/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.32 0.00 0 11 25 3 644.39618 1931.17398 2.63 44.07 4501 4501 MS2 36/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.29 0.00 0 4 25 3 644.39386 1931.16703 -0.98 45.22 5379 5379 MS2 37/72 Linfeng_091311_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.28 0.00 0 5 25 3 644.39636 1931.17453 2.91 51.15 5343 5343 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.27 0.00 0 13 11 3 644.39471 1931.16959 0.35 44.02 4951 4951 MS2 37/72 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 130 4.23 0.00 2 3 11 4 533.80487 2132.19765 1.92 34.57 3244 3244 MS2 33/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.23 0.00 0 24 25 3 644.39587 1931.17307 2.15 43.84 4717 4717 MS2 33/72 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.23 0.00 0 6 100 2 966.09192 1931.17656 3.96 11.51 1045 1045 MS2 16/36 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.22 0.00 0 30 25 3 644.39270 1931.16355 -2.78 45.44 5472 5472 MS2 38/72 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 4 25 2 966.09082 1931.17436 2.82 44.08 4184 4184 MS2 22/36 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 2 25 2 966.09119 1931.17510 3.20 46.06 4713 4713 MS2 21/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.17 0.00 0 5 17 3 644.39270 1931.16355 -2.78 45.12 5188 5188 MS2 35/72 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.17 0.00 0 4 25 3 644.39673 1931.17563 3.48 49.11 5101 5101 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.11 0.00 0 29 25 3 644.39398 1931.16739 -0.79 45.18 5500 5500 MS2 37/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.11 0.00 0 14 100 2 966.09296 1931.17864 5.04 11.24 699 699 MS2 21/36 Linfeng_20120130_CHD1_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.10 0.00 0 36 25 3 644.39435 1931.16849 -0.22 47.41 5785 5785 MS2 35/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.09 0.00 0 17 100 2 966.09271 1931.17815 4.78 46.83 5104 5104 MS2 16/36 Linfeng_20120130_CHD1_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.06 0.00 0 2 25 2 966.09186 1931.17644 3.90 44.00 4332 4332 MS2 22/36 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.06 0.00 0 27 25 3 644.39343 1931.16574 -1.64 45.55 5384 5384 MS2 37/72 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.06 0.00 0 3 25 3 644.39685 1931.17600 3.67 53.20 5578 5578 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.99 0.00 0 5 25 3 644.39655 1931.17508 3.20 50.13 5223 5223 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 22 3.98 0.00 0 8 25 3 644.39307 1931.16465 -2.21 45.32 5460 5460 MS2 36/72 Linfeng_091311_rIgG_2.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 187 3.98 0.00 0 5 100 4 729.65265 2915.58877 0.32 49.15 5675 5675 MS2 40/168 Linfeng_20120130_CHD1_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.96 0.00 0 6 25 2 966.09174 1931.17620 3.77 54.23 5685 5685 MS2 18/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.94 0.00 0 17 25 3 644.39386 1931.16703 -0.98 45.42 5364 5364 MS2 36/72 Linfeng_091311_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.94 0.00 0 17 100 2 966.08826 1931.16924 0.17 0.77 97 97 MS2 17/36 Linfeng_20120130_CHD1_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.91 0.00 0 17 25 3 644.39343 1931.16574 -1.64 45.38 5370 5370 MS2 35/72 Linfeng_091311_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.90 0.00 0 0 100 2 966.08801 1931.16875 -0.08 49.72 6985 6985 MS2 16/36 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 5 3.89 0.00 1 0 25 2 1030.13843 2059.26958 2.77 40.63 4017 4017 MS2 22/38 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.89 0.00 0 18 25 3 644.39539 1931.17160 1.39 44.06 4583 4583 MS2 37/72 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.88 0.00 0 5 25 3 644.39697 1931.17636 3.86 55.25 5788 5788 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.87 0.00 0 0 25 3 644.39404 1931.16758 -0.69 49.62 6062 6062 MS2 30/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.87 0.00 0 27 100 2 966.09088 1931.17449 2.89 0.84 106 106 MS2 20/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.84 0.00 0 50 25 3 644.39691 1931.17618 3.76 45.13 4632 4632 MS2 33/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.83 0.00 0 16 25 2 966.08679 1931.16631 -1.35 45.62 5393 5393 MS2 24/36 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.80 0.00 0 13 25 2 966.08539 1931.16350 -2.80 45.14 5191 5191 MS2 20/36 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.80 0.00 0 3 25 3 644.39661 1931.17527 3.29 54.22 5684 5684 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.80 0.00 0 1 25 2 966.09125 1931.17522 3.27 44.68 4536 4536 MS2 23/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.79 0.00 0 17 100 2 966.09167 1931.17607 3.71 1.81 327 327 MS2 17/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.79 0.00 0 16 25 2 966.09174 1931.17620 3.77 43.64 4405 4405 MS2 24/36 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 117 3.78 0.00 0 13 25 3 972.53644 2915.59476 2.38 57.25 5692 5692 MS2 31/112 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.77 0.00 0 3 25 2 966.09076 1931.17424 2.76 44.13 4509 4509 MS2 24/36 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.75 0.00 0 30 69 2 966.08923 1931.17119 1.18 1.93 379 379 MS2 15/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.74 0.00 0 12 25 2 966.08539 1931.16350 -2.80 45.54 5485 5485 MS2 23/36 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.73 0.00 0 8 25 2 966.09180 1931.17632 3.83 43.93 4729 4729 MS2 20/36 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.71 0.00 0 12 25 2 966.08685 1931.16643 -1.29 45.58 5388 5388 MS2 23/36 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 3.70 0.00 0 1 10 3 644.39294 1931.16428 -2.40 46.18 5628 5628 MS2 36/72 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 282 3.69 0.00 1 5 4 2 846.95844 1692.90959 3.99 3.11 277 277 MS2 20/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.69 0.00 0 21 100 2 966.09198 1931.17668 4.02 1.45 246 246 MS2 18/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.68 0.00 0 25 100 2 966.09119 1931.17510 3.20 1.49 265 265 MS2 16/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.67 0.00 0 2 25 2 966.09210 1931.17693 4.15 51.16 5344 5344 MS2 22/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.63 0.00 0 6 25 2 966.09161 1931.17595 3.65 44.13 4598 4598 MS2 21/36 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.60 0.00 0 28 25 2 966.08691 1931.16655 -1.22 45.49 5384 5384 MS2 23/36 Linfeng_091311_rIgG_6.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 3.56 0.00 1 18 25 3 564.97296 1692.90433 0.89 25.58 2051 2051 MS2 23/52 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 307 3.55 0.00 1 6 25 2 846.95795 1692.90862 3.42 24.71 1945 1945 MS2 21/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.55 0.00 0 33 100 2 966.08960 1931.17192 1.56 0.96 142 142 MS2 18/36 Linfeng_20120130_CHD1_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.51 0.00 0 22 25 3 644.39441 1931.16867 -0.12 50.80 6213 6213 MS2 26/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.48 0.00 0 18 25 4 483.54871 1931.17299 2.11 44.26 4207 4207 MS2 40/108 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.47 0.00 0 23 100 3 644.39502 1931.17051 0.83 48.81 6830 6830 MS2 22/72 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.43 0.00 0 11 25 4 483.54865 1931.17275 1.99 44.10 4345 4345 MS2 41/108 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.41 0.00 0 18 25 3 644.39667 1931.17545 3.39 43.73 4657 4657 MS2 31/72 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.39 0.00 0 31 100 2 966.09003 1931.17278 2.00 2.27 466 466 MS2 15/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.39 0.00 0 0 25 2 966.09052 1931.17375 2.51 48.08 4971 4971 MS2 19/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.38 0.00 0 37 25 3 644.39343 1931.16574 -1.64 58.33 6085 6085 MS2 28/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.36 0.00 0 30 25 2 966.08630 1931.16533 -1.85 46.59 5680 5680 MS2 18/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.34 0.00 0 6 25 2 966.09216 1931.17705 4.21 53.21 5579 5579 MS2 20/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 24 25 2 966.09277 1931.17827 4.85 55.32 5797 5797 MS2 17/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.28 0.00 0 14 25 2 966.09180 1931.17632 3.83 43.74 4659 4659 MS2 19/36 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.25 0.00 0 22 25 2 966.08600 1931.16472 -2.17 45.35 5522 5522 MS2 22/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.23 0.00 0 13 25 2 966.09106 1931.17485 3.08 44.20 4601 4601 MS2 21/36 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.18 0.00 0 28 25 3 644.39532 1931.17142 1.30 52.25 6382 6382 MS2 32/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.17 0.00 0 5 25 2 966.08673 1931.16619 -1.41 45.25 5383 5383 MS2 21/36 Linfeng_091311_rIgG_3.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 3.17 0.00 1 5 1 3 564.97400 1692.90744 2.72 3.08 272 272 MS2 24/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 871 3.11 0.00 0 47 100 2 472.77133 944.53539 4.35 37.30 4377 4377 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 3.11 0.00 0 12 66 2 472.77118 944.53508 4.02 36.32 4183 4183 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.09 0.00 0 31 25 2 966.09320 1931.17912 5.29 52.19 5465 5465 MS2 21/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 388 3.07 0.00 1 18 25 4 423.98187 1692.90566 1.67 24.37 2220 2220 MS2 30/78 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.05 0.00 0 51 25 2 966.08636 1931.16545 -1.79 45.42 5401 5401 MS2 21/36 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 2.99 0.00 0 6 25 2 966.09113 1931.17497 3.14 50.14 5225 5225 MS2 20/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.94 0.00 1 12 25 3 564.97351 1692.90598 1.86 24.93 2055 2055 MS2 24/52 Linfeng_122411_rIgG_8.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.92 0.00 1 33 25 3 564.97455 1692.90909 3.70 24.90 1901 1901 MS2 20/52 Linfeng_122411_rIgG_9.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 367 2.91 0.00 1 29 25 4 423.98151 1692.90420 0.81 25.70 2067 2067 MS2 31/78 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 2.91 0.00 0 28 25 3 644.39441 1931.16867 -0.12 53.31 6497 6497 MS2 29/72 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 877 2.90 0.00 0 10 3 2 472.77045 944.53362 2.47 35.32 3965 3965 MS2 14/16 Linfeng_20120130_CHD1_10.raw Medium VTIAQGGVLPNIQAVLLPKKTESHHK Unambiguous 8 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 40 2.89 0.00 2 13 25 4 695.40607 2778.60244 1.24 35.01 3299 3299 MS2 41/150 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 130 2.88 0.00 2 4 25 5 427.24536 2132.19770 1.94 34.59 3247 3247 MS2 45/136 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.84 0.00 0 0 25 2 966.09174 1931.17620 3.77 49.13 5103 5103 MS2 15/36 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 393 2.82 0.00 1 9 8 4 423.98175 1692.90517 1.38 3.27 290 290 MS2 24/78 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 857 2.81 0.00 0 53 41 2 472.77081 944.53435 3.25 46.98 6346 6346 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 368 2.81 0.00 1 27 25 4 423.98245 1692.90798 3.04 24.85 2046 2046 MS2 28/78 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 2.80 0.00 1 7 25 3 687.09113 2059.25882 -2.46 41.84 5079 5079 MS2 23/76 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 2.79 0.00 0 7 100 3 644.39368 1931.16648 -1.26 48.70 6804 6804 MS2 27/72 Linfeng_20120130_CHD1_10.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.79 0.00 1 14 25 4 515.57233 2059.26748 1.75 40.39 3987 3987 MS2 38/114 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.76 0.00 0 23 25 2 966.09180 1931.17632 3.83 47.10 4846 4846 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 885 2.76 0.00 0 5 6 2 472.77081 944.53435 3.25 34.30 3728 3728 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 2.74 0.00 0 42 25 2 966.08551 1931.16374 -2.68 45.35 5463 5463 MS2 19/36 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 887 2.74 0.00 0 36 100 2 472.77124 944.53520 4.15 33.30 3513 3513 MS2 13/16 Linfeng_20120130_CHD1_10.raw High NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 414 2.74 0.00 1 6 25 2 650.84711 1300.68694 1.01 30.36 2690 2690 MS2 18/20 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 891 2.73 0.00 0 42 100 2 472.77045 944.53362 2.47 33.90 3543 3543 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.66 0.00 0 70 25 2 966.08887 1931.17046 0.80 44.14 4967 4967 MS2 18/36 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.66 0.00 1 29 25 3 564.97375 1692.90671 2.29 26.63 2189 2189 MS2 20/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 2.65 0.00 0 49 100 2 472.77148 944.53569 4.67 37.25 4369 4369 MS2 13/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.64 0.00 0 49 25 2 966.09161 1931.17595 3.65 56.35 5923 5923 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 309 2.61 0.00 1 40 25 2 846.95709 1692.90691 2.41 26.01 2108 2108 MS2 14/26 Linfeng_122411_rIgG_10.raw High NDEELNKLLGR Unambiguous 3 1 IPI00026272.2 CID 1.0000 0.0000 1 1 418 2.58 0.00 1 14 25 2 650.84814 1300.68901 2.61 30.42 2609 2609 MS2 16/20 Linfeng_122411_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.58 0.00 0 5 38 2 425.76825 850.52922 4.05 32.27 3280 3280 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 864 2.55 0.00 0 40 27 2 472.77054 944.53380 2.67 46.89 6316 6316 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 888 2.49 0.00 0 34 100 2 472.77069 944.53411 2.99 37.41 4398 4398 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 362 2.48 0.00 1 6 4 3 564.97266 1692.90342 0.35 3.23 284 284 MS2 18/52 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.46 0.00 0 43 100 2 472.77115 944.53502 3.96 33.21 3493 3493 MS2 12/16 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.46 0.00 0 8 100 2 425.76828 850.52928 4.12 33.29 3510 3510 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.43 0.00 0 4 57 2 425.76822 850.52916 3.97 24.14 1953 1953 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.42 0.00 0 5 100 2 425.76797 850.52867 3.40 27.20 2365 2365 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.37 0.00 0 53 100 2 472.77075 944.53423 3.12 34.06 2886 2886 MS2 13/16 Linfeng_20120130_CHD1_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 867 2.35 0.00 0 40 100 2 472.76999 944.53270 1.50 34.07 3581 3581 MS2 12/16 Linfeng_20120130_CHD1_8.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 53 2.34 0.00 0 3 100 2 425.76758 850.52788 2.47 31.25 3052 3052 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 60 2.27 0.00 0 5 100 2 425.76846 850.52965 4.55 25.15 2069 2069 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.27 0.00 0 26 100 2 425.76752 850.52776 2.32 34.95 3877 3877 MS2 11/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.21 0.00 0 12 28 2 966.09015 1931.17302 2.13 46.93 6327 6327 MS2 12/36 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 61 2.17 0.00 0 3 100 2 425.76877 850.53026 5.27 28.21 2528 2528 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 49 2.16 0.00 0 7 100 2 425.76776 850.52825 2.90 26.18 2217 2217 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.08 0.00 0 7 100 2 425.76825 850.52922 4.05 34.30 3729 3729 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 62 2.01 0.00 0 20 100 2 425.76801 850.52873 3.47 23.12 1827 1827 MS2 11/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00216457.7 Histone H2A type 2-A 63.08 2 5 11 221 151.20 36.15 5 48 346.01 63.08 11 107 254.74 57.69 5 66 130 14.1 10.90 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 293 7.29 0.00 0 32 57 4 734.14136 2933.54360 -0.23 48.76 6627 6627 MS2 56/168 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 303 6.78 0.00 0 0 8 3 978.51953 2933.54404 -0.08 48.75 6625 6625 MS2 43/112 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 298 6.76 0.00 0 3 31 4 734.14203 2933.54629 0.69 48.77 5805 5805 MS2 51/168 Linfeng_20120130_CHD1_3.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 302 6.34 0.00 0 7 41 3 978.52063 2933.54734 1.05 48.72 5794 5794 MS2 40/112 Linfeng_20120130_CHD1_3.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 296 6.03 0.00 0 5 100 4 734.14154 2933.54433 0.02 48.85 6646 6646 MS2 47/168 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 301 5.85 0.00 0 39 100 4 734.14191 2933.54580 0.52 48.89 5836 5836 MS2 51/168 Linfeng_20120130_CHD1_3.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 303 5.72 0.00 0 4 100 3 978.51959 2933.54422 -0.01 48.73 6619 6619 MS2 41/112 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 301 5.69 0.00 0 14 100 3 978.52002 2933.54551 0.42 48.78 7315 7315 MS2 39/112 Linfeng_20120130_CHD1_5.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 230 5.61 0.00 0 2 52 2 1467.27490 2933.54253 -0.59 48.76 6626 6626 MS2 26/56 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 295 5.28 0.00 0 27 98 3 978.51898 2933.54239 -0.64 48.78 6346 6346 MS2 35/112 Linfeng_20120130_CHD1_2.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 284 5.22 0.00 0 2 12 2 1475.27441 2949.54155 0.81 55.41 7634 7634 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 250 5.19 0.00 0 1 32 2 1467.27722 2933.54717 0.99 48.76 5804 5804 MS2 26/56 Linfeng_20120130_CHD1_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 5.16 0.00 0 0 100 2 966.08771 1931.16814 -0.40 49.22 6911 6911 MS2 23/36 Linfeng_20120130_CHD1_10.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 243 5.09 0.00 0 0 100 2 1467.27478 2933.54228 -0.67 48.92 5844 5844 MS2 24/56 Linfeng_20120130_CHD1_3.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 240 5.05 0.00 0 0 100 2 1467.27405 2933.54082 -1.17 48.98 5857 5857 MS2 23/56 Linfeng_20120130_CHD1_3.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 233 4.99 0.00 0 0 100 2 1467.27539 2933.54350 -0.26 48.85 6647 6647 MS2 26/56 Linfeng_20120130_CHD1_4.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 206 4.90 0.00 0 21 25 3 978.52106 2933.54862 1.49 56.64 4844 4844 MS2 33/112 Linfeng_122411_rIgG_1.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 321 4.86 0.00 0 0 100 3 983.85675 2949.55570 5.60 57.72 7931 7931 MS2 33/112 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 4.83 0.00 0 0 38 2 966.08698 1931.16667 -1.16 48.64 6786 6786 MS2 21/36 Linfeng_20120130_CHD1_10.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 360 4.82 0.00 0 34 94 3 983.85181 2949.54087 0.57 55.37 7624 7624 MS2 37/112 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.79 0.00 0 5 25 4 483.54880 1931.17336 2.30 44.25 4524 4524 MS2 49/108 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.77 0.00 0 10 25 4 483.54861 1931.17263 1.92 43.83 4430 4430 MS2 54/108 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.70 0.00 0 2 25 3 644.39636 1931.17453 2.91 52.18 5464 5464 MS2 34/72 Linfeng_122411_rIgG_10.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 372 4.69 0.00 0 34 81 3 983.85114 2949.53885 -0.11 55.41 7617 7617 MS2 36/112 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.68 0.00 0 24 25 3 644.39594 1931.17325 2.25 43.60 4400 4400 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 4.67 0.00 0 6 100 2 966.09125 1931.17522 3.27 11.33 717 717 MS2 19/36 Linfeng_20120130_CHD1_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.65 0.00 0 7 25 3 644.39673 1931.17563 3.48 47.06 4841 4841 MS2 36/72 Linfeng_122411_rIgG_10.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 358 4.61 0.00 0 46 45 3 983.85205 2949.54160 0.82 55.41 7452 7452 MS2 39/112 Linfeng_20120130_CHD1_1.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 149 4.58 0.00 2 6 5 3 702.06671 2104.18558 -0.87 33.67 3128 3128 MS2 28/68 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.57 0.00 0 11 25 3 644.39423 1931.16812 -0.41 48.54 5927 5927 MS2 36/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.57 0.00 0 2 25 3 644.39661 1931.17527 3.29 44.66 4534 4534 MS2 35/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.56 0.00 0 5 25 3 644.39642 1931.17472 3.01 46.02 4708 4708 MS2 38/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.55 0.00 0 8 25 3 644.39746 1931.17783 4.62 43.91 4321 4321 MS2 33/72 Linfeng_122411_rIgG_9.raw High VGAGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 CID 1.0000 0.0000 1 1 297 4.53 0.00 0 25 100 3 978.52039 2933.54660 0.80 48.83 7327 7327 MS2 33/112 Linfeng_20120130_CHD1_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.52 0.00 0 6 19 2 966.09058 1931.17388 2.57 46.87 6387 6387 MS2 20/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.51 0.00 0 11 25 4 483.54669 1931.16494 -2.06 45.52 5543 5543 MS2 50/108 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.50 0.00 0 11 25 3 644.39447 1931.16886 -0.03 45.48 5376 5376 MS2 41/72 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.49 0.00 0 4 25 3 644.39606 1931.17362 2.44 44.03 4178 4178 MS2 35/72 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.47 0.00 0 8 25 3 644.39685 1931.17600 3.67 44.08 4593 4593 MS2 38/72 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.46 0.00 0 8 25 3 644.39355 1931.16611 -1.45 45.40 5399 5399 MS2 39/72 Linfeng_091311_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.44 0.00 0 27 25 3 644.39667 1931.17545 3.39 56.29 5915 5915 MS2 36/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.40 0.00 0 5 25 3 644.39618 1931.17398 2.63 48.07 4970 4970 MS2 32/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.33 0.00 0 23 100 2 966.09174 1931.17620 3.77 1.49 257 257 MS2 19/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.32 0.00 0 11 25 3 644.39618 1931.17398 2.63 44.07 4501 4501 MS2 36/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.29 0.00 0 4 25 3 644.39386 1931.16703 -0.98 45.22 5379 5379 MS2 37/72 Linfeng_091311_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.28 0.00 0 5 25 3 644.39636 1931.17453 2.91 51.15 5343 5343 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.27 0.00 0 13 11 3 644.39471 1931.16959 0.35 44.02 4951 4951 MS2 37/72 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 4.23 0.00 0 24 25 3 644.39587 1931.17307 2.15 43.84 4717 4717 MS2 33/72 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.23 0.00 0 6 100 2 966.09192 1931.17656 3.96 11.51 1045 1045 MS2 16/36 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.22 0.00 0 30 25 3 644.39270 1931.16355 -2.78 45.44 5472 5472 MS2 38/72 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 4 25 2 966.09082 1931.17436 2.82 44.08 4184 4184 MS2 22/36 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.19 0.00 0 2 25 2 966.09119 1931.17510 3.20 46.06 4713 4713 MS2 21/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 4.17 0.00 0 5 17 3 644.39270 1931.16355 -2.78 45.12 5188 5188 MS2 35/72 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.17 0.00 0 4 25 3 644.39673 1931.17563 3.48 49.11 5101 5101 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.11 0.00 0 29 25 3 644.39398 1931.16739 -0.79 45.18 5500 5500 MS2 37/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.11 0.00 0 14 100 2 966.09296 1931.17864 5.04 11.24 699 699 MS2 21/36 Linfeng_20120130_CHD1_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 4.10 0.00 0 36 25 3 644.39435 1931.16849 -0.22 47.41 5785 5785 MS2 35/72 Linfeng_091311_rIgG_10.raw High LLGKVTIAQGGVLPNIQAVLLPK Unambiguous 8 1 IPI00216457.7 CID 1.0000 0.0000 1 1 5 4.09 0.00 1 11 25 3 781.49152 2342.46000 2.78 42.93 4314 4314 MS2 35/88 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 4.09 0.00 0 17 100 2 966.09271 1931.17815 4.78 46.83 5104 5104 MS2 16/36 Linfeng_20120130_CHD1_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 4.06 0.00 0 2 25 2 966.09186 1931.17644 3.90 44.00 4332 4332 MS2 22/36 Linfeng_122411_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 4.06 0.00 0 27 25 3 644.39343 1931.16574 -1.64 45.55 5384 5384 MS2 37/72 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 4.06 0.00 0 3 25 3 644.39685 1931.17600 3.67 53.20 5578 5578 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.99 0.00 0 5 25 3 644.39655 1931.17508 3.20 50.13 5223 5223 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 22 3.98 0.00 0 8 25 3 644.39307 1931.16465 -2.21 45.32 5460 5460 MS2 36/72 Linfeng_091311_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.96 0.00 0 6 25 2 966.09174 1931.17620 3.77 54.23 5685 5685 MS2 18/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.94 0.00 0 17 25 3 644.39386 1931.16703 -0.98 45.42 5364 5364 MS2 36/72 Linfeng_091311_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.94 0.00 0 17 100 2 966.08826 1931.16924 0.17 0.77 97 97 MS2 17/36 Linfeng_20120130_CHD1_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.91 0.00 0 17 25 3 644.39343 1931.16574 -1.64 45.38 5370 5370 MS2 35/72 Linfeng_091311_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.90 0.00 0 0 100 2 966.08801 1931.16875 -0.08 49.72 6985 6985 MS2 16/36 Linfeng_20120130_CHD1_10.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 114 3.90 0.00 2 0 25 2 1052.59790 2104.18852 0.53 33.83 3149 3149 MS2 21/34 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 5 3.89 0.00 1 0 25 2 1030.13843 2059.26958 2.77 40.63 4017 4017 MS2 22/38 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.89 0.00 0 18 25 3 644.39539 1931.17160 1.39 44.06 4583 4583 MS2 37/72 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.88 0.00 0 5 25 3 644.39697 1931.17636 3.86 55.25 5788 5788 MS2 37/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.87 0.00 0 0 25 3 644.39404 1931.16758 -0.69 49.62 6062 6062 MS2 30/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.87 0.00 0 27 100 2 966.09088 1931.17449 2.89 0.84 106 106 MS2 20/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.84 0.00 0 50 25 3 644.39691 1931.17618 3.76 45.13 4632 4632 MS2 33/72 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.83 0.00 0 16 25 2 966.08679 1931.16631 -1.35 45.62 5393 5393 MS2 24/36 Linfeng_091311_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.80 0.00 0 13 25 2 966.08539 1931.16350 -2.80 45.14 5191 5191 MS2 20/36 Linfeng_091311_rIgG_1.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.80 0.00 0 3 25 3 644.39661 1931.17527 3.29 54.22 5684 5684 MS2 34/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.80 0.00 0 1 25 2 966.09125 1931.17522 3.27 44.68 4536 4536 MS2 23/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.79 0.00 0 17 100 2 966.09167 1931.17607 3.71 1.81 327 327 MS2 17/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.79 0.00 0 16 25 2 966.09174 1931.17620 3.77 43.64 4405 4405 MS2 24/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.77 0.00 0 3 25 2 966.09076 1931.17424 2.76 44.13 4509 4509 MS2 24/36 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.75 0.00 0 30 69 2 966.08923 1931.17119 1.18 1.93 379 379 MS2 15/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.74 0.00 0 12 25 2 966.08539 1931.16350 -2.80 45.54 5485 5485 MS2 23/36 Linfeng_091311_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.73 0.00 0 8 25 2 966.09180 1931.17632 3.83 43.93 4729 4729 MS2 20/36 Linfeng_122411_rIgG_6.raw High VGAGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 2 1 IPI00216457.7 M9(Oxidation) CID 1.0000 0.0000 1 1 332 3.72 0.00 0 52 100 3 983.85510 2949.55075 3.93 56.06 7794 7794 MS2 29/112 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.71 0.00 0 12 25 2 966.08685 1931.16643 -1.29 45.58 5388 5388 MS2 23/36 Linfeng_091311_rIgG_9.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 23 3.70 0.00 0 1 10 3 644.39294 1931.16428 -2.40 46.18 5628 5628 MS2 36/72 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 282 3.69 0.00 1 5 4 2 846.95844 1692.90959 3.99 3.11 277 277 MS2 20/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.69 0.00 0 21 100 2 966.09198 1931.17668 4.02 1.45 246 246 MS2 18/36 Linfeng_20120130_CHD1_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.68 0.00 0 25 100 2 966.09119 1931.17510 3.20 1.49 265 265 MS2 16/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.67 0.00 0 2 25 2 966.09210 1931.17693 4.15 51.16 5344 5344 MS2 22/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.63 0.00 0 6 25 2 966.09161 1931.17595 3.65 44.13 4598 4598 MS2 21/36 Linfeng_122411_rIgG_2.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.60 0.00 0 28 25 2 966.08691 1931.16655 -1.22 45.49 5384 5384 MS2 23/36 Linfeng_091311_rIgG_6.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 3.56 0.00 1 18 25 3 564.97296 1692.90433 0.89 25.58 2051 2051 MS2 23/52 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 307 3.55 0.00 1 6 25 2 846.95795 1692.90862 3.42 24.71 1945 1945 MS2 21/26 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 3.55 0.00 0 33 100 2 966.08960 1931.17192 1.56 0.96 142 142 MS2 18/36 Linfeng_20120130_CHD1_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.51 0.00 0 22 25 3 644.39441 1931.16867 -0.12 50.80 6213 6213 MS2 26/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.48 0.00 0 18 25 4 483.54871 1931.17299 2.11 44.26 4207 4207 MS2 40/108 Linfeng_122411_rIgG_7.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.47 0.00 0 23 100 3 644.39502 1931.17051 0.83 48.81 6830 6830 MS2 22/72 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 3.43 0.00 0 11 25 4 483.54865 1931.17275 1.99 44.10 4345 4345 MS2 41/108 Linfeng_122411_rIgG_9.raw High HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 129 3.43 0.00 2 14 25 4 526.80298 2104.19008 1.27 34.70 3260 3260 MS2 33/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 3.41 0.00 0 18 25 3 644.39667 1931.17545 3.39 43.73 4657 4657 MS2 31/72 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.39 0.00 0 31 100 2 966.09003 1931.17278 2.00 2.27 466 466 MS2 15/36 Linfeng_20120130_CHD1_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.39 0.00 0 0 25 2 966.09052 1931.17375 2.51 48.08 4971 4971 MS2 19/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 3.38 0.00 0 37 25 3 644.39343 1931.16574 -1.64 58.33 6085 6085 MS2 28/72 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.36 0.00 0 30 25 2 966.08630 1931.16533 -1.85 46.59 5680 5680 MS2 18/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.34 0.00 0 6 25 2 966.09216 1931.17705 4.21 53.21 5579 5579 MS2 20/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 13 3.29 0.00 0 24 25 2 966.09277 1931.17827 4.85 55.32 5797 5797 MS2 17/36 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.28 0.00 0 14 25 2 966.09180 1931.17632 3.83 43.74 4659 4659 MS2 19/36 Linfeng_122411_rIgG_4.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.25 0.00 0 22 25 2 966.08600 1931.16472 -2.17 45.35 5522 5522 MS2 22/36 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.23 0.00 0 13 25 2 966.09106 1931.17485 3.08 44.20 4601 4601 MS2 21/36 Linfeng_122411_rIgG_3.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 3.18 0.00 0 28 25 3 644.39532 1931.17142 1.30 52.25 6382 6382 MS2 32/72 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 3.17 0.00 0 5 25 2 966.08673 1931.16619 -1.41 45.25 5383 5383 MS2 21/36 Linfeng_091311_rIgG_3.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 3.17 0.00 1 5 1 3 564.97400 1692.90744 2.72 3.08 272 272 MS2 24/52 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 541 3.16 0.00 1 8 25 2 636.84473 1272.68218 2.13 28.69 2381 2381 MS2 18/20 Linfeng_122411_rIgG_9.raw High NDEELNKLLGKVTIAQGGVLPNIQAVLLPK Unambiguous 8 1 IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.11 0.00 2 22 25 4 796.96643 3184.84389 4.19 46.64 4786 4786 MS2 37/174 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 871 3.11 0.00 0 47 100 2 472.77133 944.53539 4.35 37.30 4377 4377 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 3.11 0.00 0 12 66 2 472.77118 944.53508 4.02 36.32 4183 4183 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 3.09 0.00 0 31 25 2 966.09320 1931.17912 5.29 52.19 5465 5465 MS2 21/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 388 3.07 0.00 1 18 25 4 423.98187 1692.90566 1.67 24.37 2220 2220 MS2 30/78 Linfeng_122411_rIgG_6.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 18 3.05 0.00 0 51 25 2 966.08636 1931.16545 -1.79 45.42 5401 5401 MS2 21/36 Linfeng_091311_rIgG_4.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 477 3.01 0.00 1 6 25 2 636.84418 1272.68108 1.26 29.37 2629 2629 MS2 17/20 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 14 2.99 0.00 0 6 25 2 966.09113 1931.17497 3.14 50.14 5225 5225 MS2 20/36 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.94 0.00 1 12 25 3 564.97351 1692.90598 1.86 24.93 2055 2055 MS2 24/52 Linfeng_122411_rIgG_8.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.92 0.00 1 33 25 3 564.97455 1692.90909 3.70 24.90 1901 1901 MS2 20/52 Linfeng_122411_rIgG_9.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 367 2.91 0.00 1 29 25 4 423.98151 1692.90420 0.81 25.70 2067 2067 MS2 31/78 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 20 2.91 0.00 0 28 25 3 644.39441 1931.16867 -0.12 53.31 6497 6497 MS2 29/72 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 877 2.90 0.00 0 10 3 2 472.77045 944.53362 2.47 35.32 3965 3965 MS2 14/16 Linfeng_20120130_CHD1_10.raw Medium VTIAQGGVLPNIQAVLLPKKTESHHK Unambiguous 8 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 40 2.89 0.00 2 13 25 4 695.40607 2778.60244 1.24 35.01 3299 3299 MS2 41/150 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.84 0.00 0 0 25 2 966.09174 1931.17620 3.77 49.13 5103 5103 MS2 15/36 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 123 2.83 0.00 2 43 25 4 526.80316 2104.19082 1.62 35.96 3420 3420 MS2 26/102 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 393 2.82 0.00 1 9 8 4 423.98175 1692.90517 1.38 3.27 290 290 MS2 24/78 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 857 2.81 0.00 0 53 41 2 472.77081 944.53435 3.25 46.98 6346 6346 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 368 2.81 0.00 1 27 25 4 423.98245 1692.90798 3.04 24.85 2046 2046 MS2 28/78 Linfeng_122411_rIgG_8.raw High VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 12 2.80 0.00 1 7 25 3 687.09113 2059.25882 -2.46 41.84 5079 5079 MS2 23/76 Linfeng_091311_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 21 2.79 0.00 0 7 100 3 644.39368 1931.16648 -1.26 48.70 6804 6804 MS2 27/72 Linfeng_20120130_CHD1_10.raw Medium VTIAQGGVLPNIQAVLLPKK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 6 2.79 0.00 1 14 25 4 515.57233 2059.26748 1.75 40.39 3987 3987 MS2 38/114 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.76 0.00 0 23 25 2 966.09180 1931.17632 3.83 47.10 4846 4846 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 885 2.76 0.00 0 5 6 2 472.77081 944.53435 3.25 34.30 3728 3728 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 19 2.74 0.00 0 42 25 2 966.08551 1931.16374 -2.68 45.35 5463 5463 MS2 19/36 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 887 2.74 0.00 0 36 100 2 472.77124 944.53520 4.15 33.30 3513 3513 MS2 13/16 Linfeng_20120130_CHD1_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 484 2.74 0.00 1 20 25 2 636.84393 1272.68059 0.88 28.16 2392 2392 MS2 17/20 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 891 2.73 0.00 0 42 100 2 472.77045 944.53362 2.47 33.90 3543 3543 MS2 13/16 Linfeng_20120130_CHD1_8.raw Medium HLQLAIRNDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 148 2.72 0.00 2 43 25 4 526.80127 2104.18325 -1.98 33.64 3123 3123 MS2 31/102 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 17 2.66 0.00 0 70 25 2 966.08887 1931.17046 0.80 44.14 4967 4967 MS2 18/36 Linfeng_122411_rIgG_5.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.66 0.00 1 29 25 3 564.97375 1692.90671 2.29 26.63 2189 2189 MS2 20/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 2.65 0.00 0 49 100 2 472.77148 944.53569 4.67 37.25 4369 4369 MS2 13/16 Linfeng_20120130_CHD1_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 16 2.64 0.00 0 49 25 2 966.09161 1931.17595 3.65 56.35 5923 5923 MS2 16/36 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 309 2.61 0.00 1 40 25 2 846.95709 1692.90691 2.41 26.01 2108 2108 MS2 14/26 Linfeng_122411_rIgG_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 432 2.60 0.00 1 9 25 2 636.84119 1272.67510 -3.44 31.23 3700 3700 MS2 17/20 Linfeng_091311_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.58 0.00 0 5 38 2 425.76825 850.52922 4.05 32.27 3280 3280 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 864 2.55 0.00 0 40 27 2 472.77054 944.53380 2.67 46.89 6316 6316 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 888 2.49 0.00 0 34 100 2 472.77069 944.53411 2.99 37.41 4398 4398 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 362 2.48 0.00 1 6 4 3 564.97266 1692.90342 0.35 3.23 284 284 MS2 18/52 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.46 0.00 0 43 100 2 472.77115 944.53502 3.96 33.21 3493 3493 MS2 12/16 Linfeng_20120130_CHD1_10.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 587 2.46 0.00 1 61 100 2 636.84583 1272.68437 3.85 36.76 4272 4272 MS2 13/20 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.46 0.00 0 8 100 2 425.76828 850.52928 4.12 33.29 3510 3510 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.43 0.00 0 4 57 2 425.76822 850.52916 3.97 24.14 1953 1953 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.42 0.00 0 5 100 2 425.76797 850.52867 3.40 27.20 2365 2365 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.37 0.00 0 53 100 2 472.77075 944.53423 3.12 34.06 2886 2886 MS2 13/16 Linfeng_20120130_CHD1_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 867 2.35 0.00 0 40 100 2 472.76999 944.53270 1.50 34.07 3581 3581 MS2 12/16 Linfeng_20120130_CHD1_8.raw High NDEELNKLLGK Unambiguous 9 1 IPI00216457.7 CID 1.0000 0.0000 1 1 524 2.35 0.00 1 28 25 2 636.84369 1272.68010 0.50 30.27 2677 2677 MS2 15/20 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 53 2.34 0.00 0 3 100 2 425.76758 850.52788 2.47 31.25 3052 3052 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 60 2.27 0.00 0 5 100 2 425.76846 850.52965 4.55 25.15 2069 2069 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.27 0.00 0 26 100 2 425.76752 850.52776 2.32 34.95 3877 3877 MS2 11/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High VTIAQGGVLPNIQAVLLPK Unambiguous 11 2 IPI00026272.2;IPI00216457.7 CID 1.0000 0.0000 1 1 15 2.21 0.00 0 12 28 2 966.09015 1931.17302 2.13 46.93 6327 6327 MS2 12/36 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 61 2.17 0.00 0 3 100 2 425.76877 850.53026 5.27 28.21 2528 2528 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 49 2.16 0.00 0 7 100 2 425.76776 850.52825 2.90 26.18 2217 2217 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.08 0.00 0 7 100 2 425.76825 850.52922 4.05 34.30 3729 3729 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 62 2.01 0.00 0 20 100 2 425.76801 850.52873 3.47 23.12 1827 1827 MS2 11/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00009865.4 "Keratin, type I cytoskeletal 10" 60.96 2 32 37 1146 1278.13 57.88 29 354 984.28 55.82 31 262 1756.64 51.03 31 530 584 58.8 5.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 6.76 0.00 0 13 61 3 789.75977 2367.26474 0.84 55.16 7343 7343 MS2 39/80 Linfeng_20120130_CHD1_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 147 6.71 0.00 1 3 25 3 1018.21655 3052.63510 2.51 50.81 5822 5822 MS2 36/104 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 145 6.67 0.00 1 24 25 3 1018.21661 3052.63529 2.57 51.66 6014 6014 MS2 37/104 Linfeng_091311_rIgG_1.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 6.65 0.00 0 2 25 4 687.36237 2746.42763 3.02 52.37 6017 6017 MS2 50/132 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 6.55 0.00 1 1 25 3 1018.21796 3052.63932 3.89 52.87 5690 5690 MS2 36/104 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 6.54 0.00 0 0 100 2 1171.99670 2342.98613 0.71 42.57 5714 5714 MS2 27/52 Linfeng_20120130_CHD1_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 6.39 0.00 0 4 25 3 789.76117 2367.26896 2.62 43.78 4547 4547 MS2 41/80 Linfeng_122411_rIgG_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 566 6.34 0.00 1 21 100 3 738.04034 2212.10648 3.82 36.69 3895 3895 MS2 40/72 Linfeng_20120130_CHD1_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 269 6.33 0.00 0 7 25 3 789.75781 2367.25888 -1.64 44.85 5330 5330 MS2 39/80 Linfeng_091311_rIgG_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 6.31 0.00 0 3 21 3 789.75836 2367.26053 -0.94 43.87 4565 4565 MS2 38/80 Linfeng_122411_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 6.31 0.00 1 18 25 3 1018.21387 3052.62705 -0.13 51.92 6292 6292 MS2 35/104 Linfeng_091311_rIgG_8.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 274 6.27 0.00 0 21 21 3 789.75714 2367.25687 -2.49 44.54 5114 5114 MS2 41/80 Linfeng_091311_rIgG_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 6.25 0.00 0 25 25 3 789.75830 2367.26035 -1.02 44.70 5381 5381 MS2 38/80 Linfeng_091311_rIgG_2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 6.24 0.00 0 5 25 3 916.14764 2746.42838 3.29 52.36 6016 6016 MS2 40/88 Linfeng_122411_rIgG_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 6.19 0.00 0 48 25 3 789.75763 2367.25833 -1.87 45.03 5320 5320 MS2 37/80 Linfeng_091311_rIgG_7.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 146 6.18 0.00 1 0 25 3 1018.21692 3052.63620 2.87 51.86 5571 5571 MS2 35/104 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 473 6.17 0.00 0 0 64 2 998.99304 1996.97881 3.90 39.43 4576 4576 MS2 21/32 Linfeng_20120130_CHD1_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 6.17 0.00 0 44 25 3 789.75677 2367.25577 -2.95 44.70 5314 5314 MS2 39/80 Linfeng_091311_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 6.16 0.00 1 1 25 3 1018.21869 3052.64151 4.61 50.86 5450 5450 MS2 35/104 Linfeng_122411_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 6.12 0.00 1 2 25 3 1018.21863 3052.64133 4.55 54.02 5815 5815 MS2 32/104 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 279 6.12 0.00 0 4 15 3 789.75739 2367.25760 -2.18 45.04 5327 5327 MS2 39/80 Linfeng_091311_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 6.12 0.00 0 0 100 2 1171.99561 2342.98393 -0.23 43.24 4953 4953 MS2 27/52 Linfeng_20120130_CHD1_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 6.10 0.00 1 1 25 3 1018.21814 3052.63987 4.07 50.69 5428 5428 MS2 36/104 Linfeng_122411_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 6.09 0.00 0 0 100 2 1171.99829 2342.98931 2.07 42.70 5743 5743 MS2 27/52 Linfeng_20120130_CHD1_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 82 6.07 0.00 0 0 100 2 1172.00122 2342.99516 4.57 43.05 5284 5284 MS2 26/52 Linfeng_20120130_CHD1_4.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 473 6.04 0.00 0 1 100 2 1056.52905 2112.05083 4.29 11.24 749 749 MS2 26/34 Linfeng_20120130_CHD1_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 76 6.03 0.00 0 0 100 2 1171.99622 2342.98516 0.29 43.34 4978 4978 MS2 27/52 Linfeng_20120130_CHD1_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 278 5.98 0.00 0 43 25 3 789.75983 2367.26493 0.91 43.69 4907 4907 MS2 39/80 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 5.96 0.00 1 24 25 3 1018.21191 3052.62119 -2.05 51.73 6267 6267 MS2 33/104 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 147 5.93 0.00 1 22 25 3 1018.21594 3052.63327 1.91 51.98 6160 6160 MS2 35/104 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.92 0.00 1 13 25 3 1018.21527 3052.63126 1.25 51.82 6188 6188 MS2 33/104 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 5.92 0.00 0 0 100 2 1041.99060 2082.97392 4.33 42.64 4809 4809 MS2 23/32 Linfeng_20120130_CHD1_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 5.90 0.00 0 13 25 3 789.75824 2367.26017 -1.10 44.96 5473 5473 MS2 40/80 Linfeng_091311_rIgG_10.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 5.89 0.00 0 15 25 4 687.36285 2746.42959 3.73 52.49 5651 5651 MS2 45/132 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 336 5.85 0.00 0 0 100 2 1041.98450 2082.96172 -1.53 42.34 5657 5657 MS2 22/32 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 5.84 0.00 0 6 41 2 899.00934 1797.01140 -0.18 55.12 6996 6996 MS2 24/30 Linfeng_20120130_CHD1_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 5.84 0.00 0 2 100 3 694.99609 2082.97373 4.24 42.98 5267 5267 MS2 34/64 Linfeng_20120130_CHD1_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 5.84 0.00 0 31 13 3 789.75787 2367.25907 -1.56 45.07 5425 5425 MS2 38/80 Linfeng_091311_rIgG_8.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 250 5.82 0.00 0 5 25 3 916.14880 2746.43186 4.56 52.40 5640 5640 MS2 38/88 Linfeng_122411_rIgG_3.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 287 5.82 0.00 0 20 25 4 687.36212 2746.42666 2.67 54.08 6424 6424 MS2 49/132 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 5.78 0.00 0 0 25 2 1171.99915 2342.99101 2.80 35.08 3454 3454 MS2 28/52 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 490 5.76 0.00 0 1 51 2 998.99304 1996.97881 3.90 47.46 6279 6279 MS2 23/32 Linfeng_20120130_CHD1_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 31 5.76 0.00 0 0 25 2 1171.99878 2342.99028 2.48 35.13 3432 3432 MS2 26/52 Linfeng_122411_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 5.76 0.00 1 8 25 3 1018.21796 3052.63932 3.89 51.86 5953 5953 MS2 38/104 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 5.75 0.00 1 33 25 3 1018.21552 3052.63199 1.49 51.83 6197 6197 MS2 37/104 Linfeng_091311_rIgG_4.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 277 5.73 0.00 0 1 25 3 958.13940 2872.40366 3.74 47.08 4974 4974 MS2 36/104 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.73 0.00 0 20 9 3 599.67499 1797.01041 -0.73 42.41 4741 4741 MS2 35/60 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.73 0.00 0 2 25 3 599.67712 1797.01682 2.84 42.58 4401 4401 MS2 35/60 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 485 5.73 0.00 0 0 100 2 998.99298 1996.97869 3.84 39.55 4600 4600 MS2 22/32 Linfeng_20120130_CHD1_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 5.71 0.00 0 9 18 2 1184.13171 2367.25615 -2.79 44.61 5123 5123 MS2 28/40 Linfeng_091311_rIgG_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 282 5.71 0.00 0 16 25 3 789.76178 2367.27079 3.39 45.13 4727 4727 MS2 37/80 Linfeng_122411_rIgG_2.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 391 5.69 0.00 0 0 87 2 1056.52332 2112.03935 -1.15 48.64 6598 6598 MS2 25/34 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 5.69 0.00 0 20 25 3 694.99408 2082.96769 1.34 35.29 3647 3647 MS2 35/64 Linfeng_122411_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 5.68 0.00 1 2 25 3 1018.21832 3052.64042 4.25 51.72 5556 5556 MS2 35/104 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 266 5.66 0.00 0 8 100 2 854.39368 1707.78008 4.59 39.46 4480 4480 MS2 24/36 Linfeng_20120130_CHD1_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.66 0.00 1 26 25 3 1018.21613 3052.63382 2.09 52.06 6135 6135 MS2 35/104 Linfeng_091311_rIgG_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 22 5.64 0.00 0 3 13 2 1171.99207 2342.97685 -3.25 36.06 3980 3980 MS2 28/52 Linfeng_091311_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 5.64 0.00 1 11 25 3 1018.21356 3052.62613 -0.43 51.89 6176 6176 MS2 36/104 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 5.63 0.00 1 4 25 3 1018.21936 3052.64353 5.27 50.78 5516 5516 MS2 32/104 Linfeng_122411_rIgG_4.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 292 5.62 0.00 0 20 25 3 916.14667 2746.42545 2.23 53.75 6500 6500 MS2 39/88 Linfeng_091311_rIgG_2.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 276 5.61 0.00 0 3 25 3 958.13776 2872.39872 2.02 47.00 4962 4962 MS2 39/104 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 5.60 0.00 0 3 100 2 1041.99060 2082.97392 4.33 42.74 5399 5399 MS2 24/32 Linfeng_20120130_CHD1_8.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 134 5.60 0.00 1 8 25 3 1018.21924 3052.64316 5.15 50.99 5363 5363 MS2 38/104 Linfeng_122411_rIgG_8.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 531 5.59 0.00 0 30 100 2 998.99341 1996.97954 4.27 47.05 4691 4691 MS2 23/32 Linfeng_20120130_CHD1_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 5.58 0.00 0 0 100 2 854.39337 1707.77947 4.24 39.63 4617 4617 MS2 24/36 Linfeng_20120130_CHD1_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 22 5.58 0.00 0 0 25 2 1171.99231 2342.97734 -3.04 36.01 4267 4267 MS2 28/52 Linfeng_091311_rIgG_2.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 5.58 0.00 0 13 25 3 916.14722 2746.42710 2.83 54.05 6420 6420 MS2 41/88 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 387 5.55 0.00 0 0 100 2 1041.99109 2082.97490 4.80 42.66 4422 4422 MS2 23/32 Linfeng_20120130_CHD1_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 5.55 0.00 0 3 14 3 694.99457 2082.96915 2.04 34.96 3439 3439 MS2 35/64 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 5.55 0.00 0 1 20 3 599.67383 1797.00693 -2.67 43.31 4956 4956 MS2 35/60 Linfeng_091311_rIgG_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 5.54 0.00 0 0 25 2 1041.98853 2082.96977 2.34 35.20 3323 3323 MS2 22/32 Linfeng_122411_rIgG_10.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 506 5.52 0.00 0 5 38 2 1048.52539 2096.04350 -1.60 55.12 7334 7334 MS2 26/34 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 5.50 0.00 0 1 25 2 1041.98767 2082.96807 1.52 35.36 3656 3656 MS2 21/32 Linfeng_122411_rIgG_6.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 214 5.50 0.00 0 7 25 2 1184.13232 2367.25737 -2.28 45.18 5338 5338 MS2 26/40 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 5.49 0.00 0 4 10 3 694.99139 2082.95963 -2.53 35.94 4211 4211 MS2 35/64 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 152 5.49 0.00 0 1 20 2 1041.98401 2082.96074 -1.99 35.96 4214 4214 MS2 22/32 Linfeng_091311_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 5.48 0.00 0 6 25 3 789.76105 2367.26859 2.46 43.57 4636 4636 MS2 40/80 Linfeng_122411_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 540 5.48 0.00 0 0 100 2 998.99347 1996.97966 4.33 46.22 5998 5998 MS2 23/32 Linfeng_20120130_CHD1_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 148 5.47 0.00 1 24 25 3 1018.21552 3052.63199 1.49 61.08 7081 7081 MS2 31/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 314 5.47 0.00 0 6 15 2 998.99066 1996.97405 1.51 38.16 3819 3819 MS2 23/32 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 5.46 0.00 0 0 8 2 1041.98572 2082.96416 -0.35 35.10 3735 3735 MS2 22/32 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 249 5.44 0.00 0 3 26 2 899.01013 1797.01299 0.70 55.14 5823 5823 MS2 24/30 Linfeng_20120130_CHD1_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 5.44 0.00 0 7 100 2 899.00769 1797.00810 -2.01 55.11 6454 6454 MS2 25/30 Linfeng_20120130_CHD1_3.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 450 5.44 0.00 0 7 100 2 1056.52710 2112.04692 2.44 1.63 110 110 MS2 25/34 Linfeng_20120130_CHD1_5.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.43 0.00 0 2 25 2 1184.13171 2367.25615 -2.79 44.78 5391 5391 MS2 27/40 Linfeng_091311_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 5.43 0.00 0 7 11 3 789.75769 2367.25852 -1.79 44.99 5308 5308 MS2 37/80 Linfeng_091311_rIgG_5.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 289 5.42 0.00 0 32 25 3 916.14691 2746.42618 2.49 54.18 6561 6561 MS2 39/88 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 192 5.42 0.00 0 4 25 3 599.67676 1797.01572 2.23 42.30 4477 4477 MS2 33/60 Linfeng_122411_rIgG_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 382 5.41 0.00 0 2 100 2 1041.99060 2082.97392 4.33 42.70 5332 5332 MS2 21/32 Linfeng_20120130_CHD1_10.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 5.41 0.00 0 27 25 3 789.75775 2367.25870 -1.72 45.00 5316 5316 MS2 40/80 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.40 0.00 1 24 25 3 1018.21545 3052.63181 1.43 53.02 6310 6310 MS2 33/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 533 5.40 0.00 0 18 100 2 998.99353 1996.97978 4.39 47.12 5185 5185 MS2 22/32 Linfeng_20120130_CHD1_9.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 144 5.39 0.00 0 1 12 2 1041.98291 2082.95854 -3.05 35.97 4261 4261 MS2 22/32 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 20 5.39 0.00 0 7 25 2 1171.99023 2342.97319 -4.81 36.16 4174 4174 MS2 26/52 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 510 5.39 0.00 0 0 100 2 998.99396 1996.98064 4.82 46.41 6044 6044 MS2 21/32 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 254 5.38 0.00 0 3 100 2 854.39331 1707.77934 4.17 38.76 3251 3251 MS2 22/36 Linfeng_20120130_CHD1_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 35 5.37 0.00 0 23 25 3 781.66754 2342.98807 1.54 35.04 3448 3448 MS2 45/104 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 5.36 0.00 0 5 10 2 998.99146 1996.97563 2.31 38.14 3841 3841 MS2 24/32 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 251 5.36 0.00 0 18 54 2 899.00916 1797.01103 -0.38 55.13 6273 6273 MS2 25/30 Linfeng_20120130_CHD1_9.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 294 5.36 0.00 0 18 25 4 687.36108 2746.42251 1.15 54.19 6562 6562 MS2 52/132 Linfeng_091311_rIgG_8.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 5.35 0.00 0 9 14 3 958.13495 2872.39029 -0.92 47.09 5349 5349 MS2 37/104 Linfeng_122411_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 5.34 0.00 0 5 7 3 781.66864 2342.99137 2.95 35.10 3428 3428 MS2 43/104 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 232 5.34 0.00 0 9 25 3 599.67456 1797.00913 -1.44 43.58 5170 5170 MS2 34/60 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 253 5.34 0.00 0 12 100 2 854.39313 1707.77898 3.95 38.67 3916 3916 MS2 23/36 Linfeng_20120130_CHD1_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 5.33 0.00 0 1 22 2 1041.98914 2082.97099 2.93 35.12 3430 3430 MS2 22/32 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.33 0.00 0 4 25 3 599.67700 1797.01645 2.63 43.67 4538 4538 MS2 35/60 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 5.32 0.00 0 0 25 2 1171.99329 2342.97930 -2.21 36.14 4228 4228 MS2 25/52 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 262 5.32 0.00 0 5 100 2 854.39240 1707.77751 3.09 38.83 3314 3314 MS2 22/36 Linfeng_20120130_CHD1_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 5.32 0.00 0 43 25 3 694.99506 2082.97062 2.75 35.08 3426 3426 MS2 35/64 Linfeng_122411_rIgG_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 497 5.31 0.00 1 5 100 2 1106.55688 2212.10649 3.83 47.59 6312 6312 MS2 25/36 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 5.30 0.00 0 0 100 2 1041.98901 2082.97075 2.81 42.93 4024 4024 MS2 23/32 Linfeng_20120130_CHD1_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 5.30 0.00 0 4 12 3 694.99457 2082.96915 2.04 35.18 3320 3320 MS2 34/64 Linfeng_122411_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 5.28 0.00 0 2 23 3 599.67340 1797.00565 -3.38 43.43 5221 5221 MS2 35/60 Linfeng_091311_rIgG_2.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 349 5.26 0.00 0 28 25 3 699.35669 2096.05552 4.13 53.12 6111 6111 MS2 34/68 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 146 5.26 0.00 1 13 25 3 1018.21692 3052.63620 2.87 53.77 5799 5799 MS2 37/104 Linfeng_122411_rIgG_3.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 5.25 0.00 0 35 25 3 789.75891 2367.26218 -0.25 45.69 5439 5439 MS2 42/80 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 170 5.25 0.00 0 1 25 2 1041.98877 2082.97026 2.58 34.99 3442 3442 MS2 21/32 Linfeng_122411_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 537 5.25 0.00 0 0 100 2 998.99188 1996.97649 2.74 39.08 4896 4896 MS2 23/32 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 191 5.24 0.00 0 3 10 3 599.67676 1797.01572 2.23 42.58 4390 4390 MS2 34/60 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 5.23 0.00 0 6 25 3 599.67383 1797.00693 -2.67 43.88 5273 5273 MS2 34/60 Linfeng_091311_rIgG_8.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 5.23 0.00 0 9 25 2 1184.13208 2367.25688 -2.48 45.03 5352 5352 MS2 27/40 Linfeng_091311_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 5.23 0.00 0 18 25 3 666.32996 1996.97531 2.15 38.11 3837 3837 MS2 35/64 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 236 5.23 0.00 0 18 100 2 899.00861 1797.00994 -0.99 48.98 6677 6677 MS2 24/30 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 5.22 0.00 0 1 100 2 998.99396 1996.98064 4.82 39.15 4422 4422 MS2 21/32 Linfeng_20120130_CHD1_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 511 5.22 0.00 0 6 100 2 998.99377 1996.98027 4.63 46.79 4633 4633 MS2 21/32 Linfeng_20120130_CHD1_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 479 5.22 0.00 0 2 100 2 998.99329 1996.97930 4.14 39.39 4069 4069 MS2 22/32 Linfeng_20120130_CHD1_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 150 5.22 0.00 0 0 25 2 1041.98438 2082.96147 -1.64 35.99 4210 4210 MS2 22/32 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 5.21 0.00 1 3 25 4 763.91516 3052.63881 3.72 50.88 5453 5453 MS2 47/156 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 5.21 0.00 0 16 25 3 599.67712 1797.01682 2.84 42.50 4547 4547 MS2 34/60 Linfeng_122411_rIgG_6.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 32 5.21 0.00 0 0 25 2 1171.99951 2342.99175 3.11 33.11 2807 2807 MS2 25/52 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 251 5.21 0.00 0 14 100 2 854.39215 1707.77703 2.81 39.36 4962 4962 MS2 21/36 Linfeng_20120130_CHD1_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 355 5.21 0.00 0 10 100 2 1041.98743 2082.96758 1.29 43.53 5390 5390 MS2 21/32 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 5.21 0.00 0 5 25 3 694.99463 2082.96933 2.13 34.97 3556 3556 MS2 34/64 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.20 0.00 0 1 25 3 599.67517 1797.01096 -0.42 43.48 5161 5161 MS2 35/60 Linfeng_091311_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.19 0.00 0 4 6 3 694.99103 2082.95853 -3.06 35.96 4260 4260 MS2 34/64 Linfeng_091311_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 5.19 0.00 0 0 100 2 1041.99036 2082.97344 4.10 42.32 5051 5051 MS2 22/32 Linfeng_20120130_CHD1_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 467 5.18 0.00 1 0 100 2 1106.54785 2212.08843 -4.34 45.72 6508 6508 MS2 21/36 Linfeng_20120130_CHD1_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 5.16 0.00 0 9 19 3 781.66431 2342.97837 -2.60 36.16 4202 4202 MS2 46/104 Linfeng_091311_rIgG_7.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 5.16 0.00 0 46 25 3 916.14734 2746.42746 2.96 54.18 6361 6361 MS2 39/88 Linfeng_091311_rIgG_9.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 488 5.15 0.00 0 0 100 2 1056.52820 2112.04912 3.48 48.95 6671 6671 MS2 24/34 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 265 5.14 0.00 0 34 100 2 854.39252 1707.77776 3.24 38.67 4624 4624 MS2 20/36 Linfeng_20120130_CHD1_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 85 5.13 0.00 0 23 100 3 781.66669 2342.98551 0.44 42.61 5724 5724 MS2 41/104 Linfeng_20120130_CHD1_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 145 5.13 0.00 1 5 25 4 763.91431 3052.63540 2.60 50.80 5821 5821 MS2 46/156 Linfeng_122411_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 5.12 0.00 0 13 12 2 998.98602 1996.96477 -3.13 38.71 4343 4343 MS2 22/32 Linfeng_091311_rIgG_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 152 5.12 0.00 0 7 24 3 694.99146 2082.95981 -2.44 35.98 4208 4208 MS2 32/64 Linfeng_091311_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 521 5.11 0.00 0 0 100 2 998.99304 1996.97881 3.90 46.80 4926 4926 MS2 21/32 Linfeng_20120130_CHD1_7.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 457 5.10 0.00 0 13 100 2 1056.52063 2112.03398 -3.69 48.90 6658 6658 MS2 25/34 Linfeng_20120130_CHD1_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 5.09 0.00 0 27 25 3 781.66779 2342.98880 1.85 35.19 3322 3322 MS2 45/104 Linfeng_122411_rIgG_10.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 307 5.09 0.00 0 0 100 2 1184.13538 2367.26348 0.30 55.17 7347 7347 MS2 25/40 Linfeng_20120130_CHD1_4.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 5.08 0.00 0 5 25 2 1184.13306 2367.25884 -1.66 44.80 5327 5327 MS2 26/40 Linfeng_091311_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 5.07 0.00 0 0 100 2 854.39368 1707.78008 4.59 39.71 3935 3935 MS2 22/36 Linfeng_20120130_CHD1_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 5.06 0.00 0 8 100 2 854.39276 1707.77825 3.52 39.69 4135 4135 MS2 23/36 Linfeng_20120130_CHD1_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 5.06 0.00 0 29 25 3 789.75751 2367.25797 -2.02 45.70 5510 5510 MS2 38/80 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 338 5.06 0.00 0 1 13 2 998.99152 1996.97576 2.37 38.23 3711 3711 MS2 23/32 Linfeng_122411_rIgG_10.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.04 0.00 0 5 13 3 694.99103 2082.95853 -3.06 36.22 4221 4221 MS2 34/64 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 553 5.04 0.00 0 1 100 2 998.99414 1996.98100 5.00 46.70 5076 5076 MS2 22/32 Linfeng_20120130_CHD1_9.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 5.04 0.00 0 7 100 2 1041.99072 2082.97417 4.45 42.56 5179 5179 MS2 22/32 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 5.04 0.00 0 1 25 2 1041.98389 2082.96050 -2.11 36.20 4206 4206 MS2 22/32 Linfeng_091311_rIgG_7.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 5.03 0.00 0 54 25 3 916.14740 2746.42765 3.03 53.96 6392 6392 MS2 37/88 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 35 5.03 0.00 0 4 19 3 781.66730 2342.98734 1.23 35.33 3652 3652 MS2 46/104 Linfeng_122411_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 5.02 0.00 1 38 25 4 763.91400 3052.63418 2.20 51.96 6347 6347 MS2 44/156 Linfeng_091311_rIgG_10.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 5.01 0.00 1 4 25 3 738.03882 2212.10190 1.75 31.30 2971 2971 MS2 38/72 Linfeng_122411_rIgG_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 5.01 0.00 0 7 13 2 1184.13513 2367.26299 0.10 45.04 5315 5315 MS2 27/40 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 5.01 0.00 1 0 25 3 1018.21777 3052.63877 3.71 52.74 5679 5679 MS2 27/104 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 287 5.00 0.00 0 15 100 2 854.39398 1707.78069 4.95 38.44 4285 4285 MS2 22/36 Linfeng_20120130_CHD1_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.99 0.00 0 0 25 2 1171.99329 2342.97930 -2.21 36.10 4231 4231 MS2 24/52 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 510 4.98 0.00 0 0 100 2 998.99304 1996.97881 3.90 46.65 5275 5275 MS2 20/32 Linfeng_20120130_CHD1_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 4.98 0.00 1 6 25 3 738.03870 2212.10154 1.59 31.32 2943 2943 MS2 39/72 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 4.98 0.00 0 14 25 2 899.01263 1797.01799 3.49 42.63 4408 4408 MS2 23/30 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 4.96 0.00 0 9 2 3 694.99121 2082.95908 -2.79 36.00 3971 3971 MS2 34/64 Linfeng_091311_rIgG_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 257 4.94 0.00 0 6 14 2 998.98608 1996.96489 -3.07 38.82 4570 4570 MS2 23/32 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 249 4.93 0.00 0 28 100 2 899.00995 1797.01262 0.50 48.86 7335 7335 MS2 22/30 Linfeng_20120130_CHD1_5.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 495 4.93 0.00 1 85 100 2 1106.56226 2212.11724 8.69 36.66 3889 3889 MS2 25/36 Linfeng_20120130_CHD1_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 131 4.92 0.00 0 12 25 2 854.39178 1707.77629 2.38 32.66 3318 3318 MS2 24/36 Linfeng_122411_rIgG_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 4.92 0.00 0 20 25 3 958.13495 2872.39029 -0.92 48.30 5766 5766 MS2 34/104 Linfeng_091311_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 490 4.92 0.00 0 7 100 2 998.98956 1996.97185 0.41 45.99 6576 6576 MS2 24/32 Linfeng_20120130_CHD1_5.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 4.92 0.00 0 41 25 3 916.14667 2746.42545 2.23 53.95 6414 6414 MS2 38/88 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 4.92 0.00 0 29 25 3 781.66846 2342.99082 2.71 35.22 3225 3225 MS2 42/104 Linfeng_122411_rIgG_9.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 492 4.91 0.00 1 0 100 2 1106.55066 2212.09404 -1.80 45.43 6431 6431 MS2 21/36 Linfeng_20120130_CHD1_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 115 4.91 0.00 0 2 15 2 854.38757 1707.76787 -2.55 33.71 3898 3898 MS2 24/36 Linfeng_091311_rIgG_6.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.89 0.00 0 15 25 3 958.13568 2872.39249 -0.15 48.54 5759 5759 MS2 36/104 Linfeng_091311_rIgG_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.88 0.00 0 9 19 3 781.66406 2342.97763 -2.92 35.97 4215 4215 MS2 43/104 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 4.86 0.00 0 6 23 2 998.98621 1996.96514 -2.95 39.01 4575 4575 MS2 22/32 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 226 4.85 0.00 0 15 25 3 599.67462 1797.00931 -1.34 43.74 5164 5164 MS2 34/60 Linfeng_091311_rIgG_6.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.85 0.00 1 7 2 3 738.03687 2212.09604 -0.89 35.38 3772 3772 MS2 34/72 Linfeng_122411_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 139 4.83 0.00 0 0 23 2 1041.98303 2082.95879 -2.93 36.15 4172 4172 MS2 22/32 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 4.83 0.00 0 3 6 2 998.98499 1996.96269 -4.17 38.70 4618 4618 MS2 23/32 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.83 0.00 1 10 25 4 763.91602 3052.64223 4.84 51.07 5373 5373 MS2 43/156 Linfeng_122411_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 4.82 0.00 0 6 7 2 899.00879 1797.01030 -0.79 55.12 8024 8024 MS2 24/30 Linfeng_20120130_CHD1_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 139 4.82 0.00 1 6 25 4 763.91498 3052.63808 3.48 51.90 5574 5574 MS2 43/156 Linfeng_122411_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 143 4.81 0.00 0 1 3 2 1041.98315 2082.95903 -2.81 36.01 3973 3973 MS2 22/32 Linfeng_091311_rIgG_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 250 4.81 0.00 0 0 25 2 998.98627 1996.96526 -2.89 35.25 4167 4167 MS2 24/32 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 4.81 0.00 0 13 25 3 599.67419 1797.00803 -2.05 43.78 5163 5163 MS2 35/60 Linfeng_091311_rIgG_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 339 4.81 0.00 1 17 25 3 738.03363 2212.08634 -5.28 32.29 3777 3777 MS2 40/72 Linfeng_091311_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 4.80 0.00 0 0 100 2 1041.98889 2082.97051 2.69 42.87 3810 3810 MS2 21/32 Linfeng_20120130_CHD1_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.79 0.00 0 6 25 3 694.99475 2082.96970 2.31 32.88 2778 2778 MS2 34/64 Linfeng_122411_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 4.79 0.00 0 2 25 3 599.67657 1797.01517 1.92 42.73 4333 4333 MS2 36/60 Linfeng_122411_rIgG_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.78 0.00 0 22 8 3 694.99304 2082.96457 -0.15 35.00 3721 3721 MS2 32/64 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 256 4.78 0.00 0 11 20 2 899.00928 1797.01128 -0.25 55.11 7331 7331 MS2 24/30 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 121 4.77 0.00 0 5 25 2 854.38824 1707.76921 -1.77 33.50 3886 3886 MS2 25/36 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.77 0.00 1 2 25 4 763.91534 3052.63955 3.96 50.69 5429 5429 MS2 47/156 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 4.77 0.00 0 40 53 2 899.00983 1797.01238 0.36 55.12 7550 7550 MS2 25/30 Linfeng_20120130_CHD1_10.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.77 0.00 0 9 25 2 998.98590 1996.96453 -3.25 38.96 4556 4556 MS2 22/32 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 4.77 0.00 0 15 25 2 899.00824 1797.00920 -1.40 43.64 5178 5178 MS2 23/30 Linfeng_091311_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 260 4.76 0.00 0 46 100 2 854.39301 1707.77873 3.81 38.61 4524 4524 MS2 20/36 Linfeng_20120130_CHD1_8.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 4.75 0.00 0 11 100 3 694.99609 2082.97373 4.24 42.60 5116 5116 MS2 33/64 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 4.75 0.00 0 1 25 3 599.67444 1797.00876 -1.65 43.81 5166 5166 MS2 34/60 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 225 4.75 0.00 0 28 100 2 899.01154 1797.01579 2.27 55.66 8175 8175 MS2 20/30 Linfeng_20120130_CHD1_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 108 4.75 0.00 0 4 6 2 854.38641 1707.76555 -3.91 33.55 3633 3633 MS2 23/36 Linfeng_091311_rIgG_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 594 4.75 0.00 1 79 100 3 738.04199 2212.11142 6.06 36.75 3909 3909 MS2 34/72 Linfeng_20120130_CHD1_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.74 0.00 1 0 25 4 763.91541 3052.63979 4.04 53.94 5805 5805 MS2 42/156 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 121 4.74 0.00 0 4 25 2 854.38824 1707.76921 -1.77 33.34 3875 3875 MS2 25/36 Linfeng_091311_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 4.74 0.00 0 5 100 2 854.39111 1707.77495 1.59 38.34 4726 4726 MS2 21/36 Linfeng_20120130_CHD1_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 251 4.74 0.00 0 5 100 2 854.39203 1707.77678 2.66 39.84 3482 3482 MS2 20/36 Linfeng_20120130_CHD1_7.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 23 4.73 0.00 0 19 13 3 781.66302 2342.97452 -4.24 35.99 4264 4264 MS2 44/104 Linfeng_091311_rIgG_2.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 154 4.72 0.00 0 3 11 3 694.99133 2082.95945 -2.62 36.15 4200 4200 MS2 35/64 Linfeng_091311_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 120 4.71 0.00 0 3 25 2 854.38733 1707.76738 -2.84 33.72 3889 3889 MS2 25/36 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 177 4.69 0.00 0 0 25 2 1041.98987 2082.97246 3.63 35.12 3574 3574 MS2 21/32 Linfeng_122411_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 38 4.69 0.00 0 10 25 3 781.66852 2342.99100 2.79 35.06 3567 3567 MS2 42/104 Linfeng_122411_rIgG_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 507 4.69 0.00 0 0 100 2 998.99341 1996.97954 4.27 46.56 5756 5756 MS2 21/32 Linfeng_20120130_CHD1_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 379 4.69 0.00 1 13 25 3 738.03943 2212.10373 2.58 31.59 3180 3180 MS2 40/72 Linfeng_122411_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 4.69 0.00 0 1 100 3 694.99652 2082.97501 4.86 42.82 5232 5232 MS2 29/64 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 253 4.69 0.00 0 10 100 2 854.39191 1707.77654 2.52 38.62 4401 4401 MS2 22/36 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 4.68 0.00 0 10 25 2 899.01294 1797.01860 3.83 42.42 4492 4492 MS2 22/30 Linfeng_122411_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 122 4.68 0.00 0 7 4 2 854.38885 1707.77043 -1.05 3.84 382 382 MS2 24/36 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 134 4.68 0.00 0 10 25 2 854.39252 1707.77776 3.24 32.40 3229 3229 MS2 24/36 Linfeng_122411_rIgG_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 112 4.68 0.00 0 6 25 2 854.38770 1707.76811 -2.41 33.41 3927 3927 MS2 24/36 Linfeng_091311_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 116 4.68 0.00 0 9 8 2 854.39142 1707.77556 1.95 32.60 3140 3140 MS2 25/36 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 28 4.67 0.00 0 2 5 3 781.66510 2342.98075 -1.59 35.09 3734 3734 MS2 43/104 Linfeng_122411_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 115 4.66 0.00 0 7 25 2 854.38763 1707.76799 -2.48 33.57 4010 4010 MS2 26/36 Linfeng_091311_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 198 4.66 0.00 0 17 25 2 899.01184 1797.01641 2.61 42.61 4394 4394 MS2 23/30 Linfeng_122411_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 234 4.63 0.00 0 46 100 2 854.39215 1707.77703 2.81 39.96 4564 4564 MS2 20/36 Linfeng_20120130_CHD1_1.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.63 0.00 0 25 25 3 781.66394 2342.97727 -3.07 36.02 4213 4213 MS2 43/104 Linfeng_091311_rIgG_4.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 4.62 0.00 0 4 25 3 916.14783 2746.42893 3.49 52.54 5650 5650 MS2 36/88 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 114 4.60 0.00 0 5 7 2 854.39142 1707.77556 1.95 32.37 2958 2958 MS2 24/36 Linfeng_122411_rIgG_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 4.60 0.00 0 33 25 3 599.67694 1797.01627 2.53 43.63 4526 4526 MS2 33/60 Linfeng_122411_rIgG_3.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 523 4.59 0.00 0 17 100 3 704.68610 2112.04374 0.93 2.18 162 162 MS2 27/68 Linfeng_20120130_CHD1_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 281 4.58 0.00 0 16 14 2 998.98810 1996.96892 -1.05 38.09 4148 4148 MS2 23/32 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 258 4.58 0.00 0 7 12 2 899.00952 1797.01177 0.03 55.13 7363 7363 MS2 22/30 Linfeng_20120130_CHD1_1.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 4.57 0.00 1 5 25 3 738.03717 2212.09696 -0.48 31.26 3209 3209 MS2 37/72 Linfeng_122411_rIgG_5.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 4.57 0.00 0 2 25 3 958.13867 2872.40146 2.97 48.11 5105 5105 MS2 36/104 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 257 4.57 0.00 0 13 100 2 854.39343 1707.77959 4.31 40.65 4809 4809 MS2 23/36 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.56 0.00 0 3 8 3 666.33026 1996.97623 2.61 38.22 3710 3710 MS2 33/64 Linfeng_122411_rIgG_10.raw High YcVQLSQIQAQISALEEQLQQIR Unambiguous 1 1 IPI00009865.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 207 4.56 0.00 0 4 25 2 1373.71741 2746.42754 2.99 52.48 6031 6031 MS2 28/44 Linfeng_122411_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 367 4.56 0.00 0 3 100 2 1041.98975 2082.97222 3.51 42.94 4319 4319 MS2 22/32 Linfeng_20120130_CHD1_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 117 4.55 0.00 0 11 8 2 854.38660 1707.76592 -3.70 33.75 3858 3858 MS2 25/36 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.55 0.00 0 48 18 3 781.66382 2342.97690 -3.23 36.13 4170 4170 MS2 44/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 4.55 0.00 0 7 18 3 666.32678 1996.96579 -2.62 39.00 4574 4574 MS2 33/64 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 318 4.54 0.00 0 4 25 2 998.99207 1996.97685 2.92 38.27 4019 4019 MS2 23/32 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 204 4.54 0.00 0 37 25 2 899.01202 1797.01677 2.81 44.21 4608 4608 MS2 22/30 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.54 0.00 0 24 25 3 599.67700 1797.01645 2.63 45.82 4814 4814 MS2 33/60 Linfeng_122411_rIgG_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 591 4.54 0.00 1 8 85 3 738.04175 2212.11069 5.73 46.66 6093 6093 MS2 28/72 Linfeng_20120130_CHD1_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 4.53 0.00 1 9 25 4 763.91266 3052.62880 0.44 51.75 6270 6270 MS2 39/156 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 4.49 0.00 0 0 25 2 998.98981 1996.97234 0.66 34.53 3239 3239 MS2 20/32 Linfeng_122411_rIgG_10.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 435 4.49 0.00 0 0 100 2 1056.52271 2112.03813 -1.72 49.18 6704 6704 MS2 23/34 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 132 4.47 0.00 0 4 25 2 854.39246 1707.77764 3.16 32.43 2874 2874 MS2 25/36 Linfeng_122411_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 132 4.46 0.00 0 11 25 2 854.39215 1707.77703 2.81 32.68 2752 2752 MS2 24/36 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.45 0.00 0 3 25 3 666.33026 1996.97623 2.61 38.25 4016 4016 MS2 37/64 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 4.45 0.00 0 27 25 3 599.67639 1797.01462 1.61 42.59 3994 3994 MS2 32/60 Linfeng_122411_rIgG_7.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 444 4.45 0.00 0 19 100 2 1056.52515 2112.04302 0.59 55.21 7358 7358 MS2 21/34 Linfeng_20120130_CHD1_4.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 278 4.44 0.00 0 26 100 2 854.39398 1707.78069 4.95 39.65 4793 4793 MS2 22/36 Linfeng_20120130_CHD1_10.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.43 0.00 0 0 25 2 1041.98938 2082.97148 3.16 32.99 2791 2791 MS2 21/32 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 542 4.39 0.00 0 21 100 2 998.99249 1996.97771 3.35 46.51 6300 6300 MS2 19/32 Linfeng_20120130_CHD1_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 4.39 0.00 0 7 25 3 599.67438 1797.00858 -1.75 44.51 5356 5356 MS2 31/60 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 37 4.39 0.00 0 13 25 3 781.66876 2342.99173 3.10 32.60 2741 2741 MS2 40/104 Linfeng_122411_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 123 4.39 0.00 0 12 8 2 854.38989 1707.77251 0.16 32.43 3368 3368 MS2 24/36 Linfeng_122411_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 4.37 0.00 1 16 25 4 763.91327 3052.63125 1.24 52.04 6133 6133 MS2 43/156 Linfeng_091311_rIgG_7.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 116 4.37 0.00 0 5 3 2 854.39136 1707.77544 1.88 32.47 3093 3093 MS2 25/36 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 4.37 0.00 0 13 25 3 599.67297 1797.00437 -4.09 44.89 5295 5295 MS2 33/60 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 4.36 0.00 0 14 25 2 899.00732 1797.00737 -2.42 59.23 6987 6987 MS2 22/30 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 136 4.36 0.00 1 9 25 4 763.91541 3052.63979 4.04 51.85 5952 5952 MS2 44/156 Linfeng_122411_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 4.35 0.00 0 29 25 3 694.99011 2082.95578 -4.37 36.09 4165 4165 MS2 36/64 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 4.34 0.00 1 9 25 4 763.91516 3052.63881 3.72 51.72 5557 5557 MS2 49/156 Linfeng_122411_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 4.34 0.00 0 12 25 3 666.33038 1996.97660 2.79 38.08 3809 3809 MS2 32/64 Linfeng_122411_rIgG_3.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 140 4.34 0.00 0 2 25 2 1041.98303 2082.95879 -2.93 36.26 4226 4226 MS2 22/32 Linfeng_091311_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 4.33 0.00 1 15 25 4 763.91394 3052.63393 2.12 51.67 6015 6015 MS2 44/156 Linfeng_091311_rIgG_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 4.33 0.00 0 18 25 3 958.13318 2872.38498 -2.76 48.18 5824 5824 MS2 33/104 Linfeng_091311_rIgG_2.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 4.33 0.00 0 6 25 3 666.32623 1996.96415 -3.44 38.97 4557 4557 MS2 33/64 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 4.33 0.00 0 5 25 3 599.67413 1797.00785 -2.16 44.58 5295 5295 MS2 34/60 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.32 0.00 1 5 25 4 763.91571 3052.64101 4.44 52.92 5696 5696 MS2 46/156 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 36 4.30 0.00 0 40 25 3 781.66785 2342.98899 1.93 35.30 3081 3081 MS2 42/104 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 528 4.29 0.00 0 47 100 2 998.99408 1996.98088 4.94 0.78 98 98 MS2 20/32 Linfeng_20120130_CHD1_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 4.28 0.00 0 9 25 3 666.32690 1996.96616 -2.43 38.77 4570 4570 MS2 34/64 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 4.28 0.00 0 10 25 3 599.67505 1797.01059 -0.63 44.57 5297 5297 MS2 32/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 4.27 0.00 0 16 25 3 599.67560 1797.01224 0.29 45.65 5433 5433 MS2 32/60 Linfeng_091311_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.27 0.00 1 19 25 4 763.91278 3052.62929 0.60 51.93 6293 6293 MS2 47/156 Linfeng_091311_rIgG_8.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 4.26 0.00 1 40 25 3 1018.21350 3052.62595 -0.49 59.29 6914 6914 MS2 27/104 Linfeng_091311_rIgG_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 4.26 0.00 0 12 25 3 666.32959 1996.97422 1.60 37.98 3418 3418 MS2 35/64 Linfeng_122411_rIgG_7.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 4.26 0.00 0 9 25 2 998.99170 1996.97612 2.55 38.09 3949 3949 MS2 22/32 Linfeng_122411_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 4.26 0.00 1 7 100 2 1106.54590 2212.08452 -6.10 45.67 6496 6496 MS2 18/36 Linfeng_20120130_CHD1_5.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 4.25 0.00 0 11 25 3 699.35632 2096.05442 3.60 54.44 6461 6461 MS2 29/68 Linfeng_091311_rIgG_5.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.25 0.00 1 7 25 4 763.91272 3052.62905 0.52 51.92 6180 6180 MS2 48/156 Linfeng_091311_rIgG_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 4.24 0.00 0 19 100 2 695.84692 1390.68657 4.06 33.74 3430 3430 MS2 19/24 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 533 4.23 0.00 0 8 100 2 998.99176 1996.97624 2.62 46.51 6225 6225 MS2 20/32 Linfeng_20120130_CHD1_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 249 4.23 0.00 0 6 27 2 899.00983 1797.01238 0.36 55.14 6074 6074 MS2 23/30 Linfeng_20120130_CHD1_7.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 587 4.23 0.00 1 13 100 3 738.04163 2212.11032 5.56 46.60 6081 6081 MS2 26/72 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 4.22 0.00 0 71 25 2 899.01068 1797.01409 1.32 58.17 6896 6896 MS2 22/30 Linfeng_091311_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 106 4.22 0.00 0 26 100 3 781.66962 2342.99430 4.20 43.08 4915 4915 MS2 33/104 Linfeng_20120130_CHD1_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 4.22 0.00 0 14 25 3 599.67413 1797.00785 -2.16 43.68 5311 5311 MS2 34/60 Linfeng_091311_rIgG_10.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 4.21 0.00 0 36 100 2 854.39270 1707.77812 3.45 39.98 5104 5104 MS2 19/36 Linfeng_20120130_CHD1_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 516 4.20 0.00 0 5 100 3 968.80444 2904.39878 5.52 2.19 164 164 MS2 29/104 Linfeng_20120130_CHD1_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 590 4.19 0.00 0 4 100 3 666.33154 1996.98008 4.53 46.86 6136 6136 MS2 30/64 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 265 4.19 0.00 0 8 25 2 998.98608 1996.96489 -3.07 38.92 4529 4529 MS2 22/32 Linfeng_091311_rIgG_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 33 4.19 0.00 0 1 25 2 1171.99841 2342.98955 2.17 35.41 3662 3662 MS2 21/52 Linfeng_122411_rIgG_6.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 4.17 0.00 0 17 25 2 998.98639 1996.96550 -2.76 38.73 4565 4565 MS2 22/32 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 4.16 0.00 0 7 23 3 666.32690 1996.96616 -2.43 38.85 4574 4574 MS2 35/64 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 4.15 0.00 1 18 100 3 412.23285 1234.68399 4.00 25.66 1652 1652 MS2 19/36 Linfeng_20120130_CHD1_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 117 4.15 0.00 0 7 25 2 854.38794 1707.76860 -2.13 33.80 3892 3892 MS2 23/36 Linfeng_091311_rIgG_9.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 228 4.14 0.00 1 0 100 3 1018.21338 3052.62558 -0.61 48.72 6617 6617 MS2 29/104 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 4.13 0.00 0 19 25 3 599.67413 1797.00785 -2.16 44.84 5301 5301 MS2 32/60 Linfeng_091311_rIgG_6.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 4.12 0.00 0 24 100 2 854.39221 1707.77715 2.88 38.70 3634 3634 MS2 20/36 Linfeng_20120130_CHD1_9.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 4.12 0.00 0 4 25 4 718.85583 2872.40151 2.99 47.19 4989 4989 MS2 41/156 Linfeng_122411_rIgG_2.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.10 0.00 0 18 25 3 781.66376 2342.97672 -3.31 36.27 4227 4227 MS2 42/104 Linfeng_091311_rIgG_6.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 4.09 0.00 1 14 25 4 763.91266 3052.62880 0.44 51.83 6189 6189 MS2 41/156 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 361 4.09 0.00 0 14 25 3 666.32983 1996.97495 1.97 38.08 3947 3947 MS2 32/64 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 207 4.09 0.00 0 54 25 2 899.00793 1797.00859 -1.74 57.96 6713 6713 MS2 19/30 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 320 4.09 0.00 0 74 11 3 666.32825 1996.97019 -0.42 38.09 4147 4147 MS2 36/64 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 4.08 0.00 0 11 25 3 599.67682 1797.01590 2.33 48.15 5110 5110 MS2 29/60 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 349 4.07 0.00 0 9 100 2 683.32489 1365.64250 2.29 20.88 1428 1428 MS2 16/20 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 4.06 0.00 0 27 25 3 599.67487 1797.01004 -0.93 58.20 6899 6899 MS2 32/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.04 0.00 0 34 25 3 599.67712 1797.01682 2.84 44.75 4678 4678 MS2 30/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 4.04 0.00 0 24 25 3 599.67596 1797.01334 0.90 43.44 4875 4875 MS2 34/60 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 251 4.04 0.00 0 34 100 2 899.00891 1797.01055 -0.65 48.67 6605 6605 MS2 21/30 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 4.04 0.00 0 20 25 2 998.98694 1996.96660 -2.21 38.96 4557 4557 MS2 23/32 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 4.04 0.00 0 36 25 2 899.00653 1797.00578 -3.30 59.27 6860 6860 MS2 20/30 Linfeng_091311_rIgG_4.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 4.03 0.00 1 19 25 4 763.91278 3052.62929 0.60 51.85 6200 6200 MS2 42/156 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 511 4.03 0.00 1 2 29 2 717.89111 1434.77495 3.45 35.04 3717 3717 MS2 17/20 Linfeng_20120130_CHD1_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 342 4.02 0.00 0 23 100 2 683.32538 1365.64348 3.01 20.76 1348 1348 MS2 16/20 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 247 4.02 0.00 0 46 100 2 899.00909 1797.01091 -0.45 48.97 6675 6675 MS2 22/30 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 537 4.02 0.00 1 2 28 2 717.88892 1434.77056 0.39 33.79 3663 3663 MS2 17/20 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 4.02 0.00 0 5 25 3 599.67432 1797.00840 -1.85 46.46 5494 5494 MS2 34/60 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 4.02 0.00 1 13 52 3 412.23291 1234.68418 4.14 24.78 1733 1733 MS2 19/36 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 4.01 0.00 0 7 25 3 599.67682 1797.01590 2.33 53.36 6339 6339 MS2 26/60 Linfeng_091311_rIgG_3.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.01 0.00 0 6 25 2 854.39362 1707.77995 4.52 32.48 2340 2340 MS2 21/36 Linfeng_122411_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 135 4.00 0.00 0 5 13 3 569.92969 1707.77451 1.33 32.48 3094 3094 MS2 37/72 Linfeng_122411_rIgG_3.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 149 3.99 0.00 1 35 25 4 763.91357 3052.63247 1.64 51.94 6155 6155 MS2 44/156 Linfeng_091311_rIgG_9.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 3.99 0.00 0 3 3 3 666.32672 1996.96561 -2.71 38.76 4350 4350 MS2 34/64 Linfeng_091311_rIgG_1.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 548 3.98 0.00 0 12 100 2 1048.52905 2096.05083 1.89 55.16 7370 7370 MS2 21/34 Linfeng_20120130_CHD1_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 3.98 0.00 0 5 10 3 666.32611 1996.96378 -3.63 38.72 4620 4620 MS2 35/64 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 3.97 0.00 1 13 75 3 412.23340 1234.68564 5.33 24.60 1714 1714 MS2 19/36 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.97 0.00 0 65 25 2 899.00940 1797.01152 -0.11 57.98 6756 6756 MS2 20/30 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 212 3.97 0.00 0 10 25 2 899.00830 1797.00932 -1.33 43.60 5177 5177 MS2 24/30 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.96 0.00 0 7 25 3 599.67432 1797.00840 -1.85 43.72 5147 5147 MS2 32/60 Linfeng_091311_rIgG_5.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 155 3.96 0.00 0 15 25 3 694.99158 2082.96018 -2.26 36.22 4204 4204 MS2 33/64 Linfeng_091311_rIgG_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 3.95 0.00 0 24 25 2 899.00793 1797.00859 -1.74 58.97 6789 6789 MS2 20/30 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 253 3.94 0.00 0 0 100 2 899.00653 1797.00578 -3.30 49.08 7379 7379 MS2 21/30 Linfeng_20120130_CHD1_5.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 585 3.93 0.00 0 17 56 3 666.33160 1996.98026 4.63 46.95 6158 6158 MS2 34/64 Linfeng_20120130_CHD1_4.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 369 3.93 0.00 0 3 100 3 694.99469 2082.96952 2.22 43.17 4937 4937 MS2 29/64 Linfeng_20120130_CHD1_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 3.93 0.00 0 11 18 2 899.00745 1797.00762 -2.28 43.43 4971 4971 MS2 24/30 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 3.92 0.00 0 5 100 2 854.39197 1707.77666 2.59 38.67 3734 3734 MS2 18/36 Linfeng_20120130_CHD1_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 340 3.92 0.00 0 10 100 2 683.32532 1365.64336 2.92 19.01 1231 1231 MS2 16/20 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 184 3.91 0.00 0 42 25 3 599.67816 1797.01993 4.57 49.20 5243 5243 MS2 32/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 3.91 0.00 0 23 22 3 599.67499 1797.01041 -0.73 55.13 8028 8028 MS2 31/60 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 3.91 0.00 0 28 25 3 599.67572 1797.01261 0.49 51.26 6127 6127 MS2 29/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.90 0.00 0 38 25 3 599.67419 1797.00803 -2.05 45.49 5482 5482 MS2 30/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 237 3.90 0.00 0 47 100 2 899.01434 1797.02141 5.39 56.05 7572 7572 MS2 18/30 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.90 0.00 0 23 25 3 599.67584 1797.01297 0.70 57.57 6722 6722 MS2 29/60 Linfeng_091311_rIgG_4.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 105 3.89 0.00 0 4 100 3 781.66937 2342.99356 3.88 43.06 5285 5285 MS2 37/104 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.88 0.00 0 73 25 3 599.67200 1797.00144 -5.72 47.61 5639 5639 MS2 31/60 Linfeng_091311_rIgG_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 331 3.87 0.00 0 5 100 2 691.33026 1381.65325 3.64 23.06 1549 1549 MS2 17/22 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 3.87 0.00 1 6 35 3 412.23291 1234.68418 4.14 25.03 1815 1815 MS2 21/36 Linfeng_20120130_CHD1_5.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 3.87 0.00 0 0 100 3 781.66528 2342.98130 -1.35 43.29 4966 4966 MS2 39/104 Linfeng_20120130_CHD1_2.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 274 3.87 0.00 0 44 25 3 789.75848 2367.26090 -0.79 45.99 5473 5473 MS2 32/80 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.86 0.00 0 14 25 3 599.67432 1797.00840 -1.85 44.47 5105 5105 MS2 32/60 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 3.86 0.00 0 17 25 3 599.67529 1797.01133 -0.22 58.24 6817 6817 MS2 29/60 Linfeng_091311_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.86 0.00 0 13 25 3 599.67725 1797.01719 3.04 47.16 4985 4985 MS2 24/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.86 0.00 0 33 25 2 899.00684 1797.00640 -2.96 43.48 5226 5226 MS2 24/30 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.85 0.00 1 13 100 3 412.23306 1234.68463 4.51 24.01 1689 1689 MS2 20/36 Linfeng_20120130_CHD1_5.raw High VLDELTLTKADLEmQIESLTEELAYLKK Unambiguous 1 1 IPI00009865.4 M14(Oxidation) CID 1.0000 0.0000 1 1 273 3.85 0.00 2 0 100 3 1084.91187 3252.72104 1.16 55.22 7360 7360 MS2 23/108 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 3.84 0.00 1 20 100 3 412.23276 1234.68372 3.77 25.72 1657 1657 MS2 20/36 Linfeng_20120130_CHD1_3.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 3.83 0.00 1 26 25 3 738.03528 2212.09128 -3.05 32.36 3474 3474 MS2 38/72 Linfeng_091311_rIgG_1.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 507 3.82 0.00 0 5 26 2 1056.52771 2112.04814 3.01 46.94 6331 6331 MS2 17/34 Linfeng_20120130_CHD1_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.82 0.00 0 16 25 3 599.67566 1797.01242 0.39 48.10 5741 5741 MS2 30/60 Linfeng_091311_rIgG_3.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 3.81 0.00 0 6 100 2 998.99261 1996.97795 3.47 42.19 5106 5106 MS2 19/32 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.80 0.00 1 6 15 3 412.23297 1234.68436 4.29 25.73 1835 1835 MS2 21/36 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 488 3.79 0.00 1 3 100 2 717.89117 1434.77507 3.53 35.06 3521 3521 MS2 17/20 Linfeng_20120130_CHD1_1.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 270 3.79 0.00 0 29 25 3 789.75757 2367.25815 -1.95 46.05 5443 5443 MS2 28/80 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 519 3.79 0.00 1 17 95 3 412.23248 1234.68290 3.11 23.70 1568 1568 MS2 19/36 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.79 0.00 0 7 25 3 599.67621 1797.01407 1.31 54.23 6543 6543 MS2 29/60 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 539 3.79 0.00 0 38 100 2 695.84686 1390.68645 3.97 33.98 3483 3483 MS2 20/24 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 3.78 0.00 0 46 25 2 899.00482 1797.00237 -5.21 60.44 7111 7111 MS2 19/30 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.78 0.00 0 52 25 3 599.67566 1797.01242 0.39 50.06 6060 6060 MS2 29/60 Linfeng_091311_rIgG_2.raw High ADLEMQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.76 0.00 0 17 25 3 699.35669 2096.05552 4.13 53.24 5731 5731 MS2 27/68 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.74 0.00 0 13 25 3 599.67401 1797.00748 -2.36 46.86 5657 5657 MS2 30/60 Linfeng_091311_rIgG_2.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 138 3.73 0.00 1 14 25 4 763.91504 3052.63833 3.56 52.76 5682 5682 MS2 38/156 Linfeng_122411_rIgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 538 3.73 0.00 0 11 100 3 968.80304 2904.39457 4.07 1.21 174 174 MS2 28/104 Linfeng_20120130_CHD1_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 514 3.73 0.00 1 22 92 3 412.23224 1234.68216 2.51 26.50 1957 1957 MS2 20/36 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 569 3.72 0.00 0 9 100 2 695.84711 1390.68694 4.32 32.71 3034 3034 MS2 20/24 Linfeng_20120130_CHD1_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 205 3.72 0.00 0 3 11 2 683.32404 1365.64079 1.04 4.52 501 501 MS2 17/20 Linfeng_122411_rIgG_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 518 3.72 0.00 0 2 100 2 583.29779 1165.58830 3.00 21.06 1372 1372 MS2 15/16 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.71 0.00 0 9 25 3 599.67596 1797.01334 0.90 56.83 6787 6787 MS2 27/60 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 3.71 0.00 0 11 100 2 683.32562 1365.64397 3.37 21.03 1317 1317 MS2 16/20 Linfeng_20120130_CHD1_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 512 3.68 0.00 1 28 100 3 412.23218 1234.68198 2.36 27.61 2283 2283 MS2 19/36 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.68 0.00 0 11 25 3 599.67432 1797.00840 -1.85 45.58 5247 5247 MS2 28/60 Linfeng_091311_rIgG_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.68 0.00 0 46 25 3 599.67389 1797.00711 -2.56 59.11 6974 6974 MS2 27/60 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 176 3.67 0.00 0 4 15 2 683.32159 1365.63591 -2.53 22.97 2467 2467 MS2 17/20 Linfeng_091311_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.67 0.00 0 7 18 3 455.88498 1365.64038 0.74 4.52 502 502 MS2 24/40 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.67 0.00 0 26 25 3 599.67419 1797.00803 -2.05 46.61 5378 5378 MS2 27/60 Linfeng_091311_rIgG_1.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 119 3.67 0.00 0 30 25 2 854.39142 1707.77556 1.95 32.77 3064 3064 MS2 19/36 Linfeng_122411_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.66 0.00 1 15 71 3 412.23279 1234.68381 3.85 25.47 1661 1661 MS2 20/36 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.66 0.00 0 15 100 2 691.33051 1381.65373 3.99 26.37 1937 1937 MS2 17/22 Linfeng_20120130_CHD1_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 490 3.66 0.00 0 23 100 3 968.80084 2904.38797 1.80 0.99 141 141 MS2 27/104 Linfeng_20120130_CHD1_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 3.64 0.00 0 13 25 3 599.67554 1797.01206 0.19 46.69 5563 5563 MS2 30/60 Linfeng_091311_rIgG_3.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 3.64 0.00 0 24 7 3 781.66412 2342.97782 -2.84 36.03 3976 3976 MS2 38/104 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.64 0.00 1 18 78 3 412.23300 1234.68445 4.37 25.37 1651 1651 MS2 18/36 Linfeng_20120130_CHD1_2.raw High ELTTEIDNNIEQISSYKSEITELR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 3.63 0.00 1 8 25 3 942.47552 2825.41202 2.42 41.74 4294 4294 MS2 18/92 Linfeng_122411_rIgG_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 549 3.63 0.00 0 7 100 2 583.29858 1165.58989 4.36 23.63 1616 1616 MS2 15/16 Linfeng_20120130_CHD1_1.raw High NVSTGDVNVEMNAAPGVDLTQLLNNMR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 202 3.62 0.00 0 0 25 2 1436.70728 2872.40727 5.00 47.15 4981 4981 MS2 22/52 Linfeng_122411_rIgG_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 70 3.61 0.00 0 0 25 2 775.34119 1549.67510 -1.43 19.21 1946 1946 MS2 23/38 Linfeng_091311_rIgG_3.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 363 3.61 0.00 0 5 100 2 691.33038 1381.65349 3.81 25.75 1662 1662 MS2 17/22 Linfeng_20120130_CHD1_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 475 3.61 0.00 1 12 57 3 412.23288 1234.68409 4.07 24.70 1725 1725 MS2 20/36 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 215 3.61 0.00 0 23 25 3 599.67712 1797.01682 2.84 51.22 5495 5495 MS2 27/60 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 207 3.60 0.00 0 25 25 3 599.67792 1797.01920 4.16 52.12 6064 6064 MS2 24/60 Linfeng_091311_rIgG_1.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 516 3.60 0.00 0 52 93 3 704.68439 2112.03861 -1.50 48.66 6602 6602 MS2 26/68 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 3.60 0.00 1 13 76 3 412.23337 1234.68555 5.26 24.67 1722 1722 MS2 20/36 Linfeng_20120130_CHD1_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 339 3.60 0.00 0 3 100 2 691.32947 1381.65166 2.49 23.06 1514 1514 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 3.59 0.00 1 5 17 3 412.23303 1234.68454 4.44 24.71 1686 1686 MS2 21/36 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 445 3.59 0.00 1 13 100 3 412.23318 1234.68500 4.81 25.73 1691 1691 MS2 18/36 Linfeng_20120130_CHD1_2.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 70 3.59 0.00 0 1 25 2 775.34137 1549.67546 -1.19 19.23 1938 1938 MS2 25/38 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.59 0.00 1 15 78 3 412.23285 1234.68399 4.00 25.34 1647 1647 MS2 19/36 Linfeng_20120130_CHD1_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 175 3.58 0.00 0 3 25 2 683.32184 1365.63640 -2.18 23.29 2509 2509 MS2 17/20 Linfeng_091311_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 3.58 0.00 0 18 15 3 694.99097 2082.95835 -3.14 36.27 4290 4290 MS2 34/64 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.58 0.00 0 7 25 3 599.67719 1797.01700 2.94 42.67 4162 4162 MS2 29/60 Linfeng_122411_rIgG_9.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 129 3.57 0.00 0 22 25 3 569.92981 1707.77488 1.55 32.61 3142 3142 MS2 33/72 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.57 0.00 0 25 25 3 599.67480 1797.00986 -1.04 47.00 5573 5573 MS2 23/60 Linfeng_091311_rIgG_6.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 472 3.57 0.00 1 0 100 2 1106.54810 2212.08891 -4.12 45.53 6455 6455 MS2 15/36 Linfeng_20120130_CHD1_5.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 473 3.57 0.00 0 30 40 3 968.79871 2904.38156 -0.41 1.91 372 372 MS2 30/104 Linfeng_20120130_CHD1_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 3.57 0.00 0 32 100 3 599.67511 1797.01078 -0.53 48.74 6622 6622 MS2 18/60 Linfeng_20120130_CHD1_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.56 0.00 0 0 100 2 691.32965 1381.65203 2.75 23.30 1476 1476 MS2 17/22 Linfeng_20120130_CHD1_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 3.56 0.00 0 8 100 2 683.32562 1365.64397 3.37 20.80 1380 1380 MS2 16/20 Linfeng_20120130_CHD1_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 462 3.56 0.00 0 2 14 2 695.84204 1390.67681 -2.97 32.23 3263 3263 MS2 21/24 Linfeng_20120130_CHD1_5.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 3.56 0.00 0 3 25 2 775.34119 1549.67510 -1.43 19.28 1983 1983 MS2 24/38 Linfeng_091311_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 493 3.56 0.00 1 7 100 2 717.89148 1434.77568 3.96 36.05 3915 3915 MS2 16/20 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 525 3.55 0.00 0 9 100 2 998.98975 1996.97222 0.60 55.16 7344 7344 MS2 17/32 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 3.55 0.00 1 9 25 3 412.23218 1234.68198 2.36 23.82 1986 1986 MS2 21/36 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.54 0.00 0 17 25 3 599.67389 1797.00711 -2.56 44.94 5308 5308 MS2 29/60 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.53 0.00 1 15 71 3 412.23276 1234.68372 3.77 25.53 1670 1670 MS2 18/36 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.53 0.00 0 0 100 2 691.33014 1381.65300 3.46 25.58 1674 1674 MS2 17/22 Linfeng_20120130_CHD1_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 474 3.53 0.00 1 64 100 3 412.23300 1234.68445 4.37 27.59 2163 2163 MS2 20/36 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 225 3.53 0.00 0 27 25 3 599.67468 1797.00949 -1.24 48.42 5751 5751 MS2 23/60 Linfeng_091311_rIgG_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 531 3.53 0.00 0 5 100 2 695.84650 1390.68572 3.44 32.21 3266 3266 MS2 22/24 Linfeng_20120130_CHD1_10.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 3.53 0.00 0 26 25 2 998.98730 1996.96733 -1.85 39.06 4657 4657 MS2 22/32 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 448 3.52 0.00 1 3 0 3 412.23099 1234.67841 -0.53 3.65 369 369 MS2 22/36 Linfeng_122411_rIgG_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 3.52 0.00 0 0 25 2 775.34113 1549.67497 -1.50 19.50 1960 1960 MS2 24/38 Linfeng_091311_rIgG_7.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 526 3.51 0.00 0 6 100 3 968.80249 2904.39292 3.50 1.14 182 182 MS2 23/104 Linfeng_20120130_CHD1_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 3.50 0.00 0 24 25 3 599.67688 1797.01609 2.43 50.22 5370 5370 MS2 28/60 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 519 3.50 0.00 0 41 100 2 695.84656 1390.68584 3.53 34.12 3515 3515 MS2 16/24 Linfeng_20120130_CHD1_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.50 0.00 0 7 15 2 683.32416 1365.64104 1.22 3.11 290 290 MS2 17/20 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.50 0.00 1 76 100 3 412.23294 1234.68427 4.22 27.40 2130 2130 MS2 19/36 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 3.49 0.00 0 79 25 3 599.67719 1797.01700 2.94 54.12 6406 6406 MS2 28/60 Linfeng_091311_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 528 3.48 0.00 1 6 100 2 717.89142 1434.77556 3.87 35.39 3208 3208 MS2 16/20 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 336 3.47 0.00 0 3 100 2 691.33002 1381.65276 3.28 25.42 1807 1807 MS2 17/22 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.47 0.00 0 25 25 3 599.67389 1797.00711 -2.56 60.51 6929 6929 MS2 30/60 Linfeng_091311_rIgG_3.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 194 3.46 0.00 0 5 10 3 455.88324 1365.63517 -3.08 22.94 2496 2496 MS2 24/40 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.46 0.00 0 6 25 3 599.67523 1797.01114 -0.32 53.62 6386 6386 MS2 29/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 3.46 0.00 1 20 25 3 412.22986 1234.67502 -3.27 24.84 2721 2721 MS2 22/36 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 224 3.46 0.00 0 39 25 3 599.67542 1797.01169 -0.02 57.84 6868 6868 MS2 27/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.46 0.00 0 11 25 3 599.67413 1797.00785 -2.16 44.92 5405 5405 MS2 31/60 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 406 3.46 0.00 1 3 6 3 412.22964 1234.67438 -3.79 24.48 2415 2415 MS2 22/36 Linfeng_091311_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 406 3.45 0.00 1 6 6 3 412.22971 1234.67456 -3.64 24.51 2719 2719 MS2 22/36 Linfeng_091311_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 130 3.45 0.00 0 37 25 3 569.93011 1707.77579 2.08 32.44 3233 3233 MS2 30/72 Linfeng_122411_rIgG_4.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 568 3.45 0.00 1 19 100 3 738.04053 2212.10703 4.07 47.75 6349 6349 MS2 23/72 Linfeng_20120130_CHD1_4.raw High SQYEQLAEQNRKDAEAWFNEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.44 0.00 2 1 25 3 862.07483 2584.20993 1.38 33.67 3275 3275 MS2 31/80 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.44 0.00 0 65 25 3 599.67377 1797.00675 -2.77 59.80 6907 6907 MS2 28/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 3.44 0.00 1 70 100 3 412.23276 1234.68372 3.77 27.45 2138 2138 MS2 18/36 Linfeng_20120130_CHD1_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 520 3.42 0.00 0 14 100 3 968.80261 2904.39328 3.63 1.33 218 218 MS2 28/104 Linfeng_20120130_CHD1_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 3.42 0.00 0 4 25 2 683.32074 1365.63420 -3.78 22.85 2484 2484 MS2 16/20 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 187 3.42 0.00 0 5 25 3 455.88342 1365.63572 -2.68 22.99 2471 2471 MS2 24/40 Linfeng_091311_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 506 3.42 0.00 1 2 100 2 617.84460 1234.68193 2.33 23.89 1588 1588 MS2 17/18 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 558 3.42 0.00 0 26 100 2 695.84692 1390.68657 4.06 33.06 2776 2776 MS2 19/24 Linfeng_20120130_CHD1_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.41 0.00 0 12 25 3 455.88351 1365.63599 -2.48 23.31 2511 2511 MS2 23/40 Linfeng_091311_rIgG_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.41 0.00 0 19 100 2 691.33038 1381.65349 3.81 25.60 2123 2123 MS2 16/22 Linfeng_20120130_CHD1_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 532 3.41 0.00 1 6 100 2 717.89172 1434.77617 4.30 35.41 3091 3091 MS2 17/20 Linfeng_20120130_CHD1_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 508 3.40 0.00 1 4 100 2 617.84485 1234.68242 2.72 25.26 1750 1750 MS2 16/18 Linfeng_20120130_CHD1_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 455 3.40 0.00 1 20 100 2 617.84589 1234.68450 4.40 27.55 2119 2119 MS2 14/18 Linfeng_20120130_CHD1_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 205 3.40 0.00 0 4 6 2 683.32404 1365.64079 1.04 3.11 306 306 MS2 16/20 Linfeng_122411_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 473 3.40 0.00 1 26 100 2 717.89227 1434.77727 5.07 33.97 3292 3292 MS2 16/20 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 3.39 0.00 0 14 25 3 599.67456 1797.00913 -1.44 49.54 5922 5922 MS2 28/60 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 3.39 0.00 1 19 100 2 717.89166 1434.77605 4.21 34.28 2998 2998 MS2 16/20 Linfeng_20120130_CHD1_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 3.39 0.00 0 4 25 2 695.84546 1390.68364 1.95 28.40 2560 2560 MS2 22/24 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 489 3.39 0.00 1 3 100 2 617.84454 1234.68181 2.23 26.99 2045 2045 MS2 16/18 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 459 3.39 0.00 0 17 100 2 695.84399 1390.68071 -0.16 33.18 3516 3516 MS2 17/24 Linfeng_20120130_CHD1_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 3.38 0.00 0 2 25 2 695.84241 1390.67754 -2.44 29.81 3408 3408 MS2 22/24 Linfeng_091311_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 421 3.38 0.00 1 11 17 3 412.22992 1234.67521 -3.12 24.53 2687 2687 MS2 20/36 Linfeng_091311_rIgG_3.raw High SGGGGGGGGcGGGGGVSSLR Unambiguous 1 1 IPI00009865.4 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.38 0.00 0 3 25 2 775.33997 1549.67266 -3.00 2.01 259 259 MS2 24/38 Linfeng_091311_rIgG_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 521 3.38 0.00 0 52 100 2 998.99390 1996.98052 4.75 0.86 117 117 MS2 16/32 Linfeng_20120130_CHD1_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 325 3.38 0.00 0 12 6 2 695.84387 1390.68047 -0.33 27.79 2728 2728 MS2 22/24 Linfeng_122411_rIgG_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 3.37 0.00 0 6 100 2 695.84656 1390.68584 3.53 33.12 2643 2643 MS2 18/24 Linfeng_20120130_CHD1_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 506 3.37 0.00 1 15 100 2 717.89160 1434.77593 4.13 34.20 3706 3706 MS2 14/20 Linfeng_20120130_CHD1_10.raw High NQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 273 3.37 0.00 0 8 25 3 789.76111 2367.26877 2.54 44.00 4174 4174 MS2 23/80 Linfeng_122411_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 319 3.37 0.00 0 6 25 2 695.84607 1390.68486 2.83 29.09 2305 2305 MS2 19/24 Linfeng_122411_rIgG_7.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 193 3.36 0.00 0 3 14 3 455.88287 1365.63407 -3.88 22.68 2167 2167 MS2 25/40 Linfeng_091311_rIgG_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 509 3.36 0.00 1 30 100 2 717.89020 1434.77312 2.17 34.39 3654 3654 MS2 16/20 Linfeng_20120130_CHD1_8.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.36 0.00 0 7 5 2 683.32062 1365.63396 -3.96 22.67 2165 2165 MS2 17/20 Linfeng_091311_rIgG_1.raw High TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 143 3.35 0.00 1 24 25 4 763.91467 3052.63686 3.08 53.78 5800 5800 MS2 37/156 Linfeng_122411_rIgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 454 3.35 0.00 0 0 2 3 968.79718 2904.37699 -1.98 48.56 6567 6567 MS2 24/104 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.35 0.00 0 19 25 3 599.67480 1797.00986 -1.04 58.22 6732 6732 MS2 27/60 Linfeng_091311_rIgG_3.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 489 3.35 0.00 0 14 100 3 968.80103 2904.38852 1.99 1.09 162 162 MS2 29/104 Linfeng_20120130_CHD1_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.34 0.00 0 68 25 3 599.67377 1797.00675 -2.77 47.59 5639 5639 MS2 27/60 Linfeng_091311_rIgG_7.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 3.34 0.00 0 35 25 3 694.99506 2082.97062 2.75 35.15 3217 3217 MS2 31/64 Linfeng_122411_rIgG_9.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.34 0.00 0 23 25 3 455.88361 1365.63626 -2.27 23.04 2471 2471 MS2 23/40 Linfeng_091311_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 240 3.34 0.00 0 27 25 3 599.67389 1797.00711 -2.56 45.64 5430 5430 MS2 29/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 451 3.33 0.00 1 3 2 3 412.23126 1234.67923 0.14 3.39 333 333 MS2 20/36 Linfeng_122411_rIgG_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 540 3.33 0.00 0 19 100 2 583.29834 1165.58940 3.94 23.88 1521 1521 MS2 15/16 Linfeng_20120130_CHD1_2.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 464 3.33 0.00 1 0 72 2 1106.54822 2212.08916 -4.01 45.55 6461 6461 MS2 15/36 Linfeng_20120130_CHD1_5.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 3.33 0.00 0 16 25 3 455.88333 1365.63544 -2.88 23.27 2480 2480 MS2 23/40 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 414 3.33 0.00 1 41 25 3 412.22980 1234.67484 -3.42 24.84 2696 2696 MS2 22/36 Linfeng_091311_rIgG_7.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 155 3.33 0.00 0 9 13 2 691.32623 1381.64519 -2.19 3.32 313 313 MS2 18/22 Linfeng_122411_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 272 3.32 0.00 0 13 25 2 695.84247 1390.67766 -2.35 29.97 3157 3157 MS2 21/24 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 196 3.32 0.00 0 3 20 2 555.25049 1109.49370 3.45 34.01 3488 3488 MS2 13/16 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 493 3.31 0.00 1 6 100 2 717.89209 1434.77690 4.81 34.38 3018 3018 MS2 16/20 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 360 3.31 0.00 0 11 100 2 691.32928 1381.65129 2.22 25.36 1781 1781 MS2 17/22 Linfeng_20120130_CHD1_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 487 3.31 0.00 0 12 100 3 968.80133 2904.38944 2.30 1.99 346 346 MS2 29/104 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 3.31 0.00 0 5 100 2 691.32922 1381.65117 2.13 25.45 1885 1885 MS2 17/22 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 3.31 0.00 1 28 100 3 412.23273 1234.68363 3.70 27.86 2163 2163 MS2 19/36 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 526 3.30 0.00 1 13 100 2 717.89185 1434.77641 4.47 34.33 3007 3007 MS2 16/20 Linfeng_20120130_CHD1_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 3.30 0.00 1 4 13 3 412.22986 1234.67502 -3.27 24.55 2682 2682 MS2 22/36 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 551 3.30 0.00 1 42 100 2 717.89099 1434.77471 3.28 34.02 3492 3492 MS2 15/20 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 3.30 0.00 0 27 25 3 599.67413 1797.00785 -2.16 45.98 5445 5445 MS2 24/60 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.29 0.00 0 21 25 3 599.67389 1797.00711 -2.56 60.12 7073 7073 MS2 24/60 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 447 3.29 0.00 1 3 1 3 412.23099 1234.67841 -0.53 3.84 420 420 MS2 21/36 Linfeng_122411_rIgG_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.29 0.00 0 2 25 2 683.32068 1365.63408 -3.87 23.15 2440 2440 MS2 17/20 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 497 3.29 0.00 1 2 100 2 617.84521 1234.68315 3.31 24.24 1719 1719 MS2 17/18 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 509 3.29 0.00 1 3 53 2 617.84503 1234.68279 3.02 25.26 1854 1854 MS2 17/18 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.28 0.00 0 35 25 3 599.67487 1797.01004 -0.93 58.08 6627 6627 MS2 28/60 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 3.28 0.00 1 39 100 2 532.80988 1064.61247 2.41 23.53 1641 1641 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 458 3.28 0.00 1 3 100 2 617.84589 1234.68450 4.40 24.89 1603 1603 MS2 17/18 Linfeng_20120130_CHD1_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 425 3.28 0.00 1 8 25 3 412.22995 1234.67530 -3.05 24.73 2798 2798 MS2 22/36 Linfeng_091311_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 321 3.27 0.00 0 7 25 2 695.84381 1390.68035 -0.42 28.88 2880 2880 MS2 22/24 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 3.27 0.00 0 0 25 3 599.67426 1797.00821 -1.95 60.90 7008 7008 MS2 26/60 Linfeng_091311_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 156 3.27 0.00 0 3 7 2 691.32635 1381.64543 -2.02 3.91 414 414 MS2 18/22 Linfeng_122411_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 3.27 0.00 0 52 25 3 599.67401 1797.00748 -2.36 59.48 6833 6833 MS2 27/60 Linfeng_091311_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 462 3.26 0.00 1 4 100 2 617.84552 1234.68376 3.81 24.43 1691 1691 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 489 3.26 0.00 0 6 100 3 968.80084 2904.38797 1.80 1.80 324 324 MS2 27/104 Linfeng_20120130_CHD1_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.26 0.00 0 8 25 2 695.84570 1390.68413 2.30 28.44 2709 2709 MS2 22/24 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 3.26 0.00 1 28 100 2 532.81073 1064.61418 4.01 24.09 1617 1617 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 3.26 0.00 1 6 25 3 412.22971 1234.67456 -3.64 24.77 2686 2686 MS2 21/36 Linfeng_091311_rIgG_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 510 3.26 0.00 1 15 100 2 617.84534 1234.68340 3.51 27.90 2221 2221 MS2 17/18 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 493 3.25 0.00 1 1 100 2 617.84515 1234.68303 3.22 25.23 1618 1618 MS2 15/18 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 3.25 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.94 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 326 3.25 0.00 0 14 25 2 695.84192 1390.67656 -3.14 30.22 3490 3490 MS2 22/24 Linfeng_091311_rIgG_8.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 538 3.24 0.00 0 30 100 3 968.80304 2904.39457 4.07 11.42 1028 1028 MS2 28/104 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 3.24 0.00 1 7 100 2 532.81036 1064.61345 3.32 23.69 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_10.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 254 3.24 0.00 0 17 100 2 854.39215 1707.77703 2.81 39.72 3795 3795 MS2 18/36 Linfeng_20120130_CHD1_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 245 3.24 0.00 0 36 100 2 899.01019 1797.01311 0.77 56.16 8292 8292 MS2 15/30 Linfeng_20120130_CHD1_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 137 3.23 0.00 0 20 25 3 569.92957 1707.77414 1.12 32.37 2959 2959 MS2 34/72 Linfeng_122411_rIgG_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 442 3.23 0.00 1 1 74 2 617.84625 1234.68523 4.99 25.44 1812 1812 MS2 17/18 Linfeng_20120130_CHD1_1.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 182 3.22 0.00 0 29 25 3 694.99561 2082.97226 3.54 35.10 2571 2571 MS2 27/64 Linfeng_122411_rIgG_1.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 536 3.22 0.00 0 54 100 2 998.99475 1996.98223 5.61 1.44 243 243 MS2 16/32 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.22 0.00 1 3 100 2 532.81079 1064.61431 4.13 23.87 1929 1929 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 3.22 0.00 1 9 100 2 617.84552 1234.68376 3.81 27.78 2197 2197 MS2 16/18 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 230 3.22 0.00 0 5 25 3 599.67474 1797.00968 -1.14 46.91 5588 5588 MS2 31/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 407 3.21 0.00 1 5 22 3 412.22977 1234.67475 -3.49 24.84 2758 2758 MS2 21/36 Linfeng_091311_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 291 3.21 0.00 1 37 100 2 532.81067 1064.61406 3.90 23.49 1638 1638 MS2 14/16 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 3.21 0.00 0 0 25 3 599.67633 1797.01444 1.51 52.60 6278 6278 MS2 21/60 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 464 3.21 0.00 1 18 100 2 617.84583 1234.68437 4.30 26.45 1940 1940 MS2 16/18 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 3.20 0.00 1 2 55 2 617.84558 1234.68389 3.91 25.99 1875 1875 MS2 17/18 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 555 3.20 0.00 1 33 100 3 478.92996 1434.77533 3.72 36.65 4037 4037 MS2 18/40 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 253 3.20 0.00 0 27 100 2 899.01099 1797.01470 1.66 55.32 8088 8088 MS2 20/30 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 237 3.20 0.00 0 55 25 3 599.67352 1797.00602 -3.18 59.13 6703 6703 MS2 25/60 Linfeng_091311_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 3.20 0.00 0 45 25 3 599.67566 1797.01242 0.39 51.11 6081 6081 MS2 26/60 Linfeng_091311_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 539 3.20 0.00 1 9 100 2 717.89026 1434.77324 2.26 34.32 2923 2923 MS2 16/20 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 3.19 0.00 1 24 100 2 532.81024 1064.61321 3.10 24.20 1628 1628 MS2 14/16 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 3.19 0.00 0 24 25 3 599.67590 1797.01316 0.80 52.95 6227 6227 MS2 22/60 Linfeng_091311_rIgG_6.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 432 3.19 0.00 0 12 100 2 516.30463 1031.60198 3.51 34.81 2719 2719 MS2 14/16 Linfeng_20120130_CHD1_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 3.19 0.00 0 5 25 2 683.32196 1365.63664 -2.00 22.98 2463 2463 MS2 16/20 Linfeng_091311_rIgG_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 499 3.19 0.00 0 7 100 2 583.29755 1165.58782 2.58 21.32 1463 1463 MS2 14/16 Linfeng_20120130_CHD1_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 280 3.19 0.00 0 8 25 2 695.84137 1390.67546 -3.93 30.13 3552 3552 MS2 21/24 Linfeng_091311_rIgG_10.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 571 3.19 0.00 1 18 33 3 738.03656 2212.09513 -1.31 45.37 6415 6415 MS2 16/72 Linfeng_20120130_CHD1_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 550 3.18 0.00 1 25 100 2 717.89050 1434.77373 2.60 34.39 2934 2934 MS2 15/20 Linfeng_20120130_CHD1_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 431 3.18 0.00 1 12 13 2 617.84326 1234.67925 0.15 3.40 335 335 MS2 17/18 Linfeng_122411_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 3.18 0.00 0 21 25 2 683.32141 1365.63555 -2.80 23.18 2531 2531 MS2 17/20 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 3.18 0.00 0 18 25 3 599.67493 1797.01023 -0.83 59.25 6910 6910 MS2 27/60 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 499 3.18 0.00 1 7 100 2 617.84393 1234.68059 1.24 27.62 2284 2284 MS2 14/18 Linfeng_20120130_CHD1_5.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 513 3.18 0.00 0 12 100 2 583.29730 1165.58733 2.16 22.99 1509 1509 MS2 15/16 Linfeng_20120130_CHD1_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 338 3.17 0.00 0 5 100 2 691.32977 1381.65227 2.93 23.30 1622 1622 MS2 17/22 Linfeng_20120130_CHD1_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 384 3.17 0.00 0 3 14 2 516.30377 1031.60027 1.86 34.32 3794 3794 MS2 15/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.17 0.00 1 19 100 2 532.81055 1064.61382 3.67 25.40 1787 1787 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 467 3.16 0.00 1 2 45 2 617.84552 1234.68376 3.81 25.91 1864 1864 MS2 17/18 Linfeng_20120130_CHD1_4.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 176 3.16 0.00 0 6 25 2 683.32159 1365.63591 -2.53 23.24 2476 2476 MS2 17/20 Linfeng_091311_rIgG_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 229 3.16 0.00 0 0 25 3 599.67474 1797.00968 -1.14 49.03 5930 5930 MS2 24/60 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 3.16 0.00 0 32 25 3 599.67560 1797.01224 0.29 50.25 6011 6011 MS2 24/60 Linfeng_091311_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 3.15 0.00 0 4 25 2 695.84564 1390.68401 2.21 28.97 2837 2837 MS2 22/24 Linfeng_122411_rIgG_6.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 173 3.15 0.00 0 10 25 2 683.32178 1365.63628 -2.27 23.21 2468 2468 MS2 16/20 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 25 100 2 532.81049 1064.61370 3.55 25.51 1893 1893 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 517 3.15 0.00 1 69 100 3 412.23245 1234.68280 3.03 27.86 2334 2334 MS2 19/36 Linfeng_20120130_CHD1_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 559 3.15 0.00 0 17 100 2 695.84723 1390.68718 4.49 31.71 2978 2978 MS2 18/24 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 271 3.15 0.00 0 29 25 2 695.84259 1390.67790 -2.18 30.16 3420 3420 MS2 20/24 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 21 100 2 532.80975 1064.61223 2.18 24.32 1728 1728 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 329 3.15 0.00 1 0 100 2 532.81036 1064.61345 3.32 25.98 1682 1682 MS2 14/16 Linfeng_20120130_CHD1_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 237 3.14 0.00 0 81 25 3 599.67242 1797.00272 -5.01 60.58 6821 6821 MS2 23/60 Linfeng_091311_rIgG_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.14 0.00 0 7 25 2 695.84583 1390.68437 2.48 28.33 2581 2581 MS2 22/24 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 301 3.14 0.00 0 4 16 2 695.84277 1390.67827 -1.91 29.92 3416 3416 MS2 22/24 Linfeng_091311_rIgG_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 488 3.14 0.00 0 21 100 3 968.80133 2904.38944 2.30 1.61 259 259 MS2 31/104 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 3.14 0.00 0 15 100 2 691.32916 1381.65105 2.05 26.40 2040 2040 MS2 15/22 Linfeng_20120130_CHD1_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 3.14 0.00 0 0 100 2 691.33032 1381.65337 3.72 25.93 1740 1740 MS2 16/22 Linfeng_20120130_CHD1_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 505 3.14 0.00 1 0 100 2 717.89050 1434.77373 2.60 34.62 2658 2658 MS2 12/20 Linfeng_20120130_CHD1_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 562 3.13 0.00 1 36 100 3 478.92960 1434.77423 2.95 34.79 2716 2716 MS2 22/40 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.13 0.00 1 19 100 2 532.80963 1064.61199 1.95 24.50 1751 1751 MS2 14/16 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.13 0.00 0 20 25 3 599.67749 1797.01792 3.45 55.38 5961 5961 MS2 24/60 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 392 3.13 0.00 0 8 25 3 464.23264 1390.68335 1.74 28.42 2563 2563 MS2 21/48 Linfeng_122411_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 3.12 0.00 0 4 14 2 695.84210 1390.67693 -2.88 29.87 3455 3455 MS2 22/24 Linfeng_091311_rIgG_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 472 3.12 0.00 0 21 100 3 968.79883 2904.38193 -0.28 2.27 316 316 MS2 24/104 Linfeng_20120130_CHD1_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 430 3.12 0.00 0 13 100 2 695.84637 1390.68547 3.27 32.11 2464 2464 MS2 15/24 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 292 3.12 0.00 1 24 100 2 532.81067 1064.61406 3.90 23.92 1679 1679 MS2 14/16 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 3.11 0.00 0 19 25 3 599.67438 1797.00858 -1.75 45.04 5320 5320 MS2 26/60 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.11 0.00 1 0 100 2 532.81091 1064.61455 4.36 23.24 1566 1566 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 535 3.11 0.00 0 6 100 2 583.29822 1165.58916 3.73 24.01 1606 1606 MS2 15/16 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 496 3.10 0.00 1 11 100 2 717.89069 1434.77410 2.85 34.57 2686 2686 MS2 15/20 Linfeng_20120130_CHD1_6.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 160 3.10 0.00 0 1 1 2 691.32599 1381.64470 -2.55 4.31 496 496 MS2 18/22 Linfeng_122411_rIgG_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 571 3.10 0.00 0 22 100 2 695.84772 1390.68816 5.20 31.70 2831 2831 MS2 19/24 Linfeng_20120130_CHD1_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 340 3.10 0.00 1 38 100 2 619.29742 1237.58757 2.21 26.37 2034 2034 MS2 16/18 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.10 0.00 0 21 25 3 599.67444 1797.00876 -1.65 48.03 5806 5806 MS2 26/60 Linfeng_091311_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 491 3.10 0.00 1 4 100 2 617.84528 1234.68328 3.41 26.25 1709 1709 MS2 16/18 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 324 3.10 0.00 1 20 100 2 532.81042 1064.61357 3.44 24.13 1707 1707 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 491 3.10 0.00 1 2 19 2 617.84460 1234.68193 2.33 24.90 1713 1713 MS2 16/18 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 239 3.10 0.00 0 40 25 3 599.67267 1797.00345 -4.60 60.46 7029 7029 MS2 25/60 Linfeng_091311_rIgG_5.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 193 3.10 0.00 0 25 25 3 455.88275 1365.63370 -4.15 23.21 2448 2448 MS2 23/40 Linfeng_091311_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 592 3.09 0.00 0 13 100 2 601.31464 1201.62200 3.99 31.87 3006 3006 MS2 18/20 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 568 3.09 0.00 1 18 100 2 717.88916 1434.77104 0.73 35.52 2793 2793 MS2 14/20 Linfeng_20120130_CHD1_7.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 3.09 0.00 0 5 13 2 691.32605 1381.64482 -2.46 3.30 296 296 MS2 18/22 Linfeng_122411_rIgG_9.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 571 3.09 0.00 0 4 100 2 601.31494 1201.62261 4.50 32.12 2910 2910 MS2 18/20 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 627 3.08 0.00 1 74 17 3 478.92853 1434.77103 0.72 33.83 3673 3673 MS2 20/40 Linfeng_20120130_CHD1_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 540 3.08 0.00 1 5 26 3 478.92969 1434.77451 3.14 35.09 3728 3728 MS2 22/40 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 3.08 0.00 0 25 25 2 695.84448 1390.68169 0.54 25.69 2066 2066 MS2 22/24 Linfeng_122411_rIgG_10.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 3.08 0.00 0 9 25 2 695.84338 1390.67949 -1.04 29.02 2509 2509 MS2 21/24 Linfeng_122411_rIgG_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 3.08 0.00 1 3 100 2 532.81042 1064.61357 3.44 24.06 1655 1655 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 3.07 0.00 1 3 100 2 532.81097 1064.61467 4.47 24.97 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 193 3.07 0.00 0 7 67 2 555.25031 1109.49333 3.12 34.27 3722 3722 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 3.07 0.00 1 10 100 2 532.80975 1064.61223 2.18 25.31 1754 1754 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.07 0.00 1 26 100 2 532.81049 1064.61370 3.55 24.02 1607 1607 MS2 14/16 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 307 3.07 0.00 0 16 25 2 695.84241 1390.67754 -2.44 30.05 3369 3369 MS2 21/24 Linfeng_091311_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 589 3.07 0.00 0 5 100 2 601.31421 1201.62114 3.28 32.04 3044 3044 MS2 18/20 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 515 3.07 0.00 1 13 100 2 717.89044 1434.77361 2.51 35.42 3114 3114 MS2 14/20 Linfeng_20120130_CHD1_9.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 3.07 0.00 1 0 25 2 717.89130 1434.77532 3.70 20.84 1638 1638 MS2 16/20 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 508 3.06 0.00 1 6 100 2 617.84467 1234.68205 2.42 27.12 2073 2073 MS2 15/18 Linfeng_20120130_CHD1_4.raw High ELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 531 3.06 0.00 0 61 100 2 998.99561 1996.98393 6.47 0.82 99 99 MS2 14/32 Linfeng_20120130_CHD1_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 448 3.06 0.00 1 12 100 2 717.89197 1434.77666 4.64 34.06 3309 3309 MS2 16/20 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 3.06 0.00 0 17 25 3 599.67535 1797.01151 -0.12 52.12 6319 6319 MS2 28/60 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 277 3.06 0.00 0 2 25 2 695.84253 1390.67778 -2.26 30.15 3435 3435 MS2 22/24 Linfeng_091311_rIgG_6.raw High ELTTEIDNNIEQISSYKSEITELRR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 305 3.06 0.00 2 2 25 5 597.10828 2981.51228 2.00 39.49 4010 4010 MS2 50/192 Linfeng_122411_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 549 3.06 0.00 1 22 100 3 478.92972 1434.77460 3.21 36.21 3945 3945 MS2 19/40 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 446 3.05 0.00 1 3 1 3 412.23111 1234.67878 -0.23 3.38 352 352 MS2 19/36 Linfeng_122411_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 536 3.05 0.00 1 33 100 3 478.93015 1434.77588 4.10 34.31 3366 3366 MS2 21/40 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.05 0.00 1 26 100 2 532.81067 1064.61406 3.90 23.73 1661 1661 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.05 0.00 1 3 100 2 532.81061 1064.61394 3.78 24.30 1966 1966 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 3.04 0.00 1 4 100 2 532.81055 1064.61382 3.67 23.47 1866 1866 MS2 14/16 Linfeng_20120130_CHD1_10.raw High GSSGGGcFGGSSGGYGGLGGFGGGSFR Unambiguous 1 1 IPI00009865.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 43 3.04 0.00 0 0 25 3 781.66968 2342.99448 4.27 35.09 2569 2569 MS2 30/104 Linfeng_122411_rIgG_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 511 3.04 0.00 0 36 100 2 695.84668 1390.68608 3.70 33.94 3474 3474 MS2 17/24 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.04 0.00 1 36 100 2 532.80969 1064.61211 2.06 23.61 1650 1650 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 3.04 0.00 1 7 100 2 532.81049 1064.61370 3.55 23.60 1885 1885 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 309 3.04 0.00 1 3 100 2 532.81073 1064.61418 4.01 23.95 1936 1936 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.03 0.00 1 9 100 2 532.81067 1064.61406 3.90 25.32 2088 2088 MS2 14/16 Linfeng_20120130_CHD1_10.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 3.03 0.00 0 81 25 3 599.67682 1797.01590 2.33 42.65 4278 4278 MS2 21/60 Linfeng_122411_rIgG_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 165 3.03 0.00 0 3 55 2 555.24945 1109.49162 1.58 35.00 3959 3959 MS2 13/16 Linfeng_20120130_CHD1_5.raw High ADLEmQIESLTEELAYLKK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 565 3.03 0.00 1 25 82 3 747.38348 2240.13590 -0.38 48.65 6600 6600 MS2 21/72 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 511 3.03 0.00 1 1 100 2 617.84534 1234.68340 3.51 25.34 1648 1648 MS2 17/18 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 3.03 0.00 1 18 100 2 532.81061 1064.61394 3.78 24.22 1717 1717 MS2 14/16 Linfeng_20120130_CHD1_5.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 3.03 0.00 1 18 100 2 594.35504 1187.70281 2.81 38.10 4305 4305 MS2 15/18 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 583 3.03 0.00 0 22 100 2 695.84717 1390.68706 4.41 32.02 2580 2580 MS2 16/24 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 172 3.02 0.00 0 13 25 2 691.32391 1381.64055 -5.55 25.79 2897 2897 MS2 18/22 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 211 3.02 0.00 0 48 25 3 599.67755 1797.01810 3.55 52.95 5700 5700 MS2 24/60 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 500 3.02 0.00 1 12 100 2 617.84479 1234.68230 2.62 27.18 2085 2085 MS2 16/18 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 300 3.02 0.00 1 25 100 2 532.81085 1064.61443 4.24 23.80 1667 1667 MS2 14/16 Linfeng_20120130_CHD1_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 540 3.01 0.00 0 20 100 2 601.31531 1201.62334 5.11 31.67 2826 2826 MS2 15/20 Linfeng_20120130_CHD1_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 3.01 0.00 1 23 100 2 619.29688 1237.58647 1.32 27.38 2230 2230 MS2 15/18 Linfeng_20120130_CHD1_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 3.00 0.00 0 4 1 2 631.80219 1262.59709 -0.09 3.49 343 343 MS2 21/26 Linfeng_122411_rIgG_3.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 529 3.00 0.00 1 8 100 2 747.37250 1493.73772 2.26 18.34 1243 1243 MS2 14/22 Linfeng_20120130_CHD1_5.raw Medium TIDDLKNQILNLTTDNANILLQIDNAR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 133 3.00 0.00 1 15 25 4 763.91553 3052.64028 4.20 50.75 5512 5512 MS2 32/156 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.00 0.00 1 6 100 2 532.81055 1064.61382 3.67 23.43 1861 1861 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 2.99 0.00 1 6 25 3 412.23169 1234.68052 1.18 22.18 1931 1931 MS2 19/36 Linfeng_122411_rIgG_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 268 2.99 0.00 0 21 3 2 631.80231 1262.59734 0.10 3.66 392 392 MS2 21/26 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 410 2.99 0.00 1 24 25 3 412.23163 1234.68033 1.03 23.56 2155 2155 MS2 19/36 Linfeng_122411_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 519 2.99 0.00 1 72 100 3 412.23251 1234.68299 3.18 27.80 2322 2322 MS2 18/36 Linfeng_20120130_CHD1_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 467 2.99 0.00 1 2 100 2 617.84576 1234.68425 4.20 25.85 1704 1704 MS2 16/18 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 346 2.98 0.00 1 13 100 2 532.81012 1064.61296 2.87 23.87 1650 1650 MS2 13/16 Linfeng_20120130_CHD1_9.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 2.98 0.00 0 5 100 2 601.31500 1201.62273 4.60 31.94 2875 2875 MS2 17/20 Linfeng_20120130_CHD1_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 157 2.98 0.00 0 2 0 2 691.32587 1381.64446 -2.72 4.04 433 433 MS2 18/22 Linfeng_122411_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.97 0.00 0 21 25 3 599.67548 1797.01187 0.09 51.08 6187 6187 MS2 26/60 Linfeng_091311_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 193 2.97 0.00 0 4 93 2 555.25055 1109.49382 3.56 35.09 3146 3146 MS2 13/16 Linfeng_20120130_CHD1_2.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 484 2.97 0.00 0 17 100 3 968.80072 2904.38761 1.67 0.86 111 111 MS2 25/104 Linfeng_20120130_CHD1_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 469 2.97 0.00 1 31 100 2 617.84540 1234.68352 3.61 27.75 2191 2191 MS2 16/18 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 445 2.97 0.00 1 0 100 2 717.89227 1434.77727 5.07 34.40 2894 2894 MS2 15/20 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.97 0.00 1 5 100 2 532.81055 1064.61382 3.67 23.63 1890 1890 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 369 2.97 0.00 0 4 16 2 516.30475 1031.60222 3.75 34.21 3344 3344 MS2 15/16 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 609 2.96 0.00 1 31 100 3 478.92874 1434.77167 1.16 34.87 2687 2687 MS2 18/40 Linfeng_20120130_CHD1_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 2.96 0.00 0 87 25 3 599.67651 1797.01499 1.82 58.50 6279 6279 MS2 21/60 Linfeng_122411_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.96 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.16 1623 1623 MS2 13/16 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 216 2.96 0.00 0 20 25 3 599.67578 1797.01279 0.59 49.24 5884 5884 MS2 26/60 Linfeng_091311_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 2.96 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.39 1586 1586 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 510 2.96 0.00 1 2 100 2 617.84491 1234.68254 2.82 25.62 1718 1718 MS2 16/18 Linfeng_20120130_CHD1_7.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 303 2.96 0.00 0 5 25 2 695.84247 1390.67766 -2.35 30.15 3418 3418 MS2 22/24 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 197 2.96 0.00 0 2 51 2 555.25079 1109.49431 4.00 34.81 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.96 0.00 0 64 25 3 599.67621 1797.01407 1.31 53.17 6435 6435 MS2 30/60 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 453 2.96 0.00 0 9 100 2 695.84424 1390.68120 0.19 33.26 3535 3535 MS2 17/24 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.95 0.00 0 80 25 3 599.67566 1797.01242 0.39 51.70 6120 6120 MS2 26/60 Linfeng_091311_rIgG_6.raw High AETEcQNTEYQQLLDIK Unambiguous 1 1 IPI00009865.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 2.95 0.00 0 13 25 3 694.99121 2082.95908 -2.79 36.20 4356 4356 MS2 26/64 Linfeng_091311_rIgG_10.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 2.95 0.00 0 5 25 3 455.88330 1365.63535 -2.95 23.26 2542 2542 MS2 24/40 Linfeng_091311_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 559 2.95 0.00 1 40 100 3 478.92944 1434.77378 2.63 35.51 3111 3111 MS2 19/40 Linfeng_20120130_CHD1_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 228 2.95 0.00 0 50 25 3 599.67450 1797.00895 -1.54 49.39 5734 5734 MS2 25/60 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.94 0.00 1 4 100 2 532.81036 1064.61345 3.32 24.78 1581 1581 MS2 14/16 Linfeng_20120130_CHD1_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 515 2.93 0.00 0 3 13 2 695.84650 1390.68572 3.44 32.72 3195 3195 MS2 22/24 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 312 2.93 0.00 1 1 100 2 532.81091 1064.61455 4.36 23.62 1614 1614 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 509 2.93 0.00 1 9 100 2 617.84412 1234.68096 1.53 27.53 2263 2263 MS2 15/18 Linfeng_20120130_CHD1_5.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 366 2.93 0.00 1 23 25 3 738.03876 2212.10172 1.67 31.37 3095 3095 MS2 26/72 Linfeng_122411_rIgG_4.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 336 2.93 0.00 1 12 100 2 619.29773 1237.58818 2.70 26.93 2014 2014 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.92 0.00 0 10 25 3 599.67487 1797.01004 -0.93 58.32 6648 6648 MS2 22/60 Linfeng_091311_rIgG_1.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 2.92 0.00 0 17 25 3 455.88287 1365.63407 -3.88 23.10 2570 2570 MS2 19/40 Linfeng_091311_rIgG_10.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 517 2.92 0.00 1 6 100 2 747.37354 1493.73979 3.65 18.38 1215 1215 MS2 14/22 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.92 0.00 0 27 25 3 599.67621 1797.01407 1.31 53.01 6308 6308 MS2 22/60 Linfeng_091311_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 2.92 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.18 1561 1561 MS2 14/16 Linfeng_20120130_CHD1_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 2.92 0.00 0 4 44 2 516.30505 1031.60283 4.34 34.61 2941 2941 MS2 14/16 Linfeng_20120130_CHD1_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 548 2.92 0.00 1 34 100 3 478.92975 1434.77469 3.27 36.48 4002 4002 MS2 18/40 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.91 0.00 0 33 25 3 599.67450 1797.00895 -1.54 58.62 6805 6805 MS2 25/60 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 521 2.91 0.00 1 27 100 2 717.89185 1434.77641 4.47 35.56 3644 3644 MS2 15/20 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 296 2.91 0.00 1 4 100 2 532.81085 1064.61443 4.24 23.33 1578 1578 MS2 14/16 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 433 2.90 0.00 1 1 25 2 717.88934 1434.77141 0.98 4.56 512 512 MS2 17/20 Linfeng_122411_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 391 2.90 0.00 0 19 25 3 464.23270 1390.68354 1.87 28.33 2582 2582 MS2 21/48 Linfeng_122411_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 316 2.90 0.00 1 7 100 2 532.81097 1064.61467 4.47 24.70 1583 1583 MS2 13/16 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 158 2.90 0.00 0 0 10 2 691.32611 1381.64495 -2.37 3.56 336 336 MS2 18/22 Linfeng_122411_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 36 100 2 532.81061 1064.61394 3.78 23.80 1579 1579 MS2 15/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 205 2.90 0.00 0 3 15 2 555.25043 1109.49358 3.34 35.04 3716 3716 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 5 100 2 583.29779 1165.58830 3.00 23.71 1659 1659 MS2 15/16 Linfeng_20120130_CHD1_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 210 2.90 0.00 0 1 77 2 555.25043 1109.49358 3.34 34.44 2944 2944 MS2 13/16 Linfeng_20120130_CHD1_9.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 464 2.89 0.00 0 0 100 2 1056.52490 2112.04253 0.36 48.92 6713 6713 MS2 15/34 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 2.89 0.00 1 53 100 3 412.23288 1234.68409 4.07 28.60 2355 2355 MS2 18/36 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 419 2.89 0.00 1 5 25 3 412.23007 1234.67566 -2.75 24.80 2661 2661 MS2 19/36 Linfeng_091311_rIgG_5.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 339 2.89 0.00 1 20 100 2 619.29663 1237.58599 0.92 27.55 2269 2269 MS2 15/18 Linfeng_20120130_CHD1_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 222 2.88 0.00 0 35 25 3 599.67487 1797.01004 -0.93 53.15 6234 6234 MS2 23/60 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 2.88 0.00 1 3 100 2 532.81055 1064.61382 3.67 23.89 1639 1639 MS2 14/16 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 190 2.88 0.00 0 18 25 3 599.67682 1797.01590 2.33 57.20 6655 6655 MS2 27/60 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 2.88 0.00 0 78 25 3 599.67383 1797.00693 -2.67 59.17 7099 7099 MS2 21/60 Linfeng_091311_rIgG_8.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 221 2.87 0.00 0 21 25 3 599.67487 1797.01004 -0.93 50.68 6019 6019 MS2 26/60 Linfeng_091311_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 367 2.87 0.00 1 11 25 2 717.89026 1434.77324 2.26 26.83 2553 2553 MS2 17/20 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 210 2.87 0.00 0 45 25 3 599.67749 1797.01792 3.45 54.24 5839 5839 MS2 23/60 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 371 2.87 0.00 0 4 28 2 516.30505 1031.60283 4.34 34.55 3049 3049 MS2 15/16 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.87 0.00 1 5 100 2 532.81012 1064.61296 2.87 25.38 1759 1759 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.86 0.00 1 25 25 3 412.23221 1234.68207 2.44 23.88 1927 1927 MS2 18/36 Linfeng_122411_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.86 0.00 1 4 7 2 717.88702 1434.76677 -2.25 27.83 2866 2866 MS2 17/20 Linfeng_091311_rIgG_1.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 275 2.86 0.00 1 21 100 2 594.35468 1187.70207 2.19 37.97 4281 4281 MS2 15/18 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 197 2.86 0.00 0 2 30 2 555.25067 1109.49407 3.78 34.33 3372 3372 MS2 13/16 Linfeng_20120130_CHD1_1.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.86 0.00 0 19 25 3 599.67560 1797.01224 0.29 49.95 5928 5928 MS2 20/60 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 501 2.86 0.00 1 4 100 2 617.84430 1234.68132 1.83 25.11 1922 1922 MS2 14/18 Linfeng_20120130_CHD1_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 393 2.86 0.00 1 5 8 3 478.92923 1434.77314 2.18 26.82 2551 2551 MS2 25/40 Linfeng_122411_rIgG_6.raw High ADLEmQIESLTEELAYLK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 518 2.86 0.00 0 3 79 3 704.68445 2112.03879 -1.41 11.21 744 744 MS2 22/68 Linfeng_20120130_CHD1_5.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 187 2.86 0.00 0 19 25 2 683.32202 1365.63677 -1.91 23.02 2558 2558 MS2 16/20 Linfeng_091311_rIgG_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 315 2.86 0.00 1 2 100 2 532.81122 1064.61516 4.93 25.44 1813 1813 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.86 0.00 1 4 100 2 532.81036 1064.61345 3.32 23.48 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 168 2.86 0.00 0 20 25 2 691.32434 1381.64141 -4.93 26.07 2860 2860 MS2 17/22 Linfeng_091311_rIgG_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 550 2.85 0.00 1 31 100 3 478.93008 1434.77570 3.97 34.64 2947 2947 MS2 22/40 Linfeng_20120130_CHD1_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 397 2.85 0.00 0 4 100 2 516.30475 1031.60222 3.75 35.25 3761 3761 MS2 14/16 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 266 2.85 0.00 0 51 100 3 599.67572 1797.01261 0.49 48.80 6637 6637 MS2 21/60 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 549 2.85 0.00 1 26 100 3 478.92966 1434.77442 3.08 34.94 2738 2738 MS2 20/40 Linfeng_20120130_CHD1_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.85 0.00 0 4 12 2 631.80005 1262.59282 -3.48 22.32 2408 2408 MS2 21/26 Linfeng_091311_rIgG_2.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 242 2.84 0.00 0 34 25 3 599.67407 1797.00766 -2.26 59.14 6695 6695 MS2 23/60 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 331 2.83 0.00 1 1 100 2 532.81055 1064.61382 3.67 24.44 1692 1692 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 2.83 0.00 1 2 100 2 532.81061 1064.61394 3.78 23.75 1625 1625 MS2 14/16 Linfeng_20120130_CHD1_1.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 315 2.83 0.00 1 31 100 2 594.35565 1187.70403 3.84 38.04 4196 4196 MS2 14/18 Linfeng_20120130_CHD1_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 587 2.83 0.00 0 3 100 2 601.31488 1201.62248 4.40 31.91 2870 2870 MS2 16/20 Linfeng_20120130_CHD1_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 2.82 0.00 0 5 99 2 601.31500 1201.62273 4.60 32.19 2925 2925 MS2 17/20 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 340 2.82 0.00 1 11 100 2 532.81012 1064.61296 2.87 25.17 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_9.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 430 2.82 0.00 0 8 25 3 401.21097 1201.61835 0.96 4.63 518 518 MS2 27/40 Linfeng_122411_rIgG_10.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 402 2.82 0.00 0 0 100 2 516.30475 1031.60222 3.75 1.21 189 189 MS2 14/16 Linfeng_20120130_CHD1_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 509 2.82 0.00 0 17 100 2 695.84521 1390.68315 1.60 32.85 2435 2435 MS2 17/24 Linfeng_20120130_CHD1_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.82 0.00 0 30 25 3 599.67560 1797.01224 0.29 49.65 5902 5902 MS2 21/60 Linfeng_091311_rIgG_6.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.82 0.00 0 23 16 2 583.29584 1165.58440 -0.35 3.50 350 350 MS2 15/16 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 512 2.81 0.00 1 7 100 2 617.84503 1234.68279 3.02 26.85 2018 2018 MS2 15/18 Linfeng_20120130_CHD1_4.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 267 2.81 0.00 0 2 13 2 631.80273 1262.59819 0.78 4.61 514 514 MS2 21/26 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.80 0.00 1 21 100 2 532.81006 1064.61284 2.75 24.34 1640 1640 MS2 13/16 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 2.80 0.00 0 4 100 2 516.30511 1031.60295 4.46 34.85 3008 3008 MS2 14/16 Linfeng_20120130_CHD1_9.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 626 2.79 0.00 1 45 100 3 478.92871 1434.77158 1.10 34.54 3781 3781 MS2 22/40 Linfeng_20120130_CHD1_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 553 2.79 0.00 1 32 100 3 478.92975 1434.77469 3.27 36.60 4026 4026 MS2 20/40 Linfeng_20120130_CHD1_4.raw High NVSTGDVNVEmNAAPGVDLTQLLNNmR Unambiguous 1 1 IPI00009865.4 M11(Oxidation); M26(Oxidation) CID 1.0000 0.0000 1 1 464 2.79 0.00 0 25 100 3 968.79816 2904.37992 -0.98 11.75 1082 1082 MS2 25/104 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 164 2.78 0.00 0 4 25 2 691.32477 1381.64226 -4.32 26.05 2923 2923 MS2 17/22 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 409 2.78 0.00 1 19 25 3 412.23193 1234.68125 1.77 23.78 2138 2138 MS2 19/36 Linfeng_122411_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 461 2.78 0.00 1 4 100 2 617.84583 1234.68437 4.30 23.72 1906 1906 MS2 14/18 Linfeng_20120130_CHD1_10.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 472 2.78 0.00 1 2 100 2 617.84601 1234.68474 4.60 24.72 2018 2018 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 170 2.78 0.00 0 1 7 2 691.32379 1381.64031 -5.73 25.82 2591 2591 MS2 18/22 Linfeng_091311_rIgG_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 495 2.78 0.00 0 16 100 2 695.84705 1390.68682 4.23 32.05 2546 2546 MS2 16/24 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.78 0.00 1 18 100 2 532.80981 1064.61235 2.29 23.32 1845 1845 MS2 13/16 Linfeng_20120130_CHD1_10.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.77 0.00 0 3 13 2 631.80054 1262.59380 -2.70 22.32 2376 2376 MS2 21/26 Linfeng_091311_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 537 2.77 0.00 1 32 100 3 478.92981 1434.77488 3.40 34.66 2978 2978 MS2 19/40 Linfeng_20120130_CHD1_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 394 2.77 0.00 0 18 100 2 695.84613 1390.68498 2.91 32.67 2407 2407 MS2 17/24 Linfeng_20120130_CHD1_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 201 2.77 0.00 0 41 25 2 899.00897 1797.01067 -0.59 60.46 6974 6974 MS2 19/30 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 311 2.76 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.08 1551 1551 MS2 13/16 Linfeng_20120130_CHD1_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 370 2.76 0.00 0 9 13 3 464.23138 1390.67960 -0.96 27.80 2730 2730 MS2 21/48 Linfeng_122411_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 427 2.76 0.00 0 2 100 2 516.30371 1031.60015 1.74 34.79 2677 2677 MS2 14/16 Linfeng_20120130_CHD1_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.76 0.00 0 8 25 3 599.67548 1797.01187 0.09 56.89 6499 6499 MS2 23/60 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 171 2.76 0.00 0 3 100 2 555.25024 1109.49321 3.01 34.42 3662 3662 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 2.76 0.00 1 26 100 2 532.81055 1064.61382 3.67 24.38 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 553 2.76 0.00 1 45 100 3 478.92926 1434.77323 2.25 34.72 3730 3730 MS2 18/40 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 166 2.75 0.00 0 3 100 2 555.25024 1109.49321 3.01 34.05 2584 2584 MS2 13/16 Linfeng_20120130_CHD1_7.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 217 2.75 0.00 0 11 25 3 599.67566 1797.01242 0.39 52.27 6236 6236 MS2 23/60 Linfeng_091311_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.75 0.00 1 25 100 2 532.81055 1064.61382 3.67 23.97 1684 1684 MS2 14/16 Linfeng_20120130_CHD1_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 542 2.75 0.00 1 30 100 3 478.93005 1434.77561 3.91 34.67 3072 3072 MS2 23/40 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 165 2.75 0.00 0 1 25 2 691.32477 1381.64226 -4.32 26.00 2853 2853 MS2 18/22 Linfeng_091311_rIgG_9.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 2.75 0.00 1 3 3 2 747.37054 1493.73381 -0.35 3.56 359 359 MS2 16/22 Linfeng_122411_rIgG_6.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.75 0.00 0 37 25 3 599.67590 1797.01316 0.80 57.20 6175 6175 MS2 24/60 Linfeng_122411_rIgG_2.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 141 2.74 0.00 0 34 25 3 569.93066 1707.77744 3.05 32.57 2348 2348 MS2 33/72 Linfeng_122411_rIgG_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 508 2.74 0.00 0 26 100 2 695.84528 1390.68328 1.69 32.91 3319 3319 MS2 15/24 Linfeng_20120130_CHD1_8.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 352 2.74 0.00 1 40 100 2 619.29803 1237.58879 3.19 28.40 2312 2312 MS2 14/18 Linfeng_20120130_CHD1_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 567 2.74 0.00 0 27 100 2 695.84735 1390.68743 4.67 33.47 2853 2853 MS2 13/24 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.74 0.00 0 2 6 2 691.32452 1381.64177 -4.67 26.10 2892 2892 MS2 18/22 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.74 0.00 1 31 100 2 532.81006 1064.61284 2.75 24.29 1849 1849 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 453 2.74 0.00 1 25 100 2 617.84552 1234.68376 3.81 23.29 1571 1571 MS2 14/18 Linfeng_20120130_CHD1_1.raw High ADLEmQIESLTEELAYLKK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 559 2.74 0.00 1 29 100 3 747.38110 2240.12876 -3.57 48.90 6659 6659 MS2 19/72 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 456 2.73 0.00 1 25 100 2 617.84570 1234.68413 4.10 28.09 1922 1922 MS2 13/18 Linfeng_20120130_CHD1_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 209 2.73 0.00 0 45 100 2 555.25031 1109.49333 3.12 36.71 3351 3351 MS2 12/16 Linfeng_20120130_CHD1_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 554 2.73 0.00 1 46 100 3 478.93021 1434.77607 4.23 36.75 4057 4057 MS2 22/40 Linfeng_20120130_CHD1_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 163 2.72 0.00 0 1 25 2 691.32477 1381.64226 -4.32 25.91 2964 2964 MS2 17/22 Linfeng_091311_rIgG_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.72 0.00 1 9 100 2 532.81030 1064.61333 3.21 24.75 1710 1710 MS2 14/16 Linfeng_20120130_CHD1_9.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 220 2.72 0.00 0 0 25 3 599.67621 1797.01407 1.31 57.18 6721 6721 MS2 27/60 Linfeng_091311_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 470 2.72 0.00 0 18 100 2 516.30426 1031.60124 2.80 33.22 3310 3310 MS2 14/16 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 315 2.72 0.00 0 5 25 2 516.30347 1031.59966 1.27 30.01 2917 2917 MS2 15/16 Linfeng_122411_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.71 0.00 1 4 25 3 478.92975 1434.77469 3.27 22.89 1851 1851 MS2 24/40 Linfeng_122411_rIgG_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 389 2.71 0.00 0 18 25 3 464.23242 1390.68271 1.28 29.01 2842 2842 MS2 21/48 Linfeng_122411_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 486 2.71 0.00 1 24 100 2 617.84497 1234.68266 2.92 23.43 1590 1590 MS2 15/18 Linfeng_20120130_CHD1_1.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 466 2.71 0.00 0 15 100 2 695.84607 1390.68486 2.83 32.06 2304 2304 MS2 17/24 Linfeng_20120130_CHD1_7.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 525 2.70 0.00 1 8 100 2 717.89111 1434.77495 3.45 35.63 3261 3261 MS2 14/20 Linfeng_20120130_CHD1_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.70 0.00 0 6 25 2 691.32538 1381.64348 -3.43 26.01 2826 2826 MS2 18/22 Linfeng_091311_rIgG_5.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 2.70 0.00 1 54 100 2 619.29767 1237.58806 2.60 27.08 2063 2063 MS2 15/18 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 212 2.70 0.00 0 18 100 2 555.25116 1109.49504 4.66 33.80 2782 2782 MS2 14/16 Linfeng_20120130_CHD1_3.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 579 2.69 0.00 0 4 100 2 601.31494 1201.62261 4.50 32.27 2942 2942 MS2 18/20 Linfeng_20120130_CHD1_1.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 527 2.69 0.00 1 10 100 2 747.37372 1493.74016 3.90 18.40 1188 1188 MS2 14/22 Linfeng_20120130_CHD1_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 281 2.69 0.00 0 14 2 2 583.29529 1165.58330 -1.30 3.47 367 367 MS2 15/16 Linfeng_122411_rIgG_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 398 2.69 0.00 1 17 25 3 478.92935 1434.77350 2.44 22.54 1844 1844 MS2 21/40 Linfeng_122411_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.69 0.00 0 1 25 2 691.32471 1381.64214 -4.40 25.75 2855 2855 MS2 18/22 Linfeng_091311_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 414 2.69 0.00 1 5 25 2 717.88947 1434.77165 1.15 4.71 535 535 MS2 16/20 Linfeng_122411_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.69 0.00 1 7 100 2 532.81024 1064.61321 3.10 23.64 1498 1498 MS2 13/16 Linfeng_20120130_CHD1_3.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 431 2.69 0.00 0 6 67 2 695.84039 1390.67351 -5.34 32.49 3332 3332 MS2 21/24 Linfeng_20120130_CHD1_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.68 0.00 0 7 25 2 631.80084 1262.59441 -2.22 22.56 2409 2409 MS2 21/26 Linfeng_091311_rIgG_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 585 2.68 0.00 0 17 100 2 601.31403 1201.62078 2.97 31.97 2534 2534 MS2 16/20 Linfeng_20120130_CHD1_9.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 353 2.68 0.00 1 12 25 2 717.89020 1434.77312 2.17 25.70 2345 2345 MS2 17/20 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.68 0.00 1 38 100 2 532.81042 1064.61357 3.44 25.01 1914 1914 MS2 13/16 Linfeng_20120130_CHD1_8.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 2.68 0.00 0 4 23 2 631.79999 1262.59270 -3.57 22.58 2451 2451 MS2 21/26 Linfeng_091311_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 373 2.68 0.00 1 3 16 2 717.88654 1434.76579 -2.93 27.74 3165 3165 MS2 17/20 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 294 2.67 0.00 1 1 100 2 532.81067 1064.61406 3.90 24.90 1590 1590 MS2 13/16 Linfeng_20120130_CHD1_3.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 200 2.67 0.00 1 8 18 3 413.19846 1237.58081 -3.25 27.28 2791 2791 MS2 21/36 Linfeng_091311_rIgG_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 551 2.67 0.00 1 22 100 3 478.92972 1434.77460 3.21 35.02 2751 2751 MS2 18/40 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.67 0.00 1 22 100 2 532.81042 1064.61357 3.44 25.54 1806 1806 MS2 13/16 Linfeng_20120130_CHD1_4.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 2.67 0.00 1 27 100 2 619.29871 1237.59014 4.28 27.53 2116 2116 MS2 15/18 Linfeng_20120130_CHD1_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 180 2.67 0.00 1 20 25 2 619.29382 1237.58037 -3.61 27.23 3095 3095 MS2 16/18 Linfeng_091311_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 551 2.67 0.00 1 27 100 3 478.92969 1434.77451 3.14 35.90 3890 3890 MS2 19/40 Linfeng_20120130_CHD1_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 218 2.67 0.00 0 24 25 3 599.67548 1797.01187 0.09 57.72 6589 6589 MS2 27/60 Linfeng_091311_rIgG_7.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.66 0.00 0 17 25 2 601.31378 1201.62029 2.57 28.38 2759 2759 MS2 17/20 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 2.66 0.00 1 6 100 2 532.81012 1064.61296 2.87 23.57 1492 1492 MS2 14/16 Linfeng_20120130_CHD1_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 637 2.66 0.00 1 51 100 3 478.92813 1434.76984 -0.11 35.00 3890 3890 MS2 18/40 Linfeng_20120130_CHD1_10.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 335 2.66 0.00 0 8 25 2 583.29419 1165.58110 -3.18 24.11 2363 2363 MS2 15/16 Linfeng_091311_rIgG_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 382 2.66 0.00 0 11 100 2 631.80377 1262.60027 2.42 21.53 1405 1405 MS2 15/26 Linfeng_20120130_CHD1_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 577 2.66 0.00 0 7 100 2 601.31427 1201.62126 3.38 32.01 3036 3036 MS2 18/20 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 400 2.66 0.00 1 8 25 2 717.88800 1434.76872 -0.89 27.74 3121 3121 MS2 17/20 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 563 2.66 0.00 1 42 100 3 478.92923 1434.77314 2.18 34.88 3764 3764 MS2 22/40 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 403 2.65 0.00 1 16 25 2 617.84106 1234.67485 -3.41 24.56 2726 2726 MS2 17/18 Linfeng_091311_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 538 2.65 0.00 1 18 100 2 717.89075 1434.77422 2.94 34.99 3957 3957 MS2 14/20 Linfeng_20120130_CHD1_5.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 310 2.65 0.00 0 7 6 2 583.29443 1165.58159 -2.76 24.55 2627 2627 MS2 15/16 Linfeng_091311_rIgG_5.raw High GSLGGGFSSGGFSGGSFSR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 279 2.65 0.00 0 41 100 3 569.93085 1707.77799 3.37 39.26 4538 4538 MS2 20/72 Linfeng_20120130_CHD1_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 312 2.64 0.00 0 4 8 2 583.29468 1165.58208 -2.34 24.60 2688 2688 MS2 15/16 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.64 0.00 1 36 25 3 412.23221 1234.68207 2.44 23.68 2071 2071 MS2 20/36 Linfeng_122411_rIgG_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 179 2.64 0.00 0 10 20 2 555.24902 1109.49077 0.81 33.96 3706 3706 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.63 0.00 1 33 100 2 532.80994 1064.61260 2.52 23.82 1815 1815 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 478 2.63 0.00 0 13 100 2 516.30463 1031.60198 3.51 1.32 200 200 MS2 14/16 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 159 2.63 0.00 0 23 25 2 691.32977 1381.65227 2.93 24.98 1912 1912 MS2 15/22 Linfeng_122411_rIgG_9.raw High ADLEmQIESLTEELAYLKK Unambiguous 1 1 IPI00009865.4 M5(Oxidation) CID 1.0000 0.0000 1 1 526 2.63 0.00 1 12 100 3 747.38727 2240.14725 4.69 2.29 177 177 MS2 18/72 Linfeng_20120130_CHD1_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 166 2.63 0.00 0 2 7 2 691.32452 1381.64177 -4.67 25.83 2858 2858 MS2 18/22 Linfeng_091311_rIgG_4.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 309 2.63 0.00 0 5 9 2 583.29370 1165.58013 -4.02 24.56 2718 2718 MS2 15/16 Linfeng_091311_rIgG_8.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 313 2.63 0.00 0 6 13 2 583.29407 1165.58086 -3.39 24.26 2643 2643 MS2 15/16 Linfeng_091311_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 564 2.63 0.00 1 78 71 3 478.92941 1434.77369 2.57 34.36 3806 3806 MS2 20/40 Linfeng_20120130_CHD1_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 406 2.62 0.00 0 20 100 2 516.30536 1031.60344 4.93 33.19 3135 3135 MS2 13/16 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 554 2.62 0.00 1 4 100 3 478.92929 1434.77332 2.31 35.35 3593 3593 MS2 20/40 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 2.62 0.00 1 8 100 2 532.81030 1064.61333 3.21 25.05 1733 1733 MS2 13/16 Linfeng_20120130_CHD1_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 357 2.62 0.00 0 39 25 3 464.23050 1390.67694 -2.87 29.93 3463 3463 MS2 22/48 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 185 2.62 0.00 0 22 25 3 455.88330 1365.63535 -2.95 23.25 2473 2473 MS2 20/40 Linfeng_091311_rIgG_9.raw High SKELTTEIDNNIEQISSYK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 458 2.62 0.00 1 2 100 2 1106.55408 2212.10088 1.29 46.20 5994 5994 MS2 13/36 Linfeng_20120130_CHD1_1.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 350 2.62 0.00 1 8 25 2 717.89166 1434.77605 4.21 21.85 1737 1737 MS2 17/20 Linfeng_122411_rIgG_3.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 2.62 0.00 1 25 100 2 619.29810 1237.58891 3.29 27.07 2345 2345 MS2 13/18 Linfeng_20120130_CHD1_10.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.62 0.00 0 6 6 2 583.29388 1165.58049 -3.71 24.23 2678 2678 MS2 15/16 Linfeng_091311_rIgG_2.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 484 2.61 0.00 0 34 100 2 695.84589 1390.68450 2.56 31.73 3143 3143 MS2 17/24 Linfeng_20120130_CHD1_5.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 517 2.61 0.00 0 46 100 2 695.84686 1390.68645 3.97 31.91 3099 3099 MS2 14/24 Linfeng_20120130_CHD1_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 391 2.61 0.00 0 12 100 2 516.30475 1031.60222 3.75 33.83 2850 2850 MS2 13/16 Linfeng_20120130_CHD1_9.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 2.61 0.00 0 8 25 2 691.33063 1381.65398 4.17 25.05 1792 1792 MS2 16/22 Linfeng_122411_rIgG_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 164 2.61 0.00 0 3 0 2 691.32690 1381.64653 -1.22 3.84 428 428 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 189 2.61 0.00 0 31 25 2 691.32941 1381.65154 2.40 24.86 2232 2232 MS2 17/22 Linfeng_122411_rIgG_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 546 2.60 0.00 1 31 100 3 478.92978 1434.77478 3.33 35.16 2773 2773 MS2 21/40 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 202 2.60 0.00 0 26 100 2 555.25055 1109.49382 3.56 36.48 3848 3848 MS2 13/16 Linfeng_20120130_CHD1_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.60 0.00 0 21 25 2 691.32831 1381.64934 0.81 24.84 2331 2331 MS2 17/22 Linfeng_122411_rIgG_5.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 223 2.60 0.00 0 18 25 3 599.67633 1797.01444 1.51 55.55 6668 6668 MS2 22/60 Linfeng_091311_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 582 2.59 0.00 1 18 100 2 717.88965 1434.77202 1.41 35.22 3942 3942 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 321 2.59 0.00 0 19 25 2 583.29761 1165.58794 2.68 21.33 1821 1821 MS2 15/16 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.59 0.00 1 2 100 2 532.81055 1064.61382 3.67 25.71 1688 1688 MS2 13/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 219 2.59 0.00 0 14 100 2 555.25037 1109.49346 3.23 34.98 2746 2746 MS2 13/16 Linfeng_20120130_CHD1_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 494 2.59 0.00 1 11 100 2 617.84528 1234.68328 3.41 24.22 1542 1542 MS2 12/18 Linfeng_20120130_CHD1_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 466 2.59 0.00 1 13 100 2 617.84583 1234.68437 4.30 27.80 2155 2155 MS2 14/18 Linfeng_20120130_CHD1_1.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 175 2.59 0.00 0 18 25 2 691.32806 1381.64885 0.46 24.27 2207 2207 MS2 18/22 Linfeng_122411_rIgG_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 388 2.59 0.00 0 31 25 3 464.23242 1390.68271 1.28 28.45 2711 2711 MS2 19/48 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 320 2.59 0.00 1 24 100 2 532.81085 1064.61443 4.24 24.44 1862 1862 MS2 14/16 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.59 0.00 0 20 100 2 555.25104 1109.49480 4.44 33.32 3163 3163 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.59 0.00 1 9 100 2 532.81049 1064.61370 3.55 23.74 1505 1505 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 303 2.59 0.00 1 7 100 2 532.81079 1064.61431 4.13 23.75 1912 1912 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 435 2.58 0.00 0 5 6 2 516.30450 1031.60173 3.28 34.23 3540 3540 MS2 15/16 Linfeng_20120130_CHD1_4.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 213 2.58 0.00 1 19 25 3 413.20056 1237.58713 1.85 4.66 527 527 MS2 24/36 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.58 0.00 0 24 100 2 555.25079 1109.49431 4.00 35.65 3144 3144 MS2 13/16 Linfeng_20120130_CHD1_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 492 2.58 0.00 1 1 100 2 617.84528 1234.68328 3.41 25.73 2142 2142 MS2 15/18 Linfeng_20120130_CHD1_10.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 186 2.58 0.00 0 0 25 2 691.32886 1381.65044 1.60 24.93 1867 1867 MS2 17/22 Linfeng_122411_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.57 0.00 0 10 13 2 555.24963 1109.49199 1.91 31.59 3010 3010 MS2 13/16 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.57 0.00 0 23 100 2 555.24982 1109.49236 2.24 35.33 3968 3968 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.57 0.00 1 37 100 2 532.81024 1064.61321 3.10 24.97 1910 1910 MS2 13/16 Linfeng_20120130_CHD1_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.57 0.00 1 1 25 2 717.88727 1434.76726 -1.91 28.02 3128 3128 MS2 17/20 Linfeng_091311_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 212 2.56 0.00 0 32 100 2 555.25049 1109.49370 3.45 38.24 4334 4334 MS2 12/16 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 488 2.56 0.00 1 14 100 2 617.84491 1234.68254 2.82 24.52 1696 1696 MS2 15/18 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.55 0.00 1 22 100 2 532.81012 1064.61296 2.87 25.25 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.55 0.00 0 9 25 3 401.20950 1201.61396 -2.70 29.45 3397 3397 MS2 26/40 Linfeng_091311_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 323 2.55 0.00 0 6 9 2 516.30341 1031.59953 1.15 29.90 2789 2789 MS2 15/16 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 86 2.55 0.00 0 11 16 2 555.25000 1109.49272 2.57 31.47 2963 2963 MS2 13/16 Linfeng_122411_rIgG_3.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 261 2.55 0.00 0 10 25 2 631.80273 1262.59819 0.78 3.27 315 315 MS2 20/26 Linfeng_122411_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 215 2.55 0.00 0 49 100 2 555.25073 1109.49419 3.89 36.56 4017 4017 MS2 13/16 Linfeng_20120130_CHD1_4.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 262 2.55 0.00 1 14 25 3 396.57211 1187.70179 1.95 28.70 2801 2801 MS2 23/36 Linfeng_122411_rIgG_6.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 328 2.55 0.00 1 28 25 2 717.89166 1434.77605 4.21 21.34 1718 1718 MS2 17/20 Linfeng_122411_rIgG_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 2.55 0.00 1 4 25 2 717.88757 1434.76787 -1.49 27.73 3126 3126 MS2 17/20 Linfeng_091311_rIgG_3.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 241 2.54 0.00 0 40 25 3 599.67426 1797.00821 -1.95 59.32 6741 6741 MS2 23/60 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 339 2.54 0.00 1 28 100 2 532.81061 1064.61394 3.78 25.65 1820 1820 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 197 2.54 0.00 0 27 25 2 691.32922 1381.65117 2.13 24.96 2103 2103 MS2 17/22 Linfeng_122411_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 2.54 0.00 0 10 100 2 516.30420 1031.60112 2.69 2.06 416 416 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 479 2.54 0.00 1 3 100 2 617.84454 1234.68181 2.23 26.27 1837 1837 MS2 15/18 Linfeng_20120130_CHD1_9.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.53 0.00 1 3 25 3 478.92984 1434.77497 3.46 21.83 1735 1735 MS2 24/40 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 467 2.53 0.00 1 56 100 2 617.84546 1234.68364 3.71 28.21 2017 2017 MS2 14/18 Linfeng_20120130_CHD1_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 438 2.53 0.00 0 4 100 2 516.30334 1031.59941 1.03 0.73 83 83 MS2 14/16 Linfeng_20120130_CHD1_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 436 2.53 0.00 0 18 50 2 516.30377 1031.60027 1.86 1.88 362 362 MS2 14/16 Linfeng_20120130_CHD1_8.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 295 2.52 0.00 1 4 13 2 747.36829 1493.72930 -3.38 2.11 274 274 MS2 15/22 Linfeng_091311_rIgG_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 204 2.52 0.00 1 20 25 3 413.19855 1237.58109 -3.03 27.54 3084 3084 MS2 17/36 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.52 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.01 1827 1827 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 2.52 0.00 0 4 3 2 583.29547 1165.58367 -0.98 3.72 382 382 MS2 15/16 Linfeng_122411_rIgG_3.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 351 2.52 0.00 1 50 100 2 619.29779 1237.58830 2.80 27.16 2081 2081 MS2 15/18 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.51 0.00 0 3 3 2 516.30286 1031.59844 0.08 3.52 337 337 MS2 15/16 Linfeng_122411_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 90 2.51 0.00 0 12 25 2 555.24683 1109.48638 -3.15 33.12 3823 3823 MS2 13/16 Linfeng_091311_rIgG_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 204 2.51 0.00 0 33 100 2 555.25085 1109.49443 4.11 36.72 3498 3498 MS2 12/16 Linfeng_20120130_CHD1_2.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 418 2.50 0.00 1 6 25 3 478.92654 1434.76508 -3.43 28.02 3130 3130 MS2 21/40 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 86 2.50 0.00 0 9 23 2 555.24951 1109.49175 1.69 31.61 3126 3126 MS2 13/16 Linfeng_122411_rIgG_4.raw High NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 265 2.50 0.00 0 39 100 3 599.67584 1797.01297 0.70 55.15 5827 5827 MS2 26/60 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.50 0.00 1 42 100 2 532.81000 1064.61272 2.64 23.56 1795 1795 MS2 13/16 Linfeng_20120130_CHD1_8.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 352 2.49 0.00 1 24 100 2 594.35425 1187.70122 1.47 37.92 4270 4270 MS2 14/18 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.49 0.00 1 29 100 2 532.81012 1064.61296 2.87 24.73 1888 1888 MS2 13/16 Linfeng_20120130_CHD1_8.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 595 2.49 0.00 0 3 69 2 601.31445 1201.62163 3.69 32.14 3064 3064 MS2 18/20 Linfeng_20120130_CHD1_4.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 219 2.48 0.00 0 38 25 3 599.67505 1797.01059 -0.63 56.36 6631 6631 MS2 20/60 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 90 2.48 0.00 0 8 4 2 555.24835 1109.48943 -0.40 31.48 3238 3238 MS2 13/16 Linfeng_122411_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 449 2.48 0.00 0 19 100 2 516.30463 1031.60198 3.51 33.61 3579 3579 MS2 15/16 Linfeng_20120130_CHD1_10.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 238 2.48 0.00 0 2 25 2 631.80017 1262.59307 -3.28 22.33 2372 2372 MS2 21/26 Linfeng_091311_rIgG_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 590 2.48 0.00 0 3 50 2 601.31439 1201.62151 3.58 32.31 3103 3103 MS2 17/20 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 2.48 0.00 1 29 100 2 532.81079 1064.61431 4.13 24.41 1859 1859 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 82 2.47 0.00 0 16 25 2 555.24988 1109.49248 2.35 31.23 2714 2714 MS2 13/16 Linfeng_122411_rIgG_9.raw Medium RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 330 2.47 0.00 1 17 25 3 396.57196 1187.70133 1.56 27.94 2499 2499 MS2 25/36 Linfeng_122411_rIgG_3.raw Medium IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.47 0.00 1 11 25 3 478.92978 1434.77478 3.33 23.89 1967 1967 MS2 21/40 Linfeng_122411_rIgG_3.raw Medium KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 203 2.47 0.00 1 14 25 3 413.20016 1237.58594 0.89 25.89 2427 2427 MS2 21/36 Linfeng_122411_rIgG_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 376 2.47 0.00 0 28 25 2 601.31360 1201.61992 2.26 27.87 2633 2633 MS2 17/20 Linfeng_122411_rIgG_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 209 2.46 0.00 0 20 25 2 691.33124 1381.65520 5.05 19.26 1519 1519 MS2 17/22 Linfeng_122411_rIgG_2.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 191 2.46 0.00 0 10 25 2 691.33014 1381.65300 3.46 21.81 1767 1767 MS2 16/22 Linfeng_122411_rIgG_2.raw Medium NVQALEIELQSQLALK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 2.46 0.00 0 39 46 3 599.67554 1797.01206 0.19 55.14 7364 7364 MS2 26/60 Linfeng_20120130_CHD1_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 2.45 0.00 0 11 25 2 583.29437 1165.58147 -2.87 24.25 2647 2647 MS2 15/16 Linfeng_091311_rIgG_3.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 312 2.45 0.00 0 10 25 2 583.29431 1165.58135 -2.97 24.51 2651 2651 MS2 15/16 Linfeng_091311_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 208 2.45 0.00 0 16 100 2 555.25037 1109.49346 3.23 33.96 2597 2597 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 211 2.45 0.00 0 46 100 2 555.25049 1109.49370 3.45 32.99 3256 3256 MS2 12/16 Linfeng_20120130_CHD1_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 534 2.44 0.00 0 12 100 2 601.31470 1201.62212 4.09 31.92 2565 2565 MS2 12/20 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 88 2.43 0.00 0 4 4 2 555.24835 1109.48943 -0.40 32.06 3240 3240 MS2 14/16 Linfeng_122411_rIgG_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 246 2.43 0.00 0 3 25 2 631.80035 1262.59343 -2.99 22.54 2373 2373 MS2 21/26 Linfeng_091311_rIgG_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 501 2.43 0.00 0 24 100 2 695.84491 1390.68254 1.16 32.80 2427 2427 MS2 16/24 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.43 0.00 0 16 100 2 555.24994 1109.49260 2.46 33.44 2781 2781 MS2 12/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 85 2.43 0.00 0 13 5 2 555.24652 1109.48577 -3.70 32.96 3554 3554 MS2 13/16 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 84 2.42 0.00 0 10 5 2 555.24640 1109.48552 -3.92 32.90 3858 3858 MS2 13/16 Linfeng_091311_rIgG_2.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 502 2.42 0.00 0 12 100 2 545.77045 1090.53362 2.38 20.76 1347 1347 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.42 0.00 0 13 25 2 691.33075 1381.65422 4.34 26.45 2020 2020 MS2 12/22 Linfeng_122411_rIgG_7.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 252 2.42 0.00 0 31 25 2 631.80365 1262.60002 2.23 21.36 1619 1619 MS2 16/26 Linfeng_122411_rIgG_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 211 2.42 0.00 0 1 100 2 555.25098 1109.49468 4.33 34.08 2959 2959 MS2 13/16 Linfeng_20120130_CHD1_2.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 336 2.42 0.00 0 13 25 2 583.29254 1165.57781 -6.01 24.40 2749 2749 MS2 15/16 Linfeng_091311_rIgG_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.41 0.00 0 19 25 2 555.24890 1109.49053 0.59 31.21 2804 2804 MS2 13/16 Linfeng_122411_rIgG_10.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.41 0.00 0 11 25 2 601.31348 1201.61968 2.06 27.82 2484 2484 MS2 18/20 Linfeng_122411_rIgG_3.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 401 2.41 0.00 1 20 25 2 717.88739 1434.76750 -1.74 27.92 3084 3084 MS2 17/20 Linfeng_091311_rIgG_5.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 306 2.41 0.00 0 26 25 2 583.29437 1165.58147 -2.87 24.46 2642 2642 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 320 2.41 0.00 0 5 9 2 516.30383 1031.60039 1.98 29.88 2755 2755 MS2 15/16 Linfeng_122411_rIgG_3.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 284 2.41 0.00 1 9 22 2 498.26385 995.52043 0.75 3.24 310 310 MS2 11/12 Linfeng_122411_rIgG_2.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 600 2.40 0.00 0 13 100 2 497.25470 993.50212 2.12 24.52 1661 1661 MS2 12/14 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.40 0.00 0 4 100 2 555.24994 1109.49260 2.46 35.07 2713 2713 MS2 14/16 Linfeng_20120130_CHD1_7.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.40 0.00 0 13 25 2 691.32953 1381.65178 2.58 24.90 1969 1969 MS2 17/22 Linfeng_122411_rIgG_10.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 470 2.39 0.00 0 10 100 2 516.30426 1031.60124 2.80 0.79 94 94 MS2 13/16 Linfeng_20120130_CHD1_6.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 250 2.39 0.00 0 17 25 2 631.79962 1262.59197 -4.15 22.43 2343 2343 MS2 21/26 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 499 2.39 0.00 1 11 100 2 617.84497 1234.68266 2.92 24.10 1834 1834 MS2 13/18 Linfeng_20120130_CHD1_8.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 352 2.38 0.00 1 34 100 2 619.29803 1237.58879 3.19 28.65 2366 2366 MS2 14/18 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 2.38 0.00 0 16 100 2 516.30444 1031.60161 3.16 1.04 153 153 MS2 14/16 Linfeng_20120130_CHD1_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 460 2.38 0.00 1 24 100 2 617.84583 1234.68437 4.30 23.35 1581 1581 MS2 13/18 Linfeng_20120130_CHD1_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 413 2.37 0.00 0 7 25 2 601.31311 1201.61894 1.45 4.63 493 493 MS2 17/20 Linfeng_122411_rIgG_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 438 2.37 0.00 0 33 100 2 695.84497 1390.68266 1.25 32.87 3309 3309 MS2 14/24 Linfeng_20120130_CHD1_8.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 315 2.37 0.00 1 39 100 2 594.35510 1187.70293 2.91 37.93 4172 4172 MS2 14/18 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.36 0.00 0 16 21 2 555.24707 1109.48686 -2.71 32.81 3807 3807 MS2 13/16 Linfeng_091311_rIgG_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 225 2.36 0.00 0 29 100 2 555.25037 1109.49346 3.23 35.16 3828 3828 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 408 2.36 0.00 0 15 100 2 516.30389 1031.60051 2.09 0.99 149 149 MS2 14/16 Linfeng_20120130_CHD1_7.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 408 2.36 0.00 0 36 25 2 601.31293 1201.61858 1.15 26.15 2212 2212 MS2 12/20 Linfeng_122411_rIgG_8.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.36 0.00 0 21 25 2 516.30408 1031.60088 2.45 29.16 2445 2445 MS2 15/16 Linfeng_122411_rIgG_9.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 319 2.36 0.00 0 31 25 2 583.29761 1165.58794 2.68 23.40 1936 1936 MS2 15/16 Linfeng_122411_rIgG_2.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 374 2.36 0.00 0 16 100 2 631.80426 1262.60124 3.19 21.35 1418 1418 MS2 16/26 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 91 2.36 0.00 0 19 25 2 555.24927 1109.49126 1.25 31.50 2901 2901 MS2 14/16 Linfeng_122411_rIgG_8.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 303 2.35 0.00 0 8 3 2 497.25391 993.50054 0.52 3.30 319 319 MS2 13/14 Linfeng_122411_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.35 0.00 1 27 100 2 532.81036 1064.61345 3.32 24.10 1833 1833 MS2 14/16 Linfeng_20120130_CHD1_8.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 256 2.35 0.00 1 21 25 2 594.35443 1187.70159 1.78 27.92 2497 2497 MS2 15/18 Linfeng_122411_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 439 2.34 0.00 0 20 100 2 516.30359 1031.59990 1.50 0.81 107 107 MS2 14/16 Linfeng_20120130_CHD1_7.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 290 2.34 0.00 1 10 25 2 747.36823 1493.72917 -3.46 20.58 2095 2095 MS2 14/22 Linfeng_091311_rIgG_9.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.34 0.00 0 0 25 2 695.84717 1390.68706 4.41 29.05 2074 2074 MS2 16/24 Linfeng_122411_rIgG_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 411 2.34 0.00 1 4 20 2 617.84155 1234.67583 -2.62 24.62 2699 2699 MS2 17/18 Linfeng_091311_rIgG_3.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 182 2.33 0.00 1 2 25 2 619.29712 1237.58696 1.71 4.90 558 558 MS2 13/18 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 468 2.33 0.00 0 9 100 2 516.30457 1031.60185 3.40 31.23 2877 2877 MS2 10/16 Linfeng_20120130_CHD1_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 405 2.33 0.00 1 12 25 2 617.84106 1234.67485 -3.41 24.50 2418 2418 MS2 17/18 Linfeng_091311_rIgG_1.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 407 2.33 0.00 0 31 100 2 553.76770 1106.52812 1.98 13.15 884 884 MS2 14/16 Linfeng_20120130_CHD1_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 395 2.33 0.00 0 19 100 2 516.30511 1031.60295 4.46 33.51 2862 2862 MS2 13/16 Linfeng_20120130_CHD1_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 600 2.33 0.00 0 30 100 2 601.31458 1201.62187 3.89 31.84 3084 3084 MS2 13/20 Linfeng_20120130_CHD1_8.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 343 2.32 0.00 1 22 100 2 619.29755 1237.58782 2.40 27.07 2039 2039 MS2 10/18 Linfeng_20120130_CHD1_1.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.32 0.00 1 1 25 2 747.37006 1493.73284 -1.01 20.33 2095 2095 MS2 14/22 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.32 0.00 0 39 100 2 555.25116 1109.49504 4.66 33.11 3121 3121 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 356 2.31 0.00 0 41 25 2 583.29791 1165.58855 3.21 23.36 1798 1798 MS2 14/16 Linfeng_122411_rIgG_10.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 589 2.31 0.00 0 3 47 2 601.31415 1201.62102 3.18 32.26 3092 3092 MS2 17/20 Linfeng_20120130_CHD1_4.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.31 0.00 1 10 25 2 594.35162 1187.69597 -2.95 29.74 3126 3126 MS2 15/18 Linfeng_091311_rIgG_1.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 203 2.31 0.00 1 24 25 2 619.29858 1237.58989 4.08 16.80 1324 1324 MS2 13/18 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 462 2.31 0.00 0 29 100 2 516.30450 1031.60173 3.28 33.59 2739 2739 MS2 13/16 Linfeng_20120130_CHD1_3.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 445 2.31 0.00 0 13 100 2 553.76831 1106.52934 3.08 13.00 858 858 MS2 13/16 Linfeng_20120130_CHD1_1.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 276 2.31 0.00 1 40 100 2 594.35492 1187.70256 2.60 37.82 4603 4603 MS2 15/18 Linfeng_20120130_CHD1_5.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 345 2.31 0.00 1 4 25 2 717.89160 1434.77593 4.13 22.87 1849 1849 MS2 15/20 Linfeng_122411_rIgG_3.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 417 2.30 0.00 1 4 25 2 617.84125 1234.67522 -3.11 24.90 2704 2704 MS2 17/18 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 375 2.30 0.00 1 27 25 2 617.84430 1234.68132 1.83 22.24 1939 1939 MS2 13/18 Linfeng_122411_rIgG_6.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 475 2.30 0.00 0 15 100 2 695.84589 1390.68450 2.56 32.30 2356 2356 MS2 16/24 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 224 2.30 0.00 0 45 100 2 555.25043 1109.49358 3.34 33.28 3508 3508 MS2 13/16 Linfeng_20120130_CHD1_10.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 317 2.29 0.00 1 3 25 2 747.36902 1493.73076 -2.40 20.26 2120 2120 MS2 15/22 Linfeng_091311_rIgG_2.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 296 2.29 0.00 1 3 25 2 747.36951 1493.73174 -1.74 20.54 2107 2107 MS2 16/22 Linfeng_091311_rIgG_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 13 25 2 516.30334 1031.59941 1.03 29.77 2679 2679 MS2 15/16 Linfeng_122411_rIgG_8.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 585 2.29 0.00 0 16 100 2 497.25470 993.50212 2.12 22.37 1464 1464 MS2 13/14 Linfeng_20120130_CHD1_4.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 355 2.29 0.00 1 0 25 2 717.89081 1434.77434 3.02 23.88 1965 1965 MS2 14/20 Linfeng_122411_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 455 2.29 0.00 0 9 100 2 516.30469 1031.60210 3.63 0.93 128 128 MS2 14/16 Linfeng_20120130_CHD1_6.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 473 2.29 0.00 0 3 100 2 516.30463 1031.60198 3.51 11.62 876 876 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 465 2.28 0.00 1 8 100 2 617.84558 1234.68389 3.91 23.88 1522 1522 MS2 12/18 Linfeng_20120130_CHD1_2.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 266 2.28 0.00 0 17 25 2 631.80420 1262.60112 3.10 21.46 1577 1577 MS2 20/26 Linfeng_122411_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.28 0.00 1 32 100 2 532.81030 1064.61333 3.21 24.69 1885 1885 MS2 11/16 Linfeng_20120130_CHD1_8.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 284 2.27 0.00 1 37 100 2 594.35492 1187.70256 2.60 38.43 3866 3866 MS2 15/18 Linfeng_20120130_CHD1_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 494 2.27 0.00 1 54 100 2 617.84534 1234.68340 3.51 28.62 2361 2361 MS2 15/18 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 223 2.27 0.00 0 23 100 2 555.25037 1109.49346 3.23 35.39 3602 3602 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.27 0.00 1 7 25 2 617.84192 1234.67656 -2.02 24.90 2730 2730 MS2 17/18 Linfeng_091311_rIgG_6.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 294 2.27 0.00 1 5 25 2 747.36975 1493.73223 -1.42 20.57 2141 2141 MS2 14/22 Linfeng_091311_rIgG_6.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 412 2.26 0.00 0 7 25 2 601.31293 1201.61858 1.15 4.52 502 502 MS2 19/20 Linfeng_122411_rIgG_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 471 2.26 0.00 1 11 100 2 617.84448 1234.68169 2.13 23.23 1616 1616 MS2 12/18 Linfeng_20120130_CHD1_5.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 244 2.26 0.00 0 44 25 2 631.80029 1262.59331 -3.09 22.60 2387 2387 MS2 20/26 Linfeng_091311_rIgG_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 472 2.25 0.00 0 14 100 2 516.30469 1031.60210 3.63 1.44 254 254 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 500 2.25 0.00 1 42 100 2 617.84528 1234.68328 3.41 26.73 1978 1978 MS2 13/18 Linfeng_20120130_CHD1_1.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.25 0.00 1 1 25 2 747.36969 1493.73210 -1.50 20.27 2096 2096 MS2 14/22 Linfeng_091311_rIgG_3.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 506 2.25 0.00 0 11 100 2 545.77045 1090.53362 2.38 18.30 1178 1178 MS2 15/16 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 293 2.25 0.00 0 23 25 2 516.30109 1031.59490 -3.35 31.73 3690 3690 MS2 14/16 Linfeng_091311_rIgG_8.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 593 2.24 0.00 1 22 100 2 717.88916 1434.77104 0.73 35.62 2810 2810 MS2 12/20 Linfeng_20120130_CHD1_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 449 2.24 0.00 0 44 100 2 516.30402 1031.60076 2.33 33.89 3541 3541 MS2 12/16 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 542 2.23 0.00 1 15 100 2 617.84320 1234.67912 0.05 25.74 2012 2012 MS2 14/18 Linfeng_20120130_CHD1_8.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 380 2.23 0.00 0 16 11 2 601.31000 1201.61272 -3.73 29.45 3087 3087 MS2 16/20 Linfeng_091311_rIgG_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 2.23 0.00 0 19 100 2 516.30420 1031.60112 2.69 33.80 2576 2576 MS2 12/16 Linfeng_20120130_CHD1_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 472 2.23 0.00 1 6 100 2 617.84436 1234.68144 1.93 26.24 2229 2229 MS2 12/18 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 325 2.22 0.00 1 4 100 2 532.81006 1064.61284 2.75 23.69 1506 1506 MS2 12/16 Linfeng_20120130_CHD1_2.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 276 2.22 0.00 1 40 100 2 594.35480 1187.70232 2.40 38.36 3852 3852 MS2 13/18 Linfeng_20120130_CHD1_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.22 0.00 0 13 13 2 601.31073 1201.61418 -2.51 29.64 3313 3313 MS2 17/20 Linfeng_091311_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 478 2.22 0.00 0 9 100 2 516.30463 1031.60198 3.51 1.39 241 241 MS2 12/16 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 206 2.21 0.00 0 46 100 2 555.25085 1109.49443 4.11 36.78 3916 3916 MS2 11/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 181 2.21 0.00 0 55 100 2 555.24982 1109.49236 2.24 38.84 4445 4445 MS2 12/16 Linfeng_20120130_CHD1_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 402 2.21 0.00 0 30 25 2 601.31067 1201.61406 -2.61 29.34 3338 3338 MS2 16/20 Linfeng_091311_rIgG_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 477 2.21 0.00 0 35 100 2 516.30408 1031.60088 2.45 35.42 3608 3608 MS2 12/16 Linfeng_20120130_CHD1_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 233 2.20 0.00 0 4 25 2 631.79993 1262.59258 -3.67 22.45 2477 2477 MS2 20/26 Linfeng_091311_rIgG_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.20 0.00 0 27 100 2 555.25098 1109.49468 4.33 33.25 3149 3149 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 427 2.20 0.00 0 31 100 2 516.30353 1031.59978 1.38 35.32 3584 3584 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 307 2.20 0.00 0 37 6 2 516.30121 1031.59514 -3.11 29.16 2529 2529 MS2 15/16 Linfeng_122411_rIgG_10.raw High IRLENEIQTYR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 437 2.19 0.00 1 5 25 2 717.88727 1434.76726 -1.91 28.08 3157 3157 MS2 17/20 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 508 2.19 0.00 1 21 100 2 617.84479 1234.68230 2.62 26.28 2020 2020 MS2 14/18 Linfeng_20120130_CHD1_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 368 2.19 0.00 0 46 25 2 516.30389 1031.60051 2.09 30.47 2475 2475 MS2 14/16 Linfeng_122411_rIgG_7.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 354 2.19 0.00 0 7 6 2 497.25204 993.49681 -3.23 23.13 2522 2522 MS2 13/14 Linfeng_091311_rIgG_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 504 2.19 0.00 0 28 100 2 601.31348 1201.61968 2.06 32.19 3261 3261 MS2 15/20 Linfeng_20120130_CHD1_10.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 247 2.19 0.00 1 13 25 2 498.26141 995.51555 -4.16 22.30 2115 2115 MS2 11/12 Linfeng_091311_rIgG_1.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 399 2.18 0.00 0 6 25 2 601.31354 1201.61980 2.16 27.75 2503 2503 MS2 19/20 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 423 2.18 0.00 0 15 100 2 516.30365 1031.60002 1.62 33.79 2545 2545 MS2 14/16 Linfeng_20120130_CHD1_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 304 2.18 0.00 0 3 12 2 516.30157 1031.59587 -2.40 31.44 3625 3625 MS2 15/16 Linfeng_091311_rIgG_3.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 327 2.18 0.00 0 12 25 2 497.25186 993.49645 -3.60 23.36 2556 2556 MS2 13/14 Linfeng_091311_rIgG_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 397 2.17 0.00 1 27 25 2 617.84143 1234.67558 -2.82 24.63 2693 2693 MS2 17/18 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.17 0.00 1 14 100 2 532.80988 1064.61247 2.41 23.71 1639 1639 MS2 12/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.16 0.00 0 29 100 2 555.24963 1109.49199 1.91 35.42 3113 3113 MS2 13/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.16 0.00 0 6 19 2 555.24683 1109.48638 -3.15 33.03 3764 3764 MS2 13/16 Linfeng_091311_rIgG_5.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 449 2.16 0.00 0 17 100 2 516.30414 1031.60100 2.57 34.93 3775 3775 MS2 12/16 Linfeng_20120130_CHD1_8.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.16 0.00 1 33 25 2 594.35162 1187.69597 -2.95 29.60 3418 3418 MS2 14/18 Linfeng_091311_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 297 2.16 0.00 0 4 6 2 516.30127 1031.59526 -2.99 31.80 3638 3638 MS2 15/16 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 2.16 0.00 1 37 100 2 532.81018 1064.61308 2.98 24.87 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_8.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 225 2.16 0.00 0 19 25 2 631.79944 1262.59160 -4.44 21.31 1981 1981 MS2 20/26 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 173 2.15 0.00 0 27 100 2 555.24976 1109.49224 2.13 33.42 3433 3433 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 485 2.15 0.00 1 71 100 2 617.84436 1234.68144 1.93 22.88 1500 1500 MS2 14/18 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 90 2.14 0.00 0 24 25 2 555.24707 1109.48686 -2.71 33.08 3807 3807 MS2 13/16 Linfeng_091311_rIgG_7.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 419 2.14 0.00 1 11 25 2 617.84131 1234.67534 -3.01 24.92 2770 2770 MS2 15/18 Linfeng_091311_rIgG_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 178 2.14 0.00 0 46 25 2 691.33014 1381.65300 3.46 23.02 1894 1894 MS2 14/22 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 393 2.13 0.00 0 5 1 2 516.30090 1031.59453 -3.70 31.69 3385 3385 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 286 2.13 0.00 0 20 25 2 516.30109 1031.59490 -3.35 31.59 3575 3575 MS2 14/16 Linfeng_091311_rIgG_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 83 2.13 0.00 0 40 25 2 555.24725 1109.48723 -2.38 32.91 3811 3811 MS2 14/16 Linfeng_091311_rIgG_4.raw High QSLEASLAETEGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 458 2.13 0.00 0 32 100 2 695.84485 1390.68242 1.07 32.90 2443 2443 MS2 13/24 Linfeng_20120130_CHD1_6.raw High QSVEADINGLRR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 522 2.13 0.00 1 2 100 2 679.36426 1357.72124 2.15 30.60 2157 2157 MS2 11/22 Linfeng_20120130_CHD1_7.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.12 0.00 0 31 25 2 601.31024 1201.61321 -3.32 29.61 3361 3361 MS2 18/20 Linfeng_091311_rIgG_6.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 324 2.12 0.00 1 12 25 2 594.35425 1187.70122 1.47 27.88 2520 2520 MS2 15/18 Linfeng_122411_rIgG_2.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 263 2.11 0.00 0 38 25 2 631.80457 1262.60185 3.68 21.39 1724 1724 MS2 16/26 Linfeng_122411_rIgG_2.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 495 2.11 0.00 1 5 100 2 617.84467 1234.68205 2.42 24.24 1676 1676 MS2 14/18 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 181 2.11 0.00 0 34 100 2 555.25024 1109.49321 3.01 35.69 3276 3276 MS2 13/16 Linfeng_20120130_CHD1_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.11 0.00 0 4 100 2 516.30511 1031.60295 4.46 0.68 66 66 MS2 14/16 Linfeng_20120130_CHD1_10.raw High KDAEAWFNEK Unambiguous 2 1 IPI00009865.4 CID 1.0000 0.0000 1 1 195 2.11 0.00 1 14 25 2 619.29779 1237.58830 2.80 18.89 1487 1487 MS2 10/18 Linfeng_122411_rIgG_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 386 2.11 0.00 0 12 25 2 601.31055 1201.61382 -2.82 29.67 3352 3352 MS2 17/20 Linfeng_091311_rIgG_9.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 183 2.11 0.00 0 64 25 2 691.33063 1381.65398 4.17 24.08 2017 2017 MS2 16/22 Linfeng_122411_rIgG_2.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.11 0.00 1 27 25 2 594.35187 1187.69646 -2.54 29.87 3396 3396 MS2 15/18 Linfeng_091311_rIgG_6.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 2.10 0.00 0 21 25 2 497.25208 993.49687 -3.17 23.39 2522 2522 MS2 13/14 Linfeng_091311_rIgG_6.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 529 2.10 0.00 1 45 100 2 617.84290 1234.67851 -0.44 25.87 2044 2044 MS2 14/18 Linfeng_20120130_CHD1_8.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 332 2.10 0.00 0 9 25 2 497.25217 993.49706 -2.98 23.41 2500 2500 MS2 13/14 Linfeng_091311_rIgG_7.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 281 2.08 0.00 1 48 100 2 594.35480 1187.70232 2.40 38.22 3821 3821 MS2 14/18 Linfeng_20120130_CHD1_2.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 297 2.08 0.00 0 9 25 2 516.30157 1031.59587 -2.40 31.74 3625 3625 MS2 14/16 Linfeng_091311_rIgG_9.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 337 2.08 0.00 0 7 9 2 497.25186 993.49645 -3.60 22.68 2166 2166 MS2 13/14 Linfeng_091311_rIgG_1.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 344 2.08 0.00 0 14 25 2 497.25223 993.49718 -2.86 23.07 2481 2481 MS2 13/14 Linfeng_091311_rIgG_3.raw High SQYEQLAEQNRK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 294 2.08 0.00 1 3 25 2 747.36975 1493.73223 -1.42 20.45 2077 2077 MS2 15/22 Linfeng_091311_rIgG_5.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 378 2.08 0.00 0 9 25 2 601.31006 1201.61284 -3.63 29.61 3344 3344 MS2 17/20 Linfeng_091311_rIgG_7.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 7 14 2 497.25217 993.49706 -2.98 23.17 2489 2489 MS2 13/14 Linfeng_091311_rIgG_4.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 586 2.07 0.00 0 8 100 2 601.31427 1201.62126 3.38 32.24 2579 2579 MS2 15/20 Linfeng_20120130_CHD1_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High SLLEGEGSSGGGGR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 264 2.07 0.00 0 38 25 2 631.80432 1262.60137 3.29 21.33 1790 1790 MS2 16/26 Linfeng_122411_rIgG_4.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 2.06 0.00 1 17 25 2 594.35242 1187.69756 -1.61 29.63 3377 3377 MS2 14/18 Linfeng_091311_rIgG_4.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 476 2.06 0.00 1 8 100 2 617.84515 1234.68303 3.22 24.62 1650 1650 MS2 14/18 Linfeng_20120130_CHD1_7.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 311 2.06 0.00 0 3 13 2 497.25381 993.50035 0.33 4.87 552 552 MS2 13/14 Linfeng_122411_rIgG_6.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 552 2.05 0.00 0 6 100 2 497.25470 993.50212 2.12 19.52 1266 1266 MS2 12/14 Linfeng_20120130_CHD1_4.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 500 2.05 0.00 1 57 100 2 617.84534 1234.68340 3.51 27.43 2099 2099 MS2 11/18 Linfeng_20120130_CHD1_1.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 259 2.05 0.00 1 4 25 2 498.26205 995.51683 -2.87 22.86 2485 2485 MS2 11/12 Linfeng_091311_rIgG_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 88 2.04 0.00 0 14 25 2 555.24677 1109.48625 -3.26 33.14 3878 3878 MS2 13/16 Linfeng_091311_rIgG_8.raw High ALEESNYELEGK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 177 2.04 0.00 0 23 25 2 691.32983 1381.65239 3.02 20.32 1618 1618 MS2 16/22 Linfeng_122411_rIgG_2.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 465 2.03 0.00 0 29 100 2 516.30408 1031.60088 2.45 35.24 3566 3566 MS2 12/16 Linfeng_20120130_CHD1_1.raw High YENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 394 2.03 0.00 0 8 14 2 497.25113 993.49498 -5.07 23.33 2464 2464 MS2 13/14 Linfeng_091311_rIgG_5.raw High LKYENEVALR Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 488 2.02 0.00 1 3 100 2 617.84467 1234.68205 2.42 25.53 1766 1766 MS2 14/18 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 333 2.02 0.00 1 15 25 2 594.35211 1187.69695 -2.13 29.60 3380 3380 MS2 15/18 Linfeng_091311_rIgG_3.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 308 2.02 0.00 0 4 1 2 516.30194 1031.59661 -1.69 29.83 3010 3010 MS2 15/16 Linfeng_122411_rIgG_5.raw High RVLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 283 2.01 0.00 1 44 100 2 594.35474 1187.70220 2.29 38.32 3842 3842 MS2 13/18 Linfeng_20120130_CHD1_2.raw High LASYLDK Unambiguous 22 5 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00019359.4 CID 1.0000 0.0000 1 1 244 2.01 0.00 0 28 100 2 405.22485 809.44243 2.54 21.37 1394 1394 MS2 10/12 Linfeng_20120130_CHD1_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 298 2.01 0.00 0 5 12 2 516.30139 1031.59551 -2.76 31.50 3624 3624 MS2 14/16 Linfeng_091311_rIgG_4.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High IKEWYEK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 343 2.01 0.00 1 7 25 2 498.26242 995.51756 -2.14 22.99 2465 2465 MS2 11/12 Linfeng_091311_rIgG_4.raw High VLDELTLTK Unambiguous 1 1 IPI00009865.4 CID 1.0000 0.0000 1 1 329 2.01 0.00 0 4 3 2 516.30157 1031.59587 -2.40 31.53 3676 3676 MS2 15/16 Linfeng_091311_rIgG_2.raw High QSVEADINGLR Unambiguous 5 1 IPI00009865.4 CID 1.0000 0.0000 1 1 396 2.00 0.00 0 11 25 2 601.31085 1201.61443 -2.31 29.31 3341 3341 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00414696.1 Isoform A2 of Heterogeneous nuclear ribonucleoproteins A2/B1 60.41 3 19 20 67 128.91 56.89 15 40 74.52 46.33 13 22 17.13 12.02 3 5 341 36.0 8.65 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 24 7.02 0.00 0 1 25 3 832.35358 2495.04618 2.61 31.86 3214 3214 MS2 42/108 Linfeng_122411_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 19 6.39 0.00 0 1 20 3 832.34918 2495.03299 -2.67 32.72 3771 3771 MS2 41/108 Linfeng_091311_rIgG_6.raw High GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 19 5.34 0.00 0 1 25 3 832.34863 2495.03135 -3.33 32.80 3771 3771 MS2 41/108 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 546 5.17 0.00 0 13 100 2 899.96429 1798.92131 -0.52 55.10 5817 5817 MS2 23/30 Linfeng_20120130_CHD1_6.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 380 4.70 0.00 1 4 13 3 643.00916 1927.01291 -2.23 39.10 4574 4574 MS2 32/64 Linfeng_091311_rIgG_7.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 375 4.48 0.00 1 4 25 3 643.01257 1927.02317 3.09 38.25 4017 4017 MS2 33/64 Linfeng_122411_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 291 4.46 0.00 1 11 25 3 740.69446 2220.06882 -0.87 42.37 4994 4994 MS2 34/68 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 359 4.43 0.00 0 13 25 2 899.96375 1798.92021 -1.13 43.22 5101 5101 MS2 25/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 367 4.32 0.00 0 11 25 2 899.96716 1798.92705 2.67 42.09 3931 3931 MS2 26/30 Linfeng_122411_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 23 4.31 0.00 0 6 25 3 730.64197 2189.91135 2.69 25.73 2405 2405 MS2 32/96 Linfeng_122411_rIgG_6.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 386 4.29 0.00 1 6 10 3 643.00928 1927.01328 -2.04 39.06 4581 4581 MS2 32/64 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 360 4.26 0.00 0 8 25 2 899.96747 1798.92766 3.01 41.98 4482 4482 MS2 26/30 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 346 4.24 0.00 0 10 25 2 899.96283 1798.91838 -2.15 43.28 5100 5100 MS2 25/30 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 12 4.22 0.00 0 7 25 3 730.63623 2189.89414 -5.17 26.92 3001 3001 MS2 37/96 Linfeng_091311_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 291 4.14 0.00 1 19 25 3 740.69446 2220.06882 -0.87 42.32 4979 4979 MS2 32/68 Linfeng_091311_rIgG_7.raw High NMGGPYGGGNYGPGGSGGSGGYGGR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 12 4.11 0.00 0 10 25 3 730.63708 2189.89670 -4.00 27.03 2991 2991 MS2 37/96 Linfeng_091311_rIgG_7.raw High KLFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 361 3.99 0.00 1 15 25 2 964.01019 1927.01311 -2.13 39.14 4591 4591 MS2 24/32 Linfeng_091311_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 311 3.94 0.00 1 4 25 3 740.69739 2220.07761 3.09 41.49 4420 4420 MS2 30/68 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 354 3.89 0.00 0 65 25 2 899.96240 1798.91753 -2.62 43.34 5108 5108 MS2 24/30 Linfeng_091311_rIgG_9.raw High RGFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 218 3.85 0.00 1 8 25 3 617.95825 1851.86020 -3.20 33.92 3926 3926 MS2 31/60 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 361 3.69 0.00 0 27 25 2 899.96246 1798.91765 -2.55 43.21 5253 5253 MS2 23/30 Linfeng_091311_rIgG_10.raw High GFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 254 3.68 0.00 0 19 100 2 848.39026 1695.77324 4.85 47.14 4710 4710 MS2 21/28 Linfeng_20120130_CHD1_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 402 3.64 0.00 0 12 25 3 600.31384 1798.92698 2.63 42.02 4486 4486 MS2 32/60 Linfeng_122411_rIgG_6.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 320 3.64 0.00 1 19 25 3 740.69659 2220.07523 2.02 41.48 3854 3854 MS2 26/68 Linfeng_122411_rIgG_7.raw High ALSRQEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 413 3.56 0.00 1 9 13 3 550.27417 1648.80796 0.45 3.85 402 402 MS2 27/52 Linfeng_122411_rIgG_6.raw High RGFGFVTFDDHDPVDK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 218 3.27 0.00 1 22 25 3 617.95819 1851.86002 -3.30 34.03 3928 3928 MS2 30/60 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 391 3.26 0.00 0 17 25 3 600.31122 1798.91910 -1.75 43.34 5108 5108 MS2 34/60 Linfeng_091311_rIgG_7.raw High GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 402 3.20 0.00 1 4 25 3 759.72461 2277.15927 1.82 39.33 4151 4151 MS2 30/76 Linfeng_122411_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 529 3.18 0.00 0 36 25 2 594.82892 1188.65056 2.91 30.36 2460 2460 MS2 15/18 Linfeng_122411_rIgG_7.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 123 3.17 0.00 0 22 25 3 459.87949 1377.62390 -4.08 24.66 2261 2261 MS2 30/56 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 396 3.07 0.00 0 13 25 3 600.31079 1798.91782 -2.46 43.28 5108 5108 MS2 32/60 Linfeng_091311_rIgG_6.raw High GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 403 3.07 0.00 1 8 25 4 570.04565 2277.16079 2.49 39.13 4126 4126 MS2 33/114 Linfeng_122411_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 602 3.05 0.00 0 26 24 2 594.82410 1188.64092 -5.20 35.33 4106 4106 MS2 17/18 Linfeng_091311_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 559 2.97 0.00 0 0 25 2 594.82379 1188.64031 -5.72 35.34 4097 4097 MS2 17/18 Linfeng_091311_rIgG_7.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 75 2.95 0.00 0 49 25 2 507.22598 1013.44469 1.08 25.04 2313 2313 MS2 15/18 Linfeng_122411_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 640 2.94 0.00 0 34 100 2 594.82935 1188.65141 3.63 41.43 3750 3750 MS2 17/18 Linfeng_20120130_CHD1_7.raw High DYFEEYGKIDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 276 2.91 0.00 1 43 25 3 740.69336 2220.06552 -2.35 42.36 5144 5144 MS2 21/68 Linfeng_091311_rIgG_10.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 535 2.91 0.00 0 26 25 2 594.82501 1188.64275 -3.66 35.39 4250 4250 MS2 17/18 Linfeng_091311_rIgG_10.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 76 2.89 0.00 0 21 25 2 507.22598 1013.44469 1.08 26.09 2453 2453 MS2 15/18 Linfeng_122411_rIgG_6.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 371 2.86 0.00 1 4 25 3 627.32495 1879.96030 -3.12 25.54 2818 2818 MS2 30/60 Linfeng_091311_rIgG_6.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 604 2.85 0.00 0 34 100 2 594.82898 1188.65068 3.01 41.21 3564 3564 MS2 16/18 Linfeng_20120130_CHD1_6.raw High SGRGGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 147 2.81 0.00 1 36 25 3 438.53784 1313.59897 0.58 4.73 531 531 MS2 22/48 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 62 2.79 0.00 0 48 25 2 507.22263 1013.43797 -5.54 26.96 3006 3006 MS2 15/18 Linfeng_091311_rIgG_6.raw Medium GFGFVTFDDHDPVDKIVLQK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 406 2.76 0.00 1 5 25 4 570.04504 2277.15835 1.42 40.35 4278 4278 MS2 30/114 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 63 2.76 0.00 0 14 13 2 507.22333 1013.43938 -4.16 27.06 2996 2996 MS2 16/18 Linfeng_091311_rIgG_7.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 571 2.69 0.00 0 18 22 2 594.82391 1188.64055 -5.51 35.50 4188 4188 MS2 16/18 Linfeng_091311_rIgG_8.raw High LFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 1 373 2.69 0.00 1 2 25 3 627.32483 1879.95993 -3.32 24.91 2706 2706 MS2 27/60 Linfeng_091311_rIgG_7.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 58 2.66 0.00 0 15 25 2 507.22372 1013.44017 -3.37 27.07 3062 3062 MS2 15/18 Linfeng_091311_rIgG_8.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 571 2.62 0.00 0 2 21 2 594.82764 1188.64800 0.75 34.32 3526 3526 MS2 17/18 Linfeng_122411_rIgG_6.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 58 2.59 0.00 0 12 25 2 507.22354 1013.43981 -3.74 27.06 2998 2998 MS2 15/18 Linfeng_091311_rIgG_9.raw High LFIGGLSFETTEESLR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 398 2.57 0.00 0 36 25 3 600.31049 1798.91690 -2.97 43.31 5104 5104 MS2 26/60 Linfeng_091311_rIgG_9.raw High QEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 148 2.53 0.00 0 13 25 2 611.27881 1221.55034 -2.08 17.21 1640 1640 MS2 17/18 Linfeng_091311_rIgG_7.raw High IDTIEIITDR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 563 2.48 0.00 0 34 100 2 594.82861 1188.64995 2.40 41.65 4112 4112 MS2 13/18 Linfeng_20120130_CHD1_9.raw High GGNFGFGDSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 75 2.34 0.00 0 47 25 2 507.22574 1013.44420 0.60 4.89 595 595 MS2 15/18 Linfeng_122411_rIgG_5.raw High GGSDGYGSGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 37 2.27 0.00 0 55 25 2 456.69342 912.37956 -1.18 3.22 329 329 MS2 14/18 Linfeng_091311_rIgG_8.raw High GGSDGYGSGR Unambiguous 2 1 IPI00414696.1 CID 1.0000 0.0000 1 1 16 2.26 0.00 0 26 25 2 456.69299 912.37871 -2.12 2.80 266 266 MS2 13/18 Linfeng_091311_rIgG_7.raw High EESGKPGAHVTVK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 365 2.26 0.00 0 14 25 2 669.85431 1338.70134 0.05 12.02 972 972 MS2 14/24 Linfeng_091311_rIgG_7.raw High QEMQEVQSSR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 137 2.17 0.00 0 6 25 2 611.27930 1221.55132 -1.28 17.28 1683 1683 MS2 16/18 Linfeng_091311_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.17 0.00 0 48 25 2 497.24872 993.49016 4.53 22.37 1957 1957 MS2 13/14 Linfeng_122411_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 283 2.16 0.00 0 19 25 2 497.24542 993.48357 -2.10 25.17 2767 2767 MS2 13/14 Linfeng_091311_rIgG_6.raw High LTDcVVMR Unambiguous 3 1 IPI00414696.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 273 2.13 0.00 0 11 25 2 497.24512 993.48296 -2.72 25.14 2739 2739 MS2 13/14 Linfeng_091311_rIgG_7.raw High EESGKPGAHVTVK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 374 2.13 0.00 0 3 25 2 669.85425 1338.70122 -0.04 13.74 1198 1198 MS2 18/24 Linfeng_091311_rIgG_6.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 108 2.12 0.00 0 12 25 2 689.31512 1377.62297 -4.75 26.53 2989 2989 MS2 15/28 Linfeng_091311_rIgG_8.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 128 2.10 0.00 0 8 23 2 689.31696 1377.62663 -2.10 24.59 2251 2251 MS2 18/28 Linfeng_122411_rIgG_6.raw High DYFEEYGK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 47 2.10 0.00 0 25 25 2 525.72546 1050.44365 2.06 28.79 2813 2813 MS2 12/14 Linfeng_122411_rIgG_6.raw High GGGGNFGPGPGSNFR Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 112 2.06 0.00 0 11 25 2 689.31616 1377.62505 -3.25 26.42 2936 2936 MS2 16/28 Linfeng_091311_rIgG_6.raw High NYYEQWGK Unambiguous 3 1 IPI00414696.1 CID 1.0000 0.0000 1 1 60 2.02 0.00 0 7 17 2 544.24432 1087.48137 -2.74 27.76 3112 3112 MS2 12/14 Linfeng_091311_rIgG_6.raw IPI00011268.2 "cDNA FLJ77422, highly similar to Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (Fragment)" 59.93 6 15 15 41 47.24 37.79 11 19 33.13 48.21 11 11 32.49 17.26 4 11 307 32.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SNIDALLSRLEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 327 3.92 0.00 1 42 25 3 667.03363 1999.08634 2.20 46.36 5038 5038 MS2 29/68 Linfeng_122411_rIgG_6.raw High SSELQAIKTELTQIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 225 3.90 0.00 1 37 25 3 563.65338 1688.94559 1.56 36.22 3763 3763 MS2 32/56 Linfeng_122411_rIgG_6.raw High KGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEAR Unambiguous 1 1 IPI00011268.2 CID 1.0000 0.0000 1 1 32 3.85 0.00 1 0 25 4 1067.48218 4266.90688 2.13 20.31 1700 1700 MS2 46/306 Linfeng_122411_rIgG_6.raw High VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 280 3.63 0.00 0 18 25 4 563.30383 2250.19350 1.02 28.18 2733 2733 MS2 43/120 Linfeng_122411_rIgG_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 334 3.60 0.00 0 30 100 2 667.31476 1333.62224 3.80 30.82 2206 2206 MS2 16/20 Linfeng_20120130_CHD1_6.raw High VLAGQTLDINmAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 M11(Oxidation) CID 1.0000 0.0000 1 1 484 3.44 0.00 2 2 100 3 756.06848 2266.19089 2.10 29.98 2121 2121 MS2 25/80 Linfeng_20120130_CHD1_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 323 3.44 0.00 0 23 100 2 667.31433 1333.62139 3.16 31.03 2229 2229 MS2 15/20 Linfeng_20120130_CHD1_6.raw High AASAIYSGYIFDYDYYR Unambiguous 2 1 IPI00011268.2 CID 1.0000 0.0000 1 1 74 3.30 0.00 0 13 25 2 1019.46295 2037.91863 -2.10 42.38 4987 4987 MS2 21/32 Linfeng_091311_rIgG_7.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 328 3.16 0.00 0 22 100 2 667.31439 1333.62151 3.25 31.07 2232 2232 MS2 15/20 Linfeng_20120130_CHD1_6.raw High VLAGQTLDINmAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 M11(Oxidation) CID 1.0000 0.0000 1 1 490 3.05 0.00 2 8 100 4 567.30304 2266.19033 1.85 29.89 2113 2113 MS2 36/120 Linfeng_20120130_CHD1_6.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 360 2.95 0.00 1 48 25 2 577.30963 1153.61199 1.74 25.54 2380 2380 MS2 16/18 Linfeng_122411_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 188 2.90 0.00 0 30 100 2 644.88745 1288.76763 4.05 45.08 4276 4276 MS2 20/22 Linfeng_20120130_CHD1_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 719 2.82 0.00 0 16 25 2 494.77353 988.53978 -2.48 32.11 3691 3691 MS2 15/16 Linfeng_091311_rIgG_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 767 2.81 0.00 0 3 100 2 494.77570 988.54411 1.91 35.25 2786 2786 MS2 14/16 Linfeng_20120130_CHD1_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 182 2.80 0.00 0 7 25 2 667.31360 1333.61992 2.06 28.48 2772 2772 MS2 15/20 Linfeng_122411_rIgG_6.raw Medium VLAGQTLDINMAGEPKPDRPK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 292 2.80 0.00 0 7 25 4 563.30170 2250.18496 -2.78 29.37 3313 3313 MS2 44/120 Linfeng_091311_rIgG_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 611 2.80 0.00 0 12 100 2 494.77493 988.54259 0.36 35.51 2790 2790 MS2 13/16 Linfeng_20120130_CHD1_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 694 2.79 0.00 0 32 25 2 494.77548 988.54369 1.47 30.76 3072 3072 MS2 15/16 Linfeng_122411_rIgG_6.raw High SSELQAIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 589 2.70 0.00 0 16 25 2 438.24429 875.48131 -2.29 21.88 2316 2316 MS2 13/14 Linfeng_091311_rIgG_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 646 2.67 0.00 0 11 25 2 494.77335 988.53942 -2.85 32.18 3690 3690 MS2 15/16 Linfeng_091311_rIgG_7.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 329 2.66 0.00 1 38 25 2 577.30676 1153.60625 -3.24 27.25 3044 3044 MS2 14/18 Linfeng_091311_rIgG_6.raw High SSELQAIK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 590 2.65 0.00 0 24 25 2 438.24387 875.48046 -3.26 21.90 2291 2291 MS2 13/14 Linfeng_091311_rIgG_7.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 169 2.60 0.00 0 15 25 2 667.31091 1333.61455 -1.97 29.70 3373 3373 MS2 15/20 Linfeng_091311_rIgG_6.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 588 2.59 0.00 0 6 100 2 494.77509 988.54289 0.67 35.39 2767 2767 MS2 13/16 Linfeng_20120130_CHD1_7.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 151 2.51 0.00 0 12 25 2 644.88568 1288.76409 1.30 35.24 3641 3641 MS2 18/22 Linfeng_122411_rIgG_6.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 337 2.49 0.00 0 14 25 2 513.25903 1025.51079 -4.12 31.31 3586 3586 MS2 14/16 Linfeng_091311_rIgG_6.raw High GYAFVQYSNER Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 148 2.47 0.00 0 10 25 2 667.31055 1333.61382 -2.52 29.70 3357 3357 MS2 15/20 Linfeng_091311_rIgG_7.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 338 2.40 0.00 0 21 25 2 513.25916 1025.51103 -3.88 31.36 3581 3581 MS2 15/16 Linfeng_091311_rIgG_7.raw High SNIDALLSR Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 735 2.39 0.00 0 12 100 2 494.77542 988.54357 1.35 35.45 2778 2778 MS2 13/16 Linfeng_20120130_CHD1_7.raw High KSDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 334 2.37 0.00 1 15 25 2 577.30688 1153.60649 -3.02 27.25 3022 3022 MS2 15/18 Linfeng_091311_rIgG_7.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 366 2.37 0.00 0 6 9 2 515.28241 1029.55754 -0.01 3.64 371 371 MS2 15/16 Linfeng_122411_rIgG_6.raw High SDVETIFSK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 320 2.36 0.00 0 6 25 2 513.26172 1025.51616 1.12 29.86 2954 2954 MS2 15/16 Linfeng_122411_rIgG_6.raw High LQASNVTNK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 1 527 2.36 0.00 0 12 25 2 487.76642 974.52556 -1.04 16.00 1505 1505 MS2 15/16 Linfeng_091311_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 189 2.31 0.00 0 28 100 2 644.88684 1288.76641 3.10 45.13 4537 4537 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 341 2.22 0.00 0 8 25 2 515.28113 1029.55498 -2.50 19.86 2012 2012 MS2 15/16 Linfeng_091311_rIgG_7.raw High STAVTTSSAK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 271 2.21 0.00 0 16 25 2 476.75067 952.49407 -0.56 5.36 460 460 MS2 13/18 Linfeng_091311_rIgG_6.raw High LEQIAAEQK Unambiguous 4 1 IPI00011268.2 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 4 25 2 515.28125 1029.55522 -2.26 19.89 2045 2045 MS2 15/16 Linfeng_091311_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 180 2.16 0.00 0 24 25 2 644.88348 1288.75969 -2.11 36.32 4234 4234 MS2 17/22 Linfeng_091311_rIgG_6.raw High VFIGNLNTALVK Unambiguous 6 1 IPI00011268.2 CID 1.0000 0.0000 1 2 178 2.14 0.00 0 5 22 2 644.88306 1288.75884 -2.77 36.36 4227 4227 MS2 18/22 Linfeng_091311_rIgG_7.raw High AAVLGENGR Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 291 2.05 0.00 0 9 9 2 443.74124 886.47521 1.18 3.38 332 332 MS2 15/16 Linfeng_122411_rIgG_6.raw High STAVTTSSAK Unambiguous 5 1 IPI00011268.2 CID 1.0000 0.0000 1 1 228 2.03 0.00 0 5 25 2 476.74985 952.49242 -2.29 2.63 241 241 MS2 14/18 Linfeng_091311_rIgG_7.raw IPI00453473.6 Histone H4 57.28 1 13 13 229 123.63 51.46 6 48 219.10 57.28 13 79 307.45 53.40 8 102 103 11.4 11.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 377 4.82 0.00 1 2 24 2 719.90417 1438.80107 2.50 48.31 6678 6678 MS2 22/24 Linfeng_20120130_CHD1_10.raw High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 4.54 0.00 1 21 25 3 702.37030 2105.09635 -3.00 44.04 4457 4457 MS2 32/68 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 327 4.45 0.00 1 5 15 3 480.27133 1438.79944 1.36 35.38 3346 3346 MS2 31/48 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 366 4.39 0.00 1 1 8 3 480.26913 1438.79285 -3.22 36.34 4374 4374 MS2 31/48 Linfeng_091311_rIgG_10.raw High KTVTAMDVVYALKR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 236 4.38 0.00 2 7 25 3 532.30499 1594.90042 1.14 33.19 3064 3064 MS2 32/52 Linfeng_122411_rIgG_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 405 4.32 0.00 1 1 83 3 480.27170 1438.80054 2.13 48.27 6666 6666 MS2 29/48 Linfeng_20120130_CHD1_10.raw High KTVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M6(Oxidation) CID 1.0000 0.0000 1 1 386 4.03 0.00 1 12 100 2 727.90350 1454.79973 5.04 40.01 4853 4853 MS2 21/24 Linfeng_20120130_CHD1_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 329 4.00 0.00 1 38 25 3 480.27170 1438.80054 2.13 35.47 3257 3257 MS2 29/48 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 507 3.91 0.00 0 10 100 2 590.81567 1180.62407 2.71 34.31 3731 3731 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 550 3.91 0.00 0 5 7 2 590.81641 1180.62554 3.95 32.21 3265 3265 MS2 17/18 Linfeng_20120130_CHD1_10.raw High KTVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M6(Oxidation) CID 1.0000 0.0000 1 1 463 3.90 0.00 1 9 100 3 485.60461 1454.79929 4.74 39.21 4720 4720 MS2 31/48 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 552 3.82 0.00 0 6 8 2 590.81659 1180.62590 4.26 32.27 3279 3279 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 503 3.77 0.00 0 6 2 2 590.81519 1180.62309 1.88 31.64 3137 3137 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 532 3.76 0.00 0 6 4 2 590.81586 1180.62444 3.02 31.16 3033 3033 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 521 3.72 0.00 0 14 100 2 590.81512 1180.62297 1.78 34.64 3804 3804 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 559 3.71 0.00 0 9 100 2 590.81653 1180.62578 4.16 31.80 2849 2849 MS2 17/18 Linfeng_20120130_CHD1_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 297 3.67 0.00 1 3 87 2 663.38281 1325.75835 3.55 25.71 2138 2138 MS2 18/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 542 3.65 0.00 0 7 100 2 590.81604 1180.62480 3.33 32.10 2462 2462 MS2 17/18 Linfeng_20120130_CHD1_3.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 3.60 0.00 0 3 12 3 437.57272 1310.70362 0.84 39.57 3880 3880 MS2 32/44 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 537 3.60 0.00 0 6 3 2 590.81586 1180.62444 3.02 30.98 2995 2995 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 472 3.59 0.00 0 33 100 2 590.81677 1180.62627 4.57 31.65 2387 2387 MS2 17/18 Linfeng_20120130_CHD1_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 534 3.59 0.00 0 17 100 2 590.81604 1180.62480 3.33 29.61 2757 2757 MS2 16/18 Linfeng_20120130_CHD1_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 3.56 0.00 0 3 15 3 437.57117 1310.69895 -2.72 40.48 4905 4905 MS2 28/44 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 311 3.55 0.00 1 3 20 2 663.38318 1325.75908 4.10 23.69 1900 1900 MS2 17/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 543 3.53 0.00 0 5 7 2 590.81659 1180.62590 4.26 30.80 2963 2963 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 511 3.52 0.00 0 17 100 2 590.81506 1180.62285 1.68 34.49 3770 3770 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 556 3.45 0.00 0 5 12 2 590.81653 1180.62578 4.16 32.36 3300 3300 MS2 17/18 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 276 3.44 0.00 1 2 100 2 663.38354 1325.75981 4.66 24.70 2015 2015 MS2 18/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 504 3.44 0.00 0 6 2 2 590.81506 1180.62285 1.68 31.88 3193 3193 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 559 3.43 0.00 0 8 100 2 590.81610 1180.62493 3.43 29.76 2779 2779 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 568 3.43 0.00 0 20 100 2 590.81665 1180.62602 4.36 31.44 2488 2488 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 555 3.41 0.00 0 5 100 2 590.81628 1180.62529 3.74 32.06 2548 2548 MS2 17/18 Linfeng_20120130_CHD1_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 551 3.40 0.00 0 5 17 2 590.81665 1180.62602 4.36 32.43 3317 3317 MS2 17/18 Linfeng_20120130_CHD1_10.raw High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 387 3.40 0.00 1 46 25 3 702.37421 2105.10807 2.57 44.40 4543 4543 MS2 29/68 Linfeng_122411_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 532 3.36 0.00 0 13 100 2 590.81598 1180.62468 3.23 31.91 2428 2428 MS2 17/18 Linfeng_20120130_CHD1_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 547 3.35 0.00 0 30 100 2 590.81659 1180.62590 4.26 31.25 2455 2455 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 514 3.35 0.00 0 20 100 2 590.81531 1180.62334 2.09 32.01 2299 2299 MS2 16/18 Linfeng_20120130_CHD1_7.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 292 3.34 0.00 1 34 25 2 719.90363 1438.79997 1.73 35.46 3356 3356 MS2 20/24 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 351 3.34 0.00 0 25 25 2 590.81232 1180.61736 -2.98 30.01 3162 3162 MS2 17/18 Linfeng_091311_rIgG_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 295 3.34 0.00 1 9 100 2 663.38306 1325.75884 3.92 22.67 1773 1773 MS2 15/22 Linfeng_20120130_CHD1_10.raw High GVLKVFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 47 3.33 0.00 1 16 25 3 462.95477 1386.84977 2.12 44.98 4575 4575 MS2 23/44 Linfeng_122411_rIgG_10.raw High VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 385 3.33 0.00 1 31 25 3 702.37445 2105.10880 2.92 44.40 4383 4383 MS2 30/68 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 554 3.32 0.00 0 5 5 2 590.81635 1180.62541 3.85 32.14 3249 3249 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 528 3.31 0.00 0 18 100 2 590.81580 1180.62432 2.92 29.68 2765 2765 MS2 16/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 310 3.29 0.00 0 44 23 2 590.81354 1180.61980 -0.91 0.06 9 9 MS2 17/18 Linfeng_122411_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 527 3.29 0.00 0 28 100 2 590.81580 1180.62432 2.92 31.32 2467 2467 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 532 3.29 0.00 0 5 3 2 590.81500 1180.62273 1.57 31.97 3214 3214 MS2 17/18 Linfeng_20120130_CHD1_10.raw High KTVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M6(Oxidation) CID 1.0000 0.0000 1 1 467 3.24 0.00 1 6 100 3 485.60443 1454.79874 4.36 40.22 4891 4891 MS2 27/48 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 459 3.23 0.00 0 17 100 2 590.81689 1180.62651 4.78 32.43 2519 2519 MS2 16/18 Linfeng_20120130_CHD1_3.raw High ISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 226 3.23 0.00 1 11 25 2 789.44995 1577.89263 1.79 32.62 2992 2992 MS2 19/26 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 287 3.22 0.00 1 2 100 2 663.38361 1325.75994 4.75 26.72 2298 2298 MS2 16/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 555 3.21 0.00 0 7 27 2 590.81653 1180.62578 4.16 32.52 3336 3336 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 389 3.21 0.00 0 21 25 2 590.81421 1180.62114 0.23 27.45 2680 2680 MS2 17/18 Linfeng_122411_rIgG_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 563 3.18 0.00 0 35 100 2 590.81653 1180.62578 4.16 31.18 2444 2444 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 3.16 0.00 0 13 4 2 590.81519 1180.62309 1.88 3.11 277 277 MS2 17/18 Linfeng_122411_rIgG_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 3.15 0.00 0 15 25 2 590.81268 1180.61809 -2.36 29.79 3503 3503 MS2 17/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 518 3.13 0.00 0 50 100 2 590.81561 1180.62395 2.61 31.00 2408 2408 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 496 3.13 0.00 0 23 100 2 590.81543 1180.62358 2.30 31.97 2296 2296 MS2 16/18 Linfeng_20120130_CHD1_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 3.11 0.00 0 52 25 2 663.37756 1325.74785 -4.37 26.39 3032 3032 MS2 18/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 556 3.10 0.00 0 9 100 2 590.81647 1180.62566 4.05 32.03 2451 2451 MS2 17/18 Linfeng_20120130_CHD1_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 386 3.10 0.00 0 5 1 2 590.81421 1180.62114 0.23 25.42 2031 2031 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 3.10 0.00 0 15 25 2 590.81262 1180.61797 -2.46 30.05 3404 3404 MS2 17/18 Linfeng_091311_rIgG_9.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 401 3.09 0.00 1 5 100 2 668.86707 1336.72685 3.64 37.76 4465 4465 MS2 16/20 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 373 3.09 0.00 0 4 21 2 590.81598 1180.62468 3.23 25.57 1980 1980 MS2 17/18 Linfeng_122411_rIgG_9.raw High TVTAmDVVYALKR Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 369 3.08 0.00 1 23 100 2 741.90479 1482.80229 2.53 42.28 5251 5251 MS2 16/24 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 394 3.08 0.00 0 8 25 2 590.81488 1180.62248 1.37 27.94 2529 2529 MS2 17/18 Linfeng_122411_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 369 3.08 0.00 0 12 25 2 590.81274 1180.61821 -2.25 30.16 3419 3419 MS2 17/18 Linfeng_091311_rIgG_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 565 3.07 0.00 0 39 100 2 590.81647 1180.62566 4.05 31.59 2379 2379 MS2 16/18 Linfeng_20120130_CHD1_3.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 325 3.07 0.00 0 24 25 2 567.77661 1134.54595 2.94 16.80 1274 1274 MS2 14/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 562 3.06 0.00 0 11 100 2 590.81610 1180.62493 3.43 32.27 2493 2493 MS2 17/18 Linfeng_20120130_CHD1_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 556 3.06 0.00 0 5 63 2 590.81635 1180.62541 3.85 33.53 3562 3562 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 3.05 0.00 0 13 25 2 590.81500 1180.62273 1.57 28.01 2509 2509 MS2 17/18 Linfeng_122411_rIgG_3.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 528 3.04 0.00 0 43 100 2 590.81586 1180.62444 3.02 29.56 2744 2744 MS2 15/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 3.04 0.00 0 26 25 2 590.81299 1180.61870 -1.84 29.89 3419 3419 MS2 17/18 Linfeng_091311_rIgG_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 364 3.03 0.00 0 6 2 2 495.29428 989.58129 3.43 44.28 5706 5706 MS2 13/14 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 350 3.02 0.00 0 5 18 2 590.81537 1180.62346 2.19 28.78 2811 2811 MS2 17/18 Linfeng_122411_rIgG_6.raw High RISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 217 3.01 0.00 2 12 25 3 578.66669 1733.98551 -3.12 32.08 2920 2920 MS2 26/56 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 538 3.00 0.00 0 40 100 2 590.81592 1180.62456 3.12 31.86 3174 3174 MS2 15/18 Linfeng_20120130_CHD1_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 540 2.99 0.00 0 28 100 2 590.81604 1180.62480 3.33 31.30 2987 2987 MS2 15/18 Linfeng_20120130_CHD1_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.99 0.00 0 7 15 2 590.81506 1180.62285 1.68 28.15 2670 2670 MS2 17/18 Linfeng_122411_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 362 2.98 0.00 0 37 25 2 590.81274 1180.61821 -2.25 30.09 3426 3426 MS2 17/18 Linfeng_091311_rIgG_6.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.96 0.00 0 30 25 2 590.81287 1180.61846 -2.05 29.93 3417 3417 MS2 17/18 Linfeng_091311_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 386 2.96 0.00 0 6 25 2 590.81604 1180.62480 3.33 26.44 2165 2165 MS2 17/18 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 240 2.96 0.00 0 4 12 2 663.37866 1325.75005 -2.71 25.13 2854 2854 MS2 18/22 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 380 2.95 0.00 0 25 25 2 590.81586 1180.62444 3.02 52.20 5466 5466 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.95 0.00 0 15 25 2 590.81122 1180.61516 -4.84 30.85 3648 3648 MS2 17/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 319 2.94 0.00 0 16 25 2 590.81305 1180.61882 -1.74 28.73 2470 2470 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.93 0.00 0 14 25 2 590.81549 1180.62370 2.40 28.88 2406 2406 MS2 17/18 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 526 2.93 0.00 0 36 100 2 590.81580 1180.62432 2.92 31.05 2400 2400 MS2 15/18 Linfeng_20120130_CHD1_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 349 2.93 0.00 0 5 25 2 590.81512 1180.62297 1.78 26.79 2296 2296 MS2 17/18 Linfeng_122411_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 564 2.92 0.00 0 41 100 2 590.81665 1180.62602 4.36 30.79 2652 2652 MS2 17/18 Linfeng_20120130_CHD1_1.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.92 0.00 0 22 100 2 495.29459 989.58190 4.05 45.34 5954 5954 MS2 12/14 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 575 2.89 0.00 0 56 100 2 590.81610 1180.62493 3.43 31.24 2880 2880 MS2 16/18 Linfeng_20120130_CHD1_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 383 2.89 0.00 0 19 25 2 590.81250 1180.61772 -2.67 30.10 3474 3474 MS2 17/18 Linfeng_091311_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 512 2.89 0.00 0 35 100 2 590.81561 1180.62395 2.61 31.67 3130 3130 MS2 17/18 Linfeng_20120130_CHD1_5.raw High TVTAmDVVYALKR Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 391 2.88 0.00 1 15 100 2 741.90723 1482.80718 5.82 41.69 5155 5155 MS2 17/24 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 544 2.87 0.00 0 15 66 2 590.81592 1180.62456 3.12 47.00 6352 6352 MS2 17/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 376 2.87 0.00 0 9 25 3 394.21268 1180.62348 2.21 25.93 2097 2097 MS2 24/36 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 259 2.87 0.00 0 10 25 2 663.37653 1325.74578 -5.93 26.45 3040 3040 MS2 17/22 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 369 2.86 0.00 0 39 100 2 495.29404 989.58080 2.94 46.56 6237 6237 MS2 12/14 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 408 2.83 0.00 0 47 25 2 590.81580 1180.62432 2.92 28.87 2281 2281 MS2 16/18 Linfeng_122411_rIgG_7.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 380 2.82 0.00 0 36 25 3 394.21249 1180.62293 1.74 26.98 2320 2320 MS2 23/36 Linfeng_122411_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 293 2.82 0.00 0 8 25 3 442.59042 1325.75672 2.32 24.07 1871 1871 MS2 21/44 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 479 2.82 0.00 0 24 100 2 590.81519 1180.62309 1.88 31.85 2282 2282 MS2 14/18 Linfeng_20120130_CHD1_7.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 246 2.82 0.00 0 3 1 2 663.38263 1325.75798 3.27 3.06 269 269 MS2 19/22 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 501 2.81 0.00 0 35 100 2 590.81543 1180.62358 2.30 31.62 3118 3118 MS2 15/18 Linfeng_20120130_CHD1_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 517 2.81 0.00 0 25 100 2 590.81555 1180.62383 2.50 31.27 2253 2253 MS2 13/18 Linfeng_20120130_CHD1_6.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 268 2.81 0.00 0 2 3 2 663.38129 1325.75530 1.25 3.15 271 271 MS2 17/22 Linfeng_122411_rIgG_8.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 390 2.80 0.00 1 5 0 3 446.24503 1336.72052 -1.10 3.69 372 372 MS2 23/40 Linfeng_122411_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 526 2.79 0.00 0 5 100 2 567.77698 1134.54668 3.58 15.05 1303 1303 MS2 13/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 383 2.79 0.00 0 29 25 3 394.20990 1180.61515 -4.85 30.02 3536 3536 MS2 20/36 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 405 2.78 0.00 0 13 25 2 590.81641 1180.62554 3.95 28.76 2054 2054 MS2 15/18 Linfeng_122411_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 372 2.77 0.00 0 36 25 2 590.81567 1180.62407 2.71 51.17 5345 5345 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 503 2.77 0.00 0 58 100 2 590.81543 1180.62358 2.30 31.31 3045 3045 MS2 13/18 Linfeng_20120130_CHD1_5.raw High ISGLIYEETRGVLK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 218 2.77 0.00 1 9 25 2 789.45093 1577.89458 3.03 32.79 2919 2919 MS2 18/26 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 22 25 2 590.81567 1180.62407 2.71 54.23 5686 5686 MS2 16/18 Linfeng_122411_rIgG_10.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 425 2.75 0.00 0 5 6 2 663.85516 1326.70305 4.24 42.99 5393 5393 MS2 19/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.74 0.00 0 20 25 2 590.81519 1180.62309 1.88 28.98 2578 2578 MS2 17/18 Linfeng_122411_rIgG_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 358 2.73 0.00 0 26 100 2 495.29431 989.58135 3.49 44.60 4827 4827 MS2 13/14 Linfeng_20120130_CHD1_3.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 241 2.73 0.00 0 5 25 2 663.37927 1325.75127 -1.79 23.06 2053 2053 MS2 18/22 Linfeng_122411_rIgG_6.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 368 2.73 0.00 0 19 100 2 495.29459 989.58190 4.05 44.64 4689 4689 MS2 11/14 Linfeng_20120130_CHD1_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 393 2.72 0.00 0 26 25 2 590.81598 1180.62468 3.23 53.21 5580 5580 MS2 17/18 Linfeng_122411_rIgG_10.raw Medium VFLENVIRDAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 375 2.72 0.00 1 18 25 4 527.03119 2105.10293 0.13 43.99 4451 4451 MS2 29/102 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALKR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 278 2.72 0.00 1 2 25 2 733.90668 1466.80608 1.67 36.62 3505 3505 MS2 18/24 Linfeng_122411_rIgG_10.raw High KTVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M6(Oxidation) CID 1.0000 0.0000 1 1 439 2.72 0.00 1 16 100 2 727.90198 1454.79668 2.94 39.00 4681 4681 MS2 12/24 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 305 2.72 0.00 0 3 18 2 663.37628 1325.74529 -6.30 25.14 2508 2508 MS2 18/22 Linfeng_091311_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 552 2.71 0.00 0 12 41 2 590.81580 1180.62432 2.92 46.90 6320 6320 MS2 17/18 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 237 2.71 0.00 0 12 25 2 663.37866 1325.75005 -2.71 25.47 2784 2784 MS2 16/22 Linfeng_091311_rIgG_9.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 369 2.70 0.00 0 19 100 2 495.29361 989.57994 2.07 44.18 5512 5512 MS2 12/14 Linfeng_20120130_CHD1_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 509 2.69 0.00 0 31 100 2 590.81555 1180.62383 2.50 31.78 3155 3155 MS2 16/18 Linfeng_20120130_CHD1_5.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 370 2.68 0.00 0 17 100 2 495.29407 989.58086 3.00 44.08 5487 5487 MS2 12/14 Linfeng_20120130_CHD1_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 368 2.68 0.00 0 44 25 2 590.81561 1180.62395 2.61 50.14 5224 5224 MS2 16/18 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 455 2.67 0.00 0 35 100 2 655.85718 1310.70708 3.48 41.45 5113 5113 MS2 12/22 Linfeng_20120130_CHD1_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 378 2.66 0.00 0 23 100 2 495.29404 989.58080 2.94 43.26 5456 5456 MS2 13/14 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 247 2.65 0.00 0 21 25 2 663.38245 1325.75762 3.00 24.08 1872 1872 MS2 16/22 Linfeng_122411_rIgG_10.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 463 2.65 0.00 1 14 100 3 446.24744 1336.72776 4.31 38.33 4565 4565 MS2 22/40 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 256 2.64 0.00 0 8 25 3 442.58801 1325.74948 -3.14 23.04 2050 2050 MS2 19/44 Linfeng_122411_rIgG_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 501 2.64 0.00 0 2 100 2 567.77667 1134.54607 3.05 14.02 1238 1238 MS2 14/18 Linfeng_20120130_CHD1_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.64 0.00 0 5 4 2 655.85608 1310.70488 1.81 39.56 3879 3879 MS2 19/22 Linfeng_122411_rIgG_10.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 432 2.64 0.00 0 7 100 2 663.85608 1326.70488 5.62 41.98 5202 5202 MS2 18/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 402 2.64 0.00 0 34 25 2 590.81598 1180.62468 3.23 44.51 4515 4515 MS2 17/18 Linfeng_122411_rIgG_10.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 464 2.62 0.00 1 23 100 3 446.24731 1336.72739 4.04 37.05 4331 4331 MS2 21/40 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 370 2.60 0.00 0 41 25 2 590.81555 1180.62383 2.50 47.08 4844 4844 MS2 17/18 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 239 2.60 0.00 0 12 25 2 663.37897 1325.75066 -2.25 28.22 3287 3287 MS2 17/22 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 298 2.59 0.00 1 16 100 2 663.38226 1325.75725 2.72 22.77 1525 1525 MS2 15/22 Linfeng_20120130_CHD1_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 318 2.59 0.00 1 5 100 3 442.59125 1325.75919 4.18 24.70 2016 2016 MS2 18/44 Linfeng_20120130_CHD1_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 275 2.58 0.00 0 36 25 2 567.77234 1134.53740 -4.59 17.74 1808 1808 MS2 16/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 377 2.57 0.00 0 57 25 3 394.21283 1180.62394 2.60 24.91 1971 1971 MS2 23/36 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 2.56 0.00 0 34 25 2 590.81226 1180.61724 -3.08 32.78 3907 3907 MS2 16/18 Linfeng_091311_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 303 2.55 0.00 1 32 100 2 663.38226 1325.75725 2.72 27.29 2376 2376 MS2 14/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 373 2.55 0.00 0 40 25 2 590.81561 1180.62395 2.61 49.14 5104 5104 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 360 2.54 0.00 0 45 25 2 590.81219 1180.61711 -3.18 29.89 3457 3457 MS2 17/18 Linfeng_091311_rIgG_2.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 296 2.54 0.00 0 6 1 3 442.59021 1325.75608 1.84 3.07 270 270 MS2 18/44 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 262 2.53 0.00 0 8 12 2 663.38025 1325.75322 -0.32 3.58 362 362 MS2 17/22 Linfeng_122411_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 510 2.53 0.00 0 60 100 2 590.81537 1180.62346 2.19 31.22 3025 3025 MS2 14/18 Linfeng_20120130_CHD1_5.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.51 0.00 0 9 4 2 495.29251 989.57775 -0.15 0.56 81 81 MS2 12/14 Linfeng_122411_rIgG_1.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 243 2.51 0.00 0 19 25 2 663.37860 1325.74993 -2.80 25.47 2845 2845 MS2 14/22 Linfeng_091311_rIgG_8.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 284 2.50 0.00 0 3 1 3 442.58963 1325.75434 0.52 3.14 269 269 MS2 20/44 Linfeng_122411_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 401 2.50 0.00 0 29 25 2 590.81384 1180.62041 -0.39 27.70 2331 2331 MS2 17/18 Linfeng_122411_rIgG_10.raw Medium RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 454 2.50 0.00 1 17 100 3 446.24765 1336.72840 4.79 38.39 4576 4576 MS2 24/40 Linfeng_20120130_CHD1_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.50 0.00 0 23 100 2 495.29401 989.58074 2.87 44.66 5304 5304 MS2 11/14 Linfeng_20120130_CHD1_2.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 292 2.49 0.00 0 4 13 2 495.29382 989.58037 2.50 33.56 3017 3017 MS2 13/14 Linfeng_122411_rIgG_9.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 263 2.48 0.00 0 16 11 2 495.29254 989.57781 -0.09 33.48 3102 3102 MS2 13/14 Linfeng_122411_rIgG_10.raw Medium RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 461 2.48 0.00 1 13 100 3 446.24738 1336.72757 4.18 38.07 4516 4516 MS2 21/40 Linfeng_20120130_CHD1_10.raw High KTVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 348 2.46 0.00 1 35 25 2 719.89996 1438.79265 -3.36 36.49 4393 4393 MS2 16/24 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 402 2.45 0.00 0 10 100 2 495.29541 989.58354 5.71 46.88 6310 6310 MS2 12/14 Linfeng_20120130_CHD1_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 234 2.43 0.00 0 0 25 2 663.38367 1325.76006 4.84 24.24 1738 1738 MS2 15/22 Linfeng_122411_rIgG_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 474 2.42 0.00 0 38 100 2 590.81702 1180.62676 4.98 32.25 2940 2940 MS2 14/18 Linfeng_20120130_CHD1_1.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 390 2.42 0.00 0 46 25 2 590.81494 1180.62261 1.47 48.10 4973 4973 MS2 17/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 404 2.41 0.00 0 70 25 2 590.81488 1180.62248 1.37 31.10 2788 2788 MS2 16/18 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 395 2.40 0.00 0 33 25 2 590.81500 1180.62273 1.57 24.41 1909 1909 MS2 16/18 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 341 2.39 0.00 0 4 25 2 655.85797 1310.70867 4.70 39.34 2958 2958 MS2 17/22 Linfeng_122411_rIgG_1.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 361 2.39 0.00 0 27 25 2 655.85400 1310.70073 -1.36 46.40 5655 5655 MS2 18/22 Linfeng_091311_rIgG_10.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 519 2.39 0.00 0 17 100 2 663.85522 1326.70317 4.33 0.98 146 146 MS2 11/22 Linfeng_20120130_CHD1_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 356 2.39 0.00 0 29 100 2 495.29401 989.58074 2.87 44.75 5327 5327 MS2 12/14 Linfeng_20120130_CHD1_2.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 280 2.38 0.00 0 11 2 2 495.29214 989.57701 -0.89 33.74 3190 3190 MS2 13/14 Linfeng_122411_rIgG_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 358 2.38 0.00 0 34 100 2 495.29422 989.58116 3.31 44.38 5791 5791 MS2 11/14 Linfeng_20120130_CHD1_8.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 442 2.37 0.00 1 29 100 2 668.86737 1336.72746 4.09 38.76 4640 4640 MS2 14/20 Linfeng_20120130_CHD1_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 274 2.37 0.00 0 1 6 2 495.29077 989.57427 -3.66 34.98 3829 3829 MS2 13/14 Linfeng_091311_rIgG_1.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 481 2.36 0.00 0 7 100 2 663.85535 1326.70342 4.52 1.66 295 295 MS2 14/22 Linfeng_20120130_CHD1_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 280 2.34 0.00 0 9 25 2 567.77362 1134.53996 -2.33 17.69 1732 1732 MS2 15/18 Linfeng_091311_rIgG_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 256 2.34 0.00 0 3 25 2 495.29297 989.57866 0.78 4.54 481 481 MS2 13/14 Linfeng_122411_rIgG_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 347 2.34 0.00 0 22 100 2 495.29416 989.58104 3.18 44.85 4732 4732 MS2 11/14 Linfeng_20120130_CHD1_9.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 357 2.33 0.00 0 57 25 2 655.85626 1310.70525 2.09 39.73 3957 3957 MS2 18/22 Linfeng_122411_rIgG_8.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 285 2.33 0.00 0 13 25 2 495.29108 989.57488 -3.05 35.08 4132 4132 MS2 12/14 Linfeng_091311_rIgG_8.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 467 2.33 0.00 0 26 100 2 663.85559 1326.70391 4.88 11.20 690 690 MS2 16/22 Linfeng_20120130_CHD1_1.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 452 2.32 0.00 1 37 100 2 668.86755 1336.72783 4.37 39.19 4717 4717 MS2 10/20 Linfeng_20120130_CHD1_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.31 0.00 0 19 18 2 495.29297 989.57866 0.78 33.63 3385 3385 MS2 13/14 Linfeng_122411_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 379 2.31 0.00 0 55 25 2 590.81598 1180.62468 3.23 54.18 6587 6587 MS2 14/18 Linfeng_091311_rIgG_10.raw High GVLKVFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 46 2.31 0.00 1 12 25 2 693.92853 1386.84978 2.13 45.01 4578 4578 MS2 18/22 Linfeng_122411_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 405 2.31 0.00 0 3 27 2 495.29355 989.57982 1.95 46.95 6336 6336 MS2 12/14 Linfeng_20120130_CHD1_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 273 2.30 0.00 0 10 25 2 567.77332 1134.53935 -2.87 17.88 1784 1784 MS2 14/18 Linfeng_091311_rIgG_2.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 318 2.29 0.00 0 36 25 2 655.85706 1310.70683 3.30 39.56 3768 3768 MS2 18/22 Linfeng_122411_rIgG_9.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 281 2.29 0.00 1 28 100 2 663.38367 1325.76006 4.84 27.46 2405 2405 MS2 13/22 Linfeng_20120130_CHD1_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 2.28 0.00 0 10 20 2 495.29245 989.57762 -0.27 33.90 3474 3474 MS2 13/14 Linfeng_122411_rIgG_6.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 265 2.28 0.00 0 54 25 2 567.77399 1134.54070 -1.69 17.76 1730 1730 MS2 14/18 Linfeng_091311_rIgG_4.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 290 2.28 0.00 0 6 25 2 495.29114 989.57500 -2.92 34.85 4178 4178 MS2 12/14 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 12 25 2 495.29141 989.57555 -2.37 34.98 4077 4077 MS2 12/14 Linfeng_091311_rIgG_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.28 0.00 0 46 25 2 590.81311 1180.61894 -1.63 58.64 6996 6996 MS2 15/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 287 2.28 0.00 0 9 3 2 495.29208 989.57689 -1.01 33.59 3525 3525 MS2 13/14 Linfeng_122411_rIgG_5.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 426 2.27 0.00 0 23 100 2 663.85498 1326.70268 3.96 0.84 104 104 MS2 13/22 Linfeng_20120130_CHD1_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.27 0.00 0 28 25 2 567.77380 1134.54033 -2.01 19.39 2045 2045 MS2 15/18 Linfeng_091311_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.26 0.00 0 81 25 2 590.81427 1180.62126 0.33 51.66 6317 6317 MS2 15/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 2.26 0.00 0 42 100 2 495.29413 989.58098 3.12 44.73 5673 5673 MS2 12/14 Linfeng_20120130_CHD1_4.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 359 2.25 0.00 0 47 25 2 590.81543 1180.62358 2.30 45.92 4695 4695 MS2 17/18 Linfeng_122411_rIgG_10.raw High TVTAMDVVYALK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 330 2.24 0.00 0 5 4 2 655.85352 1310.69975 -2.10 40.48 4904 4904 MS2 19/22 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 270 2.24 0.00 0 1 25 2 495.29123 989.57518 -2.74 35.08 4057 4057 MS2 13/14 Linfeng_091311_rIgG_9.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 277 2.24 0.00 0 5 25 2 495.29138 989.57549 -2.43 35.14 4081 4081 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 290 2.24 0.00 0 3 25 2 495.29144 989.57561 -2.31 34.85 4069 4069 MS2 13/14 Linfeng_091311_rIgG_3.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 282 2.20 0.00 0 4 25 2 495.29144 989.57561 -2.31 35.14 4071 4071 MS2 12/14 Linfeng_091311_rIgG_7.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 266 2.18 0.00 0 6 25 2 495.29092 989.57457 -3.35 34.90 4121 4121 MS2 13/14 Linfeng_091311_rIgG_2.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 398 2.18 0.00 0 33 25 2 590.81415 1180.62102 0.13 53.12 6480 6480 MS2 15/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 293 2.17 0.00 0 48 25 2 495.29379 989.58031 2.44 53.48 5607 5607 MS2 13/14 Linfeng_122411_rIgG_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 371 2.17 0.00 0 22 25 2 590.81525 1180.62322 1.99 42.37 4241 4241 MS2 16/18 Linfeng_122411_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 268 2.15 0.00 0 15 25 2 567.77313 1134.53899 -3.19 17.91 1796 1796 MS2 14/18 Linfeng_091311_rIgG_8.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 2.15 0.00 0 57 25 2 590.81580 1180.62432 2.92 24.56 1866 1866 MS2 14/18 Linfeng_122411_rIgG_9.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 510 2.13 0.00 0 78 100 2 590.81561 1180.62395 2.61 29.45 2726 2726 MS2 16/18 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 374 2.13 0.00 0 36 25 2 590.81586 1180.62444 3.02 55.26 5790 5790 MS2 15/18 Linfeng_122411_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 273 2.13 0.00 0 15 25 2 567.77441 1134.54155 -0.93 18.00 1729 1729 MS2 12/18 Linfeng_091311_rIgG_5.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 363 2.12 0.00 0 42 25 2 590.81158 1180.61589 -4.22 60.04 7107 7107 MS2 15/18 Linfeng_091311_rIgG_10.raw High RISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 384 2.12 0.00 1 7 2 2 668.86414 1336.72099 -0.75 3.70 373 373 MS2 16/20 Linfeng_122411_rIgG_10.raw High DAVTYTEHAK Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 294 2.10 0.00 0 5 25 2 567.77356 1134.53984 -2.44 20.46 2198 2198 MS2 14/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 365 2.09 0.00 0 100 2 495.29474 989.58220 4.35 11.19 688 688 MS2 11/14 Linfeng_20120130_CHD1_1.raw High TVTAmDVVYALK Unambiguous 1 1 IPI00453473.6 M5(Oxidation) CID 1.0000 0.0000 1 1 444 2.05 0.00 0 17 100 2 663.85510 1326.70293 4.15 1.33 204 204 MS2 13/22 Linfeng_20120130_CHD1_10.raw High ISGLIYEETR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 344 2.05 0.00 0 17 25 2 590.81519 1180.62309 1.88 56.15 6780 6780 MS2 15/18 Linfeng_091311_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 300 2.05 0.00 0 50 25 2 495.29373 989.58019 2.32 44.48 4511 4511 MS2 12/14 Linfeng_122411_rIgG_10.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 323 2.05 0.00 0 54 25 2 495.29327 989.57927 1.39 46.88 4818 4818 MS2 11/14 Linfeng_122411_rIgG_10.raw High DNIQGITKPAIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 241 2.04 0.00 0 42 25 2 663.37903 1325.75078 -2.16 25.51 2814 2814 MS2 15/22 Linfeng_091311_rIgG_6.raw High VFLENVIR Unambiguous 1 1 IPI00453473.6 CID 1.0000 0.0000 1 1 289 2.03 0.00 0 2 25 2 495.29401 989.58074 2.87 34.10 2930 2930 MS2 12/14 Linfeng_122411_rIgG_7.raw IPI00744148.2 Isoform 1 of Core histone macro-H2A.1 56.37 6 19 19 68 59.00 37.94 13 18 60.76 44.44 14 19 112.41 42.28 10 31 369 39.2 9.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 388 5.74 0.00 0 2 100 2 1064.01233 2127.01738 3.99 34.97 2744 2744 MS2 21/42 Linfeng_20120130_CHD1_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 247 5.63 0.00 0 0 100 2 967.04089 1933.07451 -0.46 55.21 5842 5842 MS2 25/32 Linfeng_20120130_CHD1_6.raw High IGVGAPVYmAAVLEYLTAEILELAGNAAR Unambiguous 4 1 IPI00744148.2 M9(Oxidation) CID 1.0000 0.0000 1 1 281 5.60 0.00 0 20 93 3 997.86835 2991.59049 1.46 55.46 5916 5916 MS2 38/112 Linfeng_20120130_CHD1_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 155 5.08 0.00 0 0 12 2 1064.00537 2127.00347 -2.56 33.41 3860 3860 MS2 25/42 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 163 4.95 0.00 0 0 25 2 1064.00586 2127.00444 -2.10 32.34 3721 3721 MS2 26/42 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 409 4.93 0.00 0 0 100 2 1064.01172 2127.01616 3.41 37.19 3061 3061 MS2 20/42 Linfeng_20120130_CHD1_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 142 4.88 0.00 0 11 25 2 993.56915 1986.13103 -3.68 38.08 4457 4457 MS2 21/38 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 202 4.81 0.00 0 1 25 2 1064.01074 2127.01421 2.49 32.27 3268 3268 MS2 25/42 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 205 4.80 0.00 0 2 25 3 645.03204 1933.08158 3.20 39.81 4211 4211 MS2 36/64 Linfeng_122411_rIgG_6.raw High FVIHcNSPVWGADKcEELLEK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 4.76 0.00 1 7 25 3 844.40399 2531.19742 -3.33 33.54 3877 3877 MS2 30/80 Linfeng_091311_rIgG_6.raw High IGVGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 321 4.63 0.00 0 80 100 3 992.52722 2975.56711 -8.10 55.96 7771 7771 MS2 32/112 Linfeng_20120130_CHD1_10.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 189 4.55 0.00 0 12 25 2 967.04413 1933.08098 2.89 39.88 4219 4219 MS2 28/32 Linfeng_122411_rIgG_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 238 4.52 0.00 0 7 9 3 645.02881 1933.07187 -1.82 40.64 4777 4777 MS2 34/64 Linfeng_091311_rIgG_6.raw High IGVGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 315 4.39 0.00 0 5 100 3 992.52881 2975.57187 -6.50 55.90 7757 7757 MS2 30/112 Linfeng_20120130_CHD1_10.raw High IGVGAPVYMAAVLEYLTAEILELAGNAAR Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 357 4.32 0.00 0 11 100 3 992.52557 2975.56217 -9.76 56.29 7840 7840 MS2 28/112 Linfeng_20120130_CHD1_10.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 248 4.23 0.00 0 25 55 2 967.04254 1933.07781 1.25 55.23 5848 5848 MS2 22/32 Linfeng_20120130_CHD1_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 77 4.01 0.00 1 60 100 2 667.90753 1334.80779 2.62 34.77 2711 2711 MS2 18/24 Linfeng_20120130_CHD1_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 324 3.95 0.00 0 12 100 2 908.49292 1815.97856 4.01 39.56 3347 3347 MS2 19/38 Linfeng_20120130_CHD1_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 88 3.89 0.00 1 67 100 2 667.90741 1334.80754 2.44 34.52 2678 2678 MS2 18/24 Linfeng_20120130_CHD1_6.raw High KGGKEFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 227 3.69 0.00 2 10 25 3 525.63562 1574.89231 1.36 37.29 3897 3897 MS2 25/52 Linfeng_122411_rIgG_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 109 3.68 0.00 0 2 25 2 993.57379 1986.14031 0.99 37.17 3882 3882 MS2 16/38 Linfeng_122411_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 239 3.67 0.00 0 16 25 3 709.67590 2127.01316 2.00 31.11 3118 3118 MS2 33/84 Linfeng_122411_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 81 3.64 0.00 1 55 100 2 667.90833 1334.80937 3.81 34.61 2693 2693 MS2 18/24 Linfeng_20120130_CHD1_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 220 3.59 0.00 0 3 25 4 484.02548 1933.08010 2.44 39.90 4222 4222 MS2 42/96 Linfeng_122411_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 82 3.57 0.00 1 62 100 2 667.90753 1334.80779 2.62 34.57 2685 2685 MS2 18/24 Linfeng_20120130_CHD1_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 233 3.56 0.00 0 3 15 3 709.67609 2127.01371 2.26 32.26 3266 3266 MS2 39/84 Linfeng_122411_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 81 3.53 0.00 1 60 100 2 667.90826 1334.80925 3.72 35.07 2759 2759 MS2 18/24 Linfeng_20120130_CHD1_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 77 3.53 0.00 1 57 100 2 667.90814 1334.80901 3.53 35.21 2781 2781 MS2 17/24 Linfeng_20120130_CHD1_6.raw High GGKEFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 345 3.44 0.00 1 3 25 3 482.93762 1446.79831 2.16 40.23 4263 4263 MS2 26/48 Linfeng_122411_rIgG_6.raw High FVIHcNSPVWGADK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.38 0.00 0 26 25 2 815.39435 1629.78142 -1.76 30.76 3516 3516 MS2 21/26 Linfeng_091311_rIgG_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 213 3.38 0.00 0 9 8 3 709.67230 2127.00235 -3.08 33.40 3859 3859 MS2 36/84 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 88 3.37 0.00 1 50 100 2 667.90814 1334.80901 3.53 34.94 2739 2739 MS2 18/24 Linfeng_20120130_CHD1_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 352 3.29 0.00 0 26 100 2 908.49353 1815.97978 4.68 39.67 3364 3364 MS2 22/38 Linfeng_20120130_CHD1_6.raw High AASADSTTEGTPADGFTVLSTK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 473 3.27 0.00 0 8 100 3 709.67639 2127.01462 2.69 37.38 3085 3085 MS2 29/84 Linfeng_20120130_CHD1_6.raw High HILLAVANDEELNQLLK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 232 3.27 0.00 0 28 25 3 645.02826 1933.07022 -2.67 40.77 4783 4783 MS2 29/64 Linfeng_091311_rIgG_7.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 79 3.25 0.00 1 62 100 2 667.90808 1334.80889 3.44 35.15 2771 2771 MS2 19/24 Linfeng_20120130_CHD1_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 77 3.23 0.00 1 54 100 2 667.90833 1334.80937 3.81 35.00 2749 2749 MS2 19/24 Linfeng_20120130_CHD1_6.raw High AISSYFVSTmSSSIK Unambiguous 5 1 IPI00744148.2 M10(Oxidation) CID 1.0000 0.0000 1 1 543 3.17 0.00 0 42 100 2 812.40399 1623.80071 4.43 38.13 3178 3178 MS2 20/28 Linfeng_20120130_CHD1_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 89 3.15 0.00 1 60 100 2 667.90686 1334.80644 1.61 34.64 2696 2696 MS2 18/24 Linfeng_20120130_CHD1_6.raw High FVIHcNSPVWGADK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 258 3.13 0.00 0 19 25 3 543.93304 1629.78458 0.17 29.60 2920 2920 MS2 26/52 Linfeng_122411_rIgG_6.raw High FVIHcNSPVWGADKcEELLEK Unambiguous 5 1 IPI00744148.2 C5(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 234 3.09 0.00 1 4 10 4 633.55505 2531.19838 -2.95 33.42 3861 3861 MS2 40/120 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 89 3.03 0.00 1 67 100 2 667.90729 1334.80730 2.25 34.46 2669 2669 MS2 16/24 Linfeng_20120130_CHD1_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 363 3.01 0.00 0 19 25 3 605.99603 1815.97354 1.25 30.69 3063 3063 MS2 31/76 Linfeng_122411_rIgG_6.raw High AISSYFVSTmSSSIK Unambiguous 5 1 IPI00744148.2 M10(Oxidation) CID 1.0000 0.0000 1 1 460 2.97 0.00 0 49 100 2 812.40167 1623.79607 1.58 38.45 3262 3262 MS2 20/28 Linfeng_20120130_CHD1_7.raw High NcLALADDKK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 430 2.96 0.00 1 24 25 3 383.19687 1147.57605 -1.39 19.93 2051 2051 MS2 23/36 Linfeng_091311_rIgG_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 351 2.92 0.00 0 10 100 2 908.49329 1815.97930 4.41 39.48 3337 3337 MS2 16/38 Linfeng_20120130_CHD1_6.raw High GVTIASGGVLPNIHPELLAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 124 2.87 0.00 0 6 35 3 662.71863 1986.14133 1.51 48.42 5007 5007 MS2 26/76 Linfeng_20120130_CHD1_6.raw High NGPLEVAGAAVSAGHGLPAK Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 489 2.87 0.00 0 25 100 3 605.99664 1815.97538 2.25 39.14 3293 3293 MS2 21/76 Linfeng_20120130_CHD1_6.raw High NcLALADDK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.81 0.00 0 14 25 2 510.24329 1019.47930 -3.32 23.93 2597 2597 MS2 14/16 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 96 2.79 0.00 1 39 25 2 667.90381 1334.80034 -2.96 27.83 3122 3122 MS2 19/24 Linfeng_091311_rIgG_6.raw High NcLALADDKK Unambiguous 5 1 IPI00744148.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 514 2.75 0.00 1 12 25 3 383.19760 1147.57825 0.53 3.69 378 378 MS2 21/36 Linfeng_122411_rIgG_6.raw High LEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 147 2.70 0.00 0 42 100 2 575.34875 1149.69023 2.07 30.35 2159 2159 MS2 14/20 Linfeng_20120130_CHD1_6.raw High LEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 125 2.54 0.00 0 41 25 2 575.34839 1149.68950 1.43 27.79 2679 2679 MS2 15/20 Linfeng_122411_rIgG_6.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 611 2.53 0.00 0 5 100 2 546.29675 1091.58623 1.64 38.63 3233 3233 MS2 16/20 Linfeng_20120130_CHD1_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 410 2.47 0.00 0 24 25 2 458.27441 915.54155 0.47 30.67 3060 3060 MS2 14/16 Linfeng_122411_rIgG_6.raw High LEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 153 2.40 0.00 0 37 25 2 575.34589 1149.68450 -2.92 29.53 3350 3350 MS2 16/20 Linfeng_091311_rIgG_6.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 440 2.39 0.00 0 22 25 2 546.29736 1091.58745 2.76 32.26 3267 3267 MS2 16/20 Linfeng_122411_rIgG_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 350 2.38 0.00 0 9 14 2 458.27316 915.53905 -2.26 30.07 3043 3043 MS2 13/16 Linfeng_122411_rIgG_5.raw High EFVEAVLELR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 439 2.38 0.00 0 8 17 2 602.83093 1204.65459 -2.24 41.25 4854 4854 MS2 16/18 Linfeng_091311_rIgG_6.raw High GKLEAIITPPPAK Unambiguous 4 1 IPI00744148.2 CID 1.0000 0.0000 1 1 84 2.25 0.00 1 36 25 2 667.90717 1334.80705 2.07 26.51 2510 2510 MS2 17/24 Linfeng_122411_rIgG_6.raw High SLFLGQK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 272 2.23 0.00 0 5 11 2 396.73328 792.45928 -2.74 28.89 3266 3266 MS2 10/12 Linfeng_091311_rIgG_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 631 2.15 0.00 0 22 100 2 458.27576 915.54424 3.40 35.92 2904 2904 MS2 12/16 Linfeng_20120130_CHD1_6.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 381 2.08 0.00 0 27 25 2 458.27283 915.53838 -3.00 32.43 3723 3723 MS2 13/16 Linfeng_091311_rIgG_7.raw High AGVIFPVGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 326 2.05 0.00 0 11 25 2 458.27267 915.53807 -3.33 32.23 3707 3707 MS2 13/16 Linfeng_091311_rIgG_6.raw High cEELLEK Unambiguous 5 1 IPI00744148.2 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 278 2.03 0.00 0 21 25 2 460.72375 920.44023 0.90 4.71 528 528 MS2 10/12 Linfeng_122411_rIgG_6.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 523 2.02 0.00 0 47 100 2 546.29834 1091.58940 4.55 38.32 3201 3201 MS2 12/20 Linfeng_20120130_CHD1_6.raw High SLFLGQK Unambiguous 3 1 IPI00744148.2 CID 1.0000 0.0000 1 1 286 2.02 0.00 0 15 25 2 396.73480 792.46233 1.11 24.74 2317 2317 MS2 10/12 Linfeng_122411_rIgG_5.raw High SIAFPSIGSGR Unambiguous 5 1 IPI00744148.2 CID 1.0000 0.0000 1 1 393 2.01 0.00 0 33 20 2 546.29443 1091.58159 -2.61 33.29 3845 3845 MS2 15/20 Linfeng_091311_rIgG_6.raw IPI00384444.6 "Keratin, type I cytoskeletal 14" 54.66 20 9 24 357 283.40 38.77 16 100 132.65 32.20 15 46 695.93 40.68 17 211 472 51.5 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 387 6.55 0.00 0 17 100 3 770.36249 2309.07291 3.81 29.55 2434 2434 MS2 38/84 Linfeng_20120130_CHD1_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 385 6.44 0.00 0 6 66 3 770.36267 2309.07346 4.05 29.46 2521 2521 MS2 41/84 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 378 6.25 0.00 0 16 100 3 770.36200 2309.07145 3.18 29.04 2568 2568 MS2 42/84 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 6.21 0.00 0 17 25 3 770.35748 2309.05790 -2.69 27.70 3087 3087 MS2 41/84 Linfeng_091311_rIgG_9.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 394 5.93 0.00 0 25 100 3 770.36237 2309.07254 3.65 29.30 2149 2149 MS2 38/84 Linfeng_20120130_CHD1_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 149 5.83 0.00 0 16 25 3 770.36029 2309.06632 0.96 26.59 2521 2521 MS2 40/84 Linfeng_122411_rIgG_6.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 313 5.77 0.00 0 0 100 2 1051.48926 2101.97124 -5.12 32.39 3307 3307 MS2 28/40 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 404 5.74 0.00 0 29 100 3 770.36340 2309.07566 5.00 29.59 2103 2103 MS2 36/84 Linfeng_20120130_CHD1_3.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 436 5.61 0.00 0 0 100 2 1043.50183 2085.99639 4.46 38.71 4419 4419 MS2 24/40 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 5.58 0.00 0 3 25 3 770.35797 2309.05936 -2.06 27.71 3057 3057 MS2 44/84 Linfeng_091311_rIgG_5.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 466 5.57 0.00 0 2 100 2 1043.50208 2085.99687 4.69 37.56 4093 4093 MS2 26/40 Linfeng_20120130_CHD1_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 141 5.56 0.00 0 6 25 3 770.35822 2309.06009 -1.74 27.56 3097 3097 MS2 43/84 Linfeng_091311_rIgG_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 138 5.53 0.00 0 15 25 3 770.35785 2309.05899 -2.22 27.64 2841 2841 MS2 41/84 Linfeng_091311_rIgG_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 136 5.53 0.00 0 7 25 3 770.35760 2309.05826 -2.53 27.77 3114 3114 MS2 44/84 Linfeng_091311_rIgG_6.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 454 5.48 0.00 0 3 100 2 1043.50000 2085.99272 2.70 37.82 4475 4475 MS2 25/40 Linfeng_20120130_CHD1_10.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 468 5.30 0.00 0 5 100 2 1043.50403 2086.00078 6.56 38.18 4226 4226 MS2 27/40 Linfeng_20120130_CHD1_1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 388 5.29 0.00 0 0 100 2 1043.49976 2085.99224 2.47 37.56 4549 4549 MS2 27/40 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 366 5.27 0.00 0 39 100 3 770.36182 2309.07090 2.94 29.41 2084 2084 MS2 32/84 Linfeng_20120130_CHD1_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 320 5.25 0.00 0 0 100 2 1155.03931 2309.07134 3.13 29.71 2565 2565 MS2 20/42 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 379 5.22 0.00 0 43 100 3 770.36218 2309.07199 3.41 28.98 2555 2555 MS2 37/84 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 391 5.14 0.00 0 42 100 3 770.36279 2309.07383 4.21 29.20 2686 2686 MS2 33/84 Linfeng_20120130_CHD1_10.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 306 5.13 0.00 0 0 100 2 1051.48792 2101.96855 -6.40 32.34 3294 3294 MS2 28/40 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 375 5.09 0.00 0 40 100 3 770.36139 2309.06961 2.38 29.16 2131 2131 MS2 31/84 Linfeng_20120130_CHD1_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 137 5.08 0.00 0 3 25 3 770.35785 2309.05899 -2.22 27.54 3138 3138 MS2 44/84 Linfeng_091311_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 388 5.08 0.00 0 32 100 3 770.36249 2309.07291 3.81 29.72 2116 2116 MS2 36/84 Linfeng_20120130_CHD1_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 284 5.05 0.00 0 0 100 2 1155.03906 2309.07085 2.92 29.42 2514 2514 MS2 20/42 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 390 5.04 0.00 0 30 100 3 770.36292 2309.07419 4.37 29.21 2140 2140 MS2 34/84 Linfeng_20120130_CHD1_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 391 4.94 0.00 0 26 100 3 770.36261 2309.07328 3.97 28.96 2338 2338 MS2 40/84 Linfeng_20120130_CHD1_1.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 459 4.93 0.00 0 6 100 2 1043.50183 2085.99639 4.46 37.75 3727 3727 MS2 26/40 Linfeng_20120130_CHD1_2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 377 4.82 0.00 0 4 100 2 1051.49756 2101.98784 2.78 32.12 3236 3236 MS2 26/40 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 384 4.77 0.00 0 42 100 3 770.36224 2309.07218 3.49 29.08 2450 2450 MS2 35/84 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 356 4.75 0.00 0 5 100 2 1051.50024 2101.99321 5.33 32.07 2902 2902 MS2 22/40 Linfeng_20120130_CHD1_1.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 393 4.74 0.00 0 32 100 3 770.36237 2309.07254 3.65 29.69 2112 2112 MS2 36/84 Linfeng_20120130_CHD1_3.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 368 4.72 0.00 0 1 100 2 1051.49817 2101.98906 3.36 32.47 2358 2358 MS2 21/40 Linfeng_20120130_CHD1_7.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 378 4.63 0.00 0 0 100 2 1051.49805 2101.98882 3.24 32.35 2507 2507 MS2 23/40 Linfeng_20120130_CHD1_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 386 4.61 0.00 0 39 100 3 770.36230 2309.07236 3.57 29.56 2099 2099 MS2 34/84 Linfeng_20120130_CHD1_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 4.56 0.00 0 16 25 3 685.37823 2054.12015 -1.94 40.56 4768 4768 MS2 38/72 Linfeng_091311_rIgG_6.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 352 4.55 0.00 0 3 100 2 1051.49854 2101.98979 3.70 32.18 3075 3075 MS2 24/40 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 322 4.50 0.00 0 6 100 2 1051.49670 2101.98613 1.96 33.20 3305 3305 MS2 20/40 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEMDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 441 4.46 0.00 0 4 100 2 1043.50281 2085.99834 5.39 37.68 4226 4226 MS2 22/40 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 368 4.46 0.00 0 6 100 2 1051.49951 2101.99175 4.63 32.28 2621 2621 MS2 21/40 Linfeng_20120130_CHD1_2.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 393 4.45 0.00 0 3 100 2 1051.49915 2101.99101 4.29 32.29 3285 3285 MS2 25/40 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 392 4.43 0.00 0 38 100 3 770.36298 2309.07437 4.44 29.25 2695 2695 MS2 35/84 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 360 4.38 0.00 0 51 100 3 770.36176 2309.07071 2.86 29.04 2442 2442 MS2 33/84 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 427 4.37 0.00 0 10 100 3 701.33472 2101.98960 3.61 32.46 3325 3325 MS2 29/80 Linfeng_20120130_CHD1_10.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 238 4.36 0.00 0 14 25 3 685.38141 2054.12967 2.69 39.20 3974 3974 MS2 39/72 Linfeng_122411_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 388 4.35 0.00 0 49 100 3 770.36243 2309.07273 3.73 29.49 2093 2093 MS2 35/84 Linfeng_20120130_CHD1_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 232 4.33 0.00 0 6 25 3 685.38104 2054.12857 2.16 39.31 3967 3967 MS2 39/72 Linfeng_122411_rIgG_3.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 298 4.29 0.00 0 7 25 3 685.37787 2054.11905 -2.48 40.25 4756 4756 MS2 37/72 Linfeng_091311_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 509 4.27 0.00 0 4 81 2 651.33557 1301.66387 4.19 27.48 2142 2142 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 4.17 0.00 0 29 17 3 685.37732 2054.11740 -3.28 40.32 4559 4559 MS2 38/72 Linfeng_091311_rIgG_1.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 348 4.16 0.00 0 15 100 2 1051.49683 2101.98638 2.08 32.38 3193 3193 MS2 22/40 Linfeng_20120130_CHD1_8.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 389 4.13 0.00 0 44 100 3 770.36310 2309.07474 4.60 29.33 2076 2076 MS2 32/84 Linfeng_20120130_CHD1_3.raw High TMQNLEIELQSQLSmK Unambiguous 2 1 IPI00384444.6 M15(Oxidation) CID 1.0000 0.0000 1 1 583 4.04 0.00 0 1 6 3 636.98474 1908.93967 -0.50 48.53 6559 6559 MS2 25/60 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 390 4.03 0.00 0 38 100 3 770.36243 2309.07273 3.73 29.44 2088 2088 MS2 33/84 Linfeng_20120130_CHD1_3.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 160 4.01 0.00 0 4 25 3 770.36139 2309.06961 2.38 26.60 2034 2034 MS2 35/84 Linfeng_122411_rIgG_7.raw High DAEEWFFTKTEELNR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 227 4.01 0.00 1 15 25 3 638.96881 1914.89188 2.59 39.19 3567 3567 MS2 31/56 Linfeng_122411_rIgG_7.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 251 3.99 0.00 0 15 25 3 685.38037 2054.12656 1.18 39.41 3594 3594 MS2 37/72 Linfeng_122411_rIgG_7.raw High TmQNLEIELQSQLSmK Unambiguous 2 1 IPI00384444.6 M2(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 413 3.97 0.00 0 22 100 2 962.97095 1924.93462 -0.47 43.75 5441 5441 MS2 20/30 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 436 3.85 0.00 0 8 100 3 701.33435 2101.98850 3.09 32.54 3342 3342 MS2 26/80 Linfeng_20120130_CHD1_10.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 275 3.80 0.00 0 18 25 3 685.37756 2054.11814 -2.92 40.60 4762 4762 MS2 38/72 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 508 3.70 0.00 0 23 100 2 651.33472 1301.66216 2.88 24.45 1652 1652 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 502 3.70 0.00 0 20 100 2 651.33502 1301.66277 3.35 27.38 2312 2312 MS2 17/22 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 481 3.68 0.00 0 33 100 2 651.33533 1301.66338 3.82 26.47 1954 1954 MS2 18/22 Linfeng_20120130_CHD1_4.raw High TmQNLEIELQSQLSmK Unambiguous 2 1 IPI00384444.6 M2(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 497 3.66 0.00 0 19 100 3 642.31799 1924.93943 2.02 43.53 5389 5389 MS2 26/60 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 480 3.66 0.00 0 28 100 2 651.33612 1301.66496 5.03 24.53 1705 1705 MS2 15/22 Linfeng_20120130_CHD1_1.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 280 3.65 0.00 0 25 25 3 685.37689 2054.11612 -3.90 40.54 4787 4787 MS2 35/72 Linfeng_091311_rIgG_4.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 317 3.64 0.00 0 13 3 3 685.37854 2054.12107 -1.50 48.56 6569 6569 MS2 29/72 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 493 3.62 0.00 0 35 100 2 651.33557 1301.66387 4.19 28.50 2334 2334 MS2 16/22 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 517 3.60 0.00 0 26 100 2 651.33514 1301.66301 3.53 27.22 2368 2368 MS2 19/22 Linfeng_20120130_CHD1_10.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 453 3.57 0.00 0 2 100 3 701.33539 2101.99161 4.57 32.18 2922 2922 MS2 29/80 Linfeng_20120130_CHD1_1.raw High TmQNLEIELQSQLSmK Unambiguous 2 1 IPI00384444.6 M2(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 473 3.55 0.00 0 20 100 3 642.31781 1924.93888 1.74 44.10 5525 5525 MS2 28/60 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 448 3.55 0.00 0 0 100 3 701.33521 2101.99106 4.31 32.46 2656 2656 MS2 26/80 Linfeng_20120130_CHD1_2.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 3.53 0.00 0 19 25 3 685.37750 2054.11795 -3.01 40.63 4765 4765 MS2 37/72 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 510 3.50 0.00 0 22 100 2 651.33459 1301.66191 2.69 25.46 1796 1796 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 298 3.48 0.00 0 51 25 3 685.37781 2054.11887 -2.57 40.43 4898 4898 MS2 36/72 Linfeng_091311_rIgG_10.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 365 3.46 0.00 0 0 100 2 1051.49744 2101.98760 2.66 32.53 2389 2389 MS2 20/40 Linfeng_20120130_CHD1_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 601 3.44 0.00 0 30 100 2 515.30231 1029.59734 3.30 36.62 4242 4242 MS2 15/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 500 3.40 0.00 1 3 100 2 690.36975 1379.73223 3.21 36.29 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 561 3.38 0.00 0 32 100 2 515.30255 1029.59783 3.77 36.55 4228 4228 MS2 15/16 Linfeng_20120130_CHD1_10.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 431 3.38 0.00 0 4 100 3 701.33447 2101.98886 3.26 32.27 3095 3095 MS2 28/80 Linfeng_20120130_CHD1_4.raw High GQVGGDVNVEmDAAPGVDLSR Unambiguous 4 1 IPI00384444.6 M11(Oxidation) CID 1.0000 0.0000 1 1 388 3.30 0.00 0 0 100 2 1051.49927 2101.99126 4.40 32.72 3038 3038 MS2 16/40 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 3.28 0.00 1 39 100 2 532.80988 1064.61247 2.41 23.53 1641 1641 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 520 3.27 0.00 0 33 100 2 651.33496 1301.66265 3.25 27.18 2362 2362 MS2 15/22 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 3.26 0.00 1 28 100 2 532.81073 1064.61418 4.01 24.09 1617 1617 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 3.25 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.94 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 3.24 0.00 1 7 100 2 532.81036 1064.61345 3.32 23.69 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_10.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 294 3.24 0.00 0 36 25 2 713.35437 1425.70146 3.20 23.70 1757 1757 MS2 20/28 Linfeng_122411_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 492 3.23 0.00 0 41 100 2 651.33551 1301.66374 4.10 24.79 1734 1734 MS2 16/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 493 3.23 0.00 0 20 100 2 651.33466 1301.66203 2.78 27.58 1875 1875 MS2 16/22 Linfeng_20120130_CHD1_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.22 0.00 1 3 100 2 532.81079 1064.61431 4.13 23.87 1929 1929 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 554 3.22 0.00 0 11 100 2 515.30261 1029.59795 3.89 37.25 4154 4154 MS2 15/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 291 3.21 0.00 1 37 100 2 532.81067 1064.61406 3.90 23.49 1638 1638 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 3.19 0.00 1 24 100 2 532.81024 1064.61321 3.10 24.20 1628 1628 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 3.19 0.00 0 34 100 2 651.33527 1301.66326 3.72 28.21 2216 2216 MS2 15/22 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 566 3.17 0.00 1 17 100 2 690.36859 1379.72991 1.53 35.01 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.17 0.00 1 19 100 2 532.81055 1064.61382 3.67 25.40 1787 1787 MS2 13/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 3.16 0.00 0 50 100 2 651.33533 1301.66338 3.82 25.01 1757 1757 MS2 16/22 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 631 3.16 0.00 0 38 100 2 515.30200 1029.59673 2.71 35.98 4191 4191 MS2 15/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 504 3.15 0.00 0 36 100 2 651.33539 1301.66350 3.91 24.47 1695 1695 MS2 17/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 25 100 2 532.81049 1064.61370 3.55 25.51 1893 1893 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 21 100 2 532.80975 1064.61223 2.18 24.32 1728 1728 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 329 3.15 0.00 1 0 100 2 532.81036 1064.61345 3.32 25.98 1682 1682 MS2 14/16 Linfeng_20120130_CHD1_3.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.13 0.00 0 30 25 2 553.78412 1106.56096 -1.23 4.81 544 544 MS2 19/20 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.13 0.00 1 19 100 2 532.80963 1064.61199 1.95 24.50 1751 1751 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 292 3.12 0.00 1 24 100 2 532.81067 1064.61406 3.90 23.92 1679 1679 MS2 14/16 Linfeng_20120130_CHD1_5.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 257 3.11 0.00 0 41 25 2 713.35016 1425.69304 -2.71 24.90 2767 2767 MS2 19/28 Linfeng_091311_rIgG_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.11 0.00 1 0 100 2 532.81091 1064.61455 4.36 23.24 1566 1566 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 276 3.10 0.00 0 38 25 3 685.37762 2054.11832 -2.83 40.54 4848 4848 MS2 32/72 Linfeng_091311_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 324 3.10 0.00 1 20 100 2 532.81042 1064.61357 3.44 24.13 1707 1707 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ADLEmQIESLK Unambiguous 3 1 IPI00384444.6 M5(Oxidation) CID 1.0000 0.0000 1 1 546 3.09 0.00 0 23 100 2 646.82648 1292.64568 4.15 43.34 5344 5344 MS2 16/20 Linfeng_20120130_CHD1_4.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 243 3.09 0.00 0 38 25 2 713.35040 1425.69353 -2.37 24.95 2737 2737 MS2 20/28 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 3.08 0.00 1 3 100 2 532.81042 1064.61357 3.44 24.06 1655 1655 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ILTATVDNANVLLQIDNAR Unambiguous 5 1 IPI00384444.6 CID 1.0000 0.0000 1 1 277 3.08 0.00 0 16 25 3 685.37732 2054.11740 -3.28 40.41 4837 4837 MS2 36/72 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 527 3.08 0.00 0 42 100 2 651.33466 1301.66203 2.78 27.97 2354 2354 MS2 17/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 3.07 0.00 1 3 100 2 532.81097 1064.61467 4.47 24.97 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 3.07 0.00 1 10 100 2 532.80975 1064.61223 2.18 25.31 1754 1754 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.07 0.00 1 26 100 2 532.81049 1064.61370 3.55 24.02 1607 1607 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 506 3.07 0.00 0 38 100 2 651.33508 1301.66289 3.44 28.06 2194 2194 MS2 16/22 Linfeng_20120130_CHD1_1.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 300 3.06 0.00 0 38 25 2 713.35388 1425.70049 2.52 22.08 1919 1919 MS2 19/28 Linfeng_122411_rIgG_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 516 3.05 0.00 0 50 100 2 651.33508 1301.66289 3.44 29.52 2531 2531 MS2 15/22 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.05 0.00 1 26 100 2 532.81067 1064.61406 3.90 23.73 1661 1661 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.05 0.00 1 3 100 2 532.81061 1064.61394 3.78 24.30 1966 1966 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 3.04 0.00 1 4 100 2 532.81055 1064.61382 3.67 23.47 1866 1866 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.04 0.00 1 36 100 2 532.80969 1064.61211 2.06 23.61 1650 1650 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 3.04 0.00 1 7 100 2 532.81049 1064.61370 3.55 23.60 1885 1885 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 309 3.04 0.00 1 3 100 2 532.81073 1064.61418 4.01 23.95 1936 1936 MS2 14/16 Linfeng_20120130_CHD1_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 497 3.03 0.00 0 46 100 2 651.33551 1301.66374 4.10 25.14 1769 1769 MS2 16/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.03 0.00 1 9 100 2 532.81067 1064.61406 3.90 25.32 2088 2088 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 3.03 0.00 1 18 100 2 532.81061 1064.61394 3.78 24.22 1717 1717 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 489 3.03 0.00 0 34 100 2 651.33441 1301.66155 2.41 29.21 2474 2474 MS2 16/22 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 3.02 0.00 0 3 6 2 651.33167 1301.65605 -1.81 4.19 457 457 MS2 19/22 Linfeng_122411_rIgG_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 622 3.02 0.00 0 29 100 2 515.30243 1029.59758 3.54 36.62 3333 3333 MS2 15/16 Linfeng_20120130_CHD1_3.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 3.02 0.00 0 6 25 2 639.79468 1278.58208 -2.76 21.33 2269 2269 MS2 21/28 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 300 3.02 0.00 1 25 100 2 532.81085 1064.61443 4.24 23.80 1667 1667 MS2 14/16 Linfeng_20120130_CHD1_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 575 3.01 0.00 0 36 100 2 515.30249 1029.59770 3.65 36.14 3775 3775 MS2 15/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 548 3.00 0.00 0 48 100 2 651.33398 1301.66069 1.75 27.30 2210 2210 MS2 17/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.00 0.00 1 6 100 2 532.81055 1064.61382 3.67 23.43 1861 1861 MS2 14/16 Linfeng_20120130_CHD1_10.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 3.00 0.00 0 5 25 2 681.34723 1361.68718 -2.63 21.80 2277 2277 MS2 20/24 Linfeng_091311_rIgG_7.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 280 2.99 0.00 0 28 25 2 713.35303 1425.69878 1.32 23.55 2154 2154 MS2 17/28 Linfeng_122411_rIgG_5.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 2.99 0.00 0 13 25 2 681.34735 1361.68743 -2.45 21.72 2294 2294 MS2 20/24 Linfeng_091311_rIgG_6.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 395 2.99 0.00 1 5 6 3 422.89459 1266.66922 0.27 3.58 361 361 MS2 22/36 Linfeng_122411_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 346 2.98 0.00 1 13 100 2 532.81012 1064.61296 2.87 23.87 1650 1650 MS2 13/16 Linfeng_20120130_CHD1_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 2.98 0.00 0 13 4 2 651.33118 1301.65508 -2.56 4.10 471 471 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 520 2.97 0.00 0 43 100 2 651.33496 1301.66265 3.25 27.03 2032 2032 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.97 0.00 1 5 100 2 532.81055 1064.61382 3.67 23.63 1890 1890 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.96 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.16 1623 1623 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 2.96 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.39 1586 1586 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 572 2.96 0.00 0 23 100 2 515.30249 1029.59770 3.65 36.54 3460 3460 MS2 15/16 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.95 0.00 1 33 100 3 460.58240 1379.73264 3.51 35.92 3894 3894 MS2 23/40 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 574 2.95 0.00 0 20 100 2 515.30249 1029.59770 3.65 37.20 3443 3443 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 624 2.94 0.00 0 26 100 2 515.30243 1029.59758 3.54 36.25 3953 3953 MS2 15/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 340 2.94 0.00 0 18 25 2 651.33527 1301.66326 3.72 25.75 1843 1843 MS2 18/22 Linfeng_122411_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.94 0.00 1 4 100 2 532.81036 1064.61345 3.32 24.78 1581 1581 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 312 2.93 0.00 1 1 100 2 532.81091 1064.61455 4.36 23.62 1614 1614 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 538 2.93 0.00 0 21 100 2 651.33417 1301.66106 2.03 28.86 2407 2407 MS2 17/22 Linfeng_20120130_CHD1_4.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 297 2.92 0.00 0 12 25 2 610.80334 1220.59941 -0.92 3.40 311 311 MS2 17/20 Linfeng_122411_rIgG_9.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.92 0.00 0 10 25 2 681.34717 1361.68706 -2.72 21.41 2280 2280 MS2 19/24 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 2.92 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.18 1561 1561 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 516 2.91 0.00 0 64 100 2 651.33545 1301.66362 4.00 27.24 1873 1873 MS2 17/22 Linfeng_20120130_CHD1_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 582 2.91 0.00 0 25 100 2 515.30261 1029.59795 3.89 36.97 3402 3402 MS2 15/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 296 2.91 0.00 1 4 100 2 532.81085 1064.61443 4.24 23.33 1578 1578 MS2 14/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 583 2.91 0.00 0 28 100 2 515.30255 1029.59783 3.77 37.16 3436 3436 MS2 15/16 Linfeng_20120130_CHD1_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 97 2.90 0.00 0 8 25 2 586.76776 1172.52825 1.98 38.81 3521 3521 MS2 13/16 Linfeng_122411_rIgG_7.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.90 0.00 0 36 25 2 639.79510 1278.58293 -2.09 21.41 2244 2244 MS2 21/28 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 316 2.90 0.00 1 7 100 2 532.81097 1064.61467 4.47 24.70 1583 1583 MS2 13/16 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 36 100 2 532.81061 1064.61394 3.78 23.80 1579 1579 MS2 15/16 Linfeng_20120130_CHD1_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 2.90 0.00 0 33 25 2 639.79437 1278.58147 -3.24 21.52 2221 2221 MS2 21/28 Linfeng_091311_rIgG_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 512 2.89 0.00 1 42 100 3 460.58234 1379.73246 3.37 36.47 3998 3998 MS2 21/40 Linfeng_20120130_CHD1_4.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 2.89 0.00 0 27 25 2 713.35016 1425.69304 -2.71 24.66 2705 2705 MS2 19/28 Linfeng_091311_rIgG_3.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 367 2.89 0.00 1 14 23 3 422.89301 1266.66446 -3.49 24.78 2456 2456 MS2 22/36 Linfeng_091311_rIgG_1.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 255 2.88 0.00 0 42 25 2 713.34937 1425.69145 -3.82 24.61 2733 2733 MS2 18/28 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 2.88 0.00 1 3 100 2 532.81055 1064.61382 3.67 23.89 1639 1639 MS2 14/16 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.88 0.00 1 22 100 3 460.58252 1379.73301 3.77 36.04 3913 3913 MS2 22/40 Linfeng_20120130_CHD1_4.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 274 2.87 0.00 0 29 25 2 713.34979 1425.69231 -3.22 24.58 2429 2429 MS2 19/28 Linfeng_091311_rIgG_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 380 2.87 0.00 1 3 25 3 422.89343 1266.66574 -2.48 25.11 2704 2704 MS2 23/36 Linfeng_091311_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.87 0.00 1 5 100 2 532.81012 1064.61296 2.87 25.38 1759 1759 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 315 2.86 0.00 1 2 100 2 532.81122 1064.61516 4.93 25.44 1813 1813 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.86 0.00 1 4 100 2 532.81036 1064.61345 3.32 23.48 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 346 2.85 0.00 0 4 25 2 651.33386 1301.66045 1.56 25.38 2359 2359 MS2 19/22 Linfeng_122411_rIgG_6.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 360 2.85 0.00 0 9 25 2 681.34778 1361.68828 -1.82 21.55 2263 2263 MS2 19/24 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.84 0.00 0 1 25 2 681.34705 1361.68682 -2.90 21.69 2254 2254 MS2 20/24 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 331 2.83 0.00 1 1 100 2 532.81055 1064.61382 3.67 24.44 1692 1692 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 2.83 0.00 1 2 100 2 532.81061 1064.61394 3.78 23.75 1625 1625 MS2 14/16 Linfeng_20120130_CHD1_1.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 277 2.83 0.00 0 38 25 2 713.35016 1425.69304 -2.71 24.88 2700 2700 MS2 19/28 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 340 2.82 0.00 1 11 100 2 532.81012 1064.61296 2.87 25.17 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_9.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 224 2.82 0.00 0 19 100 2 586.76825 1172.52922 2.82 48.22 6467 6467 MS2 14/16 Linfeng_20120130_CHD1_4.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 101 2.81 0.00 0 10 25 2 586.76746 1172.52764 1.46 39.10 3961 3961 MS2 13/16 Linfeng_122411_rIgG_2.raw High LLEGEDAHLSSSQFSSGSQSSR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 161 2.81 0.00 0 20 25 3 770.36145 2309.06980 2.46 26.64 2354 2354 MS2 28/84 Linfeng_122411_rIgG_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 615 2.81 0.00 0 19 100 2 515.30200 1029.59673 2.71 36.95 3030 3030 MS2 15/16 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.80 0.00 1 21 100 2 532.81006 1064.61284 2.75 24.34 1640 1640 MS2 13/16 Linfeng_20120130_CHD1_4.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 381 2.79 0.00 1 5 19 3 422.89328 1266.66529 -2.84 24.87 2769 2769 MS2 20/36 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 506 2.78 0.00 0 55 100 2 651.33496 1301.66265 3.25 26.61 1960 1960 MS2 15/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 6 25 2 651.33063 1301.65398 -3.41 27.08 2999 2999 MS2 19/22 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 2.78 0.00 0 49 100 2 651.33441 1301.66155 2.41 24.79 1787 1787 MS2 13/22 Linfeng_20120130_CHD1_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 620 2.78 0.00 0 21 100 2 515.30231 1029.59734 3.30 37.17 4005 4005 MS2 15/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.78 0.00 1 18 100 2 532.80981 1064.61235 2.29 23.32 1845 1845 MS2 13/16 Linfeng_20120130_CHD1_10.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 245 2.77 0.00 0 40 25 2 713.35046 1425.69365 -2.28 24.85 2668 2668 MS2 17/28 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 20 25 2 651.33459 1301.66191 2.69 20.48 1702 1702 MS2 17/22 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 311 2.76 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.08 1551 1551 MS2 13/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 20 25 2 651.33075 1301.65422 -3.22 27.05 3018 3018 MS2 19/22 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 2.76 0.00 1 26 100 2 532.81055 1064.61382 3.67 24.38 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.75 0.00 1 25 100 2 532.81055 1064.61382 3.67 23.97 1684 1684 MS2 14/16 Linfeng_20120130_CHD1_5.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 365 2.74 0.00 0 21 25 2 681.34790 1361.68852 -1.64 21.53 2267 2267 MS2 18/24 Linfeng_091311_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.74 0.00 1 31 100 2 532.81006 1064.61284 2.75 24.29 1849 1849 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 101 2.73 0.00 0 10 25 2 586.76764 1172.52800 1.77 38.96 3923 3923 MS2 14/16 Linfeng_122411_rIgG_3.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 256 2.73 0.00 0 54 25 2 713.34998 1425.69267 -2.96 24.95 2711 2711 MS2 18/28 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.72 0.00 1 9 100 2 532.81030 1064.61333 3.21 24.75 1710 1710 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 621 2.71 0.00 0 24 100 2 515.30182 1029.59636 2.35 36.91 3019 3019 MS2 15/16 Linfeng_20120130_CHD1_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 586 2.71 0.00 1 12 100 2 690.36877 1379.73027 1.79 36.50 3449 3449 MS2 16/20 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 515 2.71 0.00 1 35 100 3 460.58221 1379.73209 3.11 36.40 3984 3984 MS2 21/40 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 651.33057 1301.65386 -3.50 26.83 2996 2996 MS2 19/22 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.69 0.00 1 7 100 2 532.81024 1064.61321 3.10 23.64 1498 1498 MS2 13/16 Linfeng_20120130_CHD1_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 502 2.69 0.00 0 31 100 2 651.32867 1301.65007 -6.41 29.18 2376 2376 MS2 16/22 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.69 0.00 1 23 100 3 460.58240 1379.73264 3.51 36.10 3924 3924 MS2 22/40 Linfeng_20120130_CHD1_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.68 0.00 1 38 100 2 532.81042 1064.61357 3.44 25.01 1914 1914 MS2 13/16 Linfeng_20120130_CHD1_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 294 2.67 0.00 1 1 100 2 532.81067 1064.61406 3.90 24.90 1590 1590 MS2 13/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.67 0.00 1 22 100 2 532.81042 1064.61357 3.44 25.54 1806 1806 MS2 13/16 Linfeng_20120130_CHD1_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 17 25 2 639.79437 1278.58147 -3.24 21.53 2231 2231 MS2 22/28 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 2.66 0.00 1 6 100 2 532.81012 1064.61296 2.87 23.57 1492 1492 MS2 14/16 Linfeng_20120130_CHD1_3.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 268 2.65 0.00 0 33 25 2 713.35028 1425.69328 -2.54 24.68 2700 2700 MS2 16/28 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 2.65 0.00 0 7 25 2 681.34723 1361.68718 -2.63 20.04 1805 1805 MS2 19/24 Linfeng_091311_rIgG_1.raw High APSTYGGGLSVSSSR Unambiguous 2 1 IPI00384444.6 CID 1.0000 0.0000 1 1 503 2.64 0.00 0 45 100 2 713.35492 1425.70256 3.97 24.00 1604 1604 MS2 16/28 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 508 2.64 0.00 0 37 100 2 651.33435 1301.66142 2.31 25.68 2134 2134 MS2 16/22 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 344 2.64 0.00 0 31 25 2 651.33484 1301.66240 3.07 25.70 1945 1945 MS2 18/22 Linfeng_122411_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.63 0.00 1 33 100 2 532.80994 1064.61260 2.52 23.82 1815 1815 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 79 2.63 0.00 0 9 25 2 586.76508 1172.52287 -2.60 40.31 4725 4725 MS2 14/16 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 464 2.62 0.00 0 35 100 2 651.32947 1301.65166 -5.19 29.33 2626 2626 MS2 14/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 2.62 0.00 1 8 100 2 532.81030 1064.61333 3.21 25.05 1733 1733 MS2 13/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 443 2.60 0.00 0 31 100 2 651.32819 1301.64910 -7.16 29.12 2366 2366 MS2 15/22 Linfeng_20120130_CHD1_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 468 2.60 0.00 1 4 100 2 633.84033 1266.67339 3.56 24.71 1687 1687 MS2 15/18 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 301 2.60 0.00 0 5 25 2 651.33014 1301.65300 -4.16 27.05 2997 2997 MS2 19/22 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.59 0.00 1 2 100 2 532.81055 1064.61382 3.67 25.71 1688 1688 MS2 13/16 Linfeng_20120130_CHD1_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.59 0.00 0 11 25 2 610.80072 1220.59416 -5.22 25.93 2871 2871 MS2 15/20 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 320 2.59 0.00 1 24 100 2 532.81085 1064.61443 4.24 24.44 1862 1862 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.59 0.00 1 9 100 2 532.81049 1064.61370 3.55 23.74 1505 1505 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 303 2.59 0.00 1 7 100 2 532.81079 1064.61431 4.13 23.75 1912 1912 MS2 14/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.58 0.00 1 30 100 3 460.58249 1379.73291 3.71 36.00 3907 3907 MS2 21/40 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 394 2.57 0.00 0 22 25 2 651.33234 1301.65740 -0.78 25.57 2427 2427 MS2 18/22 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.57 0.00 1 37 100 2 532.81024 1064.61321 3.10 24.97 1910 1910 MS2 13/16 Linfeng_20120130_CHD1_8.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 2.57 0.00 0 9 25 2 639.79535 1278.58342 -1.71 21.35 2244 2244 MS2 21/28 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 2.57 0.00 0 19 25 2 639.79492 1278.58257 -2.38 21.63 2282 2282 MS2 20/28 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 617 2.56 0.00 0 31 100 2 515.30212 1029.59697 2.94 36.77 2999 2999 MS2 14/16 Linfeng_20120130_CHD1_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 378 2.56 0.00 0 26 25 2 651.33429 1301.66130 2.22 25.71 2229 2229 MS2 18/22 Linfeng_122411_rIgG_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 608 2.56 0.00 0 36 100 2 515.30212 1029.59697 2.94 36.71 2988 2988 MS2 15/16 Linfeng_20120130_CHD1_7.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 380 2.56 0.00 1 32 25 3 422.89383 1266.66693 -1.54 24.86 2733 2733 MS2 22/36 Linfeng_091311_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.55 0.00 1 22 100 2 532.81012 1064.61296 2.87 25.25 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 303 2.55 0.00 0 3 25 2 651.33014 1301.65300 -4.16 26.78 3033 3033 MS2 19/22 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 339 2.54 0.00 1 28 100 2 532.81061 1064.61394 3.78 25.65 1820 1820 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 2.54 0.00 0 10 12 2 651.33173 1301.65618 -1.72 4.31 474 474 MS2 19/22 Linfeng_122411_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 441 2.54 0.00 0 44 100 2 651.32831 1301.64934 -6.97 29.37 2405 2405 MS2 15/22 Linfeng_20120130_CHD1_1.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 383 2.52 0.00 1 6 25 3 422.89331 1266.66538 -2.77 25.17 2742 2742 MS2 23/36 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.52 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.01 1827 1827 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 364 2.52 0.00 0 23 25 2 651.33282 1301.65837 -0.03 25.78 2164 2164 MS2 17/22 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 385 2.51 0.00 1 17 25 3 422.89352 1266.66602 -2.26 25.18 2768 2768 MS2 21/36 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 322 2.51 0.00 1 44 100 2 593.35254 1185.69780 2.31 41.52 4977 4977 MS2 14/18 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.50 0.00 1 42 100 2 532.81000 1064.61272 2.64 23.56 1795 1795 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 293 2.50 0.00 0 25 25 2 651.33051 1301.65373 -3.59 26.95 2953 2953 MS2 19/22 Linfeng_091311_rIgG_5.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 575 2.49 0.00 1 45 100 3 460.58267 1379.73346 4.10 36.69 4044 4044 MS2 22/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.49 0.00 1 29 100 2 532.81012 1064.61296 2.87 24.73 1888 1888 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 2.48 0.00 1 29 100 2 532.81079 1064.61431 4.13 24.41 1859 1859 MS2 13/16 Linfeng_20120130_CHD1_8.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 515 2.47 0.00 0 25 100 2 610.80280 1220.59831 3.50 31.89 3010 3010 MS2 19/20 Linfeng_20120130_CHD1_4.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.45 0.00 0 19 25 2 610.80090 1220.59453 -4.92 25.92 2878 2878 MS2 15/20 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 78 2.43 0.00 0 24 25 2 586.76495 1172.52263 -2.81 40.14 4737 4737 MS2 13/16 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 308 2.42 0.00 0 15 25 2 651.33057 1301.65386 -3.50 26.92 3105 3105 MS2 19/22 Linfeng_091311_rIgG_10.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 502 2.42 0.00 0 12 100 2 545.77045 1090.53362 2.38 20.76 1347 1347 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 303 2.42 0.00 0 23 25 2 651.33026 1301.65325 -3.97 26.68 2984 2984 MS2 19/22 Linfeng_091311_rIgG_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 67 2.42 0.00 0 9 25 2 586.76532 1172.52336 -2.18 40.23 4727 4727 MS2 13/16 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 309 2.41 0.00 0 5 25 2 610.80035 1220.59343 -5.82 26.19 2904 2904 MS2 17/20 Linfeng_091311_rIgG_6.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 72 2.41 0.00 0 11 25 2 586.76508 1172.52287 -2.60 40.21 4697 4697 MS2 13/16 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 517 2.40 0.00 0 50 100 2 651.33539 1301.66350 3.91 27.47 1845 1845 MS2 16/22 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 515 2.39 0.00 0 48 100 2 610.80255 1220.59783 3.10 32.31 3289 3289 MS2 18/20 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 463 2.38 0.00 1 13 100 2 633.84082 1266.67436 4.33 25.27 1786 1786 MS2 14/18 Linfeng_20120130_CHD1_1.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 291 2.37 0.00 0 58 25 2 610.80304 1220.59880 -1.42 25.77 2584 2584 MS2 16/20 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 77 2.36 0.00 0 13 25 2 586.76544 1172.52361 -1.97 40.06 4794 4794 MS2 13/16 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.35 0.00 1 27 100 2 532.81036 1064.61345 3.32 24.10 1833 1833 MS2 14/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 407 2.33 0.00 0 31 100 2 553.76770 1106.52812 1.98 13.15 884 884 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ADLEmQIESLK Unambiguous 3 1 IPI00384444.6 M5(Oxidation) CID 1.0000 0.0000 1 1 529 2.32 0.00 0 42 100 2 646.82574 1292.64421 3.01 42.20 5107 5107 MS2 12/20 Linfeng_20120130_CHD1_4.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 76 2.32 0.00 0 54 25 2 586.76477 1172.52226 -3.12 40.21 4714 4714 MS2 13/16 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 70 25 2 651.32861 1301.64995 -6.50 27.21 3055 3055 MS2 15/22 Linfeng_091311_rIgG_3.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 68 2.31 0.00 0 21 25 2 586.76538 1172.52349 -2.08 40.03 4728 4728 MS2 13/16 Linfeng_091311_rIgG_3.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 478 2.31 0.00 1 3 100 2 633.84033 1266.67339 3.56 25.74 1836 1836 MS2 14/18 Linfeng_20120130_CHD1_4.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 445 2.31 0.00 0 13 100 2 553.76831 1106.52934 3.08 13.00 858 858 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 96 2.30 0.00 0 10 18 2 586.76636 1172.52544 -0.41 39.13 4290 4290 MS2 14/16 Linfeng_122411_rIgG_5.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.29 0.00 0 24 25 2 639.79449 1278.58171 -3.04 21.68 2260 2260 MS2 20/28 Linfeng_091311_rIgG_7.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.28 0.00 1 32 100 2 532.81030 1064.61333 3.21 24.69 1885 1885 MS2 11/16 Linfeng_20120130_CHD1_8.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 452 2.26 0.00 1 7 100 2 633.83972 1266.67217 2.59 26.32 1930 1930 MS2 15/18 Linfeng_20120130_CHD1_4.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 480 2.26 0.00 1 22 100 2 633.83929 1266.67131 1.92 23.71 1569 1569 MS2 12/18 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.25 0.00 0 13 25 2 610.80060 1220.59392 -5.42 25.83 2902 2902 MS2 17/20 Linfeng_091311_rIgG_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 282 2.25 0.00 0 35 25 2 610.80206 1220.59685 -3.02 26.01 2854 2854 MS2 16/20 Linfeng_091311_rIgG_9.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 465 2.25 0.00 1 29 100 2 633.83923 1266.67119 1.82 24.33 1730 1730 MS2 15/18 Linfeng_20120130_CHD1_5.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 506 2.25 0.00 0 11 100 2 545.77045 1090.53362 2.38 18.30 1178 1178 MS2 15/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 472 2.24 0.00 1 12 100 2 633.83972 1266.67217 2.59 26.10 1894 1894 MS2 14/18 Linfeng_20120130_CHD1_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.24 0.00 0 27 25 2 639.79425 1278.58122 -3.43 21.61 2318 2318 MS2 21/28 Linfeng_091311_rIgG_8.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.24 0.00 0 41 25 2 610.80115 1220.59502 -4.52 26.18 2875 2875 MS2 16/20 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 325 2.22 0.00 1 4 100 2 532.81006 1064.61284 2.75 23.69 1506 1506 MS2 12/16 Linfeng_20120130_CHD1_2.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 482 2.22 0.00 1 13 100 2 633.83948 1266.67168 2.21 23.61 1559 1559 MS2 11/18 Linfeng_20120130_CHD1_4.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 489 2.22 0.00 1 28 100 2 633.84009 1266.67290 3.17 25.44 1657 1657 MS2 11/18 Linfeng_20120130_CHD1_2.raw High TKYETELNLR Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 496 2.21 0.00 1 29 100 2 633.83997 1266.67266 2.98 25.13 2067 2067 MS2 13/18 Linfeng_20120130_CHD1_10.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.20 0.00 0 27 25 2 553.78314 1106.55901 -3.00 23.20 2467 2467 MS2 19/20 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 482 2.19 0.00 0 35 100 2 610.80316 1220.59905 4.10 31.95 2877 2877 MS2 17/20 Linfeng_20120130_CHD1_1.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 472 2.18 0.00 0 51 100 2 610.80322 1220.59917 4.20 32.43 2651 2651 MS2 15/20 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.17 0.00 1 14 100 2 532.80988 1064.61247 2.41 23.71 1639 1639 MS2 12/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 2.16 0.00 1 37 100 2 532.81018 1064.61308 2.98 24.87 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DAEEWFFTK Unambiguous 4 1 IPI00384444.6 CID 1.0000 0.0000 1 1 103 2.16 0.00 0 26 25 2 586.76752 1172.52776 1.57 39.36 3911 3911 MS2 13/16 Linfeng_122411_rIgG_8.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.15 0.00 0 48 25 2 639.79504 1278.58281 -2.19 19.47 1727 1727 MS2 20/28 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High NHEEEMNALR Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 55 2.08 0.00 0 7 25 2 621.77930 1242.55132 -1.53 20.04 2019 2019 MS2 13/18 Linfeng_091311_rIgG_5.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.08 0.00 0 57 25 2 610.80389 1220.60051 -0.02 24.24 2203 2203 MS2 15/20 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High LASYLDK Unambiguous 22 5 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00019359.4 CID 1.0000 0.0000 1 1 244 2.01 0.00 0 28 100 2 405.22485 809.44243 2.54 21.37 1394 1394 MS2 10/12 Linfeng_20120130_CHD1_4.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw IPI00018278.3 Histone H2A.V 53.91 9 4 6 104 41.99 20.31 3 19 82.62 20.31 4 35 179.67 53.91 5 50 128 13.5 10.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 276 7.28 0.00 0 1 2 3 965.84851 2895.53098 -1.43 48.65 6311 6311 MS2 38/112 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 257 6.79 0.00 0 1 2 3 965.85168 2895.54050 1.86 55.48 7113 7113 MS2 40/112 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 264 6.63 0.00 0 5 31 3 965.85107 2895.53867 1.23 55.45 7463 7463 MS2 35/112 Linfeng_20120130_CHD1_1.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 283 6.37 0.00 0 0 13 3 965.84888 2895.53208 -1.05 48.63 5772 5772 MS2 39/112 Linfeng_20120130_CHD1_3.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 261 6.22 0.00 0 1 17 3 965.85144 2895.53977 1.61 55.48 6561 6561 MS2 37/112 Linfeng_20120130_CHD1_3.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 262 5.79 0.00 0 0 100 3 965.85016 2895.53592 0.28 49.06 6410 6410 MS2 33/112 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 280 5.45 0.00 0 4 100 3 965.84790 2895.52915 -2.06 48.99 6394 6394 MS2 35/112 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 214 5.10 0.00 0 0 11 2 1448.26880 2895.53032 -1.65 48.65 6312 6312 MS2 24/56 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 189 5.06 0.00 0 1 11 2 1448.27356 2895.53984 1.63 55.49 7474 7474 MS2 24/56 Linfeng_20120130_CHD1_1.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 188 4.89 0.00 0 0 32 2 1448.27405 2895.54082 1.97 55.49 7117 7117 MS2 26/56 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 232 4.87 0.00 0 13 100 3 965.85455 2895.54911 4.83 55.80 7196 7196 MS2 29/112 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 259 4.58 0.00 0 7 100 3 965.85120 2895.53904 1.36 48.74 5799 5799 MS2 30/112 Linfeng_20120130_CHD1_3.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 204 4.58 0.00 0 7 100 2 1448.27026 2895.53325 -0.64 48.71 6328 6328 MS2 23/56 Linfeng_20120130_CHD1_2.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 256 4.52 0.00 0 11 100 3 965.85223 2895.54215 2.43 55.57 6586 6586 MS2 35/112 Linfeng_20120130_CHD1_3.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 265 4.37 0.00 0 0 100 3 965.85107 2895.53867 1.23 56.48 7696 7696 MS2 26/112 Linfeng_20120130_CHD1_1.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 275 4.11 0.00 0 13 100 2 685.90088 1370.79448 3.01 32.11 3243 3243 MS2 19/26 Linfeng_20120130_CHD1_10.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 276 3.90 0.00 0 32 28 4 724.63800 2895.53017 -1.71 48.66 6316 6316 MS2 37/168 Linfeng_20120130_CHD1_2.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 262 3.66 0.00 0 9 100 2 685.90118 1370.79509 3.45 32.58 3350 3350 MS2 19/26 Linfeng_20120130_CHD1_10.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 241 3.56 0.00 0 25 100 3 965.85321 2895.54508 3.44 55.99 7242 7242 MS2 24/112 Linfeng_20120130_CHD1_2.raw High HLQLAIRGDEELDSLIK Unambiguous 8 1 IPI00018278.3 CID 1.0000 0.0000 1 1 262 3.56 0.00 1 3 23 3 650.69330 1950.06534 -0.11 36.04 3430 3430 MS2 29/64 Linfeng_122411_rIgG_10.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 277 3.55 0.00 0 43 100 2 685.90094 1370.79460 3.09 32.79 3398 3398 MS2 19/26 Linfeng_20120130_CHD1_10.raw High HLQLAIRGDEELDSLIK Unambiguous 8 1 IPI00018278.3 CID 1.0000 0.0000 1 1 254 3.55 0.00 1 16 25 4 488.27234 1950.06753 1.01 35.95 3419 3419 MS2 38/96 Linfeng_122411_rIgG_10.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 261 3.48 0.00 0 0 100 3 965.85150 2895.53995 1.67 48.68 6606 6606 MS2 26/112 Linfeng_20120130_CHD1_4.raw High VGATAAVYSAAILEYLTAEVLELAGNASK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 231 3.26 0.00 0 20 100 3 965.85406 2895.54764 4.33 55.92 7225 7225 MS2 27/112 Linfeng_20120130_CHD1_2.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 595 3.23 0.00 0 11 100 2 559.78400 1118.56072 2.77 38.13 4528 4528 MS2 15/18 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 871 3.11 0.00 0 47 100 2 472.77133 944.53539 4.35 37.30 4377 4377 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 3.11 0.00 0 12 66 2 472.77118 944.53508 4.02 36.32 4183 4183 MS2 14/16 Linfeng_20120130_CHD1_10.raw High ATIAGGGVIPHIHK Unambiguous 6 1 IPI00018278.3 CID 1.0000 0.0000 1 1 267 2.99 0.00 0 20 100 2 685.90033 1370.79338 2.20 31.11 3023 3023 MS2 18/26 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 877 2.90 0.00 0 10 3 2 472.77045 944.53362 2.47 35.32 3965 3965 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 857 2.81 0.00 0 53 41 2 472.77081 944.53435 3.25 46.98 6346 6346 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 885 2.76 0.00 0 5 6 2 472.77081 944.53435 3.25 34.30 3728 3728 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 887 2.74 0.00 0 36 100 2 472.77124 944.53520 4.15 33.30 3513 3513 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 891 2.73 0.00 0 42 100 2 472.77045 944.53362 2.47 33.90 3543 3543 MS2 13/16 Linfeng_20120130_CHD1_8.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 596 2.67 0.00 0 18 100 2 559.78485 1118.56243 4.30 37.13 4346 4346 MS2 15/18 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 2.65 0.00 0 49 100 2 472.77148 944.53569 4.67 37.25 4369 4369 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.58 0.00 0 5 38 2 425.76825 850.52922 4.05 32.27 3280 3280 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 864 2.55 0.00 0 40 27 2 472.77054 944.53380 2.67 46.89 6316 6316 MS2 13/16 Linfeng_20120130_CHD1_10.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 402 2.55 0.00 0 2 6 2 559.78162 1118.55596 -1.49 31.90 2895 2895 MS2 15/18 Linfeng_122411_rIgG_10.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 603 2.55 0.00 0 37 100 2 559.78467 1118.56206 3.97 37.51 4319 4319 MS2 13/18 Linfeng_20120130_CHD1_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 888 2.49 0.00 0 34 100 2 472.77069 944.53411 2.99 37.41 4398 4398 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.46 0.00 0 43 100 2 472.77115 944.53502 3.96 33.21 3493 3493 MS2 12/16 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.46 0.00 0 8 100 2 425.76828 850.52928 4.12 33.29 3510 3510 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 474 2.44 0.00 0 10 5 2 559.78101 1118.55474 -2.58 33.43 3991 3991 MS2 15/18 Linfeng_091311_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.43 0.00 0 4 57 2 425.76822 850.52916 3.97 24.14 1953 1953 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.42 0.00 0 5 100 2 425.76797 850.52867 3.40 27.20 2365 2365 MS2 12/12 Linfeng_20120130_CHD1_10.raw High GDEELDSLIK Unambiguous 9 1 IPI00018278.3 CID 1.0000 0.0000 1 1 470 2.38 0.00 0 13 25 2 559.78302 1118.55876 1.02 32.20 2992 2992 MS2 15/18 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.37 0.00 0 53 100 2 472.77075 944.53423 3.12 34.06 2886 2886 MS2 13/16 Linfeng_20120130_CHD1_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 867 2.35 0.00 0 40 100 2 472.76999 944.53270 1.50 34.07 3581 3581 MS2 12/16 Linfeng_20120130_CHD1_8.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 53 2.34 0.00 0 3 100 2 425.76758 850.52788 2.47 31.25 3052 3052 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 60 2.27 0.00 0 5 100 2 425.76846 850.52965 4.55 25.15 2069 2069 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.27 0.00 0 26 100 2 425.76752 850.52776 2.32 34.95 3877 3877 MS2 11/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 61 2.17 0.00 0 3 100 2 425.76877 850.53026 5.27 28.21 2528 2528 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 49 2.16 0.00 0 7 100 2 425.76776 850.52825 2.90 26.18 2217 2217 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.08 0.00 0 7 100 2 425.76825 850.52922 4.05 34.30 3729 3729 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 62 2.01 0.00 0 20 100 2 425.76801 850.52873 3.47 23.12 1827 1827 MS2 11/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00219037.5 Histone H2A.x 52.45 3 1 5 123 67.71 27.27 3 25 150.86 52.45 5 54 170.34 31.47 3 44 143 15.1 10.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 193 6.57 0.00 0 0 29 3 972.53369 2915.58652 -0.45 48.90 6851 6851 MS2 38/112 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 184 6.54 0.00 0 1 21 3 972.53473 2915.58963 0.62 48.88 5622 5622 MS2 38/112 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 197 6.35 0.00 0 10 68 3 972.53247 2915.58286 -1.71 49.16 6962 6962 MS2 40/112 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 6.11 0.00 0 0 84 3 972.53345 2915.58579 -0.70 48.93 6934 6934 MS2 38/112 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 153 6.03 0.00 0 0 100 2 1458.29651 2915.58574 -0.72 48.89 6849 6849 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 153 5.91 0.00 0 0 100 2 1458.29980 2915.59233 1.54 49.10 6890 6890 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 163 5.78 0.00 0 75 100 2 1458.29565 2915.58403 -1.30 48.88 5623 5623 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 111 5.62 0.00 0 3 25 3 972.53668 2915.59549 2.63 56.94 4866 4866 MS2 37/112 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 155 5.55 0.00 0 0 94 2 1458.29504 2915.58281 -1.72 48.95 6936 6936 MS2 26/56 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 152 5.53 0.00 0 0 76 2 1458.29810 2915.58891 0.37 48.92 6855 6855 MS2 26/56 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 200 5.48 0.00 0 8 100 3 972.53320 2915.58506 -0.95 49.33 5703 5703 MS2 40/112 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 157 5.38 0.00 0 0 100 2 1458.29468 2915.58208 -1.97 49.22 5684 5684 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 149 5.37 0.00 0 0 100 2 1458.29883 2915.59038 0.87 49.13 5670 5670 MS2 26/56 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 150 5.36 0.00 0 0 100 2 1458.29626 2915.58525 -0.88 48.99 6942 6942 MS2 26/56 Linfeng_20120130_CHD1_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 187 5.29 0.00 0 17 100 4 729.65271 2915.58901 0.40 48.94 6861 6861 MS2 43/168 Linfeng_20120130_CHD1_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 110 5.22 0.00 0 11 25 4 729.65460 2915.59658 3.00 56.95 4867 4867 MS2 53/168 Linfeng_122411_rIgG_1.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 181 5.21 0.00 0 0 100 3 972.53534 2915.59146 1.25 49.53 5731 5731 MS2 35/112 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 5.12 0.00 0 7 87 4 729.65198 2915.58608 -0.60 48.91 5628 5628 MS2 47/168 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 193 5.05 0.00 0 24 100 3 972.53363 2915.58634 -0.51 49.04 5468 5468 MS2 34/112 Linfeng_20120130_CHD1_7.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 118 4.94 0.00 0 29 25 4 729.65344 2915.59194 1.41 57.26 6002 6002 MS2 44/168 Linfeng_122411_rIgG_10.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 191 4.92 0.00 0 12 99 4 729.65228 2915.58730 -0.18 48.96 6865 6865 MS2 44/168 Linfeng_20120130_CHD1_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 4.88 0.00 0 11 25 4 568.59967 2271.37685 -1.38 49.14 6001 6001 MS2 49/132 Linfeng_091311_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 9 4.84 0.00 0 12 25 3 757.80029 2271.38633 2.79 47.54 4785 4785 MS2 36/88 Linfeng_122411_rIgG_9.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 4.69 0.00 0 16 25 3 757.79810 2271.37973 -0.11 48.96 5979 5979 MS2 43/88 Linfeng_091311_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 4.63 0.00 0 39 25 3 757.79755 2271.37809 -0.84 49.25 5956 5956 MS2 39/88 Linfeng_091311_rIgG_8.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 201 4.58 0.00 0 28 100 3 972.53320 2915.58506 -0.95 49.01 5464 5464 MS2 33/112 Linfeng_20120130_CHD1_7.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 117 4.37 0.00 0 17 25 4 729.65350 2915.59218 1.49 57.24 5691 5691 MS2 47/168 Linfeng_122411_rIgG_7.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 4.16 0.00 0 26 25 3 757.79810 2271.37973 -0.11 50.01 6111 6111 MS2 41/88 Linfeng_091311_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 4.15 0.00 0 47 25 3 757.79834 2271.38047 0.21 49.17 5834 5834 MS2 38/88 Linfeng_091311_rIgG_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 187 3.98 0.00 0 5 100 4 729.65265 2915.58877 0.32 49.15 5675 5675 MS2 40/168 Linfeng_20120130_CHD1_9.raw High VGAGAPVYLAAVLEYLTAEILELAGNAAR Unambiguous 12 2 IPI00026272.2;IPI00219037.5 CID 1.0000 0.0000 1 1 117 3.78 0.00 0 13 25 3 972.53644 2915.59476 2.38 57.25 5692 5692 MS2 31/112 Linfeng_122411_rIgG_7.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 282 3.69 0.00 1 5 4 2 846.95844 1692.90959 3.99 3.11 277 277 MS2 20/26 Linfeng_122411_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 7 3.61 0.00 0 26 25 4 568.60199 2271.38613 2.70 47.72 4925 4925 MS2 35/132 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 3.56 0.00 1 18 25 3 564.97296 1692.90433 0.89 25.58 2051 2051 MS2 23/52 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 307 3.55 0.00 1 6 25 2 846.95795 1692.90862 3.42 24.71 1945 1945 MS2 21/26 Linfeng_122411_rIgG_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 9 3.46 0.00 0 12 25 3 757.80035 2271.38651 2.87 47.50 4897 4897 MS2 37/88 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 3.17 0.00 1 5 1 3 564.97400 1692.90744 2.72 3.08 272 272 MS2 24/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 871 3.11 0.00 0 47 100 2 472.77133 944.53539 4.35 37.30 4377 4377 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 3.11 0.00 0 12 66 2 472.77118 944.53508 4.02 36.32 4183 4183 MS2 14/16 Linfeng_20120130_CHD1_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 388 3.07 0.00 1 18 25 4 423.98187 1692.90566 1.67 24.37 2220 2220 MS2 30/78 Linfeng_122411_rIgG_6.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 7 2.95 0.00 0 37 25 2 1136.19177 2271.37627 -1.64 49.06 5991 5991 MS2 20/44 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 366 2.94 0.00 1 12 25 3 564.97351 1692.90598 1.86 24.93 2055 2055 MS2 24/52 Linfeng_122411_rIgG_8.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 341 2.92 0.00 1 33 25 3 564.97455 1692.90909 3.70 24.90 1901 1901 MS2 20/52 Linfeng_122411_rIgG_9.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 367 2.91 0.00 1 29 25 4 423.98151 1692.90420 0.81 25.70 2067 2067 MS2 31/78 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 877 2.90 0.00 0 10 3 2 472.77045 944.53362 2.47 35.32 3965 3965 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 6 2.84 0.00 0 0 25 2 1136.19812 2271.38896 3.95 47.59 4908 4908 MS2 19/44 Linfeng_122411_rIgG_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 393 2.82 0.00 1 9 8 4 423.98175 1692.90517 1.38 3.27 290 290 MS2 24/78 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 857 2.81 0.00 0 53 41 2 472.77081 944.53435 3.25 46.98 6346 6346 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 368 2.81 0.00 1 27 25 4 423.98245 1692.90798 3.04 24.85 2046 2046 MS2 28/78 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.78 0.00 0 36 25 2 472.76913 944.53099 -0.31 29.60 2978 2978 MS2 14/16 Linfeng_122411_rIgG_5.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 885 2.76 0.00 0 5 6 2 472.77081 944.53435 3.25 34.30 3728 3728 MS2 14/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 887 2.74 0.00 0 36 100 2 472.77124 944.53520 4.15 33.30 3513 3513 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 891 2.73 0.00 0 42 100 2 472.77045 944.53362 2.47 33.90 3543 3543 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 8 2.70 0.00 0 70 25 3 757.79810 2271.37973 -0.11 51.24 6268 6268 MS2 26/88 Linfeng_091311_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 365 2.66 0.00 1 29 25 3 564.97375 1692.90671 2.29 26.63 2189 2189 MS2 20/52 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 883 2.65 0.00 0 49 100 2 472.77148 944.53569 4.67 37.25 4369 4369 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 531 2.63 0.00 0 27 10 2 472.76907 944.53087 -0.44 30.43 2700 2700 MS2 14/16 Linfeng_122411_rIgG_10.raw High HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 309 2.61 0.00 1 40 25 2 846.95709 1692.90691 2.41 26.01 2108 2108 MS2 14/26 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.58 0.00 0 5 38 2 425.76825 850.52922 4.05 32.27 3280 3280 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.58 0.00 0 4 1 2 425.76654 850.52580 0.03 3.13 268 268 MS2 12/12 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 864 2.55 0.00 0 40 27 2 472.77054 944.53380 2.67 46.89 6316 6316 MS2 13/16 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 737 2.53 0.00 0 37 25 2 472.77014 944.53301 1.83 37.58 3627 3627 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 758 2.52 0.00 0 4 11 2 472.76987 944.53246 1.25 29.46 2640 2640 MS2 14/16 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 496 2.50 0.00 0 18 25 2 472.76755 944.52782 -3.67 31.67 3382 3382 MS2 14/16 Linfeng_091311_rIgG_1.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 134 2.49 0.00 0 4 5 2 425.76492 850.52257 -3.78 24.69 2792 2792 MS2 12/12 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 888 2.49 0.00 0 34 100 2 472.77069 944.53411 2.99 37.41 4398 4398 MS2 13/16 Linfeng_20120130_CHD1_10.raw Medium HLQLAIRNDEELNK Unambiguous 14 3 IPI00026272.2;IPI00219037.5;IPI00216457.7 CID 1.0000 0.0000 1 1 362 2.48 0.00 1 6 4 3 564.97266 1692.90342 0.35 3.23 284 284 MS2 18/52 Linfeng_122411_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.46 0.00 0 43 100 2 472.77115 944.53502 3.96 33.21 3493 3493 MS2 12/16 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.46 0.00 0 8 100 2 425.76828 850.52928 4.12 33.29 3510 3510 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 536 2.45 0.00 0 3 5 2 472.76926 944.53124 -0.05 3.53 338 338 MS2 14/16 Linfeng_122411_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.43 0.00 0 4 57 2 425.76822 850.52916 3.97 24.14 1953 1953 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 59 2.42 0.00 0 5 100 2 425.76797 850.52867 3.40 27.20 2365 2365 MS2 12/12 Linfeng_20120130_CHD1_10.raw High LLGGVTIAQGGVLPNIQAVLLPK Unambiguous 3 1 IPI00219037.5 CID 1.0000 0.0000 1 1 7 2.40 0.00 0 0 25 2 1136.19849 2271.38970 4.27 47.76 4813 4813 MS2 14/44 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 886 2.37 0.00 0 53 100 2 472.77075 944.53423 3.12 34.06 2886 2886 MS2 13/16 Linfeng_20120130_CHD1_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 792 2.37 0.00 0 40 25 2 472.77039 944.53349 2.34 41.91 4183 4183 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 790 2.36 0.00 0 23 25 2 472.77063 944.53398 2.86 52.48 5501 5501 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 500 2.35 0.00 0 7 19 2 472.76776 944.52825 -3.21 31.68 3684 3684 MS2 14/16 Linfeng_091311_rIgG_8.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 867 2.35 0.00 0 40 100 2 472.76999 944.53270 1.50 34.07 3581 3581 MS2 12/16 Linfeng_20120130_CHD1_8.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 53 2.34 0.00 0 3 100 2 425.76758 850.52788 2.47 31.25 3052 3052 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 776 2.33 0.00 0 36 25 2 472.77051 944.53374 2.60 49.46 5142 5142 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 130 2.30 0.00 0 7 22 2 425.76508 850.52287 -3.42 24.52 2650 2650 MS2 12/12 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.29 0.00 0 11 25 2 425.76517 850.52306 -3.20 24.34 2693 2693 MS2 12/12 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 814 2.29 0.00 0 31 25 2 472.77048 944.53368 2.54 50.46 5265 5265 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 808 2.28 0.00 0 23 25 2 472.77063 944.53398 2.86 54.50 5716 5716 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 815 2.28 0.00 0 26 25 2 472.77017 944.53307 1.89 44.97 4574 4574 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 60 2.27 0.00 0 5 100 2 425.76846 850.52965 4.55 25.15 2069 2069 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.27 0.00 0 26 100 2 425.76752 850.52776 2.32 34.95 3877 3877 MS2 11/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 51 2.25 0.00 0 31 25 2 425.76712 850.52696 1.39 23.90 1853 1853 MS2 11/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 733 2.25 0.00 0 24 25 2 472.77014 944.53301 1.83 42.91 4311 4311 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 767 2.24 0.00 0 20 25 2 472.76981 944.53234 1.12 43.90 4439 4439 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 540 2.24 0.00 0 6 1 2 472.76941 944.53154 0.28 29.36 2557 2557 MS2 14/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 757 2.24 0.00 0 7 25 2 472.77002 944.53276 1.57 30.25 3006 3006 MS2 14/16 Linfeng_122411_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 44 2.23 0.00 0 11 12 2 425.76517 850.52306 -3.20 24.19 2375 2375 MS2 12/12 Linfeng_091311_rIgG_1.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 784 2.22 0.00 0 20 25 2 472.77057 944.53386 2.73 51.48 5383 5383 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 816 2.20 0.00 0 11 25 2 472.77029 944.53331 2.15 28.79 2394 2394 MS2 14/16 Linfeng_122411_rIgG_9.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 809 2.20 0.00 0 44 25 2 472.77023 944.53319 2.02 29.88 2900 2900 MS2 14/16 Linfeng_122411_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 760 2.20 0.00 0 22 25 2 472.76987 944.53246 1.25 29.92 2792 2792 MS2 14/16 Linfeng_122411_rIgG_2.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.18 0.00 0 17 25 2 425.76553 850.52379 -2.34 24.36 2656 2656 MS2 12/12 Linfeng_091311_rIgG_4.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 48 2.17 0.00 0 17 25 2 425.76715 850.52703 1.46 27.61 2319 2319 MS2 12/12 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 61 2.17 0.00 0 3 100 2 425.76877 850.53026 5.27 28.21 2528 2528 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 43 2.16 0.00 0 10 0 2 425.76752 850.52776 2.32 3.05 267 267 MS2 12/12 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.16 0.00 0 13 25 2 472.77008 944.53288 1.70 29.91 2759 2759 MS2 14/16 Linfeng_122411_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 598 2.16 0.00 0 5 25 2 472.76819 944.52910 -2.31 31.73 3624 3624 MS2 14/16 Linfeng_091311_rIgG_9.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 49 2.16 0.00 0 7 100 2 425.76776 850.52825 2.90 26.18 2217 2217 MS2 12/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 487 2.15 0.00 0 7 25 2 472.76788 944.52849 -2.96 31.81 3640 3640 MS2 14/16 Linfeng_091311_rIgG_7.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 468 2.15 0.00 0 14 25 2 472.76767 944.52806 -3.41 31.74 3641 3641 MS2 13/16 Linfeng_091311_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 615 2.15 0.00 0 13 25 2 472.76828 944.52928 -2.12 31.70 3650 3650 MS2 14/16 Linfeng_091311_rIgG_4.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 508 2.15 0.00 0 20 25 2 472.76773 944.52818 -3.28 31.42 3724 3724 MS2 13/16 Linfeng_091311_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 503 2.15 0.00 0 17 25 2 472.76807 944.52886 -2.57 31.48 3630 3630 MS2 14/16 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 720 2.15 0.00 0 22 25 2 472.77005 944.53282 1.63 40.59 4012 4012 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 801 2.14 0.00 0 25 25 2 472.77026 944.53325 2.09 46.03 4709 4709 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 741 2.12 0.00 0 42 25 2 472.77014 944.53301 1.83 28.37 2421 2421 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.10 0.00 0 27 25 2 425.76520 850.52312 -3.13 24.34 2660 2660 MS2 12/12 Linfeng_091311_rIgG_3.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 771 2.10 0.00 0 35 25 2 472.76993 944.53258 1.37 35.16 3318 3318 MS2 13/16 Linfeng_122411_rIgG_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 46 2.09 0.00 0 23 21 2 425.76553 850.52379 -2.34 24.61 2689 2689 MS2 12/12 Linfeng_091311_rIgG_6.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 58 2.08 0.00 0 7 100 2 425.76825 850.52922 4.05 34.30 3729 3729 MS2 12/12 Linfeng_20120130_CHD1_10.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 45 2.08 0.00 0 22 25 2 425.76773 850.52818 2.83 20.94 1772 1772 MS2 12/12 Linfeng_122411_rIgG_6.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 545 2.08 0.00 0 40 25 2 472.76941 944.53154 0.28 36.15 3445 3445 MS2 13/16 Linfeng_122411_rIgG_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 494 2.06 0.00 0 33 25 2 472.76810 944.52892 -2.50 31.57 3682 3682 MS2 13/16 Linfeng_091311_rIgG_2.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 492 2.02 0.00 0 42 25 2 472.76788 944.52849 -2.96 31.68 3587 3587 MS2 13/16 Linfeng_091311_rIgG_5.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 144 2.02 0.00 0 31 25 2 425.76480 850.52233 -4.06 24.59 2662 2662 MS2 12/12 Linfeng_091311_rIgG_7.raw High HLQLAIR Unambiguous 22 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 62 2.01 0.00 0 20 100 2 425.76801 850.52873 3.47 23.12 1827 1827 MS2 11/12 Linfeng_20120130_CHD1_10.raw High AGLQFPVGR Unambiguous 20 4 IPI00026272.2;IPI00216457.7;IPI00018278.3;IPI00219037.5 CID 1.0000 0.0000 1 1 547 2.00 0.00 0 50 25 2 472.76932 944.53136 0.08 33.85 3151 3151 MS2 13/16 Linfeng_122411_rIgG_10.raw IPI00215965.3 Isoform A1-B of Heterogeneous nuclear ribonucleoprotein A1 52.42 12 14 15 41 66.15 46.77 12 20 37.69 33.06 9 11 34.10 12.10 3 10 372 38.7 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR Unambiguous 1 1 IPI00215965.3 CID 1.0000 0.0000 1 1 7 7.03 0.00 0 1 25 3 958.71490 2874.13016 -2.45 29.82 3389 3389 MS2 49/128 Linfeng_091311_rIgG_6.raw High GFGFVTYATVEEVDAAMNAR Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 353 6.34 0.00 0 12 100 2 1074.50732 2148.00737 0.29 55.15 6077 6077 MS2 29/38 Linfeng_20120130_CHD1_7.raw High GGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSR Unambiguous 1 1 IPI00215965.3 CID 1.0000 0.0000 1 1 14 5.76 0.00 0 2 25 3 958.71997 2874.14536 2.83 28.90 2828 2828 MS2 37/128 Linfeng_122411_rIgG_6.raw High GFAFVTFDDHDSVDK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 217 4.31 0.00 0 15 100 2 850.38617 1699.76506 3.02 46.44 4843 4843 MS2 20/28 Linfeng_20120130_CHD1_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 319 4.26 0.00 0 7 20 2 892.95569 1784.90410 -1.40 43.06 5072 5072 MS2 26/30 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 356 3.96 0.00 0 20 25 2 892.96051 1784.91374 4.01 41.86 4466 4466 MS2 26/30 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 334 3.81 0.00 0 20 25 2 892.95898 1784.91069 2.30 41.89 3906 3906 MS2 23/30 Linfeng_122411_rIgG_7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 11 3.75 0.00 0 4 25 2 847.85315 1694.69902 -0.66 17.99 1727 1727 MS2 22/34 Linfeng_091311_rIgG_9.raw High RGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 182 3.75 0.00 1 45 25 3 619.28998 1855.85538 -3.05 33.54 3865 3865 MS2 27/60 Linfeng_091311_rIgG_7.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 383 3.75 0.00 0 6 25 3 595.64197 1784.91135 2.67 41.90 4472 4472 MS2 31/60 Linfeng_122411_rIgG_6.raw High GFAFVTFDDHDSVDK Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 224 3.75 0.00 0 43 100 2 850.38763 1699.76799 4.75 46.63 4601 4601 MS2 20/28 Linfeng_20120130_CHD1_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 10 3.74 0.00 0 2 25 2 847.85260 1694.69792 -1.31 17.84 1728 1728 MS2 25/34 Linfeng_091311_rIgG_7.raw High RGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 215 3.66 0.00 1 28 25 3 619.29285 1855.86399 1.59 32.68 3321 3321 MS2 27/60 Linfeng_122411_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 12 3.62 0.00 0 0 25 2 847.85126 1694.69524 -2.89 17.90 1795 1795 MS2 23/34 Linfeng_091311_rIgG_8.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 13 3.46 0.00 0 13 25 2 847.85303 1694.69878 -0.80 17.90 1768 1768 MS2 25/34 Linfeng_091311_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 14 3.43 0.00 0 3 25 3 565.57007 1694.69565 -2.65 17.91 1738 1738 MS2 31/68 Linfeng_091311_rIgG_7.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 13 3.18 0.00 0 7 25 3 565.57080 1694.69785 -1.35 17.99 1781 1781 MS2 24/68 Linfeng_091311_rIgG_6.raw High NQGGYGGSSSSSSYGSGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 20 3.12 0.00 0 16 25 2 847.85602 1694.70476 2.73 16.97 1366 1366 MS2 17/34 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 385 3.11 0.00 0 5 25 3 595.63898 1784.90238 -2.36 43.09 5076 5076 MS2 33/60 Linfeng_091311_rIgG_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 673 3.06 0.00 0 20 100 2 609.82581 1218.64433 3.62 47.42 4772 4772 MS2 17/18 Linfeng_20120130_CHD1_6.raw High IEVIEImTDR Unambiguous 10 1 IPI00215965.3 M7(Oxidation) CID 1.0000 0.0000 1 1 584 3.05 0.00 0 44 100 2 617.82233 1234.63738 2.06 33.93 2592 2592 MS2 15/18 Linfeng_20120130_CHD1_6.raw High IEVIEImTDR Unambiguous 10 1 IPI00215965.3 M7(Oxidation) CID 1.0000 0.0000 1 1 613 3.05 0.00 0 8 100 2 617.82269 1234.63811 2.65 34.84 2684 2684 MS2 15/18 Linfeng_20120130_CHD1_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 493 3.02 0.00 0 14 25 2 609.82458 1218.64189 1.62 37.04 3865 3865 MS2 17/18 Linfeng_122411_rIgG_6.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 670 3.00 0.00 0 26 100 2 609.82532 1218.64336 2.82 47.37 5059 5059 MS2 17/18 Linfeng_20120130_CHD1_7.raw High KLFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 398 2.96 0.00 1 16 25 3 638.33698 1912.99637 -2.71 38.89 4560 4560 MS2 26/64 Linfeng_091311_rIgG_6.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 214 2.87 0.00 0 0 25 2 814.89191 1628.77654 -3.13 24.75 2684 2684 MS2 21/30 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 371 2.86 0.00 1 4 25 3 627.32495 1879.96030 -3.12 25.54 2818 2818 MS2 30/60 Linfeng_091311_rIgG_6.raw High IEVIEImTDR Unambiguous 10 1 IPI00215965.3 M7(Oxidation) CID 1.0000 0.0000 1 1 582 2.83 0.00 0 18 100 2 617.82275 1234.63823 2.75 34.26 2914 2914 MS2 15/18 Linfeng_20120130_CHD1_9.raw High KLFIGGLSFETTDESLR Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 390 2.77 0.00 1 23 25 3 638.33966 1913.00443 1.50 37.99 3984 3984 MS2 28/64 Linfeng_122411_rIgG_6.raw Medium KRGFAFVTFDDHDSVDK Unambiguous 9 1 IPI00215965.3 CID 1.0000 0.0000 1 1 274 2.74 0.00 2 11 25 4 496.74567 1983.96084 2.43 29.82 2949 2949 MS2 30/96 Linfeng_122411_rIgG_6.raw High EDSQRPGAHLTVK Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 393 2.74 0.00 0 0 25 2 719.37451 1437.74175 -1.94 17.52 1684 1684 MS2 16/24 Linfeng_091311_rIgG_7.raw High GGGFGGNDNFGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 74 2.72 0.00 0 15 25 2 577.75092 1154.49455 -2.49 25.24 2753 2753 MS2 18/22 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEHHLR Unambiguous 12 2 IPI00414696.1;IPI00215965.3 CID 1.0000 0.0000 1 2 373 2.69 0.00 1 2 25 3 627.32483 1879.95993 -3.32 24.91 2706 2706 MS2 27/60 Linfeng_091311_rIgG_7.raw High IEVIEImTDR Unambiguous 10 1 IPI00215965.3 M7(Oxidation) CID 1.0000 0.0000 1 1 623 2.66 0.00 0 22 100 2 617.82257 1234.63786 2.45 33.83 2553 2553 MS2 14/18 Linfeng_20120130_CHD1_7.raw High YHTVNGHNcEVR Unambiguous 8 1 IPI00215965.3 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 2.65 0.00 0 38 25 2 743.33606 1485.66484 -0.24 14.16 1221 1221 MS2 18/22 Linfeng_091311_rIgG_7.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 429 2.63 0.00 0 17 25 2 609.82135 1218.63542 -3.69 38.04 4453 4453 MS2 17/18 Linfeng_091311_rIgG_6.raw High SSGPYGGGGQYFAKPR Unambiguous 6 1 IPI00215965.3 CID 1.0000 0.0000 1 1 221 2.62 0.00 0 15 25 2 814.89679 1628.78630 2.86 21.78 1879 1879 MS2 17/30 Linfeng_122411_rIgG_6.raw High IEVIEIMTDR Unambiguous 10 1 IPI00215965.3 CID 1.0000 0.0000 1 1 420 2.52 0.00 0 6 25 2 609.82123 1218.63518 -3.89 37.98 4432 4432 MS2 17/18 Linfeng_091311_rIgG_7.raw High GGGFGGNDNFGR Unambiguous 4 1 IPI00215965.3 CID 1.0000 0.0000 1 1 98 2.47 0.00 0 26 25 2 577.75348 1154.49968 1.95 22.70 2003 2003 MS2 18/22 Linfeng_122411_rIgG_6.raw High SESPKEPEQLR Unambiguous 8 1 IPI00215965.3 CID 1.0000 0.0000 1 1 288 2.18 0.00 1 0 25 2 650.32892 1299.65056 -2.63 18.37 1802 1802 MS2 17/20 Linfeng_091311_rIgG_7.raw High IEVIEImTDR Unambiguous 10 1 IPI00215965.3 M7(Oxidation) CID 1.0000 0.0000 1 1 631 2.04 0.00 0 39 100 2 617.82141 1234.63555 0.57 35.11 2720 2720 MS2 12/18 Linfeng_20120130_CHD1_7.raw IPI00216592.2 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 52.22 11 11 22 111 109.45 35.49 13 37 78.54 35.49 17 28 152.39 31.40 10 46 293 32.3 5.08 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAAEmYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 M5(Oxidation) CID 1.0000 0.0000 1 1 69 5.70 0.00 0 2 100 2 1059.44629 2117.88530 4.51 44.93 4247 4247 MS2 23/34 Linfeng_20120130_CHD1_6.raw High SAAEmYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 M5(Oxidation) CID 1.0000 0.0000 1 1 72 5.58 0.00 0 26 100 3 706.63354 2117.88608 4.88 45.19 4298 4298 MS2 31/68 Linfeng_20120130_CHD1_6.raw High SAAEMYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 CID 1.0000 0.0000 1 1 83 5.58 0.00 0 12 100 2 1051.44775 2101.88823 3.52 48.29 4975 4975 MS2 24/34 Linfeng_20120130_CHD1_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 312 5.10 0.00 0 4 25 3 561.64471 1682.91959 2.92 38.04 3991 3991 MS2 38/60 Linfeng_122411_rIgG_6.raw High SAAEmYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 M5(Oxidation) CID 1.0000 0.0000 1 1 68 4.98 0.00 0 20 100 2 1059.44678 2117.88628 4.97 45.94 4456 4456 MS2 21/34 Linfeng_20120130_CHD1_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 334 4.94 0.00 0 8 20 3 561.64160 1682.91025 -2.63 39.07 4582 4582 MS2 37/60 Linfeng_091311_rIgG_6.raw High mIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 M1(Oxidation) CID 1.0000 0.0000 1 1 499 4.90 0.00 0 35 100 2 849.96191 1698.91655 4.10 44.89 4239 4239 MS2 23/30 Linfeng_20120130_CHD1_6.raw High SAAEmYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 M5(Oxidation) CID 1.0000 0.0000 1 1 68 4.90 0.00 0 19 100 2 1059.44531 2117.88335 3.58 45.18 4548 4548 MS2 20/34 Linfeng_20120130_CHD1_7.raw High mIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 M1(Oxidation) CID 1.0000 0.0000 1 1 512 4.50 0.00 0 28 100 2 849.96204 1698.91680 4.24 45.91 4450 4450 MS2 20/30 Linfeng_20120130_CHD1_6.raw High SAAEmYGSSFDLDYDFQR Unambiguous 3 1 IPI00216592.2 M5(Oxidation) CID 1.0000 0.0000 1 1 67 4.46 0.00 0 37 100 2 1059.44556 2117.88384 3.82 45.55 4636 4636 MS2 19/34 Linfeng_20120130_CHD1_7.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 324 4.37 0.00 0 3 25 3 443.88971 1329.65458 -3.07 37.03 4325 4325 MS2 27/40 Linfeng_091311_rIgG_6.raw High mIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 M1(Oxidation) CID 1.0000 0.0000 1 1 512 4.36 0.00 0 37 100 2 849.96045 1698.91362 2.38 45.12 4533 4533 MS2 21/30 Linfeng_20120130_CHD1_7.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 281 4.34 0.00 0 9 25 2 841.96375 1682.92021 3.29 38.06 3993 3993 MS2 26/30 Linfeng_122411_rIgG_6.raw High mIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 M1(Oxidation) CID 1.0000 0.0000 1 1 546 4.22 0.00 0 41 100 2 849.96167 1698.91606 3.81 44.83 4227 4227 MS2 21/30 Linfeng_20120130_CHD1_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 328 4.19 0.00 0 13 25 3 561.64166 1682.91043 -2.52 39.15 4580 4580 MS2 36/60 Linfeng_091311_rIgG_7.raw High mIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 M1(Oxidation) CID 1.0000 0.0000 1 1 551 4.11 0.00 0 35 100 3 566.97662 1698.91532 3.37 45.00 4259 4259 MS2 27/60 Linfeng_20120130_CHD1_6.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 297 4.10 0.00 0 25 2 841.95905 1682.91081 -2.29 39.29 4597 4597 MS2 25/30 Linfeng_091311_rIgG_7.raw High MIAGQVLDINLAAEPK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 302 3.97 0.00 0 23 25 2 841.95850 1682.90972 -2.94 39.08 4583 4583 MS2 26/30 Linfeng_091311_rIgG_6.raw High EAEEGEDDRDSANGEDDS Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 1 3.75 0.00 1 15 25 2 970.34937 1939.69145 0.30 15.36 1416 1416 MS2 20/34 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.73 0.00 1 10 25 3 367.54764 1100.62836 -2.45 22.68 2398 2398 MS2 23/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 105 3.72 0.00 0 2 1 2 658.90076 1316.79424 0.40 48.54 5048 5048 MS2 19/22 Linfeng_20120130_CHD1_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 501 3.53 0.00 0 1 100 2 665.33606 1329.66484 4.65 46.65 4604 4604 MS2 17/20 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 3.49 0.00 1 13 100 2 562.30450 1123.60173 2.06 29.41 2073 2073 MS2 14/18 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.44 0.00 1 11 25 3 367.54770 1100.62854 -2.29 22.55 2408 2408 MS2 21/36 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 532 3.41 0.00 0 4 100 2 665.33569 1329.66411 4.10 45.63 4392 4392 MS2 17/20 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 440 3.41 0.00 1 4 21 3 472.59454 1415.76908 -3.55 33.01 3808 3808 MS2 20/44 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 334 3.36 0.00 0 4 22 2 665.33362 1329.65996 0.98 35.98 3732 3732 MS2 17/20 Linfeng_122411_rIgG_6.raw High IVGcSVHKGFAFVQYVNER Unambiguous 6 1 IPI00216592.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 340 3.34 0.00 1 19 25 4 553.28577 2210.12124 1.64 31.81 3208 3208 MS2 34/108 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 461 3.33 0.00 1 5 18 3 472.59631 1415.77439 0.20 32.08 3243 3243 MS2 22/44 Linfeng_122411_rIgG_6.raw High GDDQLELIKDDEK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 433 3.29 0.00 1 13 100 2 759.37213 1517.73699 2.60 27.84 1936 1936 MS2 16/24 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 455 3.23 0.00 1 9 100 2 562.30450 1123.60173 2.06 29.53 2084 2084 MS2 14/18 Linfeng_20120130_CHD1_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 321 3.20 0.00 0 13 25 2 665.33350 1329.65972 0.79 34.60 2993 2993 MS2 17/20 Linfeng_122411_rIgG_7.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 3.18 0.00 1 9 25 3 472.59464 1415.76935 -3.35 33.13 3814 3814 MS2 20/44 Linfeng_091311_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 444 3.17 0.00 1 14 100 2 562.30475 1123.60222 2.49 29.37 2070 2070 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 438 3.12 0.00 1 10 100 2 562.30457 1123.60185 2.17 29.82 2107 2107 MS2 14/18 Linfeng_20120130_CHD1_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 318 3.12 0.00 0 4 7 2 665.32996 1329.65264 -4.53 36.93 4311 4311 MS2 17/20 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 3.10 0.00 1 20 100 2 562.30530 1123.60332 3.47 30.84 2209 2209 MS2 14/18 Linfeng_20120130_CHD1_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 528 3.06 0.00 0 2 100 2 665.33588 1329.66448 4.37 46.74 4622 4622 MS2 17/20 Linfeng_20120130_CHD1_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 338 3.05 0.00 0 11 16 3 443.89166 1329.66043 1.33 36.08 3745 3745 MS2 27/40 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 129 3.05 0.00 0 5 22 3 439.60141 1316.78968 -3.06 38.56 4519 4519 MS2 27/44 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 319 3.04 0.00 0 11 13 2 665.33002 1329.65276 -4.44 36.97 4304 4304 MS2 17/20 Linfeng_091311_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 3.01 0.00 1 26 100 2 562.30444 1123.60161 1.95 28.69 2013 2013 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 454 2.98 0.00 1 10 100 2 562.30457 1123.60185 2.17 29.75 2101 2101 MS2 15/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 379 2.95 0.00 1 7 15 3 375.20358 1123.59620 -2.87 27.85 3126 3126 MS2 23/36 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 2.95 0.00 1 33 100 2 562.30475 1123.60222 2.49 28.18 1964 1964 MS2 13/18 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 2.93 0.00 1 76 25 3 367.54758 1100.62818 -2.62 22.64 2459 2459 MS2 19/36 Linfeng_091311_rIgG_8.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 95 2.93 0.00 0 1 25 3 439.60367 1316.79645 2.08 37.44 3915 3915 MS2 29/44 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.91 0.00 1 21 25 3 472.59464 1415.76935 -3.35 33.17 3882 3882 MS2 16/44 Linfeng_091311_rIgG_8.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 454 2.91 0.00 1 14 100 2 562.30450 1123.60173 2.06 29.23 2058 2058 MS2 15/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 439 2.90 0.00 1 18 100 2 562.30457 1123.60185 2.17 29.18 2053 2053 MS2 15/18 Linfeng_20120130_CHD1_6.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 112 2.90 0.00 1 19 25 3 518.56909 1553.69272 0.07 11.20 895 895 MS2 25/52 Linfeng_091311_rIgG_6.raw High VDSLLENLEKIEKEQSK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 361 2.88 0.00 2 5 25 3 668.02954 2002.07407 1.85 37.68 3945 3945 MS2 26/64 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 2.84 0.00 1 28 100 2 562.30481 1123.60234 2.60 28.46 1992 1992 MS2 14/18 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 311 2.83 0.00 2 5 0 3 410.24725 1228.72721 0.96 3.29 318 318 MS2 24/40 Linfeng_122411_rIgG_6.raw High KSDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 474 2.82 0.00 2 8 25 3 491.26559 1471.78223 2.07 28.87 2824 2824 MS2 30/48 Linfeng_122411_rIgG_6.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 116 2.81 0.00 1 14 25 2 777.35126 1553.69524 1.69 11.23 900 900 MS2 21/26 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 362 2.81 0.00 1 10 25 3 375.20529 1123.60132 1.69 26.16 2462 2462 MS2 25/36 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 447 2.80 0.00 1 10 100 2 562.30444 1123.60161 1.95 29.78 2104 2104 MS2 15/18 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 512 2.78 0.00 1 0 100 2 708.39313 1415.77898 3.44 43.51 3922 3922 MS2 15/22 Linfeng_20120130_CHD1_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 795 2.75 0.00 0 6 100 2 580.31464 1159.62200 1.25 43.67 3960 3960 MS2 16/18 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 99 2.75 0.00 0 14 25 2 658.90125 1316.79521 1.14 36.95 3288 3288 MS2 20/22 Linfeng_122411_rIgG_7.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 322 2.75 0.00 2 16 25 3 410.24585 1228.72300 -2.47 19.68 1986 1986 MS2 22/40 Linfeng_091311_rIgG_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 520 2.75 0.00 0 7 25 2 580.31030 1159.61333 -6.23 35.55 4135 4135 MS2 16/18 Linfeng_091311_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 556 2.74 0.00 1 15 100 2 708.39270 1415.77812 2.84 43.62 3948 3948 MS2 16/22 Linfeng_20120130_CHD1_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 687 2.73 0.00 0 0 100 2 580.31512 1159.62297 2.09 43.55 3932 3932 MS2 16/18 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 526 2.72 0.00 1 10 100 2 708.39417 1415.78105 4.91 43.22 3867 3867 MS2 12/22 Linfeng_20120130_CHD1_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 2.72 0.00 0 21 25 2 430.22852 859.44975 -2.64 22.63 2418 2418 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.70 0.00 0 4 2 2 658.89856 1316.78984 -2.94 38.55 4517 4517 MS2 20/22 Linfeng_091311_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 573 2.69 0.00 0 13 25 2 580.31134 1159.61540 -4.44 35.61 4132 4132 MS2 16/18 Linfeng_091311_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 451 2.69 0.00 1 14 100 2 562.30450 1123.60173 2.06 29.48 2080 2080 MS2 14/18 Linfeng_20120130_CHD1_6.raw High GDDQLELIK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 719 2.68 0.00 0 16 100 2 515.77557 1030.54387 2.23 29.85 2110 2110 MS2 14/16 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 457 2.67 0.00 1 35 100 2 562.30536 1123.60344 3.58 28.12 1959 1959 MS2 12/18 Linfeng_20120130_CHD1_6.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 133 2.67 0.00 1 2 25 3 518.57104 1553.69858 3.84 3.03 283 283 MS2 25/52 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.63 0.00 0 3 6 2 658.89728 1316.78728 -4.88 38.61 4510 4510 MS2 20/22 Linfeng_091311_rIgG_7.raw High NDKSEEEQSSSSVK Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 113 2.62 0.00 1 6 24 3 518.56903 1553.69254 -0.05 2.44 214 214 MS2 24/52 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.62 0.00 0 8 25 2 658.90186 1316.79643 2.07 37.62 3938 3938 MS2 19/22 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 386 2.62 0.00 0 21 25 2 430.22986 859.45244 0.49 4.62 516 516 MS2 13/14 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 373 2.61 0.00 1 8 25 3 375.20346 1123.59583 -3.20 27.91 3113 3113 MS2 22/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 92 2.61 0.00 0 16 25 2 658.90222 1316.79717 2.62 37.46 3611 3611 MS2 18/22 Linfeng_122411_rIgG_10.raw High GDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 429 2.61 0.00 1 8 6 2 494.27747 987.54766 0.67 3.30 319 319 MS2 15/16 Linfeng_122411_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 578 2.60 0.00 0 32 25 2 580.31506 1159.62285 1.98 31.39 2588 2588 MS2 16/18 Linfeng_122411_rIgG_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 699 2.59 0.00 0 19 100 2 580.31598 1159.62468 3.56 43.13 4063 4063 MS2 16/18 Linfeng_20120130_CHD1_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 437 2.59 0.00 1 11 100 2 562.30457 1123.60185 2.17 29.68 2095 2095 MS2 14/18 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 497 2.58 0.00 0 4 100 2 498.25711 995.50694 2.50 31.92 2312 2312 MS2 12/16 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 323 2.56 0.00 2 34 25 3 410.24576 1228.72272 -2.69 20.69 2157 2157 MS2 19/40 Linfeng_091311_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 313 2.53 0.00 0 34 25 2 665.33087 1329.65447 -3.15 36.95 4453 4453 MS2 17/20 Linfeng_091311_rIgG_10.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 528 2.52 0.00 1 0 100 2 708.39355 1415.77983 4.05 43.44 3907 3907 MS2 13/22 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 328 2.51 0.00 1 7 10 2 562.30157 1123.59587 -3.16 27.85 3125 3125 MS2 14/18 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 80 2.49 0.00 0 27 25 2 658.90295 1316.79863 3.74 54.28 5899 5899 MS2 14/22 Linfeng_122411_rIgG_6.raw High SDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 345 2.49 0.00 1 26 25 2 672.34662 1343.68596 1.30 31.82 3209 3209 MS2 18/22 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 8 25 2 658.89819 1316.78911 -3.49 38.59 4664 4664 MS2 18/22 Linfeng_091311_rIgG_10.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 697 2.40 0.00 0 28 100 2 580.31580 1159.62432 3.25 42.53 3757 3757 MS2 13/18 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 505 2.39 0.00 0 1 100 2 498.25717 995.50707 2.63 32.91 2446 2446 MS2 13/16 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.36 0.00 0 8 25 2 658.89771 1316.78813 -4.24 38.64 4517 4517 MS2 19/22 Linfeng_091311_rIgG_9.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 98 2.32 0.00 0 0 25 2 598.76727 1196.52727 -0.41 6.48 538 538 MS2 16/20 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVKK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 35 2.27 0.00 1 11 25 2 722.94958 1444.89189 2.22 33.29 3398 3398 MS2 15/24 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.24 0.00 0 59 25 2 430.22852 859.44975 -2.64 22.71 2402 2402 MS2 13/14 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.23 0.00 0 36 25 2 658.90192 1316.79656 2.16 37.27 3730 3730 MS2 16/22 Linfeng_122411_rIgG_2.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 497 2.23 0.00 0 1 100 2 498.25693 995.50658 2.14 33.93 2591 2591 MS2 13/16 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 572 2.20 0.00 1 0 100 2 708.39276 1415.77825 2.93 43.83 3996 3996 MS2 10/22 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 276 2.20 0.00 0 4 13 2 498.25635 995.50542 0.97 30.15 2993 2993 MS2 15/16 Linfeng_122411_rIgG_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 459 2.16 0.00 0 14 100 2 498.25650 995.50572 1.28 32.96 2428 2428 MS2 12/16 Linfeng_20120130_CHD1_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 688 2.13 0.00 0 30 100 2 580.31549 1159.62370 2.72 43.05 4047 4047 MS2 14/18 Linfeng_20120130_CHD1_7.raw High LKGDDLQAIKK Unambiguous 5 1 IPI00216592.2 CID 1.0000 0.0000 1 1 299 2.13 0.00 2 4 7 2 614.86749 1228.72771 1.37 3.30 320 320 MS2 18/20 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 331 2.12 0.00 1 14 25 2 562.30176 1123.59624 -2.83 27.81 3099 3099 MS2 13/18 Linfeng_091311_rIgG_7.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 111 2.10 0.00 0 34 25 2 598.77051 1196.53374 5.00 3.15 297 297 MS2 16/20 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 88 2.09 0.00 0 48 25 2 658.90179 1316.79631 1.98 48.18 5259 5259 MS2 14/22 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 355 2.08 0.00 1 11 9 2 562.30353 1123.59978 0.32 26.25 2474 2474 MS2 14/18 Linfeng_122411_rIgG_6.raw High GFAFVQYVNER Unambiguous 6 1 IPI00216592.2 CID 1.0000 0.0000 1 1 308 2.04 0.00 0 21 25 2 665.33093 1329.65459 -3.06 37.14 4323 4323 MS2 17/20 Linfeng_091311_rIgG_9.raw High SEEEQSSSSVK Unambiguous 7 1 IPI00216592.2 CID 1.0000 0.0000 1 1 111 2.02 0.00 0 0 25 2 598.76770 1196.52812 0.30 5.47 468 468 MS2 16/20 Linfeng_091311_rIgG_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 300 2.01 0.00 0 2 22 2 498.25476 995.50224 -2.22 31.60 3612 3612 MS2 13/16 Linfeng_091311_rIgG_7.raw IPI00217473.5 Hemoglobin subunit zeta 51.41 1 6 6 14 8.76 26.06 3 3 12.32 25.35 3 4 20.18 28.87 3 7 142 15.6 8.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 343 4.20 0.00 0 0 25 2 817.91162 1634.81597 -4.45 28.70 3354 3354 MS2 23/28 Linfeng_091311_rIgG_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 332 4.08 0.00 0 3 9 2 817.91449 1634.82170 -0.94 4.09 436 436 MS2 23/28 Linfeng_122411_rIgG_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 573 3.97 0.00 0 9 100 2 817.91785 1634.82842 3.17 29.36 2713 2713 MS2 21/28 Linfeng_20120130_CHD1_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 363 3.89 0.00 0 0 25 2 817.91632 1634.82536 1.30 27.62 2320 2320 MS2 22/28 Linfeng_122411_rIgG_10.raw High ISTQADTIGTETLER Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 546 3.65 0.00 0 7 100 2 817.91882 1634.83037 4.36 30.36 2878 2878 MS2 21/28 Linfeng_20120130_CHD1_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 737 2.78 0.00 0 18 100 2 538.28680 1075.56633 3.06 29.97 2811 2811 MS2 15/20 Linfeng_20120130_CHD1_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 743 2.55 0.00 0 22 100 2 538.28680 1075.56633 3.06 30.08 2829 2829 MS2 13/20 Linfeng_20120130_CHD1_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 674 2.54 0.00 0 27 100 2 538.28760 1075.56792 4.53 28.92 2639 2639 MS2 14/20 Linfeng_20120130_CHD1_10.raw High FLSVVSSVLTEK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 239 2.52 0.00 0 6 25 2 654.87305 1308.73882 -1.67 39.21 4743 4743 MS2 20/22 Linfeng_091311_rIgG_10.raw Medium FPADFTAEAHAAWDK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 327 2.46 0.00 0 21 100 3 559.59760 1676.77823 4.65 42.89 5370 5370 MS2 28/56 Linfeng_20120130_CHD1_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 746 2.23 0.00 0 25 100 2 538.28693 1075.56658 3.29 28.95 2643 2643 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LSELHAYILR Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 398 2.21 0.00 0 62 25 2 607.85059 1214.69390 3.85 26.80 2211 2211 MS2 15/18 Linfeng_122411_rIgG_10.raw High SIDDIGGALSK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 628 2.14 0.00 0 64 25 2 538.28632 1075.56536 2.15 25.92 2096 2096 MS2 15/20 Linfeng_122411_rIgG_10.raw High VVAAVGDAVK Unambiguous 1 1 IPI00217473.5 CID 1.0000 0.0000 1 1 292 2.05 0.00 0 9 25 2 464.77524 928.54320 -3.31 21.94 2406 2406 MS2 14/18 Linfeng_091311_rIgG_10.raw IPI00217963.3 "Keratin, type I cytoskeletal 16" 49.26 16 9 22 292 190.77 36.15 15 71 103.72 25.58 12 36 572.71 38.90 16 185 473 51.2 5.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 180 5.67 0.00 0 20 100 2 1032.57971 2064.15215 3.52 47.67 6330 6330 MS2 23/36 Linfeng_20120130_CHD1_4.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 188 5.57 0.00 0 5 12 3 688.72058 2064.14719 1.12 37.72 3706 3706 MS2 40/72 Linfeng_122411_rIgG_8.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 199 5.55 0.00 0 7 24 3 688.71698 2064.13639 -4.12 38.62 4514 4514 MS2 44/72 Linfeng_091311_rIgG_9.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 324 5.46 0.00 0 0 100 2 1044.49146 2087.97563 4.45 35.29 3577 3577 MS2 25/40 Linfeng_20120130_CHD1_1.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 192 5.35 0.00 0 18 100 2 1032.57874 2064.15019 2.57 47.82 6551 6551 MS2 23/36 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 454 5.16 0.00 0 2 100 3 784.03790 2350.09916 3.62 23.60 1611 1611 MS2 28/84 Linfeng_20120130_CHD1_1.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 585 5.04 0.00 1 7 100 3 707.35498 2120.05039 1.75 27.53 2264 2264 MS2 31/72 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 216 4.99 0.00 0 6 25 3 784.03760 2350.09824 3.23 24.12 1955 1955 MS2 31/84 Linfeng_122411_rIgG_8.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 303 4.97 0.00 0 5 100 2 1052.48743 2103.96758 3.00 30.04 2634 2634 MS2 24/40 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 189 4.95 0.00 0 3 25 3 784.03375 2350.08670 -1.68 25.20 2745 2745 MS2 37/84 Linfeng_091311_rIgG_9.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 295 4.94 0.00 0 11 100 2 1052.48804 2103.96880 3.58 29.85 2491 2491 MS2 24/40 Linfeng_20120130_CHD1_1.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 177 4.93 0.00 0 17 100 2 1032.57983 2064.15239 3.64 47.49 6472 6472 MS2 23/36 Linfeng_20120130_CHD1_10.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 206 4.92 0.00 0 26 12 3 688.71918 2064.14298 -0.92 37.50 4066 4066 MS2 38/72 Linfeng_122411_rIgG_5.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 275 4.89 0.00 0 3 100 2 1052.48730 2103.96733 2.88 30.02 2819 2819 MS2 25/40 Linfeng_20120130_CHD1_10.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 624 4.81 0.00 1 1 100 3 707.35724 2120.05716 4.95 27.39 2093 2093 MS2 28/72 Linfeng_20120130_CHD1_1.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 310 4.77 0.00 0 0 100 2 1044.49036 2087.97344 3.39 35.44 3993 3993 MS2 26/40 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 469 4.76 0.00 0 0 100 3 784.03864 2350.10135 4.55 23.93 1526 1526 MS2 34/84 Linfeng_20120130_CHD1_2.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 178 4.73 0.00 0 4 25 3 688.72113 2064.14884 1.92 37.31 3333 3333 MS2 41/72 Linfeng_122411_rIgG_7.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 298 4.65 0.00 0 5 100 2 1044.48938 2087.97148 2.46 35.68 3953 3953 MS2 21/40 Linfeng_20120130_CHD1_8.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 288 4.59 0.00 0 0 100 2 1044.49109 2087.97490 4.09 35.57 3249 3249 MS2 21/40 Linfeng_20120130_CHD1_2.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 441 4.53 0.00 0 3 100 3 784.03729 2350.09732 2.84 23.95 1682 1682 MS2 29/84 Linfeng_20120130_CHD1_5.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 471 4.53 0.00 0 6 100 3 784.03888 2350.10208 4.87 23.78 1917 1917 MS2 30/84 Linfeng_20120130_CHD1_10.raw High GQTGGDVNVEMDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 300 4.51 0.00 0 5 100 2 1044.48877 2087.97026 1.87 35.56 3821 3821 MS2 23/40 Linfeng_20120130_CHD1_4.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 599 4.47 0.00 1 17 100 3 707.35675 2120.05570 4.26 27.75 2192 2192 MS2 29/72 Linfeng_20120130_CHD1_4.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 324 4.47 0.00 1 15 25 3 707.35016 2120.03592 -5.07 26.78 2722 2722 MS2 33/72 Linfeng_091311_rIgG_1.raw High IIAATIENAQPILQIDNAR Unambiguous 4 1 IPI00217963.3 CID 1.0000 0.0000 1 1 203 4.36 0.00 0 14 25 3 688.71686 2064.13602 -4.29 38.48 4588 4588 MS2 41/72 Linfeng_091311_rIgG_2.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 277 4.33 0.00 0 5 100 2 1052.48706 2103.96684 2.65 30.05 2762 2762 MS2 21/40 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 509 4.27 0.00 0 4 81 2 651.33557 1301.66387 4.19 27.48 2142 2142 MS2 18/22 Linfeng_20120130_CHD1_4.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 459 4.24 0.00 0 22 100 3 784.03809 2350.09970 3.85 24.79 1736 1736 MS2 30/84 Linfeng_20120130_CHD1_1.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 455 4.24 0.00 0 12 100 3 784.03760 2350.09824 3.23 23.93 1595 1595 MS2 30/84 Linfeng_20120130_CHD1_4.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 284 4.19 0.00 0 0 100 2 1052.48816 2103.96904 3.70 30.05 2258 2258 MS2 23/40 Linfeng_20120130_CHD1_2.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 600 4.11 0.00 1 5 100 3 707.35663 2120.05533 4.09 27.49 2409 2409 MS2 26/72 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 185 4.05 0.00 0 0 25 3 784.03345 2350.08579 -2.07 25.17 2712 2712 MS2 31/84 Linfeng_091311_rIgG_5.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 301 3.84 0.00 0 0 100 2 1052.48804 2103.96880 3.58 30.33 2195 2195 MS2 22/40 Linfeng_20120130_CHD1_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 508 3.70 0.00 0 23 100 2 651.33472 1301.66216 2.88 24.45 1652 1652 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 502 3.70 0.00 0 20 100 2 651.33502 1301.66277 3.35 27.38 2312 2312 MS2 17/22 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 481 3.68 0.00 0 33 100 2 651.33533 1301.66338 3.82 26.47 1954 1954 MS2 18/22 Linfeng_20120130_CHD1_4.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 604 3.66 0.00 1 9 100 3 707.35583 2120.05295 2.96 27.73 1946 1946 MS2 26/72 Linfeng_20120130_CHD1_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 480 3.66 0.00 0 28 100 2 651.33612 1301.66496 5.03 24.53 1705 1705 MS2 15/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 493 3.62 0.00 0 35 100 2 651.33557 1301.66387 4.19 28.50 2334 2334 MS2 16/22 Linfeng_20120130_CHD1_4.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 295 3.60 0.00 0 0 25 2 703.34766 1405.68804 -2.69 21.60 2241 2241 MS2 20/24 Linfeng_091311_rIgG_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 517 3.60 0.00 0 26 100 2 651.33514 1301.66301 3.53 27.22 2368 2368 MS2 19/22 Linfeng_20120130_CHD1_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 510 3.50 0.00 0 22 100 2 651.33459 1301.66191 2.69 25.46 1796 1796 MS2 18/22 Linfeng_20120130_CHD1_4.raw High GQTGGDVNVEmDAAPGVDLSR Unambiguous 1 1 IPI00217963.3 M11(Oxidation) CID 1.0000 0.0000 1 1 315 3.47 0.00 0 4 100 3 701.99323 2103.96512 1.83 30.11 2646 2646 MS2 27/80 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 601 3.44 0.00 0 30 100 2 515.30231 1029.59734 3.30 36.62 4242 4242 MS2 15/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 500 3.40 0.00 1 3 100 2 690.36975 1379.73223 3.21 36.29 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 561 3.38 0.00 0 32 100 2 515.30255 1029.59783 3.77 36.55 4228 4228 MS2 15/16 Linfeng_20120130_CHD1_10.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 273 3.35 0.00 0 9 25 2 703.34796 1405.68865 -2.26 21.45 2286 2286 MS2 21/24 Linfeng_091311_rIgG_2.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 287 3.33 0.00 0 20 25 2 703.34851 1405.68974 -1.48 21.49 2262 2262 MS2 19/24 Linfeng_091311_rIgG_3.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 578 3.32 0.00 1 20 100 3 707.35529 2120.05130 2.19 28.13 2261 2261 MS2 21/72 Linfeng_20120130_CHD1_4.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 608 3.29 0.00 1 4 100 3 707.35693 2120.05625 4.52 27.57 2339 2339 MS2 28/72 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 3.28 0.00 1 39 100 2 532.80988 1064.61247 2.41 23.53 1641 1641 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 520 3.27 0.00 0 33 100 2 651.33496 1301.66265 3.25 27.18 2362 2362 MS2 15/22 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 3.26 0.00 1 28 100 2 532.81073 1064.61418 4.01 24.09 1617 1617 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 3.25 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.94 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 3.24 0.00 1 7 100 2 532.81036 1064.61345 3.32 23.69 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 492 3.23 0.00 0 41 100 2 651.33551 1301.66374 4.10 24.79 1734 1734 MS2 16/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 493 3.23 0.00 0 20 100 2 651.33466 1301.66203 2.78 27.58 1875 1875 MS2 16/22 Linfeng_20120130_CHD1_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.22 0.00 1 3 100 2 532.81079 1064.61431 4.13 23.87 1929 1929 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 554 3.22 0.00 0 11 100 2 515.30261 1029.59795 3.89 37.25 4154 4154 MS2 15/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 291 3.21 0.00 1 37 100 2 532.81067 1064.61406 3.90 23.49 1638 1638 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 3.19 0.00 1 24 100 2 532.81024 1064.61321 3.10 24.20 1628 1628 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 3.19 0.00 0 34 100 2 651.33527 1301.66326 3.72 28.21 2216 2216 MS2 15/22 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 566 3.17 0.00 1 17 100 2 690.36859 1379.72991 1.53 35.01 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.17 0.00 1 19 100 2 532.81055 1064.61382 3.67 25.40 1787 1787 MS2 13/16 Linfeng_20120130_CHD1_4.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 249 3.16 0.00 0 50 25 2 703.34802 1405.68877 -2.17 19.82 1774 1774 MS2 20/24 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 3.16 0.00 0 50 100 2 651.33533 1301.66338 3.82 25.01 1757 1757 MS2 16/22 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 631 3.16 0.00 0 38 100 2 515.30200 1029.59673 2.71 35.98 4191 4191 MS2 15/16 Linfeng_20120130_CHD1_5.raw High EVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 268 3.15 0.00 0 7 25 2 703.34808 1405.68889 -2.09 21.66 2241 2241 MS2 19/24 Linfeng_091311_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 504 3.15 0.00 0 36 100 2 651.33539 1301.66350 3.91 24.47 1695 1695 MS2 17/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 25 100 2 532.81049 1064.61370 3.55 25.51 1893 1893 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 21 100 2 532.80975 1064.61223 2.18 24.32 1728 1728 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 329 3.15 0.00 1 0 100 2 532.81036 1064.61345 3.32 25.98 1682 1682 MS2 14/16 Linfeng_20120130_CHD1_3.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.13 0.00 0 30 25 2 553.78412 1106.56096 -1.23 4.81 544 544 MS2 19/20 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.13 0.00 1 19 100 2 532.80963 1064.61199 1.95 24.50 1751 1751 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 292 3.12 0.00 1 24 100 2 532.81067 1064.61406 3.90 23.92 1679 1679 MS2 14/16 Linfeng_20120130_CHD1_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.11 0.00 1 0 100 2 532.81091 1064.61455 4.36 23.24 1566 1566 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 324 3.10 0.00 1 20 100 2 532.81042 1064.61357 3.44 24.13 1707 1707 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 3.08 0.00 1 3 100 2 532.81042 1064.61357 3.44 24.06 1655 1655 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 527 3.08 0.00 0 42 100 2 651.33466 1301.66203 2.78 27.97 2354 2354 MS2 17/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 3.07 0.00 1 3 100 2 532.81097 1064.61467 4.47 24.97 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 3.07 0.00 1 10 100 2 532.80975 1064.61223 2.18 25.31 1754 1754 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.07 0.00 1 26 100 2 532.81049 1064.61370 3.55 24.02 1607 1607 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 506 3.07 0.00 0 38 100 2 651.33508 1301.66289 3.44 28.06 2194 2194 MS2 16/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 516 3.05 0.00 0 50 100 2 651.33508 1301.66289 3.44 29.52 2531 2531 MS2 15/22 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.05 0.00 1 26 100 2 532.81067 1064.61406 3.90 23.73 1661 1661 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.05 0.00 1 3 100 2 532.81061 1064.61394 3.78 24.30 1966 1966 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 3.04 0.00 1 4 100 2 532.81055 1064.61382 3.67 23.47 1866 1866 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.04 0.00 1 36 100 2 532.80969 1064.61211 2.06 23.61 1650 1650 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 3.04 0.00 1 7 100 2 532.81049 1064.61370 3.55 23.60 1885 1885 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 309 3.04 0.00 1 3 100 2 532.81073 1064.61418 4.01 23.95 1936 1936 MS2 14/16 Linfeng_20120130_CHD1_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 497 3.03 0.00 0 46 100 2 651.33551 1301.66374 4.10 25.14 1769 1769 MS2 16/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.03 0.00 1 9 100 2 532.81067 1064.61406 3.90 25.32 2088 2088 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LLEGEDAHLSSQQASGQSYSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 218 3.03 0.00 0 11 25 3 784.03778 2350.09879 3.46 24.03 1812 1812 MS2 25/84 Linfeng_122411_rIgG_9.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 290 3.03 0.00 0 24 25 2 669.83429 1338.66130 -2.67 24.84 2765 2765 MS2 20/26 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 3.03 0.00 1 18 100 2 532.81061 1064.61394 3.78 24.22 1717 1717 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 489 3.03 0.00 0 34 100 2 651.33441 1301.66155 2.41 29.21 2474 2474 MS2 16/22 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 3.02 0.00 0 3 6 2 651.33167 1301.65605 -1.81 4.19 457 457 MS2 19/22 Linfeng_122411_rIgG_2.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 622 3.02 0.00 0 29 100 2 515.30243 1029.59758 3.54 36.62 3333 3333 MS2 15/16 Linfeng_20120130_CHD1_3.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 3.02 0.00 0 6 25 2 639.79468 1278.58208 -2.76 21.33 2269 2269 MS2 21/28 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 300 3.02 0.00 1 25 100 2 532.81085 1064.61443 4.24 23.80 1667 1667 MS2 14/16 Linfeng_20120130_CHD1_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 575 3.01 0.00 0 36 100 2 515.30249 1029.59770 3.65 36.14 3775 3775 MS2 15/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 548 3.00 0.00 0 48 100 2 651.33398 1301.66069 1.75 27.30 2210 2210 MS2 17/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.00 0.00 1 6 100 2 532.81055 1064.61382 3.67 23.43 1861 1861 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 346 2.98 0.00 1 13 100 2 532.81012 1064.61296 2.87 23.87 1650 1650 MS2 13/16 Linfeng_20120130_CHD1_9.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 2.98 0.00 0 13 4 2 651.33118 1301.65508 -2.56 4.10 471 471 MS2 18/22 Linfeng_122411_rIgG_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 520 2.97 0.00 0 43 100 2 651.33496 1301.66265 3.25 27.03 2032 2032 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.97 0.00 1 5 100 2 532.81055 1064.61382 3.67 23.63 1890 1890 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.96 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.16 1623 1623 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 2.96 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.39 1586 1586 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 572 2.96 0.00 0 23 100 2 515.30249 1029.59770 3.65 36.54 3460 3460 MS2 15/16 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.95 0.00 1 33 100 3 460.58240 1379.73264 3.51 35.92 3894 3894 MS2 23/40 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 574 2.95 0.00 0 20 100 2 515.30249 1029.59770 3.65 37.20 3443 3443 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 624 2.94 0.00 0 26 100 2 515.30243 1029.59758 3.54 36.25 3953 3953 MS2 15/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 340 2.94 0.00 0 18 25 2 651.33527 1301.66326 3.72 25.75 1843 1843 MS2 18/22 Linfeng_122411_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.94 0.00 1 4 100 2 532.81036 1064.61345 3.32 24.78 1581 1581 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 312 2.93 0.00 1 1 100 2 532.81091 1064.61455 4.36 23.62 1614 1614 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 538 2.93 0.00 0 21 100 2 651.33417 1301.66106 2.03 28.86 2407 2407 MS2 17/22 Linfeng_20120130_CHD1_4.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 297 2.92 0.00 0 12 25 2 610.80334 1220.59941 -0.92 3.40 311 311 MS2 17/20 Linfeng_122411_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 2.92 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.18 1561 1561 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 516 2.91 0.00 0 64 100 2 651.33545 1301.66362 4.00 27.24 1873 1873 MS2 17/22 Linfeng_20120130_CHD1_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 582 2.91 0.00 0 25 100 2 515.30261 1029.59795 3.89 36.97 3402 3402 MS2 15/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 296 2.91 0.00 1 4 100 2 532.81085 1064.61443 4.24 23.33 1578 1578 MS2 14/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 583 2.91 0.00 0 28 100 2 515.30255 1029.59783 3.77 37.16 3436 3436 MS2 15/16 Linfeng_20120130_CHD1_3.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.90 0.00 0 36 25 2 639.79510 1278.58293 -2.09 21.41 2244 2244 MS2 21/28 Linfeng_091311_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 316 2.90 0.00 1 7 100 2 532.81097 1064.61467 4.47 24.70 1583 1583 MS2 13/16 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 36 100 2 532.81061 1064.61394 3.78 23.80 1579 1579 MS2 15/16 Linfeng_20120130_CHD1_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 2.90 0.00 0 33 25 2 639.79437 1278.58147 -3.24 21.52 2221 2221 MS2 21/28 Linfeng_091311_rIgG_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 512 2.89 0.00 1 42 100 3 460.58234 1379.73246 3.37 36.47 3998 3998 MS2 21/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 2.88 0.00 1 3 100 2 532.81055 1064.61382 3.67 23.89 1639 1639 MS2 14/16 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.88 0.00 1 22 100 3 460.58252 1379.73301 3.77 36.04 3913 3913 MS2 22/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.87 0.00 1 5 100 2 532.81012 1064.61296 2.87 25.38 1759 1759 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 315 2.86 0.00 1 2 100 2 532.81122 1064.61516 4.93 25.44 1813 1813 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.86 0.00 1 4 100 2 532.81036 1064.61345 3.32 23.48 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 346 2.85 0.00 0 4 25 2 651.33386 1301.66045 1.56 25.38 2359 2359 MS2 19/22 Linfeng_122411_rIgG_6.raw High TEELNKEVASNSELVQSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 590 2.84 0.00 1 10 100 3 707.35547 2120.05185 2.44 27.91 1897 1897 MS2 21/72 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 331 2.83 0.00 1 1 100 2 532.81055 1064.61382 3.67 24.44 1692 1692 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 2.83 0.00 1 2 100 2 532.81061 1064.61394 3.78 23.75 1625 1625 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 340 2.82 0.00 1 11 100 2 532.81012 1064.61296 2.87 25.17 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 615 2.81 0.00 0 19 100 2 515.30200 1029.59673 2.71 36.95 3030 3030 MS2 15/16 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.80 0.00 1 21 100 2 532.81006 1064.61284 2.75 24.34 1640 1640 MS2 13/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 506 2.78 0.00 0 55 100 2 651.33496 1301.66265 3.25 26.61 1960 1960 MS2 15/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 308 2.78 0.00 0 6 25 2 651.33063 1301.65398 -3.41 27.08 2999 2999 MS2 19/22 Linfeng_091311_rIgG_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 490 2.78 0.00 0 49 100 2 651.33441 1301.66155 2.41 24.79 1787 1787 MS2 13/22 Linfeng_20120130_CHD1_5.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 263 2.78 0.00 0 18 25 2 669.83447 1338.66167 -2.39 24.95 2711 2711 MS2 20/26 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 620 2.78 0.00 0 21 100 2 515.30231 1029.59734 3.30 37.17 4005 4005 MS2 15/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.78 0.00 1 18 100 2 532.80981 1064.61235 2.29 23.32 1845 1845 MS2 13/16 Linfeng_20120130_CHD1_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 360 2.76 0.00 0 20 25 2 651.33459 1301.66191 2.69 20.48 1702 1702 MS2 17/22 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 311 2.76 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.08 1551 1551 MS2 13/16 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 20 25 2 651.33075 1301.65422 -3.22 27.05 3018 3018 MS2 19/22 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 2.76 0.00 1 26 100 2 532.81055 1064.61382 3.67 24.38 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.75 0.00 1 25 100 2 532.81055 1064.61382 3.67 23.97 1684 1684 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.74 0.00 1 31 100 2 532.81006 1064.61284 2.75 24.29 1849 1849 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.72 0.00 1 9 100 2 532.81030 1064.61333 3.21 24.75 1710 1710 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 621 2.71 0.00 0 24 100 2 515.30182 1029.59636 2.35 36.91 3019 3019 MS2 15/16 Linfeng_20120130_CHD1_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 586 2.71 0.00 1 12 100 2 690.36877 1379.73027 1.79 36.50 3449 3449 MS2 16/20 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 515 2.71 0.00 1 35 100 3 460.58221 1379.73209 3.11 36.40 3984 3984 MS2 21/40 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 651.33057 1301.65386 -3.50 26.83 2996 2996 MS2 19/22 Linfeng_091311_rIgG_4.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 448 2.69 0.00 0 15 100 2 669.83765 1338.66802 2.35 24.50 1991 1991 MS2 16/26 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.69 0.00 1 7 100 2 532.81024 1064.61321 3.10 23.64 1498 1498 MS2 13/16 Linfeng_20120130_CHD1_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 502 2.69 0.00 0 31 100 2 651.32867 1301.65007 -6.41 29.18 2376 2376 MS2 16/22 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.69 0.00 1 23 100 3 460.58240 1379.73264 3.51 36.10 3924 3924 MS2 22/40 Linfeng_20120130_CHD1_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.68 0.00 1 38 100 2 532.81042 1064.61357 3.44 25.01 1914 1914 MS2 13/16 Linfeng_20120130_CHD1_8.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 321 2.68 0.00 0 21 25 2 669.83508 1338.66289 -1.48 25.13 2761 2761 MS2 18/26 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 294 2.67 0.00 1 1 100 2 532.81067 1064.61406 3.90 24.90 1590 1590 MS2 13/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.67 0.00 1 22 100 2 532.81042 1064.61357 3.44 25.54 1806 1806 MS2 13/16 Linfeng_20120130_CHD1_4.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 17 25 2 639.79437 1278.58147 -3.24 21.53 2231 2231 MS2 22/28 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 2.66 0.00 1 6 100 2 532.81012 1064.61296 2.87 23.57 1492 1492 MS2 14/16 Linfeng_20120130_CHD1_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 508 2.64 0.00 0 37 100 2 651.33435 1301.66142 2.31 25.68 2134 2134 MS2 16/22 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 344 2.64 0.00 0 31 25 2 651.33484 1301.66240 3.07 25.70 1945 1945 MS2 18/22 Linfeng_122411_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.63 0.00 1 33 100 2 532.80994 1064.61260 2.52 23.82 1815 1815 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 464 2.62 0.00 0 35 100 2 651.32947 1301.65166 -5.19 29.33 2626 2626 MS2 14/22 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 2.62 0.00 1 8 100 2 532.81030 1064.61333 3.21 25.05 1733 1733 MS2 13/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 443 2.60 0.00 0 31 100 2 651.32819 1301.64910 -7.16 29.12 2366 2366 MS2 15/22 Linfeng_20120130_CHD1_1.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 301 2.60 0.00 0 5 25 2 651.33014 1301.65300 -4.16 27.05 2997 2997 MS2 19/22 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.59 0.00 1 2 100 2 532.81055 1064.61382 3.67 25.71 1688 1688 MS2 13/16 Linfeng_20120130_CHD1_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.59 0.00 0 11 25 2 610.80072 1220.59416 -5.22 25.93 2871 2871 MS2 15/20 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 475 2.59 0.00 0 19 100 2 669.83704 1338.66680 1.44 24.37 1643 1643 MS2 16/26 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 320 2.59 0.00 1 24 100 2 532.81085 1064.61443 4.24 24.44 1862 1862 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.59 0.00 1 9 100 2 532.81049 1064.61370 3.55 23.74 1505 1505 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 303 2.59 0.00 1 7 100 2 532.81079 1064.61431 4.13 23.75 1912 1912 MS2 14/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.58 0.00 1 30 100 3 460.58249 1379.73291 3.71 36.00 3907 3907 MS2 21/40 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 394 2.57 0.00 0 22 25 2 651.33234 1301.65740 -0.78 25.57 2427 2427 MS2 18/22 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.57 0.00 1 37 100 2 532.81024 1064.61321 3.10 24.97 1910 1910 MS2 13/16 Linfeng_20120130_CHD1_8.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 2.57 0.00 0 9 25 2 639.79535 1278.58342 -1.71 21.35 2244 2244 MS2 21/28 Linfeng_091311_rIgG_3.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 168 2.57 0.00 0 19 25 2 639.79492 1278.58257 -2.38 21.63 2282 2282 MS2 20/28 Linfeng_091311_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 617 2.56 0.00 0 31 100 2 515.30212 1029.59697 2.94 36.77 2999 2999 MS2 14/16 Linfeng_20120130_CHD1_7.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 378 2.56 0.00 0 26 25 2 651.33429 1301.66130 2.22 25.71 2229 2229 MS2 18/22 Linfeng_122411_rIgG_2.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 434 2.56 0.00 0 14 100 2 548.77100 1096.53472 3.39 45.08 5959 5959 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 608 2.56 0.00 0 36 100 2 515.30212 1029.59697 2.94 36.71 2988 2988 MS2 15/16 Linfeng_20120130_CHD1_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.55 0.00 1 22 100 2 532.81012 1064.61296 2.87 25.25 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 303 2.55 0.00 0 3 25 2 651.33014 1301.65300 -4.16 26.78 3033 3033 MS2 19/22 Linfeng_091311_rIgG_2.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 266 2.55 0.00 0 19 25 2 669.83459 1338.66191 -2.21 24.99 2687 2687 MS2 19/26 Linfeng_091311_rIgG_5.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 4 100 2 548.77063 1096.53398 2.72 45.41 5486 5486 MS2 13/16 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 339 2.54 0.00 1 28 100 2 532.81061 1064.61394 3.78 25.65 1820 1820 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 318 2.54 0.00 0 10 12 2 651.33173 1301.65618 -1.72 4.31 474 474 MS2 19/22 Linfeng_122411_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 441 2.54 0.00 0 44 100 2 651.32831 1301.64934 -6.97 29.37 2405 2405 MS2 15/22 Linfeng_20120130_CHD1_1.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.52 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.01 1827 1827 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 364 2.52 0.00 0 23 25 2 651.33282 1301.65837 -0.03 25.78 2164 2164 MS2 17/22 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 322 2.51 0.00 1 44 100 2 593.35254 1185.69780 2.31 41.52 4977 4977 MS2 14/18 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.50 0.00 1 42 100 2 532.81000 1064.61272 2.64 23.56 1795 1795 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 293 2.50 0.00 0 25 25 2 651.33051 1301.65373 -3.59 26.95 2953 2953 MS2 19/22 Linfeng_091311_rIgG_5.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 575 2.49 0.00 1 45 100 3 460.58267 1379.73346 4.10 36.69 4044 4044 MS2 22/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.49 0.00 1 29 100 2 532.81012 1064.61296 2.87 24.73 1888 1888 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 2.48 0.00 1 29 100 2 532.81079 1064.61431 4.13 24.41 1859 1859 MS2 13/16 Linfeng_20120130_CHD1_8.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 548 2.46 0.00 0 31 100 2 646.82556 1292.64385 2.73 40.51 4938 4938 MS2 13/20 Linfeng_20120130_CHD1_10.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 458 2.45 0.00 0 19 100 2 669.83746 1338.66765 2.08 24.30 1637 1637 MS2 15/26 Linfeng_20120130_CHD1_4.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.45 0.00 0 19 25 2 610.80090 1220.59453 -4.92 25.92 2878 2878 MS2 15/20 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 308 2.42 0.00 0 15 25 2 651.33057 1301.65386 -3.50 26.92 3105 3105 MS2 19/22 Linfeng_091311_rIgG_10.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 502 2.42 0.00 0 12 100 2 545.77045 1090.53362 2.38 20.76 1347 1347 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 303 2.42 0.00 0 23 25 2 651.33026 1301.65325 -3.97 26.68 2984 2984 MS2 19/22 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 309 2.41 0.00 0 5 25 2 610.80035 1220.59343 -5.82 26.19 2904 2904 MS2 17/20 Linfeng_091311_rIgG_6.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 517 2.40 0.00 0 50 100 2 651.33539 1301.66350 3.91 27.47 1845 1845 MS2 16/22 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 546 2.40 0.00 0 29 100 2 646.82629 1292.64531 3.86 40.49 4781 4781 MS2 13/20 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 317 2.38 0.00 0 20 100 2 548.77087 1096.53447 3.16 44.92 5689 5689 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 291 2.37 0.00 0 58 25 2 610.80304 1220.59880 -1.42 25.77 2584 2584 MS2 16/20 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 224 2.36 0.00 0 13 25 2 548.76978 1096.53227 1.16 36.55 3238 3238 MS2 14/16 Linfeng_122411_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.35 0.00 1 27 100 2 532.81036 1064.61345 3.32 24.10 1833 1833 MS2 14/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 548 2.35 0.00 0 39 100 2 646.82660 1292.64592 4.34 40.34 4910 4910 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 407 2.33 0.00 0 31 100 2 553.76770 1106.52812 1.98 13.15 884 884 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ALEEANADLEVK Unambiguous 18 2 IPI00384444.6;IPI00217963.3 CID 1.0000 0.0000 1 1 293 2.32 0.00 0 70 25 2 651.32861 1301.64995 -6.50 27.21 3055 3055 MS2 15/22 Linfeng_091311_rIgG_3.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 445 2.31 0.00 0 13 100 2 553.76831 1106.52934 3.08 13.00 858 858 MS2 13/16 Linfeng_20120130_CHD1_1.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 459 2.30 0.00 0 5 100 2 669.83771 1338.66814 2.44 24.37 1974 1974 MS2 18/26 Linfeng_20120130_CHD1_10.raw High EVFTSSSSSSSR Unambiguous 2 1 IPI00217963.3 CID 1.0000 0.0000 1 1 107 2.30 0.00 0 48 25 2 630.78699 1260.56670 -2.85 18.47 1796 1796 MS2 15/22 Linfeng_091311_rIgG_9.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.29 0.00 0 24 25 2 639.79449 1278.58171 -3.04 21.68 2260 2260 MS2 20/28 Linfeng_091311_rIgG_7.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.28 0.00 1 32 100 2 532.81030 1064.61333 3.21 24.69 1885 1885 MS2 11/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 325 2.25 0.00 0 13 25 2 610.80060 1220.59392 -5.42 25.83 2902 2902 MS2 17/20 Linfeng_091311_rIgG_2.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 282 2.25 0.00 0 35 25 2 610.80206 1220.59685 -3.02 26.01 2854 2854 MS2 16/20 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 506 2.25 0.00 0 11 100 2 545.77045 1090.53362 2.38 18.30 1178 1178 MS2 15/16 Linfeng_20120130_CHD1_4.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 429 2.24 0.00 0 11 100 2 548.77124 1096.53520 3.83 45.33 5802 5802 MS2 13/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.24 0.00 0 27 25 2 639.79425 1278.58122 -3.43 21.61 2318 2318 MS2 21/28 Linfeng_091311_rIgG_8.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 301 2.24 0.00 0 41 25 2 610.80115 1220.59502 -4.52 26.18 2875 2875 MS2 16/20 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 325 2.22 0.00 1 4 100 2 532.81006 1064.61284 2.75 23.69 1506 1506 MS2 12/16 Linfeng_20120130_CHD1_2.raw High QTVEADVNGLRR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 612 2.22 0.00 1 12 100 2 679.36566 1357.72405 4.22 30.37 2881 2881 MS2 11/22 Linfeng_20120130_CHD1_10.raw High DAETWFLSK Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 413 2.21 0.00 0 32 100 2 548.77118 1096.53508 3.72 45.08 5894 5894 MS2 13/16 Linfeng_20120130_CHD1_10.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 534 2.20 0.00 0 6 100 2 646.82574 1292.64421 3.01 41.06 5045 5045 MS2 15/20 Linfeng_20120130_CHD1_10.raw High ISSVLAGGScR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.20 0.00 0 27 25 2 553.78314 1106.55901 -3.00 23.20 2467 2467 MS2 19/20 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.17 0.00 1 14 100 2 532.80988 1064.61247 2.41 23.71 1639 1639 MS2 12/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 2.16 0.00 1 37 100 2 532.81018 1064.61308 2.98 24.87 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_8.raw High GScGIGGGIGGGSSR Unambiguous 5 2 IPI00217963.3;IPI00384444.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.15 0.00 0 48 25 2 639.79504 1278.58281 -2.19 19.47 1727 1727 MS2 20/28 Linfeng_091311_rIgG_1.raw High APSTYGGGLSVSSR Unambiguous 1 1 IPI00217963.3 CID 1.0000 0.0000 1 1 341 2.14 0.00 0 41 25 2 669.83362 1338.65996 -3.67 24.81 2460 2460 MS2 17/26 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High ASLENSLEETK Unambiguous 5 2 IPI00217963.3;IPI00384444.6 CID 1.0000 0.0000 1 1 324 2.08 0.00 0 57 25 2 610.80389 1220.60051 -0.02 24.24 2203 2203 MS2 15/20 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High LASYLDK Unambiguous 22 5 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00019359.4 CID 1.0000 0.0000 1 1 244 2.01 0.00 0 28 100 2 405.22485 809.44243 2.54 21.37 1394 1394 MS2 10/12 Linfeng_20120130_CHD1_4.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 550 2.01 0.00 0 38 100 2 646.82593 1292.64458 3.30 40.38 4762 4762 MS2 14/20 Linfeng_20120130_CHD1_4.raw IPI00025039.1 rRNA 2'-O-methyltransferase fibrillarin 49.22 1 10 10 20 26.39 27.10 5 9 17.51 26.79 6 6 11.10 13.71 3 5 321 33.8 10.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 238 3.88 0.00 0 12 25 4 854.94049 3416.74013 -2.49 44.16 5210 5210 MS2 57/192 Linfeng_091311_rIgG_7.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 290 3.66 0.00 0 29 14 3 511.95630 1533.85434 0.43 4.38 482 482 MS2 28/52 Linfeng_122411_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 350 3.27 0.00 0 20 25 3 511.95465 1533.84940 -2.80 23.44 2529 2529 MS2 29/52 Linfeng_091311_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 363 3.16 0.00 0 6 25 3 511.95477 1533.84977 -2.56 23.50 2512 2512 MS2 29/52 Linfeng_091311_rIgG_7.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 304 2.99 0.00 1 1 25 2 755.87347 1510.73967 0.81 24.48 2235 2235 MS2 19/24 Linfeng_122411_rIgG_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 72 2.99 0.00 0 3 15 4 468.78073 1872.10109 -2.97 32.90 3795 3795 MS2 44/108 Linfeng_091311_rIgG_6.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 72 2.95 0.00 0 12 25 4 468.78076 1872.10122 -2.90 32.93 3788 3788 MS2 40/108 Linfeng_091311_rIgG_7.raw Medium LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 57 2.94 0.00 0 12 25 4 468.78253 1872.10830 0.88 32.01 3234 3234 MS2 38/108 Linfeng_122411_rIgG_6.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 274 2.77 0.00 1 4 25 2 755.86871 1510.73015 -5.49 26.02 2853 2853 MS2 17/24 Linfeng_091311_rIgG_7.raw High VSISEGDDKIEYR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 529 2.69 0.00 1 3 100 2 755.87500 1510.74272 2.83 25.40 1755 1755 MS2 17/24 Linfeng_20120130_CHD1_6.raw High ANcIDSTASAEAVFASEVK Unambiguous 1 1 IPI00025039.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.65 0.00 0 24 25 2 985.46307 1969.91887 0.83 36.25 3767 3767 MS2 13/36 Linfeng_122411_rIgG_6.raw High LAAAILGGVDQIHIKPGAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 70 2.65 0.00 0 6 25 3 624.70502 1872.10050 -3.29 32.98 3795 3795 MS2 28/72 Linfeng_091311_rIgG_7.raw High IVALNAHTFLR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 186 2.64 0.00 0 22 25 2 627.87079 1254.73430 2.02 31.47 3165 3165 MS2 17/20 Linfeng_122411_rIgG_6.raw High SGRDLINLAK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 593 2.62 0.00 1 19 19 3 362.88025 1086.62619 -0.41 24.54 2244 2244 MS2 21/36 Linfeng_122411_rIgG_6.raw High DHAVVVGVYRPPPK Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 1 352 2.60 0.00 0 31 25 3 511.95508 1533.85068 -1.96 23.62 2526 2526 MS2 19/52 Linfeng_091311_rIgG_9.raw High TNIIPVIEDAR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 2 343 2.15 0.00 0 29 100 2 620.85162 1240.69597 5.10 41.82 3809 3809 MS2 13/20 Linfeng_20120130_CHD1_7.raw High TNIIPVIEDAR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 2 322 2.13 0.00 0 22 100 2 620.85016 1240.69304 2.74 41.63 3623 3623 MS2 12/20 Linfeng_20120130_CHD1_6.raw High HEGVFIcR Unambiguous 1 1 IPI00025039.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 237 2.12 0.00 0 7 25 2 509.24896 1017.49065 -2.81 22.77 2411 2411 MS2 13/14 Linfeng_091311_rIgG_7.raw High TNIIPVIEDAR Unambiguous 1 1 IPI00025039.1 CID 1.0000 0.0000 1 2 327 2.10 0.00 0 6 100 2 620.85089 1240.69451 3.92 41.79 3646 3646 MS2 13/20 Linfeng_20120130_CHD1_6.raw High mLIAmVDVIFADVAQPDQTR Unambiguous 1 1 IPI00025039.1 M1(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 491 2.03 0.00 0 25 100 2 1133.06189 2265.11650 -3.97 55.19 5838 5838 MS2 9/38 Linfeng_20120130_CHD1_6.raw IPI00411937.4 Nucleolar protein 56 48.99 6 21 21 46 56.46 33.50 15 20 26.51 19.70 9 10 56.37 17.51 7 16 594 66.0 9.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EAMVQAEEAAAEITR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 471 4.83 0.00 0 19 100 2 809.89471 1618.78215 4.91 41.06 4895 4895 MS2 22/28 Linfeng_20120130_CHD1_4.raw High LAALALASSENSSSTPEEcEEmSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl); M22(Oxidation) CID 1.0000 0.0000 1 1 263 4.62 0.00 1 0 100 3 971.11627 2911.33426 5.42 32.70 3193 3193 MS2 33/104 Linfeng_20120130_CHD1_4.raw High LVAFcPFASSQVALENANAVSEGVVHEDLR Unambiguous 4 1 IPI00411937.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 210 4.44 0.00 0 24 25 4 808.15271 3229.58901 -1.79 45.19 5372 5372 MS2 48/174 Linfeng_091311_rIgG_4.raw High LAALALASSENSSSTPEEcEEmSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl); M22(Oxidation) CID 1.0000 0.0000 1 1 254 4.30 0.00 1 0 100 3 971.11536 2911.33152 4.48 32.79 3212 3212 MS2 27/104 Linfeng_20120130_CHD1_4.raw High EAmVQAEEAAAEITR Unambiguous 5 1 IPI00411937.4 M3(Oxidation) CID 1.0000 0.0000 1 1 375 4.24 0.00 0 29 100 2 817.89154 1634.77580 4.09 31.39 2911 2911 MS2 21/28 Linfeng_20120130_CHD1_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 210 4.19 0.00 0 18 25 2 1177.12683 2353.24639 -1.46 46.43 5528 5528 MS2 20/40 Linfeng_091311_rIgG_4.raw High EAMVQAEEAAAEITR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 483 4.19 0.00 0 42 100 2 809.89423 1618.78118 4.30 41.35 4951 4951 MS2 22/28 Linfeng_20120130_CHD1_4.raw High IGAAIQEELGYNcQTGGVIAEILR Unambiguous 4 1 IPI00411937.4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 330 3.98 0.00 0 31 25 3 859.11078 2575.31778 -0.31 46.23 5503 5503 MS2 34/92 Linfeng_091311_rIgG_4.raw High LAALALASSENSSSTPEEcEEmSEKPK Unambiguous 2 1 IPI00411937.4 C19(Carbamidomethyl); M22(Oxidation) CID 1.0000 0.0000 1 1 235 3.97 0.00 1 12 100 3 971.11377 2911.32676 2.85 32.83 3222 3222 MS2 26/104 Linfeng_20120130_CHD1_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 3.79 0.00 0 9 100 2 857.90704 1714.80681 4.35 45.69 5882 5882 MS2 17/28 Linfeng_20120130_CHD1_4.raw High LVAFcPFASSQVALENANAVSEGVVHEDLR Unambiguous 4 1 IPI00411937.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.64 0.00 0 5 25 3 1077.20264 3229.59336 -0.45 45.18 5371 5371 MS2 34/116 Linfeng_091311_rIgG_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 272 3.57 0.00 0 6 25 3 785.09106 2353.25864 3.75 45.22 4846 4846 MS2 28/80 Linfeng_122411_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 3.57 0.00 0 15 100 2 857.90662 1714.80596 3.85 46.11 5975 5975 MS2 18/28 Linfeng_20120130_CHD1_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 548 3.40 0.00 0 22 100 2 688.87665 1376.74602 2.87 34.40 3581 3581 MS2 19/24 Linfeng_20120130_CHD1_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 331 3.27 0.00 0 0 25 3 470.92145 1410.74979 -2.20 36.12 4226 4226 MS2 24/44 Linfeng_091311_rIgG_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 302 3.26 0.00 0 11 25 3 470.92340 1410.75565 1.96 35.34 3601 3601 MS2 26/44 Linfeng_122411_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 344 3.17 0.00 0 8 100 2 857.90747 1714.80766 4.85 45.81 5905 5905 MS2 16/28 Linfeng_20120130_CHD1_4.raw High YGLIFHSTFIGR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 327 3.08 0.00 0 0 25 3 470.92093 1410.74823 -3.30 36.39 4202 4202 MS2 25/44 Linfeng_091311_rIgG_5.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 281 3.07 0.00 0 11 25 3 785.08710 2353.24674 -1.31 46.41 5525 5525 MS2 28/80 Linfeng_091311_rIgG_4.raw High EVEEISLLQPQVEESVLNLGK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 272 3.05 0.00 0 26 25 3 785.08691 2353.24619 -1.54 46.64 5528 5528 MS2 24/80 Linfeng_091311_rIgG_6.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 608 3.03 0.00 0 25 100 2 688.87549 1376.74370 1.19 34.39 3812 3812 MS2 17/24 Linfeng_20120130_CHD1_5.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 422 2.99 0.00 0 4 22 2 688.87555 1376.74382 1.28 29.42 2840 2840 MS2 22/24 Linfeng_122411_rIgG_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 452 2.94 0.00 0 17 100 2 656.33441 1311.66155 2.71 39.35 4960 4960 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LIAHAGSLTNLAK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 173 2.89 0.00 0 11 100 3 436.92725 1308.76719 2.84 32.48 3142 3142 MS2 23/48 Linfeng_20120130_CHD1_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 278 2.85 0.00 0 5 25 2 656.33411 1311.66094 2.25 32.61 3255 3255 MS2 18/20 Linfeng_122411_rIgG_4.raw High IINDNATYcR Unambiguous 4 1 IPI00411937.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 164 2.77 0.00 0 1 25 2 620.29144 1239.57561 -2.48 21.16 2209 2209 MS2 17/18 Linfeng_091311_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 382 2.75 0.00 0 6 22 2 688.87268 1376.73808 -2.89 30.89 3546 3546 MS2 22/24 Linfeng_091311_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 166 2.67 0.00 0 8 25 2 857.90521 1714.80315 2.22 37.14 3830 3830 MS2 18/28 Linfeng_122411_rIgG_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 491 2.65 0.00 0 14 100 2 656.33484 1311.66240 3.36 39.48 4587 4587 MS2 17/20 Linfeng_20120130_CHD1_4.raw High MSQVAPSLSALIGEAVGAR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 355 2.59 0.00 0 31 25 3 619.66998 1856.99540 2.92 46.00 4944 4944 MS2 29/72 Linfeng_122411_rIgG_4.raw High LLLETHLPSK Unambiguous 3 1 IPI00411937.4 CID 1.0000 0.0000 1 1 162 2.58 0.00 0 22 100 2 575.84662 1150.68596 2.50 35.28 3768 3768 MS2 11/18 Linfeng_20120130_CHD1_4.raw High FSKEEPVSSGPEEAVGK Unambiguous 1 1 IPI00411937.4 CID 1.0000 0.0000 1 1 301 2.53 0.00 1 17 25 3 592.95850 1776.86094 -2.36 22.49 2395 2395 MS2 25/64 Linfeng_091311_rIgG_4.raw High IDcFSEVPTSVFGEK Unambiguous 5 1 IPI00411937.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 160 2.35 0.00 0 39 25 2 857.90125 1714.79521 -2.41 38.22 4494 4494 MS2 16/28 Linfeng_091311_rIgG_4.raw High ELNEDKLEK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 433 2.26 0.00 1 24 25 2 559.28876 1117.57024 -3.01 18.25 1800 1800 MS2 13/16 Linfeng_091311_rIgG_4.raw High LSFYETGEIPR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 293 2.24 0.00 0 33 25 2 656.33130 1311.65532 -2.04 33.79 3924 3924 MS2 18/20 Linfeng_091311_rIgG_4.raw High GLTDLSAcK Unambiguous 4 1 IPI00411937.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.23 0.00 0 11 25 2 482.74075 964.47423 -2.72 25.16 2769 2769 MS2 14/16 Linfeng_091311_rIgG_4.raw High YPASTVQILGAEK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 460 2.23 0.00 0 38 25 2 688.87604 1376.74480 1.99 29.40 2722 2722 MS2 15/24 Linfeng_122411_rIgG_2.raw High LIAHAGSLTNLAK Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 159 2.22 0.00 0 46 100 2 654.88776 1308.76824 3.64 32.51 3150 3150 MS2 14/24 Linfeng_20120130_CHD1_4.raw High VLLGVGDPK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 110 2.18 0.00 0 35 25 2 449.27457 897.54186 1.57 24.41 2171 2171 MS2 13/16 Linfeng_122411_rIgG_4.raw High VVSLSEYR Unambiguous 5 1 IPI00411937.4 CID 1.0000 0.0000 1 1 198 2.18 0.00 0 5 18 2 476.75671 952.50615 -3.88 26.26 2918 2918 MS2 12/14 Linfeng_091311_rIgG_4.raw High GLTDLSAcK Unambiguous 4 1 IPI00411937.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 304 2.16 0.00 0 39 16 2 482.74054 964.47380 -3.17 4.34 501 501 MS2 11/16 Linfeng_122411_rIgG_4.raw High EEPVSSGPEEAVGK Unambiguous 1 1 IPI00411937.4 CID 1.0000 0.0000 1 1 159 2.16 0.00 0 3 25 2 707.83594 1414.66460 -3.61 21.96 2321 2321 MS2 18/26 Linfeng_091311_rIgG_4.raw High AQLGLGHSYSR Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 403 2.13 0.00 0 15 25 2 594.80829 1188.60930 -2.30 21.75 2292 2292 MS2 16/20 Linfeng_091311_rIgG_4.raw High VLLGVGDPK Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 112 2.08 0.00 0 14 25 2 449.27289 897.53850 -2.17 27.72 3119 3119 MS2 14/16 Linfeng_091311_rIgG_4.raw High IINDNATYcR Unambiguous 4 1 IPI00411937.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 153 2.07 0.00 0 29 25 2 620.29144 1239.57561 -2.48 21.46 2260 2260 MS2 15/18 Linfeng_091311_rIgG_6.raw High LAQFIGNR Unambiguous 4 1 IPI00411937.4 CID 1.0000 0.0000 1 1 493 2.00 0.00 0 12 25 2 459.76013 918.51299 -2.87 4.82 570 570 MS2 11/14 Linfeng_122411_rIgG_4.raw IPI00179700.3 Isoform HMG-I of High mobility group protein HMG-I/HMG-Y 48.60 6 6 6 13 42.71 48.60 6 13 107 11.7 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLEKEEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 74 4.85 0.00 2 7 25 2 1118.99841 2236.98955 -2.01 20.76 2241 2241 MS2 22/36 Linfeng_091311_rIgG_10.raw High LEKEEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 36 4.48 0.00 1 0 25 2 1054.95056 2108.89385 -2.48 22.33 2460 2460 MS2 21/34 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 11 4.20 0.00 0 3 25 2 869.84003 1738.67278 -2.68 22.06 2306 2306 MS2 22/28 Linfeng_091311_rIgG_9.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 86 3.60 0.00 2 2 7 3 746.33551 2236.99198 -0.92 20.71 2234 2234 MS2 32/72 Linfeng_091311_rIgG_10.raw High EEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 10 3.38 0.00 0 1 25 2 869.84070 1738.67412 -1.90 21.87 2396 2396 MS2 23/28 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQKEPSEVPTPK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 242 3.12 0.00 2 3 25 4 640.34760 2558.36855 -5.48 26.03 2982 2982 MS2 36/144 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 272 3.12 0.00 1 9 25 3 531.96753 1593.88803 -4.97 22.90 2541 2541 MS2 29/60 Linfeng_091311_rIgG_10.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 248 3.11 0.00 1 10 25 3 531.96875 1593.89170 -2.68 23.97 2689 2689 MS2 28/60 Linfeng_091311_rIgG_10.raw High KLEKEEEEGISQESSEEEQ Unambiguous 3 1 IPI00179700.3 CID 1.0000 0.0000 1 1 90 2.95 0.00 2 2 25 3 746.33417 2236.98795 -2.72 20.83 2132 2132 MS2 32/72 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 274 2.71 0.00 1 35 25 3 531.96716 1593.88694 -5.66 23.06 2446 2446 MS2 21/60 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 227 2.69 0.00 1 0 25 2 797.44965 1593.89202 -2.48 23.28 2478 2478 MS2 17/30 Linfeng_091311_rIgG_9.raw High KQPPVSPGTALVGSQK Unambiguous 4 1 IPI00179700.3 CID 1.0000 0.0000 1 1 209 2.49 0.00 1 4 25 2 797.44995 1593.89263 -2.09 23.00 2556 2556 MS2 18/30 Linfeng_091311_rIgG_10.raw High SSQPLASK Unambiguous 5 1 IPI00179700.3 CID 1.0000 0.0000 1 1 584 2.02 0.00 0 7 25 2 409.22400 817.44072 -0.88 4.98 512 512 MS2 12/14 Linfeng_091311_rIgG_10.raw IPI00021405.3 Isoform A of Lamin-A/C 48.34 12 28 29 48 66.81 41.27 22 24 52.49 25.60 16 19 18.95 11.14 4 5 664 74.1 7.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 573 4.54 0.00 0 5 100 3 789.06030 2365.16635 3.07 24.76 1694 1694 MS2 35/104 Linfeng_20120130_CHD1_4.raw High ASASGSGAQVGGPISSGSSASSVTVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 280 4.29 0.00 0 3 25 3 789.05408 2365.14768 -4.83 26.03 2885 2885 MS2 42/104 Linfeng_091311_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 425 4.27 0.00 0 16 100 2 783.88184 1566.75640 3.60 29.88 2600 2600 MS2 19/32 Linfeng_20120130_CHD1_4.raw High AQHEDQVEQYKK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 266 3.91 0.00 1 7 25 3 501.57910 1502.72275 -0.46 14.57 1280 1280 MS2 27/44 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 293 3.81 0.00 0 8 25 2 876.92944 1752.85161 -6.17 26.49 2949 2949 MS2 22/30 Linfeng_091311_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 262 3.78 0.00 0 2 25 2 783.88116 1566.75505 2.74 27.17 2541 2541 MS2 22/32 Linfeng_122411_rIgG_4.raw High TALINSTGEEVAMR Unambiguous 8 1 IPI00021405.3 CID 1.0000 0.0000 1 1 635 3.69 0.00 0 5 100 2 746.38031 1491.75334 4.08 31.45 2925 2925 MS2 18/26 Linfeng_20120130_CHD1_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 439 3.63 0.00 0 6 25 3 477.60077 1430.78775 1.93 33.61 3383 3383 MS2 29/48 Linfeng_122411_rIgG_4.raw High SVGGSGGGSFGDNLVTR Unambiguous 5 1 IPI00021405.3 CID 1.0000 0.0000 1 1 221 3.51 0.00 0 15 25 2 783.87781 1566.74834 -1.55 29.02 3296 3296 MS2 22/32 Linfeng_091311_rIgG_4.raw High IRIDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 191 3.47 0.00 1 9 25 3 567.32977 1699.97477 2.70 35.07 3568 3568 MS2 29/56 Linfeng_122411_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 524 3.42 0.00 0 16 100 2 876.93811 1752.86894 3.72 30.52 2735 2735 MS2 17/30 Linfeng_20120130_CHD1_4.raw High LRITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 472 3.42 0.00 1 68 25 3 473.25989 1417.76511 0.36 23.98 2113 2113 MS2 20/44 Linfeng_122411_rIgG_4.raw High SGAQASSTPLSPTR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 382 3.39 0.00 0 13 25 2 680.34595 1359.68462 -1.27 20.50 2120 2120 MS2 20/26 Linfeng_091311_rIgG_4.raw High AGQVVTIWAAGAGATHSPPTDLVWK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 312 3.34 0.00 0 18 25 3 845.10944 2533.31375 -2.43 39.51 4657 4657 MS2 34/96 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 352 3.32 0.00 0 1 4 3 584.95758 1752.85819 -2.41 4.23 484 484 MS2 27/60 Linfeng_122411_rIgG_4.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 464 3.16 0.00 0 14 22 2 514.79120 1028.57512 1.54 29.61 2865 2865 MS2 15/16 Linfeng_122411_rIgG_4.raw High IDSLSAQLSQLQK Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 409 3.10 0.00 0 15 21 2 715.89417 1430.78105 -2.75 34.73 4046 4046 MS2 18/24 Linfeng_091311_rIgG_4.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 388 3.07 0.00 0 25 25 3 584.95959 1752.86423 1.03 25.40 2362 2362 MS2 17/60 Linfeng_122411_rIgG_6.raw High LADALQELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 377 3.05 0.00 0 5 22 2 514.78882 1028.57036 -3.09 31.20 3586 3586 MS2 15/16 Linfeng_091311_rIgG_4.raw High TALINSTGEEVAmR Unambiguous 8 1 IPI00021405.3 M13(Oxidation) CID 1.0000 0.0000 1 1 564 3.03 0.00 0 5 100 2 754.37708 1507.74687 3.12 24.16 1624 1624 MS2 14/26 Linfeng_20120130_CHD1_4.raw High ITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 377 2.89 0.00 0 4 14 2 574.79193 1148.57659 -2.46 20.88 2171 2171 MS2 17/18 Linfeng_091311_rIgG_4.raw High SLETENAGLR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 438 2.86 0.00 0 18 5 2 545.28052 1089.55376 0.21 3.50 367 367 MS2 17/18 Linfeng_122411_rIgG_4.raw High LRDLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 545 2.77 0.00 1 5 17 3 396.55014 1187.63587 -1.75 4.64 545 545 MS2 22/36 Linfeng_122411_rIgG_4.raw High VAVEEVDEEGK Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 185 2.73 0.00 0 13 25 2 602.28949 1203.57170 -1.92 21.62 2274 2274 MS2 18/20 Linfeng_091311_rIgG_4.raw High AQNTWGcGNSLR Unambiguous 9 1 IPI00021405.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.70 0.00 0 3 25 2 682.31061 1363.61394 -2.40 24.57 2685 2685 MS2 18/22 Linfeng_091311_rIgG_4.raw High LKDLEALLNSK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 351 2.68 0.00 1 3 23 3 415.24753 1243.72803 1.88 33.12 3320 3320 MS2 27/40 Linfeng_122411_rIgG_4.raw High ITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 376 2.62 0.00 0 0 25 2 574.79102 1148.57475 -4.05 21.05 2159 2159 MS2 14/18 Linfeng_091311_rIgG_5.raw High NSNLVGAAHEELQQSR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 335 2.59 0.00 0 9 21 3 584.95624 1752.85416 -4.71 26.37 2932 2932 MS2 24/60 Linfeng_091311_rIgG_4.raw High EDLQELNDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 137 2.57 0.00 0 11 25 2 566.26544 1131.52361 -3.63 24.27 2644 2644 MS2 15/16 Linfeng_091311_rIgG_4.raw High LKDLEALLNSK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 358 2.56 0.00 1 2 15 3 415.24533 1243.72144 -3.42 34.20 3976 3976 MS2 23/40 Linfeng_091311_rIgG_4.raw High VAVEEVDEEGKFVR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 421 2.56 0.00 1 38 25 2 803.41205 1605.81682 3.02 24.31 2158 2158 MS2 19/26 Linfeng_122411_rIgG_4.raw High ASSHSSQTQGGGSVTK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 249 2.52 0.00 0 24 25 3 506.91171 1518.72058 4.11 1.63 157 157 MS2 26/60 Linfeng_122411_rIgG_4.raw High EAALSTALSEK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 427 2.48 0.00 0 36 25 2 560.29974 1119.59221 2.64 20.22 1676 1676 MS2 14/20 Linfeng_122411_rIgG_4.raw High SLETENAGLR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 476 2.37 0.00 0 10 14 2 545.27893 1089.55058 -2.70 22.51 2398 2398 MS2 17/18 Linfeng_091311_rIgG_4.raw High TVLcGTcGQPADK Unambiguous 6 1 IPI00021405.3 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 143 2.33 0.00 0 16 25 2 703.82294 1406.63860 -1.23 20.51 2121 2121 MS2 19/24 Linfeng_091311_rIgG_4.raw High EAALSTALSEK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 518 2.28 0.00 0 35 25 2 560.29388 1119.58049 -7.82 26.52 2954 2954 MS2 16/20 Linfeng_091311_rIgG_4.raw High LAVYIDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 211 2.27 0.00 0 16 25 2 425.24588 849.48448 1.85 24.17 2139 2139 MS2 11/12 Linfeng_122411_rIgG_4.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw High LRITESEEVVSR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 486 2.20 0.00 1 58 25 2 709.38733 1417.76738 1.96 24.09 2129 2129 MS2 11/22 Linfeng_122411_rIgG_4.raw High DLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 352 2.16 0.00 0 16 25 2 459.73074 918.45421 1.59 25.02 2253 2253 MS2 13/14 Linfeng_122411_rIgG_4.raw High DLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 397 2.14 0.00 0 22 25 2 459.72894 918.45061 -2.33 27.83 3134 3134 MS2 13/14 Linfeng_091311_rIgG_4.raw High AAYEAELGDAR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 222 2.13 0.00 0 25 25 2 583.27618 1165.54509 -2.88 24.75 2711 2711 MS2 17/20 Linfeng_091311_rIgG_4.raw High LEAALGEAK Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 408 2.11 0.00 0 23 25 2 451.25201 901.49675 -2.47 21.83 2303 2303 MS2 13/16 Linfeng_091311_rIgG_4.raw High LAVYIDR Unambiguous 6 1 IPI00021405.3 CID 1.0000 0.0000 1 1 210 2.10 0.00 0 32 25 2 425.24423 849.48119 -2.03 27.54 3094 3094 MS2 11/12 Linfeng_091311_rIgG_4.raw High TALINSTGEEVAMR Unambiguous 8 1 IPI00021405.3 CID 1.0000 0.0000 1 1 423 2.07 0.00 0 10 25 2 746.37964 1491.75200 3.18 27.70 2610 2610 MS2 19/26 Linfeng_122411_rIgG_4.raw High QNGDDPLLTYR Unambiguous 9 1 IPI00021405.3 CID 1.0000 0.0000 1 1 301 2.06 0.00 0 32 25 2 646.31616 1291.62505 -2.09 30.65 3515 3515 MS2 15/20 Linfeng_091311_rIgG_4.raw High LRDLEDSLAR Unambiguous 10 1 IPI00021405.3 CID 1.0000 0.0000 1 1 544 2.06 0.00 1 10 25 2 594.32098 1187.63469 -2.74 4.76 562 562 MS2 15/18 Linfeng_122411_rIgG_4.raw High NIYSEELR Unambiguous 11 1 IPI00021405.3 CID 1.0000 0.0000 1 1 249 2.01 0.00 0 12 25 2 512.25732 1023.50737 -3.14 4.72 557 557 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00003935.6 Histone H2B type 2-E 47.62 6 3 9 85 24.52 34.92 6 8 49.13 42.06 5 17 217.29 26.98 4 60 126 13.9 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 363 5.07 0.00 0 15 37 2 872.41266 1743.81804 -0.77 48.63 6785 6785 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 321 4.93 0.00 0 23 19 2 872.41461 1743.82195 1.47 48.62 5559 5559 MS2 22/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 300 4.92 0.00 0 22 100 2 888.41290 1775.81853 5.24 10.63 907 907 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 367 4.84 0.00 0 10 100 2 872.41223 1743.81719 -1.26 48.99 6870 6870 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 305 4.69 0.00 0 45 100 2 880.41107 1759.81487 0.32 48.83 6836 6836 MS2 20/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 284 4.55 0.00 0 23 100 2 888.41315 1775.81902 5.52 11.30 711 711 MS2 20/28 Linfeng_20120130_CHD1_1.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 331 4.55 0.00 0 14 11 2 880.41205 1759.81682 1.43 48.62 5557 5557 MS2 22/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 288 4.51 0.00 0 11 74 2 888.41107 1775.81487 3.18 0.63 52 52 MS2 20/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 303 4.42 0.00 0 15 100 2 888.41193 1775.81658 4.14 0.70 69 69 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 279 4.37 0.00 0 27 100 2 888.41162 1775.81597 3.80 1.35 222 222 MS2 20/28 Linfeng_20120130_CHD1_6.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 219 4.32 0.00 0 3 25 3 581.94611 1743.82376 2.51 47.13 4850 4850 MS2 31/56 Linfeng_122411_rIgG_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 314 4.32 0.00 0 33 100 2 880.41193 1759.81658 1.29 48.85 6840 6840 MS2 23/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 301 4.21 0.00 0 21 100 2 888.41187 1775.81645 4.07 0.70 64 64 MS2 20/28 Linfeng_20120130_CHD1_9.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 312 4.21 0.00 0 47 100 2 880.41400 1759.82073 3.65 55.89 6476 6476 MS2 19/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 294 4.18 0.00 0 9 100 2 888.41211 1775.81694 4.35 1.41 246 246 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 285 4.12 0.00 0 25 100 2 888.41168 1775.81609 3.87 11.32 714 714 MS2 17/28 Linfeng_20120130_CHD1_1.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 220 4.11 0.00 0 1 25 3 581.94641 1743.82468 3.03 47.15 4735 4735 MS2 31/56 Linfeng_122411_rIgG_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 295 4.07 0.00 0 24 100 2 888.41284 1775.81841 5.17 1.16 164 164 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 278 4.05 0.00 0 18 100 2 888.41162 1775.81597 3.80 1.02 156 156 MS2 18/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 296 4.03 0.00 0 22 100 2 888.41180 1775.81633 4.00 1.67 271 271 MS2 21/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 292 4.03 0.00 0 18 100 2 888.41211 1775.81694 4.35 0.75 76 76 MS2 18/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 342 4.03 0.00 0 12 100 2 872.41364 1743.81999 0.35 49.68 5754 5754 MS2 18/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 202 4.03 0.00 0 0 25 3 581.94354 1743.81607 -1.90 48.36 5903 5903 MS2 31/56 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 243 4.02 0.00 0 12 100 2 888.40961 1775.81194 1.53 1.37 226 226 MS2 17/28 Linfeng_20120130_CHD1_7.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 196 4.02 0.00 0 10 25 2 872.41638 1743.82549 3.50 47.09 4727 4727 MS2 23/28 Linfeng_122411_rIgG_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 285 3.99 0.00 0 25 100 2 888.41089 1775.81450 2.97 1.75 330 330 MS2 18/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 257 3.98 0.00 0 18 56 2 888.40936 1775.81145 1.25 1.86 356 356 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 318 3.95 0.00 0 35 100 2 888.41272 1775.81816 5.04 1.19 195 195 MS2 20/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 299 3.94 0.00 0 31 100 2 888.41235 1775.81743 4.62 11.07 980 980 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 261 3.93 0.00 0 27 100 2 888.40991 1775.81255 1.87 0.66 62 62 MS2 22/28 Linfeng_20120130_CHD1_6.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 189 3.92 0.00 0 11 25 2 872.41315 1743.81902 -0.21 48.33 5900 5900 MS2 23/28 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 300 3.90 0.00 0 34 100 2 888.41199 1775.81670 4.21 1.13 171 171 MS2 21/28 Linfeng_20120130_CHD1_6.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 252 3.89 0.00 0 26 100 2 888.40845 1775.80962 0.22 0.64 63 63 MS2 20/28 Linfeng_20120130_CHD1_7.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 352 3.89 0.00 0 11 100 2 872.41370 1743.82012 0.42 49.63 5746 5746 MS2 18/28 Linfeng_20120130_CHD1_9.raw High HAVSEGTKAVTKYTSSK Unambiguous 14 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 406 3.86 0.00 2 54 25 4 449.23911 1793.93459 -2.60 18.28 1886 1886 MS2 30/96 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 265 3.86 0.00 0 27 72 2 888.40955 1775.81182 1.46 0.68 70 70 MS2 21/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 261 3.86 0.00 0 34 100 2 888.40973 1775.81218 1.67 0.76 93 93 MS2 21/28 Linfeng_20120130_CHD1_7.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.85 0.00 1 3 15 3 409.89600 1227.67344 3.42 2.95 239 239 MS2 27/44 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 190 3.83 0.00 0 4 25 2 872.41644 1743.82561 3.57 47.04 4839 4839 MS2 22/28 Linfeng_122411_rIgG_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 333 3.81 0.00 0 15 25 2 880.41388 1759.82048 3.51 46.93 6329 6329 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 298 3.80 0.00 0 30 100 2 888.41162 1775.81597 3.80 1.52 264 264 MS2 19/28 Linfeng_20120130_CHD1_6.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 262 3.79 0.00 0 42 73 2 888.40942 1775.81157 1.32 2.03 410 410 MS2 17/28 Linfeng_20120130_CHD1_8.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 353 3.73 0.00 0 0 100 2 872.41364 1743.81999 0.35 49.73 5761 5761 MS2 19/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 209 3.63 0.00 0 15 25 2 872.41547 1743.82366 2.45 47.22 4895 4895 MS2 23/28 Linfeng_122411_rIgG_8.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 358 3.60 0.00 1 38 25 3 409.89291 1227.66419 -4.11 2.70 259 259 MS2 27/44 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 258 3.59 0.00 0 33 100 2 888.40930 1775.81133 1.19 0.76 94 94 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 279 3.56 0.00 0 45 100 2 888.41132 1775.81536 3.45 1.06 165 165 MS2 17/28 Linfeng_20120130_CHD1_8.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 561 3.52 0.00 1 0 89 2 640.33496 1279.66265 4.50 28.69 2607 2607 MS2 15/18 Linfeng_20120130_CHD1_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 551 3.42 0.00 1 1 100 3 427.22537 1279.66156 3.65 29.06 2147 2147 MS2 25/36 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 323 3.40 0.00 0 14 100 2 872.41357 1743.81987 0.28 49.70 6982 6982 MS2 17/28 Linfeng_20120130_CHD1_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 504 3.24 0.00 1 1 100 2 640.33441 1279.66155 3.64 29.71 2771 2771 MS2 15/18 Linfeng_20120130_CHD1_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 551 3.23 0.00 1 4 100 3 427.22537 1279.66156 3.65 29.13 2155 2155 MS2 25/36 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 484 3.20 0.00 1 1 52 2 640.33380 1279.66033 2.68 28.89 2131 2131 MS2 15/18 Linfeng_20120130_CHD1_9.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.02 0.00 1 4 22 3 409.89587 1227.67307 3.13 2.88 242 242 MS2 25/44 Linfeng_122411_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 500 3.01 0.00 1 9 100 2 640.33441 1279.66155 3.64 30.92 2382 2382 MS2 15/18 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 505 2.97 0.00 1 0 100 2 640.33405 1279.66081 3.07 27.89 2005 2005 MS2 13/18 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 502 2.92 0.00 1 5 100 2 640.33405 1279.66081 3.07 29.90 2241 2241 MS2 15/18 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 273 2.91 0.00 0 60 100 2 888.41162 1775.81597 3.80 0.92 125 125 MS2 16/28 Linfeng_20120130_CHD1_6.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 550 2.88 0.00 1 2 100 3 427.22534 1279.66147 3.58 29.09 2151 2151 MS2 27/36 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 549 2.87 0.00 1 3 100 3 427.22525 1279.66120 3.37 29.23 2165 2165 MS2 26/36 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 294 2.86 0.00 0 33 100 2 888.41309 1775.81890 5.45 0.79 87 87 MS2 14/28 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 554 2.77 0.00 1 4 100 3 427.22531 1279.66138 3.51 29.45 2190 2190 MS2 23/36 Linfeng_20120130_CHD1_9.raw High SRKESYSIYVYK Unambiguous 4 1 IPI00003935.6 CID 1.0000 0.0000 1 1 400 2.76 0.00 2 27 25 3 508.26654 1522.78507 -3.27 26.98 3113 3113 MS2 22/44 Linfeng_091311_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 367 2.71 0.00 1 22 25 3 427.22406 1279.65763 0.57 25.64 2059 2059 MS2 23/36 Linfeng_122411_rIgG_10.raw High ESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 526 2.62 0.00 0 5 87 2 576.28668 1151.56609 3.62 33.37 3529 3529 MS2 12/16 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 295 2.56 0.00 0 11 6 2 888.41217 1775.81706 4.42 48.58 5545 5545 MS2 15/28 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 325 2.42 0.00 1 3 2 2 640.33154 1279.65581 -0.85 3.36 319 319 MS2 15/18 Linfeng_122411_rIgG_10.raw High ESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 424 2.37 0.00 0 26 86 2 576.28760 1151.56792 5.21 32.42 2610 2610 MS2 11/16 Linfeng_20120130_CHD1_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 351 2.36 0.00 1 53 25 2 640.33203 1279.65679 -0.08 25.66 2062 2062 MS2 13/18 Linfeng_122411_rIgG_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 325 2.36 0.00 1 2 4 2 640.33160 1279.65593 -0.75 3.34 302 302 MS2 15/18 Linfeng_122411_rIgG_9.raw High ESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 459 2.30 0.00 0 44 100 2 576.28680 1151.56633 3.83 32.36 3301 3301 MS2 12/16 Linfeng_20120130_CHD1_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 540 2.20 0.00 1 6 100 2 640.33472 1279.66216 4.11 27.69 2442 2442 MS2 11/18 Linfeng_20120130_CHD1_10.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 296 2.20 0.00 1 9 3 2 640.32831 1279.64934 -5.90 26.65 3067 3067 MS2 15/18 Linfeng_091311_rIgG_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 82 2.17 0.00 0 1 27 2 477.30737 953.60747 4.63 46.86 5111 5111 MS2 11/16 Linfeng_20120130_CHD1_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 71 2.17 0.00 0 14 100 2 477.30707 953.60686 3.99 42.44 5286 5286 MS2 10/16 Linfeng_20120130_CHD1_10.raw High IAGEASR Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 515 2.13 0.00 0 3 25 2 352.19202 703.37676 4.81 2.96 244 244 MS2 11/12 Linfeng_122411_rIgG_8.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 75 2.11 0.00 0 3 18 2 477.30609 953.60491 1.94 31.83 2792 2792 MS2 14/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 30 2.10 0.00 0 3 13 2 477.30441 953.60155 -1.58 32.11 3324 3324 MS2 13/16 Linfeng_122411_rIgG_5.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 39 2.09 0.00 0 8 25 2 477.30557 953.60387 0.86 31.84 2887 2887 MS2 13/16 Linfeng_122411_rIgG_10.raw High HAVSEGTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 199 2.08 0.00 0 32 25 2 414.71359 828.41991 -1.37 0.15 22 22 MS2 12/14 Linfeng_091311_rIgG_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 7 25 2 477.30594 953.60460 1.62 34.03 3076 3076 MS2 12/16 Linfeng_122411_rIgG_9.raw High KESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 338 2.06 0.00 1 16 25 2 640.33020 1279.65312 -2.94 30.42 3592 3592 MS2 15/18 Linfeng_091311_rIgG_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 83 2.05 0.00 0 15 100 2 477.30704 953.60680 3.93 40.54 4790 4790 MS2 10/16 Linfeng_20120130_CHD1_4.raw High ESYSIYVYK Unambiguous 5 1 IPI00003935.6 CID 1.0000 0.0000 1 1 462 2.03 0.00 0 5 15 2 576.28693 1151.56658 4.04 32.73 2659 2659 MS2 12/16 Linfeng_20120130_CHD1_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 37 2.01 0.00 0 11 25 2 477.30457 953.60185 -1.26 44.35 4495 4495 MS2 10/16 Linfeng_122411_rIgG_10.raw IPI00020101.9 Histone H2B type 1-C/E/F/G/I 47.62 14 3 9 86 35.50 34.92 6 12 44.03 42.06 5 15 208.20 26.98 4 59 126 13.9 10.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 363 5.07 0.00 0 15 37 2 872.41266 1743.81804 -0.77 48.63 6785 6785 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 321 4.93 0.00 0 23 19 2 872.41461 1743.82195 1.47 48.62 5559 5559 MS2 22/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 300 4.92 0.00 0 22 100 2 888.41290 1775.81853 5.24 10.63 907 907 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 367 4.84 0.00 0 10 100 2 872.41223 1743.81719 -1.26 48.99 6870 6870 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 305 4.69 0.00 0 45 100 2 880.41107 1759.81487 0.32 48.83 6836 6836 MS2 20/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 284 4.55 0.00 0 23 100 2 888.41315 1775.81902 5.52 11.30 711 711 MS2 20/28 Linfeng_20120130_CHD1_1.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 331 4.55 0.00 0 14 11 2 880.41205 1759.81682 1.43 48.62 5557 5557 MS2 22/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 288 4.51 0.00 0 11 74 2 888.41107 1775.81487 3.18 0.63 52 52 MS2 20/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 303 4.42 0.00 0 15 100 2 888.41193 1775.81658 4.14 0.70 69 69 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 279 4.37 0.00 0 27 100 2 888.41162 1775.81597 3.80 1.35 222 222 MS2 20/28 Linfeng_20120130_CHD1_6.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 219 4.32 0.00 0 3 25 3 581.94611 1743.82376 2.51 47.13 4850 4850 MS2 31/56 Linfeng_122411_rIgG_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 314 4.32 0.00 0 33 100 2 880.41193 1759.81658 1.29 48.85 6840 6840 MS2 23/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 301 4.21 0.00 0 21 100 2 888.41187 1775.81645 4.07 0.70 64 64 MS2 20/28 Linfeng_20120130_CHD1_9.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 312 4.21 0.00 0 47 100 2 880.41400 1759.82073 3.65 55.89 6476 6476 MS2 19/28 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 294 4.18 0.00 0 9 100 2 888.41211 1775.81694 4.35 1.41 246 246 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 285 4.12 0.00 0 25 100 2 888.41168 1775.81609 3.87 11.32 714 714 MS2 17/28 Linfeng_20120130_CHD1_1.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 220 4.11 0.00 0 1 25 3 581.94641 1743.82468 3.03 47.15 4735 4735 MS2 31/56 Linfeng_122411_rIgG_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 295 4.07 0.00 0 24 100 2 888.41284 1775.81841 5.17 1.16 164 164 MS2 22/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 278 4.05 0.00 0 18 100 2 888.41162 1775.81597 3.80 1.02 156 156 MS2 18/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 296 4.03 0.00 0 22 100 2 888.41180 1775.81633 4.00 1.67 271 271 MS2 21/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 292 4.03 0.00 0 18 100 2 888.41211 1775.81694 4.35 0.75 76 76 MS2 18/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 342 4.03 0.00 0 12 100 2 872.41364 1743.81999 0.35 49.68 5754 5754 MS2 18/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 202 4.03 0.00 0 0 25 3 581.94354 1743.81607 -1.90 48.36 5903 5903 MS2 31/56 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 243 4.02 0.00 0 12 100 2 888.40961 1775.81194 1.53 1.37 226 226 MS2 17/28 Linfeng_20120130_CHD1_7.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 196 4.02 0.00 0 10 25 2 872.41638 1743.82549 3.50 47.09 4727 4727 MS2 23/28 Linfeng_122411_rIgG_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 285 3.99 0.00 0 25 100 2 888.41089 1775.81450 2.97 1.75 330 330 MS2 18/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 257 3.98 0.00 0 18 56 2 888.40936 1775.81145 1.25 1.86 356 356 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 318 3.95 0.00 0 35 100 2 888.41272 1775.81816 5.04 1.19 195 195 MS2 20/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 299 3.94 0.00 0 31 100 2 888.41235 1775.81743 4.62 11.07 980 980 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 261 3.93 0.00 0 27 100 2 888.40991 1775.81255 1.87 0.66 62 62 MS2 22/28 Linfeng_20120130_CHD1_6.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 189 3.92 0.00 0 11 25 2 872.41315 1743.81902 -0.21 48.33 5900 5900 MS2 23/28 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 300 3.90 0.00 0 34 100 2 888.41199 1775.81670 4.21 1.13 171 171 MS2 21/28 Linfeng_20120130_CHD1_6.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 252 3.89 0.00 0 26 100 2 888.40845 1775.80962 0.22 0.64 63 63 MS2 20/28 Linfeng_20120130_CHD1_7.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 352 3.89 0.00 0 11 100 2 872.41370 1743.82012 0.42 49.63 5746 5746 MS2 18/28 Linfeng_20120130_CHD1_9.raw High HAVSEGTKAVTKYTSSK Unambiguous 14 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 406 3.86 0.00 2 54 25 4 449.23911 1793.93459 -2.60 18.28 1886 1886 MS2 30/96 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 265 3.86 0.00 0 27 72 2 888.40955 1775.81182 1.46 0.68 70 70 MS2 21/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 261 3.86 0.00 0 34 100 2 888.40973 1775.81218 1.67 0.76 93 93 MS2 21/28 Linfeng_20120130_CHD1_7.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.85 0.00 1 3 15 3 409.89600 1227.67344 3.42 2.95 239 239 MS2 27/44 Linfeng_122411_rIgG_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 190 3.83 0.00 0 4 25 2 872.41644 1743.82561 3.57 47.04 4839 4839 MS2 22/28 Linfeng_122411_rIgG_10.raw High AmGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation) CID 1.0000 0.0000 1 1 333 3.81 0.00 0 15 25 2 880.41388 1759.82048 3.51 46.93 6329 6329 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 298 3.80 0.00 0 30 100 2 888.41162 1775.81597 3.80 1.52 264 264 MS2 19/28 Linfeng_20120130_CHD1_6.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 262 3.79 0.00 0 42 73 2 888.40942 1775.81157 1.32 2.03 410 410 MS2 17/28 Linfeng_20120130_CHD1_8.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 353 3.73 0.00 0 0 100 2 872.41364 1743.81999 0.35 49.73 5761 5761 MS2 19/28 Linfeng_20120130_CHD1_9.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 209 3.63 0.00 0 15 25 2 872.41547 1743.82366 2.45 47.22 4895 4895 MS2 23/28 Linfeng_122411_rIgG_8.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 358 3.60 0.00 1 38 25 3 409.89291 1227.66419 -4.11 2.70 259 259 MS2 27/44 Linfeng_091311_rIgG_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 258 3.59 0.00 0 33 100 2 888.40930 1775.81133 1.19 0.76 94 94 MS2 19/28 Linfeng_20120130_CHD1_8.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 279 3.56 0.00 0 45 100 2 888.41132 1775.81536 3.45 1.06 165 165 MS2 17/28 Linfeng_20120130_CHD1_8.raw High AMGIMNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 323 3.40 0.00 0 14 100 2 872.41357 1743.81987 0.28 49.70 6982 6982 MS2 17/28 Linfeng_20120130_CHD1_10.raw High SRKESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 448 3.25 0.00 2 20 25 3 503.59534 1508.77146 -1.94 22.28 2453 2453 MS2 22/44 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 570 3.08 0.00 1 0 100 2 633.32611 1265.64495 2.93 23.09 1823 1823 MS2 15/18 Linfeng_20120130_CHD1_10.raw High SRKESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 401 3.08 0.00 2 11 25 3 503.59332 1508.76542 -5.95 25.26 2873 2873 MS2 19/44 Linfeng_091311_rIgG_10.raw High HAVSEGTKAVTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 371 3.02 0.00 1 4 22 3 409.89587 1227.67307 3.13 2.88 242 242 MS2 25/44 Linfeng_122411_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 578 2.95 0.00 1 28 100 2 633.32642 1265.64556 3.41 22.96 1812 1812 MS2 13/18 Linfeng_20120130_CHD1_10.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 273 2.91 0.00 0 60 100 2 888.41162 1775.81597 3.80 0.92 125 125 MS2 16/28 Linfeng_20120130_CHD1_6.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 294 2.86 0.00 0 33 100 2 888.41309 1775.81890 5.45 0.79 87 87 MS2 14/28 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 346 2.77 0.00 1 7 4 3 422.55075 1265.63770 -2.80 24.70 2794 2794 MS2 23/36 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 541 2.75 0.00 1 0 100 2 633.32629 1265.64531 3.22 27.17 1920 1920 MS2 13/18 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 585 2.73 0.00 1 13 100 2 633.32629 1265.64531 3.22 27.97 2491 2491 MS2 12/18 Linfeng_20120130_CHD1_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 370 2.69 0.00 1 45 25 3 422.55304 1265.64457 2.63 23.93 1933 1933 MS2 22/36 Linfeng_122411_rIgG_8.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 545 2.62 0.00 1 2 100 2 633.32599 1265.64470 2.73 24.10 1666 1666 MS2 14/18 Linfeng_20120130_CHD1_9.raw High AmGImNSFVNDIFER Unambiguous 18 2 IPI00003935.6;IPI00020101.9 M2(Oxidation); M5(Oxidation) CID 1.0000 0.0000 1 1 295 2.56 0.00 0 11 6 2 888.41217 1775.81706 4.42 48.58 5545 5545 MS2 15/28 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 576 2.50 0.00 1 8 100 2 633.32617 1265.64507 3.02 27.06 2343 2343 MS2 13/18 Linfeng_20120130_CHD1_10.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 457 2.45 0.00 0 3 100 2 569.27887 1137.55046 3.68 27.48 1953 1953 MS2 11/16 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 553 2.39 0.00 1 14 100 2 633.32593 1265.64458 2.64 23.10 1594 1594 MS2 13/18 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 321 2.30 0.00 1 12 25 2 633.32227 1265.63725 -3.15 24.89 2702 2702 MS2 15/18 Linfeng_091311_rIgG_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 345 2.29 0.00 1 4 25 2 633.32281 1265.63835 -2.28 28.45 3320 3320 MS2 15/18 Linfeng_091311_rIgG_10.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 430 2.25 0.00 0 2 100 2 569.27838 1137.54949 2.83 27.44 1947 1947 MS2 11/16 Linfeng_20120130_CHD1_9.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 342 2.25 0.00 1 4 5 2 633.32227 1265.63725 -3.15 24.70 2793 2793 MS2 15/18 Linfeng_091311_rIgG_10.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 427 2.21 0.00 0 12 100 2 569.27832 1137.54936 2.72 30.55 2325 2325 MS2 11/16 Linfeng_20120130_CHD1_9.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 427 2.20 0.00 0 4 100 2 569.27899 1137.55071 3.90 28.62 2101 2101 MS2 11/16 Linfeng_20120130_CHD1_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 82 2.17 0.00 0 1 27 2 477.30737 953.60747 4.63 46.86 5111 5111 MS2 11/16 Linfeng_20120130_CHD1_9.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 435 2.17 0.00 0 8 100 2 569.27930 1137.55132 4.44 28.43 2562 2562 MS2 11/16 Linfeng_20120130_CHD1_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 71 2.17 0.00 0 14 100 2 477.30707 953.60686 3.99 42.44 5286 5286 MS2 10/16 Linfeng_20120130_CHD1_10.raw High IAGEASR Unambiguous 16 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 515 2.13 0.00 0 3 25 2 352.19202 703.37676 4.81 2.96 244 244 MS2 11/12 Linfeng_122411_rIgG_8.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 75 2.11 0.00 0 3 18 2 477.30609 953.60491 1.94 31.83 2792 2792 MS2 14/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 30 2.10 0.00 0 3 13 2 477.30441 953.60155 -1.58 32.11 3324 3324 MS2 13/16 Linfeng_122411_rIgG_5.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 428 2.10 0.00 0 8 100 2 569.27905 1137.55083 4.01 27.41 2398 2398 MS2 12/16 Linfeng_20120130_CHD1_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 39 2.09 0.00 0 8 25 2 477.30557 953.60387 0.86 31.84 2887 2887 MS2 13/16 Linfeng_122411_rIgG_10.raw High HAVSEGTK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 199 2.08 0.00 0 32 25 2 414.71359 828.41991 -1.37 0.15 22 22 MS2 12/14 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 338 2.07 0.00 1 20 25 2 633.32233 1265.63738 -3.05 27.19 3142 3142 MS2 15/18 Linfeng_091311_rIgG_10.raw High KESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 353 2.06 0.00 1 19 25 2 633.32568 1265.64409 2.25 23.69 1831 1831 MS2 9/18 Linfeng_122411_rIgG_10.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 7 25 2 477.30594 953.60460 1.62 34.03 3076 3076 MS2 12/16 Linfeng_122411_rIgG_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 83 2.05 0.00 0 15 100 2 477.30704 953.60680 3.93 40.54 4790 4790 MS2 10/16 Linfeng_20120130_CHD1_4.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 415 2.04 0.00 0 5 14 2 569.27893 1137.55058 3.79 27.64 1973 1973 MS2 13/16 Linfeng_20120130_CHD1_9.raw High ESYSVYVYK Unambiguous 13 1 IPI00020101.9 CID 1.0000 0.0000 1 1 474 2.03 0.00 0 5 10 2 569.27881 1137.55034 3.58 27.92 2009 2009 MS2 11/16 Linfeng_20120130_CHD1_9.raw High LLLPGELAK Unambiguous 18 2 IPI00003935.6;IPI00020101.9 CID 1.0000 0.0000 1 1 37 2.01 0.00 0 11 25 2 477.30457 953.60185 -1.26 44.35 4495 4495 MS2 10/16 Linfeng_122411_rIgG_10.raw IPI00009867.3 "Keratin, type II cytoskeletal 5" 46.78 4 21 33 442 359.76 29.15 18 139 271.36 31.36 20 92 602.41 27.80 15 211 590 62.3 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 184 7.04 0.00 1 9 25 3 806.71362 2418.12632 2.25 33.58 3263 3263 MS2 44/76 Linfeng_122411_rIgG_2.raw High TEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 188 6.08 0.00 1 5 25 3 806.71375 2418.12668 2.40 33.50 3226 3226 MS2 40/76 Linfeng_122411_rIgG_3.raw High mFFDAELSQmQTHVSDTSVVLSmDNNR Unambiguous 2 1 IPI00009867.3 M1(Oxidation); M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 158 5.44 0.00 0 3 100 3 1050.80359 3150.39621 4.69 41.85 5538 5538 MS2 32/104 Linfeng_20120130_CHD1_5.raw High mFFDAELSQmQTHVSDTSVVLSmDNNR Unambiguous 2 1 IPI00009867.3 M1(Oxidation); M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 152 5.25 0.00 0 11 100 3 1050.80518 3150.40097 6.20 42.80 5228 5228 MS2 31/104 Linfeng_20120130_CHD1_4.raw High mFFDAELSQmQTHVSDTSVVLSmDNNR Unambiguous 2 1 IPI00009867.3 M1(Oxidation); M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 158 5.01 0.00 0 0 100 3 1050.80371 3150.39658 4.81 42.92 5254 5254 MS2 28/104 Linfeng_20120130_CHD1_4.raw High mFFDAELSQmQTHVSDTSVVLSmDNNR Unambiguous 2 1 IPI00009867.3 M1(Oxidation); M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 153 4.77 0.00 0 16 100 3 1050.80298 3150.39438 4.11 42.69 5205 5205 MS2 32/104 Linfeng_20120130_CHD1_4.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 211 4.19 0.00 2 14 25 4 666.07025 2661.25918 1.93 31.91 3221 3221 MS2 41/126 Linfeng_122411_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 372 4.16 0.00 0 0 100 2 705.84631 1410.68535 4.15 26.81 2310 2310 MS2 20/28 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 359 4.09 0.00 0 4 100 2 721.34198 1441.67668 4.46 46.28 6014 6014 MS2 20/22 Linfeng_20120130_CHD1_4.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 476 4.05 0.00 1 4 25 3 462.59335 1385.76551 1.42 33.22 3218 3218 MS2 25/44 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 393 4.04 0.00 0 12 100 2 705.84546 1410.68364 2.94 27.09 1850 1850 MS2 19/28 Linfeng_20120130_CHD1_2.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 214 4.02 0.00 2 13 25 4 666.07013 2661.25869 1.75 31.64 2985 2985 MS2 39/126 Linfeng_122411_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 482 3.99 0.00 1 12 25 3 462.59344 1385.76578 1.62 33.54 3428 3428 MS2 27/44 Linfeng_122411_rIgG_6.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 411 3.96 0.00 0 8 100 2 705.84601 1410.68474 3.72 26.51 1947 1947 MS2 20/28 Linfeng_20120130_CHD1_1.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 298 3.91 0.00 0 11 100 2 729.33850 1457.66973 3.12 37.33 4166 4166 MS2 16/22 Linfeng_20120130_CHD1_4.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 357 3.88 0.00 0 10 100 2 721.34186 1441.67644 4.29 46.38 6037 6037 MS2 19/22 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 299 3.86 0.00 0 8 100 2 729.33899 1457.67070 3.79 37.80 3734 3734 MS2 19/22 Linfeng_20120130_CHD1_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.85 0.00 0 7 25 2 705.84491 1410.68254 2.16 26.46 2503 2503 MS2 22/28 Linfeng_122411_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 3.81 0.00 0 5 100 2 705.84558 1410.68389 3.11 26.62 1977 1977 MS2 18/28 Linfeng_20120130_CHD1_4.raw High QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 3.80 0.00 0 25 25 3 567.93799 1701.79941 1.19 31.15 2952 2952 MS2 31/56 Linfeng_122411_rIgG_2.raw High SRTEAESWYQTKYEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 213 3.80 0.00 2 6 25 4 666.07019 2661.25893 1.84 31.82 3039 3039 MS2 39/126 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 3.79 0.00 0 0 100 2 705.84473 1410.68218 1.90 26.63 2205 2205 MS2 21/28 Linfeng_20120130_CHD1_8.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 305 3.71 0.00 0 17 100 2 729.33942 1457.67156 4.38 37.65 3532 3532 MS2 18/22 Linfeng_20120130_CHD1_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 349 3.64 0.00 0 37 100 2 649.81500 1298.62273 -5.40 32.60 3362 3362 MS2 16/20 Linfeng_20120130_CHD1_5.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 401 3.63 0.00 0 2 50 2 649.82068 1298.63408 3.34 33.24 3314 3314 MS2 16/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 488 3.61 0.00 1 19 25 3 462.59390 1385.76715 2.61 33.31 2985 2985 MS2 25/44 Linfeng_122411_rIgG_9.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 374 3.60 0.00 0 34 25 2 705.86298 1410.71868 -2.63 28.45 3219 3219 MS2 18/26 Linfeng_091311_rIgG_4.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 293 3.60 0.00 0 11 100 2 729.33911 1457.67095 3.96 37.73 3550 3550 MS2 20/22 Linfeng_20120130_CHD1_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 220 3.55 0.00 0 19 25 2 705.84491 1410.68254 2.16 25.05 2258 2258 MS2 21/28 Linfeng_122411_rIgG_4.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 197 3.55 0.00 0 25 25 2 705.84125 1410.67522 -3.03 27.76 2857 2857 MS2 22/28 Linfeng_091311_rIgG_1.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 531 3.54 0.00 0 2 100 2 705.86737 1410.72746 3.60 29.03 2575 2575 MS2 18/26 Linfeng_20120130_CHD1_8.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 3.53 0.00 0 20 25 2 705.84149 1410.67571 -2.69 27.69 3158 3158 MS2 23/28 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 286 3.52 0.00 0 33 100 2 729.33777 1457.66826 2.12 37.13 4451 4451 MS2 17/22 Linfeng_20120130_CHD1_5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 3.52 0.00 0 8 25 2 705.84174 1410.67620 -2.34 27.92 3114 3114 MS2 21/28 Linfeng_091311_rIgG_7.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 488 3.52 0.00 1 4 25 3 462.59360 1385.76624 1.95 33.32 3202 3202 MS2 25/44 Linfeng_122411_rIgG_3.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 309 3.51 0.00 0 18 100 2 729.33929 1457.67131 4.21 37.20 4011 4011 MS2 16/22 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 619 3.42 0.00 0 29 55 2 572.31769 1143.62810 2.15 34.37 3571 3571 MS2 16/18 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NKLAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 530 3.40 0.00 1 9 8 3 462.59229 1385.76230 -0.89 3.95 398 398 MS2 26/44 Linfeng_122411_rIgG_7.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 3.35 0.00 0 11 25 2 705.84448 1410.68169 1.55 4.75 540 540 MS2 21/28 Linfeng_122411_rIgG_3.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 298 3.35 0.00 0 4 100 2 729.33881 1457.67034 3.54 37.54 3678 3678 MS2 17/22 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 730 3.31 0.00 0 36 100 2 572.31708 1143.62688 1.08 34.10 3742 3742 MS2 16/18 Linfeng_20120130_CHD1_5.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 341 3.30 0.00 0 20 100 2 721.34271 1441.67815 5.47 45.88 6082 6082 MS2 16/22 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 607 3.29 0.00 0 19 100 2 572.31793 1143.62859 2.58 34.41 3751 3751 MS2 16/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 610 3.28 0.00 0 25 25 2 572.31708 1143.62688 1.08 29.44 2727 2727 MS2 16/18 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 3.27 0.00 0 8 25 2 705.84479 1410.68230 1.99 4.66 526 526 MS2 20/28 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 308 3.26 0.00 0 17 100 2 729.33911 1457.67095 3.96 37.80 3566 3566 MS2 17/22 Linfeng_20120130_CHD1_3.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 297 3.24 0.00 0 14 100 2 729.33868 1457.67009 3.38 37.59 3520 3520 MS2 17/22 Linfeng_20120130_CHD1_3.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 353 3.24 0.00 0 55 100 2 649.81500 1298.62273 -5.40 32.72 3392 3392 MS2 16/20 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 3.24 0.00 0 14 25 2 705.84222 1410.67717 -1.65 27.63 3113 3113 MS2 21/28 Linfeng_091311_rIgG_3.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 307 3.23 0.00 0 37 100 2 729.33936 1457.67143 4.30 38.00 3606 3606 MS2 16/22 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 301 3.22 0.00 0 20 100 2 729.33929 1457.67131 4.21 37.77 4139 4139 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 362 3.22 0.00 0 19 100 2 721.34192 1441.67656 4.37 45.53 5835 5835 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 550 3.21 0.00 0 11 100 2 705.86719 1410.72710 3.34 28.94 2561 2561 MS2 18/26 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 295 3.21 0.00 0 4 100 2 729.33868 1457.67009 3.38 37.27 4026 4026 MS2 18/22 Linfeng_20120130_CHD1_1.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 684 3.21 0.00 0 31 100 2 572.31879 1143.63030 4.07 34.27 3357 3357 MS2 16/18 Linfeng_20120130_CHD1_1.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 388 3.20 0.00 0 28 25 2 705.86633 1410.72539 2.13 25.22 2138 2138 MS2 20/26 Linfeng_122411_rIgG_3.raw High SRTEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 238 3.19 0.00 1 30 25 3 495.90411 1485.69779 0.60 4.66 521 521 MS2 24/44 Linfeng_122411_rIgG_6.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 345 3.19 0.00 0 26 100 2 721.34052 1441.67375 2.43 45.80 5577 5577 MS2 17/22 Linfeng_20120130_CHD1_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 644 3.18 0.00 0 29 100 2 572.31860 1143.62993 3.75 34.58 2934 2934 MS2 16/18 Linfeng_20120130_CHD1_3.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 3.18 0.00 0 27 100 2 705.84552 1410.68376 3.03 26.43 1947 1947 MS2 19/28 Linfeng_20120130_CHD1_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 640 3.17 0.00 0 35 100 2 572.31738 1143.62749 1.62 34.50 2643 2643 MS2 16/18 Linfeng_20120130_CHD1_7.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 329 3.17 0.00 0 19 100 2 721.34247 1441.67766 5.14 45.83 6070 6070 MS2 16/22 Linfeng_20120130_CHD1_10.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 3.15 0.00 0 24 25 2 705.84204 1410.67681 -1.91 27.84 3073 3073 MS2 20/28 Linfeng_091311_rIgG_5.raw High TTAENEFVmLKK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 564 3.15 0.00 1 63 100 2 713.86743 1426.72759 2.01 27.69 2301 2301 MS2 14/22 Linfeng_20120130_CHD1_5.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 42 25 2 572.31775 1143.62822 2.26 28.35 2417 2417 MS2 16/18 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 327 3.11 0.00 0 23 100 2 721.34259 1441.67790 5.30 45.62 5865 5865 MS2 19/22 Linfeng_20120130_CHD1_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 532 3.10 0.00 0 23 25 2 572.31726 1143.62724 1.40 29.52 2707 2707 MS2 16/18 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 543 3.08 0.00 0 3 100 2 705.86713 1410.72698 3.25 29.14 2595 2595 MS2 18/26 Linfeng_20120130_CHD1_8.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 377 3.08 0.00 0 7 25 2 705.86646 1410.72563 2.30 24.94 2127 2127 MS2 18/26 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 217 3.07 0.00 0 40 25 2 705.84131 1410.67534 -2.95 27.80 3101 3101 MS2 22/28 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 371 3.06 0.00 0 12 25 2 705.86243 1410.71758 -3.41 28.40 3255 3255 MS2 21/26 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 443 3.05 0.00 0 8 100 2 556.29315 1111.57903 4.29 26.63 2281 2281 MS2 17/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 529 3.04 0.00 0 9 100 2 705.86682 1410.72637 2.82 28.79 2396 2396 MS2 19/26 Linfeng_20120130_CHD1_4.raw High QcANLQNAIADAEQR Unambiguous 2 1 IPI00009867.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 181 3.04 0.00 0 6 25 2 851.40442 1701.80156 2.45 31.24 2964 2964 MS2 18/28 Linfeng_122411_rIgG_2.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 3.04 0.00 0 49 25 2 705.84607 1410.68486 3.80 20.36 1594 1594 MS2 20/28 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 619 3.03 0.00 0 31 100 2 572.31726 1143.62724 1.40 34.62 3707 3707 MS2 16/18 Linfeng_20120130_CHD1_8.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 563 3.03 0.00 0 25 25 2 572.31512 1143.62297 -2.33 30.95 3561 3561 MS2 16/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 236 3.01 0.00 0 14 25 2 597.78949 1194.57170 -2.74 20.99 2197 2197 MS2 17/18 Linfeng_091311_rIgG_6.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 529 3.01 0.00 0 39 25 2 572.31421 1143.62114 -3.93 31.20 3522 3522 MS2 16/18 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 508 2.99 0.00 0 17 12 2 572.31445 1143.62163 -3.51 31.04 3612 3612 MS2 16/18 Linfeng_091311_rIgG_2.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 237 2.97 0.00 0 4 12 2 597.78967 1194.57207 -2.44 20.74 2188 2188 MS2 17/18 Linfeng_091311_rIgG_2.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 630 2.96 0.00 0 40 100 2 572.31854 1143.62981 3.64 34.47 3033 3033 MS2 16/18 Linfeng_20120130_CHD1_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 226 2.96 0.00 0 26 25 2 597.78857 1194.56987 -4.28 20.87 2135 2135 MS2 17/18 Linfeng_091311_rIgG_5.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 351 2.96 0.00 0 31 25 2 705.86279 1410.71831 -2.89 28.67 3217 3217 MS2 20/26 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 634 2.94 0.00 0 44 100 2 572.31744 1143.62761 1.72 34.50 3682 3682 MS2 16/18 Linfeng_20120130_CHD1_8.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 507 2.93 0.00 0 7 100 2 556.29297 1111.57866 3.96 26.93 2330 2330 MS2 16/20 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 455 2.93 0.00 0 14 100 2 556.29254 1111.57781 3.19 27.73 1891 1891 MS2 14/20 Linfeng_20120130_CHD1_7.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 341 2.92 0.00 0 33 100 2 721.34015 1441.67302 1.92 45.37 5795 5795 MS2 15/22 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 2.91 0.00 0 46 25 2 705.84558 1410.68389 3.11 19.34 1502 1502 MS2 18/28 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 244 2.88 0.00 0 11 25 2 597.78973 1194.57219 -2.34 20.72 2159 2159 MS2 17/18 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.87 0.00 0 7 100 2 602.32452 1203.64177 4.08 36.29 4176 4176 MS2 16/18 Linfeng_20120130_CHD1_10.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 241 2.87 0.00 0 24 25 2 597.78961 1194.57195 -2.54 20.76 2155 2155 MS2 17/18 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 453 2.87 0.00 0 3 41 2 556.29248 1111.57768 3.08 27.21 2093 2093 MS2 17/20 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 470 2.87 0.00 0 8 100 2 556.29285 1111.57842 3.74 27.89 1969 1969 MS2 15/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.86 0.00 0 23 100 2 602.32355 1203.63982 2.46 35.44 3799 3799 MS2 16/18 Linfeng_20120130_CHD1_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 501 2.86 0.00 0 7 100 2 705.86676 1410.72624 2.73 29.12 2013 2013 MS2 15/26 Linfeng_20120130_CHD1_7.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 446 2.86 0.00 0 2 100 2 556.29260 1111.57793 3.30 26.77 1802 1802 MS2 14/20 Linfeng_20120130_CHD1_7.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 370 2.86 0.00 0 34 25 2 705.86591 1410.72453 1.52 27.25 2609 2609 MS2 18/26 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 675 2.85 0.00 0 17 100 2 602.32294 1203.63860 1.44 35.55 3819 3819 MS2 14/18 Linfeng_20120130_CHD1_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 514 2.85 0.00 0 30 25 2 572.31476 1143.62224 -2.97 31.22 3574 3574 MS2 16/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 788 2.85 0.00 0 18 100 2 602.32404 1203.64079 3.27 35.90 3722 3722 MS2 15/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 301 2.85 0.00 0 13 100 2 729.33936 1457.67143 4.30 37.84 3574 3574 MS2 16/22 Linfeng_20120130_CHD1_3.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 513 2.83 0.00 0 3 100 2 705.86847 1410.72966 5.15 29.06 2040 2040 MS2 16/26 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 448 2.81 0.00 0 7 100 2 556.29248 1111.57768 3.08 27.17 1919 1919 MS2 17/20 Linfeng_20120130_CHD1_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 430 2.81 0.00 0 19 7 2 572.31616 1143.62505 -0.52 3.34 312 312 MS2 16/18 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 266 2.80 0.00 0 17 25 2 597.79083 1194.57439 -0.50 16.99 1428 1428 MS2 17/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.79 0.00 2 10 100 3 436.89084 1308.65796 2.80 17.26 1401 1401 MS2 16/36 Linfeng_20120130_CHD1_8.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 408 2.79 0.00 0 10 100 2 649.82104 1298.63481 3.90 32.62 3359 3359 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 630 2.78 0.00 0 19 100 2 572.31860 1143.62993 3.75 34.70 3076 3076 MS2 16/18 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVKAQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 325 2.77 0.00 1 22 25 3 802.08575 2404.24271 2.98 52.98 5709 5709 MS2 29/80 Linfeng_122411_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 452 2.77 0.00 0 4 91 2 556.29205 1111.57683 2.31 27.18 2058 2058 MS2 17/20 Linfeng_20120130_CHD1_1.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 471 2.76 0.00 0 15 100 2 705.86700 1410.72673 3.08 29.20 2162 2162 MS2 16/26 Linfeng_20120130_CHD1_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High VDALmDEINFMK Unambiguous 2 1 IPI00009867.3 M5(Oxidation) CID 1.0000 0.0000 1 1 364 2.76 0.00 0 23 100 2 721.34174 1441.67620 4.12 45.60 5852 5852 MS2 16/22 Linfeng_20120130_CHD1_1.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 512 2.75 0.00 0 31 25 2 572.31787 1143.62847 2.47 28.32 2331 2331 MS2 16/18 Linfeng_122411_rIgG_9.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 2.75 0.00 0 38 25 2 705.84235 1410.67742 -1.47 27.68 3113 3113 MS2 22/28 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 521 2.74 0.00 0 47 15 2 572.31451 1143.62175 -3.40 31.10 3307 3307 MS2 16/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 723 2.73 0.00 0 8 100 2 602.32367 1203.64006 2.66 35.26 3570 3570 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 238 2.72 0.00 0 13 25 2 597.78931 1194.57134 -3.05 20.99 2168 2168 MS2 16/18 Linfeng_091311_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 252 2.72 0.00 0 58 25 2 705.84546 1410.68364 2.94 21.38 1689 1689 MS2 20/28 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 458 2.71 0.00 0 5 100 2 556.29321 1111.57915 4.40 26.75 2303 2303 MS2 16/20 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 515 2.71 0.00 0 5 100 2 556.29303 1111.57878 4.07 27.10 2350 2350 MS2 17/20 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 446 2.71 0.00 0 14 100 2 556.29266 1111.57805 3.41 26.44 2255 2255 MS2 14/20 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 746 2.71 0.00 0 8 100 2 602.32422 1203.64116 3.57 36.11 3770 3770 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 457 2.70 0.00 0 7 100 2 556.29236 1111.57744 2.86 27.85 1888 1888 MS2 17/20 Linfeng_20120130_CHD1_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 429 2.70 0.00 0 13 100 2 556.29242 1111.57756 2.97 27.00 1900 1900 MS2 11/20 Linfeng_20120130_CHD1_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 738 2.70 0.00 0 42 100 2 602.32416 1203.64104 3.47 36.06 3360 3360 MS2 15/18 Linfeng_20120130_CHD1_2.raw High TTAENEFVmLKK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 520 2.69 0.00 1 20 100 2 713.86816 1426.72905 3.04 27.56 2157 2157 MS2 11/22 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 350 2.69 0.00 0 34 25 2 705.86261 1410.71794 -3.15 28.64 3233 3233 MS2 16/26 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 595 2.69 0.00 2 10 100 3 436.89072 1308.65760 2.52 17.32 1108 1108 MS2 18/36 Linfeng_20120130_CHD1_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 548 2.68 0.00 0 13 100 2 705.86768 1410.72807 4.03 28.83 2626 2626 MS2 19/26 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 458 2.67 0.00 0 7 100 2 556.29266 1111.57805 3.41 27.27 1820 1820 MS2 16/20 Linfeng_20120130_CHD1_3.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 528 2.67 0.00 0 10 100 2 705.86749 1410.72771 3.77 29.00 2570 2570 MS2 17/26 Linfeng_20120130_CHD1_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 460 2.67 0.00 0 16 100 2 556.29254 1111.57781 3.19 26.95 1779 1779 MS2 15/20 Linfeng_20120130_CHD1_3.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 507 2.66 0.00 0 25 25 2 572.31494 1143.62261 -2.65 31.26 3563 3563 MS2 16/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 448 2.65 0.00 0 4 100 2 556.29205 1111.57683 2.31 27.32 2302 2302 MS2 16/20 Linfeng_20120130_CHD1_8.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.64 0.00 0 32 25 2 705.84613 1410.68498 3.89 26.63 2038 2038 MS2 18/28 Linfeng_122411_rIgG_7.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 215 2.64 0.00 0 31 25 2 705.84082 1410.67436 -3.64 27.76 3222 3222 MS2 18/28 Linfeng_091311_rIgG_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 790 2.64 0.00 0 6 100 2 602.32404 1203.64079 3.27 36.12 3929 3929 MS2 16/18 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 441 2.64 0.00 0 9 100 2 556.29205 1111.57683 2.31 26.20 1911 1911 MS2 13/20 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 444 2.64 0.00 0 9 100 2 556.29309 1111.57891 4.18 26.83 2314 2314 MS2 16/20 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 456 2.64 0.00 0 5 100 2 556.29224 1111.57720 2.64 26.88 1886 1886 MS2 14/20 Linfeng_20120130_CHD1_9.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 261 2.63 0.00 0 12 25 2 547.26581 1093.52434 -2.71 21.54 2298 2298 MS2 14/16 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.63 0.00 0 16 100 2 602.32379 1203.64031 2.86 35.35 3591 3591 MS2 16/18 Linfeng_20120130_CHD1_1.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 105 2.63 0.00 0 5 25 2 621.78534 1242.56340 -0.27 24.05 2177 2177 MS2 15/18 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 251 2.62 0.00 0 16 25 2 547.26593 1093.52458 -2.49 21.82 2309 2309 MS2 15/16 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 589 2.62 0.00 2 13 100 3 436.89093 1308.65824 3.01 17.53 1092 1092 MS2 16/36 Linfeng_20120130_CHD1_2.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 256 2.61 0.00 0 36 25 2 547.26605 1093.52483 -2.26 21.74 2251 2251 MS2 15/16 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 257 2.60 0.00 0 11 25 2 547.26630 1093.52532 -1.82 21.63 2275 2275 MS2 14/16 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 264 2.59 0.00 0 12 25 2 547.26617 1093.52507 -2.04 21.60 2278 2278 MS2 14/16 Linfeng_091311_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 436 2.59 0.00 0 4 100 2 556.29315 1111.57903 4.29 27.11 1800 1800 MS2 15/20 Linfeng_20120130_CHD1_3.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 245 2.59 0.00 0 19 25 2 597.78888 1194.57048 -3.77 21.03 2237 2237 MS2 17/18 Linfeng_091311_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.58 0.00 2 9 100 3 436.89099 1308.65842 3.15 17.65 1106 1106 MS2 17/36 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.58 0.00 0 17 100 2 602.32361 1203.63994 2.56 35.73 4059 4059 MS2 15/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.57 0.00 0 34 100 2 602.32428 1203.64128 3.67 36.52 4223 4223 MS2 16/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.57 0.00 0 12 100 2 602.32404 1203.64079 3.27 36.38 3427 3427 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.57 0.00 2 12 100 3 436.89081 1308.65787 2.73 17.92 1286 1286 MS2 17/36 Linfeng_20120130_CHD1_9.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 396 2.57 0.00 0 5 100 2 649.82013 1298.63298 2.49 32.97 2613 2613 MS2 13/20 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 767 2.56 0.00 0 13 100 2 602.32446 1203.64165 3.98 36.12 4143 4143 MS2 16/18 Linfeng_20120130_CHD1_10.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 509 2.55 0.00 0 29 25 2 572.31476 1143.62224 -2.97 31.29 3633 3633 MS2 16/18 Linfeng_091311_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.55 0.00 0 18 100 2 602.32379 1203.64031 2.86 35.93 4102 4102 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 747 2.55 0.00 0 67 100 2 602.32428 1203.64128 3.67 35.89 3206 3206 MS2 13/18 Linfeng_20120130_CHD1_9.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 333 2.55 0.00 0 4 25 2 720.36133 1439.71538 1.94 26.22 2470 2470 MS2 20/32 Linfeng_122411_rIgG_6.raw High TTAENEFVMLK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 478 2.54 0.00 0 21 100 2 641.82324 1282.63921 3.41 39.02 4483 4483 MS2 13/20 Linfeng_20120130_CHD1_4.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 269 2.54 0.00 0 7 25 2 547.26575 1093.52422 -2.82 21.91 2292 2292 MS2 15/16 Linfeng_091311_rIgG_7.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 501 2.54 0.00 0 13 100 2 705.86731 1410.72734 3.51 28.72 2294 2294 MS2 16/26 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.54 0.00 0 15 100 2 602.32379 1203.64031 2.86 35.17 3548 3548 MS2 15/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 766 2.54 0.00 0 12 100 2 602.32422 1203.64116 3.57 35.70 3849 3849 MS2 16/18 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 437 2.53 0.00 0 9 100 2 556.29272 1111.57817 3.52 26.95 1894 1894 MS2 16/20 Linfeng_20120130_CHD1_9.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 482 2.53 0.00 0 15 100 2 556.29126 1111.57524 0.88 26.31 2148 2148 MS2 15/20 Linfeng_20120130_CHD1_8.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 435 2.53 0.00 0 11 100 2 556.29224 1111.57720 2.64 26.91 1890 1890 MS2 14/20 Linfeng_20120130_CHD1_9.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 271 2.52 0.00 0 31 25 2 597.79077 1194.57427 -0.60 15.98 1334 1334 MS2 16/18 Linfeng_091311_rIgG_1.raw High TTAENEFVMLK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 470 2.52 0.00 0 19 100 2 641.82294 1282.63860 2.94 39.26 4537 4537 MS2 13/20 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 410 2.51 0.00 0 23 100 2 649.82068 1298.63408 3.34 32.24 3089 3089 MS2 12/20 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 685 2.51 0.00 0 26 100 2 602.32281 1203.63835 1.24 36.40 2943 2943 MS2 14/18 Linfeng_20120130_CHD1_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 756 2.50 0.00 0 13 100 2 602.32355 1203.63982 2.46 35.61 4030 4030 MS2 15/18 Linfeng_20120130_CHD1_10.raw High TTAENEFVmLKK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 568 2.50 0.00 1 21 100 2 713.86768 1426.72807 2.35 28.26 2283 2283 MS2 11/22 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 600 2.50 0.00 2 19 100 3 436.89096 1308.65833 3.08 17.18 1130 1130 MS2 17/36 Linfeng_20120130_CHD1_1.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 388 2.50 0.00 0 10 100 2 649.81940 1298.63152 1.36 33.03 2622 2622 MS2 14/20 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 765 2.50 0.00 0 14 100 2 602.32385 1203.64043 2.96 35.56 4019 4019 MS2 16/18 Linfeng_20120130_CHD1_10.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 197 2.50 0.00 0 55 25 2 597.79022 1194.57317 -1.52 18.05 1542 1542 MS2 17/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.50 0.00 0 43 100 2 602.32404 1203.64079 3.27 36.06 3230 3230 MS2 11/18 Linfeng_20120130_CHD1_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 509 2.49 0.00 0 15 100 2 556.29291 1111.57854 3.85 26.37 2246 2246 MS2 17/20 Linfeng_20120130_CHD1_10.raw High NMQDLVEDFK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 308 2.49 0.00 0 51 100 2 619.79205 1238.57683 3.71 46.42 5724 5724 MS2 15/18 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 784 2.49 0.00 0 42 100 2 602.32404 1203.64079 3.27 36.14 3252 3252 MS2 14/18 Linfeng_20120130_CHD1_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.48 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.29 4084 4084 MS2 15/18 Linfeng_20120130_CHD1_8.raw High NMQDLVEDFK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 330 2.48 0.00 0 59 100 2 619.79248 1238.57768 4.40 46.12 5979 5979 MS2 14/18 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 419 2.48 0.00 0 26 100 2 556.29071 1111.57414 -0.11 27.49 2256 2256 MS2 16/20 Linfeng_20120130_CHD1_5.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 233 2.48 0.00 0 29 25 2 547.26575 1093.52422 -2.82 20.22 1830 1830 MS2 14/16 Linfeng_091311_rIgG_1.raw High LAELEEALQK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 524 2.48 0.00 0 34 25 2 572.31445 1143.62163 -3.51 31.33 3577 3577 MS2 16/18 Linfeng_091311_rIgG_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.47 0.00 0 58 100 2 602.32440 1203.64153 3.88 36.57 4233 4233 MS2 16/18 Linfeng_20120130_CHD1_10.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 391 2.47 0.00 0 30 100 2 649.82153 1298.63579 4.65 32.64 2695 2695 MS2 14/20 Linfeng_20120130_CHD1_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 483 2.47 0.00 0 8 100 2 556.29291 1111.57854 3.85 27.98 1907 1907 MS2 15/20 Linfeng_20120130_CHD1_3.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 742 2.46 0.00 0 46 100 2 602.32367 1203.64006 2.66 35.71 3280 3280 MS2 15/18 Linfeng_20120130_CHD1_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 430 2.46 0.00 0 12 100 2 556.29242 1111.57756 2.97 27.60 1877 1877 MS2 13/20 Linfeng_20120130_CHD1_7.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 440 2.46 0.00 0 8 100 2 556.29315 1111.57903 4.29 27.43 1903 1903 MS2 16/20 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.45 0.00 2 5 100 3 436.89117 1308.65897 3.57 18.20 1201 1201 MS2 17/36 Linfeng_20120130_CHD1_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 384 2.44 0.00 0 11 25 2 705.86298 1410.71868 -2.63 28.41 3219 3219 MS2 17/26 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 787 2.44 0.00 0 35 100 2 602.32404 1203.64079 3.27 35.35 3781 3781 MS2 16/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.43 0.00 0 17 100 2 602.32434 1203.64141 3.77 36.30 3810 3810 MS2 14/18 Linfeng_20120130_CHD1_1.raw High YEELQQTAGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 201 2.43 0.00 0 7 25 2 597.79022 1194.57317 -1.52 20.92 2145 2145 MS2 17/18 Linfeng_091311_rIgG_9.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 87 2.43 0.00 0 6 25 2 621.78235 1242.55742 -5.09 25.74 2890 2890 MS2 16/18 Linfeng_091311_rIgG_2.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 277 2.43 0.00 0 21 25 2 547.26459 1093.52190 -4.94 21.85 2351 2351 MS2 13/16 Linfeng_091311_rIgG_8.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 443 2.43 0.00 0 15 100 2 556.29272 1111.57817 3.52 26.17 1902 1902 MS2 14/20 Linfeng_20120130_CHD1_1.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 435 2.42 0.00 0 0 100 2 556.29242 1111.57756 2.97 26.41 1767 1767 MS2 14/20 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.42 0.00 0 51 100 2 602.32404 1203.64079 3.27 36.11 3247 3247 MS2 15/18 Linfeng_20120130_CHD1_9.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 454 2.40 0.00 0 12 100 2 556.29266 1111.57805 3.41 27.79 2459 2459 MS2 15/20 Linfeng_20120130_CHD1_10.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 467 2.40 0.00 0 8 100 2 556.29205 1111.57683 2.31 29.70 2563 2563 MS2 14/20 Linfeng_20120130_CHD1_4.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 357 2.40 0.00 0 14 100 2 649.81476 1298.62224 -5.78 32.48 3328 3328 MS2 15/20 Linfeng_20120130_CHD1_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 785 2.39 0.00 0 15 100 2 602.32410 1203.64092 3.37 36.05 4128 4128 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 96 2.38 0.00 0 14 25 2 621.78271 1242.55815 -4.50 26.12 2895 2895 MS2 16/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.37 0.00 0 50 100 2 602.32397 1203.64067 3.17 35.93 3331 3331 MS2 14/18 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High NmQDLVEDFK Unambiguous 2 1 IPI00009867.3 M2(Oxidation) CID 1.0000 0.0000 1 1 238 2.37 0.00 0 32 100 2 627.78912 1254.57097 3.05 32.54 3157 3157 MS2 15/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 758 2.36 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.26 3403 3403 MS2 15/18 Linfeng_20120130_CHD1_2.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 91 2.36 0.00 0 7 25 2 621.78271 1242.55815 -4.50 25.78 2858 2858 MS2 16/18 Linfeng_091311_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 505 2.36 0.00 0 32 100 2 556.29083 1111.57439 0.11 27.66 2294 2294 MS2 14/20 Linfeng_20120130_CHD1_5.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 207 2.36 0.00 0 53 25 2 705.84698 1410.68669 5.10 18.32 1420 1420 MS2 16/28 Linfeng_122411_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 440 2.35 0.00 0 8 100 2 556.29218 1111.57707 2.53 27.12 1874 1874 MS2 11/20 Linfeng_20120130_CHD1_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 504 2.35 0.00 0 11 100 2 705.86700 1410.72673 3.08 28.88 2535 2535 MS2 19/26 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 446 2.35 0.00 0 26 100 2 556.29254 1111.57781 3.19 26.32 2240 2240 MS2 14/20 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 770 2.34 0.00 0 36 100 2 602.32428 1203.64128 3.67 36.40 3289 3289 MS2 13/18 Linfeng_20120130_CHD1_3.raw High TTAENEFVmLK Unambiguous 2 1 IPI00009867.3 M9(Oxidation) CID 1.0000 0.0000 1 1 419 2.33 0.00 0 44 100 2 649.82135 1298.63542 4.37 32.24 2936 2936 MS2 11/20 Linfeng_20120130_CHD1_1.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 563 2.33 0.00 2 5 100 2 654.83331 1308.65935 3.86 17.48 1151 1151 MS2 13/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.33 0.00 0 49 100 2 602.32385 1203.64043 2.96 35.99 3344 3344 MS2 13/18 Linfeng_20120130_CHD1_2.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 256 2.32 0.00 0 19 25 2 547.26581 1093.52434 -2.71 21.79 2385 2385 MS2 14/16 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 93 2.31 0.00 0 8 25 2 621.78278 1242.55828 -4.40 25.85 2861 2861 MS2 16/18 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.30 0.00 0 33 100 2 602.32391 1203.64055 3.07 36.29 3270 3270 MS2 14/18 Linfeng_20120130_CHD1_3.raw High SGGGGGGGFGR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 156 2.30 0.00 0 48 25 2 433.19818 865.38909 -2.41 14.15 1259 1259 MS2 14/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 491 2.29 0.00 0 31 100 2 556.29114 1111.57500 0.66 27.76 2315 2315 MS2 15/20 Linfeng_20120130_CHD1_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 748 2.29 0.00 0 54 100 2 602.32416 1203.64104 3.47 36.08 3240 3240 MS2 15/18 Linfeng_20120130_CHD1_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 268 2.27 0.00 0 21 25 2 547.26508 1093.52287 -4.05 21.84 2275 2275 MS2 13/16 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High VSLAGAcGVGGYGSR Unambiguous 2 1 IPI00009867.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 420 2.24 0.00 0 100 2 705.84424 1410.68120 1.21 26.69 2093 2093 MS2 17/28 Linfeng_20120130_CHD1_5.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.23 0.00 0 41 100 2 602.32361 1203.63994 2.56 36.60 3469 3469 MS2 13/18 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 711 2.23 0.00 0 37 100 2 602.32526 1203.64324 5.30 36.50 3854 3854 MS2 12/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 95 2.21 0.00 0 7 25 2 621.78241 1242.55754 -4.99 25.61 2562 2562 MS2 16/18 Linfeng_091311_rIgG_1.raw High AQYEEIANR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 485 2.21 0.00 0 30 100 2 547.26855 1093.52983 2.31 19.48 1262 1262 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 783 2.20 0.00 0 39 100 2 602.32397 1203.64067 3.17 35.75 3165 3165 MS2 13/18 Linfeng_20120130_CHD1_3.raw High TEEREQIK Unambiguous 4 1 IPI00009867.3 CID 1.0000 0.0000 1 1 548 2.20 0.00 1 29 25 2 516.77020 1032.53313 1.03 3.12 282 282 MS2 8/14 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 456 2.18 0.00 0 7 100 2 556.29218 1111.57707 2.53 26.77 1876 1876 MS2 13/20 Linfeng_20120130_CHD1_9.raw High GLGVGFGSGGGSSSSVK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 324 2.18 0.00 0 21 25 2 720.36322 1439.71916 4.57 26.59 2105 2105 MS2 15/32 Linfeng_122411_rIgG_9.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.17 0.00 0 36 100 2 602.32391 1203.64055 3.07 35.29 3770 3770 MS2 14/18 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 322 2.17 0.00 0 7 25 2 556.29205 1111.57683 2.31 23.24 1919 1919 MS2 17/20 Linfeng_122411_rIgG_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 287 2.16 0.00 0 17 25 2 556.28943 1111.57158 -2.41 27.76 3130 3130 MS2 17/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 530 2.14 0.00 2 0 100 2 654.83240 1308.65752 2.46 17.66 1131 1131 MS2 13/18 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 307 2.13 0.00 0 33 25 2 556.29205 1111.57683 2.31 26.78 2055 2055 MS2 15/20 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 442 2.13 0.00 0 17 100 2 556.29242 1111.57756 2.97 27.43 1900 1900 MS2 11/20 Linfeng_20120130_CHD1_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 461 2.11 0.00 0 30 100 2 556.29199 1111.57671 2.20 26.91 2134 2134 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High NMQDLVEDFK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 335 2.11 0.00 0 73 100 2 619.79218 1238.57707 3.91 46.53 6230 6230 MS2 12/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 315 2.10 0.00 0 11 25 2 556.29169 1111.57610 1.65 26.48 2505 2505 MS2 17/20 Linfeng_122411_rIgG_6.raw High SFSTASAITPSVSR Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 509 2.10 0.00 0 20 100 2 705.86755 1410.72783 3.86 28.94 2100 2100 MS2 14/26 Linfeng_20120130_CHD1_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 312 2.10 0.00 0 11 25 2 556.29236 1111.57744 2.86 24.12 1996 1996 MS2 18/20 Linfeng_122411_rIgG_3.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 429 2.10 0.00 0 6 100 2 556.29236 1111.57744 2.86 26.91 1813 1813 MS2 14/20 Linfeng_20120130_CHD1_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 292 2.09 0.00 0 70 100 2 729.33875 1457.67021 3.46 37.50 3503 3503 MS2 13/22 Linfeng_20120130_CHD1_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High NmQDLVEDFK Unambiguous 2 1 IPI00009867.3 M2(Oxidation) CID 1.0000 0.0000 1 1 261 2.09 0.00 0 40 100 2 627.78900 1254.57073 2.85 33.09 2782 2782 MS2 13/18 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.08 0.00 0 62 100 2 602.32410 1203.64092 3.37 35.96 3219 3219 MS2 15/18 Linfeng_20120130_CHD1_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.07 0.00 0 45 100 2 602.32471 1203.64214 4.38 36.80 4069 4069 MS2 12/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 313 2.07 0.00 0 42 25 2 556.29187 1111.57646 1.98 23.10 1875 1875 MS2 16/20 Linfeng_122411_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High TEAESWYQTK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 90 2.05 0.00 0 33 25 2 621.78247 1242.55766 -4.89 26.17 2874 2874 MS2 15/18 Linfeng_091311_rIgG_7.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 468 2.05 0.00 0 23 100 2 556.29187 1111.57646 1.98 29.74 2570 2570 MS2 12/20 Linfeng_20120130_CHD1_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 456 2.05 0.00 0 23 100 2 556.29327 1111.57927 4.51 26.75 1757 1757 MS2 14/20 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.04 0.00 0 35 100 2 602.32336 1203.63945 2.15 35.53 3238 3238 MS2 11/18 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 315 2.03 0.00 0 7 25 2 556.28925 1111.57121 -2.74 28.04 3132 3132 MS2 17/20 Linfeng_091311_rIgG_9.raw High NMQDLVEDFK Unambiguous 2 1 IPI00009867.3 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 58 100 2 619.79211 1238.57695 3.81 47.15 6206 6206 MS2 15/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High NmQDLVEDFK Unambiguous 2 1 IPI00009867.3 M2(Oxidation) CID 1.0000 0.0000 1 1 257 2.02 0.00 0 46 100 2 627.78973 1254.57219 4.02 33.20 2803 2803 MS2 13/18 Linfeng_20120130_CHD1_2.raw High VDALmDEINFmK Unambiguous 2 1 IPI00009867.3 M5(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 301 2.02 0.00 0 78 100 2 729.33954 1457.67180 4.55 37.15 4000 4000 MS2 13/22 Linfeng_20120130_CHD1_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High ISISTSGGSFR Unambiguous 1 1 IPI00009867.3 CID 1.0000 0.0000 1 1 304 2.00 0.00 0 15 25 2 556.29163 1111.57598 1.54 25.09 2263 2263 MS2 16/20 Linfeng_122411_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00171611.7 Histone H3.2 46.32 8 1 6 21 17.19 39.71 5 5 0.00 75.31 38.24 3 16 136 15.4 11.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 445 7.61 0.00 0 33 37 3 1177.24207 3529.71164 3.88 55.18 6290 6290 MS2 38/124 Linfeng_20120130_CHD1_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 7.31 0.00 0 0 100 3 1177.23730 3529.69736 -0.16 48.69 6801 6801 MS2 39/124 Linfeng_20120130_CHD1_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 7.13 0.00 0 2 6 3 1177.23767 3529.69846 0.15 55.19 7567 7567 MS2 39/124 Linfeng_20120130_CHD1_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 419 6.97 0.00 0 0 100 3 1177.23975 3529.70469 1.91 48.70 5581 5581 MS2 41/124 Linfeng_20120130_CHD1_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 6.87 0.00 0 0 100 3 1177.23962 3529.70432 1.81 48.74 5591 5591 MS2 39/124 Linfeng_20120130_CHD1_9.raw High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 177 6.79 0.00 0 11 9 4 879.18445 3513.71596 3.68 54.58 6631 6631 MS2 53/186 Linfeng_091311_rIgG_10.raw High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 412 6.44 0.00 0 0 4 3 1171.90576 3513.70273 -0.08 55.17 6284 6284 MS2 39/124 Linfeng_20120130_CHD1_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 436 6.30 0.00 0 0 100 3 1177.24170 3529.71054 3.57 58.19 6690 6690 MS2 31/124 Linfeng_20120130_CHD1_9.raw High FQSSAVMALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 5.35 0.00 0 2 5 4 879.18146 3513.70400 0.28 55.17 6285 6285 MS2 44/186 Linfeng_20120130_CHD1_9.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 406 4.92 0.00 0 2 7 4 883.18097 3529.70205 1.16 55.19 7568 7568 MS2 46/186 Linfeng_20120130_CHD1_10.raw High FQSSAVmALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00171611.7 M7(Oxidation); C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 415 3.88 0.00 0 1 32 4 883.18121 3529.70302 1.44 55.21 6298 6298 MS2 42/186 Linfeng_20120130_CHD1_9.raw High YQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 23 24 3 417.57394 1250.70728 -2.46 24.84 2814 2814 MS2 20/36 Linfeng_091311_rIgG_10.raw High RYQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 227 2.73 0.00 2 15 25 3 469.60736 1406.80753 -2.80 21.86 2395 2395 MS2 24/40 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 359 2.15 0.00 1 4 100 2 516.80292 1032.59856 3.51 24.07 1947 1947 MS2 10/16 Linfeng_20120130_CHD1_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 333 2.14 0.00 1 8 100 2 516.80243 1032.59758 2.57 24.61 1700 1700 MS2 13/16 Linfeng_20120130_CHD1_9.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 454 2.10 0.00 1 6 100 2 516.80225 1032.59722 2.21 23.34 1610 1610 MS2 10/16 Linfeng_20120130_CHD1_9.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 556 2.07 0.00 1 74 100 2 668.35175 1335.69621 4.37 31.61 2481 2481 MS2 13/20 Linfeng_20120130_CHD1_9.raw High STELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 2 510 2.06 0.00 0 47 25 2 416.24890 831.49053 -3.55 32.99 3934 3934 MS2 11/12 Linfeng_091311_rIgG_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 339 2.05 0.00 1 2 100 2 516.80237 1032.59746 2.45 23.70 1638 1638 MS2 11/16 Linfeng_20120130_CHD1_9.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 330 2.03 0.00 1 21 100 2 516.80286 1032.59844 3.39 23.80 1511 1511 MS2 11/16 Linfeng_20120130_CHD1_3.raw IPI00219038.9 Histone H3.3 46.32 8 1 6 18 36.82 39.71 5 8 0.00 32.26 38.24 3 10 136 15.3 11.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 8.07 0.00 0 7 4 3 1146.57715 3437.71689 3.54 54.43 6612 6612 MS2 39/124 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 494 6.99 0.00 0 1 6 3 1146.57336 3437.70554 0.23 55.17 6286 6286 MS2 38/124 Linfeng_20120130_CHD1_9.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 281 6.98 0.00 0 4 3 4 860.18506 3437.71840 3.98 54.43 6611 6611 MS2 51/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 295 6.78 0.00 0 35 25 4 860.18134 3437.70351 -0.36 53.16 6484 6484 MS2 50/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 491 5.79 0.00 0 9 9 4 860.18201 3437.70620 0.43 55.17 6287 6287 MS2 41/186 Linfeng_20120130_CHD1_9.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 290 4.59 0.00 0 1 11 5 688.34906 3437.71619 3.33 54.44 6613 6613 MS2 65/248 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 493 3.78 0.00 0 0 9 3 1146.57410 3437.70774 0.87 55.19 7570 7570 MS2 24/124 Linfeng_20120130_CHD1_10.raw High FQSAAIGALQEASEAYLVGLFEDTNLcAIHAK Unambiguous 1 1 IPI00219038.9 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 489 3.17 0.00 0 3 48 3 1146.57483 3437.70993 1.51 55.22 6301 6301 MS2 21/124 Linfeng_20120130_CHD1_9.raw High YQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 237 3.14 0.00 1 23 24 3 417.57394 1250.70728 -2.46 24.84 2814 2814 MS2 20/36 Linfeng_091311_rIgG_10.raw High RYQKSTELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 227 2.73 0.00 2 15 25 3 469.60736 1406.80753 -2.80 21.86 2395 2395 MS2 24/40 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 359 2.15 0.00 1 4 100 2 516.80292 1032.59856 3.51 24.07 1947 1947 MS2 10/16 Linfeng_20120130_CHD1_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 333 2.14 0.00 1 8 100 2 516.80243 1032.59758 2.57 24.61 1700 1700 MS2 13/16 Linfeng_20120130_CHD1_9.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 454 2.10 0.00 1 6 100 2 516.80225 1032.59722 2.21 23.34 1610 1610 MS2 10/16 Linfeng_20120130_CHD1_9.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 556 2.07 0.00 1 74 100 2 668.35175 1335.69621 4.37 31.61 2481 2481 MS2 13/20 Linfeng_20120130_CHD1_9.raw High STELLIR Unambiguous 9 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 2 510 2.06 0.00 0 47 25 2 416.24890 831.49053 -3.55 32.99 3934 3934 MS2 11/12 Linfeng_091311_rIgG_10.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 339 2.05 0.00 1 2 100 2 516.80237 1032.59746 2.45 23.70 1638 1638 MS2 11/16 Linfeng_20120130_CHD1_9.raw High YRPGTVALR Unambiguous 2 2 IPI00171611.7;IPI00219038.9 CID 1.0000 0.0000 1 1 330 2.03 0.00 1 21 100 2 516.80286 1032.59844 3.39 23.80 1511 1511 MS2 11/16 Linfeng_20120130_CHD1_3.raw IPI00939362.1 Putative uncharacterized protein S100A9 45.57 2 3 3 7 19.67 45.57 3 7 79 9.4 5.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NIETIINTFHQYSVK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 359 4.23 0.00 0 15 18 2 903.96918 1806.93108 -4.12 41.01 4973 4973 MS2 21/28 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 339 3.17 0.00 0 10 4 3 485.91089 1455.71811 -3.17 24.22 2724 2724 MS2 27/48 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 340 3.01 0.00 0 19 12 3 485.91098 1455.71839 -2.98 24.33 2624 2624 MS2 26/48 Linfeng_091311_rIgG_9.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 339 2.58 0.00 0 42 25 3 485.91098 1455.71839 -2.98 24.51 2676 2676 MS2 24/48 Linfeng_091311_rIgG_6.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 334 2.28 0.00 0 0 25 2 728.36316 1455.71904 -2.53 24.24 2727 2727 MS2 16/24 Linfeng_091311_rIgG_10.raw High KDLQNFLK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 412 2.25 0.00 1 13 25 2 503.28708 1005.56688 -5.89 27.49 3184 3184 MS2 13/14 Linfeng_091311_rIgG_10.raw High LGHPDTLNQGEFK Unambiguous 2 1 IPI00939362.1 CID 1.0000 0.0000 1 1 318 2.15 0.00 0 10 25 2 728.36334 1455.71941 -2.28 24.35 2627 2627 MS2 15/24 Linfeng_091311_rIgG_9.raw IPI00219806.7 Protein S100-A7 44.55 1 5 5 10 31.97 44.55 5 10 101 11.5 6.77 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KIDFSEFLSLLGDIATDYHK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 400 4.76 0.00 1 12 25 3 771.40137 2312.18955 3.71 53.78 6189 6189 MS2 34/76 Linfeng_122411_rIgG_5.raw High KGTNYLADVFEKK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 400 3.57 0.00 2 14 25 3 504.94080 1512.80783 1.39 27.95 2364 2364 MS2 27/48 Linfeng_122411_rIgG_10.raw High KGTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 397 3.47 0.00 1 12 25 3 462.24237 1384.71256 1.30 32.47 2972 2972 MS2 28/44 Linfeng_122411_rIgG_10.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 292 3.31 0.00 0 4 11 2 628.81244 1256.61760 1.44 36.90 3541 3541 MS2 16/20 Linfeng_122411_rIgG_10.raw High KIDFSEFLSLLGDIATDYHK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 389 3.13 0.00 1 21 25 4 578.80310 2312.19057 4.15 53.70 6180 6180 MS2 36/114 Linfeng_122411_rIgG_5.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 297 3.07 0.00 0 30 25 2 628.81171 1256.61614 0.27 36.89 3656 3656 MS2 16/20 Linfeng_122411_rIgG_3.raw High ENFPNFLSAcDK Unambiguous 1 1 IPI00219806.7 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 67 3.05 0.00 0 8 25 2 721.32452 1441.64177 0.05 36.03 3429 3429 MS2 17/22 Linfeng_122411_rIgG_10.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 300 2.83 0.00 0 21 25 2 628.81274 1256.61821 1.93 36.27 3203 3203 MS2 16/20 Linfeng_122411_rIgG_7.raw High KGTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 384 2.69 0.00 1 10 25 2 692.85980 1384.71233 1.13 32.54 2981 2981 MS2 15/22 Linfeng_122411_rIgG_10.raw High GTNYLADVFEK Unambiguous 1 1 IPI00219806.7 CID 1.0000 0.0000 1 1 304 2.09 0.00 0 37 25 2 628.81244 1256.61760 1.44 36.91 3438 3438 MS2 14/20 Linfeng_122411_rIgG_9.raw IPI00909059.5 "cDNA FLJ53910, highly similar to Keratin, type II cytoskeletal 6A" 44.11 5 2 27 352 323.89 34.02 19 126 213.99 28.04 16 76 474.78 28.97 14 150 535 57.8 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 313 5.43 0.00 0 2 100 3 1024.14465 3070.41941 3.28 39.83 4657 4657 MS2 36/104 Linfeng_20120130_CHD1_4.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 345 5.40 0.00 0 0 100 3 1024.14648 3070.42490 5.07 40.06 4216 4216 MS2 34/104 Linfeng_20120130_CHD1_2.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 308 5.39 0.00 0 3 100 3 1024.14478 3070.41977 3.40 39.79 4159 4159 MS2 33/104 Linfeng_20120130_CHD1_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 5.02 0.00 0 0 100 2 799.88666 1598.76604 4.27 30.00 2514 2514 MS2 18/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 501 5.01 0.00 0 5 100 2 724.39459 1447.78191 4.65 27.52 2114 2114 MS2 27/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 529 4.92 0.00 0 5 100 2 724.39429 1447.78130 4.22 28.05 2505 2505 MS2 27/32 Linfeng_20120130_CHD1_10.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 311 4.86 0.00 0 10 100 3 1024.14380 3070.41684 2.45 39.77 4153 4153 MS2 36/104 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 491 4.83 0.00 0 1 100 2 724.39478 1447.78227 4.90 27.57 2121 2121 MS2 26/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 4.80 0.00 0 8 100 2 724.39380 1447.78032 3.55 27.47 2105 2105 MS2 25/32 Linfeng_20120130_CHD1_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 329 4.71 0.00 0 11 100 3 1024.14563 3070.42234 4.24 39.56 4497 4497 MS2 31/104 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 510 4.64 0.00 0 9 100 2 724.39368 1447.78008 3.38 27.72 2364 2364 MS2 24/32 Linfeng_20120130_CHD1_8.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 322 4.63 0.00 0 6 100 3 1024.14539 3070.42160 4.00 39.71 4139 4139 MS2 33/104 Linfeng_20120130_CHD1_2.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 326 4.60 0.00 0 12 100 3 1024.14551 3070.42197 4.12 39.68 4133 4133 MS2 30/104 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 536 4.57 0.00 0 4 100 2 724.39410 1447.78093 3.97 27.93 2394 2394 MS2 27/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 483 4.44 0.00 0 12 100 2 724.39392 1447.78057 3.72 27.17 2359 2359 MS2 23/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 519 4.43 0.00 0 15 100 2 724.39398 1447.78069 3.80 27.47 2325 2325 MS2 24/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 522 4.42 0.00 0 10 100 2 724.39404 1447.78081 3.89 27.77 2373 2373 MS2 23/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 501 4.34 0.00 0 3 100 2 724.39423 1447.78118 4.14 27.60 2426 2426 MS2 24/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 532 4.34 0.00 0 8 100 2 724.39392 1447.78057 3.72 28.20 2440 2440 MS2 25/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 543 4.31 0.00 0 16 100 2 724.39417 1447.78105 4.06 27.73 2188 2188 MS2 22/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 525 4.28 0.00 0 5 100 2 724.39471 1447.78215 4.81 27.60 2125 2125 MS2 26/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 547 4.26 0.00 0 15 100 2 724.39313 1447.77898 2.62 27.93 2347 2347 MS2 25/32 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 509 4.20 0.00 0 7 100 2 724.39374 1447.78020 3.47 28.08 2419 2419 MS2 23/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 574 4.16 0.00 0 3 100 2 724.39288 1447.77849 2.29 28.00 2404 2404 MS2 25/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 528 4.15 0.00 0 12 100 2 724.39417 1447.78105 4.06 27.79 2199 2199 MS2 23/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 559 4.15 0.00 0 8 100 2 724.39386 1447.78044 3.63 27.99 2234 2234 MS2 24/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 4.14 0.00 0 9 100 2 724.39398 1447.78069 3.80 29.35 2710 2710 MS2 20/32 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 529 4.11 0.00 0 16 100 2 724.39301 1447.77873 2.45 27.90 2340 2340 MS2 23/32 Linfeng_20120130_CHD1_5.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 309 4.11 0.00 0 4 100 3 1024.14490 3070.42014 3.52 39.69 3932 3932 MS2 31/104 Linfeng_20120130_CHD1_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 4.06 0.00 0 18 100 2 724.39313 1447.77898 2.62 28.01 2021 2021 MS2 21/32 Linfeng_20120130_CHD1_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 394 3.97 0.00 0 15 100 2 799.88568 1598.76409 3.05 30.35 2310 2310 MS2 17/32 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 3.95 0.00 0 19 100 2 724.39307 1447.77886 2.54 28.12 2036 2036 MS2 21/32 Linfeng_20120130_CHD1_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 3.94 0.00 0 14 100 2 724.39404 1447.78081 3.89 29.29 2701 2701 MS2 19/32 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 560 3.84 0.00 0 10 100 2 724.39276 1447.77825 2.12 28.38 2473 2473 MS2 20/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 3.78 0.00 0 20 100 2 724.39288 1447.77849 2.29 28.05 2027 2027 MS2 22/32 Linfeng_20120130_CHD1_9.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.76 0.00 0 13 100 2 799.88519 1598.76311 2.44 30.07 2762 2762 MS2 17/32 Linfeng_20120130_CHD1_8.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 534 3.72 0.00 0 13 100 2 724.39319 1447.77910 2.71 27.85 1998 1998 MS2 23/32 Linfeng_20120130_CHD1_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 424 3.63 0.00 0 15 100 2 799.88513 1598.76299 2.37 30.13 2781 2781 MS2 18/32 Linfeng_20120130_CHD1_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 445 3.40 0.00 0 15 100 2 799.88550 1598.76372 2.82 29.91 2800 2800 MS2 17/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 393 3.39 0.00 0 16 25 2 724.38947 1447.77165 -2.44 27.27 3101 3101 MS2 22/32 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 3.32 0.00 0 7 25 2 799.88513 1598.76299 2.37 26.89 2388 2388 MS2 19/32 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 608 3.27 0.00 0 15 100 2 611.81952 1222.63176 0.25 31.36 3075 3075 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 3.08 0.00 0 19 100 2 799.88617 1598.76506 3.66 30.26 2678 2678 MS2 17/32 Linfeng_20120130_CHD1_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.08 0.00 0 9 25 2 799.88464 1598.76201 1.75 28.06 2717 2717 MS2 18/32 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High GMQDLVEDFK Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 400 3.05 0.00 0 12 100 2 591.28137 1181.55547 3.97 45.47 5834 5834 MS2 15/18 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 397 3.00 0.00 0 12 25 2 724.38983 1447.77239 -1.93 27.27 3064 3064 MS2 18/32 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 255 2.98 0.00 0 9 25 2 799.88348 1598.75969 0.30 26.18 2509 2509 MS2 19/32 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 212 2.97 0.00 0 13 25 2 506.75488 1012.50249 -3.31 24.33 2625 2625 MS2 15/18 Linfeng_091311_rIgG_9.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 605 2.96 0.00 0 21 100 2 611.81952 1222.63176 0.25 31.41 3086 3086 MS2 15/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 235 2.94 0.00 0 34 25 2 506.75726 1012.50725 1.39 20.45 1716 1716 MS2 15/18 Linfeng_122411_rIgG_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 453 2.90 0.00 1 11 25 3 453.24719 1357.72702 -3.84 30.04 3478 3478 MS2 24/44 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.88 0.00 0 22 25 2 704.36133 1407.71538 2.76 39.90 4062 4062 MS2 18/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.87 0.00 0 7 100 2 602.32452 1203.64177 4.08 36.29 4176 4176 MS2 16/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.87 0.00 0 12 25 2 799.88080 1598.75432 -3.06 29.00 3336 3336 MS2 20/32 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.86 0.00 0 23 100 2 602.32355 1203.63982 2.46 35.44 3799 3799 MS2 16/18 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 675 2.85 0.00 0 17 100 2 602.32294 1203.63860 1.44 35.55 3819 3819 MS2 14/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 788 2.85 0.00 0 18 100 2 602.32404 1203.64079 3.27 35.90 3722 3722 MS2 15/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 448 2.84 0.00 1 18 25 3 453.24771 1357.72858 -2.70 30.25 3431 3431 MS2 24/44 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.84 0.00 0 11 25 2 704.36102 1407.71477 2.32 40.03 4238 4238 MS2 18/22 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High SGFSSVSVSR Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 222 2.82 0.00 0 9 25 2 506.75400 1012.50072 -5.06 23.87 2331 2331 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High GMQDLVEDFK Unambiguous 3 1 IPI00909059.5 CID 1.0000 0.0000 1 1 408 2.80 0.00 0 7 100 2 591.28162 1181.55596 4.39 45.43 5975 5975 MS2 15/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.79 0.00 2 10 100 3 436.89084 1308.65796 2.80 17.26 1401 1401 MS2 16/36 Linfeng_20120130_CHD1_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 359 2.78 0.00 0 32 25 2 704.35797 1407.70867 -2.01 40.84 4893 4893 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 660 2.77 0.00 0 24 100 2 558.30286 1115.59844 3.67 33.33 3519 3519 MS2 16/18 Linfeng_20120130_CHD1_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 2.75 0.00 0 12 25 2 799.88153 1598.75578 -2.14 29.19 3288 3288 MS2 20/32 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.74 0.00 0 18 100 2 611.81934 1222.63140 -0.05 31.85 3186 3186 MS2 16/20 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 502 2.74 0.00 0 11 100 2 554.27618 1107.54509 1.93 19.62 1273 1273 MS2 14/16 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 723 2.73 0.00 0 8 100 2 602.32367 1203.64006 2.66 35.26 3570 3570 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 746 2.71 0.00 0 8 100 2 602.32422 1203.64116 3.57 36.11 3770 3770 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 738 2.70 0.00 0 42 100 2 602.32416 1203.64104 3.47 36.06 3360 3360 MS2 15/18 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.70 0.00 0 13 100 2 554.27686 1107.54643 3.14 17.96 1214 1214 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.70 0.00 0 34 25 2 704.36005 1407.71282 0.93 39.89 4042 4042 MS2 18/22 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.69 0.00 0 36 25 3 533.59131 1598.75937 0.10 26.31 2527 2527 MS2 25/64 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 595 2.69 0.00 2 10 100 3 436.89072 1308.65760 2.52 17.32 1108 1108 MS2 18/36 Linfeng_20120130_CHD1_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 13 25 2 704.36017 1407.71306 1.11 39.88 3652 3652 MS2 18/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.67 0.00 0 38 25 2 704.36121 1407.71514 2.58 39.80 4162 4162 MS2 18/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.66 0.00 0 6 100 2 554.27667 1107.54607 2.81 17.71 1135 1135 MS2 14/16 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.66 0.00 0 22 25 2 704.35767 1407.70806 -2.45 40.92 4840 4840 MS2 17/22 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 790 2.64 0.00 0 6 100 2 602.32404 1203.64079 3.27 36.12 3929 3929 MS2 16/18 Linfeng_20120130_CHD1_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.63 0.00 0 42 25 2 704.35791 1407.70854 -2.10 41.07 4822 4822 MS2 18/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.63 0.00 0 16 100 2 602.32379 1203.64031 2.86 35.35 3591 3591 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 536 2.62 0.00 1 24 25 3 453.24814 1357.72986 -1.75 30.09 3440 3440 MS2 25/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 589 2.62 0.00 2 13 100 3 436.89093 1308.65824 3.01 17.53 1092 1092 MS2 16/36 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 2.58 0.00 0 11 100 2 554.27679 1107.54631 3.03 19.74 1344 1344 MS2 14/16 Linfeng_20120130_CHD1_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.58 0.00 2 9 100 3 436.89099 1308.65842 3.15 17.65 1106 1106 MS2 17/36 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.58 0.00 0 17 100 2 602.32361 1203.63994 2.56 35.73 4059 4059 MS2 15/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.57 0.00 0 19 25 2 704.35681 1407.70635 -3.66 41.01 4801 4801 MS2 17/22 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.57 0.00 0 34 100 2 602.32428 1203.64128 3.67 36.52 4223 4223 MS2 16/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.57 0.00 0 12 100 2 602.32404 1203.64079 3.27 36.38 3427 3427 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.57 0.00 2 12 100 3 436.89081 1308.65787 2.73 17.92 1286 1286 MS2 17/36 Linfeng_20120130_CHD1_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 767 2.56 0.00 0 13 100 2 602.32446 1203.64165 3.98 36.12 4143 4143 MS2 16/18 Linfeng_20120130_CHD1_10.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 430 2.56 0.00 1 6 100 2 675.86902 1350.73076 3.21 24.80 2031 2031 MS2 12/22 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.55 0.00 0 18 100 2 602.32379 1203.64031 2.86 35.93 4102 4102 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 747 2.55 0.00 0 67 100 2 602.32428 1203.64128 3.67 35.89 3206 3206 MS2 13/18 Linfeng_20120130_CHD1_9.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 2.55 0.00 1 21 25 3 453.24808 1357.72968 -1.89 30.27 3451 3451 MS2 24/44 Linfeng_091311_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 389 2.54 0.00 1 12 25 2 679.36774 1357.72820 -2.98 30.14 3179 3179 MS2 18/22 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.54 0.00 0 15 100 2 602.32379 1203.64031 2.86 35.17 3548 3548 MS2 15/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 766 2.54 0.00 0 12 100 2 602.32422 1203.64116 3.57 35.70 3849 3849 MS2 16/18 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.53 0.00 0 26 20 2 704.35791 1407.70854 -2.10 40.85 4632 4632 MS2 18/22 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 539 2.51 0.00 1 24 25 3 453.24838 1357.73059 -1.21 28.40 2815 2815 MS2 24/44 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 685 2.51 0.00 0 26 100 2 602.32281 1203.63835 1.24 36.40 2943 2943 MS2 14/18 Linfeng_20120130_CHD1_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 756 2.50 0.00 0 13 100 2 602.32355 1203.63982 2.46 35.61 4030 4030 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 600 2.50 0.00 2 19 100 3 436.89096 1308.65833 3.08 17.18 1130 1130 MS2 17/36 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 765 2.50 0.00 0 14 100 2 602.32385 1203.64043 2.96 35.56 4019 4019 MS2 16/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.50 0.00 0 43 100 2 602.32404 1203.64079 3.27 36.06 3230 3230 MS2 11/18 Linfeng_20120130_CHD1_3.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 784 2.49 0.00 0 42 100 2 602.32404 1203.64079 3.27 36.14 3252 3252 MS2 14/18 Linfeng_20120130_CHD1_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.48 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.29 4084 4084 MS2 15/18 Linfeng_20120130_CHD1_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.47 0.00 0 58 100 2 602.32440 1203.64153 3.88 36.57 4233 4233 MS2 16/18 Linfeng_20120130_CHD1_10.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 742 2.46 0.00 0 46 100 2 602.32367 1203.64006 2.66 35.71 3280 3280 MS2 15/18 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.45 0.00 2 5 100 3 436.89117 1308.65897 3.57 18.20 1201 1201 MS2 17/36 Linfeng_20120130_CHD1_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 787 2.44 0.00 0 35 100 2 602.32404 1203.64079 3.27 35.35 3781 3781 MS2 16/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.43 0.00 0 17 100 2 602.32434 1203.64141 3.77 36.30 3810 3810 MS2 14/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.42 0.00 0 51 100 2 602.32404 1203.64079 3.27 36.11 3247 3247 MS2 15/18 Linfeng_20120130_CHD1_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 494 2.42 0.00 0 8 100 2 554.27698 1107.54668 3.37 19.64 1297 1297 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.40 0.00 0 33 100 2 611.82208 1222.63689 4.45 31.46 2783 2783 MS2 13/20 Linfeng_20120130_CHD1_1.raw High EYQELMNVK Unambiguous 11 3 IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 443 2.39 0.00 0 21 100 2 577.28339 1153.55950 3.18 27.07 2040 2040 MS2 10/16 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 785 2.39 0.00 0 15 100 2 602.32410 1203.64092 3.37 36.05 4128 4128 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 585 2.37 0.00 0 40 100 2 611.82159 1222.63591 3.65 31.65 2523 2523 MS2 12/20 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.37 0.00 0 50 100 2 602.32397 1203.64067 3.17 35.93 3331 3331 MS2 14/18 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 758 2.36 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.26 3403 3403 MS2 15/18 Linfeng_20120130_CHD1_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 770 2.34 0.00 0 36 100 2 602.32428 1203.64128 3.67 36.40 3289 3289 MS2 13/18 Linfeng_20120130_CHD1_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 563 2.33 0.00 2 5 100 2 654.83331 1308.65935 3.86 17.48 1151 1151 MS2 13/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.33 0.00 0 49 100 2 602.32385 1203.64043 2.96 35.99 3344 3344 MS2 13/18 Linfeng_20120130_CHD1_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 603 2.32 0.00 0 13 100 2 611.81995 1222.63262 0.95 31.99 3217 3217 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 670 2.32 0.00 0 43 100 2 558.30286 1115.59844 3.67 34.19 3703 3703 MS2 15/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.30 0.00 0 33 100 2 602.32391 1203.64055 3.07 36.29 3270 3270 MS2 14/18 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 748 2.29 0.00 0 54 100 2 602.32416 1203.64104 3.47 36.08 3240 3240 MS2 15/18 Linfeng_20120130_CHD1_9.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.23 0.00 0 41 100 2 602.32361 1203.63994 2.56 36.60 3469 3469 MS2 13/18 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 711 2.23 0.00 0 37 100 2 602.32526 1203.64324 5.30 36.50 3854 3854 MS2 12/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 783 2.20 0.00 0 39 100 2 602.32397 1203.64067 3.17 35.75 3165 3165 MS2 13/18 Linfeng_20120130_CHD1_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 2.20 0.00 0 10 25 2 799.88184 1598.75640 -1.76 29.21 3257 3257 MS2 19/32 Linfeng_091311_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.17 0.00 0 36 100 2 602.32391 1203.64055 3.07 35.29 3770 3770 MS2 14/18 Linfeng_20120130_CHD1_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 593 2.16 0.00 0 29 100 2 611.82196 1222.63664 4.25 31.51 2793 2793 MS2 14/20 Linfeng_20120130_CHD1_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 530 2.14 0.00 2 0 100 2 654.83240 1308.65752 2.46 17.66 1131 1131 MS2 13/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.10 0.00 0 41 100 2 611.82184 1222.63640 4.05 31.33 2898 2898 MS2 13/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.08 0.00 0 62 100 2 602.32410 1203.64092 3.37 35.96 3219 3219 MS2 15/18 Linfeng_20120130_CHD1_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.07 0.00 0 45 100 2 602.32471 1203.64214 4.38 36.80 4069 4069 MS2 12/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 627 2.05 0.00 0 75 100 2 558.30237 1115.59746 2.80 33.32 3334 3334 MS2 12/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.04 0.00 0 35 100 2 602.32336 1203.63945 2.15 35.53 3238 3238 MS2 11/18 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 579 2.02 0.00 0 44 100 2 611.82172 1222.63616 3.85 32.20 2610 2610 MS2 12/20 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00853641.1 Putative uncharacterized protein HBE1 43.68 2 3 3 4 13.99 43.68 3 4 87 9.5 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FFDSFGNLSSPSAILGNPK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 265 4.92 0.00 0 0 25 2 999.50476 1998.00224 2.72 42.21 4221 4221 MS2 26/36 Linfeng_122411_rIgG_10.raw High FFDSFGNLSSPSAILGNPK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 342 4.62 0.00 0 34 25 3 666.67291 1998.00418 3.69 42.17 4215 4215 MS2 34/72 Linfeng_122411_rIgG_10.raw High AAVTSLWSK Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 333 2.39 0.00 0 18 25 2 481.76968 962.53209 1.55 27.29 2276 2276 MS2 15/16 Linfeng_122411_rIgG_10.raw High LLVVYPWTQR Unambiguous 2 1 IPI00853641.1 CID 1.0000 0.0000 1 1 227 2.05 0.00 0 38 25 2 637.86804 1274.72881 2.51 38.32 3723 3723 MS2 15/18 Linfeng_122411_rIgG_10.raw IPI00956313.1 58 kDa protein 43.54 6 2 27 350 320.10 33.58 19 125 211.05 25.83 15 75 473.39 28.60 14 150 542 58.3 8.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 5.83 0.00 1 14 25 4 605.32056 2418.26040 3.80 52.63 5666 5666 MS2 48/120 Linfeng_122411_rIgG_3.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 313 5.43 0.00 0 2 100 3 1024.14465 3070.41941 3.28 39.83 4657 4657 MS2 36/104 Linfeng_20120130_CHD1_4.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 345 5.40 0.00 0 0 100 3 1024.14648 3070.42490 5.07 40.06 4216 4216 MS2 34/104 Linfeng_20120130_CHD1_2.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 308 5.39 0.00 0 3 100 3 1024.14478 3070.41977 3.40 39.79 4159 4159 MS2 33/104 Linfeng_20120130_CHD1_2.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 5.02 0.00 0 0 100 2 799.88666 1598.76604 4.27 30.00 2514 2514 MS2 18/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 501 5.01 0.00 0 5 100 2 724.39459 1447.78191 4.65 27.52 2114 2114 MS2 27/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 529 4.92 0.00 0 5 100 2 724.39429 1447.78130 4.22 28.05 2505 2505 MS2 27/32 Linfeng_20120130_CHD1_10.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 311 4.86 0.00 0 10 100 3 1024.14380 3070.41684 2.45 39.77 4153 4153 MS2 36/104 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 491 4.83 0.00 0 1 100 2 724.39478 1447.78227 4.90 27.57 2121 2121 MS2 26/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 4.80 0.00 0 8 100 2 724.39380 1447.78032 3.55 27.47 2105 2105 MS2 25/32 Linfeng_20120130_CHD1_1.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 329 4.71 0.00 0 11 100 3 1024.14563 3070.42234 4.24 39.56 4497 4497 MS2 31/104 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 510 4.64 0.00 0 9 100 2 724.39368 1447.78008 3.38 27.72 2364 2364 MS2 24/32 Linfeng_20120130_CHD1_8.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 322 4.63 0.00 0 6 100 3 1024.14539 3070.42160 4.00 39.71 4139 4139 MS2 33/104 Linfeng_20120130_CHD1_2.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 326 4.60 0.00 0 12 100 3 1024.14551 3070.42197 4.12 39.68 4133 4133 MS2 30/104 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 536 4.57 0.00 0 4 100 2 724.39410 1447.78093 3.97 27.93 2394 2394 MS2 27/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 483 4.44 0.00 0 12 100 2 724.39392 1447.78057 3.72 27.17 2359 2359 MS2 23/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 519 4.43 0.00 0 15 100 2 724.39398 1447.78069 3.80 27.47 2325 2325 MS2 24/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 522 4.42 0.00 0 10 100 2 724.39404 1447.78081 3.89 27.77 2373 2373 MS2 23/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 501 4.34 0.00 0 3 100 2 724.39423 1447.78118 4.14 27.60 2426 2426 MS2 24/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 532 4.34 0.00 0 8 100 2 724.39392 1447.78057 3.72 28.20 2440 2440 MS2 25/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 543 4.31 0.00 0 16 100 2 724.39417 1447.78105 4.06 27.73 2188 2188 MS2 22/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 525 4.28 0.00 0 5 100 2 724.39471 1447.78215 4.81 27.60 2125 2125 MS2 26/32 Linfeng_20120130_CHD1_1.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 547 4.26 0.00 0 15 100 2 724.39313 1447.77898 2.62 27.93 2347 2347 MS2 25/32 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 4.22 0.00 1 14 25 3 806.75848 2418.26090 4.01 52.59 5662 5662 MS2 36/80 Linfeng_122411_rIgG_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 509 4.20 0.00 0 7 100 2 724.39374 1447.78020 3.47 28.08 2419 2419 MS2 23/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 574 4.16 0.00 0 3 100 2 724.39288 1447.77849 2.29 28.00 2404 2404 MS2 25/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 528 4.15 0.00 0 12 100 2 724.39417 1447.78105 4.06 27.79 2199 2199 MS2 23/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 559 4.15 0.00 0 8 100 2 724.39386 1447.78044 3.63 27.99 2234 2234 MS2 24/32 Linfeng_20120130_CHD1_4.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 4.14 0.00 0 9 100 2 724.39398 1447.78069 3.80 29.35 2710 2710 MS2 20/32 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 400 4.12 0.00 0 7 25 3 630.99481 1890.96988 -0.54 45.63 5159 5159 MS2 31/56 Linfeng_122411_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 529 4.11 0.00 0 16 100 2 724.39301 1447.77873 2.45 27.90 2340 2340 MS2 23/32 Linfeng_20120130_CHD1_5.raw High ALYDAELSQmQTHISDTSVVLSmDNNR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 M10(Oxidation); M23(Oxidation) CID 1.0000 0.0000 1 1 309 4.11 0.00 0 4 100 3 1024.14490 3070.42014 3.52 39.69 3932 3932 MS2 31/104 Linfeng_20120130_CHD1_3.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 4.06 0.00 0 18 100 2 724.39313 1447.77898 2.62 28.01 2021 2021 MS2 21/32 Linfeng_20120130_CHD1_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 406 4.01 0.00 0 0 25 3 630.99274 1890.96366 -3.83 46.74 5567 5567 MS2 29/56 Linfeng_091311_rIgG_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 437 3.99 0.00 0 11 25 3 630.99634 1890.97446 1.88 45.84 4406 4406 MS2 28/56 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 394 3.97 0.00 0 15 100 2 799.88568 1598.76409 3.05 30.35 2310 2310 MS2 17/32 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 3.95 0.00 0 19 100 2 724.39307 1447.77886 2.54 28.12 2036 2036 MS2 21/32 Linfeng_20120130_CHD1_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 3.94 0.00 0 14 100 2 724.39404 1447.78081 3.89 29.29 2701 2701 MS2 19/32 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 560 3.84 0.00 0 10 100 2 724.39276 1447.77825 2.12 28.38 2473 2473 MS2 20/32 Linfeng_20120130_CHD1_8.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 531 3.78 0.00 0 20 100 2 724.39288 1447.77849 2.29 28.05 2027 2027 MS2 22/32 Linfeng_20120130_CHD1_9.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.76 0.00 0 13 100 2 799.88519 1598.76311 2.44 30.07 2762 2762 MS2 17/32 Linfeng_20120130_CHD1_8.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 342 3.75 0.00 1 46 25 3 806.75787 2418.25907 3.25 54.12 6429 6429 MS2 34/80 Linfeng_091311_rIgG_5.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 534 3.72 0.00 0 13 100 2 724.39319 1447.77910 2.71 27.85 1998 1998 MS2 23/32 Linfeng_20120130_CHD1_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 3.72 0.00 0 24 25 3 630.99738 1890.97757 3.53 45.74 4804 4804 MS2 28/56 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 393 3.69 0.00 0 41 25 3 630.99451 1890.96897 -1.02 47.11 5686 5686 MS2 25/56 Linfeng_091311_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 424 3.63 0.00 0 15 100 2 799.88513 1598.76299 2.37 30.13 2781 2781 MS2 18/32 Linfeng_20120130_CHD1_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 399 3.62 0.00 0 13 25 3 630.99463 1890.96933 -0.83 47.03 5737 5737 MS2 27/56 Linfeng_091311_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 415 3.57 0.00 0 7 25 3 630.99371 1890.96659 -2.28 46.49 5363 5363 MS2 29/56 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 407 3.44 0.00 0 17 25 3 630.99408 1890.96769 -1.70 46.92 5555 5555 MS2 26/56 Linfeng_091311_rIgG_9.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 3 25 3 630.99451 1890.96897 -1.02 46.66 5559 5559 MS2 28/56 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 395 3.41 0.00 0 12 25 3 630.99432 1890.96842 -1.31 47.02 5567 5567 MS2 24/56 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 445 3.40 0.00 0 15 100 2 799.88550 1598.76372 2.82 29.91 2800 2800 MS2 17/32 Linfeng_20120130_CHD1_10.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 393 3.39 0.00 0 16 25 2 724.38947 1447.77165 -2.44 27.27 3101 3101 MS2 22/32 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.39 0.00 0 5 25 3 630.99402 1890.96750 -1.80 46.59 5622 5622 MS2 27/56 Linfeng_091311_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 408 3.36 0.00 0 6 25 3 630.99396 1890.96732 -1.89 46.84 5553 5553 MS2 29/56 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 422 3.36 0.00 0 22 25 3 630.99713 1890.97684 3.14 45.65 4947 4947 MS2 23/56 Linfeng_122411_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 257 3.32 0.00 0 7 25 2 799.88513 1598.76299 2.37 26.89 2388 2388 MS2 19/32 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 7 25 3 630.99359 1890.96622 -2.48 46.87 5546 5546 MS2 29/56 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 608 3.27 0.00 0 15 100 2 611.81952 1222.63176 0.25 31.36 3075 3075 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 2 1 2 554.27295 1107.53862 -3.91 4.16 448 448 MS2 14/16 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 3.08 0.00 0 19 100 2 799.88617 1598.76506 3.66 30.26 2678 2678 MS2 17/32 Linfeng_20120130_CHD1_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 3.08 0.00 0 9 25 2 799.88464 1598.76201 1.75 28.06 2717 2717 MS2 18/32 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 325 3.02 0.00 0 35 25 2 945.98669 1890.96611 -2.53 46.53 5367 5367 MS2 21/28 Linfeng_091311_rIgG_1.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High AIGGGLSSVGGGSSTIK Unambiguous 6 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 397 3.00 0.00 0 12 25 2 724.38983 1447.77239 -1.93 27.27 3064 3064 MS2 18/32 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVKAQYEEIAQR Unambiguous 9 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 334 2.98 0.00 1 0 25 3 806.75891 2418.26218 4.54 52.83 5685 5685 MS2 29/80 Linfeng_122411_rIgG_2.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.98 0.00 0 20 25 3 630.99695 1890.97629 2.85 45.79 4678 4678 MS2 20/56 Linfeng_122411_rIgG_10.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 255 2.98 0.00 0 9 25 2 799.88348 1598.75969 0.30 26.18 2509 2509 MS2 19/32 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.97 0.00 0 3 14 2 554.27307 1107.53887 -3.69 21.79 2304 2304 MS2 14/16 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 605 2.96 0.00 0 21 100 2 611.81952 1222.63176 0.25 31.41 3086 3086 MS2 15/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 312 2.95 0.00 0 3 1 2 554.27490 1107.54253 -0.38 3.14 290 290 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 321 2.95 0.00 0 19 25 2 554.27283 1107.53838 -4.13 22.00 2286 2286 MS2 14/16 Linfeng_091311_rIgG_5.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 300 2.92 0.00 0 36 25 2 554.27277 1107.53826 -4.24 22.08 2309 2309 MS2 14/16 Linfeng_091311_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 453 2.90 0.00 1 11 25 3 453.24719 1357.72702 -3.84 30.04 3478 3478 MS2 24/44 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 348 2.88 0.00 0 22 25 2 704.36133 1407.71538 2.76 39.90 4062 4062 MS2 18/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.87 0.00 0 7 100 2 602.32452 1203.64177 4.08 36.29 4176 4176 MS2 16/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.87 0.00 0 31 25 2 554.27362 1107.53996 -2.70 21.77 2294 2294 MS2 14/16 Linfeng_091311_rIgG_4.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.87 0.00 0 12 25 2 799.88080 1598.75432 -3.06 29.00 3336 3336 MS2 20/32 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.86 0.00 0 23 100 2 602.32355 1203.63982 2.46 35.44 3799 3799 MS2 16/18 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 675 2.85 0.00 0 17 100 2 602.32294 1203.63860 1.44 35.55 3819 3819 MS2 14/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 788 2.85 0.00 0 18 100 2 602.32404 1203.64079 3.27 35.90 3722 3722 MS2 15/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 448 2.84 0.00 1 18 25 3 453.24771 1357.72858 -2.70 30.25 3431 3431 MS2 24/44 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.84 0.00 0 11 25 2 704.36102 1407.71477 2.32 40.03 4238 4238 MS2 18/22 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.83 0.00 0 4 22 2 554.27277 1107.53826 -4.24 22.07 2342 2342 MS2 15/16 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.79 0.00 2 10 100 3 436.89084 1308.65796 2.80 17.26 1401 1401 MS2 16/36 Linfeng_20120130_CHD1_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 359 2.78 0.00 0 32 25 2 704.35797 1407.70867 -2.01 40.84 4893 4893 MS2 18/22 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 660 2.77 0.00 0 24 100 2 558.30286 1115.59844 3.67 33.33 3519 3519 MS2 16/18 Linfeng_20120130_CHD1_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 296 2.76 0.00 0 45 25 2 554.27307 1107.53887 -3.69 21.71 2322 2322 MS2 14/16 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High QNLEPLFEQYINNLR Unambiguous 10 3 IPI00009867.3;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 8 25 3 630.99689 1890.97611 2.75 45.94 4734 4734 MS2 22/56 Linfeng_122411_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 2.75 0.00 0 12 25 2 799.88153 1598.75578 -2.14 29.19 3288 3288 MS2 20/32 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.74 0.00 0 18 100 2 611.81934 1222.63140 -0.05 31.85 3186 3186 MS2 16/20 Linfeng_20120130_CHD1_10.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 502 2.74 0.00 0 11 100 2 554.27618 1107.54509 1.93 19.62 1273 1273 MS2 14/16 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 723 2.73 0.00 0 8 100 2 602.32367 1203.64006 2.66 35.26 3570 3570 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 746 2.71 0.00 0 8 100 2 602.32422 1203.64116 3.57 36.11 3770 3770 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 738 2.70 0.00 0 42 100 2 602.32416 1203.64104 3.47 36.06 3360 3360 MS2 15/18 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 449 2.70 0.00 0 13 100 2 554.27686 1107.54643 3.14 17.96 1214 1214 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 356 2.70 0.00 0 34 25 2 704.36005 1407.71282 0.93 39.89 4042 4042 MS2 18/22 Linfeng_122411_rIgG_3.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 307 2.70 0.00 0 26 25 2 554.27258 1107.53789 -4.57 22.01 2375 2375 MS2 14/16 Linfeng_091311_rIgG_8.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.69 0.00 0 36 25 3 533.59131 1598.75937 0.10 26.31 2527 2527 MS2 25/64 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 595 2.69 0.00 2 10 100 3 436.89072 1308.65760 2.52 17.32 1108 1108 MS2 18/36 Linfeng_20120130_CHD1_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 360 2.68 0.00 0 13 25 2 704.36017 1407.71306 1.11 39.88 3652 3652 MS2 18/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 357 2.67 0.00 0 38 25 2 704.36121 1407.71514 2.58 39.80 4162 4162 MS2 18/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 513 2.66 0.00 0 6 100 2 554.27667 1107.54607 2.81 17.71 1135 1135 MS2 14/16 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 315 2.66 0.00 0 22 25 2 704.35767 1407.70806 -2.45 40.92 4840 4840 MS2 17/22 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 790 2.64 0.00 0 6 100 2 602.32404 1203.64079 3.27 36.12 3929 3929 MS2 16/18 Linfeng_20120130_CHD1_4.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.63 0.00 0 42 25 2 704.35791 1407.70854 -2.10 41.07 4822 4822 MS2 18/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.63 0.00 0 16 100 2 602.32379 1203.64031 2.86 35.35 3591 3591 MS2 16/18 Linfeng_20120130_CHD1_1.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 536 2.62 0.00 1 24 25 3 453.24814 1357.72986 -1.75 30.09 3440 3440 MS2 25/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 589 2.62 0.00 2 13 100 3 436.89093 1308.65824 3.01 17.53 1092 1092 MS2 16/36 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 323 2.61 0.00 0 9 25 2 554.27264 1107.53801 -4.46 22.06 2313 2313 MS2 15/16 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.60 0.00 0 7 25 2 554.27277 1107.53826 -4.24 21.96 2409 2409 MS2 14/16 Linfeng_091311_rIgG_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 326 2.59 0.00 0 28 25 2 554.27661 1107.54595 2.70 20.98 1536 1536 MS2 12/16 Linfeng_122411_rIgG_7.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 548 2.58 0.00 0 17 25 2 602.32355 1203.63982 2.46 29.87 2536 2536 MS2 16/18 Linfeng_122411_rIgG_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 439 2.58 0.00 0 11 100 2 554.27679 1107.54631 3.03 19.74 1344 1344 MS2 14/16 Linfeng_20120130_CHD1_5.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 329 2.58 0.00 0 56 25 2 554.27570 1107.54411 1.05 20.95 1774 1774 MS2 12/16 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.58 0.00 2 9 100 3 436.89099 1308.65842 3.15 17.65 1106 1106 MS2 17/36 Linfeng_20120130_CHD1_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.58 0.00 0 17 100 2 602.32361 1203.63994 2.56 35.73 4059 4059 MS2 15/18 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 341 2.57 0.00 0 19 25 2 704.35681 1407.70635 -3.66 41.01 4801 4801 MS2 17/22 Linfeng_091311_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 751 2.57 0.00 0 34 100 2 602.32428 1203.64128 3.67 36.52 4223 4223 MS2 16/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.57 0.00 0 12 100 2 602.32404 1203.64079 3.27 36.38 3427 3427 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.57 0.00 2 12 100 3 436.89081 1308.65787 2.73 17.92 1286 1286 MS2 17/36 Linfeng_20120130_CHD1_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 767 2.56 0.00 0 13 100 2 602.32446 1203.64165 3.98 36.12 4143 4143 MS2 16/18 Linfeng_20120130_CHD1_10.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 430 2.56 0.00 1 6 100 2 675.86902 1350.73076 3.21 24.80 2031 2031 MS2 12/22 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.55 0.00 0 18 100 2 602.32379 1203.64031 2.86 35.93 4102 4102 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 747 2.55 0.00 0 67 100 2 602.32428 1203.64128 3.67 35.89 3206 3206 MS2 13/18 Linfeng_20120130_CHD1_9.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 433 2.55 0.00 1 21 25 3 453.24808 1357.72968 -1.89 30.27 3451 3451 MS2 24/44 Linfeng_091311_rIgG_6.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 389 2.54 0.00 1 12 25 2 679.36774 1357.72820 -2.98 30.14 3179 3179 MS2 18/22 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.54 0.00 0 15 100 2 602.32379 1203.64031 2.86 35.17 3548 3548 MS2 15/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 766 2.54 0.00 0 12 100 2 602.32422 1203.64116 3.57 35.70 3849 3849 MS2 16/18 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High ADTLTDEINFLR Unambiguous 7 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.53 0.00 0 26 20 2 704.35791 1407.70854 -2.10 40.85 4632 4632 MS2 18/22 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 553 2.51 0.00 0 51 25 2 602.32269 1203.63811 1.04 30.46 2862 2862 MS2 17/18 Linfeng_122411_rIgG_2.raw High NKLEGLEDALQK Unambiguous 8 2 IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 539 2.51 0.00 1 24 25 3 453.24838 1357.73059 -1.21 28.40 2815 2815 MS2 24/44 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 685 2.51 0.00 0 26 100 2 602.32281 1203.63835 1.24 36.40 2943 2943 MS2 14/18 Linfeng_20120130_CHD1_7.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 756 2.50 0.00 0 13 100 2 602.32355 1203.63982 2.46 35.61 4030 4030 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 511 2.50 0.00 0 24 25 2 602.32312 1203.63896 1.75 30.85 3084 3084 MS2 16/18 Linfeng_122411_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 600 2.50 0.00 2 19 100 3 436.89096 1308.65833 3.08 17.18 1130 1130 MS2 17/36 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 765 2.50 0.00 0 14 100 2 602.32385 1203.64043 2.96 35.56 4019 4019 MS2 16/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.50 0.00 0 43 100 2 602.32404 1203.64079 3.27 36.06 3230 3230 MS2 11/18 Linfeng_20120130_CHD1_3.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 552 2.49 0.00 0 30 25 2 602.32269 1203.63811 1.04 30.49 2835 2835 MS2 16/18 Linfeng_122411_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 784 2.49 0.00 0 42 100 2 602.32404 1203.64079 3.27 36.14 3252 3252 MS2 14/18 Linfeng_20120130_CHD1_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.48 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.29 4084 4084 MS2 15/18 Linfeng_20120130_CHD1_8.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 757 2.47 0.00 0 58 100 2 602.32440 1203.64153 3.88 36.57 4233 4233 MS2 16/18 Linfeng_20120130_CHD1_10.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 742 2.46 0.00 0 46 100 2 602.32367 1203.64006 2.66 35.71 3280 3280 MS2 15/18 Linfeng_20120130_CHD1_2.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 328 2.46 0.00 0 79 25 2 554.27325 1107.53923 -3.36 20.62 1885 1885 MS2 14/16 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 474 2.46 0.00 0 13 25 2 602.32318 1203.63909 1.85 30.30 2748 2748 MS2 16/18 Linfeng_122411_rIgG_8.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.45 0.00 2 5 100 3 436.89117 1308.65897 3.57 18.20 1201 1201 MS2 17/36 Linfeng_20120130_CHD1_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 787 2.44 0.00 0 35 100 2 602.32404 1203.64079 3.27 35.35 3781 3781 MS2 16/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 772 2.43 0.00 0 17 100 2 602.32434 1203.64141 3.77 36.30 3810 3810 MS2 14/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.42 0.00 0 51 100 2 602.32404 1203.64079 3.27 36.11 3247 3247 MS2 15/18 Linfeng_20120130_CHD1_9.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 494 2.42 0.00 0 8 100 2 554.27698 1107.54668 3.37 19.64 1297 1297 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.40 0.00 0 33 100 2 611.82208 1222.63689 4.45 31.46 2783 2783 MS2 13/20 Linfeng_20120130_CHD1_1.raw High EYQELMNVK Unambiguous 11 3 IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 443 2.39 0.00 0 21 100 2 577.28339 1153.55950 3.18 27.07 2040 2040 MS2 10/16 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 785 2.39 0.00 0 15 100 2 602.32410 1203.64092 3.37 36.05 4128 4128 MS2 15/18 Linfeng_20120130_CHD1_10.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.38 0.00 0 12 25 2 602.31995 1203.63262 -3.53 32.09 3751 3751 MS2 16/18 Linfeng_091311_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 585 2.37 0.00 0 40 100 2 611.82159 1222.63591 3.65 31.65 2523 2523 MS2 12/20 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.37 0.00 0 50 100 2 602.32397 1203.64067 3.17 35.93 3331 3331 MS2 14/18 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.37 0.00 0 15 25 2 602.32031 1203.63335 -2.92 32.09 3702 3702 MS2 17/18 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 758 2.36 0.00 0 18 100 2 602.32404 1203.64079 3.27 36.26 3403 3403 MS2 15/18 Linfeng_20120130_CHD1_2.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 469 2.35 0.00 0 22 25 2 602.32324 1203.63921 1.95 29.87 2625 2625 MS2 15/18 Linfeng_122411_rIgG_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 770 2.34 0.00 0 36 100 2 602.32428 1203.64128 3.67 36.40 3289 3289 MS2 13/18 Linfeng_20120130_CHD1_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 563 2.33 0.00 2 5 100 2 654.83331 1308.65935 3.86 17.48 1151 1151 MS2 13/18 Linfeng_20120130_CHD1_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 535 2.33 0.00 0 23 25 2 602.31964 1203.63201 -4.03 32.09 3438 3438 MS2 17/18 Linfeng_091311_rIgG_1.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 762 2.33 0.00 0 49 100 2 602.32385 1203.64043 2.96 35.99 3344 3344 MS2 13/18 Linfeng_20120130_CHD1_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 603 2.32 0.00 0 13 100 2 611.81995 1222.63262 0.95 31.99 3217 3217 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 670 2.32 0.00 0 43 100 2 558.30286 1115.59844 3.67 34.19 3703 3703 MS2 15/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 597 2.32 0.00 0 15 25 2 602.32043 1203.63359 -2.72 32.32 3718 3718 MS2 15/18 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 789 2.30 0.00 0 33 100 2 602.32391 1203.64055 3.07 36.29 3270 3270 MS2 14/18 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 592 2.30 0.00 0 47 25 2 602.31989 1203.63249 -3.63 32.26 3695 3695 MS2 16/18 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 748 2.29 0.00 0 54 100 2 602.32416 1203.64104 3.47 36.08 3240 3240 MS2 15/18 Linfeng_20120130_CHD1_9.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High NmQDLVEDLK Unambiguous 5 1 IPI00956313.1 M2(Oxidation) CID 1.0000 0.0000 1 1 457 2.27 0.00 0 52 100 2 610.79749 1220.58769 4.01 30.31 2869 2869 MS2 13/18 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 25 25 2 602.32324 1203.63921 1.95 30.53 2984 2984 MS2 17/18 Linfeng_122411_rIgG_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 583 2.23 0.00 0 9 25 2 602.32025 1203.63323 -3.02 32.03 3705 3705 MS2 15/18 Linfeng_091311_rIgG_3.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 754 2.23 0.00 0 41 100 2 602.32361 1203.63994 2.56 36.60 3469 3469 MS2 13/18 Linfeng_20120130_CHD1_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 711 2.23 0.00 0 37 100 2 602.32526 1203.64324 5.30 36.50 3854 3854 MS2 12/18 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 573 2.21 0.00 0 8 8 2 602.32202 1203.63677 -0.08 3.72 365 365 MS2 16/18 Linfeng_122411_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 783 2.20 0.00 0 39 100 2 602.32397 1203.64067 3.17 35.75 3165 3165 MS2 13/18 Linfeng_20120130_CHD1_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High ISIGGGScAISGGYGSR Unambiguous 8 2 IPI00909059.5;IPI00956313.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 2.20 0.00 0 10 25 2 799.88184 1598.75640 -1.76 29.21 3257 3257 MS2 19/32 Linfeng_091311_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High NmQDLVEDLK Unambiguous 5 1 IPI00956313.1 M2(Oxidation) CID 1.0000 0.0000 1 1 429 2.18 0.00 0 52 100 2 610.79749 1220.58769 4.01 30.34 2874 2874 MS2 13/18 Linfeng_20120130_CHD1_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 778 2.17 0.00 0 36 100 2 602.32391 1203.64055 3.07 35.29 3770 3770 MS2 14/18 Linfeng_20120130_CHD1_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 593 2.16 0.00 0 29 100 2 611.82196 1222.63664 4.25 31.51 2793 2793 MS2 14/20 Linfeng_20120130_CHD1_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 522 2.15 0.00 0 29 25 2 602.32056 1203.63384 -2.51 32.41 3720 3720 MS2 15/18 Linfeng_091311_rIgG_7.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 530 2.14 0.00 2 0 100 2 654.83240 1308.65752 2.46 17.66 1131 1131 MS2 13/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.10 0.00 0 41 100 2 611.82184 1222.63640 4.05 31.33 2898 2898 MS2 13/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQYEEIAQR Unambiguous 11 3 IPI00021304.1;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 327 2.09 0.00 0 42 25 2 554.27655 1107.54582 2.59 20.97 1678 1678 MS2 12/16 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 774 2.08 0.00 0 62 100 2 602.32410 1203.64092 3.37 35.96 3219 3219 MS2 15/18 Linfeng_20120130_CHD1_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 771 2.07 0.00 0 45 100 2 602.32471 1203.64214 4.38 36.80 4069 4069 MS2 12/18 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High LEGLEDALQK Unambiguous 8 2 IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 627 2.05 0.00 0 75 100 2 558.30237 1115.59746 2.80 33.32 3334 3334 MS2 12/18 Linfeng_20120130_CHD1_4.raw High WTLLQEQGTK Unambiguous 10 3 IPI00009867.3;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 759 2.04 0.00 0 35 100 2 602.32336 1203.63945 2.15 35.53 3238 3238 MS2 11/18 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 579 2.02 0.00 0 44 100 2 611.82172 1222.63616 3.85 32.20 2610 2610 MS2 12/20 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High SGFSSISVSR Unambiguous 5 1 IPI00956313.1 CID 1.0000 0.0000 1 1 260 2.01 0.00 0 40 25 2 513.76239 1026.51750 -3.88 27.03 2757 2757 MS2 15/18 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00784985.1 IGK@ protein 42.98 6 1 6 23 61.40 22.98 3 16 0.00 23.04 20.00 3 7 235 25.5 6.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 504 4.52 0.00 0 5 100 2 938.46887 1875.93047 1.86 26.47 2178 2178 MS2 19/32 Linfeng_20120130_CHD1_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 444 3.71 0.00 0 14 100 2 816.90045 1632.79363 4.39 39.96 4795 4795 MS2 19/30 Linfeng_20120130_CHD1_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High FSGSGSGTDFTLTISR Unambiguous 2 1 IPI00784985.1 CID 1.0000 0.0000 1 1 445 3.50 0.00 0 10 100 2 816.89972 1632.79216 3.49 40.13 4873 4873 MS2 19/30 Linfeng_20120130_CHD1_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 554 3.11 0.00 0 14 100 2 751.88611 1502.76494 4.30 39.90 4781 4781 MS2 17/26 Linfeng_20120130_CHD1_8.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 593 3.08 0.00 0 16 100 2 751.88477 1502.76225 2.51 40.48 3905 3905 MS2 17/26 Linfeng_20120130_CHD1_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 551 2.59 0.00 0 23 100 2 751.88531 1502.76335 3.24 39.84 4769 4769 MS2 17/26 Linfeng_20120130_CHD1_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 544 2.53 0.00 0 10 100 3 625.98248 1875.93290 3.15 27.00 1901 1901 MS2 24/64 Linfeng_20120130_CHD1_9.raw IPI00883857.2 Isoform Long of Heterogeneous nuclear ribonucleoprotein U 42.67 5 30 30 128 167.05 35.03 23 47 115.22 26.18 16 29 175.98 18.42 11 52 825 90.5 6.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 6.43 0.00 1 1 25 4 1082.95276 4328.78921 3.46 46.12 4849 4849 MS2 46/210 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 305 6.42 0.00 0 9 25 3 908.78961 2724.35428 -0.51 43.15 5121 5121 MS2 36/84 Linfeng_091311_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 304 6.25 0.00 0 9 12 3 908.78857 2724.35117 -1.65 43.27 5133 5133 MS2 35/84 Linfeng_091311_rIgG_4.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 60 6.25 0.00 0 5 25 3 948.08813 2842.24985 3.43 50.13 5359 5359 MS2 41/92 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 302 6.20 0.00 0 3 9 3 908.78772 2724.34861 -2.59 43.11 5181 5181 MS2 36/84 Linfeng_091311_rIgG_2.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 147 6.17 0.00 0 0 25 3 1042.82056 3126.44712 2.45 31.37 2950 2950 MS2 40/124 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 321 6.00 0.00 0 2 7 3 908.79272 2724.36362 2.92 42.28 4352 4352 MS2 35/84 Linfeng_122411_rIgG_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 354 5.94 0.00 1 13 100 3 1042.82288 3126.45407 4.67 36.98 3403 3403 MS2 40/124 Linfeng_20120130_CHD1_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 349 5.93 0.00 1 12 100 3 1042.82227 3126.45224 4.09 36.90 3386 3386 MS2 33/124 Linfeng_20120130_CHD1_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 52 5.85 0.00 0 14 25 3 948.08496 2842.24033 0.08 51.20 6127 6127 MS2 41/92 Linfeng_091311_rIgG_4.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 339 5.83 0.00 0 2 25 3 908.79352 2724.36600 3.80 42.21 4465 4465 MS2 37/84 Linfeng_122411_rIgG_4.raw High LQAALDDEEAGGRPAmEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 M16(Oxidation) CID 1.0000 0.0000 1 1 330 5.73 0.00 1 0 100 3 1048.15479 3142.44980 4.91 32.75 2574 2574 MS2 35/124 Linfeng_20120130_CHD1_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 326 5.54 0.00 0 4 25 3 908.79248 2724.36289 2.65 42.49 4390 4390 MS2 37/84 Linfeng_122411_rIgG_2.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 5.36 0.00 0 31 25 3 948.08618 2842.24399 1.36 51.10 6190 6190 MS2 40/92 Linfeng_091311_rIgG_2.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 33 5.28 0.00 0 3 21 4 915.40479 3658.59731 -2.40 34.75 4056 4056 MS2 37/168 Linfeng_091311_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 53 5.23 0.00 0 32 25 3 948.08563 2842.24234 0.78 51.03 6101 6101 MS2 35/92 Linfeng_091311_rIgG_3.raw High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 4.94 0.00 1 1 25 3 1443.60046 4328.78684 2.91 46.17 4855 4855 MS2 32/140 Linfeng_122411_rIgG_3.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 61 4.81 0.00 0 15 25 3 948.08936 2842.25351 4.71 50.24 5454 5454 MS2 37/92 Linfeng_122411_rIgG_4.raw High NQSQGYNQWQQGQFWGQKPWSQHYHQGYY Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 33 4.67 0.00 0 1 11 4 915.40485 3658.59755 -2.33 34.89 4119 4119 MS2 38/168 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 469 4.64 0.00 0 9 25 3 549.95422 1647.84812 1.90 31.88 3015 3015 MS2 37/56 Linfeng_122411_rIgG_3.raw High SPQPPVEEEDEHFDDTVVcLDTYNcDLHFK Unambiguous 5 1 IPI00883857.2 C19(Carbamidomethyl); C25(Carbamidomethyl) CID 1.0000 0.0000 1 1 27 4.58 0.00 0 10 25 4 909.64355 3635.55239 -1.50 38.24 4503 4503 MS2 38/174 Linfeng_091311_rIgG_3.raw High LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 149 4.58 0.00 0 6 25 4 782.36731 3126.44741 2.54 31.39 2952 2952 MS2 48/186 Linfeng_122411_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 476 4.53 0.00 0 16 6 3 549.95209 1647.84171 -1.99 33.13 3847 3847 MS2 36/56 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 441 4.50 0.00 0 4 4 2 824.42792 1647.84856 2.17 31.97 3028 3028 MS2 25/28 Linfeng_122411_rIgG_3.raw High LSASSLTmESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 M8(Oxidation) CID 1.0000 0.0000 1 1 549 4.43 0.00 0 5 48 2 1023.99969 2046.99211 -1.63 55.13 7335 7335 MS2 20/36 Linfeng_20120130_CHD1_4.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 4.42 0.00 0 30 25 3 868.08527 2602.24125 1.15 51.26 6210 6210 MS2 34/84 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 4.38 0.00 0 18 25 3 868.08374 2602.23667 -0.61 51.37 6139 6139 MS2 35/84 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 663 4.37 0.00 0 15 100 2 824.42798 1647.84868 2.24 38.38 4355 4355 MS2 24/28 Linfeng_20120130_CHD1_4.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 4.35 0.00 0 31 25 3 868.08405 2602.23758 -0.26 51.74 6159 6159 MS2 29/84 Linfeng_091311_rIgG_5.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 594 4.26 0.00 0 50 100 2 824.42883 1647.85039 3.28 38.90 3779 3779 MS2 25/28 Linfeng_20120130_CHD1_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 586 4.25 0.00 0 28 100 2 824.42944 1647.85161 4.02 38.71 3744 3744 MS2 23/28 Linfeng_20120130_CHD1_3.raw High NQSQGYNQWQQGQFWGQK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 235 4.22 0.00 0 0 100 2 1106.50452 2212.00176 2.81 40.07 3997 3997 MS2 20/34 Linfeng_20120130_CHD1_3.raw High KAEGGGGGGRPGAPAAGDGKTEQK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 338 4.20 0.00 2 15 25 4 539.02234 2153.06753 -0.93 12.20 1004 1004 MS2 45/138 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 594 4.14 0.00 0 15 100 2 824.42889 1647.85051 3.36 38.32 4347 4347 MS2 24/28 Linfeng_20120130_CHD1_4.raw High RNFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 429 4.14 0.00 1 4 25 3 601.98773 1803.94864 1.41 28.21 2534 2534 MS2 28/60 Linfeng_122411_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 646 4.13 0.00 0 25 100 3 549.95520 1647.85105 3.68 37.79 3564 3564 MS2 29/56 Linfeng_20120130_CHD1_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 455 4.11 0.00 0 13 15 2 824.42365 1647.84001 -3.01 33.10 3886 3886 MS2 25/28 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 4.09 0.00 0 3 25 3 868.08765 2602.24839 3.89 50.17 5364 5364 MS2 33/84 Linfeng_122411_rIgG_3.raw High TcNcETEDYGEKFDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl); C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 8 4.08 0.00 1 13 25 4 1082.95068 4328.78090 1.54 46.88 5588 5588 MS2 39/210 Linfeng_091311_rIgG_3.raw High KDcEVVmMIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl); M7(Oxidation) CID 1.0000 0.0000 1 1 546 4.01 0.00 1 8 100 2 860.92822 1720.84917 3.48 41.89 4293 4293 MS2 17/30 Linfeng_20120130_CHD1_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 624 4.01 0.00 0 22 100 2 824.42926 1647.85124 3.80 37.95 4276 4276 MS2 24/28 Linfeng_20120130_CHD1_4.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 458 3.99 0.00 0 8 5 3 549.95142 1647.83969 -3.21 33.19 3897 3897 MS2 37/56 Linfeng_091311_rIgG_2.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 450 3.96 0.00 0 5 6 2 824.42438 1647.84148 -2.13 33.12 3846 3846 MS2 25/28 Linfeng_091311_rIgG_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 572 3.96 0.00 0 36 100 2 824.42896 1647.85063 3.43 37.67 3538 3538 MS2 25/28 Linfeng_20120130_CHD1_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 231 3.88 0.00 0 5 100 2 646.29865 1291.59001 4.55 40.79 4118 4118 MS2 15/18 Linfeng_20120130_CHD1_3.raw High NFILDQTNVSAAAQR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 664 3.80 0.00 0 19 100 3 549.95532 1647.85141 3.90 38.37 3679 3679 MS2 30/56 Linfeng_20120130_CHD1_3.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 357 3.79 0.00 0 26 25 3 677.67230 2031.00235 0.90 51.80 6276 6276 MS2 27/72 Linfeng_091311_rIgG_2.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 379 3.58 0.00 0 29 25 3 677.67444 2031.00876 4.05 50.54 5410 5410 MS2 29/72 Linfeng_122411_rIgG_3.raw High EKPYFPIPEEYTFIQNVPLEDR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 332 3.57 0.00 0 6 25 4 681.84589 2724.36172 2.22 42.32 4357 4357 MS2 36/126 Linfeng_122411_rIgG_3.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 279 3.56 0.00 1 9 100 2 849.39716 1697.78703 3.78 42.52 4397 4397 MS2 16/24 Linfeng_20120130_CHD1_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 533 3.54 0.00 0 1 100 2 699.85303 1398.69878 3.85 35.67 3148 3148 MS2 19/22 Linfeng_20120130_CHD1_3.raw High KDcEVVmMIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl); M7(Oxidation) CID 1.0000 0.0000 1 1 518 3.50 0.00 1 11 100 2 860.92761 1720.84795 2.77 40.33 4043 4043 MS2 19/30 Linfeng_20120130_CHD1_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 198 3.50 0.00 1 10 25 4 797.63727 3187.52724 4.12 47.58 5142 5142 MS2 40/156 Linfeng_122411_rIgG_4.raw High DcEVVmmIGLPGAGK Unambiguous 4 1 IPI00883857.2 C2(Carbamidomethyl); M6(Oxidation); M7(Oxidation) CID 1.0000 0.0000 1 1 325 3.48 0.00 0 12 100 2 804.87830 1608.74932 3.85 36.45 3300 3300 MS2 22/28 Linfeng_20120130_CHD1_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 542 3.48 0.00 0 0 100 2 699.85345 1398.69963 4.46 34.62 2943 2943 MS2 18/22 Linfeng_20120130_CHD1_3.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 121 3.48 0.00 1 6 25 2 849.39563 1697.78398 1.99 31.48 2964 2964 MS2 20/24 Linfeng_122411_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 463 3.48 0.00 0 16 10 3 572.30707 1714.90665 -3.32 38.06 4534 4534 MS2 27/68 Linfeng_091311_rIgG_2.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 235 3.46 0.00 0 37 25 3 868.08569 2602.24253 1.64 51.36 6147 6147 MS2 28/84 Linfeng_091311_rIgG_4.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 367 3.46 0.00 0 16 25 3 677.67200 2031.00144 0.45 51.79 6185 6185 MS2 28/72 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 222 3.46 0.00 0 1 87 2 646.29767 1291.58806 3.03 41.31 4208 4208 MS2 15/18 Linfeng_20120130_CHD1_3.raw High KDcEVVmmIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl); M7(Oxidation); M8(Oxidation) CID 1.0000 0.0000 1 1 492 3.43 0.00 1 25 100 3 579.62024 1736.84616 4.65 32.74 2572 2572 MS2 26/60 Linfeng_20120130_CHD1_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 172 3.43 0.00 1 20 25 4 797.63525 3187.51919 1.59 48.69 5816 5816 MS2 38/156 Linfeng_091311_rIgG_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 481 3.42 0.00 0 48 100 2 699.85242 1398.69756 2.97 36.31 3275 3275 MS2 18/22 Linfeng_20120130_CHD1_3.raw High LSASSLTMESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 359 3.42 0.00 0 26 25 3 677.67212 2031.00180 0.63 51.90 6199 6199 MS2 29/72 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 236 3.37 0.00 0 6 100 2 646.29822 1291.58916 3.88 41.60 4250 4250 MS2 15/18 Linfeng_20120130_CHD1_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 473 3.29 0.00 0 47 100 2 699.85242 1398.69756 2.97 36.17 3248 3248 MS2 16/22 Linfeng_20120130_CHD1_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 241 3.27 0.00 0 29 100 2 646.29822 1291.58916 3.88 40.75 4829 4829 MS2 15/18 Linfeng_20120130_CHD1_4.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 194 3.25 0.00 1 8 25 4 797.63708 3187.52651 3.89 47.79 5063 5063 MS2 43/156 Linfeng_122411_rIgG_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 535 3.24 0.00 0 19 100 2 699.85211 1398.69695 2.54 34.89 3933 3933 MS2 15/22 Linfeng_20120130_CHD1_5.raw High KDcEVVMmIGLPGAGK Unambiguous 4 1 IPI00883857.2 C3(Carbamidomethyl); M8(Oxidation) CID 1.0000 0.0000 1 1 578 3.24 0.00 1 27 100 3 574.28815 1720.84989 3.90 40.21 4022 4022 MS2 23/60 Linfeng_20120130_CHD1_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 555 3.23 0.00 0 33 100 2 699.85315 1398.69902 4.02 34.94 3695 3695 MS2 16/22 Linfeng_20120130_CHD1_4.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 98 3.18 0.00 1 0 25 2 849.39069 1697.77410 -3.84 32.38 3749 3749 MS2 20/24 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 244 3.14 0.00 0 9 100 2 646.29919 1291.59111 5.40 41.72 4269 4269 MS2 15/18 Linfeng_20120130_CHD1_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 3.11 0.00 1 22 25 4 797.63409 3187.51455 0.13 48.72 5891 5891 MS2 43/156 Linfeng_091311_rIgG_2.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 520 3.09 0.00 0 22 100 2 691.85620 1382.70513 4.81 41.99 5068 5068 MS2 18/22 Linfeng_20120130_CHD1_4.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 248 3.08 0.00 0 28 100 2 646.29810 1291.58891 3.70 41.25 4931 4931 MS2 15/18 Linfeng_20120130_CHD1_4.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 512 3.02 0.00 0 26 100 2 699.85236 1398.69744 2.89 35.11 2764 2764 MS2 17/22 Linfeng_20120130_CHD1_6.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 337 3.01 0.00 0 12 25 2 691.85266 1382.69805 -0.32 33.80 3264 3264 MS2 19/22 Linfeng_122411_rIgG_3.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 508 3.00 0.00 0 20 100 2 691.85645 1382.70561 5.16 41.71 4266 4266 MS2 18/22 Linfeng_20120130_CHD1_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 151 2.99 0.00 0 4 25 2 646.29657 1291.58586 1.33 32.87 3145 3145 MS2 15/18 Linfeng_122411_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 456 2.94 0.00 0 4 22 3 572.30701 1714.90647 -3.43 38.05 4479 4479 MS2 26/68 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 224 2.94 0.00 0 36 100 2 646.29730 1291.58733 2.47 40.46 4061 4061 MS2 15/18 Linfeng_20120130_CHD1_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 502 2.92 0.00 0 26 100 2 699.85162 1398.69597 1.84 35.54 2840 2840 MS2 14/22 Linfeng_20120130_CHD1_6.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 431 2.90 0.00 0 5 25 3 572.30975 1714.91471 1.37 36.86 3652 3652 MS2 31/68 Linfeng_122411_rIgG_3.raw High GNFTLPEVAEcFDEITYVELQKEEAQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.90 0.00 1 0 25 3 1063.17981 3187.52488 3.37 47.51 5133 5133 MS2 27/104 Linfeng_122411_rIgG_4.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 99 2.88 0.00 1 20 25 2 849.38953 1697.77178 -5.20 32.47 3802 3802 MS2 17/24 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 484 2.84 0.00 0 34 100 2 857.96399 1714.92070 4.87 46.97 6162 6162 MS2 17/34 Linfeng_20120130_CHD1_4.raw Medium EKPYFPIPEEYTFIQNVPLEDRVR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 276 2.82 0.00 1 1 24 4 745.63959 2979.53652 3.80 40.66 4143 4143 MS2 43/138 Linfeng_122411_rIgG_3.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.80 0.00 0 4 25 2 753.27777 1505.54827 -2.45 17.41 1718 1718 MS2 19/22 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 369 2.77 0.00 0 29 21 2 857.95630 1714.90532 -4.10 38.00 4526 4526 MS2 23/34 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 364 2.77 0.00 0 3 21 2 857.96130 1714.91533 1.74 36.85 3651 3651 MS2 22/34 Linfeng_122411_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 384 2.74 0.00 0 17 13 2 857.95697 1714.90666 -3.32 38.01 4474 4474 MS2 21/34 Linfeng_091311_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 122 2.72 0.00 0 26 25 2 646.29370 1291.58013 -3.11 33.76 3929 3929 MS2 15/18 Linfeng_091311_rIgG_3.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 389 2.71 0.00 0 13 25 2 857.96063 1714.91399 0.95 36.99 3694 3694 MS2 21/34 Linfeng_122411_rIgG_2.raw High KAEGGGGGGRPGAPAAGDGK Unambiguous 2 1 IPI00883857.2 CID 1.0000 0.0000 1 1 330 2.70 0.00 1 32 25 3 556.28009 1666.82572 0.01 11.97 981 981 MS2 32/76 Linfeng_091311_rIgG_2.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 509 2.70 0.00 0 18 100 2 699.85120 1398.69512 1.23 35.59 2849 2849 MS2 15/22 Linfeng_20120130_CHD1_6.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 548 2.70 0.00 0 39 100 3 572.31122 1714.91910 3.94 46.95 5340 5340 MS2 24/68 Linfeng_20120130_CHD1_3.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.70 0.00 0 2 25 2 753.27856 1505.54985 -1.39 17.27 1673 1673 MS2 17/22 Linfeng_091311_rIgG_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 512 2.70 0.00 0 15 100 2 699.85266 1398.69805 3.32 35.06 3139 3139 MS2 15/22 Linfeng_20120130_CHD1_2.raw High TcNcETEDYGEK Unambiguous 5 1 IPI00883857.2 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 4 2.68 0.00 0 10 25 2 753.27844 1505.54961 -1.56 17.36 1674 1674 MS2 19/22 Linfeng_091311_rIgG_4.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 247 2.65 0.00 0 30 100 2 646.29803 1291.58879 3.60 41.90 4294 4294 MS2 13/18 Linfeng_20120130_CHD1_3.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 554 2.63 0.00 0 30 100 2 691.85590 1382.70452 4.36 41.92 5055 5055 MS2 18/22 Linfeng_20120130_CHD1_4.raw High GNFTLPEVAEcFDEITYVELQK Unambiguous 4 1 IPI00883857.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 245 2.59 0.00 0 0 25 3 868.08746 2602.24784 3.68 50.09 5437 5437 MS2 25/84 Linfeng_122411_rIgG_4.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 541 2.56 0.00 0 23 100 2 699.85297 1398.69866 3.76 34.98 3504 3504 MS2 17/22 Linfeng_20120130_CHD1_1.raw High FDENDVITcFANFESDEVELSYAK Unambiguous 5 1 IPI00883857.2 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 56 2.56 0.00 0 0 25 2 1421.63123 2842.25517 5.30 50.26 5376 5376 MS2 15/46 Linfeng_122411_rIgG_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 257 2.55 0.00 0 0 100 2 646.29797 1291.58867 3.51 41.52 4978 4978 MS2 11/18 Linfeng_20120130_CHD1_4.raw High VSELKEELKK Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 312 2.54 0.00 2 21 25 2 601.85144 1202.69560 -2.94 18.01 1803 1803 MS2 15/18 Linfeng_091311_rIgG_2.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 535 2.52 0.00 0 45 100 3 572.31152 1714.92002 4.47 46.91 5331 5331 MS2 22/68 Linfeng_20120130_CHD1_3.raw High LSASSLTmESFAFLWAGGR Unambiguous 5 1 IPI00883857.2 M8(Oxidation) CID 1.0000 0.0000 1 1 572 2.50 0.00 0 0 100 2 1024.00159 2046.99590 0.22 55.18 6471 6471 MS2 12/36 Linfeng_20120130_CHD1_3.raw High GYFEYIEENK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 258 2.48 0.00 0 31 100 2 646.29846 1291.58965 4.26 41.02 4427 4427 MS2 15/18 Linfeng_20120130_CHD1_2.raw High YNILGTNTIMDK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 458 2.44 0.00 0 33 100 2 691.85504 1382.70281 3.13 41.60 4251 4251 MS2 16/22 Linfeng_20120130_CHD1_3.raw High VSELKEELK Unambiguous 3 1 IPI00883857.2 CID 1.0000 0.0000 1 1 453 2.43 0.00 1 15 25 2 537.80420 1074.60112 -2.84 20.68 2179 2179 MS2 14/16 Linfeng_091311_rIgG_2.raw High DIDIHEVR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 270 2.42 0.00 0 41 25 2 498.75729 996.50731 -3.63 24.28 2685 2685 MS2 13/14 Linfeng_091311_rIgG_2.raw High McLFAGFQR Unambiguous 4 1 IPI00883857.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 136 2.38 0.00 0 15 14 2 565.26843 1129.52959 1.23 36.85 3650 3650 MS2 15/16 Linfeng_122411_rIgG_3.raw High LLEQYKEESK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 334 2.36 0.00 1 15 25 2 633.83087 1266.65447 -2.51 20.77 2192 2192 MS2 14/18 Linfeng_091311_rIgG_2.raw High mcLFAGFQR Unambiguous 4 1 IPI00883857.2 M1(Oxidation); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 211 2.32 0.00 0 0 100 2 573.26660 1145.52593 2.46 41.08 4168 4168 MS2 13/16 Linfeng_20120130_CHD1_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 468 2.30 0.00 0 25 25 2 524.77600 1048.54473 2.37 25.46 2313 2313 MS2 14/18 Linfeng_122411_rIgG_4.raw High SSGPTSLFAVTVAPPGAR Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 474 2.27 0.00 0 5 100 2 857.96210 1714.91692 2.66 47.60 5493 5493 MS2 14/34 Linfeng_20120130_CHD1_3.raw High McLFAGFQR Unambiguous 4 1 IPI00883857.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 121 2.24 0.00 0 15 25 2 565.26599 1129.52471 -3.09 37.92 4463 4463 MS2 15/16 Linfeng_091311_rIgG_3.raw High YNILGTNTImDK Unambiguous 4 1 IPI00883857.2 M10(Oxidation) CID 1.0000 0.0000 1 1 515 2.24 0.00 0 13 100 2 699.85193 1398.69658 2.28 35.57 3248 3248 MS2 14/22 Linfeng_20120130_CHD1_2.raw High KAVVVcPK Unambiguous 4 1 IPI00883857.2 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 540 2.23 0.00 1 17 25 2 450.76941 900.53154 -2.27 14.68 1334 1334 MS2 12/14 Linfeng_091311_rIgG_2.raw High LLEQYKEESK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 338 2.23 0.00 1 13 25 2 633.83118 1266.65508 -2.03 20.79 2168 2168 MS2 14/18 Linfeng_091311_rIgG_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 387 2.20 0.00 0 19 17 2 524.77277 1048.53826 -3.80 28.10 3215 3215 MS2 14/18 Linfeng_091311_rIgG_2.raw High LLEQYKEESKK Unambiguous 4 1 IPI00883857.2 CID 1.0000 0.0000 1 1 321 2.14 0.00 2 8 25 2 697.87836 1394.74944 -2.28 18.64 1893 1893 MS2 15/20 Linfeng_091311_rIgG_2.raw High GYFEYIEENKYSR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 279 2.10 0.00 1 0 100 2 849.39722 1697.78716 3.86 41.97 4307 4307 MS2 12/24 Linfeng_20120130_CHD1_3.raw High DIDIHEVR Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 266 2.10 0.00 0 8 25 2 498.75769 996.50810 -2.84 24.26 2648 2648 MS2 13/14 Linfeng_091311_rIgG_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 335 2.04 0.00 0 71 25 2 524.77307 1048.53887 -3.22 28.04 3169 3169 MS2 14/18 Linfeng_091311_rIgG_3.raw High NGQDLGVAFK Unambiguous 5 1 IPI00883857.2 CID 1.0000 0.0000 1 1 401 2.01 0.00 0 16 25 2 524.77344 1048.53960 -2.52 28.19 3183 3183 MS2 14/18 Linfeng_091311_rIgG_4.raw IPI00027834.3 Heterogeneous nuclear ribonucleoprotein L 42.61 5 15 15 37 57.67 34.47 12 17 44.21 23.94 9 12 35.06 11.21 3 8 589 64.1 8.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QALVEFEDVLGAcNAVNYAADNQIYIAGHPAFVNYSTSQK Unambiguous 3 1 IPI00027834.3 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 100 7.09 0.00 0 3 25 4 1097.77820 4388.09096 -0.46 45.97 5470 5470 MS2 62/234 Linfeng_091311_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 132 6.32 0.00 1 9 100 3 964.09430 2890.26834 2.06 30.40 2842 2842 MS2 34/100 Linfeng_20120130_CHD1_5.raw High LNVFKNDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 110 6.21 0.00 2 2 25 4 873.66400 3491.63418 3.72 31.81 3152 3152 MS2 45/180 Linfeng_122411_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 133 5.93 0.00 1 6 100 3 964.09454 2890.26908 2.31 30.49 2862 2862 MS2 35/100 Linfeng_20120130_CHD1_5.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 65 5.61 0.00 1 0 25 3 964.09583 2890.27292 3.64 27.69 2609 2609 MS2 35/100 Linfeng_122411_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 133 5.34 0.00 1 4 100 3 964.09460 2890.26926 2.38 30.32 2823 2823 MS2 34/100 Linfeng_20120130_CHD1_5.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 11 5.32 0.00 0 1 22 4 746.05591 2981.20180 -0.30 16.39 1538 1538 MS2 53/204 Linfeng_091311_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 56 5.29 0.00 1 0 25 3 964.09106 2890.25864 -1.30 28.96 3288 3288 MS2 34/100 Linfeng_091311_rIgG_4.raw High GLIDGVVEADLVEALQEFGPISYVVVMPK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 280 5.15 0.00 0 24 100 3 1029.88477 3087.63974 2.37 55.51 5928 5928 MS2 34/112 Linfeng_20120130_CHD1_6.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 13 4.96 0.00 0 0 25 4 746.05652 2981.20424 0.51 16.56 1526 1526 MS2 42/204 Linfeng_091311_rIgG_5.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 143 4.67 0.00 1 0 100 3 964.09570 2890.27256 3.52 30.64 2757 2757 MS2 29/100 Linfeng_20120130_CHD1_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 4.10 0.00 0 6 25 3 530.26715 1588.78690 2.53 41.90 4426 4426 MS2 28/48 Linfeng_122411_rIgG_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 4.08 0.00 0 5 25 2 794.89777 1588.78826 3.38 41.89 4425 4425 MS2 21/24 Linfeng_122411_rIgG_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 4.00 0.00 0 1 25 2 865.39551 1729.78374 -2.72 30.30 3468 3468 MS2 20/30 Linfeng_091311_rIgG_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 3.87 0.00 0 8 17 2 794.89398 1588.78069 -1.38 43.19 5122 5122 MS2 21/24 Linfeng_091311_rIgG_4.raw High TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 14 3.64 0.00 0 16 25 4 746.05902 2981.21425 3.87 15.36 1254 1254 MS2 44/204 Linfeng_122411_rIgG_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 3.58 0.00 0 2 25 2 865.39862 1729.78996 0.88 28.93 2775 2775 MS2 22/30 Linfeng_122411_rIgG_4.raw High NDQDTWDYTNPNLSGQGDPGSNPNKR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 65 3.53 0.00 1 13 25 4 723.32336 2890.27163 3.20 27.78 2621 2621 MS2 40/150 Linfeng_122411_rIgG_4.raw High VFNVFcLYGNVEK Unambiguous 3 1 IPI00027834.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 3.20 0.00 0 3 25 3 530.26471 1588.77958 -2.08 43.24 5129 5129 MS2 25/48 Linfeng_091311_rIgG_4.raw High AITHLNNNFMFGQK Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 384 3.19 0.00 0 9 25 3 545.60931 1634.81339 1.56 30.26 2949 2949 MS2 24/52 Linfeng_122411_rIgG_4.raw High TPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 341 3.09 0.00 0 21 25 3 359.54318 1076.61499 -5.72 22.00 2327 2327 MS2 22/36 Linfeng_091311_rIgG_4.raw High ASLNGADIYSGccTLK Unambiguous 3 1 IPI00027834.3 C12(Carbamidomethyl); C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 156 3.08 0.00 0 34 25 3 577.26770 1729.78855 0.06 28.99 2783 2783 MS2 30/60 Linfeng_122411_rIgG_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 565 2.81 0.00 0 50 100 2 611.80359 1222.59990 3.96 37.86 4258 4258 MS2 13/20 Linfeng_20120130_CHD1_4.raw High TPASPVVHIR Unambiguous 1 1 IPI00027834.3 CID 1.0000 0.0000 1 1 285 2.81 0.00 0 51 25 3 359.54425 1076.61820 -2.74 22.20 2313 2313 MS2 19/36 Linfeng_091311_rIgG_5.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 533 2.63 0.00 0 54 100 2 611.80286 1222.59844 2.76 37.74 4232 4232 MS2 13/20 Linfeng_20120130_CHD1_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 321 2.56 0.00 0 35 25 2 611.80237 1222.59746 1.96 31.52 3115 3115 MS2 16/20 Linfeng_122411_rIgG_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 265 2.53 0.00 0 33 25 2 611.79926 1222.59123 -3.13 32.90 3810 3810 MS2 16/20 Linfeng_091311_rIgG_4.raw High LcFSTAQHAS Unambiguous 2 1 IPI00027834.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 141 2.51 0.00 0 8 3 2 561.25519 1121.50310 -1.21 4.01 447 447 MS2 16/18 Linfeng_122411_rIgG_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 273 2.49 0.00 0 27 25 2 611.79938 1222.59148 -2.93 33.20 3823 3823 MS2 16/20 Linfeng_091311_rIgG_7.raw High LcFSTAQHAS Unambiguous 2 1 IPI00027834.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 144 2.34 0.00 0 29 25 2 561.25378 1121.50029 -3.71 24.23 2638 2638 MS2 16/18 Linfeng_091311_rIgG_4.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 319 2.23 0.00 0 4 24 2 632.32019 1263.63310 -2.96 27.90 3143 3143 MS2 15/20 Linfeng_091311_rIgG_4.raw High SSSGLLEWESK Unambiguous 4 1 IPI00027834.3 CID 1.0000 0.0000 1 1 562 2.20 0.00 0 48 100 2 611.80347 1222.59966 3.76 37.93 4273 4273 MS2 14/20 Linfeng_20120130_CHD1_4.raw High ISRPGDSDDSR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 143 2.17 0.00 0 28 25 2 602.78119 1204.55510 -0.19 13.96 1195 1195 MS2 14/20 Linfeng_091311_rIgG_4.raw High MAAAGGGGGGGR Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 122 2.14 0.00 0 17 25 2 459.71408 918.42088 -0.25 2.31 192 192 MS2 15/22 Linfeng_091311_rIgG_4.raw High IEYAKPTR Unambiguous 3 1 IPI00027834.3 CID 1.0000 0.0000 1 1 393 2.14 0.00 0 62 25 2 489.27243 977.53758 -4.00 16.53 1558 1558 MS2 12/14 Linfeng_091311_rIgG_4.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 367 2.12 0.00 0 33 25 2 632.32306 1263.63884 1.58 25.10 2264 2264 MS2 13/20 Linfeng_122411_rIgG_4.raw High NPNGPYPYTLK Unambiguous 2 1 IPI00027834.3 CID 1.0000 0.0000 1 1 341 2.00 0.00 0 39 25 2 632.32025 1263.63323 -2.86 28.23 3157 3157 MS2 12/20 Linfeng_091311_rIgG_7.raw IPI00927500.1 Isoform 3 of Transformer-2 protein homolog beta 42.55 4 6 6 10 15.62 29.26 4 5 20.07 31.91 4 5 188 21.9 10.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YGPIADVSIVYDQQSR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 295 4.70 0.00 0 19 25 2 905.95190 1810.89653 -0.29 35.62 3687 3687 MS2 21/30 Linfeng_122411_rIgG_6.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 4.34 0.00 0 5 25 3 795.37463 2384.10935 3.49 43.05 4617 4617 MS2 35/80 Linfeng_122411_rIgG_6.raw High YGPIADVSIVYDQQSR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 339 4.27 0.00 0 25 25 3 604.30365 1810.89640 -0.37 35.63 3688 3688 MS2 32/60 Linfeng_122411_rIgG_6.raw High GFAFVYFENVDDAK Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 175 3.89 0.00 0 30 25 2 811.38330 1621.75932 3.67 41.42 4410 4410 MS2 21/26 Linfeng_122411_rIgG_6.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 3.69 0.00 0 27 25 3 795.36987 2384.09507 -2.51 44.22 5223 5223 MS2 30/80 Linfeng_091311_rIgG_6.raw High GFAFVYFENVDDAK Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 160 3.54 0.00 0 23 25 2 811.37939 1621.75151 -1.15 42.56 5009 5009 MS2 20/26 Linfeng_091311_rIgG_7.raw High ANPDPNccLGVFGLSLYTTER Unambiguous 4 1 IPI00927500.1 C7(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 169 3.20 0.00 0 21 25 3 795.37067 2384.09745 -1.51 44.27 5224 5224 MS2 24/80 Linfeng_091311_rIgG_7.raw High IRVDFSITK Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 247 2.88 0.00 1 5 25 3 360.21381 1078.62687 1.20 29.08 2852 2852 MS2 23/32 Linfeng_122411_rIgG_6.raw High AAQDRDQIYR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 317 2.64 0.00 1 33 25 3 412.54150 1235.60996 -2.28 17.51 1715 1715 MS2 14/36 Linfeng_091311_rIgG_6.raw High GYDDRDYYSR Unambiguous 4 1 IPI00927500.1 CID 1.0000 0.0000 1 1 41 2.56 0.00 1 16 25 3 437.18509 1309.54071 -2.81 21.51 2266 2266 MS2 14/36 Linfeng_091311_rIgG_6.raw IPI00942498.1 Histone H3 (Fragment) 41.12 1 2 3 3 11.67 41.12 3 3 0.00 0.00 107 12.1 10.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQSAAIGALQEASEAYLVNLFEDTNLcAIHAK Unambiguous 1 1 IPI00942498.1 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 247 4.71 0.00 0 32 25 4 874.43774 3494.72915 0.84 54.46 6615 6615 MS2 39/186 Linfeng_091311_rIgG_10.raw High FQSAAIGALQEASEAYLVNLFEDTNLcAIHAKR Unambiguous 1 1 IPI00942498.1 C27(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 4.49 0.00 1 21 25 4 913.46405 3650.83437 1.93 52.71 6433 6433 MS2 41/192 Linfeng_091311_rIgG_10.raw High EIAQDFKTDLR Unambiguous 7 3 IPI00171611.7;IPI00219038.9;IPI00942498.1 CID 1.0000 0.0000 1 1 383 2.47 0.00 1 35 25 2 668.34705 1335.68682 -2.66 29.69 3490 3490 MS2 18/20 Linfeng_091311_rIgG_10.raw IPI00878392.1 11 kDa protein 41.05 2 3 3 7 19.83 41.05 3 7 95 11.2 6.80 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YFQINQDEEEEEDED Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 6 3.58 0.00 0 0 100 2 966.37024 1931.73320 1.56 31.76 3166 3166 MS2 19/28 Linfeng_20120130_CHD1_10.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 529 3.21 0.00 0 23 100 2 621.84583 1242.68437 3.40 28.67 2602 2602 MS2 16/24 Linfeng_20120130_CHD1_10.raw High ITVTSEVPFSK Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 501 2.88 0.00 0 8 100 2 604.33392 1207.66057 3.01 34.36 3741 3741 MS2 16/20 Linfeng_20120130_CHD1_10.raw High ITVTSEVPFSK Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 486 2.83 0.00 0 27 100 2 604.33386 1207.66045 2.91 34.80 2999 2999 MS2 15/20 Linfeng_20120130_CHD1_9.raw High ITVTSEVPFSK Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 505 2.61 0.00 0 21 100 2 604.33337 1207.65947 2.10 34.73 2987 2987 MS2 14/20 Linfeng_20120130_CHD1_9.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 523 2.55 0.00 0 39 100 2 621.84576 1242.68425 3.30 27.66 2438 2438 MS2 16/24 Linfeng_20120130_CHD1_10.raw High AGNLGGGVVTIER Unambiguous 2 1 IPI00878392.1 CID 1.0000 0.0000 1 1 524 2.18 0.00 0 45 100 2 621.84570 1242.68413 3.20 27.54 2418 2418 MS2 16/24 Linfeng_20120130_CHD1_10.raw IPI00550731.2 Putative uncharacterized protein 41.00 5 1 6 34 66.71 28.03 4 18 30.06 19.67 3 9 21.43 18.41 3 7 239 26.2 8.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 504 4.52 0.00 0 5 100 2 938.46887 1875.93047 1.86 26.47 2178 2178 MS2 19/32 Linfeng_20120130_CHD1_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 372 4.03 0.00 0 6 25 3 599.97125 1797.89920 2.17 44.10 4505 4505 MS2 31/60 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 395 3.86 0.00 0 11 25 3 649.34839 1946.03061 1.83 40.20 4016 4016 MS2 31/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 12 25 3 649.34894 1946.03226 2.68 41.22 4143 4143 MS2 26/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 375 3.36 0.00 0 16 25 3 649.34900 1946.03244 2.77 40.13 3683 3683 MS2 28/68 Linfeng_122411_rIgG_7.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 348 3.36 0.00 0 6 25 2 973.51831 1946.02934 1.18 40.22 4019 4019 MS2 24/34 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 397 3.31 0.00 0 21 25 3 649.34851 1946.03098 2.02 40.11 3838 3838 MS2 29/68 Linfeng_122411_rIgG_9.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 554 3.11 0.00 0 14 100 2 751.88611 1502.76494 4.30 39.90 4781 4781 MS2 17/26 Linfeng_20120130_CHD1_8.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 593 3.08 0.00 0 16 100 2 751.88477 1502.76225 2.51 40.48 3905 3905 MS2 17/26 Linfeng_20120130_CHD1_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 218 2.90 0.00 0 38 25 2 652.31372 1303.62016 2.79 24.21 1965 1965 MS2 18/24 Linfeng_122411_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 2.88 0.00 0 18 25 2 899.45111 1797.89495 -0.19 44.33 4534 4534 MS2 17/30 Linfeng_122411_rIgG_8.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 361 2.82 0.00 0 29 100 2 652.31354 1303.61980 2.51 29.72 2699 2699 MS2 19/24 Linfeng_20120130_CHD1_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 373 2.79 0.00 0 31 25 3 599.97186 1797.90104 3.19 44.20 4358 4358 MS2 21/60 Linfeng_122411_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 365 2.78 0.00 0 8 100 2 652.31378 1303.62029 2.88 29.06 2581 2581 MS2 14/24 Linfeng_20120130_CHD1_8.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 200 2.67 0.00 0 8 25 2 652.31049 1303.61370 -2.18 29.18 3420 3420 MS2 18/24 Linfeng_091311_rIgG_10.raw High FSGSGSGTDFTLK Unambiguous 1 1 IPI00550731.2 CID 1.0000 0.0000 1 1 203 2.64 0.00 0 20 25 2 652.31012 1303.61296 -2.74 29.36 3310 3310 MS2 16/24 Linfeng_091311_rIgG_9.raw High DSTYSLSSTLTLSK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 CID 1.0000 0.0000 1 1 551 2.59 0.00 0 23 100 2 751.88531 1502.76335 3.24 39.84 4769 4769 MS2 17/26 Linfeng_20120130_CHD1_8.raw High VYAcEVTHQGLSSPVTK Unambiguous 3 2 IPI00550731.2;IPI00784985.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 544 2.53 0.00 0 10 100 3 625.98248 1875.93290 3.15 27.00 1901 1901 MS2 24/64 Linfeng_20120130_CHD1_9.raw IPI00026167.5 NHP2-like protein 1 40.63 2 6 6 12 0.00 13.34 24.22 3 4 20.45 25.78 3 8 128 14.2 8.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EGSQLKQQIQSIQQSIER Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 369 4.85 0.00 1 8 25 3 700.70734 2100.10746 1.43 34.70 3259 3259 MS2 33/68 Linfeng_122411_rIgG_10.raw High QQIQSIQQSIER Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 527 3.08 0.00 0 40 100 2 729.39142 1457.77556 3.31 28.16 2521 2521 MS2 14/22 Linfeng_20120130_CHD1_10.raw High LLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 365 2.94 0.00 0 20 25 3 494.25494 1480.75028 2.56 30.92 2765 2765 MS2 28/44 Linfeng_122411_rIgG_10.raw High KLLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 428 2.89 0.00 1 19 25 3 536.95294 1608.84427 1.75 30.16 2663 2663 MS2 29/48 Linfeng_122411_rIgG_10.raw High PVIAcSVTIK Unambiguous 2 1 IPI00026167.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 454 2.77 0.00 0 10 100 2 544.31439 1087.62151 3.18 29.10 2665 2665 MS2 14/18 Linfeng_20120130_CHD1_10.raw High AYPLADAHLTK Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 511 2.75 0.00 0 15 100 2 600.32642 1199.64556 3.01 25.95 2181 2181 MS2 16/20 Linfeng_20120130_CHD1_10.raw High QQIQSIQQSIER Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 495 2.70 0.00 0 12 100 2 729.39215 1457.77703 4.32 27.29 2377 2377 MS2 14/22 Linfeng_20120130_CHD1_10.raw High LLDLVQQScNYK Unambiguous 2 1 IPI00026167.5 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 320 2.66 0.00 0 6 25 2 740.87891 1480.75054 2.74 30.84 2754 2754 MS2 19/22 Linfeng_122411_rIgG_10.raw High AYPLADAHLTK Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 553 2.61 0.00 0 23 100 2 600.32788 1199.64849 5.45 25.53 2114 2114 MS2 14/20 Linfeng_20120130_CHD1_10.raw High AYPLADAHLTK Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 503 2.27 0.00 0 23 100 2 600.32745 1199.64763 4.74 26.74 2301 2301 MS2 13/20 Linfeng_20120130_CHD1_10.raw High AYPLADAHLTK Unambiguous 2 1 IPI00026167.5 CID 1.0000 0.0000 1 1 485 2.27 0.00 0 39 100 2 600.32697 1199.64665 3.93 24.79 2029 2029 MS2 12/20 Linfeng_20120130_CHD1_10.raw High PVIAcSVTIK Unambiguous 2 1 IPI00026167.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 683 2.01 0.00 0 15 100 2 544.31384 1087.62041 2.17 28.09 2509 2509 MS2 13/18 Linfeng_20120130_CHD1_10.raw IPI00015953.3 Isoform 1 of Nucleolar RNA helicase 2 40.36 2 23 25 68 95.58 33.84 21 31 51.60 17.88 10 17 62.39 18.77 11 20 783 87.3 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 308 5.94 0.00 0 14 25 2 1054.55981 2108.11235 1.32 48.08 5738 5738 MS2 31/42 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 412 5.12 0.00 1 0 100 2 990.97253 1980.93779 4.68 38.20 3646 3646 MS2 23/32 Linfeng_20120130_CHD1_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 354 4.92 0.00 0 16 25 3 703.37756 2108.11814 4.06 47.12 4977 4977 MS2 44/84 Linfeng_122411_rIgG_3.raw High LGVcFDVPTASVTEIQEK Unambiguous 2 1 IPI00015953.3 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 280 4.68 0.00 0 3 24 2 996.99725 1992.98723 -3.78 38.43 4527 4527 MS2 25/34 Linfeng_091311_rIgG_3.raw High LGVcFDVPTASVTEIQEK Unambiguous 2 1 IPI00015953.3 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 489 4.60 0.00 0 0 100 2 997.00586 1993.00444 4.86 46.56 5253 5253 MS2 23/34 Linfeng_20120130_CHD1_3.raw High LSVAcFYGGTPYGGQFER Unambiguous 2 1 IPI00015953.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 136 4.43 0.00 0 12 25 2 1004.96161 2008.91594 -3.14 37.93 4464 4464 MS2 21/34 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 395 4.42 0.00 1 0 100 2 990.97009 1980.93291 2.21 38.69 3740 3740 MS2 21/32 Linfeng_20120130_CHD1_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 366 4.10 0.00 0 8 25 3 703.37469 2108.10953 -0.02 47.94 5720 5720 MS2 45/84 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 365 4.01 0.00 0 17 25 3 703.37677 2108.11576 2.93 47.07 5078 5078 MS2 38/84 Linfeng_122411_rIgG_4.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 301 3.99 0.00 0 2 17 2 920.46271 1839.91814 -2.99 36.26 4252 4252 MS2 21/30 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 209 3.98 0.00 1 9 25 3 660.97949 1980.92392 -2.32 32.24 3732 3732 MS2 33/64 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 491 3.97 0.00 0 11 100 2 834.91339 1668.81951 4.72 44.97 4906 4906 MS2 20/28 Linfeng_20120130_CHD1_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 225 3.84 0.00 1 12 25 3 660.98212 1980.93180 1.65 31.43 2958 2958 MS2 32/64 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 476 3.74 0.00 0 12 100 2 834.91315 1668.81902 4.43 45.34 5805 5805 MS2 19/28 Linfeng_20120130_CHD1_4.raw High GLDIPEVDLVIQSSPPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 248 3.70 0.00 0 22 25 2 903.99622 1806.98516 0.17 42.50 5038 5038 MS2 25/32 Linfeng_091311_rIgG_3.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 535 3.70 0.00 0 33 100 2 920.46899 1839.93071 3.84 43.10 4494 4494 MS2 18/30 Linfeng_20120130_CHD1_3.raw High DSEDNPQTLLFSATcPHWVFNVAK Unambiguous 2 1 IPI00015953.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 3.65 0.00 0 4 25 3 926.10870 2776.31156 2.85 44.72 4668 4668 MS2 33/92 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 255 3.55 0.00 0 5 25 2 834.90900 1668.81072 -0.54 36.17 3565 3565 MS2 20/28 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 506 3.46 0.00 0 11 100 2 834.91327 1668.81926 4.58 45.14 5762 5762 MS2 16/28 Linfeng_20120130_CHD1_4.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 88 3.26 0.00 1 5 25 3 459.94803 1377.82953 -2.21 28.36 3212 3212 MS2 22/48 Linfeng_091311_rIgG_3.raw High SDKTEEIAEEEETVFPK Unambiguous 1 1 IPI00015953.3 CID 1.0000 0.0000 1 1 452 3.21 0.00 1 11 100 3 660.98431 1980.93839 4.98 38.08 3622 3622 MS2 30/64 Linfeng_20120130_CHD1_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 364 3.19 0.00 0 9 25 2 626.82635 1252.64543 2.74 28.31 2548 2548 MS2 17/20 Linfeng_122411_rIgG_3.raw High DSEDNPQTLLFSATcPHWVFNVAK Unambiguous 2 1 IPI00015953.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 3.18 0.00 0 19 25 3 926.10645 2776.30478 0.41 45.60 5428 5428 MS2 37/92 Linfeng_091311_rIgG_3.raw High GAVEALAAALAHISGATSVDQR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 379 3.15 0.00 0 28 25 3 703.37427 2108.10825 -0.63 48.22 5756 5756 MS2 41/84 Linfeng_091311_rIgG_4.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 70 3.14 0.00 0 8 25 2 582.86005 1164.71282 2.43 30.08 2783 2783 MS2 19/20 Linfeng_122411_rIgG_3.raw High LGVcFDVPTASVTEIQEK Unambiguous 2 1 IPI00015953.3 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 341 3.14 0.00 0 2 21 3 665.00079 1992.98783 -3.48 38.52 4539 4539 MS2 27/68 Linfeng_091311_rIgG_3.raw High GLDIPEVDLVIQSSPPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 319 3.14 0.00 0 7 25 3 602.99927 1806.98325 -0.89 42.47 5035 5035 MS2 30/64 Linfeng_091311_rIgG_3.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 95 3.10 0.00 0 6 8 2 582.85699 1164.70671 -2.81 31.82 3677 3677 MS2 18/20 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 385 3.05 0.00 0 16 25 3 464.90375 1392.69669 -2.79 28.55 3239 3239 MS2 26/40 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 361 3.02 0.00 0 23 25 2 696.85211 1392.69695 -2.61 28.50 3231 3231 MS2 18/20 Linfeng_091311_rIgG_3.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 3.01 0.00 1 34 25 3 459.94998 1377.83539 2.05 25.08 2119 2119 MS2 20/48 Linfeng_122411_rIgG_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 369 2.99 0.00 0 21 25 2 626.82617 1252.64507 2.45 28.47 2713 2713 MS2 17/20 Linfeng_122411_rIgG_4.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 385 2.98 0.00 0 5 25 2 626.82281 1252.63835 -2.91 29.99 3433 3433 MS2 17/20 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 621 2.91 0.00 0 42 100 2 696.85699 1392.70671 4.40 27.22 1816 1816 MS2 14/20 Linfeng_20120130_CHD1_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 534 2.81 0.00 0 23 100 2 626.82660 1252.64592 3.13 31.02 2290 2290 MS2 16/20 Linfeng_20120130_CHD1_3.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 83 2.81 0.00 0 63 100 2 582.86078 1164.71428 3.69 36.38 3286 3286 MS2 15/20 Linfeng_20120130_CHD1_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 511 2.80 0.00 0 23 100 2 834.91321 1668.81914 4.51 45.55 5031 5031 MS2 13/28 Linfeng_20120130_CHD1_3.raw High LLDSVPPTAISHFK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 300 2.79 0.00 0 37 100 2 762.92615 1524.84502 1.90 40.41 4055 4055 MS2 13/26 Linfeng_20120130_CHD1_3.raw High KEAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 463 2.76 0.00 1 12 25 2 723.38245 1445.75762 -1.31 18.36 1827 1827 MS2 17/24 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 290 2.73 0.00 0 29 25 2 834.91187 1668.81645 2.90 36.25 3717 3717 MS2 17/28 Linfeng_122411_rIgG_4.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 103 2.73 0.00 0 46 25 2 582.85663 1164.70598 -3.44 31.85 3671 3671 MS2 16/20 Linfeng_091311_rIgG_4.raw High TFHHVYSGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 450 2.70 0.00 0 22 25 3 359.18256 1075.53312 1.06 11.65 941 941 MS2 16/32 Linfeng_091311_rIgG_3.raw High STYEQVDLIGK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 374 2.64 0.00 0 25 25 2 626.82269 1252.63811 -3.11 30.16 3448 3448 MS2 17/20 Linfeng_091311_rIgG_4.raw High ELKEQLGEEIDSK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 422 2.63 0.00 1 24 25 3 506.59256 1517.76313 -4.15 26.22 2921 2921 MS2 20/48 Linfeng_091311_rIgG_3.raw High NEEPSEEEIDAPKPK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 221 2.62 0.00 0 9 25 3 571.27075 1711.79770 -2.62 21.42 2253 2253 MS2 29/56 Linfeng_091311_rIgG_3.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 403 2.61 0.00 0 48 100 2 606.34277 1211.67827 3.25 40.74 4108 4108 MS2 13/22 Linfeng_20120130_CHD1_3.raw High IGVPSATEIIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 368 2.57 0.00 0 7 100 2 564.33929 1127.67131 3.73 37.70 3544 3544 MS2 15/20 Linfeng_20120130_CHD1_3.raw High KLSVAcFYGGTPYGGQFER Unambiguous 2 1 IPI00015953.3 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.57 0.00 1 11 24 3 713.00854 2137.01108 -2.87 34.44 4015 4015 MS2 29/72 Linfeng_091311_rIgG_3.raw High GRAPQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 2.50 0.00 1 55 25 3 459.95010 1377.83576 2.31 26.00 2386 2386 MS2 19/48 Linfeng_122411_rIgG_4.raw High EAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 405 2.50 0.00 0 3 25 2 659.33435 1317.66142 -2.37 20.93 2187 2187 MS2 17/22 Linfeng_091311_rIgG_3.raw Medium APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 75 2.49 0.00 0 24 25 3 388.90863 1164.71134 1.16 30.20 2798 2798 MS2 21/40 Linfeng_122411_rIgG_3.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 311 2.47 0.00 0 22 25 2 606.33905 1211.67082 -2.89 34.77 4058 4058 MS2 17/22 Linfeng_091311_rIgG_3.raw High EEYQLVQVEQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 364 2.43 0.00 0 5 25 2 696.85217 1392.69707 -2.52 28.69 3252 3252 MS2 17/20 Linfeng_091311_rIgG_4.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 246 2.43 0.00 0 18 25 2 610.85657 1220.70586 1.66 40.15 4205 4205 MS2 15/20 Linfeng_122411_rIgG_4.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 234 2.39 0.00 0 2 25 2 633.36200 1265.71672 2.10 42.89 4431 4431 MS2 18/20 Linfeng_122411_rIgG_3.raw High APQVLVLAPTR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 81 2.35 0.00 0 70 100 2 582.86096 1164.71465 4.01 36.44 3298 3298 MS2 16/20 Linfeng_20120130_CHD1_3.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 239 2.34 0.00 0 7 24 2 610.85699 1220.70671 2.36 40.27 4091 4091 MS2 16/20 Linfeng_122411_rIgG_3.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 226 2.33 0.00 0 7 25 2 633.36249 1265.71770 2.87 42.80 4539 4539 MS2 15/20 Linfeng_122411_rIgG_4.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 258 2.23 0.00 0 17 25 2 610.85449 1220.70171 -1.74 41.49 4907 4907 MS2 13/20 Linfeng_091311_rIgG_4.raw High TAITVEHLAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 194 2.22 0.00 0 48 100 2 598.35828 1195.70928 3.95 34.02 2822 2822 MS2 14/20 Linfeng_20120130_CHD1_3.raw High GVTFLFPIQAK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 267 2.18 0.00 0 4 13 2 610.85419 1220.70110 -2.24 41.37 4898 4898 MS2 16/20 Linfeng_091311_rIgG_3.raw High TFSFAIPLIEK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 246 2.16 0.00 0 36 25 2 633.35999 1265.71269 -1.08 44.06 5233 5233 MS2 16/20 Linfeng_091311_rIgG_3.raw High TAITVEHLAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 193 2.15 0.00 0 44 100 2 598.35828 1195.70928 3.95 33.59 2738 2738 MS2 14/20 Linfeng_20120130_CHD1_3.raw High WQLSVATEQPELEGPR Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 358 2.10 0.00 0 11 25 2 920.46631 1839.92534 0.92 35.36 3461 3461 MS2 9/30 Linfeng_122411_rIgG_3.raw High EAQELSQNSAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 410 2.09 0.00 0 17 25 2 659.33459 1317.66191 -1.99 21.11 2202 2202 MS2 17/22 Linfeng_091311_rIgG_4.raw High LLDSVPPTAISHFK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 295 2.08 0.00 0 13 100 2 762.92719 1524.84709 3.26 40.30 4036 4036 MS2 11/26 Linfeng_20120130_CHD1_3.raw High TAITVEHLAIK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 171 2.08 0.00 0 49 100 2 598.35883 1195.71037 4.87 33.65 2751 2751 MS2 12/20 Linfeng_20120130_CHD1_3.raw High QDAQSLHGDIPQK Unambiguous 2 1 IPI00015953.3 CID 1.0000 0.0000 1 1 313 2.04 0.00 0 8 25 2 718.85895 1436.71062 -1.58 20.61 2143 2143 MS2 12/24 Linfeng_091311_rIgG_3.raw IPI00927677.1 34 kDa protein 40.25 8 14 14 36 58.89 27.99 9 17 31.62 21.38 6 9 33.63 16.35 4 10 318 34.5 9.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 350 4.47 0.00 0 13 25 2 885.94702 1770.88677 -2.36 43.34 5115 5115 MS2 26/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 351 4.43 0.00 0 21 25 2 885.94714 1770.88701 -2.22 43.39 5114 5114 MS2 25/30 Linfeng_091311_rIgG_7.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 28 4.41 0.00 0 3 14 3 637.60101 1910.78849 -0.81 4.38 481 481 MS2 42/84 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 518 4.31 0.00 1 9 100 3 628.32489 1882.96012 2.93 40.25 3434 3434 MS2 31/60 Linfeng_20120130_CHD1_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 352 4.20 0.00 1 3 6 3 628.32135 1882.94950 -2.71 32.20 3702 3702 MS2 35/60 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 4.19 0.00 0 0 25 2 955.89575 1910.78423 -3.04 23.08 2480 2480 MS2 27/42 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 4.09 0.00 0 2 7 2 955.89880 1910.79033 0.15 4.35 478 478 MS2 31/42 Linfeng_122411_rIgG_6.raw High GFAFVTFDDHDTVDK Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 237 4.02 0.00 0 0 100 2 857.39496 1713.78264 4.12 46.59 4594 4594 MS2 21/28 Linfeng_20120130_CHD1_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 28 3.89 0.00 0 40 25 3 637.60254 1910.79306 1.58 22.12 1924 1924 MS2 40/84 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 319 3.88 0.00 1 15 25 2 941.97852 1882.94975 -2.57 32.25 3709 3709 MS2 22/30 Linfeng_091311_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 355 3.81 0.00 0 22 25 2 885.95142 1770.89556 2.61 42.20 4509 4509 MS2 25/30 Linfeng_122411_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 27 3.77 0.00 0 14 25 3 637.59955 1910.78409 -3.11 23.13 2487 2487 MS2 40/84 Linfeng_091311_rIgG_6.raw High YGKIETIEVMEDR Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 286 3.66 0.00 1 23 25 3 528.26440 1582.77866 0.28 29.16 2863 2863 MS2 26/48 Linfeng_122411_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 19 3.65 0.00 0 0 25 2 955.89581 1910.78435 -2.98 23.16 2465 2465 MS2 28/42 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 350 3.65 0.00 1 7 25 3 628.32135 1882.94950 -2.71 32.28 3704 3704 MS2 34/60 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 518 3.65 0.00 1 9 100 3 628.32483 1882.95993 2.83 40.10 3416 3416 MS2 32/60 Linfeng_20120130_CHD1_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 516 3.63 0.00 1 10 100 3 628.32465 1882.95938 2.54 39.80 3380 3380 MS2 27/60 Linfeng_20120130_CHD1_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 23 3.58 0.00 0 5 25 2 955.90088 1910.79448 2.32 22.09 1920 1920 MS2 27/42 Linfeng_122411_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 567 3.47 0.00 1 8 100 3 628.32574 1882.96268 4.29 40.18 3428 3428 MS2 30/60 Linfeng_20120130_CHD1_6.raw High RGEEGHDPKEPEQLR Unambiguous 4 1 IPI00927677.1 CID 1.0000 0.0000 1 1 311 3.45 0.00 2 8 13 4 444.96982 1776.85744 -2.81 16.35 1554 1554 MS2 35/84 Linfeng_091311_rIgG_6.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 512 3.35 0.00 1 18 100 2 941.98297 1882.95867 2.16 39.82 3384 3384 MS2 16/30 Linfeng_20120130_CHD1_6.raw High KLFIGGLSFETTDDSLREHFEK Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 348 3.28 0.00 2 3 25 4 643.07727 2569.28725 -2.40 37.59 4396 4396 MS2 32/126 Linfeng_091311_rIgG_6.raw High KIFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 344 3.27 0.00 2 3 25 3 671.01978 2011.04477 -2.39 29.60 3359 3359 MS2 32/64 Linfeng_091311_rIgG_6.raw High KLFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 434 3.20 0.00 1 3 25 3 633.66846 1898.99082 2.58 38.50 4048 4048 MS2 26/64 Linfeng_122411_rIgG_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 343 3.17 0.00 0 41 25 2 885.94708 1770.88689 -2.29 44.39 5246 5246 MS2 20/30 Linfeng_091311_rIgG_6.raw High IETIEVMEDR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 462 3.16 0.00 0 21 100 2 617.80438 1234.60149 2.46 33.79 2573 2573 MS2 16/18 Linfeng_20120130_CHD1_6.raw Medium LFIGGLSFETTDDSLREHFEK Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 305 2.93 0.00 1 7 20 4 611.05383 2441.19350 -2.02 40.12 4714 4714 MS2 37/120 Linfeng_091311_rIgG_6.raw High SSGSPYGGGYGSGGGSGGYGSR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 27 2.90 0.00 0 12 25 3 637.59943 1910.78373 -3.31 23.19 2469 2469 MS2 28/84 Linfeng_091311_rIgG_7.raw High IFVGGIKEDTEEYNLR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 320 2.87 0.00 1 20 13 3 628.32385 1882.95700 1.28 31.25 3136 3136 MS2 31/60 Linfeng_122411_rIgG_6.raw High IETIEVMEDR Unambiguous 6 1 IPI00927677.1 CID 1.0000 0.0000 1 1 461 2.74 0.00 0 0 100 2 617.80255 1234.59783 -0.51 32.80 2426 2426 MS2 14/18 Linfeng_20120130_CHD1_6.raw High WGTLTDcVVmR Unambiguous 6 1 IPI00927677.1 C7(Carbamidomethyl); M10(Oxidation) CID 1.0000 0.0000 1 1 271 2.73 0.00 0 18 100 2 677.31885 1353.63042 1.02 36.40 2967 2967 MS2 16/20 Linfeng_20120130_CHD1_6.raw High LFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 374 2.65 0.00 0 15 25 3 590.96741 1770.88767 -1.85 43.45 5129 5129 MS2 28/60 Linfeng_091311_rIgG_6.raw High WGTLTDcVVMR Unambiguous 6 1 IPI00927677.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 350 2.57 0.00 0 61 100 2 669.32275 1337.63823 3.07 42.54 3758 3758 MS2 14/20 Linfeng_20120130_CHD1_6.raw High KLFIGGLSFETTDDSLR Unambiguous 8 1 IPI00927677.1 CID 1.0000 0.0000 1 1 382 2.50 0.00 1 32 25 3 633.66553 1898.98203 -2.04 39.20 4599 4599 MS2 26/64 Linfeng_091311_rIgG_6.raw High EDSVKPGAHLTVK Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 364 2.47 0.00 0 0 25 2 690.87708 1380.74687 -0.98 19.08 1932 1932 MS2 18/24 Linfeng_091311_rIgG_6.raw High EDTEEYNLR Unambiguous 7 1 IPI00927677.1 CID 1.0000 0.0000 1 1 102 2.09 0.00 0 5 25 2 584.76129 1168.51531 3.08 16.77 1348 1348 MS2 14/16 Linfeng_122411_rIgG_6.raw IPI00007765.5 "Stress-70 protein, mitochondrial" 39.62 4 22 22 60 57.06 26.95 15 19 72.67 23.71 12 21 66.85 25.63 11 20 679 73.6 6.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 184 5.68 0.00 0 3 25 2 1028.48767 2055.96807 3.00 40.56 4257 4257 MS2 25/36 Linfeng_122411_rIgG_4.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 201 5.46 0.00 0 3 23 3 685.99402 2055.96750 2.73 40.55 4256 4256 MS2 42/72 Linfeng_122411_rIgG_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 534 4.78 0.00 0 14 100 2 904.95911 1808.91094 4.63 31.80 2994 2994 MS2 19/32 Linfeng_20120130_CHD1_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 396 4.66 0.00 0 18 25 3 603.63977 1808.90476 1.21 28.19 2676 2676 MS2 36/64 Linfeng_122411_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 501 4.64 0.00 0 12 100 2 823.44501 1645.88274 1.88 43.66 5421 5421 MS2 24/30 Linfeng_20120130_CHD1_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 553 4.58 0.00 0 17 100 2 904.95795 1808.90862 3.35 30.42 2712 2712 MS2 21/32 Linfeng_20120130_CHD1_4.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 135 4.48 0.00 0 10 25 2 1028.48291 2055.95854 -1.63 41.65 4928 4928 MS2 25/36 Linfeng_091311_rIgG_4.raw High SDIGEVILVGGmTR Unambiguous 2 1 IPI00007765.5 M12(Oxidation) CID 1.0000 0.0000 1 1 600 4.37 0.00 0 6 100 2 731.88562 1462.76396 4.69 42.08 5084 5084 MS2 21/26 Linfeng_20120130_CHD1_4.raw High MEEFKDQLPADEcNK Unambiguous 2 1 IPI00007765.5 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 147 4.29 0.00 1 6 100 2 927.40845 1853.80962 2.75 26.75 2000 2000 MS2 18/28 Linfeng_20120130_CHD1_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 404 4.20 0.00 0 16 25 3 549.29956 1645.88413 2.73 35.24 3589 3589 MS2 37/60 Linfeng_122411_rIgG_4.raw High SQVFSTAADGQTQVEIK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 353 4.13 0.00 0 0 25 2 904.95776 1808.90825 3.15 27.81 2625 2625 MS2 23/32 Linfeng_122411_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 439 4.12 0.00 0 5 17 3 549.29669 1645.87552 -2.50 36.38 4260 4260 MS2 37/60 Linfeng_091311_rIgG_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 410 4.09 0.00 0 5 25 3 454.58432 1361.73841 -2.94 41.98 4969 4969 MS2 29/44 Linfeng_091311_rIgG_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 337 4.08 0.00 0 4 25 2 823.44543 1645.88359 2.40 35.30 3596 3596 MS2 26/30 Linfeng_122411_rIgG_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 366 3.92 0.00 0 1 25 3 454.58698 1361.74637 2.91 40.66 4270 4270 MS2 30/44 Linfeng_122411_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 545 3.92 0.00 0 8 100 2 621.84589 1242.68450 3.50 39.03 4486 4486 MS2 18/22 Linfeng_20120130_CHD1_4.raw High STNGDTFLGGEDFDQALLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 160 3.85 0.00 0 26 25 3 685.99042 2055.95670 -2.53 41.61 4923 4923 MS2 40/72 Linfeng_091311_rIgG_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 335 3.79 0.00 0 4 25 2 681.37701 1361.74675 3.19 40.65 4269 4269 MS2 19/22 Linfeng_122411_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 458 3.71 0.00 0 3 25 3 414.89893 1242.68222 1.68 33.38 3354 3354 MS2 30/44 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 330 3.63 0.00 0 5 25 3 565.62250 1694.85294 1.90 34.76 3530 3530 MS2 31/56 Linfeng_122411_rIgG_4.raw High SDIGEVILVGGmTR Unambiguous 2 1 IPI00007765.5 M12(Oxidation) CID 1.0000 0.0000 1 1 655 3.57 0.00 0 6 100 2 731.88593 1462.76457 5.11 42.02 5074 5074 MS2 22/26 Linfeng_20120130_CHD1_4.raw High AQFEGIVTDLIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 377 3.57 0.00 0 13 25 2 681.37329 1361.73931 -2.28 41.90 4959 4959 MS2 19/22 Linfeng_091311_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 421 3.53 0.00 0 16 25 2 621.84161 1242.67595 -3.37 34.51 4017 4017 MS2 20/22 Linfeng_091311_rIgG_4.raw High SDIGEVILVGGmTR Unambiguous 2 1 IPI00007765.5 M12(Oxidation) CID 1.0000 0.0000 1 1 607 3.50 0.00 0 28 100 2 731.88483 1462.76238 3.61 41.71 5011 5011 MS2 19/26 Linfeng_20120130_CHD1_4.raw High VINEPTAAALAYGLDK Unambiguous 1 1 IPI00007765.5 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 17 16 2 823.44067 1645.87407 -3.38 36.37 4258 4258 MS2 25/30 Linfeng_091311_rIgG_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 436 3.39 0.00 0 5 16 2 621.84485 1242.68242 1.83 33.22 3333 3333 MS2 20/22 Linfeng_122411_rIgG_4.raw High GAVVGIDLGTTNScVAVMEGK Unambiguous 1 1 IPI00007765.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 548 3.30 0.00 0 83 100 2 1039.52197 2078.03667 5.24 45.03 5738 5738 MS2 15/40 Linfeng_20120130_CHD1_4.raw High VEAVNMAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 615 3.20 0.00 0 31 78 3 619.64166 1856.91043 2.41 48.18 6457 6457 MS2 25/64 Linfeng_20120130_CHD1_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 350 3.17 0.00 0 14 25 3 565.61969 1694.84452 -3.07 35.91 4199 4199 MS2 33/56 Linfeng_091311_rIgG_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 566 3.14 0.00 0 12 100 2 725.86456 1450.72185 3.12 33.84 3452 3452 MS2 19/26 Linfeng_20120130_CHD1_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 547 3.12 0.00 0 18 25 3 430.89868 1290.68149 1.05 32.08 3187 3187 MS2 22/40 Linfeng_122411_rIgG_4.raw High VEAVNmAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 M6(Oxidation) CID 1.0000 0.0000 1 1 507 3.06 0.00 0 21 100 3 624.97424 1872.90818 3.90 37.26 4155 4155 MS2 26/64 Linfeng_20120130_CHD1_4.raw High DAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 558 3.05 0.00 0 25 100 2 621.84576 1242.68425 3.31 38.88 4453 4453 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 45 2.96 0.00 0 8 25 3 531.65723 1592.95713 2.99 42.22 4467 4467 MS2 29/56 Linfeng_122411_rIgG_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 327 2.94 0.00 0 11 25 2 725.86102 1450.71477 -1.76 30.76 3529 3529 MS2 20/26 Linfeng_091311_rIgG_4.raw High QAVTNPNNTFYATK Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 254 2.89 0.00 0 1 25 2 784.88739 1568.76750 -1.84 25.15 2767 2767 MS2 19/26 Linfeng_091311_rIgG_4.raw High VEAVNmAEGIIHDTETK Unambiguous 2 1 IPI00007765.5 M6(Oxidation) CID 1.0000 0.0000 1 1 551 2.86 0.00 0 28 100 3 624.97449 1872.90891 4.29 37.44 4184 4184 MS2 25/64 Linfeng_20120130_CHD1_4.raw High QATKDAGQISGLNVLR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 383 2.85 0.00 1 19 25 3 557.64563 1670.92234 2.30 27.70 2611 2611 MS2 29/60 Linfeng_122411_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 449 2.79 0.00 0 2 16 2 645.84406 1290.68083 0.54 32.01 3177 3177 MS2 17/20 Linfeng_122411_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 654 2.71 0.00 0 24 100 2 645.84552 1290.68376 2.81 39.32 4552 4552 MS2 16/20 Linfeng_20120130_CHD1_4.raw High EQQIVIQSSGGLSKDDIENMVK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 592 2.70 0.00 1 32 100 3 806.74811 2418.22977 4.78 41.63 4997 4997 MS2 25/84 Linfeng_20120130_CHD1_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 438 2.66 0.00 0 35 25 2 645.84222 1290.67717 -2.29 33.33 3864 3864 MS2 17/20 Linfeng_091311_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 630 2.65 0.00 0 26 100 2 645.84552 1290.68376 2.81 38.66 4410 4410 MS2 17/20 Linfeng_20120130_CHD1_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 41 2.62 0.00 0 10 25 2 796.98236 1592.95745 3.19 42.23 4468 4468 MS2 20/28 Linfeng_122411_rIgG_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 45 2.62 0.00 0 9 25 2 796.97852 1592.94975 -1.64 43.71 5188 5188 MS2 21/28 Linfeng_091311_rIgG_4.raw High EQQIVIQSSGGLSK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 348 2.56 0.00 0 22 25 2 737.39673 1473.78618 -3.14 26.77 2989 2989 MS2 23/26 Linfeng_091311_rIgG_4.raw High LLGQFTLIGIPPAPR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 52 2.52 0.00 0 42 25 3 531.65753 1592.95804 3.57 43.51 4629 4629 MS2 20/56 Linfeng_122411_rIgG_4.raw High TTPSVVAFTADGER Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 345 2.46 0.00 0 20 25 2 725.86389 1450.72051 2.20 29.25 2818 2818 MS2 18/26 Linfeng_122411_rIgG_4.raw High DSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 134 2.36 0.00 0 30 25 2 510.73230 1020.45732 -1.93 16.25 1518 1518 MS2 13/16 Linfeng_091311_rIgG_4.raw High QAASSLQQASLK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 492 2.36 0.00 0 5 20 2 616.33600 1231.66472 0.47 3.30 335 335 MS2 18/22 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 485 2.33 0.00 0 6 100 2 847.93286 1694.85845 5.15 43.14 5302 5302 MS2 14/28 Linfeng_20120130_CHD1_4.raw High QAASSLQQASLK Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 509 2.32 0.00 0 8 19 2 616.33295 1231.65862 -4.49 21.90 2313 2313 MS2 19/22 Linfeng_091311_rIgG_4.raw High VLENAEGAR Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 341 2.24 0.00 0 37 25 2 479.75024 958.49321 -2.17 16.84 1601 1601 MS2 14/16 Linfeng_091311_rIgG_4.raw High QAVTNPNNTFYATK Unambiguous 3 1 IPI00007765.5 CID 1.0000 0.0000 1 1 292 2.24 0.00 0 2 4 2 784.88843 1568.76958 -0.52 4.10 462 462 MS2 15/26 Linfeng_122411_rIgG_4.raw High NAVITVPAYFNDSQR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 534 2.17 0.00 0 40 100 2 847.93243 1694.85759 4.64 42.57 5180 5180 MS2 11/28 Linfeng_20120130_CHD1_4.raw High KDSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 319 2.12 0.00 1 16 25 2 574.78021 1148.55315 -0.97 11.27 902 902 MS2 13/18 Linfeng_091311_rIgG_4.raw High VQQTVQDLFGR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 503 2.10 0.00 0 14 25 2 645.84375 1290.68022 0.07 32.15 3051 3051 MS2 16/20 Linfeng_122411_rIgG_3.raw High DQLPADEcNK Unambiguous 2 1 IPI00007765.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 69 2.06 0.00 0 22 25 2 595.25964 1189.51201 -2.88 18.27 1803 1803 MS2 13/18 Linfeng_091311_rIgG_4.raw High KDSETGENIR Unambiguous 2 1 IPI00007765.5 CID 1.0000 0.0000 1 1 326 2.03 0.00 1 14 25 2 574.77972 1148.55217 -1.82 10.25 822 822 MS2 13/18 Linfeng_091311_rIgG_4.raw High SDIGEVILVGGmTR Unambiguous 2 1 IPI00007765.5 M12(Oxidation) CID 1.0000 0.0000 1 1 634 2.03 0.00 0 27 100 2 731.88898 1462.77068 9.28 42.43 5152 5152 MS2 15/26 Linfeng_20120130_CHD1_4.raw IPI00796636.14 Hemoglobin (Fragment) 39.05 3 3 3 6 18.07 39.05 3 6 105 11.5 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FFESFGDLSTPDAVmGNPK Unambiguous 3 1 IPI00796636.14 M15(Oxidation) CID 1.0000 0.0000 1 1 269 4.75 0.00 0 0 100 2 1037.97827 2074.94927 3.14 46.59 6086 6086 MS2 22/36 Linfeng_20120130_CHD1_1.raw High VNVDEVGGEALGR Unambiguous 3 1 IPI00796636.14 CID 1.0000 0.0000 1 1 437 3.26 0.00 0 19 100 2 657.83813 1314.66899 3.11 29.11 2362 2362 MS2 17/24 Linfeng_20120130_CHD1_1.raw High VNVDEVGGEALGR Unambiguous 3 1 IPI00796636.14 CID 1.0000 0.0000 1 1 413 2.75 0.00 0 23 100 2 657.83844 1314.66960 3.58 29.91 2139 2139 MS2 15/24 Linfeng_20120130_CHD1_3.raw High VNVDEVGGEALGR Unambiguous 3 1 IPI00796636.14 CID 1.0000 0.0000 1 1 457 2.67 0.00 0 19 100 2 657.83826 1314.66924 3.30 30.13 2536 2536 MS2 16/24 Linfeng_20120130_CHD1_1.raw High VNVDEVGGEALGR Unambiguous 3 1 IPI00796636.14 CID 1.0000 0.0000 1 1 466 2.57 0.00 0 13 100 2 657.83868 1314.67009 3.95 29.95 2145 2145 MS2 16/24 Linfeng_20120130_CHD1_3.raw High SAVTALWGK Unambiguous 3 1 IPI00796636.14 CID 1.0000 0.0000 1 1 529 2.05 0.00 0 36 100 2 466.76547 932.52367 3.89 36.72 3902 3902 MS2 13/16 Linfeng_20120130_CHD1_1.raw IPI00789477.1 "cDNA FLJ58679, highly similar to Lactotransferrin" 37.39 3 1 19 21 71.22 37.39 19 21 666 73.1 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 374 5.39 0.00 0 10 15 3 696.69568 2088.07248 -1.73 45.99 5603 5603 MS2 40/72 Linfeng_091311_rIgG_10.raw High DSPIQcIQAIAENR Unambiguous 8 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 5.11 0.00 0 15 25 3 538.93390 1614.78714 -2.08 41.52 5038 5038 MS2 32/52 Linfeng_091311_rIgG_10.raw High DVTVLQNTDGNNNEAWAK Unambiguous 2 1 IPI00789477.1 CID 1.0000 0.0000 1 1 187 4.99 0.00 0 3 25 2 994.96423 1988.92119 -4.89 31.79 3775 3775 MS2 24/34 Linfeng_091311_rIgG_10.raw High SQQSSDPDPNcVDRPVEGYLAVAVVR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.98 0.00 0 4 22 3 953.45874 2858.36167 -4.27 36.43 4386 4386 MS2 37/100 Linfeng_091311_rIgG_10.raw High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 334 4.76 0.00 0 12 25 2 1044.54004 2088.07280 -1.58 46.00 5605 5605 MS2 25/36 Linfeng_091311_rIgG_10.raw High SNLcALcIGDEQGENK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 4.04 0.00 0 17 25 2 904.39893 1807.79057 -2.45 30.45 3595 3595 MS2 22/30 Linfeng_091311_rIgG_10.raw High FDEYFSQScAPGSDPR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 15 3.80 0.00 0 4 25 2 931.88385 1862.76042 -2.50 30.44 3594 3594 MS2 22/30 Linfeng_091311_rIgG_10.raw High KGGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 465 3.78 0.00 1 11 25 3 506.94531 1518.82138 -4.05 32.07 3813 3813 MS2 24/52 Linfeng_091311_rIgG_10.raw High LADFALLcLDGK Unambiguous 3 2 IPI00789477.1;IPI00903112.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.39 0.00 0 32 25 2 668.35144 1335.69560 -1.63 41.80 5074 5074 MS2 19/22 Linfeng_091311_rIgG_10.raw High THYYAVAVVK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 382 2.91 0.00 0 13 25 3 384.21240 1150.62265 -2.51 23.99 2692 2692 MS2 21/36 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 450 2.85 0.00 0 6 25 3 487.59842 1460.78070 -3.40 24.80 2808 2808 MS2 26/48 Linfeng_091311_rIgG_10.raw High DGAGDVAFIR Unambiguous 5 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 359 2.82 0.00 0 39 25 2 510.75729 1020.50731 -3.57 31.03 3673 3673 MS2 15/18 Linfeng_091311_rIgG_10.raw High NLLFNDNTEcLAR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 2.79 0.00 0 15 25 2 790.37579 1579.74431 -5.74 35.26 4233 4233 MS2 20/24 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 396 2.66 0.00 0 8 25 2 730.89404 1460.78081 -3.33 24.88 2819 2819 MS2 18/24 Linfeng_091311_rIgG_10.raw High cLAENAGDVAFVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.65 0.00 0 5 25 2 697.33984 1393.67241 -4.09 30.74 3633 3633 MS2 20/24 Linfeng_091311_rIgG_10.raw High VVWcAVGEQELR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.52 0.00 0 15 25 2 723.36212 1445.71697 -2.54 33.46 3995 3995 MS2 18/22 Linfeng_091311_rIgG_10.raw High GGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 398 2.51 0.00 0 24 25 2 695.86725 1390.72722 -3.85 35.77 4300 4300 MS2 16/24 Linfeng_091311_rIgG_10.raw High SDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 254 2.46 0.00 0 7 25 2 619.30457 1237.60185 -3.31 29.40 3451 3451 MS2 18/20 Linfeng_091311_rIgG_10.raw High EDAIWNLLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 401 2.29 0.00 0 37 25 2 565.30280 1129.59831 -1.57 43.57 5297 5297 MS2 15/16 Linfeng_091311_rIgG_10.raw High FQLFGSPSGQK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 323 2.29 0.00 0 4 16 2 598.30554 1195.60381 -5.72 33.73 4031 4031 MS2 15/20 Linfeng_091311_rIgG_10.raw High FFSAScVPGADK Unambiguous 5 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 2.20 0.00 0 4 25 2 643.29626 1285.58525 -2.30 29.21 3425 3425 MS2 19/22 Linfeng_091311_rIgG_10.raw IPI00297579.4 Chromobox protein homolog 3 37.16 1 6 6 8 14.77 21.31 5 5 13.43 30.05 3 3 183 20.8 5.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFTDADNTWEPEENLDcPELIEAFLNSQK Unambiguous 1 1 IPI00297579.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 71 6.08 0.00 0 1 25 3 1128.17725 3382.51719 3.38 49.89 5228 5228 MS2 34/112 Linfeng_122411_rIgG_8.raw High WKDSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 429 4.13 0.00 1 14 25 3 497.25690 1489.75614 1.85 27.50 2388 2388 MS2 36/48 Linfeng_122411_rIgG_8.raw High WKDSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 408 3.87 0.00 1 5 25 3 497.25479 1489.74982 -2.39 30.17 3420 3420 MS2 32/48 Linfeng_091311_rIgG_9.raw High VEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 252 3.50 0.00 0 24 25 2 767.36835 1533.72942 -1.67 30.77 3499 3499 MS2 20/24 Linfeng_091311_rIgG_9.raw High VEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 281 3.22 0.00 0 18 25 2 767.37152 1533.73577 2.47 28.54 2521 2521 MS2 19/24 Linfeng_122411_rIgG_8.raw High KVEEAEPEEFVVEK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 405 2.65 0.00 1 15 25 3 554.61230 1661.82236 -2.76 27.65 3081 3081 MS2 23/52 Linfeng_091311_rIgG_9.raw High LTWHScPEDEAQ Unambiguous 1 1 IPI00297579.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 17 2.60 0.00 0 21 25 2 736.80615 1472.60503 -4.14 26.27 2891 2891 MS2 16/22 Linfeng_091311_rIgG_9.raw High DSDEADLVLAK Unambiguous 1 1 IPI00297579.4 CID 1.0000 0.0000 1 1 359 2.14 0.00 0 24 25 2 588.29163 1175.57598 -2.65 30.28 3435 3435 MS2 17/20 Linfeng_091311_rIgG_9.raw IPI00012074.3 Isoform 1 of Heterogeneous nuclear ribonucleoprotein R 36.65 4 2 23 59 86.64 31.44 18 32 65.47 26.70 15 21 17.62 9.95 5 6 633 70.9 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 333 4.48 0.00 1 0 25 3 879.11920 2635.34305 1.02 33.88 3418 3418 MS2 42/100 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 321 4.43 0.00 1 5 21 3 879.11639 2635.33463 -2.18 34.89 4066 4066 MS2 38/100 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 477 4.41 0.00 0 2 25 3 487.59863 1460.78135 -2.04 42.64 5052 5052 MS2 30/48 Linfeng_091311_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 541 4.27 0.00 0 31 100 3 836.42407 2507.25766 4.89 45.51 5842 5842 MS2 32/96 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 487 4.21 0.00 0 3 25 3 487.60062 1460.78730 2.03 41.48 4373 4373 MS2 28/48 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 533 4.03 0.00 0 26 100 3 836.42395 2507.25730 4.75 45.61 5863 5863 MS2 29/96 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 434 3.92 0.00 0 5 25 2 730.89764 1460.78801 2.52 41.60 4434 4434 MS2 21/24 Linfeng_122411_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 442 3.88 0.00 0 3 19 2 730.89813 1460.78899 3.19 41.38 4360 4360 MS2 21/24 Linfeng_122411_rIgG_4.raw High AIDALREFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 320 3.62 0.00 1 13 25 3 793.41888 2378.24210 2.91 45.13 4835 4835 MS2 28/80 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 262 3.52 0.00 0 6 25 2 805.40656 1609.80583 3.84 45.06 4873 4873 MS2 20/24 Linfeng_122411_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 298 3.51 0.00 0 21 25 3 836.42126 2507.24924 1.54 37.04 3817 3817 MS2 34/96 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 344 3.40 0.00 0 32 25 2 869.93854 1738.86980 2.92 43.10 4576 4576 MS2 20/28 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 350 3.34 0.00 0 18 25 3 580.29474 1738.86966 2.84 43.06 4572 4572 MS2 31/56 Linfeng_122411_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 482 3.16 0.00 0 6 25 2 730.89484 1460.78240 -1.32 42.76 5043 5043 MS2 21/24 Linfeng_091311_rIgG_6.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 229 3.15 0.00 0 21 25 2 805.40265 1609.79802 -1.01 46.11 5462 5462 MS2 20/24 Linfeng_091311_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 432 3.11 0.00 0 11 25 2 730.89441 1460.78154 -1.91 42.52 5036 5036 MS2 21/24 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 260 3.10 0.00 0 3 25 2 805.40582 1609.80437 2.93 44.81 4794 4794 MS2 20/24 Linfeng_122411_rIgG_4.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 349 3.07 0.00 1 16 25 3 513.92316 1539.75492 -2.72 30.41 3483 3483 MS2 26/44 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 3.02 0.00 0 6 21 2 582.28241 1163.55754 1.81 35.39 3607 3607 MS2 15/18 Linfeng_122411_rIgG_4.raw Medium VTEGLVDVILYHQPDDKKK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 281 3.00 0.00 2 4 25 5 440.24393 2197.19053 1.88 33.16 3326 3326 MS2 42/144 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 3.00 0.00 0 32 25 2 869.93451 1738.86174 -1.71 44.33 5264 5264 MS2 19/28 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 23 25 2 535.31720 1069.62712 1.76 26.39 2438 2438 MS2 16/18 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 13 15 2 805.40234 1609.79741 -1.39 46.04 5479 5479 MS2 20/24 Linfeng_091311_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 334 2.91 0.00 0 19 25 3 580.29218 1738.86197 -1.58 44.35 5266 5266 MS2 32/56 Linfeng_091311_rIgG_4.raw High VTEGLVDVILYHQPDDK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 408 2.85 0.00 0 1 25 3 647.67145 1940.99979 1.71 38.40 3988 3988 MS2 27/64 Linfeng_122411_rIgG_4.raw High VTEGLVDVILYHQPDDK Unambiguous 3 1 IPI00012074.3 CID 1.0000 0.0000 1 1 400 2.84 0.00 0 6 22 3 647.66791 1940.98917 -3.76 39.31 4631 4631 MS2 33/64 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.75 0.00 1 9 14 4 385.69418 1539.75490 -2.73 30.39 3481 3481 MS2 29/66 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 431 2.71 0.00 1 8 25 3 430.21945 1288.64380 4.50 2.91 277 277 MS2 23/44 Linfeng_122411_rIgG_4.raw High ESDLSHVQNK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.70 0.00 0 21 25 2 578.78235 1156.55742 -1.65 14.89 1324 1324 MS2 13/18 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 446 2.70 0.00 0 12 100 2 582.28333 1163.55937 3.38 44.83 5695 5695 MS2 14/18 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 456 2.68 0.00 0 10 25 2 730.89496 1460.78264 -1.16 42.56 5046 5046 MS2 19/24 Linfeng_091311_rIgG_3.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.68 0.00 0 6 24 2 582.28015 1163.55303 -2.07 36.47 4271 4271 MS2 15/18 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 313 2.65 0.00 0 11 25 3 580.29211 1738.86179 -1.69 44.44 5252 5252 MS2 25/56 Linfeng_091311_rIgG_6.raw High KADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 220 2.60 0.00 1 32 25 3 408.19482 1222.56992 0.01 11.94 976 976 MS2 19/40 Linfeng_091311_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 2.59 0.00 0 33 25 3 836.41833 2507.24045 -1.97 38.14 4484 4484 MS2 27/96 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 309 2.57 0.00 0 7 25 3 537.27313 1609.80484 3.23 44.89 4805 4805 MS2 32/48 Linfeng_122411_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 422 2.56 0.00 1 7 25 3 446.56873 1337.69162 -2.36 31.81 3665 3665 MS2 22/40 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 250 2.43 0.00 0 48 25 2 805.40332 1609.79936 -0.18 45.94 5470 5470 MS2 18/24 Linfeng_091311_rIgG_3.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 457 2.41 0.00 0 30 100 2 464.25790 927.50853 4.10 42.48 5163 5163 MS2 11/14 Linfeng_20120130_CHD1_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.40 0.00 0 11 25 2 805.40601 1609.80474 3.16 44.94 4697 4697 MS2 16/24 Linfeng_122411_rIgG_3.raw High ADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 68 2.38 0.00 0 16 25 2 547.74078 1094.47429 -0.59 13.98 1197 1197 MS2 14/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 162 2.36 0.00 0 35 25 2 535.31470 1069.62212 -2.92 28.59 3238 3238 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 175 2.35 0.00 0 36 25 2 535.31482 1069.62236 -2.69 28.83 3258 3258 MS2 15/18 Linfeng_091311_rIgG_6.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw High LmMDPLSGQNR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 M2(Oxidation) CID 1.0000 0.0000 1 1 322 2.21 0.00 0 29 100 2 639.30487 1277.60246 3.69 27.89 2219 2219 MS2 15/20 Linfeng_20120130_CHD1_4.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 315 2.14 0.00 1 12 25 2 644.82178 1288.63628 -1.34 2.91 271 271 MS2 12/22 Linfeng_091311_rIgG_4.raw High KADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.09 0.00 1 15 25 2 611.78748 1222.56767 -1.82 2.85 262 262 MS2 15/20 Linfeng_091311_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 83 2.04 0.00 0 7 25 2 879.89374 1758.78020 2.48 25.15 2271 2271 MS2 14/26 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 266 2.03 0.00 0 34 25 2 805.40240 1609.79753 -1.32 46.19 5465 5465 MS2 17/24 Linfeng_091311_rIgG_7.raw High LcDSYEIRPGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.02 0.00 0 27 25 2 669.32794 1337.64861 -2.44 23.40 2522 2522 MS2 15/20 Linfeng_091311_rIgG_4.raw High ENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 479 2.01 0.00 0 23 100 2 554.78174 1108.55620 3.67 46.31 6022 6022 MS2 12/16 Linfeng_20120130_CHD1_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 458 2.01 0.00 1 18 25 2 669.35229 1337.69731 1.89 30.55 2987 2987 MS2 15/20 Linfeng_122411_rIgG_4.raw High LFVGSIPK Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00644055.3 Isoform 2 of Heterogeneous nuclear ribonucleoprotein R 36.64 3 1 22 57 86.70 31.76 18 32 59.62 23.58 13 19 17.62 9.91 5 6 636 71.2 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 333 4.48 0.00 1 0 25 3 879.11920 2635.34305 1.02 33.88 3418 3418 MS2 42/100 Linfeng_122411_rIgG_4.raw High KYGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 321 4.43 0.00 1 5 21 3 879.11639 2635.33463 -2.18 34.89 4066 4066 MS2 38/100 Linfeng_091311_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 477 4.41 0.00 0 2 25 3 487.59863 1460.78135 -2.04 42.64 5052 5052 MS2 30/48 Linfeng_091311_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 541 4.27 0.00 0 31 100 3 836.42407 2507.25766 4.89 45.51 5842 5842 MS2 32/96 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 487 4.21 0.00 0 3 25 3 487.60062 1460.78730 2.03 41.48 4373 4373 MS2 28/48 Linfeng_122411_rIgG_4.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 533 4.03 0.00 0 26 100 3 836.42395 2507.25730 4.75 45.61 5863 5863 MS2 29/96 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 434 3.92 0.00 0 5 25 2 730.89764 1460.78801 2.52 41.60 4434 4434 MS2 21/24 Linfeng_122411_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 442 3.88 0.00 0 3 19 2 730.89813 1460.78899 3.19 41.38 4360 4360 MS2 21/24 Linfeng_122411_rIgG_4.raw High AIDALREFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 320 3.62 0.00 1 13 25 3 793.41888 2378.24210 2.91 45.13 4835 4835 MS2 28/80 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 262 3.52 0.00 0 6 25 2 805.40656 1609.80583 3.84 45.06 4873 4873 MS2 20/24 Linfeng_122411_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 298 3.51 0.00 0 21 25 3 836.42126 2507.24924 1.54 37.04 3817 3817 MS2 34/96 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 344 3.40 0.00 0 32 25 2 869.93854 1738.86980 2.92 43.10 4576 4576 MS2 20/28 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 350 3.34 0.00 0 18 25 3 580.29474 1738.86966 2.84 43.06 4572 4572 MS2 31/56 Linfeng_122411_rIgG_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 482 3.16 0.00 0 6 25 2 730.89484 1460.78240 -1.32 42.76 5043 5043 MS2 21/24 Linfeng_091311_rIgG_6.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 229 3.15 0.00 0 21 25 2 805.40265 1609.79802 -1.01 46.11 5462 5462 MS2 20/24 Linfeng_091311_rIgG_6.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 432 3.11 0.00 0 11 25 2 730.89441 1460.78154 -1.91 42.52 5036 5036 MS2 21/24 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 260 3.10 0.00 0 3 25 2 805.40582 1609.80437 2.93 44.81 4794 4794 MS2 20/24 Linfeng_122411_rIgG_4.raw High LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 349 3.07 0.00 1 16 25 3 513.92316 1539.75492 -2.72 30.41 3483 3483 MS2 26/44 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 3.02 0.00 0 6 21 2 582.28241 1163.55754 1.81 35.39 3607 3607 MS2 15/18 Linfeng_122411_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 3.00 0.00 0 32 25 2 869.93451 1738.86174 -1.71 44.33 5264 5264 MS2 19/28 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 23 25 2 535.31720 1069.62712 1.76 26.39 2438 2438 MS2 16/18 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 13 15 2 805.40234 1609.79741 -1.39 46.04 5479 5479 MS2 20/24 Linfeng_091311_rIgG_4.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 334 2.91 0.00 0 19 25 3 580.29218 1738.86197 -1.58 44.35 5266 5266 MS2 32/56 Linfeng_091311_rIgG_4.raw High VTGLTEGLVDVILYHQPDDK Unambiguous 2 1 IPI00644055.3 CID 1.0000 0.0000 1 1 393 2.89 0.00 0 8 25 3 738.05359 2212.14621 -1.57 45.10 5361 5361 MS2 28/76 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw Medium LKDYAFVHFEDR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 347 2.75 0.00 1 9 14 4 385.69418 1539.75490 -2.73 30.39 3481 3481 MS2 29/66 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 431 2.71 0.00 1 8 25 3 430.21945 1288.64380 4.50 2.91 277 277 MS2 23/44 Linfeng_122411_rIgG_4.raw High ESDLSHVQNK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.70 0.00 0 21 25 2 578.78235 1156.55742 -1.65 14.89 1324 1324 MS2 13/18 Linfeng_091311_rIgG_4.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 446 2.70 0.00 0 12 100 2 582.28333 1163.55937 3.38 44.83 5695 5695 MS2 14/18 Linfeng_20120130_CHD1_4.raw High NLATTVTEEILEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 456 2.68 0.00 0 10 25 2 730.89496 1460.78264 -1.16 42.56 5046 5046 MS2 19/24 Linfeng_091311_rIgG_3.raw High GYAFITFcGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.68 0.00 0 6 24 2 582.28015 1163.55303 -2.07 36.47 4271 4271 MS2 15/18 Linfeng_091311_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High EFNEEGALSVLQQFK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 313 2.65 0.00 0 11 25 3 580.29211 1738.86179 -1.69 44.44 5252 5252 MS2 25/56 Linfeng_091311_rIgG_6.raw High KADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 220 2.60 0.00 1 32 25 3 408.19482 1222.56992 0.01 11.94 976 976 MS2 19/40 Linfeng_091311_rIgG_6.raw High YGGPPPDSVYSGVQPGIGTEVFVGK Unambiguous 5 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 293 2.59 0.00 0 33 25 3 836.41833 2507.24045 -1.97 38.14 4484 4484 MS2 27/96 Linfeng_091311_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 309 2.57 0.00 0 7 25 3 537.27313 1609.80484 3.23 44.89 4805 4805 MS2 32/48 Linfeng_122411_rIgG_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 422 2.56 0.00 1 7 25 3 446.56873 1337.69162 -2.36 31.81 3665 3665 MS2 22/40 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 250 2.43 0.00 0 48 25 2 805.40332 1609.79936 -0.18 45.94 5470 5470 MS2 18/24 Linfeng_091311_rIgG_3.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 457 2.41 0.00 0 30 100 2 464.25790 927.50853 4.10 42.48 5163 5163 MS2 11/14 Linfeng_20120130_CHD1_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.40 0.00 0 11 25 2 805.40601 1609.80474 3.16 44.94 4697 4697 MS2 16/24 Linfeng_122411_rIgG_3.raw High ADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 68 2.38 0.00 0 16 25 2 547.74078 1094.47429 -0.59 13.98 1197 1197 MS2 14/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 162 2.36 0.00 0 35 25 2 535.31470 1069.62212 -2.92 28.59 3238 3238 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLIEAGLPQK Unambiguous 4 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 175 2.35 0.00 0 36 25 2 535.31482 1069.62236 -2.69 28.83 3258 3258 MS2 15/18 Linfeng_091311_rIgG_6.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw High LmMDPLSGQNR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 M2(Oxidation) CID 1.0000 0.0000 1 1 322 2.21 0.00 0 29 100 2 639.30487 1277.60246 3.69 27.89 2219 2219 MS2 15/20 Linfeng_20120130_CHD1_4.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High VQESTKGPDEAK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 315 2.14 0.00 1 12 25 2 644.82178 1288.63628 -1.34 2.91 271 271 MS2 12/22 Linfeng_091311_rIgG_4.raw High KADGYNQPDSK Unambiguous 8 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 193 2.09 0.00 1 15 25 2 611.78748 1222.56767 -1.82 2.85 262 262 MS2 15/20 Linfeng_091311_rIgG_4.raw High STAYEDYYYHPPPR Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 83 2.04 0.00 0 7 25 2 879.89374 1758.78020 2.48 25.15 2271 2271 MS2 14/26 Linfeng_122411_rIgG_4.raw High DLYEDELVPLFEK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 266 2.03 0.00 0 34 25 2 805.40240 1609.79753 -1.32 46.19 5465 5465 MS2 17/24 Linfeng_091311_rIgG_7.raw High LcDSYEIRPGK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.02 0.00 0 27 25 2 669.32794 1337.64861 -2.44 23.40 2522 2522 MS2 15/20 Linfeng_091311_rIgG_4.raw High ENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 479 2.01 0.00 0 23 100 2 554.78174 1108.55620 3.67 46.31 6022 6022 MS2 12/16 Linfeng_20120130_CHD1_4.raw High TKENILEEFSK Unambiguous 6 2 IPI00012074.3;IPI00644055.3 CID 1.0000 0.0000 1 1 458 2.01 0.00 1 18 25 2 669.35229 1337.69731 1.89 30.55 2987 2987 MS2 15/20 Linfeng_122411_rIgG_4.raw High LFVGSIPK Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00217975.4 Lamin-B1 36.01 2 17 18 29 45.80 30.20 14 15 18.20 16.72 6 6 24.45 8.53 4 8 586 66.4 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SLEGDLEDLKDQIAQLEASLAAAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 336 6.08 0.00 1 28 25 3 843.44440 2528.31864 3.76 54.53 6469 6469 MS2 38/92 Linfeng_091311_rIgG_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 116 5.78 0.00 0 7 25 4 853.64703 3411.56630 -1.44 44.54 5291 5291 MS2 55/174 Linfeng_091311_rIgG_4.raw High TTIPEEEEEEEEAAGVVVEEELFHQQGTPR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 123 5.41 0.00 0 13 25 4 853.65070 3411.58095 2.86 43.45 4621 4621 MS2 51/174 Linfeng_122411_rIgG_4.raw High SLETENSALQLQVTER Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 582 4.57 0.00 0 0 100 2 909.46936 1817.93144 4.08 36.30 3965 3965 MS2 21/30 Linfeng_20120130_CHD1_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 407 3.90 0.00 0 43 25 2 723.89209 1446.77690 -2.07 32.95 3817 3817 MS2 21/24 Linfeng_091311_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 457 3.86 0.00 0 7 25 3 482.93018 1446.77597 -2.71 32.99 3822 3822 MS2 26/48 Linfeng_091311_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 546 3.48 0.00 0 52 100 2 626.31696 1251.62663 4.01 31.59 2951 2951 MS2 16/20 Linfeng_20120130_CHD1_4.raw High SLETENSALQLQVTEREEVR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 355 3.14 0.00 1 8 25 3 777.73328 2331.18528 2.79 30.57 2989 2989 MS2 22/76 Linfeng_122411_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 549 3.12 0.00 0 29 100 2 626.31689 1251.62651 3.92 31.51 2936 2936 MS2 15/20 Linfeng_20120130_CHD1_4.raw High NQNSWGTGEDVK Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 90 3.02 0.00 0 11 25 2 667.80029 1334.59331 -2.91 22.36 2376 2376 MS2 16/22 Linfeng_091311_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 534 2.85 0.00 0 56 100 2 626.31720 1251.62712 4.40 31.64 2963 2963 MS2 15/20 Linfeng_20120130_CHD1_4.raw High DAALATALGDKK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 519 2.77 0.00 1 25 25 2 587.32556 1173.64385 -3.07 25.12 2763 2763 MS2 17/22 Linfeng_091311_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 525 2.73 0.00 0 42 100 2 626.31677 1251.62627 3.72 31.00 2831 2831 MS2 15/20 Linfeng_20120130_CHD1_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 555 2.72 0.00 0 46 100 2 723.89563 1446.78398 2.82 39.01 4480 4480 MS2 20/24 Linfeng_20120130_CHD1_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 534 2.68 0.00 0 28 100 2 626.31628 1251.62529 2.94 31.10 2852 2852 MS2 15/20 Linfeng_20120130_CHD1_4.raw High cQSLTEDLEFRK Unambiguous 2 1 IPI00217975.4 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 2.66 0.00 1 24 25 3 509.24927 1525.73325 1.09 28.42 2706 2706 MS2 26/44 Linfeng_122411_rIgG_4.raw High AEHDQLLLNYAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 384 2.62 0.00 0 21 25 3 472.24792 1414.72922 -2.35 29.28 3330 3330 MS2 26/44 Linfeng_091311_rIgG_4.raw High LSSEMNTSTVNSAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 143 2.48 0.00 0 8 25 2 748.85114 1496.69499 -4.02 21.97 2322 2322 MS2 16/26 Linfeng_091311_rIgG_4.raw Medium IQELEDLLAKEK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 394 2.47 0.00 1 10 25 3 476.93732 1428.79740 2.02 33.05 3311 3311 MS2 24/44 Linfeng_122411_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 351 2.45 0.00 0 32 25 2 626.31610 1251.62493 2.65 27.91 2638 2638 MS2 17/20 Linfeng_122411_rIgG_4.raw High IQELEDLLAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 455 2.44 0.00 0 15 25 2 586.33008 1171.65288 -3.47 37.01 4340 4340 MS2 16/18 Linfeng_091311_rIgG_4.raw High ALYETELADAR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 312 2.30 0.00 0 7 25 2 626.31293 1251.61858 -2.42 29.55 3366 3366 MS2 17/20 Linfeng_091311_rIgG_4.raw High IQELEDLLAK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 535 2.29 0.00 0 20 100 2 586.33466 1171.66203 4.35 45.30 5797 5797 MS2 15/18 Linfeng_20120130_CHD1_4.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw High IGDTSVSYK Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 180 2.16 0.00 0 4 25 2 485.24658 969.48589 -2.98 20.91 2176 2176 MS2 13/16 Linfeng_091311_rIgG_4.raw High AGGPTTPLSPTR Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 381 2.09 0.00 0 26 25 2 577.81049 1154.61370 -2.40 22.71 2425 2425 MS2 14/22 Linfeng_091311_rIgG_4.raw High IESLSSQLSNLQK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 440 2.08 0.00 0 23 25 2 723.89563 1446.78398 2.82 31.87 3159 3159 MS2 17/24 Linfeng_122411_rIgG_4.raw High NSQGEEVAQR Unambiguous 1 1 IPI00217975.4 CID 1.0000 0.0000 1 1 170 2.07 0.00 0 41 25 2 559.26501 1117.52275 -0.48 12.63 1030 1030 MS2 14/18 Linfeng_091311_rIgG_4.raw High DAALATALGDK Unambiguous 2 1 IPI00217975.4 CID 1.0000 0.0000 1 1 486 2.01 0.00 0 48 25 2 523.27820 1045.54912 -3.21 29.18 3317 3317 MS2 17/20 Linfeng_091311_rIgG_4.raw IPI00903112.1 "cDNA FLJ36533 fis, clone TRACH2004428, highly similar to Lactotransferrin (Fragment)" 35.15 6 1 19 21 69.66 35.15 19 21 697 76.7 8.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 374 5.39 0.00 0 10 15 3 696.69568 2088.07248 -1.73 45.99 5603 5603 MS2 40/72 Linfeng_091311_rIgG_10.raw High DSPIQcIQAIAENR Unambiguous 8 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 5.11 0.00 0 15 25 3 538.93390 1614.78714 -2.08 41.52 5038 5038 MS2 32/52 Linfeng_091311_rIgG_10.raw High SQQSSDPDPNcVDRPVEGYLAVAVVR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 4.98 0.00 0 4 22 3 953.45874 2858.36167 -4.27 36.43 4386 4386 MS2 37/100 Linfeng_091311_rIgG_10.raw High IDSGLYLGSGYFTAIQNLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 334 4.76 0.00 0 12 25 2 1044.54004 2088.07280 -1.58 46.00 5605 5605 MS2 25/36 Linfeng_091311_rIgG_10.raw High SNLcALcIGDEQGENK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 4.04 0.00 0 17 25 2 904.39893 1807.79057 -2.45 30.45 3595 3595 MS2 22/30 Linfeng_091311_rIgG_10.raw High FDEYFSQScAPGSDPR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 15 3.80 0.00 0 4 25 2 931.88385 1862.76042 -2.50 30.44 3594 3594 MS2 22/30 Linfeng_091311_rIgG_10.raw High KGGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 465 3.78 0.00 1 11 25 3 506.94531 1518.82138 -4.05 32.07 3813 3813 MS2 24/52 Linfeng_091311_rIgG_10.raw High SVQWcAVSQPEATK Unambiguous 5 1 IPI00903112.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 3.43 0.00 0 5 25 2 795.88135 1590.75542 -1.71 28.40 3313 3313 MS2 19/26 Linfeng_091311_rIgG_10.raw High LADFALLcLDGK Unambiguous 3 2 IPI00789477.1;IPI00903112.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.39 0.00 0 32 25 2 668.35144 1335.69560 -1.63 41.80 5074 5074 MS2 19/22 Linfeng_091311_rIgG_10.raw High THYYAVAVVK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 382 2.91 0.00 0 13 25 3 384.21240 1150.62265 -2.51 23.99 2692 2692 MS2 21/36 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 450 2.85 0.00 0 6 25 3 487.59842 1460.78070 -3.40 24.80 2808 2808 MS2 26/48 Linfeng_091311_rIgG_10.raw High DGAGDVAFIR Unambiguous 5 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 359 2.82 0.00 0 39 25 2 510.75729 1020.50731 -3.57 31.03 3673 3673 MS2 15/18 Linfeng_091311_rIgG_10.raw High NLLFNDNTEcLAR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 221 2.79 0.00 0 15 25 2 790.37579 1579.74431 -5.74 35.26 4233 4233 MS2 20/24 Linfeng_091311_rIgG_10.raw High LRPVAAEVYGTER Unambiguous 8 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 396 2.66 0.00 0 8 25 2 730.89404 1460.78081 -3.33 24.88 2819 2819 MS2 18/24 Linfeng_091311_rIgG_10.raw High cLAENAGDVAFVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.65 0.00 0 5 25 2 697.33984 1393.67241 -4.09 30.74 3633 3633 MS2 20/24 Linfeng_091311_rIgG_10.raw High VVWcAVGEQELR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.52 0.00 0 15 25 2 723.36212 1445.71697 -2.54 33.46 3995 3995 MS2 18/22 Linfeng_091311_rIgG_10.raw High GGSFQLNELQGLK Unambiguous 7 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 398 2.51 0.00 0 24 25 2 695.86725 1390.72722 -3.85 35.77 4300 4300 MS2 16/24 Linfeng_091311_rIgG_10.raw High SDTSLTWNSVK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 254 2.46 0.00 0 7 25 2 619.30457 1237.60185 -3.31 29.40 3451 3451 MS2 18/20 Linfeng_091311_rIgG_10.raw High EDAIWNLLR Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 401 2.29 0.00 0 37 25 2 565.30280 1129.59831 -1.57 43.57 5297 5297 MS2 15/16 Linfeng_091311_rIgG_10.raw High FQLFGSPSGQK Unambiguous 4 2 IPI00789477.1;IPI00903112.1 CID 1.0000 0.0000 1 1 323 2.29 0.00 0 4 16 2 598.30554 1195.60381 -5.72 33.73 4031 4031 MS2 15/20 Linfeng_091311_rIgG_10.raw High FFSAScVPGADK Unambiguous 5 2 IPI00789477.1;IPI00903112.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 2.20 0.00 0 4 25 2 643.29626 1285.58525 -2.30 29.21 3425 3425 MS2 19/22 Linfeng_091311_rIgG_10.raw IPI00298788.4 Isoform 1 of Interleukin enhancer-binding factor 3 34.68 7 22 22 44 43.88 21.25 14 16 31.45 8.61 8 10 57.72 18.12 9 18 894 95.3 8.76 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VADNLAIQLAAVTEDKYEILQSVDDAAIVIK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 189 5.33 0.00 1 32 77 3 1110.26917 3328.79294 1.25 55.15 6463 6463 MS2 35/120 Linfeng_20120130_CHD1_3.raw High LVSQTGPVHAPIFTmSVEVDGNSFEASGPSK Unambiguous 6 1 IPI00298788.4 M15(Oxidation) CID 1.0000 0.0000 1 1 455 5.26 0.00 0 0 100 3 1068.85962 3204.56430 3.86 44.96 4903 4903 MS2 35/120 Linfeng_20120130_CHD1_3.raw High LVSQTGPVHAPIFTmSVEVDGNSFEASGPSK Unambiguous 6 1 IPI00298788.4 M15(Oxidation) CID 1.0000 0.0000 1 1 462 4.41 0.00 0 0 100 3 1068.86108 3204.56870 5.23 45.13 4941 4941 MS2 30/120 Linfeng_20120130_CHD1_3.raw High AYAALAALEKLFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 196 4.30 0.00 1 10 25 3 806.11206 2416.32163 3.84 49.90 5331 5331 MS2 35/88 Linfeng_122411_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 280 4.27 0.00 0 5 25 2 955.49835 1909.98943 1.45 34.79 3390 3390 MS2 22/34 Linfeng_122411_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 302 4.21 0.00 0 5 25 2 955.49426 1909.98125 -2.83 35.76 4188 4188 MS2 22/34 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 461 4.12 0.00 0 5 100 2 955.50195 1909.99663 5.22 41.90 5052 5052 MS2 18/34 Linfeng_20120130_CHD1_4.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 423 3.99 0.00 0 3 100 2 955.50061 1909.99394 3.82 41.56 4245 4245 MS2 17/34 Linfeng_20120130_CHD1_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 369 3.95 0.00 0 37 25 3 637.33179 1909.98081 -3.06 35.78 4191 4191 MS2 34/68 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 344 3.94 0.00 0 38 25 3 637.33472 1909.98960 1.54 34.76 3386 3386 MS2 33/68 Linfeng_122411_rIgG_3.raw High NENPVDYTVQIPPSTTYAITPmK Unambiguous 7 1 IPI00298788.4 M22(Oxidation) CID 1.0000 0.0000 1 1 536 3.75 0.00 0 0 100 3 865.76318 2595.27500 3.93 42.16 4337 4337 MS2 27/88 Linfeng_20120130_CHD1_3.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 327 3.56 0.00 0 8 25 2 722.36823 1443.72917 2.11 29.65 2724 2724 MS2 23/26 Linfeng_122411_rIgG_3.raw High NTKEPPLSLTIHLTSPVVR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 154 3.50 0.00 1 13 25 4 526.30255 2102.18838 -4.06 34.18 3983 3983 MS2 39/108 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 539 3.24 0.00 0 23 100 3 637.33551 1909.99198 2.79 41.89 4292 4292 MS2 23/68 Linfeng_20120130_CHD1_3.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 510 3.23 0.00 0 0 100 2 722.36981 1443.73235 4.31 33.65 2752 2752 MS2 19/26 Linfeng_20120130_CHD1_3.raw High KQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGK Unambiguous 2 1 IPI00298788.4 CID 1.0000 0.0000 1 1 57 3.13 0.00 1 2 25 5 882.40710 4408.00642 -1.98 21.86 2315 2315 MS2 46/312 Linfeng_091311_rIgG_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 257 2.99 0.00 0 10 24 2 510.79016 1020.57305 0.56 30.90 2888 2888 MS2 17/18 Linfeng_122411_rIgG_3.raw High VLQDMGLPTGAEGR Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 332 2.99 0.00 0 13 25 2 722.36487 1443.72246 -2.54 31.12 3583 3583 MS2 19/26 Linfeng_091311_rIgG_3.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 357 2.94 0.00 0 10 100 2 660.31171 1319.61614 3.55 33.52 2724 2724 MS2 16/20 Linfeng_20120130_CHD1_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 373 2.93 0.00 0 20 25 2 510.79086 1020.57445 1.94 30.82 3022 3022 MS2 17/18 Linfeng_122411_rIgG_4.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 268 2.89 0.00 0 11 25 2 510.78827 1020.56926 -3.15 32.18 3724 3724 MS2 17/18 Linfeng_091311_rIgG_3.raw High FVMEVEVDGQK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 509 2.75 0.00 0 22 100 2 640.81561 1280.62395 3.72 36.22 3258 3258 MS2 17/20 Linfeng_20120130_CHD1_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 267 2.71 0.00 0 26 25 2 510.78802 1020.56877 -3.62 32.33 3734 3734 MS2 17/18 Linfeng_091311_rIgG_4.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 351 2.69 0.00 0 38 100 2 660.31152 1319.61577 3.27 32.52 2534 2534 MS2 16/20 Linfeng_20120130_CHD1_3.raw High FVMEVEVDGQK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 498 2.63 0.00 0 10 100 2 640.81537 1280.62346 3.33 36.50 3310 3310 MS2 15/20 Linfeng_20120130_CHD1_3.raw High LNQLKPGLQYK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 281 2.59 0.00 0 9 25 2 651.38062 1301.75395 -2.83 24.00 2612 2612 MS2 14/20 Linfeng_091311_rIgG_3.raw High GWPLELLcEK Unambiguous 7 1 IPI00298788.4 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 401 2.54 0.00 0 21 25 2 622.81989 1244.63249 -1.56 42.59 5049 5049 MS2 14/18 Linfeng_091311_rIgG_3.raw High VLAGETLSVNDPPDVLDRQK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 353 2.51 0.00 1 14 22 3 722.71997 2166.14536 2.38 31.59 2978 2978 MS2 28/76 Linfeng_122411_rIgG_3.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 214 2.50 0.00 0 2 25 2 660.30981 1319.61235 0.68 30.20 2797 2797 MS2 16/20 Linfeng_122411_rIgG_3.raw High FVMEVEVDGQK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 499 2.41 0.00 0 52 100 2 640.81555 1280.62383 3.62 35.15 3038 3038 MS2 15/20 Linfeng_20120130_CHD1_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 502 2.40 0.00 0 36 100 2 510.79156 1020.57585 3.31 38.04 4293 4293 MS2 15/18 Linfeng_20120130_CHD1_4.raw High EATDAIGHLDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 245 2.34 0.00 0 10 25 2 599.29486 1197.58245 -2.89 23.25 2506 2506 MS2 15/20 Linfeng_091311_rIgG_3.raw High cLAALASLR Unambiguous 7 1 IPI00298788.4 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 638 2.32 0.00 0 9 25 2 487.77695 974.54662 1.44 31.78 3002 3002 MS2 16/16 Linfeng_122411_rIgG_3.raw High AVSDWIDEQEK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 182 2.32 0.00 0 11 25 2 660.30798 1319.60869 -2.09 31.55 3640 3640 MS2 16/20 Linfeng_091311_rIgG_3.raw High FVMEVEVDGQK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 502 2.29 0.00 0 40 100 2 640.81622 1280.62517 4.67 35.20 3047 3047 MS2 13/20 Linfeng_20120130_CHD1_3.raw High FNYSGSGGR Unambiguous 2 1 IPI00298788.4 CID 1.0000 0.0000 1 1 64 2.28 0.00 0 10 25 2 472.71350 944.41973 -2.52 19.19 1944 1944 MS2 12/16 Linfeng_091311_rIgG_3.raw High GDLDLELVLLcK Unambiguous 7 1 IPI00298788.4 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.20 0.00 0 36 25 2 694.37732 1387.74736 -2.05 44.86 5335 5335 MS2 17/22 Linfeng_091311_rIgG_3.raw High NPVMELNEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 235 2.18 0.00 0 40 25 2 537.26691 1073.52654 -2.88 25.18 2778 2778 MS2 13/16 Linfeng_091311_rIgG_3.raw High AYAALAALEK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 463 2.14 0.00 0 46 100 2 510.79172 1020.57616 3.61 37.73 3551 3551 MS2 16/18 Linfeng_20120130_CHD1_3.raw High LFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 403 2.12 0.00 0 15 25 2 707.88397 1414.76067 2.08 36.36 3589 3589 MS2 18/24 Linfeng_122411_rIgG_3.raw High LFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 518 2.08 0.00 0 20 100 2 707.88562 1414.76396 4.41 46.02 5137 5137 MS2 14/24 Linfeng_20120130_CHD1_3.raw High LFPDTPLALDANK Unambiguous 6 1 IPI00298788.4 CID 1.0000 0.0000 1 1 575 2.05 0.00 0 26 100 2 707.88580 1414.76433 4.66 45.58 5036 5036 MS2 15/24 Linfeng_20120130_CHD1_3.raw High IFVNDDR Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 272 2.05 0.00 0 12 25 2 439.72098 878.43468 -2.30 22.42 2390 2390 MS2 11/12 Linfeng_091311_rIgG_3.raw High LAAFGQLHK Unambiguous 7 1 IPI00298788.4 CID 1.0000 0.0000 1 1 340 2.01 0.00 0 8 25 2 492.78403 984.56078 -1.82 24.91 2739 2739 MS2 12/16 Linfeng_091311_rIgG_3.raw IPI00844578.1 ATP-dependent RNA helicase A 34.49 1 40 40 157 232.41 28.90 32 78 159.58 28.11 29 49 101.73 13.46 12 30 1270 140.9 6.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.98 0.00 1 0 25 3 1015.72723 3045.16715 2.54 29.32 2681 2681 MS2 45/104 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 362 5.52 0.00 0 8 25 3 684.01532 2050.03141 3.57 44.91 4693 4693 MS2 33/64 Linfeng_122411_rIgG_3.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.46 0.00 1 3 25 3 1015.72156 3045.15012 -3.05 30.21 3463 3463 MS2 44/104 Linfeng_091311_rIgG_3.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 6 5.27 0.00 1 3 25 3 1015.72144 3045.14975 -3.17 30.39 3526 3526 MS2 43/104 Linfeng_091311_rIgG_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 11 5.17 0.00 1 5 100 3 1015.72913 3045.17282 4.41 30.69 2363 2363 MS2 35/104 Linfeng_20120130_CHD1_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 11 5.15 0.00 1 0 100 3 1015.72833 3045.17044 3.62 30.56 2340 2340 MS2 31/104 Linfeng_20120130_CHD1_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 176 5.05 0.00 0 0 100 2 1081.99487 2162.98247 3.98 35.64 3264 3264 MS2 24/40 Linfeng_20120130_CHD1_2.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 340 4.66 0.00 0 34 25 3 684.01227 2050.02225 -0.89 45.98 5545 5545 MS2 32/64 Linfeng_091311_rIgG_2.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 331 4.58 0.00 0 12 25 3 684.01196 2050.02134 -1.34 46.18 5497 5497 MS2 30/64 Linfeng_091311_rIgG_4.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 331 4.53 0.00 0 23 25 3 684.01410 2050.02774 1.79 44.85 4800 4800 MS2 33/64 Linfeng_122411_rIgG_4.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 330 4.50 0.00 0 10 25 3 684.01202 2050.02152 -1.25 46.03 5481 5481 MS2 33/64 Linfeng_091311_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 305 4.45 0.00 0 3 25 2 1025.51855 2050.02983 2.81 45.00 4704 4704 MS2 23/32 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 312 4.38 0.00 0 24 25 3 683.03955 2047.10410 -1.46 48.02 5804 5804 MS2 34/68 Linfeng_091311_rIgG_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 84 4.37 0.00 0 4 24 2 1081.98596 2162.96465 -4.26 32.42 3795 3795 MS2 24/40 Linfeng_091311_rIgG_2.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 4.34 0.00 0 5 25 3 683.04254 2047.11307 2.92 46.97 4958 4958 MS2 31/68 Linfeng_122411_rIgG_3.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 85 4.32 0.00 0 2 25 2 1081.99255 2162.97783 1.84 31.29 2940 2940 MS2 25/40 Linfeng_122411_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 361 4.31 0.00 0 14 25 3 581.29260 1741.86325 1.65 36.37 3590 3590 MS2 37/60 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 277 4.30 0.00 0 11 25 2 1025.51501 2050.02275 -0.65 46.12 5492 5492 MS2 23/32 Linfeng_091311_rIgG_3.raw High PSAAGINLMIGSTR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 562 4.25 0.00 0 19 100 2 694.37482 1387.74236 4.37 41.63 4570 4570 MS2 21/26 Linfeng_20120130_CHD1_2.raw High DKDDDGGEDDDANcNLIcGDEYGPETR Unambiguous 1 1 IPI00844578.1 C14(Carbamidomethyl); C18(Carbamidomethyl) CID 1.0000 0.0000 1 1 10 4.23 0.00 1 2 100 3 1015.72852 3045.17099 3.80 30.51 2333 2333 MS2 33/104 Linfeng_20120130_CHD1_2.raw High PSAAGINLmIGSTR Unambiguous 1 1 IPI00844578.1 M9(Oxidation) CID 1.0000 0.0000 1 1 583 4.21 0.00 0 11 100 2 702.37177 1403.73625 3.60 35.53 3237 3237 MS2 21/26 Linfeng_20120130_CHD1_2.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 4.18 0.00 1 15 25 3 725.73749 2175.19791 -1.91 44.83 5331 5331 MS2 34/72 Linfeng_091311_rIgG_3.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 343 4.12 0.00 0 3 25 3 693.01178 2077.02079 3.33 46.00 4834 4834 MS2 28/68 Linfeng_122411_rIgG_3.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 282 4.09 0.00 0 11 25 2 1025.51489 2050.02251 -0.77 46.03 5551 5551 MS2 23/32 Linfeng_091311_rIgG_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 351 4.05 0.00 0 10 25 3 693.01135 2077.01950 2.72 46.08 4848 4848 MS2 27/68 Linfeng_122411_rIgG_2.raw High TTQVPQFILDDFIQNDRAAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 247 4.05 0.00 1 11 25 4 847.93207 3388.70644 3.21 43.97 4572 4572 MS2 34/168 Linfeng_122411_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 470 4.04 0.00 0 38 100 2 871.43286 1741.85845 -1.11 43.52 5025 5025 MS2 20/30 Linfeng_20120130_CHD1_2.raw High PSAAGINLMIGSTR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 623 4.02 0.00 0 13 100 2 694.37494 1387.74260 4.55 41.70 4585 4585 MS2 21/26 Linfeng_20120130_CHD1_2.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 203 4.01 0.00 0 4 100 2 1081.99597 2162.98467 5.00 36.12 3376 3376 MS2 21/40 Linfeng_20120130_CHD1_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 367 3.91 0.00 0 8 25 3 693.01202 2077.02152 3.69 45.79 4918 4918 MS2 28/68 Linfeng_122411_rIgG_4.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 319 3.89 0.00 0 22 25 3 693.00885 2077.01200 -0.90 46.82 5580 5580 MS2 28/68 Linfeng_091311_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 229 3.81 0.00 1 9 25 3 725.73657 2175.19516 -3.17 44.87 5403 5403 MS2 32/72 Linfeng_091311_rIgG_2.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 173 3.72 0.00 0 5 25 3 407.91217 1221.72196 1.44 29.93 2793 2793 MS2 26/40 Linfeng_122411_rIgG_2.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 3.69 0.00 1 12 25 3 725.73712 2175.19681 -2.41 44.95 5342 5342 MS2 32/72 Linfeng_091311_rIgG_4.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 173 3.67 0.00 0 4 9 3 407.91232 1221.72242 1.81 29.89 2756 2756 MS2 29/40 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 430 3.65 0.00 0 24 25 3 501.93399 1503.78742 -2.70 27.71 3160 3160 MS2 30/48 Linfeng_091311_rIgG_2.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 198 3.63 0.00 1 12 25 3 725.74115 2175.20890 3.14 44.15 4594 4594 MS2 31/72 Linfeng_122411_rIgG_3.raw High GMTLVTPLQLLLFASK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 92 3.55 0.00 0 34 25 3 578.00946 1732.01383 3.46 54.30 5857 5857 MS2 27/60 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 3.55 0.00 0 22 25 3 683.04248 2047.11289 2.83 46.73 5036 5036 MS2 31/68 Linfeng_122411_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 3.54 0.00 0 8 23 3 547.29199 1639.86142 1.77 29.50 2704 2704 MS2 32/56 Linfeng_122411_rIgG_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 250 3.51 0.00 0 22 25 3 473.27457 1417.80915 2.92 51.30 5505 5505 MS2 26/44 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 306 3.50 0.00 0 22 25 3 683.04034 2047.10648 -0.30 47.92 5718 5718 MS2 30/68 Linfeng_091311_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 266 3.49 0.00 0 11 11 2 871.43024 1741.85320 -4.12 37.45 4453 4453 MS2 21/30 Linfeng_091311_rIgG_2.raw High PSAAGINLmIGSTR Unambiguous 1 1 IPI00844578.1 M9(Oxidation) CID 1.0000 0.0000 1 1 590 3.49 0.00 0 14 100 2 702.37207 1403.73686 4.03 36.07 3365 3365 MS2 20/26 Linfeng_20120130_CHD1_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 296 3.47 0.00 0 46 25 3 693.00732 2077.00742 -3.10 47.13 5579 5579 MS2 27/68 Linfeng_091311_rIgG_5.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 443 3.46 0.00 0 40 25 3 501.93445 1503.78879 -1.79 27.64 3114 3114 MS2 28/48 Linfeng_091311_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 190 3.46 0.00 0 13 25 3 407.91025 1221.71619 -3.28 31.00 3606 3606 MS2 27/40 Linfeng_091311_rIgG_2.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 183 3.46 0.00 0 29 100 3 407.91318 1221.72498 3.91 42.51 4777 4777 MS2 23/40 Linfeng_20120130_CHD1_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 311 3.45 0.00 0 36 25 3 693.00922 2077.01310 -0.37 46.94 5592 5592 MS2 27/68 Linfeng_091311_rIgG_4.raw High AAmEALVVEVTK Unambiguous 1 1 IPI00844578.1 M3(Oxidation) CID 1.0000 0.0000 1 1 602 3.43 0.00 0 11 100 2 638.84717 1276.68706 4.12 31.16 2441 2441 MS2 18/22 Linfeng_20120130_CHD1_2.raw High TTQVPQFILDDFIQNDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 273 3.42 0.00 0 21 25 2 1025.51501 2050.02275 -0.65 46.24 5504 5504 MS2 22/32 Linfeng_091311_rIgG_4.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.41 0.00 0 23 25 3 547.28955 1639.85410 -2.70 30.38 3486 3486 MS2 28/56 Linfeng_091311_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 469 3.36 0.00 0 40 25 3 501.93652 1503.79502 2.35 26.01 2243 2243 MS2 26/48 Linfeng_122411_rIgG_3.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 392 3.34 0.00 0 20 25 2 857.95636 1714.90544 2.53 40.77 4156 4156 MS2 22/28 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 157 3.33 0.00 0 9 25 3 407.91248 1221.72287 2.19 29.93 2907 2907 MS2 26/40 Linfeng_122411_rIgG_4.raw High PSAAGINLmIGSTR Unambiguous 1 1 IPI00844578.1 M9(Oxidation) CID 1.0000 0.0000 1 1 614 3.32 0.00 0 26 100 2 702.37189 1403.73650 3.77 35.74 3163 3163 MS2 17/26 Linfeng_20120130_CHD1_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 478 3.28 0.00 0 0 100 2 871.43817 1741.86907 4.99 43.51 4572 4572 MS2 18/30 Linfeng_20120130_CHD1_3.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 428 3.28 0.00 0 19 25 3 572.30444 1714.89878 -1.36 41.74 5006 5006 MS2 26/56 Linfeng_091311_rIgG_2.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 3.27 0.00 0 9 21 3 547.28937 1639.85355 -3.03 30.46 3535 3535 MS2 30/56 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 428 3.26 0.00 0 24 25 3 593.32037 1777.94657 -1.01 34.23 3318 3318 MS2 27/60 Linfeng_122411_rIgG_3.raw High FESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 311 3.22 0.00 0 66 25 3 683.03986 2047.10501 -1.01 48.12 5742 5742 MS2 32/68 Linfeng_091311_rIgG_4.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 628 3.22 0.00 0 41 100 3 501.93729 1503.79731 3.87 41.87 4626 4626 MS2 25/48 Linfeng_20120130_CHD1_2.raw High FSDHVALLSVFQAWDDAR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 298 3.22 0.00 0 54 25 3 693.00763 2077.00833 -2.66 46.79 5648 5648 MS2 27/68 Linfeng_091311_rIgG_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 527 3.21 0.00 0 46 100 2 644.85724 1288.70720 2.29 37.04 3415 3415 MS2 15/22 Linfeng_20120130_CHD1_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 498 3.20 0.00 0 17 100 2 871.43671 1741.86614 3.30 43.57 4586 4586 MS2 19/30 Linfeng_20120130_CHD1_3.raw High VQSDGQIVLVDDWIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 424 3.20 0.00 0 34 25 3 572.30676 1714.90573 2.70 40.78 4157 4157 MS2 27/56 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 459 3.19 0.00 0 48 25 3 501.93411 1503.78778 -2.46 27.78 3127 3127 MS2 25/48 Linfeng_091311_rIgG_4.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 3.16 0.00 0 1 20 2 679.34595 1357.68462 -3.47 24.33 2692 2692 MS2 18/22 Linfeng_091311_rIgG_2.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 413 3.15 0.00 0 23 25 2 644.85706 1288.70683 2.01 30.10 2785 2785 MS2 20/22 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 428 3.11 0.00 0 19 25 3 453.23288 1357.68409 -3.86 24.44 2708 2708 MS2 23/44 Linfeng_091311_rIgG_2.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 491 3.11 0.00 0 33 100 2 871.43604 1741.86479 2.53 43.96 5134 5134 MS2 17/30 Linfeng_20120130_CHD1_2.raw High VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 243 3.09 0.00 0 24 25 4 384.68869 1535.73293 -1.93 28.62 3248 3248 MS2 28/66 Linfeng_091311_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 184 3.09 0.00 1 14 25 3 725.74231 2175.21238 4.74 44.00 4692 4692 MS2 26/72 Linfeng_122411_rIgG_4.raw High GMTLVTPLQLLLFASK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 77 3.07 0.00 0 18 25 2 866.51025 1732.01323 3.12 54.25 5851 5851 MS2 21/30 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 3.06 0.00 0 1 12 2 679.34772 1357.68816 -0.86 3.69 376 376 MS2 18/22 Linfeng_122411_rIgG_3.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 440 3.04 0.00 0 31 25 3 501.93680 1503.79584 2.90 24.87 2092 2092 MS2 27/48 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 3.00 0.00 0 11 24 2 644.85425 1288.70122 -2.35 31.53 3677 3677 MS2 20/22 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 432 2.99 0.00 0 34 25 3 593.31781 1777.93888 -5.33 34.95 4082 4082 MS2 29/60 Linfeng_091311_rIgG_3.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 2.99 0.00 0 19 25 3 547.28961 1639.85428 -2.59 30.51 3496 3496 MS2 27/56 Linfeng_091311_rIgG_4.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 118 2.99 0.00 0 3 25 3 721.66418 2162.97800 1.92 31.17 2925 2925 MS2 37/80 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 194 2.98 0.00 0 13 25 3 407.91043 1221.71674 -2.83 31.10 3573 3573 MS2 24/40 Linfeng_091311_rIgG_4.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 427 2.93 0.00 0 3 11 2 701.89569 1402.78411 0.87 55.41 7091 7091 MS2 18/22 Linfeng_20120130_CHD1_2.raw High KLAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 271 2.92 0.00 1 40 25 3 472.93903 1416.80252 2.34 25.37 2158 2158 MS2 27/48 Linfeng_122411_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 195 2.90 0.00 0 15 20 3 407.91055 1221.71711 -2.53 31.05 3574 3574 MS2 28/40 Linfeng_091311_rIgG_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 282 2.90 0.00 0 28 25 2 871.43170 1741.85613 -2.44 37.39 4395 4395 MS2 21/30 Linfeng_091311_rIgG_3.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 185 2.90 0.00 0 39 100 3 407.91296 1221.72434 3.39 42.38 4746 4746 MS2 19/40 Linfeng_20120130_CHD1_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 309 2.88 0.00 0 6 100 2 502.30182 1003.59636 2.80 44.79 5337 5337 MS2 15/18 Linfeng_20120130_CHD1_2.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 300 2.87 0.00 0 22 25 2 871.43146 1741.85564 -2.72 37.53 4406 4406 MS2 21/30 Linfeng_091311_rIgG_4.raw Medium VRPGFcFHLcSR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 265 2.86 0.00 0 30 25 4 384.69016 1535.73879 1.88 27.56 2449 2449 MS2 29/66 Linfeng_122411_rIgG_3.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 323 2.85 0.00 0 4 25 2 679.34631 1357.68535 -2.93 24.35 2661 2661 MS2 18/22 Linfeng_091311_rIgG_3.raw High AENNSEVGASGYGVPGPTWDR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 99 2.84 0.00 0 10 19 3 721.65918 2162.96299 -5.02 32.41 3794 3794 MS2 34/80 Linfeng_091311_rIgG_2.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 584 2.82 0.00 0 18 25 2 588.30853 1175.60979 3.60 21.35 1685 1685 MS2 15/18 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 492 2.81 0.00 0 3 25 2 644.85394 1288.70061 -2.82 31.57 3643 3643 MS2 18/22 Linfeng_091311_rIgG_3.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 509 2.80 0.00 0 45 100 3 547.29291 1639.86417 3.44 39.30 4048 4048 MS2 25/56 Linfeng_20120130_CHD1_2.raw High LQISHEAAAcITGLR Unambiguous 1 1 IPI00844578.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 2.80 0.00 0 26 100 3 547.29321 1639.86509 4.00 39.38 4066 4066 MS2 26/56 Linfeng_20120130_CHD1_2.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 580 2.75 0.00 1 13 25 2 544.31329 1087.61931 -2.37 19.91 2071 2071 MS2 18/18 Linfeng_091311_rIgG_2.raw High QLYHLGVVEAYSGLTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 439 2.74 0.00 0 23 11 3 593.31799 1777.93943 -5.03 35.00 4133 4133 MS2 28/60 Linfeng_091311_rIgG_2.raw High KKEGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 385 2.73 0.00 2 43 25 3 436.56525 1307.68119 -2.31 14.42 1298 1298 MS2 21/40 Linfeng_091311_rIgG_2.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 591 2.73 0.00 1 40 25 2 544.31366 1087.62004 -1.70 19.90 2045 2045 MS2 16/18 Linfeng_091311_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 464 2.71 0.00 0 5 57 2 701.89600 1402.78472 1.31 55.41 6541 6541 MS2 15/22 Linfeng_20120130_CHD1_3.raw High ELDALDANDELTPLGR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 480 2.68 0.00 0 40 100 2 871.43604 1741.86479 2.53 43.38 4989 4989 MS2 18/30 Linfeng_20120130_CHD1_2.raw High QPAIISQLDPVNER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 337 2.67 0.00 0 10 25 2 790.42725 1579.84722 2.09 33.65 3244 3244 MS2 17/26 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 467 2.67 0.00 0 27 25 3 430.23987 1288.70505 0.63 30.21 2799 2799 MS2 24/44 Linfeng_122411_rIgG_3.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 602 2.66 0.00 0 16 25 2 588.30823 1175.60918 3.08 20.34 1591 1591 MS2 15/18 Linfeng_122411_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 323 2.66 0.00 0 7 25 2 701.89709 1402.78691 2.87 55.55 5993 5993 MS2 17/22 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 524 2.63 0.00 0 28 100 2 644.85706 1288.70683 2.01 36.51 3452 3452 MS2 17/22 Linfeng_20120130_CHD1_2.raw High AAEcNIVVTQPR Unambiguous 1 1 IPI00844578.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 309 2.63 0.00 0 10 25 2 679.34662 1357.68596 -2.48 24.38 2659 2659 MS2 18/22 Linfeng_091311_rIgG_4.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 587 2.62 0.00 0 32 25 2 588.30853 1175.60979 3.60 19.32 1500 1500 MS2 14/18 Linfeng_122411_rIgG_3.raw High KFESEILEAISQNSVVIIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 238 2.62 0.00 1 18 25 3 725.73682 2175.19590 -2.83 45.18 5344 5344 MS2 27/72 Linfeng_091311_rIgG_6.raw High GISHVIVDEIHER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 590 2.61 0.00 0 62 100 2 752.40204 1503.79680 3.54 42.03 4664 4664 MS2 16/24 Linfeng_20120130_CHD1_2.raw High GANLKDYYSR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 305 2.61 0.00 1 7 3 3 396.20013 1186.58585 0.60 3.32 317 317 MS2 23/36 Linfeng_122411_rIgG_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 340 2.59 0.00 0 41 25 3 473.27249 1417.80292 -1.47 52.75 6385 6385 MS2 20/44 Linfeng_091311_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 265 2.57 0.00 0 5 16 2 502.30115 1003.59502 1.46 34.11 3302 3302 MS2 17/18 Linfeng_122411_rIgG_3.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 255 2.56 0.00 0 52 25 3 473.27344 1417.80576 0.53 52.94 6315 6315 MS2 19/44 Linfeng_091311_rIgG_4.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 631 2.56 0.00 0 23 25 2 466.26227 931.51726 -3.77 22.59 2446 2446 MS2 15/16 Linfeng_091311_rIgG_2.raw High RISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 585 2.55 0.00 1 22 25 2 544.31323 1087.61919 -2.49 20.00 2048 2048 MS2 14/18 Linfeng_091311_rIgG_4.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 287 2.53 0.00 0 33 25 2 513.27576 1025.54424 2.68 36.81 3645 3645 MS2 13/14 Linfeng_122411_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 487 2.52 0.00 0 15 25 2 644.85400 1288.70073 -2.73 31.62 3640 3640 MS2 19/22 Linfeng_091311_rIgG_4.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 245 2.50 0.00 0 22 25 2 709.40649 1417.80571 0.49 52.70 6274 6274 MS2 16/22 Linfeng_091311_rIgG_3.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 503 2.45 0.00 0 21 25 2 588.30493 1175.60259 -2.53 27.34 3073 3073 MS2 15/18 Linfeng_091311_rIgG_3.raw High DVVQAYPEVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 500 2.45 0.00 0 18 25 2 588.30493 1175.60259 -2.53 27.35 3111 3111 MS2 14/18 Linfeng_091311_rIgG_2.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 392 2.43 0.00 0 28 100 2 513.27643 1025.54558 3.99 45.95 5614 5614 MS2 12/14 Linfeng_20120130_CHD1_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 281 2.41 0.00 0 12 25 2 502.29813 1003.58898 -4.56 35.23 4163 4163 MS2 17/18 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 232 2.40 0.00 0 37 25 2 709.40894 1417.81059 3.94 51.26 5499 5499 MS2 17/22 Linfeng_122411_rIgG_3.raw High YTQVGPDHNR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 115 2.39 0.00 0 67 25 2 593.78259 1186.55791 -1.75 15.00 1379 1379 MS2 15/18 Linfeng_091311_rIgG_2.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 401 2.37 0.00 0 9 25 2 579.33264 1157.65801 1.26 30.78 2873 2873 MS2 16/20 Linfeng_122411_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 339 2.36 0.00 0 23 25 2 701.89825 1402.78923 4.53 55.02 6520 6520 MS2 16/22 Linfeng_091311_rIgG_4.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 317 2.36 0.00 0 11 25 2 701.89709 1402.78691 2.87 55.02 6524 6524 MS2 16/22 Linfeng_091311_rIgG_5.raw High NFLYAWcGK Unambiguous 1 1 IPI00844578.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 140 2.35 0.00 0 15 25 2 579.77417 1158.54106 0.82 35.77 3514 3514 MS2 14/16 Linfeng_122411_rIgG_3.raw High KVFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 302 2.35 0.00 1 40 25 2 643.37720 1285.74712 -3.42 28.53 3272 3272 MS2 16/22 Linfeng_091311_rIgG_2.raw High TPLHEIALSIK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 180 2.34 0.00 0 33 100 2 611.36584 1221.72441 3.45 42.48 4771 4771 MS2 13/20 Linfeng_20120130_CHD1_2.raw High QPAIISQLDPVNER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 336 2.34 0.00 0 29 24 2 790.42242 1579.83757 -4.02 34.70 4095 4095 MS2 18/26 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 228 2.33 0.00 0 28 25 2 709.40869 1417.81011 3.59 51.43 5521 5521 MS2 16/22 Linfeng_122411_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 222 2.32 0.00 0 5 25 2 709.40918 1417.81108 4.28 51.30 5575 5575 MS2 16/22 Linfeng_122411_rIgG_4.raw High LAQFEPSQR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 556 2.31 0.00 0 13 2 2 538.27979 1075.55229 -0.78 3.57 357 357 MS2 15/16 Linfeng_122411_rIgG_3.raw High YPSPFFVFGEK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 310 2.28 0.00 0 18 25 2 659.32800 1317.64873 -2.07 42.71 5064 5064 MS2 14/20 Linfeng_091311_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 304 2.26 0.00 0 38 25 2 701.89679 1402.78630 2.44 54.94 6617 6617 MS2 16/22 Linfeng_091311_rIgG_2.raw High MGGEEAEIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 144 2.25 0.00 0 43 25 2 496.22800 991.44872 -2.70 20.25 2119 2119 MS2 14/16 Linfeng_091311_rIgG_2.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 310 2.20 0.00 0 16 25 2 513.27551 1025.54375 2.20 36.87 3795 3795 MS2 13/14 Linfeng_122411_rIgG_4.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 698 2.20 0.00 0 23 25 2 466.26300 931.51872 -2.20 22.60 2415 2415 MS2 15/16 Linfeng_091311_rIgG_3.raw High LNQYFQK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 257 2.20 0.00 0 14 13 2 470.74622 940.48516 -3.78 23.59 2588 2588 MS2 11/12 Linfeng_091311_rIgG_2.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 315 2.19 0.00 0 3 25 2 701.89752 1402.78777 3.48 54.97 6482 6482 MS2 16/22 Linfeng_091311_rIgG_3.raw High ETPFELIEALLK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 445 2.17 0.00 0 13 100 2 701.89648 1402.78569 2.00 55.44 7424 7424 MS2 14/22 Linfeng_20120130_CHD1_4.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 434 2.16 0.00 0 19 18 2 579.32861 1157.64995 -5.70 32.35 3785 3785 MS2 15/20 Linfeng_091311_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 285 2.14 0.00 0 16 25 2 502.29834 1003.58940 -4.13 35.31 4129 4129 MS2 16/18 Linfeng_091311_rIgG_3.raw High EGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 168 2.14 0.00 0 26 25 2 526.24957 1051.49187 -2.28 20.14 2078 2078 MS2 12/16 Linfeng_091311_rIgG_3.raw High LAAQScALSLVR Unambiguous 1 1 IPI00844578.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 2.13 0.00 0 20 25 2 644.85382 1288.70036 -3.01 31.85 3656 3656 MS2 18/22 Linfeng_091311_rIgG_6.raw High DFVNYLVR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 227 2.13 0.00 0 3 12 2 513.27197 1025.53667 -4.70 37.98 4523 4523 MS2 13/14 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 245 2.12 0.00 0 33 25 2 709.40674 1417.80620 0.84 52.68 6379 6379 MS2 16/22 Linfeng_091311_rIgG_2.raw High EGETVEPYK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 184 2.11 0.00 0 23 25 2 526.24945 1051.49162 -2.52 20.15 2105 2105 MS2 14/16 Linfeng_091311_rIgG_2.raw High KLEAGIR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 481 2.10 0.00 1 27 25 2 393.74414 786.48100 -2.87 16.26 1557 1557 MS2 10/12 Linfeng_091311_rIgG_2.raw High DINTDFLLVVLR Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 254 2.08 0.00 0 34 25 2 709.40710 1417.80693 1.35 53.03 6311 6311 MS2 17/22 Linfeng_091311_rIgG_5.raw High ISAVSVAER Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 617 2.07 0.00 0 37 25 2 466.26294 931.51860 -2.33 22.71 2426 2426 MS2 15/16 Linfeng_091311_rIgG_4.raw High YPSPFFVFGEK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 389 2.07 0.00 0 10 25 2 659.33087 1317.65447 2.29 41.64 4268 4268 MS2 16/20 Linfeng_122411_rIgG_3.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 366 2.04 0.00 0 41 25 2 579.32916 1157.65105 -4.75 32.31 3740 3740 MS2 14/20 Linfeng_091311_rIgG_3.raw High VFDPVPVGVTK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 432 2.02 0.00 0 26 25 2 579.33325 1157.65923 2.31 30.85 2913 2913 MS2 12/20 Linfeng_122411_rIgG_2.raw High LGGIGQFLAK Unambiguous 1 1 IPI00844578.1 CID 1.0000 0.0000 1 1 297 2.01 0.00 0 5 25 2 502.29831 1003.58934 -4.19 35.42 4135 4135 MS2 15/18 Linfeng_091311_rIgG_4.raw IPI00644712.4 X-ray repair cross-complementing protein 6 34.32 4 18 18 38 42.33 28.08 13 14 47.17 22.66 12 15 25.56 10.34 5 9 609 69.8 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLEALALDLMEPEQAVDLTLPK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 276 4.95 0.00 0 43 25 3 808.43011 2423.27579 0.76 53.33 6355 6355 MS2 38/84 Linfeng_091311_rIgG_4.raw High IISSDRDLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 269 4.61 0.00 1 5 25 3 676.03571 2026.09256 3.43 42.73 4531 4531 MS2 31/68 Linfeng_122411_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 276 4.09 0.00 0 43 25 2 1066.57507 2132.14287 0.05 51.99 6212 6212 MS2 25/36 Linfeng_091311_rIgG_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 411 3.93 0.00 0 11 25 2 787.41602 1573.82475 1.68 36.44 3740 3740 MS2 22/26 Linfeng_122411_rIgG_4.raw High TFNTSTGGLLLPSDTK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 519 3.74 0.00 0 32 100 2 826.43420 1651.86113 4.43 40.20 4729 4729 MS2 19/30 Linfeng_20120130_CHD1_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 287 3.72 0.00 0 13 25 3 711.38898 2132.15238 4.51 50.18 5447 5447 MS2 34/72 Linfeng_122411_rIgG_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 463 3.67 0.00 0 4 25 3 525.28027 1573.82627 2.64 36.49 3746 3746 MS2 33/52 Linfeng_122411_rIgG_4.raw High IISSDRDLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 294 3.65 0.00 1 10 25 3 676.03241 2026.08268 -1.45 43.81 5200 5200 MS2 32/68 Linfeng_091311_rIgG_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 288 3.44 0.00 0 20 25 3 711.38721 2132.14707 2.02 51.88 6203 6203 MS2 30/72 Linfeng_091311_rIgG_4.raw High NIPPYFVALVPQEEELDDQK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 360 3.38 0.00 0 10 25 3 782.06494 2344.18027 4.03 43.15 4583 4583 MS2 31/76 Linfeng_122411_rIgG_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 313 3.38 0.00 1 11 25 3 391.56830 1172.69034 1.51 28.05 2657 2657 MS2 23/36 Linfeng_122411_rIgG_4.raw High SGLKKQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 138 3.34 0.00 2 35 25 3 519.97778 1557.91880 -1.49 28.79 2756 2756 MS2 27/52 Linfeng_122411_rIgG_4.raw High DIISIAEDEDLR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 485 3.30 0.00 0 15 100 2 694.85181 1388.69634 4.25 45.39 5816 5816 MS2 19/22 Linfeng_20120130_CHD1_4.raw High IQVTPPGFQLVFLPFADDK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 247 3.29 0.00 0 35 25 2 1066.57727 2132.14726 2.11 50.21 5451 5451 MS2 22/36 Linfeng_122411_rIgG_4.raw High NIYVLQELDNPGAK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 626 3.22 0.00 0 32 100 2 787.41876 1573.83025 5.17 46.57 6075 6075 MS2 19/26 Linfeng_20120130_CHD1_4.raw High DIISIAEDEDLR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 498 3.18 0.00 0 8 100 2 694.85175 1388.69621 4.16 45.55 5851 5851 MS2 19/22 Linfeng_20120130_CHD1_4.raw High NIPPYFVALVPQEEELDDQK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 344 3.16 0.00 0 23 25 3 782.06030 2344.16635 -1.91 44.44 5278 5278 MS2 29/76 Linfeng_091311_rIgG_4.raw High TFNTSTGGLLLPSDTK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 322 3.15 0.00 0 26 25 2 826.42853 1651.84978 -2.44 34.42 4005 4005 MS2 23/30 Linfeng_091311_rIgG_4.raw High LGSLVDEFKELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 334 3.06 0.00 1 19 25 3 837.09106 2509.25864 3.52 45.34 4861 4861 MS2 31/84 Linfeng_122411_rIgG_4.raw High DSLIFLVDASK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 396 3.02 0.00 0 12 25 2 604.33380 1207.66033 2.80 40.37 4233 4233 MS2 17/20 Linfeng_122411_rIgG_4.raw High DLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 388 2.98 0.00 0 14 25 2 677.86365 1354.72002 -3.94 47.58 5674 5674 MS2 19/22 Linfeng_091311_rIgG_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 363 2.78 0.00 1 30 25 3 391.56683 1172.68595 -2.24 29.74 3392 3392 MS2 21/36 Linfeng_091311_rIgG_4.raw High DSLIFLVDASK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 420 2.74 0.00 0 6 25 2 604.33099 1207.65471 -1.85 41.71 4935 4935 MS2 18/20 Linfeng_091311_rIgG_4.raw High ELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 449 2.74 0.00 0 19 100 2 760.86981 1520.73235 3.65 32.40 3124 3124 MS2 14/24 Linfeng_20120130_CHD1_4.raw High DLLAVVFYGTEK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 312 2.71 0.00 0 16 25 2 677.86853 1354.72978 3.27 46.30 4982 4982 MS2 17/22 Linfeng_122411_rIgG_4.raw High DTGIFLDLMHLK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 421 2.62 0.00 0 26 25 2 701.87146 1402.73564 -3.09 45.60 5424 5424 MS2 18/22 Linfeng_091311_rIgG_4.raw High ELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 477 2.47 0.00 0 14 100 2 760.86932 1520.73137 3.00 33.48 3371 3371 MS2 11/24 Linfeng_20120130_CHD1_4.raw Medium KPGGFDISLFYR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 341 2.47 0.00 0 3 25 3 467.25122 1399.73911 1.56 37.52 3877 3877 MS2 25/44 Linfeng_122411_rIgG_4.raw High ILELDQFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 502 2.36 0.00 0 18 100 2 503.28690 1005.56651 4.92 41.93 5057 5057 MS2 10/14 Linfeng_20120130_CHD1_4.raw High ILELDQFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 528 2.34 0.00 0 28 100 2 503.28604 1005.56481 3.22 42.17 5101 5101 MS2 12/14 Linfeng_20120130_CHD1_4.raw High LGSLVDEFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 280 2.33 0.00 0 4 25 2 504.27222 1007.53716 -3.66 34.11 3965 3965 MS2 15/16 Linfeng_091311_rIgG_4.raw High KQELLEALTK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 358 2.33 0.00 1 18 25 2 586.84875 1172.69023 1.42 28.07 2660 2660 MS2 16/18 Linfeng_122411_rIgG_4.raw High ILELDQFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 551 2.20 0.00 0 20 100 2 503.28687 1005.56645 4.86 41.88 5047 5047 MS2 12/14 Linfeng_20120130_CHD1_4.raw High DIISIAEDEDLR Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 311 2.19 0.00 0 25 25 2 694.84705 1388.68682 -2.61 38.88 4577 4577 MS2 19/22 Linfeng_091311_rIgG_4.raw High LGSLVDEFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 454 2.18 0.00 0 10 25 2 504.27509 1007.54289 2.04 32.83 3283 3283 MS2 15/16 Linfeng_122411_rIgG_4.raw High ELVYPPDYNPEGK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 232 2.18 0.00 0 23 25 2 760.86530 1520.72331 -2.29 30.67 3517 3517 MS2 16/24 Linfeng_091311_rIgG_4.raw High ILELDQFK Unambiguous 4 1 IPI00644712.4 CID 1.0000 0.0000 1 1 260 2.08 0.00 0 3 19 2 503.28452 1005.56175 0.18 33.84 3412 3412 MS2 13/14 Linfeng_122411_rIgG_4.raw High VEYSEEELK Unambiguous 3 1 IPI00644712.4 CID 1.0000 0.0000 1 1 176 2.06 0.00 0 11 25 2 563.26697 1125.52666 -3.90 23.64 2556 2556 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00940851.1 ELAV-like protein 1 34.05 2 9 9 20 22.54 28.83 7 8 23.78 23.01 7 8 10.03 9.51 3 4 326 36.1 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEAEEAITSFNGHKPPGSSEPITVK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 308 4.89 0.00 0 3 25 3 871.43091 2612.27817 -2.22 29.99 3396 3396 MS2 35/96 Linfeng_091311_rIgG_7.raw High SLFSSIGEVESAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 334 3.31 0.00 0 13 25 2 677.34882 1353.69036 0.48 35.88 3720 3720 MS2 20/24 Linfeng_122411_rIgG_6.raw High SLFSSIGEVESAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 385 3.29 0.00 0 37 25 2 677.35004 1353.69280 2.29 34.21 2944 2944 MS2 20/24 Linfeng_122411_rIgG_7.raw High NVALLSQLYHSPAR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 331 3.26 0.00 0 1 25 2 784.93304 1568.85881 2.81 33.21 3387 3387 MS2 19/26 Linfeng_122411_rIgG_6.raw High VAGHSLGYGFVNYVTAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 385 3.25 0.00 0 6 25 3 594.97858 1782.92118 2.12 33.40 3411 3411 MS2 31/64 Linfeng_122411_rIgG_6.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 536 3.16 0.00 0 19 25 2 594.83276 1188.65825 -0.07 24.04 2175 2175 MS2 18/20 Linfeng_122411_rIgG_6.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 496 3.13 0.00 0 2 18 2 594.82996 1188.65264 -4.79 26.05 2858 2858 MS2 19/20 Linfeng_091311_rIgG_7.raw High LGDKILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 169 2.98 0.00 1 18 25 3 416.58432 1247.73841 2.04 31.57 3178 3178 MS2 22/40 Linfeng_122411_rIgG_6.raw High DANLYISGLPR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 723 2.86 0.00 0 27 100 2 609.82916 1218.65105 2.70 40.27 3555 3555 MS2 17/20 Linfeng_20120130_CHD1_7.raw High SLFSSIGEVESAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 515 2.86 0.00 0 11 100 2 677.35040 1353.69353 2.83 46.97 4965 4965 MS2 17/24 Linfeng_20120130_CHD1_7.raw High NVALLSQLYHSPAR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 318 2.63 0.00 0 6 25 2 784.92822 1568.84917 -3.34 34.37 3972 3972 MS2 19/26 Linfeng_091311_rIgG_7.raw High DANLYISGLPR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 473 2.55 0.00 0 31 25 2 609.82330 1218.63933 -6.92 35.28 4089 4089 MS2 18/20 Linfeng_091311_rIgG_7.raw High VAGHSLGYGFVNYVTAK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 402 2.54 0.00 0 18 19 3 594.97546 1782.91184 -3.12 34.22 3953 3953 MS2 32/64 Linfeng_091311_rIgG_7.raw High VLVDQTTGLSR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 495 2.50 0.00 0 13 25 2 594.83002 1188.65276 -4.69 26.16 2900 2900 MS2 17/20 Linfeng_091311_rIgG_6.raw High AINTLNGLR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 324 2.47 0.00 0 17 25 2 486.28479 971.56230 -1.03 24.84 2286 2286 MS2 15/16 Linfeng_122411_rIgG_6.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 188 2.23 0.00 0 19 100 2 417.75894 834.51061 2.64 33.70 2533 2533 MS2 10/12 Linfeng_20120130_CHD1_7.raw High AINTLNGLR Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 470 2.17 0.00 0 7 25 2 486.28192 971.55657 -6.93 26.93 2978 2978 MS2 15/16 Linfeng_091311_rIgG_7.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 138 2.13 0.00 0 18 25 2 417.75668 834.50609 -2.77 30.80 3508 3508 MS2 11/12 Linfeng_091311_rIgG_7.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 182 2.08 0.00 0 22 100 2 417.75900 834.51073 2.79 33.82 2551 2551 MS2 10/12 Linfeng_20120130_CHD1_7.raw High ILQVSFK Unambiguous 2 1 IPI00940851.1 CID 1.0000 0.0000 1 1 131 2.06 0.00 0 7 25 2 417.75882 834.51036 2.35 29.26 2876 2876 MS2 11/12 Linfeng_122411_rIgG_6.raw IPI00019038.1 Lysozyme C 33.11 1 3 3 6 18.04 33.11 3 6 148 16.5 9.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPGAVNAcHLScSALLQDNIADAVAcAK Unambiguous 1 1 IPI00019038.1 C8(Carbamidomethyl); C12(Carbamidomethyl); C26(Carbamidomethyl) CID 1.0000 0.0000 1 1 171 4.07 0.00 0 6 23 3 976.46259 2927.37320 -2.65 37.79 4561 4561 MS2 28/108 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 279 3.55 0.00 0 21 25 3 467.56323 1400.67514 -3.83 35.57 4273 4273 MS2 28/44 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 240 3.30 0.00 0 6 19 2 700.84131 1400.67534 -3.69 35.53 4268 4268 MS2 18/22 Linfeng_091311_rIgG_10.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 248 2.64 0.00 0 24 25 2 700.84204 1400.67681 -2.65 35.75 4144 4144 MS2 17/22 Linfeng_091311_rIgG_9.raw High STDYGIFQINSR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 259 2.29 0.00 0 38 25 2 700.84143 1400.67558 -3.52 35.79 4165 4165 MS2 13/22 Linfeng_091311_rIgG_6.raw High ATNYNAGDR Unambiguous 1 1 IPI00019038.1 CID 1.0000 0.0000 1 1 96 2.19 0.00 0 21 25 2 491.22275 981.43822 -0.27 12.86 1118 1118 MS2 14/16 Linfeng_091311_rIgG_10.raw IPI00003865.1 Isoform 1 of Heat shock cognate 71 kDa protein 32.97 6 13 16 33 33.66 22.14 10 11 34.31 16.41 8 11 34.39 14.86 7 11 646 70.9 5.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SINPDEAVAYGAAVQAAILSGDK Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 411 4.91 0.00 0 8 25 3 754.05603 2260.15354 3.48 45.55 4888 4888 MS2 35/88 Linfeng_122411_rIgG_4.raw High QTQTFTTYSDNQPGVLIQVYEGER Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 228 4.88 0.00 0 8 25 3 925.44598 2774.32340 -1.25 39.70 4682 4682 MS2 30/92 Linfeng_091311_rIgG_4.raw High SINPDEAVAYGAAVQAAILSGDK Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 400 4.87 0.00 0 6 25 3 754.05212 2260.14182 -1.71 46.76 5569 5569 MS2 38/88 Linfeng_091311_rIgG_4.raw High NQVAmNPTNTVFDAK Unambiguous 4 1 IPI00003865.1 M5(Oxidation) CID 1.0000 0.0000 1 1 414 4.09 0.00 0 13 100 2 833.40149 1665.79570 3.32 26.64 1980 1980 MS2 17/28 Linfeng_20120130_CHD1_4.raw High NQVAmNPTNTVFDAK Unambiguous 4 1 IPI00003865.1 M5(Oxidation) CID 1.0000 0.0000 1 1 404 3.80 0.00 0 23 100 2 833.40082 1665.79436 2.51 26.42 1946 1946 MS2 18/28 Linfeng_20120130_CHD1_4.raw High NQVAMNPTNTVFDAK Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 463 3.71 0.00 0 5 100 2 825.40411 1649.80095 3.45 34.15 3522 3522 MS2 20/28 Linfeng_20120130_CHD1_4.raw High ARFEELNADLFR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 347 3.52 0.00 1 39 25 3 494.25620 1480.75403 -0.24 34.19 3457 3457 MS2 27/44 Linfeng_122411_rIgG_4.raw High IINEPTAAAIAYGLDK Unambiguous 5 2 IPI00003865.1;IPI00003362.2 CID 1.0000 0.0000 1 1 457 3.50 0.00 0 10 100 2 830.45459 1659.90190 3.98 44.86 5701 5701 MS2 23/30 Linfeng_20120130_CHD1_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 368 3.48 0.00 0 5 25 3 661.33881 1982.00187 2.03 34.77 3531 3531 MS2 32/68 Linfeng_122411_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 527 3.45 0.00 0 6 100 2 991.50641 1982.00554 3.88 42.46 5157 5157 MS2 15/34 Linfeng_20120130_CHD1_4.raw High SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 361 3.37 0.00 0 22 25 3 494.60815 1481.80991 1.87 26.45 2445 2445 MS2 24/52 Linfeng_122411_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 380 3.33 0.00 0 6 25 3 400.56384 1199.67698 2.20 35.54 3626 3626 MS2 24/44 Linfeng_122411_rIgG_4.raw High ARFEELNADLFR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 356 3.24 0.00 1 0 25 3 494.25281 1480.74387 -7.10 35.14 4098 4098 MS2 26/44 Linfeng_091311_rIgG_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 294 3.22 0.00 0 11 25 2 991.50037 1981.99346 -2.22 35.91 4200 4200 MS2 16/34 Linfeng_091311_rIgG_4.raw High LDKSQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 273 3.03 0.00 1 21 25 3 613.34241 1838.01267 -0.25 28.90 2771 2771 MS2 23/64 Linfeng_122411_rIgG_4.raw High NSLESYAFNmK Unambiguous 1 1 IPI00003865.1 M10(Oxidation) CID 1.0000 0.0000 1 1 208 2.99 0.00 0 43 100 2 660.30292 1319.59856 3.70 32.51 3151 3151 MS2 13/20 Linfeng_20120130_CHD1_4.raw High TVTNAVVTVPAYFNDSQR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 366 2.97 0.00 0 15 25 3 661.33551 1981.99198 -2.96 35.83 4189 4189 MS2 30/68 Linfeng_091311_rIgG_4.raw High NQTAEKEEFEHQQK Unambiguous 1 1 IPI00003865.1 CID 1.0000 0.0000 1 1 212 2.91 0.00 1 14 25 3 582.60687 1745.80606 -1.67 15.50 1410 1410 MS2 26/52 Linfeng_091311_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 359 2.90 0.00 0 12 25 2 600.34229 1199.67729 2.47 35.48 3619 3619 MS2 20/22 Linfeng_122411_rIgG_4.raw High MKEIAEAYLGK Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 386 2.86 0.00 1 26 25 3 418.22607 1252.66367 2.41 24.76 2218 2218 MS2 23/40 Linfeng_122411_rIgG_4.raw High NSLESYAFNMK Unambiguous 1 1 IPI00003865.1 CID 1.0000 0.0000 1 1 298 2.85 0.00 0 39 100 2 652.30603 1303.60478 4.62 40.82 4845 4845 MS2 15/20 Linfeng_20120130_CHD1_4.raw High DAGTIAGLNVLR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 489 2.83 0.00 0 8 100 2 600.34338 1199.67949 4.30 42.76 5219 5219 MS2 19/22 Linfeng_20120130_CHD1_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 223 2.64 0.00 0 47 25 2 744.35620 1487.70513 2.56 27.93 2361 2361 MS2 17/24 Linfeng_122411_rIgG_10.raw High SQIHDIVLVGGSTR Unambiguous 3 1 IPI00003865.1 CID 1.0000 0.0000 1 1 429 2.51 0.00 0 11 100 3 494.60886 1481.81202 3.30 33.54 3385 3385 MS2 19/52 Linfeng_20120130_CHD1_4.raw Medium STAGDTHLGGEDFDNR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 45 2.49 0.00 0 59 19 3 564.57800 1691.71946 -3.67 23.45 2529 2529 MS2 23/60 Linfeng_091311_rIgG_4.raw High DAGTIAGLNVLR Unambiguous 4 1 IPI00003865.1 CID 1.0000 0.0000 1 1 431 2.44 0.00 0 30 25 2 600.33795 1199.66863 -4.76 36.69 4299 4299 MS2 20/22 Linfeng_091311_rIgG_4.raw High FEELNADLFR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 501 2.38 0.00 0 25 100 2 627.31421 1253.62114 3.99 46.80 6123 6123 MS2 15/18 Linfeng_20120130_CHD1_4.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw High NSLESYAFNmK Unambiguous 1 1 IPI00003865.1 M10(Oxidation) CID 1.0000 0.0000 1 1 214 2.28 0.00 0 37 100 2 660.30200 1319.59673 2.31 32.83 3223 3223 MS2 12/20 Linfeng_20120130_CHD1_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 222 2.22 0.00 0 14 25 2 744.35614 1487.70500 2.48 29.24 2817 2817 MS2 19/24 Linfeng_122411_rIgG_4.raw High FEELNADLFR Unambiguous 5 1 IPI00003865.1 CID 1.0000 0.0000 1 1 337 2.20 0.00 0 16 25 2 627.30981 1253.61235 -3.02 37.85 4447 4447 MS2 15/18 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 183 2.13 0.00 0 21 25 2 744.35291 1487.69853 -1.87 30.71 3523 3523 MS2 18/24 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 229 2.04 0.00 0 39 25 2 744.35632 1487.70537 2.73 27.90 2277 2277 MS2 17/24 Linfeng_122411_rIgG_9.raw IPI00797788.1 12 kDa protein 32.35 5 3 3 3 6.99 32.35 3 3 102 11.8 5.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High cLVFSLIGLHFK Unambiguous 5 1 IPI00797788.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 313 2.64 0.00 0 3 25 3 478.60287 1433.79407 -2.33 44.62 5429 5429 MS2 26/44 Linfeng_091311_rIgG_10.raw High VFYYLVQDLK Unambiguous 5 1 IPI00797788.1 CID 1.0000 0.0000 1 1 492 2.24 0.00 0 13 25 2 644.35156 1287.69585 -1.97 39.43 4771 4771 MS2 16/18 Linfeng_091311_rIgG_10.raw High IGSLIDVNQSK Unambiguous 5 1 IPI00797788.1 CID 1.0000 0.0000 1 1 472 2.11 0.00 0 6 17 2 587.32343 1173.63957 -6.69 28.74 3359 3359 MS2 18/20 Linfeng_091311_rIgG_10.raw IPI00013296.3 40S ribosomal protein S18 31.58 3 5 5 8 19.83 31.58 5 8 152 17.7 10.99 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YSQVLANGLDNK Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 352 3.21 0.00 0 51 25 2 661.33899 1321.67070 -3.03 27.08 3127 3127 MS2 18/22 Linfeng_091311_rIgG_10.raw High YSQVLANGLDNK Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 349 2.71 0.00 0 26 25 2 661.33929 1321.67131 -2.56 27.03 3120 3120 MS2 18/22 Linfeng_091311_rIgG_10.raw High AGELTEDEVER Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 153 2.66 0.00 0 30 25 2 624.28772 1247.56816 -5.54 22.66 2508 2508 MS2 16/20 Linfeng_091311_rIgG_10.raw High KADIDLTK Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 522 2.56 0.00 1 10 25 2 452.26013 903.51299 -1.81 18.80 1959 1959 MS2 13/14 Linfeng_091311_rIgG_10.raw High AGELTEDEVER Unambiguous 1 1 IPI00013296.3 CID 1.0000 0.0000 1 1 156 2.38 0.00 0 58 25 2 624.28949 1247.57170 -2.70 22.87 2420 2420 MS2 16/20 Linfeng_091311_rIgG_9.raw High VLNTNIDGR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 536 2.22 0.00 0 45 25 2 501.26971 1001.53215 -5.32 22.61 2501 2501 MS2 14/16 Linfeng_091311_rIgG_10.raw High IPDWFLNR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 603 2.06 0.00 0 5 25 2 530.78113 1060.55498 -2.37 39.17 4738 4738 MS2 13/14 Linfeng_091311_rIgG_10.raw High VLNTNIDGR Unambiguous 3 1 IPI00013296.3 CID 1.0000 0.0000 1 1 537 2.02 0.00 0 35 25 2 501.27094 1001.53459 -2.88 22.84 2415 2415 MS2 14/16 Linfeng_091311_rIgG_9.raw IPI00041325.1 H/ACA ribonucleoprotein complex subunit 2 31.37 4 4 4 4 14.77 31.37 4 4 0.00 153 17.2 8.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IKADPDGPEAQAEAcSGER Unambiguous 4 1 IPI00041325.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 4.85 0.00 1 10 25 3 667.63599 2000.89341 -2.26 21.97 2293 2293 MS2 35/72 Linfeng_091311_rIgG_9.raw High TYQELLVNQNPIAQPLASR Unambiguous 4 1 IPI00041325.1 CID 1.0000 0.0000 1 1 345 4.64 0.00 0 12 22 3 719.05377 2155.14676 -1.81 37.57 4378 4378 MS2 34/72 Linfeng_091311_rIgG_9.raw High ADPDGPEAQAEAcSGER Unambiguous 4 1 IPI00041325.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 12 3.12 0.00 0 27 25 2 880.36096 1759.71465 -2.41 21.87 2280 2280 MS2 23/32 Linfeng_091311_rIgG_9.raw High TDLGAAAGSK Unambiguous 1 1 IPI00041325.1 CID 1.0000 0.0000 1 1 514 2.15 0.00 0 45 25 2 445.73203 890.45677 -1.20 16.82 1563 1563 MS2 17/18 Linfeng_091311_rIgG_9.raw IPI00010105.1 Eukaryotic translation initiation factor 6 31.02 1 3 3 3 13.23 31.02 3 3 245 26.6 4.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LSALGNVTTcNDYVALVHPDLDRETEEILADVLK Unambiguous 1 1 IPI00010105.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 185 4.89 0.00 1 56 25 4 946.73096 3783.90200 -2.41 50.58 6126 6126 MS2 45/198 Linfeng_091311_rIgG_8.raw High TSIEDQDELSSLLQVPLVAGTVNR Unambiguous 1 1 IPI00010105.1 CID 1.0000 0.0000 1 1 263 4.17 0.00 0 24 25 3 862.11853 2584.34104 -2.14 48.34 5840 5840 MS2 36/92 Linfeng_091311_rIgG_8.raw High HGLLVPNNTTDQELQHIR Unambiguous 1 1 IPI00010105.1 CID 1.0000 0.0000 1 1 384 4.16 0.00 0 22 25 3 695.69714 2085.07688 -3.25 29.20 3353 3353 MS2 32/68 Linfeng_091311_rIgG_8.raw IPI00450768.7 "Keratin, type I cytoskeletal 17" 31.02 9 5 14 173 92.54 16.90 8 37 69.41 18.29 9 24 324.25 15.97 8 112 432 48.1 5.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 191 5.10 0.00 0 3 25 2 1034.57690 2068.14653 3.26 41.02 3953 3953 MS2 24/36 Linfeng_122411_rIgG_9.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 226 4.97 0.00 0 3 25 3 690.05365 2068.14640 3.19 40.87 4049 4049 MS2 42/72 Linfeng_122411_rIgG_10.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 207 4.90 0.00 0 4 25 3 690.05334 2068.14548 2.75 41.52 4016 4016 MS2 40/72 Linfeng_122411_rIgG_9.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 IPI00450768.7 M11(Oxidation) CID 1.0000 0.0000 1 1 427 4.78 0.00 0 0 100 2 1065.51501 2130.02275 4.43 35.59 3651 3651 MS2 24/40 Linfeng_20120130_CHD1_1.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 IPI00450768.7 M11(Oxidation) CID 1.0000 0.0000 1 1 387 4.42 0.00 0 0 100 2 1065.51416 2130.02104 3.63 35.75 3861 3861 MS2 23/40 Linfeng_20120130_CHD1_4.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 IPI00450768.7 M11(Oxidation) CID 1.0000 0.0000 1 1 410 4.30 0.00 0 6 100 2 1065.51550 2130.02373 4.89 35.66 3668 3668 MS2 21/40 Linfeng_20120130_CHD1_1.raw High GQVGGEINVEmDAAPGVDLSR Unambiguous 2 1 IPI00450768.7 M11(Oxidation) CID 1.0000 0.0000 1 1 399 3.79 0.00 0 0 100 2 1065.51379 2130.02031 3.29 35.74 3686 3686 MS2 22/40 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 601 3.44 0.00 0 30 100 2 515.30231 1029.59734 3.30 36.62 4242 4242 MS2 15/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 437 3.40 0.00 1 14 4 3 460.58035 1379.72651 -0.94 3.70 356 356 MS2 25/40 Linfeng_122411_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 500 3.40 0.00 1 3 100 2 690.36975 1379.73223 3.21 36.29 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 561 3.38 0.00 0 32 100 2 515.30255 1029.59783 3.77 36.55 4228 4228 MS2 15/16 Linfeng_20120130_CHD1_10.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 441 3.32 0.00 0 5 1 2 673.34503 1345.68279 -1.36 3.61 341 341 MS2 18/22 Linfeng_122411_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 3.28 0.00 1 39 100 2 532.80988 1064.61247 2.41 23.53 1641 1641 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 3.26 0.00 1 28 100 2 532.81073 1064.61418 4.01 24.09 1617 1617 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 3.25 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.94 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 3.24 0.00 1 7 100 2 532.81036 1064.61345 3.32 23.69 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.22 0.00 1 3 100 2 532.81079 1064.61431 4.13 23.87 1929 1929 MS2 14/16 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 554 3.22 0.00 0 11 100 2 515.30261 1029.59795 3.89 37.25 4154 4154 MS2 15/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 291 3.21 0.00 1 37 100 2 532.81067 1064.61406 3.90 23.49 1638 1638 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 3.19 0.00 1 24 100 2 532.81024 1064.61321 3.10 24.20 1628 1628 MS2 14/16 Linfeng_20120130_CHD1_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 566 3.17 0.00 1 17 100 2 690.36859 1379.72991 1.53 35.01 3962 3962 MS2 16/20 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.17 0.00 1 19 100 2 532.81055 1064.61382 3.67 25.40 1787 1787 MS2 13/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 631 3.16 0.00 0 38 100 2 515.30200 1029.59673 2.71 35.98 4191 4191 MS2 15/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 25 100 2 532.81049 1064.61370 3.55 25.51 1893 1893 MS2 14/16 Linfeng_20120130_CHD1_5.raw High ILTATVDNANILLQIDNAR Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 207 3.15 0.00 0 25 25 3 690.05322 2068.14511 2.57 40.12 3839 3839 MS2 32/72 Linfeng_122411_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 3.15 0.00 1 21 100 2 532.80975 1064.61223 2.18 24.32 1728 1728 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 329 3.15 0.00 1 0 100 2 532.81036 1064.61345 3.32 25.98 1682 1682 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.13 0.00 1 19 100 2 532.80963 1064.61199 1.95 24.50 1751 1751 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 292 3.12 0.00 1 24 100 2 532.81067 1064.61406 3.90 23.92 1679 1679 MS2 14/16 Linfeng_20120130_CHD1_5.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 396 3.11 0.00 1 12 25 3 460.57956 1379.72412 -2.66 27.74 2854 2854 MS2 23/40 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.11 0.00 1 0 100 2 532.81091 1064.61455 4.36 23.24 1566 1566 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 324 3.10 0.00 1 20 100 2 532.81042 1064.61357 3.44 24.13 1707 1707 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 3.08 0.00 1 3 100 2 532.81042 1064.61357 3.44 24.06 1655 1655 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 3.07 0.00 1 3 100 2 532.81097 1064.61467 4.47 24.97 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 3.07 0.00 1 10 100 2 532.80975 1064.61223 2.18 25.31 1754 1754 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.07 0.00 1 26 100 2 532.81049 1064.61370 3.55 24.02 1607 1607 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LSVEADINGLR Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 479 3.05 0.00 0 45 100 2 593.82648 1186.64568 2.52 38.30 4558 4558 MS2 17/20 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 313 3.05 0.00 1 26 100 2 532.81067 1064.61406 3.90 23.73 1661 1661 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.05 0.00 1 3 100 2 532.81061 1064.61394 3.78 24.30 1966 1966 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 3.04 0.00 1 4 100 2 532.81055 1064.61382 3.67 23.47 1866 1866 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 3.04 0.00 1 36 100 2 532.80969 1064.61211 2.06 23.61 1650 1650 MS2 14/16 Linfeng_20120130_CHD1_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 3.04 0.00 1 7 100 2 532.81049 1064.61370 3.55 23.60 1885 1885 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 309 3.04 0.00 1 3 100 2 532.81073 1064.61418 4.01 23.95 1936 1936 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 317 3.03 0.00 1 9 100 2 532.81067 1064.61406 3.90 25.32 2088 2088 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 3.03 0.00 1 18 100 2 532.81061 1064.61394 3.78 24.22 1717 1717 MS2 14/16 Linfeng_20120130_CHD1_5.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 622 3.02 0.00 0 29 100 2 515.30243 1029.59758 3.54 36.62 3333 3333 MS2 15/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 300 3.02 0.00 1 25 100 2 532.81085 1064.61443 4.24 23.80 1667 1667 MS2 14/16 Linfeng_20120130_CHD1_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 575 3.01 0.00 0 36 100 2 515.30249 1029.59770 3.65 36.14 3775 3775 MS2 15/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 3.00 0.00 1 6 100 2 532.81055 1064.61382 3.67 23.43 1861 1861 MS2 14/16 Linfeng_20120130_CHD1_10.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 3.00 0.00 0 5 25 2 681.34723 1361.68718 -2.63 21.80 2277 2277 MS2 20/24 Linfeng_091311_rIgG_7.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 375 2.99 0.00 0 13 25 2 681.34735 1361.68743 -2.45 21.72 2294 2294 MS2 20/24 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 346 2.98 0.00 1 13 100 2 532.81012 1064.61296 2.87 23.87 1650 1650 MS2 13/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.97 0.00 1 5 100 2 532.81055 1064.61382 3.67 23.63 1890 1890 MS2 14/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.96 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.16 1623 1623 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 306 2.96 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.39 1586 1586 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 572 2.96 0.00 0 23 100 2 515.30249 1029.59770 3.65 36.54 3460 3460 MS2 15/16 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.95 0.00 1 33 100 3 460.58240 1379.73264 3.51 35.92 3894 3894 MS2 23/40 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 574 2.95 0.00 0 20 100 2 515.30249 1029.59770 3.65 37.20 3443 3443 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 624 2.94 0.00 0 26 100 2 515.30243 1029.59758 3.54 36.25 3953 3953 MS2 15/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.94 0.00 1 4 100 2 532.81036 1064.61345 3.32 24.78 1581 1581 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 312 2.93 0.00 1 1 100 2 532.81091 1064.61455 4.36 23.62 1614 1614 MS2 14/16 Linfeng_20120130_CHD1_1.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 377 2.92 0.00 0 10 25 2 681.34717 1361.68706 -2.72 21.41 2280 2280 MS2 19/24 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 302 2.92 0.00 1 4 100 2 532.81073 1064.61418 4.01 23.18 1561 1561 MS2 14/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 582 2.91 0.00 0 25 100 2 515.30261 1029.59795 3.89 36.97 3402 3402 MS2 15/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 296 2.91 0.00 1 4 100 2 532.81085 1064.61443 4.24 23.33 1578 1578 MS2 14/16 Linfeng_20120130_CHD1_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 583 2.91 0.00 0 28 100 2 515.30255 1029.59783 3.77 37.16 3436 3436 MS2 15/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 316 2.90 0.00 1 7 100 2 532.81097 1064.61467 4.47 24.70 1583 1583 MS2 13/16 Linfeng_20120130_CHD1_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 36 100 2 532.81061 1064.61394 3.78 23.80 1579 1579 MS2 15/16 Linfeng_20120130_CHD1_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 512 2.89 0.00 1 42 100 3 460.58234 1379.73246 3.37 36.47 3998 3998 MS2 21/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 332 2.88 0.00 1 3 100 2 532.81055 1064.61382 3.67 23.89 1639 1639 MS2 14/16 Linfeng_20120130_CHD1_1.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 387 2.88 0.00 1 19 25 3 460.57990 1379.72513 -1.93 27.95 3121 3121 MS2 23/40 Linfeng_091311_rIgG_9.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 570 2.88 0.00 1 22 100 3 460.58252 1379.73301 3.77 36.04 3913 3913 MS2 22/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.87 0.00 1 5 100 2 532.81012 1064.61296 2.87 25.38 1759 1759 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 315 2.86 0.00 1 2 100 2 532.81122 1064.61516 4.93 25.44 1813 1813 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 336 2.86 0.00 1 4 100 2 532.81036 1064.61345 3.32 23.48 1596 1596 MS2 14/16 Linfeng_20120130_CHD1_1.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 360 2.85 0.00 0 9 25 2 681.34778 1361.68828 -1.82 21.55 2263 2263 MS2 19/24 Linfeng_091311_rIgG_4.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 381 2.84 0.00 0 1 25 2 681.34705 1361.68682 -2.90 21.69 2254 2254 MS2 20/24 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 331 2.83 0.00 1 1 100 2 532.81055 1064.61382 3.67 24.44 1692 1692 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 335 2.83 0.00 1 2 100 2 532.81061 1064.61394 3.78 23.75 1625 1625 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 340 2.82 0.00 1 11 100 2 532.81012 1064.61296 2.87 25.17 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 615 2.81 0.00 0 19 100 2 515.30200 1029.59673 2.71 36.95 3030 3030 MS2 15/16 Linfeng_20120130_CHD1_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.80 0.00 1 21 100 2 532.81006 1064.61284 2.75 24.34 1640 1640 MS2 13/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 620 2.78 0.00 0 21 100 2 515.30231 1029.59734 3.30 37.17 4005 4005 MS2 15/16 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.78 0.00 1 18 100 2 532.80981 1064.61235 2.29 23.32 1845 1845 MS2 13/16 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 311 2.76 0.00 1 2 100 2 532.81079 1064.61431 4.13 23.08 1551 1551 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LSVEADINGLR Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 579 2.76 0.00 0 50 100 2 593.82678 1186.64629 3.03 38.22 4544 4544 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 330 2.76 0.00 1 26 100 2 532.81055 1064.61382 3.67 24.38 1645 1645 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 326 2.75 0.00 1 25 100 2 532.81055 1064.61382 3.67 23.97 1684 1684 MS2 14/16 Linfeng_20120130_CHD1_5.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 365 2.74 0.00 0 21 25 2 681.34790 1361.68852 -1.64 21.53 2267 2267 MS2 18/24 Linfeng_091311_rIgG_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.74 0.00 1 31 100 2 532.81006 1064.61284 2.75 24.29 1849 1849 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.72 0.00 1 9 100 2 532.81030 1064.61333 3.21 24.75 1710 1710 MS2 14/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 621 2.71 0.00 0 24 100 2 515.30182 1029.59636 2.35 36.91 3019 3019 MS2 15/16 Linfeng_20120130_CHD1_7.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 586 2.71 0.00 1 12 100 2 690.36877 1379.73027 1.79 36.50 3449 3449 MS2 16/20 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 515 2.71 0.00 1 35 100 3 460.58221 1379.73209 3.11 36.40 3984 3984 MS2 21/40 Linfeng_20120130_CHD1_4.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 465 2.71 0.00 0 26 25 2 673.34747 1345.68767 2.27 25.85 2010 2010 MS2 18/22 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.69 0.00 1 7 100 2 532.81024 1064.61321 3.10 23.64 1498 1498 MS2 13/16 Linfeng_20120130_CHD1_3.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.69 0.00 1 23 100 3 460.58240 1379.73264 3.51 36.10 3924 3924 MS2 22/40 Linfeng_20120130_CHD1_4.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 374 2.68 0.00 1 20 25 2 690.36572 1379.72417 -2.63 27.97 3123 3123 MS2 16/20 Linfeng_091311_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.68 0.00 1 38 100 2 532.81042 1064.61357 3.44 25.01 1914 1914 MS2 13/16 Linfeng_20120130_CHD1_8.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.68 0.00 1 25 25 2 690.36560 1379.72392 -2.81 27.75 2856 2856 MS2 16/20 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 294 2.67 0.00 1 1 100 2 532.81067 1064.61406 3.90 24.90 1590 1590 MS2 13/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 344 2.67 0.00 1 22 100 2 532.81042 1064.61357 3.44 25.54 1806 1806 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LSVEADINGLR Unambiguous 3 1 IPI00450768.7 CID 1.0000 0.0000 1 1 412 2.67 0.00 0 24 25 2 593.82605 1186.64482 1.80 31.14 2702 2702 MS2 19/20 Linfeng_122411_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 333 2.66 0.00 1 6 100 2 532.81012 1064.61296 2.87 23.57 1492 1492 MS2 14/16 Linfeng_20120130_CHD1_3.raw High EVATNSELVQSGK Unambiguous 4 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 378 2.65 0.00 0 7 25 2 681.34723 1361.68718 -2.63 20.04 1805 1805 MS2 19/24 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.63 0.00 1 33 100 2 532.80994 1064.61260 2.52 23.82 1815 1815 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 334 2.62 0.00 1 8 100 2 532.81030 1064.61333 3.21 25.05 1733 1733 MS2 13/16 Linfeng_20120130_CHD1_9.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 338 2.59 0.00 1 2 100 2 532.81055 1064.61382 3.67 25.71 1688 1688 MS2 13/16 Linfeng_20120130_CHD1_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 320 2.59 0.00 1 24 100 2 532.81085 1064.61443 4.24 24.44 1862 1862 MS2 14/16 Linfeng_20120130_CHD1_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 343 2.59 0.00 1 9 100 2 532.81049 1064.61370 3.55 23.74 1505 1505 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 303 2.59 0.00 1 7 100 2 532.81079 1064.61431 4.13 23.75 1912 1912 MS2 14/16 Linfeng_20120130_CHD1_10.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 571 2.58 0.00 1 30 100 3 460.58249 1379.73291 3.71 36.00 3907 3907 MS2 21/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.57 0.00 1 37 100 2 532.81024 1064.61321 3.10 24.97 1910 1910 MS2 13/16 Linfeng_20120130_CHD1_8.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 617 2.56 0.00 0 31 100 2 515.30212 1029.59697 2.94 36.77 2999 2999 MS2 14/16 Linfeng_20120130_CHD1_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 608 2.56 0.00 0 36 100 2 515.30212 1029.59697 2.94 36.71 2988 2988 MS2 15/16 Linfeng_20120130_CHD1_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 337 2.55 0.00 1 22 100 2 532.81012 1064.61296 2.87 25.25 1743 1743 MS2 13/16 Linfeng_20120130_CHD1_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 444 2.55 0.00 1 24 25 3 460.57932 1379.72339 -3.20 27.76 3167 3167 MS2 21/40 Linfeng_091311_rIgG_2.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 339 2.54 0.00 1 28 100 2 532.81061 1064.61394 3.78 25.65 1820 1820 MS2 14/16 Linfeng_20120130_CHD1_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.52 0.00 1 28 100 2 532.81012 1064.61296 2.87 24.01 1827 1827 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 322 2.51 0.00 1 44 100 2 593.35254 1185.69780 2.31 41.52 4977 4977 MS2 14/18 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.50 0.00 1 42 100 2 532.81000 1064.61272 2.64 23.56 1795 1795 MS2 13/16 Linfeng_20120130_CHD1_8.raw Medium TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 575 2.49 0.00 1 45 100 3 460.58267 1379.73346 4.10 36.69 4044 4044 MS2 22/40 Linfeng_20120130_CHD1_4.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 348 2.49 0.00 1 29 100 2 532.81012 1064.61296 2.87 24.73 1888 1888 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 314 2.48 0.00 1 29 100 2 532.81079 1064.61431 4.13 24.41 1859 1859 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.35 0.00 1 27 100 2 532.81036 1064.61345 3.32 24.10 1833 1833 MS2 14/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 363 2.33 0.00 1 17 25 2 690.36609 1379.72490 -2.10 27.96 3090 3090 MS2 16/20 Linfeng_091311_rIgG_5.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 428 2.30 0.00 0 44 25 2 673.34363 1345.67998 -3.45 27.03 3067 3067 MS2 17/22 Linfeng_091311_rIgG_2.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 349 2.28 0.00 1 32 100 2 532.81030 1064.61333 3.21 24.69 1885 1885 MS2 11/16 Linfeng_20120130_CHD1_8.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 274 2.26 0.00 1 8 25 2 532.80756 1064.60784 -1.95 23.03 2049 2049 MS2 14/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 325 2.22 0.00 1 4 100 2 532.81006 1064.61284 2.75 23.69 1506 1506 MS2 12/16 Linfeng_20120130_CHD1_2.raw High TRLEQEIATYR Unambiguous 12 3 IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 383 2.19 0.00 1 23 25 2 690.36566 1379.72405 -2.72 28.02 3149 3149 MS2 13/20 Linfeng_091311_rIgG_6.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 345 2.17 0.00 1 14 100 2 532.80988 1064.61247 2.41 23.71 1639 1639 MS2 12/16 Linfeng_20120130_CHD1_9.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 342 2.16 0.00 1 37 100 2 532.81018 1064.61308 2.98 24.87 1901 1901 MS2 13/16 Linfeng_20120130_CHD1_8.raw High ALEEANTELEVK Unambiguous 4 1 IPI00450768.7 CID 1.0000 0.0000 1 1 367 2.12 0.00 0 48 25 2 673.34332 1345.67937 -3.90 27.22 2782 2782 MS2 17/22 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High NHEEEMNALR Unambiguous 6 2 IPI00384444.6;IPI00450768.7 CID 1.0000 0.0000 1 1 55 2.08 0.00 0 7 25 2 621.77930 1242.55132 -1.53 20.04 2019 2019 MS2 13/18 Linfeng_091311_rIgG_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High LASYLDKVR Unambiguous 20 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7 CID 1.0000 0.0000 1 1 212 2.02 0.00 1 6 1 2 532.80859 1064.60991 0.00 3.65 373 373 MS2 14/16 Linfeng_122411_rIgG_2.raw High LASYLDK Unambiguous 22 5 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00019359.4 CID 1.0000 0.0000 1 1 244 2.01 0.00 0 28 100 2 405.22485 809.44243 2.54 21.37 1394 1394 MS2 10/12 Linfeng_20120130_CHD1_4.raw High LSGGLGAGScR Unambiguous 4 1 IPI00450768.7 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 308 2.01 0.00 0 6 25 2 517.75354 1034.49980 -4.84 19.58 1955 1955 MS2 15/20 Linfeng_091311_rIgG_5.raw IPI00027252.6 Prohibitin-2 30.77 2 7 7 7 20.82 30.77 7 7 0.00 299 33.3 9.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IYLTADNLVLNLQDESFTR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 369 4.57 0.00 0 23 25 3 742.38580 2225.14286 -0.93 45.72 5405 5405 MS2 31/72 Linfeng_091311_rIgG_7.raw High IGGVQQDTILAEGLHFR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 401 4.11 0.00 0 4 25 3 618.66486 1853.98001 -3.72 37.58 4382 4382 MS2 33/64 Linfeng_091311_rIgG_7.raw High IVQAEGEAEAAK Unambiguous 1 1 IPI00027252.6 CID 1.0000 0.0000 1 1 379 2.70 0.00 0 3 25 2 608.31305 1215.61882 -2.31 18.70 1848 1848 MS2 20/22 Linfeng_091311_rIgG_7.raw High IPWFQYPIIYDIR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 428 2.57 0.00 0 26 25 3 575.31061 1723.91727 -1.98 49.20 5840 5840 MS2 18/48 Linfeng_091311_rIgG_7.raw High FNASQLITQR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 433 2.55 0.00 0 34 25 2 589.31805 1177.62883 -3.07 31.99 3665 3665 MS2 16/18 Linfeng_091311_rIgG_7.raw High LLLGAGAVAYGVR Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 233 2.19 0.00 0 12 25 2 630.37494 1259.74260 -3.57 35.81 4157 4157 MS2 19/24 Linfeng_091311_rIgG_7.raw High LGLDYEER Unambiguous 2 1 IPI00027252.6 CID 1.0000 0.0000 1 1 217 2.13 0.00 0 20 25 2 497.74442 994.48155 -2.50 27.82 3101 3101 MS2 13/14 Linfeng_091311_rIgG_7.raw IPI00000690.1 "Isoform 1 of Apoptosis-inducing factor 1, mitochondrial" 30.51 5 14 14 20 65.40 30.51 14 20 613 66.9 8.95 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IDNSVLVLIVGLSTVGAGAYAYK Unambiguous 2 1 IPI00000690.1 CID 1.0000 0.0000 1 1 124 5.28 0.00 0 17 25 3 775.10413 2323.29782 2.99 55.01 6518 6518 MS2 40/88 Linfeng_091311_rIgG_4.raw High SITIIGGGFLGSELAcALGR Unambiguous 3 1 IPI00000690.1 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 304 5.22 0.00 0 16 25 2 996.53326 1992.05925 0.43 49.94 5973 5973 MS2 27/38 Linfeng_091311_rIgG_4.raw High IDNSVLVLIVGLSTVGAGAYAYK Unambiguous 2 1 IPI00000690.1 CID 1.0000 0.0000 1 1 125 5.10 0.00 0 4 25 3 775.10468 2323.29947 3.70 55.01 6523 6523 MS2 40/88 Linfeng_091311_rIgG_5.raw High APSHVPFLLIGGGTAAFAAAR Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 284 4.02 0.00 0 5 25 3 675.37231 2024.10239 -2.63 40.62 4798 4798 MS2 36/80 Linfeng_091311_rIgG_4.raw High KAALSASEGEEVPQDK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 359 3.67 0.00 1 9 25 3 553.61169 1658.82053 -1.65 20.16 2071 2071 MS2 29/60 Linfeng_091311_rIgG_4.raw High RVEHHDHAVVSGR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 383 3.67 0.00 1 58 25 4 375.44656 1498.76442 1.46 2.39 202 202 MS2 32/72 Linfeng_091311_rIgG_4.raw High SITIIGGGFLGSELAcALGR Unambiguous 3 1 IPI00000690.1 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 360 3.30 0.00 0 18 25 3 664.69116 1992.05893 0.27 49.91 5969 5969 MS2 38/76 Linfeng_091311_rIgG_4.raw High KVETDHIVAAVGLEPNVELAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 265 3.28 0.00 1 35 25 3 744.74445 2232.21878 -2.13 33.05 3829 3829 MS2 37/80 Linfeng_091311_rIgG_4.raw High TGGLEIDSDFGGFR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 150 3.19 0.00 0 6 25 2 735.84546 1470.68364 -1.63 38.05 4472 4472 MS2 21/26 Linfeng_091311_rIgG_4.raw High DGEQHEDLNEVAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 101 3.15 0.00 0 21 25 3 495.22644 1483.66477 -0.84 20.32 2094 2094 MS2 25/48 Linfeng_091311_rIgG_4.raw High AALSASEGEEVPQDK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 193 3.00 0.00 0 1 25 2 765.86530 1530.72331 -3.25 22.79 2437 2437 MS2 23/28 Linfeng_091311_rIgG_4.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 219 2.94 0.00 0 4 25 2 634.30981 1267.61235 -3.28 22.34 2374 2374 MS2 17/20 Linfeng_091311_rIgG_4.raw High ISGLGLTPEQK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 510 2.74 0.00 0 6 22 2 571.82281 1142.63835 -2.86 27.99 3156 3156 MS2 16/20 Linfeng_091311_rIgG_4.raw High ALGTEVIQLFPEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 382 2.73 0.00 0 10 20 2 722.90521 1444.80315 -1.06 40.57 4792 4792 MS2 19/24 Linfeng_091311_rIgG_4.raw High SATEQSGTGIR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 375 2.72 0.00 0 45 25 2 553.77509 1106.54289 -0.72 14.86 1319 1319 MS2 17/20 Linfeng_091311_rIgG_4.raw High VETDHIVAAVGLEPNVELAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 356 2.62 0.00 0 10 25 3 702.04474 2104.11966 -4.23 35.51 4147 4147 MS2 27/76 Linfeng_091311_rIgG_4.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 221 2.41 0.00 0 35 25 2 634.30981 1267.61235 -3.28 22.44 2344 2344 MS2 16/20 Linfeng_091311_rIgG_5.raw High SATEQSGTGIR Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 383 2.16 0.00 0 44 25 2 553.77521 1106.54314 -0.50 15.25 1347 1347 MS2 15/20 Linfeng_091311_rIgG_5.raw High LNDGSQITYEK Unambiguous 3 1 IPI00000690.1 CID 1.0000 0.0000 1 1 219 2.15 0.00 0 9 25 2 634.31024 1267.61321 -2.61 22.60 2414 2414 MS2 14/20 Linfeng_091311_rIgG_6.raw High DGEQHEDLNEVAK Unambiguous 4 1 IPI00000690.1 CID 1.0000 0.0000 1 1 97 2.04 0.00 0 24 25 2 742.33551 1483.66374 -1.53 20.43 2110 2110 MS2 16/24 Linfeng_091311_rIgG_4.raw IPI00301323.1 ATP-dependent RNA helicase DDX18 30.45 2 14 14 26 27.63 16.12 7 10 17.22 10.60 6 6 30.77 12.24 6 10 670 75.4 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ANATVDGLEQGYVVcPSEK Unambiguous 1 1 IPI00301323.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 5.37 0.00 0 0 100 2 1018.98700 2036.96672 3.58 34.72 3650 3650 MS2 20/36 Linfeng_20120130_CHD1_4.raw High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 299 3.62 0.00 0 13 25 2 723.35797 1445.70867 2.28 32.96 3299 3299 MS2 19/22 Linfeng_122411_rIgG_4.raw High QIFNVNNLNLPQVALSFGFK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 256 3.57 0.00 0 29 25 3 755.07843 2263.22074 -1.20 51.49 6162 6162 MS2 34/76 Linfeng_091311_rIgG_4.raw High GLDIPEVDWIVQYDPPDDPKEYIHR Unambiguous 2 1 IPI00301323.1 CID 1.0000 0.0000 1 1 229 3.52 0.00 1 7 25 4 753.12097 3009.46206 -0.31 44.13 5239 5239 MS2 44/144 Linfeng_091311_rIgG_4.raw High TLAFLIPAVELIVK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 19 3.37 0.00 0 1 34 2 763.98352 1526.95976 2.65 55.31 7388 7388 MS2 19/26 Linfeng_20120130_CHD1_4.raw High TLAFLIPAVELIVK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 16 3.32 0.00 0 20 100 2 763.98242 1526.95757 1.22 55.30 8081 8081 MS2 21/26 Linfeng_20120130_CHD1_5.raw High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 263 3.27 0.00 0 12 25 2 723.35345 1445.69963 -3.97 34.14 3969 3969 MS2 19/22 Linfeng_091311_rIgG_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 563 3.08 0.00 0 23 25 2 580.81152 1160.61577 -0.02 4.61 541 541 MS2 16/18 Linfeng_122411_rIgG_4.raw High NGTGVLILSPTR Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 398 3.05 0.00 0 42 25 2 614.35736 1227.70745 1.49 30.49 2979 2979 MS2 18/22 Linfeng_122411_rIgG_4.raw High NLQcLVIDEADR Unambiguous 2 1 IPI00301323.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 485 3.03 0.00 0 34 100 2 723.35944 1445.71160 4.30 41.13 4907 4907 MS2 15/22 Linfeng_20120130_CHD1_4.raw High ILDVGFEEELK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 554 2.84 0.00 0 32 100 2 646.34509 1291.68291 3.74 45.12 5757 5757 MS2 16/20 Linfeng_20120130_CHD1_4.raw High VPPFVDLNVNSNEGK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 498 2.84 0.00 0 12 100 2 814.91998 1628.83269 2.91 41.51 4975 4975 MS2 15/28 Linfeng_20120130_CHD1_4.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 245 2.75 0.00 0 12 25 2 721.35571 1441.70415 2.97 40.36 4232 4232 MS2 19/22 Linfeng_122411_rIgG_4.raw Medium YHYELLNYIDLPVLAIHGK Unambiguous 2 1 IPI00301323.1 CID 1.0000 0.0000 1 1 329 2.73 0.00 0 0 25 4 568.55896 2271.21401 -1.44 45.16 5369 5369 MS2 36/108 Linfeng_091311_rIgG_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 491 2.71 0.00 0 7 25 2 580.80957 1160.61186 -3.38 26.28 2920 2920 MS2 16/18 Linfeng_091311_rIgG_4.raw High LGNGINIIVATPGR Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 145 2.69 0.00 0 10 25 2 697.91046 1394.81365 1.54 33.25 3337 3337 MS2 20/26 Linfeng_122411_rIgG_4.raw High ELAmQTFGVLK Unambiguous 1 1 IPI00301323.1 M4(Oxidation) CID 1.0000 0.0000 1 1 525 2.63 0.00 0 24 100 2 626.83630 1252.66533 3.73 38.45 4370 4370 MS2 13/20 Linfeng_20120130_CHD1_4.raw High ISDIQSQLEK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 476 2.62 0.00 0 33 25 2 580.80957 1160.61186 -3.38 26.47 2920 2920 MS2 16/18 Linfeng_091311_rIgG_9.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 211 2.51 0.00 0 19 25 2 721.35248 1441.69768 -1.52 41.49 4908 4908 MS2 19/22 Linfeng_091311_rIgG_4.raw High ELAmQTFGVLK Unambiguous 1 1 IPI00301323.1 M4(Oxidation) CID 1.0000 0.0000 1 1 497 2.48 0.00 0 21 100 2 626.83618 1252.66509 3.54 38.15 4316 4316 MS2 13/20 Linfeng_20120130_CHD1_4.raw High ELAmQTFGVLK Unambiguous 1 1 IPI00301323.1 M4(Oxidation) CID 1.0000 0.0000 1 1 523 2.48 0.00 0 13 100 2 626.83636 1252.66545 3.83 38.30 4343 4343 MS2 15/20 Linfeng_20120130_CHD1_4.raw High GGGGGFGYQK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 105 2.45 0.00 0 18 25 2 464.21820 927.42912 -3.05 19.55 1983 1983 MS2 13/18 Linfeng_091311_rIgG_4.raw High ELAmQTFGVLK Unambiguous 1 1 IPI00301323.1 M4(Oxidation) CID 1.0000 0.0000 1 1 510 2.42 0.00 0 25 100 2 626.83624 1252.66521 3.63 38.19 4323 4323 MS2 12/20 Linfeng_20120130_CHD1_4.raw High GGGGGFGYQK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 103 2.18 0.00 0 23 25 2 464.21799 927.42870 -3.51 19.87 1996 1996 MS2 12/18 Linfeng_091311_rIgG_9.raw High VPLSEFDFSWSK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 210 2.07 0.00 0 23 25 2 721.35229 1441.69731 -1.77 41.75 4907 4907 MS2 19/22 Linfeng_091311_rIgG_9.raw High ILDVGFEEELK Unambiguous 1 1 IPI00301323.1 CID 1.0000 0.0000 1 1 421 2.03 0.00 0 24 25 2 646.34351 1291.67974 1.28 36.03 3689 3689 MS2 16/20 Linfeng_122411_rIgG_4.raw IPI00967562.1 Putative uncharacterized protein HNRNPD 30.36 10 1 4 7 0.00 17.20 30.36 4 7 0.00 112 12.6 8.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFVGGLSPDTPEEK Unambiguous 9 1 IPI00967562.1 CID 1.0000 0.0000 1 1 408 2.90 0.00 0 6 8 2 744.88190 1488.75652 -1.08 30.17 3056 3056 MS2 20/26 Linfeng_122411_rIgG_5.raw High FGEVVDcTLK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High FGEVVDcTLK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High SRGFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 475 2.50 0.00 1 10 25 3 386.55405 1157.64759 0.81 36.54 3804 3804 MS2 21/36 Linfeng_122411_rIgG_6.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 500 2.18 0.00 0 1 5 2 457.76004 914.51280 -0.76 41.28 4584 4584 MS2 13/14 Linfeng_122411_rIgG_5.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 3 25 2 457.76132 914.51537 2.04 41.26 4391 4391 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTLK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw IPI00154742.6 IGL@ protein 30.34 14 5 5 14 37.01 30.34 5 14 234 24.8 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SYScQVTHEGSTVEK Unambiguous 14 1 IPI00154742.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 97 3.82 0.00 0 6 25 2 856.38104 1711.75481 -2.59 19.07 1961 1961 MS2 22/28 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 259 3.69 0.00 0 27 21 2 872.43030 1743.85332 -3.18 38.64 4602 4602 MS2 22/28 Linfeng_091311_rIgG_8.raw High SYScQVTHEGSTVEK Unambiguous 14 1 IPI00154742.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 104 3.49 0.00 0 0 25 2 856.38245 1711.75762 -0.95 19.01 1990 1990 MS2 20/28 Linfeng_091311_rIgG_10.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 248 2.91 0.00 0 19 25 2 872.42963 1743.85198 -3.95 38.57 4662 4662 MS2 19/28 Linfeng_091311_rIgG_10.raw High ATLVcLISDFYPGAVTVAWK Unambiguous 14 1 IPI00154742.6 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 348 2.77 0.00 0 29 25 3 737.72241 2211.15268 0.34 53.28 6460 6460 MS2 34/76 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 295 2.68 0.00 0 40 25 3 581.95599 1743.85343 -3.12 38.67 4606 4606 MS2 26/56 Linfeng_091311_rIgG_8.raw High YAASSYLSLTPEQWK Unambiguous 14 1 IPI00154742.6 CID 1.0000 0.0000 1 1 297 2.52 0.00 0 35 25 3 581.95605 1743.85361 -3.02 38.50 4653 4653 MS2 24/56 Linfeng_091311_rIgG_10.raw High ITcGGNNIGSK Unambiguous 1 1 IPI00154742.6 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 307 2.30 0.00 0 33 25 2 560.77332 1120.53935 -1.99 16.64 1616 1616 MS2 16/20 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 476 2.29 0.00 0 38 25 2 495.75787 990.50847 -1.81 15.21 1395 1395 MS2 12/18 Linfeng_091311_rIgG_6.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 493 2.21 0.00 0 9 25 2 495.75797 990.50865 -1.62 14.85 1362 1362 MS2 15/18 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 527 2.11 0.00 0 51 25 2 495.75818 990.50908 -1.19 14.79 1353 1353 MS2 13/18 Linfeng_091311_rIgG_8.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 537 2.09 0.00 0 35 25 2 495.75839 990.50951 -0.76 15.06 1320 1320 MS2 13/18 Linfeng_091311_rIgG_9.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 472 2.07 0.00 0 47 25 2 495.75745 990.50762 -2.67 15.02 1383 1383 MS2 12/18 Linfeng_091311_rIgG_2.raw High AGVETTTPSK Unambiguous 10 1 IPI00154742.6 CID 1.0000 0.0000 1 1 554 2.05 0.00 0 90 25 2 495.76010 990.51293 2.69 14.46 1276 1276 MS2 12/18 Linfeng_091311_rIgG_3.raw IPI00414101.4 Isoform 2 of DNA topoisomerase 2-alpha 29.93 7 36 41 119 136.43 19.85 27 45 154.07 22.61 27 46 96.13 13.17 16 28 1557 177.4 8.75 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDDANDAGGRNSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 6.52 0.00 1 0 25 3 908.42145 2723.24979 2.64 28.86 2652 2652 MS2 40/100 Linfeng_122411_rIgG_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 266 5.23 0.00 0 6 25 3 985.82629 2955.46433 -0.67 49.29 5962 5962 MS2 34/96 Linfeng_091311_rIgG_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 346 5.20 0.00 0 6 100 2 835.89984 1670.79241 0.91 44.07 5161 5161 MS2 20/30 Linfeng_20120130_CHD1_2.raw High KLLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 295 5.00 0.00 1 15 25 3 1028.52173 3083.55063 -3.45 45.05 5425 5425 MS2 30/100 Linfeng_091311_rIgG_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 336 4.97 0.00 0 5 100 2 835.89935 1670.79143 0.33 43.98 5138 5138 MS2 21/30 Linfeng_20120130_CHD1_2.raw High LLGLPEDYLYGQTTTYLTYNDFINK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 274 4.83 0.00 0 24 25 3 985.82709 2955.46671 0.14 49.28 5889 5889 MS2 32/96 Linfeng_091311_rIgG_3.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 364 4.77 0.00 0 0 100 2 835.89819 1670.78911 -1.06 43.72 5074 5074 MS2 19/30 Linfeng_20120130_CHD1_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 310 4.61 0.00 1 3 25 3 762.70544 2286.10178 -3.46 28.07 3210 3210 MS2 41/80 Linfeng_091311_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 249 4.59 0.00 0 8 100 2 1022.97308 2044.93889 4.03 32.93 2748 2748 MS2 22/36 Linfeng_20120130_CHD1_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 365 4.56 0.00 0 3 16 3 542.95526 1626.85123 1.58 36.63 3648 3648 MS2 33/56 Linfeng_122411_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 4.52 0.00 0 11 25 2 865.47235 1729.93743 3.92 53.37 5748 5748 MS2 21/30 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 4.49 0.00 0 1 25 2 869.91248 1738.81767 0.71 28.62 2620 2620 MS2 23/30 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 512 4.40 0.00 1 6 100 3 762.71008 2286.11570 2.63 31.33 2468 2468 MS2 31/80 Linfeng_20120130_CHD1_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 355 4.34 0.00 0 30 25 2 903.95526 1806.90325 1.33 53.51 6475 6475 MS2 24/30 Linfeng_091311_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 4.29 0.00 0 16 100 2 869.91595 1738.82463 4.71 32.53 2672 2672 MS2 23/30 Linfeng_20120130_CHD1_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 360 4.21 0.00 0 23 25 2 903.95776 1806.90825 4.10 52.43 5637 5637 MS2 22/30 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 401 4.17 0.00 0 14 25 3 643.00342 1926.99570 1.89 42.06 4336 4336 MS2 29/64 Linfeng_122411_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 129 4.10 0.00 0 0 25 2 1022.97180 2044.93633 2.78 29.18 2695 2695 MS2 23/36 Linfeng_122411_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 195 4.08 0.00 0 4 25 2 869.91119 1738.81511 -0.77 28.73 2604 2604 MS2 23/30 Linfeng_122411_rIgG_3.raw High MYVPALIFGQLLTSSNYDDDEK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 271 4.06 0.00 0 9 25 3 840.40826 2519.21024 3.62 51.64 5546 5546 MS2 34/84 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 334 4.03 0.00 0 7 25 2 964.00171 1926.99614 2.12 42.09 4340 4340 MS2 20/32 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 318 4.00 0.00 1 3 25 3 762.71069 2286.11753 3.43 23.62 1964 1964 MS2 38/80 Linfeng_122411_rIgG_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 409 3.97 0.00 0 25 25 3 642.99994 1926.98526 -3.52 42.94 5160 5160 MS2 29/64 Linfeng_091311_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 373 3.96 0.00 0 34 25 3 602.97076 1806.89774 -1.72 61.01 7165 7165 MS2 28/60 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 454 3.95 0.00 0 3 13 2 731.38464 1461.76201 2.43 36.62 3646 3646 MS2 20/24 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 3.92 0.00 0 5 25 3 542.95251 1626.84299 -3.49 37.62 4475 4475 MS2 34/56 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 661 3.90 0.00 0 5 100 2 731.38611 1461.76494 4.43 45.91 5603 5603 MS2 20/24 Linfeng_20120130_CHD1_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 368 3.89 0.00 0 41 25 2 903.95734 1806.90740 3.62 52.31 5628 5628 MS2 17/30 Linfeng_122411_rIgG_3.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 622 3.83 0.00 0 24 100 2 694.36707 1387.72685 3.75 26.69 1801 1801 MS2 18/22 Linfeng_20120130_CHD1_2.raw High YSGPEDDAAISLAFSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 200 3.83 0.00 0 3 25 2 835.90002 1670.79277 1.13 35.80 3543 3543 MS2 22/30 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 305 3.78 0.00 0 3 22 2 813.92932 1626.85137 1.66 36.64 3649 3649 MS2 21/28 Linfeng_122411_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 3.76 0.00 0 25 25 3 577.31696 1729.93631 3.28 53.40 5751 5751 MS2 32/60 Linfeng_122411_rIgG_2.raw High NENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 149 3.73 0.00 0 12 25 3 682.31647 2044.93485 2.05 29.16 2692 2692 MS2 33/72 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 299 3.70 0.00 0 13 25 2 813.92926 1626.85124 1.59 36.71 3633 3633 MS2 20/28 Linfeng_122411_rIgG_3.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 392 3.68 0.00 0 30 25 3 602.97192 1806.90122 0.20 53.45 6467 6467 MS2 31/60 Linfeng_091311_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 400 3.68 0.00 0 23 25 2 731.38110 1461.75493 -2.42 37.61 4474 4474 MS2 20/24 Linfeng_091311_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 3.62 0.00 0 44 25 3 602.97363 1806.90635 3.04 52.24 5620 5620 MS2 28/60 Linfeng_122411_rIgG_3.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 380 3.60 0.00 0 37 25 2 865.47186 1729.93645 3.35 54.39 6558 6558 MS2 22/30 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 606 3.57 0.00 0 28 100 2 694.36761 1387.72795 4.54 26.32 1759 1759 MS2 20/22 Linfeng_20120130_CHD1_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 632 3.51 0.00 0 32 100 2 694.36639 1387.72551 2.78 26.84 1818 1818 MS2 19/22 Linfeng_20120130_CHD1_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 485 3.47 0.00 0 4 3 3 463.24533 1387.72144 -0.15 3.81 399 399 MS2 25/44 Linfeng_122411_rIgG_2.raw High MQSLDKDIVALMVR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 508 3.46 0.00 1 14 25 3 540.29431 1618.86838 1.71 40.56 4146 4146 MS2 26/52 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 584 3.41 0.00 0 36 100 2 694.36725 1387.72722 4.01 26.66 1798 1798 MS2 19/22 Linfeng_20120130_CHD1_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 512 3.39 0.00 0 13 25 3 463.24625 1387.72419 1.83 24.96 2130 2130 MS2 25/44 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 682 3.39 0.00 0 24 100 2 731.38647 1461.76567 4.93 45.50 5506 5506 MS2 19/24 Linfeng_20120130_CHD1_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 299 3.38 0.00 0 32 25 2 813.92493 1626.84258 -3.74 37.59 4472 4472 MS2 19/28 Linfeng_091311_rIgG_2.raw High QImENAEINNIIK Unambiguous 12 2 IPI00414101.4;IPI00217709.1 M3(Oxidation) CID 1.0000 0.0000 1 1 595 3.36 0.00 0 31 100 2 773.40399 1545.80071 4.21 36.66 3484 3484 MS2 13/24 Linfeng_20120130_CHD1_2.raw High VTIDPENNLISIWNNGK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 323 3.34 0.00 0 30 25 2 963.99677 1926.98625 -3.01 43.03 5171 5171 MS2 20/32 Linfeng_091311_rIgG_2.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 335 3.33 0.00 0 13 100 2 564.84271 1128.67815 4.03 37.86 3748 3748 MS2 18/22 Linfeng_20120130_CHD1_2.raw High RDPALNSGVSQKPDPAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 379 3.31 0.00 1 25 25 3 593.98145 1779.92978 -2.86 17.79 1772 1772 MS2 31/64 Linfeng_091311_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 394 3.29 0.00 0 27 100 2 869.91571 1738.82414 4.43 32.35 2634 2634 MS2 16/30 Linfeng_20120130_CHD1_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 502 3.29 0.00 0 2 9 3 487.92520 1461.76105 1.77 36.62 3647 3647 MS2 33/48 Linfeng_122411_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 544 3.28 0.00 0 15 100 2 718.85754 1436.70781 4.28 42.17 4697 4697 MS2 16/22 Linfeng_20120130_CHD1_2.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 543 3.23 0.00 0 12 100 2 638.81915 1276.63103 3.34 35.88 3320 3320 MS2 18/22 Linfeng_20120130_CHD1_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 593 3.22 0.00 0 10 100 2 694.36676 1387.72624 3.31 25.47 1662 1662 MS2 17/22 Linfeng_20120130_CHD1_2.raw High DPALNSGVSQKPDPAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 414 3.21 0.00 0 5 24 3 541.94775 1623.82871 -3.11 20.19 2110 2110 MS2 26/60 Linfeng_091311_rIgG_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 355 3.20 0.00 0 2 25 2 765.40430 1529.80132 1.33 33.56 3261 3261 MS2 21/24 Linfeng_122411_rIgG_2.raw High SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 171 3.17 0.00 1 5 25 4 991.24561 3961.96059 1.28 36.97 3692 3692 MS2 34/222 Linfeng_122411_rIgG_2.raw High EWLLGMLGAESAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 391 3.12 0.00 0 20 25 2 702.86493 1404.72258 2.37 43.72 4544 4544 MS2 21/24 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 3.06 0.00 0 5 25 3 487.92535 1461.76151 2.08 36.58 3616 3616 MS2 29/48 Linfeng_122411_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 435 3.05 0.00 0 1 16 3 487.92239 1461.75263 -3.99 37.66 4481 4481 MS2 31/48 Linfeng_091311_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 609 3.05 0.00 0 29 100 2 694.36761 1387.72795 4.54 26.42 1769 1769 MS2 17/22 Linfeng_20120130_CHD1_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 513 3.03 0.00 0 20 100 2 614.82336 1228.63945 3.22 28.43 2043 2043 MS2 15/20 Linfeng_20120130_CHD1_2.raw High LmDGEEPLPmLPSYK Unambiguous 7 1 IPI00414101.4 M2(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 384 3.02 0.00 0 6 100 2 876.41919 1751.83110 4.55 39.20 4026 4026 MS2 18/28 Linfeng_20120130_CHD1_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 227 3.01 0.00 0 26 25 3 580.27722 1738.81711 0.38 28.65 2624 2624 MS2 29/60 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 393 3.00 0.00 0 8 25 2 694.36023 1387.71318 -6.10 25.85 2905 2905 MS2 20/22 Linfeng_091311_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 122 2.97 0.00 0 7 11 2 622.28564 1243.56401 1.32 3.17 300 300 MS2 17/20 Linfeng_122411_rIgG_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 528 2.97 0.00 0 9 100 2 614.82300 1228.63872 2.62 29.44 2171 2171 MS2 15/20 Linfeng_20120130_CHD1_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 299 2.94 0.00 0 29 16 2 718.85217 1436.69707 -3.20 35.48 4198 4198 MS2 19/22 Linfeng_091311_rIgG_2.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 372 2.90 0.00 0 17 25 2 638.81793 1276.62859 1.42 30.40 2854 2854 MS2 19/22 Linfeng_122411_rIgG_2.raw High TQMAEVLPSPR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 338 2.88 0.00 0 39 25 2 614.82263 1228.63799 2.02 25.72 2230 2230 MS2 18/20 Linfeng_122411_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 108 2.88 0.00 0 10 25 2 622.28333 1243.55937 -2.41 23.10 2480 2480 MS2 15/20 Linfeng_091311_rIgG_4.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 312 2.88 0.00 1 11 25 3 762.70660 2286.10526 -1.94 28.13 3181 3181 MS2 28/80 Linfeng_091311_rIgG_3.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 428 2.87 0.00 0 15 15 3 463.24207 1387.71164 -7.21 25.91 2913 2913 MS2 23/44 Linfeng_091311_rIgG_2.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 339 2.85 0.00 0 13 10 2 564.83844 1128.66960 -3.54 32.71 3833 3833 MS2 21/22 Linfeng_091311_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 98 2.84 0.00 0 15 25 2 622.28229 1243.55730 -4.08 22.90 2491 2491 MS2 17/20 Linfeng_091311_rIgG_2.raw High KYDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 298 2.84 0.00 1 10 25 3 412.56940 1235.69364 -4.71 37.39 4446 4446 MS2 21/36 Linfeng_091311_rIgG_2.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 374 2.83 0.00 0 19 25 2 865.47339 1729.93950 5.12 53.26 5739 5739 MS2 17/30 Linfeng_122411_rIgG_3.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 311 2.81 0.00 0 20 25 2 564.84088 1128.67449 0.78 31.20 2959 2959 MS2 21/22 Linfeng_122411_rIgG_2.raw High EDLATFIEELEAVEAK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 381 2.74 0.00 0 38 25 3 602.97308 1806.90470 2.13 53.53 6356 6356 MS2 26/60 Linfeng_091311_rIgG_3.raw High AAIGcGIVESILNWVK Unambiguous 4 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.74 0.00 0 8 25 3 577.31726 1729.93723 3.81 54.34 6553 6553 MS2 22/60 Linfeng_091311_rIgG_2.raw High NSTEcTLILTEGDSAK Unambiguous 7 1 IPI00414101.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 2.72 0.00 0 37 25 3 580.27521 1738.81107 -3.09 30.41 3528 3528 MS2 25/60 Linfeng_091311_rIgG_2.raw High TPPLITDYR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 730 2.68 0.00 0 7 100 2 538.29474 1075.58220 3.65 31.28 2461 2461 MS2 14/16 Linfeng_20120130_CHD1_2.raw High GSVPLSSSPPATHFPDETEITNPVPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 575 2.67 0.00 0 4 100 3 902.12445 2704.35880 4.52 39.32 4052 4052 MS2 27/100 Linfeng_20120130_CHD1_2.raw High RAYDIAGSTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 327 2.66 0.00 1 10 25 2 541.28375 1081.56023 -3.20 18.04 1807 1807 MS2 17/18 Linfeng_091311_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 37 25 2 718.85248 1436.69768 -2.77 35.58 4165 4165 MS2 16/22 Linfeng_091311_rIgG_3.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 537 2.66 0.00 0 18 100 2 718.85699 1436.70671 3.52 42.30 4361 4361 MS2 14/22 Linfeng_20120130_CHD1_3.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 324 2.63 0.00 0 7 25 3 376.89645 1128.67481 1.07 31.33 2976 2976 MS2 22/44 Linfeng_122411_rIgG_2.raw High IKNENTEGSPQEDGVELEGLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 310 2.62 0.00 1 12 25 3 762.71033 2286.11643 2.95 22.62 1853 1853 MS2 24/80 Linfeng_122411_rIgG_2.raw High YDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 345 2.59 0.00 0 5 25 2 554.30719 1107.60710 2.36 40.62 4153 4153 MS2 15/16 Linfeng_122411_rIgG_2.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 4 25 2 668.38293 1335.75859 1.99 41.95 4322 4322 MS2 16/20 Linfeng_122411_rIgG_2.raw High YIFTMLSSLAR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 488 2.54 0.00 0 14 25 2 651.35187 1301.69646 3.22 43.29 4491 4491 MS2 18/20 Linfeng_122411_rIgG_2.raw High TPPLITDYREYHTDTTVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 394 2.54 0.00 1 7 25 3 717.36517 2150.08097 2.09 28.07 2546 2546 MS2 23/68 Linfeng_122411_rIgG_2.raw High YDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 259 2.50 0.00 0 4 25 2 554.30457 1107.60185 -2.38 41.59 4987 4987 MS2 15/16 Linfeng_091311_rIgG_2.raw High KYDTVLDILR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 296 2.49 0.00 1 17 25 2 618.35046 1235.69365 -4.70 37.37 4443 4443 MS2 17/18 Linfeng_091311_rIgG_2.raw High TLAVSGLGVVGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 325 2.49 0.00 0 30 25 2 564.84021 1128.67314 -0.41 31.34 3091 3091 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 293 2.48 0.00 0 4 14 2 668.37988 1335.75249 -2.58 43.01 5168 5168 MS2 16/20 Linfeng_091311_rIgG_2.raw Medium GSVPLSSSPPATHFPDETEITNPVPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 307 2.47 0.00 0 1 25 3 902.12347 2704.35587 3.44 32.50 3128 3128 MS2 33/100 Linfeng_122411_rIgG_2.raw High HVDYVADQIVTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 485 2.44 0.00 0 80 25 2 694.36542 1387.72356 1.37 24.93 2125 2125 MS2 16/22 Linfeng_122411_rIgG_2.raw High SFGSTcQLSEK Unambiguous 5 1 IPI00414101.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 104 2.42 0.00 0 16 25 2 622.28308 1243.55889 -2.81 23.00 2472 2472 MS2 15/20 Linfeng_091311_rIgG_3.raw High DKLDETGNSLK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 400 2.41 0.00 1 55 25 2 610.31091 1219.61455 -1.62 19.60 2028 2028 MS2 17/20 Linfeng_091311_rIgG_2.raw High YIFTMLSSLAR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 466 2.40 0.00 0 43 25 2 651.34875 1301.69023 -1.57 44.18 5315 5315 MS2 17/20 Linfeng_091311_rIgG_2.raw High GFQQISFVNSIATSK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 340 2.38 0.00 0 38 25 2 813.92548 1626.84368 -3.06 37.66 4429 4429 MS2 17/28 Linfeng_091311_rIgG_3.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 336 2.37 0.00 0 14 25 2 638.81573 1276.62419 -2.02 31.54 3678 3678 MS2 19/22 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 316 2.32 0.00 0 8 25 2 491.75616 982.50505 2.43 28.42 2594 2594 MS2 13/14 Linfeng_122411_rIgG_2.raw High AQVQLNK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 346 2.32 0.00 0 17 25 2 400.73386 800.46044 -2.59 16.39 1575 1575 MS2 11/12 Linfeng_091311_rIgG_2.raw High DKYGVFPLR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 353 2.30 0.00 1 12 100 2 547.80487 1094.60246 2.84 37.75 3725 3725 MS2 12/16 Linfeng_20120130_CHD1_2.raw High LDDANDAGGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 51 2.23 0.00 0 45 25 2 502.22552 1003.44377 -0.22 12.80 1046 1046 MS2 14/18 Linfeng_091311_rIgG_4.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 280 2.22 0.00 0 9 25 2 668.38086 1335.75444 -1.11 43.15 5120 5120 MS2 15/20 Linfeng_091311_rIgG_3.raw High DKYGVFPLR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 296 2.17 0.00 1 12 25 2 547.80396 1094.60063 1.17 29.96 2797 2797 MS2 15/16 Linfeng_122411_rIgG_2.raw High LDDANDAGGR Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 64 2.17 0.00 0 35 25 2 502.22467 1003.44206 -1.92 13.49 1165 1165 MS2 15/18 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.15 0.00 0 5 25 2 491.75320 982.49913 -3.60 30.35 3521 3521 MS2 13/14 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.13 0.00 0 37 100 2 491.75668 982.50609 3.49 31.08 2423 2423 MS2 13/14 Linfeng_20120130_CHD1_2.raw High SPSDLWK Unambiguous 11 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 404 2.07 0.00 0 9 25 2 416.71194 832.41661 -4.05 28.00 3200 3200 MS2 10/12 Linfeng_091311_rIgG_2.raw High SVVSDLEADDVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 542 2.07 0.00 0 100 100 2 638.81873 1276.63017 2.67 35.79 3298 3298 MS2 16/22 Linfeng_20120130_CHD1_2.raw High FLEEFITPIVK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 277 2.07 0.00 0 11 25 2 668.38324 1335.75920 2.45 42.00 4315 4315 MS2 14/20 Linfeng_122411_rIgG_3.raw High RAYDIAGSTK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 369 2.06 0.00 1 15 25 2 541.28381 1081.56035 -3.09 17.93 1766 1766 MS2 17/18 Linfeng_091311_rIgG_3.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 306 2.03 0.00 0 44 25 2 491.75452 982.50176 -0.92 28.48 2570 2570 MS2 13/14 Linfeng_122411_rIgG_3.raw High IIIENKPK Unambiguous 7 1 IPI00414101.4 CID 1.0000 0.0000 1 1 79 2.00 0.00 0 17 25 2 477.80130 954.59532 -3.11 17.77 1769 1769 MS2 12/14 Linfeng_091311_rIgG_2.raw IPI00008557.6 Insulin-like growth factor 2 mRNA-binding protein 1 29.64 2 12 13 28 38.98 25.65 11 13 28.54 15.60 6 9 21.76 12.82 5 6 577 63.4 9.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 287 5.18 0.00 0 15 100 2 927.01440 1853.02153 4.72 46.96 6161 6161 MS2 24/32 Linfeng_20120130_CHD1_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 510 4.58 0.00 0 20 100 2 938.49225 1875.97722 3.90 44.47 5614 5614 MS2 23/32 Linfeng_20120130_CHD1_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 345 4.33 0.00 0 8 25 2 938.48688 1875.96648 -1.83 37.23 4368 4368 MS2 24/32 Linfeng_091311_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 271 4.30 0.00 0 3 22 3 618.34399 1853.01743 2.50 37.23 3841 3841 MS2 38/64 Linfeng_122411_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 335 4.12 0.00 0 75 25 3 621.66803 1862.98954 1.96 41.05 4319 4319 MS2 32/60 Linfeng_122411_rIgG_4.raw High LLVPTQYVGAIIGK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 108 3.86 0.00 0 7 25 3 491.29971 1471.88459 -2.55 42.75 5066 5066 MS2 28/52 Linfeng_091311_rIgG_4.raw High VSYIPDEQIAQGPENGR Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 452 3.84 0.00 0 6 100 2 936.96057 1872.91387 2.75 33.01 3263 3263 MS2 17/32 Linfeng_20120130_CHD1_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 353 3.71 0.00 0 2 25 3 621.66583 1862.98294 -1.58 42.18 4994 4994 MS2 32/60 Linfeng_091311_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 307 3.69 0.00 0 22 25 3 618.34076 1853.00772 -2.73 38.40 4516 4516 MS2 35/64 Linfeng_091311_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 319 3.63 0.00 0 14 25 2 931.99512 1862.98296 -1.57 42.17 4993 4993 MS2 19/30 Linfeng_091311_rIgG_4.raw High ITISSLQDLTLYNPER Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 332 3.54 0.00 0 24 25 2 931.99890 1862.99053 2.49 41.09 4324 4324 MS2 20/30 Linfeng_122411_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 366 3.50 0.00 0 4 25 2 938.49133 1875.97539 2.92 36.36 3730 3730 MS2 19/32 Linfeng_122411_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 248 3.44 0.00 0 2 25 2 927.01288 1853.01848 3.07 37.30 3849 3849 MS2 22/32 Linfeng_122411_rIgG_4.raw High TVNELQNLTAAEVVVPR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 286 3.29 0.00 0 10 25 2 927.00787 1853.00847 -2.33 38.46 4524 4524 MS2 22/32 Linfeng_091311_rIgG_4.raw High mVIITGPPEAQFK Unambiguous 4 2 IPI00008557.6;IPI00658000.3 M1(Oxidation) CID 1.0000 0.0000 1 1 622 3.06 0.00 0 21 100 2 723.88995 1446.77263 4.45 36.18 3940 3940 MS2 17/24 Linfeng_20120130_CHD1_4.raw High mVIITGPPEAQFK Unambiguous 4 2 IPI00008557.6;IPI00658000.3 M1(Oxidation) CID 1.0000 0.0000 1 1 630 2.99 0.00 0 26 100 2 723.88959 1446.77190 3.94 36.26 3955 3955 MS2 16/24 Linfeng_20120130_CHD1_4.raw High AISVHSTPEGcSSAcK Unambiguous 1 1 IPI00008557.6 C11(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 101 2.92 0.00 0 2 25 3 564.25439 1690.74863 -2.23 18.42 1824 1824 MS2 31/60 Linfeng_091311_rIgG_4.raw High LYIGNLNESVTPADLEK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 368 2.85 0.00 0 8 25 3 625.99603 1875.97354 1.94 36.35 3729 3729 MS2 26/64 Linfeng_122411_rIgG_4.raw High RLEIEHSVPK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 334 2.59 0.00 1 17 25 3 403.23035 1207.67649 -2.41 20.50 2119 2119 MS2 20/36 Linfeng_091311_rIgG_4.raw High DQTPDENDQVIVK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 169 2.49 0.00 0 7 25 2 750.86041 1500.71355 -2.77 24.30 2648 2648 MS2 19/24 Linfeng_091311_rIgG_4.raw High DQTPDENDQVIVK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 194 2.38 0.00 0 28 9 2 750.86218 1500.71709 -0.41 4.03 451 451 MS2 19/24 Linfeng_122411_rIgG_4.raw High LLVPTQYVGAIIGK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 60 2.24 0.00 0 9 25 2 736.45001 1471.89275 2.99 41.30 4350 4350 MS2 21/26 Linfeng_122411_rIgG_4.raw High TADEVPLK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 279 2.18 0.00 0 37 25 2 436.73862 872.46996 -2.82 21.26 2223 2223 MS2 12/14 Linfeng_091311_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw High VSYIPDEQIAQGPENGR Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 249 2.17 0.00 0 5 25 2 936.95483 1872.90239 -3.37 30.97 3556 3556 MS2 14/32 Linfeng_091311_rIgG_4.raw High ISYSGQFLVK Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 451 2.10 0.00 0 41 100 2 571.31793 1141.62859 2.95 37.11 4127 4127 MS2 15/18 Linfeng_20120130_CHD1_4.raw High VPASAAGR Unambiguous 2 1 IPI00008557.6 CID 1.0000 0.0000 1 1 224 2.06 0.00 0 53 25 2 364.70566 728.40404 -1.33 2.80 255 255 MS2 13/14 Linfeng_091311_rIgG_4.raw High QGSPVAAGAPAK Unambiguous 1 1 IPI00008557.6 CID 1.0000 0.0000 1 1 265 2.06 0.00 0 29 25 2 527.28699 1053.56670 -2.00 17.01 1624 1624 MS2 12/22 Linfeng_091311_rIgG_4.raw IPI00477971.4 Transducin beta-like protein 3 29.33 3 15 15 24 42.01 25.74 13 13 38.10 21.41 10 11 808 89.0 6.90 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SLEQEDQEDITAFDLSPDNEVLVTASR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 138 5.43 0.00 0 9 25 3 1007.80798 3021.40940 -2.60 42.21 5003 5003 MS2 40/104 Linfeng_091311_rIgG_3.raw High FLGPEDSHVVVASNSPcLK Unambiguous 3 1 IPI00477971.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 4.23 0.00 0 16 25 3 686.00897 2056.01236 -2.20 30.46 3497 3497 MS2 31/72 Linfeng_091311_rIgG_3.raw High ALLLAQWAWQEGSVTR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 407 4.11 0.00 0 35 25 3 610.32990 1828.97513 2.52 43.90 4562 4562 MS2 30/60 Linfeng_122411_rIgG_3.raw High NTAPDNGPILLQAQTTQR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 401 3.91 0.00 0 41 25 3 646.67426 1938.00821 2.17 29.03 2644 2644 MS2 26/68 Linfeng_122411_rIgG_3.raw High FLGPEDSHVVVASNSPcLK Unambiguous 3 1 IPI00477971.4 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 3.83 0.00 0 24 25 3 686.01117 2056.01896 1.00 29.43 2695 2695 MS2 28/72 Linfeng_122411_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 167 3.73 0.00 0 9 25 3 879.82172 2637.45060 4.51 48.21 5116 5116 MS2 30/96 Linfeng_122411_rIgG_3.raw High SLEQEDQEDITAFDLSPDNEVLVTASR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 177 3.64 0.00 0 3 25 3 1007.81342 3021.42569 2.79 41.45 4243 4243 MS2 27/104 Linfeng_122411_rIgG_3.raw High LDDHALTGASDSR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 178 3.62 0.00 0 10 25 3 453.21503 1357.63053 -2.79 21.80 2306 2306 MS2 29/48 Linfeng_091311_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 184 3.58 0.00 0 12 25 4 660.11652 2637.44423 2.10 48.27 5124 5124 MS2 32/144 Linfeng_122411_rIgG_3.raw High LLLFSSATDAAIR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 342 3.40 0.00 0 8 25 2 689.39160 1377.77593 1.61 38.10 3811 3811 MS2 22/24 Linfeng_122411_rIgG_3.raw High NTAPDNGPILLQAQTTQR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 402 3.30 0.00 0 16 25 3 646.67139 1937.99961 -2.27 30.58 3513 3513 MS2 30/68 Linfeng_091311_rIgG_3.raw High LKESFLVTGSQDcTVK Unambiguous 3 1 IPI00477971.4 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 390 3.19 0.00 1 48 25 3 604.64685 1811.92600 2.84 25.30 2149 2149 MS2 27/60 Linfeng_122411_rIgG_3.raw High GTQLLSSGSDGLVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 481 3.09 0.00 0 5 25 2 681.36841 1361.72954 1.75 28.01 2508 2508 MS2 21/26 Linfeng_122411_rIgG_3.raw High DVTEAEQAEEQAR Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 111 3.06 0.00 0 5 25 2 738.33246 1475.65764 -2.23 23.02 2475 2475 MS2 20/24 Linfeng_091311_rIgG_3.raw High TVPVFESVEAAVLLPEEPVSQLGVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 178 3.03 0.00 0 15 25 3 879.81885 2637.44199 1.25 49.36 5899 5899 MS2 29/96 Linfeng_091311_rIgG_3.raw High VNILEVASGAVLR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 282 2.97 0.00 0 18 25 2 670.89807 1340.78887 -0.62 43.47 5160 5160 MS2 19/24 Linfeng_091311_rIgG_3.raw High LWALQDFScLK Unambiguous 3 1 IPI00477971.4 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 2.95 0.00 0 38 25 2 690.85138 1380.69548 -1.89 43.04 5107 5107 MS2 18/20 Linfeng_091311_rIgG_3.raw High GTQLLSSGSDGLVK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 457 2.94 0.00 0 6 25 2 681.36603 1361.72478 -1.74 29.69 3393 3393 MS2 20/26 Linfeng_091311_rIgG_3.raw High VNILEVASGAVLR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 207 2.84 0.00 0 49 25 2 670.89984 1340.79241 2.02 42.42 4370 4370 MS2 20/24 Linfeng_122411_rIgG_3.raw High AALEALLPYTER Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 357 2.78 0.00 0 11 25 2 673.86938 1346.73149 -0.01 37.12 3685 3685 MS2 17/22 Linfeng_122411_rIgG_3.raw High ALLLAQWAWQEGSVTR Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 406 2.73 0.00 0 27 25 3 610.32678 1828.96579 -2.59 44.91 5341 5341 MS2 29/60 Linfeng_091311_rIgG_3.raw High DINSVAIAPNDK Unambiguous 3 1 IPI00477971.4 CID 1.0000 0.0000 1 1 321 2.67 0.00 0 21 25 2 628.82513 1256.64299 -4.12 26.71 2988 2988 MS2 17/22 Linfeng_091311_rIgG_3.raw High LPVPAAAPTPWETHK Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 477 2.59 0.00 0 26 25 3 538.95844 1614.86075 -1.97 31.36 3614 3614 MS2 23/56 Linfeng_091311_rIgG_3.raw High AALEALLPYTER Unambiguous 2 1 IPI00477971.4 CID 1.0000 0.0000 1 1 364 2.50 0.00 0 9 25 2 673.86798 1346.72869 -2.09 38.12 4488 4488 MS2 17/22 Linfeng_091311_rIgG_3.raw IPI00793930.1 TUBA1B protein 29.25 12 6 6 22 11.90 12.54 3 5 42.11 23.88 5 14 10.25 12.54 3 3 335 37.2 4.98 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LISQIVSSITASLR Unambiguous 6 1 IPI00793930.1 CID 1.0000 0.0000 1 1 162 4.34 0.00 0 7 65 2 744.44440 1487.88152 1.54 55.33 5879 5879 MS2 22/26 Linfeng_20120130_CHD1_6.raw High TIGGGDDSFNTFFSETGAGK Unambiguous 12 1 IPI00793930.1 CID 1.0000 0.0000 1 1 86 3.61 0.00 0 21 13 3 669.96942 2007.89371 0.28 38.73 4236 4236 MS2 31/76 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 424 3.60 0.00 0 4 25 3 567.97504 1701.91056 2.75 40.92 3940 3940 MS2 31/56 Linfeng_122411_rIgG_9.raw High LISQIVSSITASLR Unambiguous 6 1 IPI00793930.1 CID 1.0000 0.0000 1 1 136 3.54 0.00 0 0 25 3 496.63129 1487.87931 0.05 46.84 5316 5316 MS2 31/52 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 391 3.46 0.00 0 22 25 2 851.45856 1701.90984 2.33 40.81 4161 4161 MS2 20/28 Linfeng_122411_rIgG_3.raw High QLFHPEQLITGKEDAANNYAR Unambiguous 12 1 IPI00793930.1 CID 1.0000 0.0000 1 1 372 3.42 0.00 1 35 12 4 604.55652 2415.20424 -0.41 31.53 3244 3244 MS2 32/120 Linfeng_122411_rIgG_5.raw High VGINYQPPTVVPGGDLAK Unambiguous 4 1 IPI00793930.1 CID 1.0000 0.0000 1 1 348 3.27 0.00 0 33 100 2 913.00018 1824.99309 4.15 39.50 4994 4994 MS2 16/34 Linfeng_20120130_CHD1_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 455 3.24 0.00 0 11 9 3 567.97351 1701.90598 0.06 40.76 4514 4514 MS2 31/56 Linfeng_122411_rIgG_5.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 422 3.03 0.00 0 20 25 3 567.97449 1701.90891 1.78 40.80 4160 4160 MS2 28/56 Linfeng_122411_rIgG_3.raw High AVFVDLEPTVIDEVR Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 401 2.88 0.00 0 5 25 2 851.45929 1701.91130 3.19 40.91 3939 3939 MS2 21/28 Linfeng_122411_rIgG_9.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 463 2.76 0.00 0 4 9 2 508.29224 1015.57720 -1.08 27.60 2702 2702 MS2 16/18 Linfeng_122411_rIgG_5.raw High VGINYQPPTVVPGGDLAK Unambiguous 4 1 IPI00793930.1 CID 1.0000 0.0000 1 1 293 2.72 0.00 0 19 25 2 912.99396 1824.98064 -2.67 34.68 3979 3979 MS2 11/34 Linfeng_091311_rIgG_5.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 651 2.72 0.00 0 12 25 2 508.29370 1015.58013 1.81 28.81 2816 2816 MS2 16/18 Linfeng_122411_rIgG_6.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 793 2.64 0.00 0 27 100 2 508.29440 1015.58153 3.19 28.60 2478 2478 MS2 14/18 Linfeng_20120130_CHD1_5.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 670 2.53 0.00 0 32 25 2 508.29346 1015.57964 1.33 27.99 2505 2505 MS2 15/18 Linfeng_122411_rIgG_3.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 710 2.51 0.00 0 39 25 2 508.29416 1015.58104 2.71 25.51 1972 1972 MS2 16/18 Linfeng_122411_rIgG_9.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 513 2.49 0.00 0 17 25 2 508.29117 1015.57506 -3.18 30.15 3382 3382 MS2 14/18 Linfeng_091311_rIgG_5.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 628 2.46 0.00 0 21 25 2 508.29340 1015.57952 1.21 28.21 2679 2679 MS2 16/18 Linfeng_122411_rIgG_4.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 464 2.43 0.00 0 23 25 2 508.29147 1015.57567 -2.58 30.18 3439 3439 MS2 15/18 Linfeng_091311_rIgG_6.raw High DVNAAIATIK Unambiguous 9 1 IPI00793930.1 CID 1.0000 0.0000 1 1 684 2.35 0.00 0 47 25 2 508.29346 1015.57964 1.33 25.84 2086 2086 MS2 14/18 Linfeng_122411_rIgG_10.raw High LISQIVSSITASLR Unambiguous 6 1 IPI00793930.1 CID 1.0000 0.0000 1 1 121 2.24 0.00 0 24 25 2 744.44269 1487.87810 -0.76 48.35 5733 5733 MS2 19/26 Linfeng_091311_rIgG_5.raw High LISQIVSSITASLR Unambiguous 6 1 IPI00793930.1 CID 1.0000 0.0000 1 1 147 2.02 0.00 0 33 25 2 744.44342 1487.87956 0.22 48.48 5751 5751 MS2 18/26 Linfeng_091311_rIgG_7.raw IPI00745955.4 Probable rRNA-processing protein EBP2 29.08 4 8 8 8 21.45 29.08 8 8 306 34.8 10.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDVTLGPVPEIGGSEAPAPQNK Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 379 4.28 0.00 0 23 25 3 730.38531 2189.14139 -1.63 37.56 4392 4392 MS2 33/84 Linfeng_091311_rIgG_6.raw Medium GFSDKLDFLEGDQKPLAQR Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 392 2.99 0.00 1 17 25 4 541.78046 2164.10000 -1.58 35.09 4075 4075 MS2 34/108 Linfeng_091311_rIgG_6.raw High QAQAAVLAVLPR Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 136 2.61 0.00 0 25 25 2 618.87292 1236.73857 -3.06 35.00 4063 4063 MS2 19/22 Linfeng_091311_rIgG_6.raw High AVDPEDDFQR Unambiguous 3 1 IPI00745955.4 CID 1.0000 0.0000 1 1 100 2.54 0.00 0 0 25 2 596.26379 1191.52031 -6.22 25.70 2841 2841 MS2 16/18 Linfeng_091311_rIgG_6.raw High VQTEVLQK Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 498 2.39 0.00 0 33 25 2 472.77310 944.53893 -2.37 19.89 2046 2046 MS2 12/14 Linfeng_091311_rIgG_6.raw High DLEWVER Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 260 2.27 0.00 0 10 25 2 473.73367 946.46007 -3.01 32.80 3782 3782 MS2 10/12 Linfeng_091311_rIgG_6.raw High KVQTEVLQK Unambiguous 2 1 IPI00745955.4 CID 1.0000 0.0000 1 1 324 2.23 0.00 1 22 25 2 536.82056 1072.63384 -2.14 17.22 1674 1674 MS2 12/16 Linfeng_091311_rIgG_6.raw High KAVNDVNGLK Unambiguous 4 1 IPI00745955.4 CID 1.0000 0.0000 1 1 389 2.13 0.00 1 28 25 2 529.30292 1057.59856 -1.45 17.11 1660 1660 MS2 11/18 Linfeng_091311_rIgG_6.raw IPI00297211.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 28.80 4 30 30 63 86.57 22.72 24 31 65.29 17.68 16 21 36.00 7.41 6 11 1052 121.8 8.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 216 4.42 0.00 0 8 100 2 883.89752 1766.78777 3.55 26.40 1766 1766 MS2 20/28 Linfeng_20120130_CHD1_2.raw High IDEAESLNDEELEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 238 4.40 0.00 0 21 100 2 881.90057 1762.79387 4.12 27.90 1971 1971 MS2 21/28 Linfeng_20120130_CHD1_2.raw High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 82 4.35 0.00 0 0 25 2 883.89148 1766.77568 -3.29 28.12 3217 3217 MS2 22/28 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 331 4.25 0.00 0 24 100 2 867.40967 1733.81206 2.53 44.23 5201 5201 MS2 23/28 Linfeng_20120130_CHD1_2.raw High TEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 101 4.19 0.00 0 8 25 2 883.89697 1766.78667 2.92 25.11 2123 2123 MS2 21/28 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 261 4.17 0.00 0 11 25 3 618.96954 1854.89408 1.70 45.15 4723 4723 MS2 28/56 Linfeng_122411_rIgG_3.raw High LFELLEKEILFYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 285 3.96 0.00 1 19 25 3 571.66077 1712.96775 3.21 47.50 5026 5026 MS2 32/48 Linfeng_122411_rIgG_3.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 322 3.93 0.00 1 14 22 3 385.21689 1153.63611 -0.30 28.69 2599 2599 MS2 24/32 Linfeng_122411_rIgG_3.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 349 3.91 0.00 1 10 25 3 385.21594 1153.63327 -2.76 30.08 3484 3484 MS2 21/32 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 350 3.89 0.00 0 61 100 2 867.41046 1733.81365 3.45 44.59 5288 5288 MS2 19/28 Linfeng_20120130_CHD1_2.raw High IDEAESLNDEELEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 84 3.83 0.00 0 11 25 2 881.89453 1762.78179 -2.73 28.41 3256 3256 MS2 23/28 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 329 3.59 0.00 0 14 100 2 867.41010 1733.81291 3.02 37.44 3658 3658 MS2 21/28 Linfeng_20120130_CHD1_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 194 3.48 0.00 0 16 25 2 867.40894 1733.81059 1.69 36.71 3632 3632 MS2 24/28 Linfeng_122411_rIgG_3.raw High LRLDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 222 3.47 0.00 1 3 10 3 466.61276 1397.82373 0.96 30.88 2885 2885 MS2 23/44 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 252 3.38 0.00 0 25 25 3 618.96783 1854.88895 -1.07 46.04 5553 5553 MS2 24/56 Linfeng_091311_rIgG_2.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 203 3.36 0.00 0 17 25 2 867.40906 1733.81084 1.83 32.64 3115 3115 MS2 21/28 Linfeng_122411_rIgG_3.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 384 3.33 0.00 0 19 25 2 661.34973 1321.69219 1.68 33.17 3184 3184 MS2 16/20 Linfeng_122411_rIgG_3.raw High LDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 471 3.31 0.00 0 12 25 2 564.82037 1128.63347 -3.31 27.45 3124 3124 MS2 17/18 Linfeng_091311_rIgG_2.raw High EVEGKTPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 312 3.31 0.00 1 6 25 3 799.72638 2397.16458 1.50 43.49 4509 4509 MS2 26/76 Linfeng_122411_rIgG_3.raw High LRLDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 189 3.24 0.00 1 8 25 3 466.61057 1397.81714 -3.76 32.16 3760 3760 MS2 22/44 Linfeng_091311_rIgG_2.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 252 3.23 0.00 0 20 25 3 618.96747 1854.88785 -1.66 46.06 5485 5485 MS2 25/56 Linfeng_091311_rIgG_3.raw High RTEQEEDEELLTESSK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 124 3.19 0.00 1 6 24 3 641.62866 1922.87143 -5.82 25.99 2925 2925 MS2 30/60 Linfeng_091311_rIgG_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 442 3.17 0.00 1 5 25 3 439.89197 1317.66135 2.05 27.12 2392 2392 MS2 25/40 Linfeng_122411_rIgG_3.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 223 3.13 0.00 0 9 25 3 578.60876 1733.81174 2.35 36.78 3641 3641 MS2 29/56 Linfeng_122411_rIgG_3.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 540 3.13 0.00 1 27 100 2 799.40009 1597.79289 4.48 41.40 4518 4518 MS2 16/24 Linfeng_20120130_CHD1_2.raw High LDSIVIQQGR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 481 3.04 0.00 0 45 25 2 564.82080 1128.63432 -2.55 27.46 3089 3089 MS2 16/18 Linfeng_091311_rIgG_3.raw High ESEITDEDIDGILER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 164 3.04 0.00 0 6 19 2 867.40356 1733.79985 -4.51 37.65 4480 4480 MS2 23/28 Linfeng_091311_rIgG_2.raw High WGRDDIENIAR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 305 3.00 0.00 1 51 25 3 448.89200 1344.66144 -3.06 29.61 3419 3419 MS2 25/40 Linfeng_091311_rIgG_2.raw High WGRDDIENIAR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 351 2.99 0.00 1 50 25 3 448.89380 1344.66684 0.95 28.04 2513 2513 MS2 24/40 Linfeng_122411_rIgG_3.raw High QDSINAYNEPNSTK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 144 2.98 0.00 0 2 25 2 790.86127 1580.71526 -2.21 21.32 2268 2268 MS2 19/26 Linfeng_091311_rIgG_2.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 592 2.95 0.00 1 12 100 3 533.26935 1597.79349 4.86 41.22 4476 4476 MS2 20/48 Linfeng_20120130_CHD1_2.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 341 2.90 0.00 1 5 22 3 533.26788 1597.78910 2.11 32.08 3042 3042 MS2 24/48 Linfeng_122411_rIgG_3.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 404 2.82 0.00 1 18 25 3 439.88974 1317.65467 -3.02 28.98 3334 3334 MS2 22/40 Linfeng_091311_rIgG_2.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 318 2.80 0.00 1 55 25 3 385.21671 1153.63556 -0.78 28.80 2758 2758 MS2 15/32 Linfeng_122411_rIgG_4.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 416 2.80 0.00 0 27 25 2 661.34625 1321.68523 -3.58 34.25 4036 4036 MS2 16/20 Linfeng_091311_rIgG_2.raw High QDSINAYNEPNSTK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 135 2.79 0.00 0 0 25 2 790.86206 1580.71684 -1.21 21.48 2261 2261 MS2 18/26 Linfeng_091311_rIgG_3.raw High cNELQDIEK Unambiguous 4 1 IPI00297211.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 131 2.77 0.00 0 19 25 2 574.76324 1148.51921 -5.27 25.24 2822 2822 MS2 14/16 Linfeng_091311_rIgG_2.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 443 2.65 0.00 1 20 25 2 659.33472 1317.66216 2.66 27.14 2394 2394 MS2 16/20 Linfeng_122411_rIgG_3.raw High QNLLSVGDYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 336 2.64 0.00 0 30 25 2 582.80188 1164.59648 -3.71 31.93 3731 3731 MS2 14/18 Linfeng_091311_rIgG_2.raw High LGFDKENVYDELR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 543 2.63 0.00 1 13 100 2 799.39996 1597.79265 4.33 41.30 4496 4496 MS2 14/24 Linfeng_20120130_CHD1_2.raw High QNLLSVGDYR Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 337 2.62 0.00 0 19 25 2 582.80505 1164.60283 1.74 30.60 2848 2848 MS2 15/18 Linfeng_122411_rIgG_3.raw High KANYAVDAYFR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 403 2.61 0.00 1 25 25 2 659.33087 1317.65447 -3.18 29.01 3337 3337 MS2 15/20 Linfeng_091311_rIgG_2.raw High HGATHVFASK Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 290 2.55 0.00 0 54 25 3 352.18439 1054.53861 -4.06 12.40 1021 1021 MS2 17/36 Linfeng_091311_rIgG_2.raw High RcNTLITLIER Unambiguous 1 1 IPI00297211.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 425 2.52 0.00 1 26 25 3 463.59296 1388.76432 -2.58 33.74 3970 3970 MS2 24/40 Linfeng_091311_rIgG_2.raw High VLDILEDYcMWR Unambiguous 1 1 IPI00297211.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 2.51 0.00 0 36 25 2 806.88086 1612.75444 2.83 45.04 4710 4710 MS2 18/22 Linfeng_122411_rIgG_3.raw High TPEEVIEYSAVFWER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 254 2.51 0.00 0 23 25 3 618.96832 1854.89042 -0.28 46.29 5510 5510 MS2 19/56 Linfeng_091311_rIgG_4.raw High EIQEPDPTYEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 140 2.46 0.00 0 3 17 2 739.33844 1477.66960 0.17 3.60 361 361 MS2 16/22 Linfeng_122411_rIgG_3.raw High DIDILNSAGK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 567 2.42 0.00 0 22 25 2 523.27777 1045.54827 -4.02 32.24 3771 3771 MS2 16/18 Linfeng_091311_rIgG_2.raw High LLTQGFTNWNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 535 2.41 0.00 0 26 100 2 661.35199 1321.69670 5.10 41.61 4566 4566 MS2 14/20 Linfeng_20120130_CHD1_2.raw High TLQTISLLGYMK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 283 2.37 0.00 0 8 25 2 684.38507 1367.76286 1.84 39.99 4055 4055 MS2 18/22 Linfeng_122411_rIgG_3.raw High NPELPNAAQAQK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 329 2.35 0.00 0 12 25 2 640.83112 1280.65495 -3.47 22.27 2401 2401 MS2 18/22 Linfeng_091311_rIgG_2.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.29 0.00 0 10 5 2 612.29816 1223.58904 -1.04 3.99 425 425 MS2 16/18 Linfeng_122411_rIgG_3.raw High LDGQTPHDER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 130 2.28 0.00 0 33 25 2 584.27179 1167.53630 -2.26 13.80 1210 1210 MS2 15/18 Linfeng_091311_rIgG_2.raw High LVDQNLNK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 392 2.25 0.00 0 32 25 2 472.26279 943.51830 -2.61 18.38 1830 1830 MS2 12/14 Linfeng_091311_rIgG_3.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.23 0.00 0 46 25 2 612.29456 1223.58183 -6.93 25.45 2815 2815 MS2 16/18 Linfeng_091311_rIgG_3.raw High cNTLITLIER Unambiguous 1 1 IPI00297211.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 413 2.23 0.00 0 28 25 2 616.83472 1232.66216 -3.75 38.66 4612 4612 MS2 14/18 Linfeng_091311_rIgG_2.raw High ANRFEYLLK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 356 2.22 0.00 1 18 25 2 577.32184 1153.63640 -0.05 28.76 2608 2608 MS2 12/16 Linfeng_122411_rIgG_3.raw High VLIFSQmTR Unambiguous 1 1 IPI00297211.1 M7(Oxidation) CID 1.0000 0.0000 1 1 484 2.19 0.00 0 33 100 2 555.80408 1110.60088 2.91 32.07 2588 2588 MS2 12/16 Linfeng_20120130_CHD1_2.raw High FITDNTVEER Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 214 2.16 0.00 0 47 21 2 612.29449 1223.58171 -7.03 25.41 2846 2846 MS2 16/18 Linfeng_091311_rIgG_2.raw High VLIFSQmTR Unambiguous 1 1 IPI00297211.1 M7(Oxidation) CID 1.0000 0.0000 1 1 453 2.13 0.00 0 31 100 2 555.80469 1110.60210 4.01 32.33 2630 2630 MS2 12/16 Linfeng_20120130_CHD1_2.raw High NPELPNAAQAQK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 329 2.09 0.00 0 8 25 2 640.83148 1280.65569 -2.90 22.35 2380 2380 MS2 15/22 Linfeng_091311_rIgG_3.raw High NYTEEEDR Unambiguous 4 1 IPI00297211.1 CID 1.0000 0.0000 1 1 13 2.05 0.00 0 14 25 2 528.21643 1055.42558 -1.95 15.91 1507 1507 MS2 11/14 Linfeng_091311_rIgG_2.raw High EIQEPDPTYEEK Unambiguous 1 1 IPI00297211.1 CID 1.0000 0.0000 1 1 118 2.02 0.00 0 2 25 2 739.33630 1477.66533 -2.72 24.15 2666 2666 MS2 17/22 Linfeng_091311_rIgG_2.raw IPI00220834.8 X-ray repair cross-complementing protein 5 28.28 1 16 16 32 39.57 17.49 11 12 37.48 19.81 10 12 28.99 10.25 5 8 732 82.7 5.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DDEAAAVALSSLIHALDDLDmVAIVR Unambiguous 1 1 IPI00220834.8 M21(Oxidation) CID 1.0000 0.0000 1 1 524 7.27 0.00 0 7 13 3 913.80273 2739.39365 2.39 55.46 7429 7429 MS2 47/100 Linfeng_20120130_CHD1_4.raw High DDEAAAVALSSLIHALDDLDMVAIVR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 485 7.05 0.00 0 3 35 3 908.47144 2723.39975 2.78 55.51 7440 7440 MS2 46/100 Linfeng_20120130_CHD1_4.raw High YAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 368 4.96 0.00 0 26 25 3 774.39630 2321.17435 2.11 49.78 5315 5315 MS2 39/84 Linfeng_122411_rIgG_3.raw High YAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 371 4.73 0.00 0 28 25 3 774.39557 2321.17215 1.16 51.23 6123 6123 MS2 41/84 Linfeng_091311_rIgG_3.raw High ETVYcLNDDDETEVLKEDIIQGFR Unambiguous 1 1 IPI00220834.8 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 158 4.66 0.00 1 3 15 3 967.78662 2901.34531 -0.23 43.56 5171 5171 MS2 28/92 Linfeng_091311_rIgG_3.raw High ETVYcLNDDDETEVLKEDIIQGFR Unambiguous 1 1 IPI00220834.8 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 165 4.44 0.00 1 4 25 3 967.78979 2901.35483 3.05 42.75 4412 4412 MS2 30/92 Linfeng_122411_rIgG_3.raw High KKDQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 250 4.19 0.00 2 10 23 4 625.55634 2499.20351 -3.05 24.63 2700 2700 MS2 46/126 Linfeng_091311_rIgG_3.raw High KYAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 334 4.13 0.00 1 20 25 3 817.09583 2449.27292 3.47 45.72 4799 4799 MS2 28/88 Linfeng_122411_rIgG_3.raw High LGGHGPSFPLK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 337 3.77 0.00 0 33 25 3 370.53992 1109.60520 -4.56 25.76 2856 2856 MS2 25/40 Linfeng_091311_rIgG_3.raw High EEASGSSVTAEEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 111 3.22 0.00 0 5 25 2 697.81665 1394.62602 -1.58 16.82 1609 1609 MS2 23/26 Linfeng_091311_rIgG_3.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 184 3.17 0.00 0 5 25 3 748.34692 2243.02622 2.24 29.04 2645 2645 MS2 27/76 Linfeng_122411_rIgG_3.raw High EEASGSSVTAEEAKK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 206 3.03 0.00 1 11 25 2 761.86462 1522.72197 -0.81 15.17 1376 1376 MS2 19/28 Linfeng_091311_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 417 2.94 0.00 0 28 25 2 659.34180 1317.67632 -2.64 32.65 3786 3786 MS2 18/20 Linfeng_091311_rIgG_3.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 337 2.94 0.00 0 20 25 2 690.84943 1380.69158 1.60 38.21 3825 3825 MS2 20/22 Linfeng_122411_rIgG_3.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 379 2.88 0.00 0 18 100 3 748.34839 2243.03061 4.20 33.05 3271 3271 MS2 22/76 Linfeng_20120130_CHD1_4.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 331 2.87 0.00 0 23 25 2 690.84998 1380.69267 2.40 38.19 3962 3962 MS2 19/22 Linfeng_122411_rIgG_4.raw High DQVTAQEIFQDNHEDGPTAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 147 2.85 0.00 0 1 25 3 748.34363 2243.01633 -2.17 30.25 3469 3469 MS2 30/76 Linfeng_091311_rIgG_3.raw High KYAPTEAQLNAVDALIDSMSLAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 357 2.79 0.00 1 32 25 3 817.09210 2449.26175 -1.09 46.77 5574 5574 MS2 25/88 Linfeng_091311_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 378 2.77 0.00 0 18 25 2 659.34485 1317.68242 2.00 31.62 2982 2982 MS2 17/20 Linfeng_122411_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 585 2.77 0.00 0 24 100 2 659.34576 1317.68425 3.39 44.70 5664 5664 MS2 17/20 Linfeng_20120130_CHD1_4.raw High EEASGSSVTAEEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 113 2.76 0.00 0 7 25 2 697.81677 1394.62627 -1.41 17.02 1626 1626 MS2 20/26 Linfeng_091311_rIgG_4.raw High DKPSGDTAAVFEEGGDVDDLLDMI Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 136 2.67 0.00 0 10 25 3 837.05103 2509.13852 3.87 51.38 5514 5514 MS2 26/92 Linfeng_122411_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 502 2.61 0.00 0 16 25 3 439.89899 1317.68241 1.99 31.63 2983 2983 MS2 23/40 Linfeng_122411_rIgG_3.raw High LTIGSNLSIR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 384 2.58 0.00 0 7 100 2 537.32068 1073.63408 2.51 37.80 4244 4244 MS2 16/18 Linfeng_20120130_CHD1_4.raw High TDTLEDLFPTTK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 329 2.56 0.00 0 29 25 2 690.84705 1380.68682 -1.84 39.07 4608 4608 MS2 18/22 Linfeng_091311_rIgG_3.raw Medium IKTLFPLIEAK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 63 2.50 0.00 1 3 25 3 424.93674 1272.79566 2.36 35.52 3481 3481 MS2 25/40 Linfeng_122411_rIgG_3.raw High LTIGSNLSIR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 315 2.30 0.00 0 9 22 2 537.31982 1073.63237 0.92 30.88 2886 2886 MS2 17/18 Linfeng_122411_rIgG_3.raw High VITMFVQR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 267 2.22 0.00 0 5 100 2 497.28278 993.55828 3.24 35.84 3876 3876 MS2 12/14 Linfeng_20120130_CHD1_4.raw High LTIGSNLSIR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 377 2.19 0.00 0 15 100 2 537.32074 1073.63420 2.63 38.39 4356 4356 MS2 13/18 Linfeng_20120130_CHD1_4.raw High YGSDIVPFSK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 282 2.11 0.00 0 8 25 2 556.78558 1112.56389 1.44 29.98 2769 2769 MS2 16/18 Linfeng_122411_rIgG_3.raw High YGSDIVPFSK Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 221 2.06 0.00 0 16 25 2 556.78339 1112.55950 -2.51 31.53 3638 3638 MS2 16/18 Linfeng_091311_rIgG_3.raw High HIEIFTDLSSR Unambiguous 1 1 IPI00220834.8 CID 1.0000 0.0000 1 1 615 2.04 0.00 0 78 100 2 659.34644 1317.68559 4.40 44.95 5719 5719 MS2 9/20 Linfeng_20120130_CHD1_4.raw IPI00892671.1 32 kDa protein 28.14 13 6 6 18 26.59 21.02 4 11 0.00 16.66 17.63 4 7 295 32.0 8.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPEVTcVVVDVSHEDPEVK Unambiguous 13 1 IPI00892671.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 269 3.02 0.00 0 15 25 3 713.67889 2139.02213 -2.52 33.48 3998 3998 MS2 34/72 Linfeng_091311_rIgG_10.raw High TPEVTcVVVDVSHEDPEVK Unambiguous 13 1 IPI00892671.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 490 2.71 0.00 0 31 100 3 713.68317 2139.03495 3.47 40.51 5227 5227 MS2 24/72 Linfeng_20120130_CHD1_5.raw High NQVSLTcLVK Unambiguous 13 1 IPI00892671.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 576 2.63 0.00 0 12 100 2 581.32062 1161.63396 3.70 37.06 4332 4332 MS2 15/18 Linfeng_20120130_CHD1_10.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.62 0.00 0 15 25 2 661.34131 1321.67534 -2.08 29.78 3367 3367 MS2 17/26 Linfeng_091311_rIgG_9.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.60 0.00 0 3 25 2 661.34174 1321.67620 -1.44 29.83 3375 3375 MS2 18/26 Linfeng_091311_rIgG_7.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 315 2.59 0.00 0 25 25 3 625.31110 1873.91874 -1.68 41.15 4831 4831 MS2 28/64 Linfeng_091311_rIgG_9.raw High NQVSLTcLVK Unambiguous 13 1 IPI00892671.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 577 2.51 0.00 0 8 100 2 581.32074 1161.63420 3.91 36.98 4315 4315 MS2 14/18 Linfeng_20120130_CHD1_10.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 174 2.49 0.00 0 16 25 2 937.46222 1873.91716 -2.52 41.03 4975 4975 MS2 22/32 Linfeng_091311_rIgG_10.raw High GPSVFPLAPSSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 512 2.36 0.00 0 27 25 2 593.82513 1186.64299 -3.13 32.77 3906 3906 MS2 16/22 Linfeng_091311_rIgG_10.raw High NQVSLTcLVK Unambiguous 13 1 IPI00892671.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 579 2.34 0.00 0 14 100 2 581.32080 1161.63432 4.01 37.10 4339 4339 MS2 15/18 Linfeng_20120130_CHD1_10.raw High GPSVFPLAPSSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 534 2.34 0.00 0 35 25 2 593.82520 1186.64311 -3.03 32.89 3777 3777 MS2 15/22 Linfeng_091311_rIgG_9.raw High GPSVFPLAPSSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 574 2.24 0.00 0 36 100 2 593.82941 1186.65154 4.07 36.66 4251 4251 MS2 12/22 Linfeng_20120130_CHD1_10.raw High TTPPVLDSDGSFFLYSK Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 187 2.23 0.00 0 43 25 2 937.46289 1873.91850 -1.81 41.10 4920 4920 MS2 16/32 Linfeng_091311_rIgG_8.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 411 2.18 0.00 0 30 25 2 661.34058 1321.67388 -3.19 29.84 3440 3440 MS2 17/26 Linfeng_091311_rIgG_8.raw High EPQVYTLPPSR Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 578 2.15 0.00 0 12 100 2 643.84332 1286.67937 4.19 27.31 2381 2381 MS2 12/20 Linfeng_20120130_CHD1_10.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 386 2.09 0.00 0 14 25 2 661.34088 1321.67449 -2.73 29.88 3397 3397 MS2 17/26 Linfeng_091311_rIgG_6.raw High STSGGTAALGcLVK Unambiguous 13 1 IPI00892671.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 2.07 0.00 0 12 25 2 661.34113 1321.67497 -2.36 29.64 3483 3483 MS2 18/26 Linfeng_091311_rIgG_10.raw High EPQVYTLPPSR Unambiguous 13 1 IPI00892671.1 CID 1.0000 0.0000 1 1 574 2.07 0.00 0 30 100 2 643.84259 1286.67790 3.06 27.03 2340 2340 MS2 11/20 Linfeng_20120130_CHD1_10.raw IPI00017297.1 Matrin-3 28.10 11 17 17 59 114.69 25.15 15 38 48.41 17.00 8 13 23.65 8.03 4 8 847 94.6 6.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLSAAGIGLLAAATQSLSMPASLGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 286 5.77 0.00 0 14 25 3 791.09686 2371.27604 4.61 54.66 5893 5893 MS2 34/96 Linfeng_122411_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 278 5.01 0.00 0 8 25 3 657.03308 1969.08469 2.69 39.70 4018 4018 MS2 39/68 Linfeng_122411_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 273 4.72 0.00 0 22 25 3 657.02985 1969.07499 -2.24 40.71 4814 4814 MS2 35/68 Linfeng_091311_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 69 4.68 0.00 0 21 25 2 1219.69568 2438.38408 1.39 49.70 6014 6014 MS2 19/40 Linfeng_091311_rIgG_2.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 280 4.56 0.00 0 16 25 3 657.03015 1969.07590 -1.78 40.70 4875 4875 MS2 35/68 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 77 4.25 0.00 0 2 25 3 813.46808 2438.38968 3.69 48.49 5151 5151 MS2 33/80 Linfeng_122411_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 388 3.86 0.00 0 20 25 3 598.30103 1792.88852 3.35 44.12 4591 4591 MS2 35/68 Linfeng_122411_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 334 3.86 0.00 0 4 5 4 510.02304 2037.07033 -2.99 29.59 3416 3416 MS2 40/108 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 98 3.85 0.00 0 5 25 3 813.46460 2438.37925 -0.59 49.61 6003 6003 MS2 31/80 Linfeng_091311_rIgG_2.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 64 3.81 0.00 0 3 25 3 540.66174 1619.97068 -1.52 47.21 5701 5701 MS2 29/52 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 349 3.70 0.00 0 6 25 2 896.94757 1792.88786 2.99 44.18 4598 4598 MS2 24/34 Linfeng_122411_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 320 3.65 0.00 0 15 24 2 896.94403 1792.88078 -0.96 45.21 5447 5447 MS2 23/34 Linfeng_091311_rIgG_2.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 93 3.55 0.00 0 16 25 3 813.46552 2438.38199 0.54 49.62 5933 5933 MS2 30/80 Linfeng_091311_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 318 3.51 0.00 0 8 25 4 510.02435 2037.07558 -0.42 28.68 2742 2742 MS2 41/108 Linfeng_122411_rIgG_4.raw High VVHIMDFQR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 496 3.48 0.00 0 40 25 3 382.20367 1144.59647 2.83 27.42 2432 2432 MS2 23/32 Linfeng_122411_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 92 3.47 0.00 0 13 25 3 813.46545 2438.38181 0.46 49.76 5950 5950 MS2 29/80 Linfeng_091311_rIgG_4.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 448 3.43 0.00 0 19 100 3 679.69983 2037.08493 4.17 40.90 4136 4136 MS2 28/72 Linfeng_20120130_CHD1_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 341 3.42 0.00 0 14 8 4 510.02341 2037.07180 -2.27 28.60 2587 2587 MS2 43/108 Linfeng_122411_rIgG_3.raw High GPSLNPVLDYDHGSR Unambiguous 3 1 IPI00017297.1 CID 1.0000 0.0000 1 1 545 3.41 0.00 0 15 100 3 542.93579 1626.79282 3.50 35.27 3061 3061 MS2 23/56 Linfeng_20120130_CHD1_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 233 3.39 0.00 0 33 25 2 985.04144 1969.07561 -1.93 40.69 4874 4874 MS2 19/34 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 361 3.38 0.00 0 2 25 3 598.29871 1792.88156 -0.53 45.13 5369 5369 MS2 35/68 Linfeng_091311_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 314 3.37 0.00 0 27 25 2 896.94482 1792.88237 -0.08 45.14 5370 5370 MS2 24/34 Linfeng_091311_rIgG_3.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 63 3.37 0.00 0 8 25 3 540.66211 1619.97177 -0.84 47.24 5632 5632 MS2 31/52 Linfeng_091311_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 348 3.35 0.00 0 21 25 4 510.02322 2037.07107 -2.63 29.61 3374 3374 MS2 38/108 Linfeng_091311_rIgG_4.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 344 3.33 0.00 0 5 13 4 510.02344 2037.07192 -2.21 29.51 3368 3368 MS2 41/108 Linfeng_091311_rIgG_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 337 3.25 0.00 0 9 25 2 896.94879 1792.89031 4.35 44.21 4718 4718 MS2 22/34 Linfeng_122411_rIgG_4.raw High DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 106 3.25 0.00 1 4 14 4 591.27393 2362.07387 1.83 32.19 3056 3056 MS2 35/120 Linfeng_122411_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 94 3.24 0.00 0 35 25 3 813.46558 2438.38218 0.61 49.96 5936 5936 MS2 27/80 Linfeng_091311_rIgG_5.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 244 3.21 0.00 0 28 25 2 985.04578 1969.08428 2.48 39.74 4023 4023 MS2 22/34 Linfeng_122411_rIgG_3.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 3.06 0.00 0 4 25 2 787.38391 1573.76055 2.43 32.57 3106 3106 MS2 18/24 Linfeng_122411_rIgG_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 451 3.06 0.00 0 43 100 4 510.02661 2037.08462 4.02 40.59 4083 4083 MS2 31/108 Linfeng_20120130_CHD1_3.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 359 3.05 0.00 0 8 25 3 598.29816 1792.87992 -1.45 45.14 5437 5437 MS2 36/68 Linfeng_091311_rIgG_2.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 233 2.97 0.00 0 11 25 2 787.38013 1573.75298 -2.38 33.72 3967 3967 MS2 18/24 Linfeng_091311_rIgG_2.raw High GDADQASNILASFGLSAR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 25 25 3 598.29755 1792.87809 -2.47 45.37 5369 5369 MS2 27/68 Linfeng_091311_rIgG_6.raw High GPSLNPVLDYDHGSR Unambiguous 3 1 IPI00017297.1 CID 1.0000 0.0000 1 1 536 2.93 0.00 0 16 100 3 542.93591 1626.79319 3.73 35.43 3096 3096 MS2 23/56 Linfeng_20120130_CHD1_3.raw Medium DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 90 2.91 0.00 1 13 25 4 591.27142 2362.06386 -2.40 33.15 3850 3850 MS2 33/120 Linfeng_091311_rIgG_3.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 231 2.88 0.00 0 28 25 2 787.38068 1573.75408 -1.68 33.67 3917 3917 MS2 17/24 Linfeng_091311_rIgG_3.raw High GPSLNPVLDYDHGSR Unambiguous 3 1 IPI00017297.1 CID 1.0000 0.0000 1 1 520 2.75 0.00 0 16 100 3 542.93567 1626.79245 3.28 35.30 3068 3068 MS2 21/56 Linfeng_20120130_CHD1_3.raw High LcSLFYTNEEVAK Unambiguous 5 1 IPI00017297.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 440 2.75 0.00 0 43 100 2 787.38409 1573.76091 2.66 39.92 3968 3968 MS2 15/24 Linfeng_20120130_CHD1_3.raw High VIHLSNLPHSGYSDSAVLK Unambiguous 6 1 IPI00017297.1 CID 1.0000 0.0000 1 1 344 2.74 0.00 0 17 25 3 679.69556 2037.07212 -2.12 29.61 3382 3382 MS2 26/72 Linfeng_091311_rIgG_3.raw High YQLLQLVEPFGVISNHLILNK Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 103 2.71 0.00 0 14 37 3 813.46582 2438.38291 0.91 55.20 6477 6477 MS2 20/80 Linfeng_20120130_CHD1_3.raw High GYPHLcSIcDLPVHSNK Unambiguous 5 1 IPI00017297.1 C6(Carbamidomethyl); C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 190 2.69 0.00 0 29 25 3 666.31567 1996.93247 -2.19 29.78 3404 3404 MS2 22/64 Linfeng_091311_rIgG_3.raw High DSFDDRGPSLNPVLDYDHGSR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 106 2.62 0.00 1 3 25 3 788.02954 2362.07407 1.92 32.25 3064 3064 MS2 19/80 Linfeng_122411_rIgG_3.raw High GPSLNPVLDYDHGSR Unambiguous 3 1 IPI00017297.1 CID 1.0000 0.0000 1 1 505 2.60 0.00 0 14 100 3 542.93542 1626.79172 2.83 35.35 3078 3078 MS2 18/56 Linfeng_20120130_CHD1_3.raw High GNLGAGNGNLQGPR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 326 2.55 0.00 0 15 25 2 662.83789 1324.66850 -2.42 21.68 2318 2318 MS2 18/26 Linfeng_091311_rIgG_2.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 23 2.53 0.00 0 12 25 2 552.73193 1104.45659 -2.42 18.23 1835 1835 MS2 14/16 Linfeng_091311_rIgG_2.raw High VVHIMDFQR Unambiguous 10 1 IPI00017297.1 CID 1.0000 0.0000 1 1 423 2.52 0.00 0 51 25 3 382.20139 1144.58960 -3.17 29.36 3385 3385 MS2 19/32 Linfeng_091311_rIgG_2.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 179 2.50 0.00 0 4 24 2 605.28888 1209.57048 -3.45 24.78 2756 2756 MS2 16/20 Linfeng_091311_rIgG_2.raw Medium DLDELSRYPEDK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 181 2.50 0.00 1 17 25 3 493.90237 1479.69257 -2.48 28.69 3295 3295 MS2 20/44 Linfeng_091311_rIgG_2.raw High SFQQSSLSR Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 356 2.46 0.00 0 17 25 2 520.26056 1039.51384 -2.78 20.84 2202 2202 MS2 14/16 Linfeng_091311_rIgG_2.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 183 2.42 0.00 0 30 25 2 605.28979 1209.57231 -1.93 24.88 2728 2728 MS2 14/20 Linfeng_091311_rIgG_4.raw High TEEGPTLSYGR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 161 2.40 0.00 0 10 25 2 605.29022 1209.57317 -1.23 24.81 2726 2726 MS2 16/20 Linfeng_091311_rIgG_3.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 54 2.33 0.00 0 55 25 2 810.48956 1619.97185 -0.80 47.16 5623 5623 MS2 18/26 Linfeng_091311_rIgG_3.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 24 2.30 0.00 0 31 25 2 552.73199 1104.45671 -2.31 18.08 1786 1786 MS2 13/16 Linfeng_091311_rIgG_3.raw High SQESGYYDR Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 19 2.17 0.00 0 32 25 2 552.73169 1104.45610 -2.86 18.20 1792 1792 MS2 14/16 Linfeng_091311_rIgG_4.raw High ITPENLPQILLQLK Unambiguous 4 1 IPI00017297.1 CID 1.0000 0.0000 1 1 54 2.10 0.00 0 29 25 2 810.48883 1619.97038 -1.70 47.15 5694 5694 MS2 19/26 Linfeng_091311_rIgG_2.raw High GPGPLQER Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 209 2.07 0.00 0 17 25 2 427.22894 853.45061 -2.44 19.36 1995 1995 MS2 12/14 Linfeng_091311_rIgG_2.raw High GPGPLQER Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 203 2.02 0.00 0 39 25 2 427.22900 853.45073 -2.30 19.21 1947 1947 MS2 10/14 Linfeng_091311_rIgG_3.raw High IGPYQPNVPVGIDYVIPK Unambiguous 5 1 IPI00017297.1 CID 1.0000 0.0000 1 1 229 2.02 0.00 0 35 25 2 985.04108 1969.07488 -2.30 40.80 4826 4826 MS2 17/34 Linfeng_091311_rIgG_3.raw IPI00217709.1 Isoform Beta-1 of DNA topoisomerase 2-beta 28.01 5 30 35 75 58.37 11.54 16 22 117.36 19.12 24 36 54.31 8.95 10 17 1621 182.5 8.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 249 5.07 0.00 0 0 25 2 1244.12366 2487.24004 4.42 51.15 5486 5486 MS2 24/42 Linfeng_122411_rIgG_2.raw High SQDFGNLFSFPSYSQK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 191 5.01 0.00 0 8 25 2 926.43378 1851.86028 2.92 41.69 4288 4288 MS2 23/30 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 494 4.62 0.00 0 14 100 2 834.91235 1668.81743 3.48 45.69 5550 5550 MS2 22/30 Linfeng_20120130_CHD1_2.raw High GFQQISFVNSIATTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 363 4.55 0.00 0 23 25 3 547.62738 1640.86759 2.00 36.83 3675 3675 MS2 32/56 Linfeng_122411_rIgG_2.raw High GFQQISFVNSIATTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 296 4.08 0.00 0 9 25 2 820.93738 1640.86748 1.93 36.84 3676 3676 MS2 22/28 Linfeng_122411_rIgG_2.raw High VSIDPESNIISIWNNGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 357 4.02 0.00 0 12 25 2 943.48853 1885.96977 2.27 42.50 4391 4391 MS2 23/32 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 270 3.96 0.00 0 27 25 2 834.91077 1668.81426 1.58 36.85 3677 3677 MS2 21/30 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 454 3.95 0.00 0 3 13 2 731.38464 1461.76201 2.43 36.62 3646 3646 MS2 20/24 Linfeng_122411_rIgG_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 322 3.94 0.00 0 12 25 3 556.94330 1668.81534 2.23 36.89 3682 3682 MS2 29/60 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 661 3.90 0.00 0 5 100 2 731.38611 1461.76494 4.43 45.91 5603 5603 MS2 20/24 Linfeng_20120130_CHD1_2.raw High IKHFDGEDYTcITFQPDLSK Unambiguous 5 1 IPI00217709.1 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 192 3.88 0.00 1 9 25 4 604.28961 2414.13662 1.34 32.62 3143 3143 MS2 37/114 Linfeng_122411_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 326 3.86 0.00 0 5 25 3 829.75201 2487.24149 5.00 51.03 5471 5471 MS2 32/84 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 400 3.68 0.00 0 23 25 2 731.38110 1461.75493 -2.42 37.61 4474 4474 MS2 20/24 Linfeng_091311_rIgG_2.raw High LQLEETmPSPYGR Unambiguous 3 1 IPI00217709.1 M7(Oxidation) CID 1.0000 0.0000 1 1 507 3.68 0.00 0 19 100 2 768.87549 1536.74370 4.79 27.95 1980 1980 MS2 17/24 Linfeng_20120130_CHD1_2.raw High YAGPEDDAAITLAFSK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 508 3.61 0.00 0 28 100 2 834.91241 1668.81755 3.55 45.60 5529 5529 MS2 20/30 Linfeng_20120130_CHD1_2.raw High SQDFGNLFSFPSYSQK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 216 3.55 0.00 0 7 25 3 617.95819 1851.86002 2.79 41.70 4289 4289 MS2 31/60 Linfeng_122411_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.48 0.00 0 5 25 2 880.95746 1760.90764 4.30 49.23 5246 5246 MS2 20/30 Linfeng_122411_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 301 3.45 0.00 0 46 100 2 564.84241 1128.67754 3.49 42.22 4709 4709 MS2 19/22 Linfeng_20120130_CHD1_2.raw High VEFDEEFSGAPVEGAGEEALTPSVPINK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 493 3.42 0.00 0 16 100 3 973.47394 2918.40726 4.42 46.86 5825 5825 MS2 28/108 Linfeng_20120130_CHD1_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 260 3.42 0.00 0 20 25 2 564.84125 1128.67522 1.43 33.43 3245 3245 MS2 19/22 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 682 3.39 0.00 0 24 100 2 731.38647 1461.76567 4.93 45.50 5506 5506 MS2 19/24 Linfeng_20120130_CHD1_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 422 3.38 0.00 0 41 25 3 587.64032 1760.90641 3.60 49.19 5242 5242 MS2 30/60 Linfeng_122411_rIgG_2.raw High QImENAEINNIIK Unambiguous 12 2 IPI00414101.4;IPI00217709.1 M3(Oxidation) CID 1.0000 0.0000 1 1 595 3.36 0.00 0 31 100 2 773.40399 1545.80071 4.21 36.66 3484 3484 MS2 13/24 Linfeng_20120130_CHD1_2.raw High LAQAEAAGLHK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 388 3.34 0.00 0 23 25 3 370.20743 1108.60773 -2.94 18.23 1834 1834 MS2 25/40 Linfeng_091311_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 302 3.31 0.00 0 27 100 2 564.84229 1128.67729 3.27 42.32 4732 4732 MS2 19/22 Linfeng_20120130_CHD1_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 502 3.29 0.00 0 2 9 3 487.92520 1461.76105 1.77 36.62 3647 3647 MS2 33/48 Linfeng_122411_rIgG_2.raw High KYETVQDILK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 325 3.29 0.00 1 14 25 3 412.89960 1236.68424 0.62 28.63 2621 2621 MS2 20/36 Linfeng_122411_rIgG_2.raw High VSIDPESNIISIWNNGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 432 3.28 0.00 0 5 25 3 629.32813 1885.96982 2.29 42.48 4389 4389 MS2 31/64 Linfeng_122411_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 544 3.28 0.00 0 15 100 2 718.85754 1436.70781 4.28 42.17 4697 4697 MS2 16/22 Linfeng_20120130_CHD1_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 391 3.26 0.00 0 19 25 2 679.36108 1357.71489 2.80 25.21 2162 2162 MS2 19/22 Linfeng_122411_rIgG_2.raw High LDKDIVALMTR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 359 3.24 0.00 1 4 25 3 425.57623 1274.71415 0.30 33.97 3313 3313 MS2 22/40 Linfeng_122411_rIgG_2.raw High QIMENAEINNIIK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 355 3.20 0.00 0 2 25 2 765.40430 1529.80132 1.33 33.56 3261 3261 MS2 21/24 Linfeng_122411_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 317 3.18 0.00 0 33 100 2 564.84271 1128.67815 4.03 42.45 4763 4763 MS2 18/22 Linfeng_20120130_CHD1_2.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 308 3.13 0.00 0 18 25 3 829.74786 2487.22904 -0.01 52.22 6330 6330 MS2 29/84 Linfeng_091311_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 3.12 0.00 0 10 25 3 587.63788 1760.89908 -0.56 50.44 6031 6031 MS2 25/60 Linfeng_091311_rIgG_3.raw High NTVEITELPVR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 378 3.07 0.00 0 9 25 2 635.85529 1270.70329 2.43 30.70 2893 2893 MS2 16/20 Linfeng_122411_rIgG_2.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 503 3.06 0.00 0 5 25 3 487.92535 1461.76151 2.08 36.58 3616 3616 MS2 29/48 Linfeng_122411_rIgG_3.raw High IFDEILVNAADNK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 435 3.05 0.00 0 1 16 3 487.92239 1461.75263 -3.99 37.66 4481 4481 MS2 31/48 Linfeng_091311_rIgG_2.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 316 3.01 0.00 0 10 25 3 453.26355 1357.77610 2.54 41.39 4250 4250 MS2 26/44 Linfeng_122411_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 406 2.95 0.00 0 10 25 3 587.63690 1760.89615 -2.22 50.39 6101 6101 MS2 29/60 Linfeng_091311_rIgG_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 299 2.94 0.00 0 29 16 2 718.85217 1436.69707 -3.20 35.48 4198 4198 MS2 19/22 Linfeng_091311_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 354 2.94 0.00 0 39 25 2 564.83838 1128.66948 -3.65 34.80 4108 4108 MS2 19/22 Linfeng_091311_rIgG_2.raw High VYVPALIFGQLLTSSNYDDDEK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 313 2.91 0.00 0 32 25 3 829.74884 2487.23197 1.17 52.43 6251 6251 MS2 29/84 Linfeng_091311_rIgG_3.raw High VEFDEEFSGAPVEGAGEEALTPSVPINK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 492 2.89 0.00 0 14 100 3 973.47388 2918.40708 4.36 46.99 5857 5857 MS2 23/108 Linfeng_20120130_CHD1_2.raw High HFDGEDYTcITFQPDLSK Unambiguous 5 1 IPI00217709.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 73 2.84 0.00 0 19 25 3 724.99091 2172.95816 1.76 34.60 3392 3392 MS2 22/68 Linfeng_122411_rIgG_2.raw High VIHELANER Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 374 2.76 0.00 0 15 21 3 360.86362 1080.57630 -3.13 18.41 1860 1860 MS2 20/32 Linfeng_091311_rIgG_2.raw High AASNcGIVESILNWVK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 414 2.74 0.00 0 62 25 3 587.63922 1760.90311 1.73 49.14 5234 5234 MS2 22/60 Linfeng_122411_rIgG_3.raw High EWLVGMLGAESTK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 350 2.73 0.00 0 31 25 2 710.86292 1420.71855 3.09 40.05 4081 4081 MS2 19/24 Linfeng_122411_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 462 2.72 0.00 0 46 25 3 453.24280 1357.71384 2.02 27.32 2445 2445 MS2 20/44 Linfeng_122411_rIgG_2.raw Medium LDDANDAGGKHSLEcTLILTEGDSAK Unambiguous 5 1 IPI00217709.1 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 2.72 0.00 1 15 25 4 683.32880 2730.29336 1.66 30.99 2932 2932 MS2 30/150 Linfeng_122411_rIgG_2.raw Medium RLHGLPEQFLYGTATK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 375 2.72 0.00 1 23 25 4 458.50034 1830.97951 -3.63 31.76 3708 3708 MS2 26/90 Linfeng_091311_rIgG_2.raw High HSLEcTLILTEGDSAK Unambiguous 5 1 IPI00217709.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 320 2.67 0.00 0 23 25 3 591.96100 1773.86844 -0.21 29.94 2795 2795 MS2 28/60 Linfeng_122411_rIgG_2.raw High EDLAAFVEELDKVESQER Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 316 2.66 0.00 1 39 25 3 703.01318 2107.02500 2.81 44.55 4652 4652 MS2 18/68 Linfeng_122411_rIgG_2.raw High LQLEETMPSPYGR Unambiguous 3 1 IPI00217709.1 CID 1.0000 0.0000 1 1 519 2.66 0.00 0 17 100 2 760.87946 1520.75163 6.72 37.30 3629 3629 MS2 13/24 Linfeng_20120130_CHD1_2.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 302 2.66 0.00 0 37 25 2 718.85248 1436.69768 -2.77 35.58 4165 4165 MS2 16/22 Linfeng_091311_rIgG_3.raw High ELILFSNSDNER Unambiguous 12 2 IPI00414101.4;IPI00217709.1 CID 1.0000 0.0000 1 1 537 2.66 0.00 0 18 100 2 718.85699 1436.70671 3.52 42.30 4361 4361 MS2 14/22 Linfeng_20120130_CHD1_3.raw High DKLDETGVALK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 553 2.52 0.00 1 16 25 2 594.82458 1188.64189 -4.39 24.25 2680 2680 MS2 15/20 Linfeng_091311_rIgG_2.raw High YIFTMLSTLAR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 521 2.44 0.00 0 16 25 2 658.35950 1315.71172 2.89 43.31 4494 4494 MS2 16/20 Linfeng_122411_rIgG_2.raw High HGFLEEFITPIVKASKNK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 249 2.41 0.00 2 24 100 2 1029.57751 2058.14775 4.58 39.64 4732 4732 MS2 10/34 Linfeng_20120130_CHD1_8.raw High SYDDAESLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 61 2.40 0.00 0 22 25 2 514.23114 1027.45500 -2.80 21.52 2295 2295 MS2 14/16 Linfeng_091311_rIgG_2.raw High HLTYNDFINK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 292 2.40 0.00 0 6 25 2 632.82129 1264.63530 2.54 27.47 2465 2465 MS2 13/18 Linfeng_122411_rIgG_2.raw High HVDYVVDQVVGK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 608 2.37 0.00 0 7 100 2 679.36542 1357.72356 9.18 31.60 2515 2515 MS2 13/22 Linfeng_20120130_CHD1_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 316 2.32 0.00 0 8 25 2 491.75616 982.50505 2.43 28.42 2594 2594 MS2 13/14 Linfeng_122411_rIgG_2.raw High SLAVSGLGVIGR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 372 2.30 0.00 0 43 25 2 564.83862 1128.66997 -3.22 34.81 4063 4063 MS2 19/22 Linfeng_091311_rIgG_3.raw High NTVEITELPVR Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 369 2.27 0.00 0 36 25 2 635.85077 1270.69426 -4.67 32.23 3770 3770 MS2 17/20 Linfeng_091311_rIgG_2.raw High DKLDETGVALK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 572 2.22 0.00 1 42 25 2 594.82520 1188.64311 -3.36 24.31 2655 2655 MS2 15/20 Linfeng_091311_rIgG_3.raw High KGDLDTAAVK Unambiguous 2 1 IPI00217709.1 CID 1.0000 0.0000 1 1 587 2.21 0.00 1 41 25 2 509.28110 1017.55492 -2.60 16.68 1616 1616 MS2 15/18 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 284 2.15 0.00 0 5 25 2 491.75320 982.49913 -3.60 30.35 3521 3521 MS2 13/14 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.13 0.00 0 37 100 2 491.75668 982.50609 3.49 31.08 2423 2423 MS2 13/14 Linfeng_20120130_CHD1_2.raw High SYVDLYVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 438 2.13 0.00 0 18 25 2 493.76407 986.52086 1.54 29.63 2753 2753 MS2 13/14 Linfeng_122411_rIgG_2.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 288 2.11 0.00 0 4 16 2 679.39178 1357.77629 2.68 41.35 4244 4244 MS2 20/22 Linfeng_122411_rIgG_2.raw High SPSDLWK Unambiguous 11 2 IPI00217709.1;IPI00414101.4 CID 1.0000 0.0000 1 1 404 2.07 0.00 0 9 25 2 416.71194 832.41661 -4.05 28.00 3200 3200 MS2 10/12 Linfeng_091311_rIgG_2.raw High SYVDLYVK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 261 2.03 0.00 0 16 25 2 493.76163 986.51598 -3.41 31.25 3640 3640 MS2 12/14 Linfeng_091311_rIgG_2.raw High LcNIFSTK Unambiguous 12 2 IPI00217709.1;IPI00414101.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 306 2.03 0.00 0 44 25 2 491.75452 982.50176 -0.92 28.48 2570 2570 MS2 13/14 Linfeng_122411_rIgG_3.raw High LLFPAVDDNLLK Unambiguous 5 1 IPI00217709.1 CID 1.0000 0.0000 1 1 396 2.01 0.00 0 18 25 2 679.38757 1357.76787 -3.52 42.44 5096 5096 MS2 20/22 Linfeng_091311_rIgG_2.raw IPI00383296.5 Isoform 2 of Heterogeneous nuclear ribonucleoprotein M 27.93 2 18 18 30 51.54 27.79 17 19 34.89 15.05 9 11 0.00 691 73.6 8.82 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 323 4.36 0.00 0 10 25 2 876.94250 1752.87773 2.97 44.31 4730 4730 MS2 23/30 Linfeng_122411_rIgG_4.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 334 4.32 0.00 0 41 25 2 876.93896 1752.87065 -1.07 45.51 5413 5413 MS2 22/30 Linfeng_091311_rIgG_4.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 419 3.86 0.00 0 13 25 3 584.96198 1752.87137 -0.66 45.53 5415 5415 MS2 35/60 Linfeng_091311_rIgG_4.raw High FNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 280 3.68 0.00 0 10 25 3 522.58649 1565.74491 2.02 27.27 2554 2554 MS2 28/48 Linfeng_122411_rIgG_4.raw High VGEVTYVELLMDAEGK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 403 3.64 0.00 0 15 25 3 584.96362 1752.87632 2.16 44.30 4729 4729 MS2 33/60 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 355 3.41 0.00 0 8 25 3 476.25809 1426.75971 1.40 34.69 3521 3521 MS2 25/48 Linfeng_122411_rIgG_4.raw High GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 240 3.30 0.00 0 9 13 3 678.99017 2034.95597 1.45 30.11 2931 2931 MS2 30/88 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 298 3.29 0.00 0 14 25 2 713.88043 1426.75359 -2.89 35.78 4183 4183 MS2 20/24 Linfeng_091311_rIgG_4.raw High GNFGGSFAGSFGGAGGHAPGVAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 226 3.14 0.00 0 4 25 3 678.98724 2034.94718 -2.87 31.22 3589 3589 MS2 28/88 Linfeng_091311_rIgG_4.raw High DKFNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 296 3.07 0.00 1 13 25 4 452.97211 1808.86660 1.62 27.10 2531 2531 MS2 32/84 Linfeng_122411_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 222 2.99 0.00 0 18 25 2 642.81525 1284.62322 -4.65 21.93 2324 2324 MS2 18/28 Linfeng_091311_rIgG_3.raw High FNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 2.98 0.00 0 22 25 3 522.58411 1565.73777 -2.54 28.80 3266 3266 MS2 26/48 Linfeng_091311_rIgG_4.raw High VKEDPDGEHAR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 219 2.92 0.00 1 26 25 3 418.20258 1252.59317 1.16 2.44 208 208 MS2 24/40 Linfeng_091311_rIgG_4.raw Medium DKFNEcGHVLYADIK Unambiguous 2 1 IPI00383296.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 290 2.90 0.00 1 7 25 4 452.97031 1808.85940 -2.36 28.61 3240 3240 MS2 29/84 Linfeng_091311_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 238 2.89 0.00 0 8 4 2 642.81720 1284.62712 -1.61 3.34 341 341 MS2 22/28 Linfeng_122411_rIgG_4.raw High LGSTVFVANLDYK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 295 2.86 0.00 0 46 25 2 713.88416 1426.76103 2.33 34.58 3508 3508 MS2 20/24 Linfeng_122411_rIgG_4.raw High AFITNIPFDVK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 352 2.70 0.00 0 22 25 2 632.85187 1264.69646 2.21 38.67 4022 4022 MS2 17/20 Linfeng_122411_rIgG_4.raw High QGGGGGGGSVPGIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 245 2.65 0.00 0 5 25 2 642.81671 1284.62615 -2.37 21.82 2302 2302 MS2 22/28 Linfeng_091311_rIgG_4.raw High GEGERPAQNEK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 161 2.63 0.00 0 15 25 2 607.79156 1214.57585 -0.18 2.23 183 183 MS2 14/20 Linfeng_091311_rIgG_4.raw High INEILSNALK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 430 2.62 0.00 0 4 8 2 557.82758 1114.64787 1.05 31.01 3047 3047 MS2 16/18 Linfeng_122411_rIgG_4.raw High MGANSLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 290 2.50 0.00 0 10 25 2 439.21182 877.41637 -3.78 19.32 1950 1950 MS2 13/14 Linfeng_091311_rIgG_4.raw Medium GGNRFEPYANPTK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 271 2.48 0.00 1 27 25 3 484.23911 1450.70276 -3.20 22.55 2403 2403 MS2 26/48 Linfeng_091311_rIgG_4.raw High INEILSNALKR Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 297 2.36 0.00 1 7 25 2 635.87830 1270.74932 1.18 28.18 2675 2675 MS2 17/20 Linfeng_122411_rIgG_4.raw High MGANNLER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 309 2.22 0.00 0 20 25 2 452.71774 904.42821 -2.62 18.70 1863 1863 MS2 12/14 Linfeng_091311_rIgG_4.raw High ADILEDK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 447 2.20 0.00 0 38 25 2 402.20984 803.41240 -2.70 22.48 2393 2393 MS2 11/12 Linfeng_091311_rIgG_4.raw High AFITNIPFDVK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 357 2.15 0.00 0 36 25 2 632.84894 1264.69060 -2.42 40.08 4729 4729 MS2 15/20 Linfeng_091311_rIgG_4.raw High VGQTIER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 560 2.15 0.00 0 18 25 2 401.72394 802.44060 -1.47 15.20 1368 1368 MS2 11/12 Linfeng_091311_rIgG_4.raw High AAEVLNK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 443 2.09 0.00 0 41 25 2 372.71564 744.42400 -1.44 14.79 1309 1309 MS2 9/12 Linfeng_091311_rIgG_4.raw High FESPEVAER Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 239 2.06 0.00 0 45 25 2 532.25470 1063.50212 -3.20 23.32 2510 2510 MS2 13/16 Linfeng_091311_rIgG_4.raw High INEILSNALK Unambiguous 2 1 IPI00383296.5 CID 1.0000 0.0000 1 1 466 2.01 0.00 0 32 25 2 557.82483 1114.64238 -3.88 32.60 3770 3770 MS2 14/18 Linfeng_091311_rIgG_4.raw IPI00045498.4 Isoform 3 of Heterogeneous nuclear ribonucleoprotein D-like 27.87 4 4 7 15 17.53 20.90 4 6 24.80 24.18 6 9 244 27.2 8.65 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RGFcFITYTDEEPVKK Unambiguous 3 1 IPI00045498.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 312 4.52 0.00 2 14 25 3 663.99359 1989.96622 -3.89 31.49 3597 3597 MS2 30/60 Linfeng_091311_rIgG_7.raw High FGEVVDcTIKTDPVTGR Unambiguous 3 1 IPI00045498.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 3.89 0.00 1 10 25 3 631.98529 1893.94132 1.97 29.46 2902 2902 MS2 29/64 Linfeng_122411_rIgG_6.raw High RGFcFITYTDEEPVKK Unambiguous 3 1 IPI00045498.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 3.55 0.00 2 12 25 3 663.99762 1989.97831 2.19 30.51 3040 3040 MS2 23/60 Linfeng_122411_rIgG_6.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 375 3.41 0.00 0 3 25 2 853.43365 1705.86003 -2.55 32.53 3735 3735 MS2 25/30 Linfeng_091311_rIgG_7.raw High VFVGGLSPDTSEEQIK Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 394 3.06 0.00 0 6 25 2 853.43689 1705.86650 1.24 31.31 3144 3144 MS2 23/30 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 250 2.77 0.00 0 8 25 2 584.28802 1167.56877 -2.33 28.92 3252 3252 MS2 16/18 Linfeng_091311_rIgG_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 277 2.53 0.00 0 15 25 2 584.28796 1167.56865 -2.44 29.62 3362 3362 MS2 16/18 Linfeng_091311_rIgG_6.raw High SRGFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 475 2.50 0.00 1 10 25 3 386.55405 1157.64759 0.81 36.54 3804 3804 MS2 21/36 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 275 2.28 0.00 0 19 25 2 584.28815 1167.56902 -2.12 29.66 3316 3316 MS2 16/18 Linfeng_091311_rIgG_5.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 500 2.18 0.00 0 1 5 2 457.76004 914.51280 -0.76 41.28 4584 4584 MS2 13/14 Linfeng_122411_rIgG_5.raw High GFGFVLFK Unambiguous 13 2 IPI00045498.4;IPI00967562.1 CID 1.0000 0.0000 1 1 348 2.17 0.00 0 3 25 2 457.76132 914.51537 2.04 41.26 4391 4391 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw High KDLTEYLSR Unambiguous 3 1 IPI00045498.4 CID 1.0000 0.0000 1 1 315 2.01 0.00 1 37 25 2 562.79926 1124.59123 -3.04 28.77 3231 3231 MS2 11/16 Linfeng_091311_rIgG_7.raw IPI00032003.1 Emerin 27.56 2 6 6 8 22.88 27.56 6 8 0.00 254 29.0 5.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GYNDDYYEESYFTTR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 5 3.48 0.00 0 3 25 2 961.88727 1922.76726 -2.23 34.68 4012 4012 MS2 21/28 Linfeng_091311_rIgG_7.raw High LSPPSSSAASSYSFSDLNSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 172 3.48 0.00 0 7 25 3 721.00409 2160.99771 -3.12 33.03 3800 3800 MS2 32/80 Linfeng_091311_rIgG_7.raw High YNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 406 2.96 0.00 0 7 25 3 466.24658 1396.72519 -5.75 26.47 2916 2916 MS2 26/48 Linfeng_091311_rIgG_7.raw High APGAGLGQDR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 230 2.91 0.00 0 7 25 2 471.24277 941.47826 -1.83 17.78 1719 1719 MS2 15/18 Linfeng_091311_rIgG_7.raw High RYNIPHGPVVGSTR Unambiguous 1 1 IPI00032003.1 CID 1.0000 0.0000 1 1 393 2.84 0.00 1 45 25 3 518.28082 1552.82792 -4.14 23.72 2543 2543 MS2 24/52 Linfeng_091311_rIgG_7.raw High KEDALLYQSK Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 424 2.66 0.00 1 23 25 3 398.88171 1194.63059 -4.97 22.17 2328 2328 MS2 19/36 Linfeng_091311_rIgG_7.raw High KEDALLYQSK Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 422 2.53 0.00 1 23 25 2 597.81848 1194.62969 -5.72 22.19 2331 2331 MS2 16/18 Linfeng_091311_rIgG_7.raw High APGAGLGQDR Unambiguous 2 1 IPI00032003.1 CID 1.0000 0.0000 1 1 278 2.03 0.00 0 49 25 2 471.24225 941.47722 -2.93 17.84 1786 1786 MS2 11/18 Linfeng_091311_rIgG_8.raw IPI00784865.1 IGK@ protein 26.69 5 1 4 26 61.40 22.88 3 16 31.92 18.22 3 10 0.00 236 25.8 6.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 5.39 0.00 0 2 16 3 712.65765 2135.95841 -4.87 22.29 2412 2412 MS2 35/76 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 90 5.00 0.00 0 0 25 2 1068.48254 2135.95781 -5.15 22.34 2418 2418 MS2 27/38 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 106 4.95 0.00 0 2 25 3 712.65747 2135.95786 -5.13 22.40 2361 2361 MS2 34/76 Linfeng_091311_rIgG_7.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 107 4.92 0.00 0 13 25 3 712.65735 2135.95749 -5.30 22.13 2433 2433 MS2 32/76 Linfeng_091311_rIgG_10.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 104 4.79 0.00 0 7 25 3 712.65765 2135.95841 -4.87 22.28 2337 2337 MS2 33/76 Linfeng_091311_rIgG_9.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 103 4.04 0.00 0 0 25 3 712.65869 2135.96152 -3.41 22.16 2355 2355 MS2 30/76 Linfeng_091311_rIgG_3.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 372 4.03 0.00 0 6 25 3 599.97125 1797.89920 2.17 44.10 4505 4505 MS2 31/60 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 395 3.86 0.00 0 11 25 3 649.34839 1946.03061 1.83 40.20 4016 4016 MS2 31/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 340 3.66 0.00 0 18 25 2 973.51514 1946.02300 -2.08 41.39 4956 4956 MS2 22/34 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 83 3.56 0.00 0 0 25 2 1068.48535 2135.96343 -2.52 22.31 2458 2458 MS2 19/38 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 12 25 3 649.34894 1946.03226 2.68 41.22 4143 4143 MS2 26/68 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 346 3.44 0.00 0 12 25 2 973.51508 1946.02287 -2.15 41.32 5012 5012 MS2 18/34 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 409 3.43 0.00 0 3 23 3 649.34521 1946.02109 -3.06 41.23 5000 5000 MS2 29/68 Linfeng_091311_rIgG_10.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 389 3.37 0.00 0 6 25 3 649.34589 1946.02311 -2.03 41.29 4944 4944 MS2 30/68 Linfeng_091311_rIgG_8.raw High VDNALQSGNSQESVTEQDSK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 101 3.37 0.00 0 36 25 3 712.65924 2135.96317 -2.64 21.68 2033 2033 MS2 27/76 Linfeng_091311_rIgG_1.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 375 3.36 0.00 0 16 25 3 649.34900 1946.03244 2.77 40.13 3683 3683 MS2 28/68 Linfeng_122411_rIgG_7.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 348 3.36 0.00 0 6 25 2 973.51831 1946.02934 1.18 40.22 4019 4019 MS2 24/34 Linfeng_122411_rIgG_8.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 397 3.31 0.00 0 21 25 3 649.34851 1946.03098 2.02 40.11 3838 3838 MS2 29/68 Linfeng_122411_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 2.96 0.00 0 30 25 3 599.96838 1797.89060 -2.61 45.44 5533 5533 MS2 26/60 Linfeng_091311_rIgG_10.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 2.92 0.00 0 28 25 3 599.96863 1797.89133 -2.21 45.43 5471 5471 MS2 25/60 Linfeng_091311_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 339 2.88 0.00 0 18 25 2 899.45111 1797.89495 -0.19 44.33 4534 4534 MS2 17/30 Linfeng_122411_rIgG_8.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 379 2.81 0.00 0 33 25 3 599.96936 1797.89353 -0.98 45.47 5374 5374 MS2 21/60 Linfeng_091311_rIgG_9.raw High SGTASVVcLLNNFYPR Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 373 2.79 0.00 0 31 25 3 599.97186 1797.90104 3.19 44.20 4358 4358 MS2 21/60 Linfeng_122411_rIgG_9.raw High TVAAPSVFIFPPSDEQLK Unambiguous 8 3 IPI00550731.2;IPI00784865.1;IPI00784985.1 CID 1.0000 0.0000 1 1 385 2.78 0.00 0 8 25 3 649.34583 1946.02292 -2.12 41.34 4855 4855 MS2 25/68 Linfeng_091311_rIgG_9.raw High LLIYGASSR Unambiguous 1 1 IPI00784865.1 CID 1.0000 0.0000 1 1 237 2.43 0.00 0 33 25 2 490.28262 979.55797 0.85 21.75 1691 1691 MS2 14/16 Linfeng_122411_rIgG_8.raw High LLIYGASSR Unambiguous 1 1 IPI00784865.1 CID 1.0000 0.0000 1 1 299 2.33 0.00 0 61 25 2 490.28345 979.55962 2.53 20.74 1594 1594 MS2 12/16 Linfeng_122411_rIgG_8.raw IPI00930678.1 small nuclear ribonucleoprotein Sm D2 isoform 2 25.93 2 3 3 3 9.95 25.93 3 3 108 12.4 9.89 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High REEEEFNTGPLSVLTQSVK Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 365 4.39 0.00 1 9 25 3 721.70386 2163.09702 1.90 38.40 3732 3732 MS2 30/72 Linfeng_122411_rIgG_10.raw High EEEEFNTGPLSVLTQSVK Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 331 3.48 0.00 0 15 25 3 669.67084 2006.99796 3.08 42.14 4212 4212 MS2 31/68 Linfeng_122411_rIgG_10.raw High GDSVIVVLR Unambiguous 2 1 IPI00930678.1 CID 1.0000 0.0000 1 1 560 2.08 0.00 0 47 25 2 479.28751 957.56774 -5.30 29.26 2543 2543 MS2 15/16 Linfeng_122411_rIgG_10.raw IPI00005198.2 Interleukin enhancer-binding factor 2 25.90 3 7 7 18 30.00 18.46 5 11 24.53 22.82 6 7 0.00 390 43.0 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 388 4.48 0.00 0 5 7 3 700.37048 2099.09690 -0.52 40.28 4448 4448 MS2 33/76 Linfeng_122411_rIgG_5.raw High ILGQEGDASYLASEISTWDGVIVTPSEK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 265 4.00 0.00 0 7 25 3 989.16193 2965.47123 1.15 47.25 5368 5368 MS2 31/108 Linfeng_122411_rIgG_5.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 377 3.91 0.00 0 10 25 3 700.36877 2099.09177 -2.96 41.52 4867 4867 MS2 32/76 Linfeng_091311_rIgG_5.raw High ILGQEGDASYLASEISTWDGVIVTPSEK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 266 3.81 0.00 0 19 25 4 742.12347 2965.47207 1.43 47.28 5372 5372 MS2 38/162 Linfeng_122411_rIgG_5.raw High VKPAPDETSFSEALLK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 415 3.65 0.00 0 12 12 3 577.97565 1731.91239 -2.33 31.11 3189 3189 MS2 31/60 Linfeng_122411_rIgG_5.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 391 3.42 0.00 0 20 25 3 700.36914 2099.09287 -2.44 41.56 4893 4893 MS2 32/76 Linfeng_091311_rIgG_6.raw High NQDLAPNSAEQASILSLVTK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 412 3.41 0.00 0 11 25 3 700.36938 2099.09360 -2.09 41.63 4892 4892 MS2 28/76 Linfeng_091311_rIgG_7.raw High VKPAPDETSFSEALLK Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 413 3.29 0.00 0 39 25 3 577.97455 1731.90909 -4.24 32.61 3708 3708 MS2 28/60 Linfeng_091311_rIgG_5.raw High VKPAPDETSFSEALLKR Unambiguous 3 1 IPI00005198.2 CID 1.0000 0.0000 1 1 393 3.27 0.00 1 40 25 4 472.75955 1888.01638 -0.62 28.84 2874 2874 MS2 37/96 Linfeng_122411_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 149 2.88 0.00 0 15 17 3 470.61609 1409.83371 -1.85 39.91 4398 4398 MS2 25/52 Linfeng_122411_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 130 2.70 0.00 0 31 25 2 705.41919 1409.83110 -3.70 41.18 4823 4823 MS2 21/26 Linfeng_091311_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 135 2.57 0.00 0 10 25 3 470.61526 1409.83124 -3.60 41.30 4838 4838 MS2 24/52 Linfeng_091311_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 205 2.44 0.00 0 23 25 2 521.32361 1041.63994 -1.56 29.18 2920 2920 MS2 17/18 Linfeng_122411_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 251 2.31 0.00 0 21 25 2 521.32214 1041.63701 -4.37 31.28 3534 3534 MS2 17/18 Linfeng_091311_rIgG_5.raw High ILPTLEAVAALGNK Unambiguous 2 1 IPI00005198.2 CID 1.0000 0.0000 1 1 125 2.23 0.00 0 27 25 2 705.41974 1409.83220 -2.92 41.32 4863 4863 MS2 19/26 Linfeng_091311_rIgG_6.raw High WFEENASQSTVK Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 185 2.10 0.00 0 3 25 2 713.33405 1425.66081 -2.61 27.72 3058 3058 MS2 19/22 Linfeng_091311_rIgG_5.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 257 2.05 0.00 0 26 25 2 521.32245 1041.63762 -3.78 31.46 3605 3605 MS2 17/18 Linfeng_091311_rIgG_6.raw High VLQSALAAIR Unambiguous 1 1 IPI00005198.2 CID 1.0000 0.0000 1 1 213 2.01 0.00 0 16 25 2 521.32300 1041.63872 -2.73 31.55 3605 3605 MS2 17/18 Linfeng_091311_rIgG_7.raw IPI00964686.1 Putative uncharacterized protein HNRNPAB 25.71 8 6 7 33 37.00 21.43 5 13 24.67 18.93 5 9 27.48 12.86 3 11 280 30.3 7.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 624 3.66 0.00 0 8 100 2 752.38995 1503.77263 2.39 36.18 2944 2944 MS2 19/26 Linfeng_20120130_CHD1_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 3 25 2 752.38965 1503.77202 1.99 30.87 3086 3086 MS2 22/26 Linfeng_122411_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 131 3.44 0.00 0 5 5 2 750.34668 1499.68608 -0.87 3.57 360 360 MS2 19/24 Linfeng_122411_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 441 3.35 0.00 0 33 25 2 752.38629 1503.76531 -2.48 32.16 3697 3697 MS2 22/26 Linfeng_091311_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 140 3.28 0.00 0 19 25 2 750.34576 1499.68425 -2.09 20.11 2030 2030 MS2 19/24 Linfeng_091311_rIgG_9.raw High GFVFITFKEEEPVKK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 316 3.23 0.00 2 12 25 3 599.99615 1797.97391 -2.63 34.44 3992 3992 MS2 21/56 Linfeng_091311_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 465 3.22 0.00 0 11 25 2 752.39014 1503.77300 2.64 30.14 2571 2571 MS2 20/26 Linfeng_122411_rIgG_9.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 125 3.19 0.00 0 0 25 2 750.34674 1499.68620 -0.78 20.07 2070 2070 MS2 19/24 Linfeng_091311_rIgG_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 127 3.18 0.00 0 0 25 2 750.34601 1499.68474 -1.76 20.23 2064 2064 MS2 17/24 Linfeng_091311_rIgG_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 432 3.02 0.00 0 10 100 2 584.29059 1167.57390 2.06 29.44 2076 2076 MS2 16/18 Linfeng_20120130_CHD1_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 127 3.01 0.00 0 0 25 2 750.34637 1499.68547 -1.27 20.11 2148 2148 MS2 18/24 Linfeng_091311_rIgG_10.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 445 2.96 0.00 0 28 25 2 752.38629 1503.76531 -2.48 32.42 3722 3722 MS2 21/26 Linfeng_091311_rIgG_7.raw High mFVGGLSWDTSK Unambiguous 6 1 IPI00964686.1 M1(Oxidation) CID 1.0000 0.0000 1 1 279 2.84 0.00 0 49 100 2 672.32025 1343.63323 2.34 41.05 3538 3538 MS2 18/22 Linfeng_20120130_CHD1_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 250 2.77 0.00 0 8 25 2 584.28802 1167.56877 -2.33 28.92 3252 3252 MS2 16/18 Linfeng_091311_rIgG_7.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 140 2.69 0.00 0 19 25 3 500.56671 1499.68558 -1.20 20.18 2086 2086 MS2 22/48 Linfeng_091311_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 251 2.69 0.00 0 4 25 2 584.29047 1167.57366 1.85 27.51 2642 2642 MS2 16/18 Linfeng_122411_rIgG_6.raw High IFVGGLNPEATEEK Unambiguous 6 1 IPI00964686.1 CID 1.0000 0.0000 1 1 490 2.67 0.00 0 4 25 3 501.92908 1503.77268 2.43 30.97 3100 3100 MS2 22/52 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 264 2.59 0.00 0 23 25 2 584.28973 1167.57219 0.60 26.95 2612 2612 MS2 16/18 Linfeng_122411_rIgG_5.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 277 2.53 0.00 0 15 25 2 584.28796 1167.56865 -2.44 29.62 3362 3362 MS2 16/18 Linfeng_091311_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 510 2.52 0.00 0 44 100 2 584.29108 1167.57488 2.90 30.87 2212 2212 MS2 15/18 Linfeng_20120130_CHD1_6.raw High EVYQQQQYGSGGR Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 130 2.52 0.00 0 23 25 2 750.34552 1499.68376 -2.41 20.15 2115 2115 MS2 17/24 Linfeng_091311_rIgG_8.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 423 2.41 0.00 0 36 100 2 584.29059 1167.57390 2.06 28.43 1988 1988 MS2 14/18 Linfeng_20120130_CHD1_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 506 2.35 0.00 0 40 100 2 584.29114 1167.57500 3.00 29.04 2005 2005 MS2 14/18 Linfeng_20120130_CHD1_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 515 2.30 0.00 0 42 100 2 584.29108 1167.57488 2.90 30.61 2890 2890 MS2 16/18 Linfeng_20120130_CHD1_5.raw High GFVFITFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 516 2.29 0.00 0 4 25 2 479.77448 958.54167 2.05 40.16 4254 4254 MS2 12/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 275 2.28 0.00 0 19 25 2 584.28815 1167.56902 -2.12 29.66 3316 3316 MS2 16/18 Linfeng_091311_rIgG_5.raw High mFVGGLSWDTSK Unambiguous 6 1 IPI00964686.1 M1(Oxidation) CID 1.0000 0.0000 1 1 278 2.19 0.00 0 47 100 2 672.32068 1343.63408 2.97 40.92 3518 3518 MS2 19/22 Linfeng_20120130_CHD1_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 278 2.16 0.00 0 42 25 2 584.28961 1167.57195 0.39 25.65 2439 2439 MS2 15/18 Linfeng_122411_rIgG_5.raw High GFGFILFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 344 2.16 0.00 0 30 25 2 464.76895 928.53063 1.59 42.63 4563 4563 MS2 13/14 Linfeng_122411_rIgG_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 426 2.12 0.00 0 45 100 2 584.29059 1167.57390 2.06 29.72 2069 2069 MS2 15/18 Linfeng_20120130_CHD1_7.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 468 2.05 0.00 0 43 100 2 584.29102 1167.57475 2.79 30.71 2195 2195 MS2 14/18 Linfeng_20120130_CHD1_6.raw High FGEVVDcTIK Unambiguous 21 3 IPI00964686.1;IPI00045498.4;IPI00967562.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 2 434 2.03 0.00 0 43 100 2 584.29077 1167.57427 2.37 30.80 2931 2931 MS2 14/18 Linfeng_20120130_CHD1_5.raw High GFGFILFK Unambiguous 8 1 IPI00964686.1 CID 1.0000 0.0000 1 1 430 2.01 0.00 0 36 25 2 464.76712 928.52696 -2.36 44.10 5209 5209 MS2 13/14 Linfeng_091311_rIgG_6.raw IPI00304692.1 Heterogeneous nuclear ribonucleoprotein G 25.32 5 9 9 23 37.16 23.27 8 15 24.20 8.95 3 8 0.00 391 42.3 10.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 279 4.00 0.00 0 33 25 3 496.24557 1486.72217 0.55 38.57 4213 4213 MS2 25/52 Linfeng_122411_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 289 3.48 0.00 0 36 25 2 743.86670 1486.72612 3.21 38.73 4077 4077 MS2 20/26 Linfeng_122411_rIgG_6.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 233 3.28 0.00 0 6 8 2 743.86481 1486.72234 0.66 38.51 4205 4205 MS2 22/26 Linfeng_122411_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 269 3.27 0.00 0 35 25 2 743.86609 1486.72490 2.39 38.43 3472 3472 MS2 21/26 Linfeng_122411_rIgG_7.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 381 3.22 0.00 0 15 25 2 718.37445 1435.74162 -0.82 31.26 3208 3208 MS2 20/24 Linfeng_122411_rIgG_5.raw High VEQATKPSFESGR Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 330 3.18 0.00 0 17 25 2 718.36096 1435.71465 -2.09 19.34 1919 1919 MS2 16/24 Linfeng_091311_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 247 2.95 0.00 0 18 25 2 743.86267 1486.71807 -2.21 39.69 4628 4628 MS2 21/26 Linfeng_091311_rIgG_5.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 225 2.92 0.00 0 25 2 743.86151 1486.71575 -3.77 39.88 4683 4683 MS2 21/26 Linfeng_091311_rIgG_6.raw High GFAFVTFESPADAK Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 223 2.73 0.00 0 26 25 2 743.86328 1486.71929 -1.39 39.84 4666 4666 MS2 21/26 Linfeng_091311_rIgG_7.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 340 2.64 0.00 0 17 25 2 718.37286 1435.73845 -3.03 32.95 3753 3753 MS2 19/24 Linfeng_091311_rIgG_5.raw Medium DRDYSDHPSGGSYR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 46 2.50 0.00 1 26 25 3 537.89728 1611.67728 -0.62 16.82 1561 1561 MS2 17/52 Linfeng_091311_rIgG_5.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 342 2.48 0.00 0 18 25 2 718.37286 1435.73845 -3.03 33.13 3824 3824 MS2 18/24 Linfeng_091311_rIgG_6.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 373 2.48 0.00 0 7 25 2 718.37665 1435.74602 2.24 31.89 3219 3219 MS2 19/24 Linfeng_122411_rIgG_6.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 396 2.46 0.00 0 10 25 2 718.37622 1435.74516 1.65 31.17 2798 2798 MS2 18/24 Linfeng_122411_rIgG_10.raw High YDDYSSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 13 2.45 0.00 0 15 25 2 496.70078 992.39427 -1.33 16.70 1544 1544 MS2 13/14 Linfeng_091311_rIgG_5.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 26 2.42 0.00 0 4 25 2 589.24054 1177.47380 -1.56 20.36 2065 2065 MS2 16/18 Linfeng_091311_rIgG_5.raw High LFIGGLNTETNEK Unambiguous 5 1 IPI00304692.1 CID 1.0000 0.0000 1 1 340 2.35 0.00 0 18 25 2 718.37305 1435.73882 -2.77 33.07 3806 3806 MS2 19/24 Linfeng_091311_rIgG_7.raw High YDDYSSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 14 2.18 0.00 0 26 25 2 496.70074 992.39421 -1.39 16.91 1632 1632 MS2 14/14 Linfeng_091311_rIgG_6.raw High SDLYSSGR Unambiguous 3 1 IPI00304692.1 CID 1.0000 0.0000 1 1 97 2.17 0.00 0 25 25 2 442.70776 884.40825 -2.95 18.65 1823 1823 MS2 13/14 Linfeng_091311_rIgG_5.raw High GPPPSYGGSSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 189 2.13 0.00 0 33 25 2 531.25122 1061.49516 -5.58 16.13 1466 1466 MS2 14/20 Linfeng_091311_rIgG_5.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 26 2.04 0.00 0 3 25 2 589.24072 1177.47417 -1.25 20.52 2134 2134 MS2 17/18 Linfeng_091311_rIgG_6.raw High DSYESYGNSR Unambiguous 4 1 IPI00304692.1 CID 1.0000 0.0000 1 1 19 2.02 0.00 0 38 25 2 589.24017 1177.47307 -2.18 20.51 2103 2103 MS2 16/18 Linfeng_091311_rIgG_7.raw High ALEAVFGK Unambiguous 2 1 IPI00304692.1 CID 1.0000 0.0000 1 1 308 2.01 0.00 0 13 25 2 417.74051 834.47374 2.05 28.64 2793 2793 MS2 12/14 Linfeng_122411_rIgG_6.raw IPI00642046.1 RSL1D1 protein 25.15 2 12 12 13 35.45 25.15 12 13 0.00 489 54.8 10.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAALPIFSSFVSNWDEATK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 285 5.15 0.00 0 18 25 2 1035.51306 2070.01885 0.44 50.72 6072 6072 MS2 28/36 Linfeng_091311_rIgG_4.raw High SAALPIFSSFVSNWDEATK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 356 3.04 0.00 0 49 25 3 690.67706 2070.01664 -0.63 50.47 6041 6041 MS2 23/72 Linfeng_091311_rIgG_4.raw High SDSEDIcLFTK Unambiguous 2 1 IPI00642046.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 2.71 0.00 0 26 25 2 657.79590 1314.58452 -2.85 33.00 3823 3823 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLSSFDFFLTDAR Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 436 2.68 0.00 0 43 25 2 766.39166 1531.77605 -2.05 47.32 5643 5643 MS2 21/24 Linfeng_091311_rIgG_4.raw High KAVDALLTHcK Unambiguous 2 1 IPI00642046.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 390 2.68 0.00 1 32 25 3 419.23172 1255.68061 -1.73 21.45 2250 2250 MS2 29/40 Linfeng_091311_rIgG_4.raw High EINDcIGGTVLNISK Unambiguous 2 1 IPI00642046.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 382 2.62 0.00 0 21 25 2 816.91302 1632.81877 -4.56 35.08 4090 4090 MS2 20/28 Linfeng_091311_rIgG_4.raw High TASVLSKDDVAPESGDTTVK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 369 2.55 0.00 1 5 25 3 674.00592 2020.00321 -2.46 24.61 2691 2691 MS2 22/76 Linfeng_091311_rIgG_4.raw High TVSQIISLQTLK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 131 2.54 0.00 0 17 25 2 665.89935 1330.79143 -2.00 36.11 4224 4224 MS2 19/22 Linfeng_091311_rIgG_4.raw High KKVPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 41 2.54 0.00 2 21 25 3 437.94891 1311.83219 -2.84 24.38 2660 2660 MS2 27/44 Linfeng_091311_rIgG_4.raw Medium KVPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 119 2.49 0.00 1 22 25 3 395.25073 1183.73764 -2.79 28.72 3255 3255 MS2 22/40 Linfeng_091311_rIgG_4.raw High KALPASETPK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 201 2.19 0.00 1 15 25 2 521.30017 1041.59307 -0.84 14.38 1252 1252 MS2 12/18 Linfeng_091311_rIgG_4.raw High DDVAPESGDTTVK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 121 2.16 0.00 0 26 25 2 667.30847 1333.60967 -1.64 19.73 2009 2009 MS2 18/24 Linfeng_091311_rIgG_4.raw High VPVSVNLLSK Unambiguous 2 1 IPI00642046.1 CID 1.0000 0.0000 1 1 117 2.09 0.00 0 18 25 2 528.32562 1055.64397 -1.90 32.06 3698 3698 MS2 13/18 Linfeng_091311_rIgG_4.raw IPI00554711.3 Junction plakoglobin 25.10 4 9 13 20 0.00 12.43 8.99 4 4 49.68 18.52 10 16 745 81.7 6.14 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAIVHLINYQDDAELATR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 520 5.78 0.00 0 17 100 3 677.02014 2029.04587 5.37 46.07 5966 5966 MS2 30/68 Linfeng_20120130_CHD1_4.raw High SAIVHLINYQDDAELATR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 413 4.05 0.00 0 9 25 3 677.01782 2029.03891 1.94 33.28 3225 3225 MS2 29/68 Linfeng_122411_rIgG_2.raw High TLVTQNSGVEALIHAILR Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 199 3.78 0.00 0 39 100 2 968.05511 1935.10295 0.35 55.41 7416 7416 MS2 18/34 Linfeng_20120130_CHD1_4.raw High LLNQPNQWPLVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 315 3.70 0.00 0 1 100 2 725.41827 1449.82927 5.48 44.43 5605 5605 MS2 17/22 Linfeng_20120130_CHD1_4.raw High VLSVcPSNKPAIVEAGGmQALGK Unambiguous 1 1 IPI00554711.3 C5(Carbamidomethyl); M18(Oxidation) CID 1.0000 0.0000 1 1 514 3.66 0.00 1 20 100 3 781.41418 2342.22800 3.07 34.02 3493 3493 MS2 30/88 Linfeng_20120130_CHD1_4.raw High LLNQPNQWPLVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 303 3.57 0.00 0 4 100 2 725.41760 1449.82793 4.56 44.57 5636 5636 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LLNQPNQWPLVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 295 3.38 0.00 0 10 100 2 725.41748 1449.82768 4.39 44.13 5533 5533 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LLNQPNQWPLVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 310 3.31 0.00 0 24 100 2 725.41760 1449.82793 4.56 44.69 5663 5663 MS2 19/22 Linfeng_20120130_CHD1_4.raw High NLSDVATKQEGLESVLK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 358 3.24 0.00 1 22 25 3 611.00031 1830.98636 3.03 32.35 2863 2863 MS2 27/64 Linfeng_122411_rIgG_9.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 457 3.09 0.00 0 38 100 2 714.40863 1427.80998 4.20 40.76 4716 4716 MS2 17/26 Linfeng_20120130_CHD1_1.raw High LNTIPLFVQLLYSSVENIQR Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 125 3.04 0.00 0 21 25 3 783.10822 2347.31009 3.41 55.61 6414 6414 MS2 26/76 Linfeng_122411_rIgG_5.raw High VSVELTNSLFK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 380 2.83 0.00 0 21 100 2 618.84802 1236.68877 4.28 45.15 5763 5763 MS2 16/20 Linfeng_20120130_CHD1_4.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 353 2.77 0.00 0 28 100 2 714.40918 1427.81108 4.97 40.90 4747 4747 MS2 18/26 Linfeng_20120130_CHD1_1.raw High AGDKDDITEPAVcALR Unambiguous 1 1 IPI00554711.3 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 446 2.70 0.00 1 34 100 3 577.61890 1730.84214 2.46 30.78 2785 2785 MS2 17/60 Linfeng_20120130_CHD1_4.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 378 2.68 0.00 0 52 100 2 714.40723 1427.80718 2.23 40.63 4807 4807 MS2 19/26 Linfeng_20120130_CHD1_4.raw High LNYGIPAIVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 363 2.18 0.00 0 44 100 2 544.33154 1087.65581 4.37 41.89 5049 5049 MS2 15/18 Linfeng_20120130_CHD1_4.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 397 2.10 0.00 0 40 25 2 671.36755 1341.72783 1.30 28.07 2718 2718 MS2 14/22 Linfeng_122411_rIgG_6.raw High LAEPSQLLK Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 358 2.10 0.00 0 40 100 2 499.79926 998.59123 3.12 31.13 2859 2859 MS2 11/16 Linfeng_20120130_CHD1_4.raw High LVQLLVK Unambiguous 1 1 IPI00554711.3 CID 1.0000 0.0000 1 1 54 2.09 0.00 0 9 100 2 406.78519 812.56310 3.27 34.24 3542 3542 MS2 10/12 Linfeng_20120130_CHD1_4.raw High LAEPSQLLK Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 353 2.05 0.00 0 18 100 2 499.79935 998.59142 3.30 32.15 3067 3067 MS2 11/16 Linfeng_20120130_CHD1_4.raw IPI00009471.1 WD repeat-containing protein 3 24.71 1 13 13 22 40.89 15.80 8 12 34.95 15.80 9 10 0.00 943 106.0 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 403 5.08 0.00 0 39 25 3 670.00757 2008.00815 2.92 50.91 5456 5456 MS2 33/64 Linfeng_122411_rIgG_3.raw High AVFLLQNNLVELYSLNPSLPTPQPVR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 121 4.82 0.00 0 15 25 3 974.87537 2922.61155 0.91 49.96 5975 5975 MS2 31/100 Linfeng_091311_rIgG_4.raw High TLQLDEDVLcVSYSPNQK Unambiguous 1 1 IPI00009471.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 301 4.80 0.00 0 9 25 3 703.67761 2109.01828 0.64 37.18 3692 3692 MS2 33/68 Linfeng_122411_rIgG_3.raw High VWDIAYLQEIEDPEEPDPK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 275 4.75 0.00 0 14 25 3 762.70007 2286.08567 1.89 43.12 4460 4460 MS2 36/72 Linfeng_122411_rIgG_3.raw High VWDIAYLQEIEDPEEPDPK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 247 4.45 0.00 0 19 25 3 762.69769 2286.07853 -1.23 44.09 5237 5237 MS2 32/72 Linfeng_091311_rIgG_3.raw High AVFLLQNNLVELYSLNPSLPTPQPVR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 126 4.18 0.00 0 13 25 3 974.87433 2922.60843 -0.15 49.83 5960 5960 MS2 31/100 Linfeng_091311_rIgG_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 348 4.06 0.00 0 59 25 2 1004.50745 2008.00762 2.66 52.13 6220 6220 MS2 25/32 Linfeng_091311_rIgG_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 386 3.83 0.00 0 27 25 3 670.00659 2008.00522 1.46 52.04 6212 6212 MS2 29/64 Linfeng_091311_rIgG_3.raw High TEVWGLVLLSEEK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 467 3.38 0.00 0 27 25 2 751.90906 1502.81084 0.45 43.76 4544 4544 MS2 19/24 Linfeng_122411_rIgG_3.raw High LASGSKDTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 308 3.34 0.00 1 10 25 3 851.10876 2551.31174 3.05 45.92 4824 4824 MS2 29/88 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 300 3.11 0.00 0 17 25 2 574.32813 1147.64897 1.68 41.00 4186 4186 MS2 17/18 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 246 3.07 0.00 0 15 25 2 574.32593 1147.64458 -2.15 42.08 4986 4986 MS2 16/18 Linfeng_091311_rIgG_3.raw High ILAcHGTDSVLELFcILSK Unambiguous 1 1 IPI00009471.1 C4(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 375 3.05 0.00 0 11 25 3 726.04382 2176.11692 1.26 49.04 5859 5859 MS2 25/72 Linfeng_091311_rIgG_3.raw High GSSPGIQDTLEAEDGAFETDEAPEDR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 48 3.03 0.00 0 23 25 3 912.73224 2736.18216 2.39 35.27 3450 3450 MS2 23/100 Linfeng_122411_rIgG_3.raw High TLSFSSDNIAVLSAAADSIK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 323 2.99 0.00 0 38 25 3 670.68384 2010.03696 -1.05 43.98 5221 5221 MS2 26/76 Linfeng_091311_rIgG_4.raw High TLSFSSDNIAVLSAAADSIK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 323 2.85 0.00 0 33 25 3 670.68390 2010.03714 -0.96 43.90 5213 5213 MS2 27/76 Linfeng_091311_rIgG_3.raw High EAEYEESVAKEDQPAVPGETQGDSYFTGK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 46 2.84 0.00 1 1 25 3 1054.47180 3161.40085 -1.97 31.31 3607 3607 MS2 23/112 Linfeng_091311_rIgG_3.raw High ILAcHGTDSVLELFcILSK Unambiguous 1 1 IPI00009471.1 C4(Carbamidomethyl); C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 369 2.54 0.00 0 24 25 3 726.04504 2176.12058 2.95 48.08 5099 5099 MS2 23/72 Linfeng_122411_rIgG_3.raw High DAITQALFLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 254 2.53 0.00 0 29 25 2 574.32605 1147.64482 -1.93 42.34 4981 4981 MS2 16/18 Linfeng_091311_rIgG_9.raw High SSELEESLLVLPFSYVPDILK Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 204 2.48 0.00 0 19 25 2 1189.64563 2378.28398 4.10 55.20 5952 5952 MS2 13/40 Linfeng_122411_rIgG_3.raw High DTDIIVWDVINESGLYR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 380 2.45 0.00 0 18 25 2 1004.50903 2008.01079 4.24 51.03 5471 5471 MS2 12/32 Linfeng_122411_rIgG_3.raw High GNIVFVTLR Unambiguous 1 1 IPI00009471.1 CID 1.0000 0.0000 1 1 183 2.23 0.00 0 10 25 2 509.80420 1018.60112 -3.26 35.81 4194 4194 MS2 14/16 Linfeng_091311_rIgG_3.raw IPI00645869.1 Isoform 2 of Protein LAS1 homolog 24.69 5 12 12 15 38.58 22.32 10 11 8.79 5.16 4 4 0.00 717 81.2 4.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IcSIYTQSGENSLVQEGSEASPIGK Unambiguous 3 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 216 5.54 0.00 0 7 25 3 885.42285 2654.25400 -2.83 34.26 3993 3993 MS2 36/96 Linfeng_091311_rIgG_3.raw High cLAQEVNIPDWIVDLR Unambiguous 4 1 IPI00645869.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 3.99 0.00 0 26 25 2 970.99786 1940.98845 -0.78 48.26 5761 5761 MS2 22/30 Linfeng_091311_rIgG_3.raw High SGNELPLAVASTADLIR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 328 3.84 0.00 0 33 25 2 863.96802 1726.92876 -2.73 41.46 4909 4909 MS2 24/32 Linfeng_091311_rIgG_3.raw High AQQQEEQGSVNDVKEEEKEEK Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 130 3.77 0.00 2 4 25 4 616.03772 2461.12905 -1.45 18.48 1845 1845 MS2 40/120 Linfeng_091311_rIgG_3.raw High GLHSQNFTQALLER Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 400 3.52 0.00 0 27 25 3 538.61682 1613.83591 -2.22 31.82 3678 3678 MS2 23/52 Linfeng_091311_rIgG_3.raw High LLDVTGGLGTDELR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 426 3.36 0.00 0 31 25 2 729.89136 1458.77544 -3.08 36.78 4319 4319 MS2 22/26 Linfeng_091311_rIgG_3.raw High GcYFVLDWLQK Unambiguous 4 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 248 3.30 0.00 0 25 25 2 714.85193 1428.69658 -1.05 46.35 5521 5521 MS2 17/20 Linfeng_091311_rIgG_3.raw High GALQGSAWQVSSEDVR Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 303 3.12 0.00 0 24 25 2 845.41113 1689.81499 -2.48 31.10 3580 3580 MS2 21/30 Linfeng_091311_rIgG_3.raw High GSLPLSAHGIVVAWLSR Unambiguous 5 1 IPI00645869.1 CID 1.0000 0.0000 1 1 185 3.04 0.00 0 1 25 3 588.33588 1762.99308 -1.86 43.05 5108 5108 MS2 30/64 Linfeng_091311_rIgG_3.raw High SGNELPLAVASTADLIR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 330 2.67 0.00 0 23 25 3 576.31506 1726.93064 -1.65 41.53 4918 4918 MS2 31/64 Linfeng_091311_rIgG_3.raw High VEcVLAELK Unambiguous 3 1 IPI00645869.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 708 2.48 0.00 0 31 25 2 530.78961 1060.57195 1.11 31.05 2908 2908 MS2 13/16 Linfeng_122411_rIgG_3.raw High FSAGQWEAR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 221 2.43 0.00 0 54 25 2 526.25018 1051.49309 -2.41 27.77 3132 3132 MS2 14/16 Linfeng_091311_rIgG_3.raw High FVNLISER Unambiguous 3 1 IPI00645869.1 CID 1.0000 0.0000 1 1 481 2.29 0.00 0 23 25 2 489.27524 977.54320 1.74 29.94 2763 2763 MS2 14/14 Linfeng_122411_rIgG_3.raw High GcYFVLDWLQK Unambiguous 4 1 IPI00645869.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 2.01 0.00 0 46 25 2 714.85419 1428.70110 2.11 45.36 4751 4751 MS2 15/20 Linfeng_122411_rIgG_3.raw High FSAGQWEAR Unambiguous 4 1 IPI00645869.1 CID 1.0000 0.0000 1 1 223 2.00 0.00 0 56 25 2 526.25275 1051.49822 2.47 24.18 2004 2004 MS2 12/16 Linfeng_122411_rIgG_3.raw IPI00220740.1 Isoform 2 of Nucleophosmin 24.53 3 5 5 19 45.16 21.51 4 14 17.97 24.53 5 5 265 29.4 4.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 230 4.79 0.00 0 16 25 2 1114.10925 2227.21123 -1.97 46.51 5512 5512 MS2 24/40 Linfeng_091311_rIgG_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 233 4.40 0.00 0 4 25 3 607.28448 1819.83890 -2.41 45.55 5391 5391 MS2 32/52 Linfeng_091311_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 203 4.15 0.00 0 8 25 2 1114.11462 2227.22197 2.85 45.02 4868 4868 MS2 20/40 Linfeng_122411_rIgG_6.raw High ADKDYHFKVDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 145 3.99 0.00 2 5 8 5 515.44489 2573.19532 -2.45 24.73 2270 2270 MS2 53/160 Linfeng_122411_rIgG_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 269 3.95 0.00 0 5 25 3 607.28729 1819.84732 2.22 44.54 4806 4806 MS2 29/52 Linfeng_122411_rIgG_6.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 234 3.69 0.00 0 2 25 3 607.28516 1819.84092 -1.30 45.62 5392 5392 MS2 33/52 Linfeng_091311_rIgG_7.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 290 3.65 0.00 0 16 25 3 743.07568 2227.21250 -1.40 46.26 5481 5481 MS2 27/80 Linfeng_091311_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 277 3.60 0.00 0 24 25 3 743.07617 2227.21396 -0.74 46.37 5487 5487 MS2 29/80 Linfeng_091311_rIgG_7.raw High MTDQEAIQDLWQWR Unambiguous 2 1 IPI00220740.1 CID 1.0000 0.0000 1 1 214 3.48 0.00 0 37 25 2 910.42407 1819.84087 -1.33 45.77 5412 5412 MS2 18/26 Linfeng_091311_rIgG_7.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 156 3.38 0.00 0 0 25 2 784.86670 1568.72612 -2.47 22.79 2413 2413 MS2 19/24 Linfeng_091311_rIgG_7.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 163 3.32 0.00 0 0 22 2 784.86877 1568.73027 0.17 4.37 480 480 MS2 17/24 Linfeng_122411_rIgG_6.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 160 3.21 0.00 0 4 25 2 784.86694 1568.72661 -2.16 22.77 2437 2437 MS2 18/24 Linfeng_091311_rIgG_6.raw High VDNDENEHQLSLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 153 3.13 0.00 0 0 25 2 784.86694 1568.72661 -2.16 22.70 2395 2395 MS2 18/24 Linfeng_091311_rIgG_9.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 358 2.56 0.00 0 13 8 2 466.24014 931.47301 -0.15 3.81 396 396 MS2 15/16 Linfeng_122411_rIgG_6.raw High MSVQPTVSLGGFEITPPVVLR Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 276 2.53 0.00 0 25 25 3 743.07635 2227.21451 -0.50 46.37 5487 5487 MS2 24/80 Linfeng_091311_rIgG_9.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 363 2.41 0.00 0 39 25 2 466.23917 931.47106 -2.25 20.22 2164 2164 MS2 14/16 Linfeng_091311_rIgG_10.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 378 2.38 0.00 0 58 25 2 466.23907 931.47087 -2.45 20.34 2109 2109 MS2 14/16 Linfeng_091311_rIgG_6.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 376 2.34 0.00 0 47 25 2 466.23865 931.47002 -3.36 20.31 2075 2075 MS2 14/16 Linfeng_091311_rIgG_7.raw High GPSSVEDIK Unambiguous 3 1 IPI00220740.1 CID 1.0000 0.0000 1 1 377 2.16 0.00 0 69 25 2 466.23846 931.46965 -3.76 20.40 2151 2151 MS2 13/16 Linfeng_091311_rIgG_8.raw IPI00217465.5 Histone H1.2 24.41 5 7 8 82 87.31 24.41 8 35 73.00 15.96 5 29 56.05 15.49 4 18 213 21.4 10.93 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 267 4.22 0.00 1 1 100 2 663.88745 1326.76763 3.63 28.25 2449 2449 MS2 18/24 Linfeng_20120130_CHD1_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 273 4.17 0.00 1 2 100 2 663.88733 1326.76738 3.44 27.88 2387 2387 MS2 18/24 Linfeng_20120130_CHD1_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 272 3.98 0.00 1 5 100 2 663.88751 1326.76775 3.72 27.97 2400 2400 MS2 19/24 Linfeng_20120130_CHD1_8.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 408 3.91 0.00 1 6 25 3 412.55789 1235.65912 -3.21 21.51 2237 2237 MS2 30/44 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 274 3.91 0.00 1 7 100 2 663.88739 1326.76750 3.54 29.14 2597 2597 MS2 17/24 Linfeng_20120130_CHD1_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 279 3.88 0.00 1 3 100 2 663.88770 1326.76811 4.00 27.91 2391 2391 MS2 18/24 Linfeng_20120130_CHD1_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 273 3.71 0.00 1 1 100 2 663.88690 1326.76653 2.80 28.56 1965 1965 MS2 20/24 Linfeng_20120130_CHD1_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 312 3.60 0.00 1 22 25 3 442.92526 1326.76123 -1.19 24.46 2232 2232 MS2 28/48 Linfeng_122411_rIgG_6.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 372 3.59 0.00 1 0 25 2 618.33301 1235.65874 -3.52 21.55 2242 2242 MS2 19/22 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 245 3.56 0.00 1 9 25 2 663.88226 1326.75725 -4.19 26.35 2964 2964 MS2 20/24 Linfeng_091311_rIgG_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 245 3.55 0.00 1 34 25 2 663.88220 1326.75713 -4.28 26.11 2866 2866 MS2 19/24 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 258 3.52 0.00 1 9 7 3 442.92398 1326.75739 -4.09 3.97 424 424 MS2 26/48 Linfeng_122411_rIgG_2.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 276 3.50 0.00 1 7 100 2 663.88782 1326.76836 4.18 27.41 1861 1861 MS2 16/24 Linfeng_20120130_CHD1_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 274 3.41 0.00 1 4 100 2 663.88757 1326.76787 3.81 27.55 1872 1872 MS2 14/24 Linfeng_20120130_CHD1_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 246 3.32 0.00 1 37 25 2 663.88574 1326.76421 1.05 24.37 2221 2221 MS2 17/24 Linfeng_122411_rIgG_6.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 275 3.28 0.00 1 2 100 2 663.88696 1326.76665 2.89 27.49 1867 1867 MS2 17/24 Linfeng_20120130_CHD1_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 278 3.25 0.00 1 5 100 2 663.88708 1326.76689 3.08 29.18 2603 2603 MS2 15/24 Linfeng_20120130_CHD1_8.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 263 3.14 0.00 1 7 8 3 442.92404 1326.75757 -3.95 4.32 498 498 MS2 26/48 Linfeng_122411_rIgG_4.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 298 3.07 0.00 1 22 25 3 442.92255 1326.75309 -7.33 26.00 2851 2851 MS2 28/48 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 251 2.99 0.00 1 11 25 2 663.88226 1326.75725 -4.19 30.50 3467 3467 MS2 18/24 Linfeng_091311_rIgG_7.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 297 2.81 0.00 1 19 25 3 442.92267 1326.75345 -7.05 26.18 2941 2941 MS2 25/48 Linfeng_091311_rIgG_8.raw High KALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 395 2.75 0.00 1 52 25 3 412.55826 1235.66022 -2.32 19.69 1757 1757 MS2 20/44 Linfeng_091311_rIgG_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 390 2.74 0.00 0 7 25 2 554.28839 1107.56951 1.25 22.21 1936 1936 MS2 18/20 Linfeng_122411_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 601 2.72 0.00 0 11 100 2 423.26013 845.51299 4.55 28.45 1957 1957 MS2 15/16 Linfeng_20120130_CHD1_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 316 2.70 0.00 0 21 25 2 599.83923 1198.67119 2.79 28.32 2550 2550 MS2 14/22 Linfeng_122411_rIgG_3.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 400 2.67 0.00 0 5 25 2 599.83850 1198.66973 1.57 25.66 1988 1988 MS2 13/22 Linfeng_122411_rIgG_9.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 373 2.63 0.00 0 6 0 2 554.28534 1107.56340 -4.26 24.96 2713 2713 MS2 18/20 Linfeng_091311_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 412 2.55 0.00 0 36 25 2 554.28925 1107.57121 2.79 23.78 1702 1702 MS2 16/20 Linfeng_122411_rIgG_1.raw High SGVSLAALKK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 166 2.54 0.00 1 10 6 2 487.30368 973.60008 -4.14 24.40 2636 2636 MS2 16/18 Linfeng_091311_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 358 2.51 0.00 0 20 25 2 599.83838 1198.66948 1.37 28.84 2819 2819 MS2 14/22 Linfeng_122411_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 375 2.51 0.00 0 15 25 2 423.25940 845.51152 2.82 25.99 2239 2239 MS2 15/16 Linfeng_122411_rIgG_3.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 420 2.50 0.00 0 40 25 2 554.28882 1107.57036 2.02 24.79 1853 1853 MS2 16/20 Linfeng_122411_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 417 2.49 0.00 0 5 25 2 423.25885 845.51042 1.52 4.83 525 525 MS2 15/16 Linfeng_122411_rIgG_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 368 2.48 0.00 0 4 9 2 554.28558 1107.56389 -3.82 24.57 2427 2427 MS2 18/20 Linfeng_091311_rIgG_1.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 428 2.47 0.00 0 27 25 2 554.28925 1107.57121 2.79 23.72 1760 1760 MS2 16/20 Linfeng_122411_rIgG_7.raw Medium KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 263 2.46 0.00 1 23 15 3 442.92392 1326.75721 -4.22 4.10 443 443 MS2 26/48 Linfeng_122411_rIgG_3.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 276 2.45 0.00 0 15 25 2 599.83887 1198.67046 2.18 28.27 2687 2687 MS2 15/22 Linfeng_122411_rIgG_4.raw High KPAAATVTK Unambiguous 1 1 IPI00217465.5 CID 1.0000 0.0000 1 1 325 2.42 0.00 0 5 25 2 443.77130 886.53533 -0.41 0.79 66 66 MS2 12/16 Linfeng_091311_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 575 2.42 0.00 0 16 100 2 423.26035 845.51341 5.05 29.22 2611 2611 MS2 14/16 Linfeng_20120130_CHD1_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 367 2.41 0.00 0 9 25 2 554.28571 1107.56413 -3.60 24.87 2699 2699 MS2 18/20 Linfeng_091311_rIgG_9.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 421 2.41 0.00 0 19 25 2 423.25888 845.51048 1.59 4.41 462 462 MS2 15/16 Linfeng_122411_rIgG_9.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 362 2.41 0.00 0 9 25 2 554.28558 1107.56389 -3.82 24.83 2757 2757 MS2 18/20 Linfeng_091311_rIgG_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 377 2.40 0.00 0 2 25 2 554.28571 1107.56413 -3.60 24.79 2806 2806 MS2 18/20 Linfeng_091311_rIgG_10.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 389 2.40 0.00 0 15 25 2 599.83844 1198.66960 1.47 27.39 2374 2374 MS2 15/22 Linfeng_122411_rIgG_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 361 2.38 0.00 0 6 25 2 554.28607 1107.56487 -2.94 24.73 2708 2708 MS2 18/20 Linfeng_091311_rIgG_4.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 585 2.37 0.00 0 11 100 2 554.28931 1107.57134 2.90 24.40 1637 1637 MS2 13/20 Linfeng_20120130_CHD1_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 421 2.35 0.00 0 16 25 2 423.25882 845.51036 1.44 26.23 2416 2416 MS2 15/16 Linfeng_122411_rIgG_4.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 567 2.35 0.00 0 9 100 2 423.25961 845.51195 3.32 29.47 2048 2048 MS2 15/16 Linfeng_20120130_CHD1_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 356 2.34 0.00 0 8 25 2 554.28369 1107.56011 -7.24 26.90 2973 2973 MS2 17/20 Linfeng_091311_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 363 2.33 0.00 0 37 25 2 599.83789 1198.66850 0.55 28.03 2540 2540 MS2 15/22 Linfeng_122411_rIgG_2.raw High SGVSLAALKK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 130 2.33 0.00 1 9 16 2 487.30576 973.60423 0.13 3.41 336 336 MS2 16/18 Linfeng_122411_rIgG_2.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 387 2.32 0.00 0 13 24 2 554.28540 1107.56352 -4.15 24.68 2743 2743 MS2 18/20 Linfeng_091311_rIgG_2.raw High KASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 246 2.32 0.00 1 21 25 2 663.88226 1326.75725 -4.19 26.25 2652 2652 MS2 13/24 Linfeng_091311_rIgG_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 600 2.31 0.00 0 20 100 2 423.26001 845.51274 4.26 28.42 2478 2478 MS2 15/16 Linfeng_20120130_CHD1_8.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 289 2.30 0.00 0 4 2 2 599.83679 1198.66631 -1.28 0.01 2 2 MS2 17/22 Linfeng_122411_rIgG_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 429 2.30 0.00 0 10 25 2 423.25861 845.50994 0.94 27.13 2593 2593 MS2 15/16 Linfeng_122411_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 601 2.28 0.00 0 29 100 2 423.26089 845.51451 6.35 29.29 2623 2623 MS2 14/16 Linfeng_20120130_CHD1_8.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 396 2.26 0.00 0 60 25 2 554.28912 1107.57097 2.57 51.24 5066 5066 MS2 14/20 Linfeng_122411_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 384 2.24 0.00 0 29 25 2 599.83606 1198.66484 -2.50 29.98 3395 3395 MS2 14/22 Linfeng_091311_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 478 2.24 0.00 0 17 25 2 423.25635 845.50542 -4.40 28.78 3365 3365 MS2 15/16 Linfeng_091311_rIgG_10.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 528 2.23 0.00 0 23 100 2 423.26117 845.51506 7.00 29.35 2633 2633 MS2 15/16 Linfeng_20120130_CHD1_8.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.23 0.00 0 11 25 2 423.25717 845.50707 -2.45 28.67 3255 3255 MS2 15/16 Linfeng_091311_rIgG_3.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 366 2.22 0.00 0 8 25 2 554.28589 1107.56450 -3.27 24.98 2740 2740 MS2 18/20 Linfeng_091311_rIgG_6.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 334 2.21 0.00 0 8 1 2 599.83820 1198.66911 1.06 3.08 272 272 MS2 15/22 Linfeng_122411_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 354 2.21 0.00 0 19 25 2 554.28607 1107.56487 -2.94 24.67 2706 2706 MS2 18/20 Linfeng_091311_rIgG_3.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 466 2.21 0.00 0 51 25 2 423.25696 845.50664 -2.96 28.74 3258 3258 MS2 15/16 Linfeng_091311_rIgG_4.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 327 2.18 0.00 0 11 8 2 554.28772 1107.56816 0.04 3.25 286 286 MS2 16/20 Linfeng_122411_rIgG_8.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 494 2.16 0.00 0 2 11 2 423.25662 845.50597 -3.75 28.85 3305 3305 MS2 15/16 Linfeng_091311_rIgG_8.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 464 2.16 0.00 0 8 25 2 423.25677 845.50627 -3.39 34.25 3957 3957 MS2 15/16 Linfeng_091311_rIgG_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 415 2.14 0.00 0 75 25 2 554.28900 1107.57073 2.35 47.85 4660 4660 MS2 15/20 Linfeng_122411_rIgG_7.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 467 2.13 0.00 0 15 25 2 423.25705 845.50682 -2.74 28.70 3296 3296 MS2 15/16 Linfeng_091311_rIgG_2.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 358 2.13 0.00 0 22 25 2 554.28644 1107.56560 -2.28 24.91 2677 2677 MS2 17/20 Linfeng_091311_rIgG_5.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 484 2.12 0.00 0 24 25 2 423.25647 845.50566 -4.11 28.73 2989 2989 MS2 15/16 Linfeng_091311_rIgG_1.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.11 0.00 0 8 25 2 423.25699 845.50670 -2.89 28.83 3239 3239 MS2 15/16 Linfeng_091311_rIgG_7.raw High GTGASGSFK Unambiguous 6 2 IPI00217465.5;IPI00217468.3 CID 1.0000 0.0000 1 1 108 2.10 0.00 0 32 25 2 406.19971 811.39214 -2.91 13.39 1151 1151 MS2 10/16 Linfeng_091311_rIgG_6.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 378 2.08 0.00 0 21 25 2 423.25940 845.51152 2.82 25.64 2219 2219 MS2 15/16 Linfeng_122411_rIgG_2.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 457 2.07 0.00 0 25 25 2 423.25735 845.50743 -2.02 28.96 3224 3224 MS2 15/16 Linfeng_091311_rIgG_5.raw High KPAAATVTK Unambiguous 1 1 IPI00217465.5 CID 1.0000 0.0000 1 1 329 2.06 0.00 0 3 25 2 443.77155 886.53581 0.14 1.27 110 110 MS2 12/16 Linfeng_091311_rIgG_8.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 485 2.06 0.00 0 44 100 2 599.83832 1198.66936 1.27 31.64 2259 2259 MS2 13/22 Linfeng_20120130_CHD1_7.raw High ALAAAGYDVEK Unambiguous 5 1 IPI00217465.5 CID 1.0000 0.0000 1 1 445 2.05 0.00 0 59 25 2 554.28888 1107.57048 2.13 28.59 2249 2249 MS2 13/20 Linfeng_122411_rIgG_7.raw High ASGPPVSELITK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 311 2.04 0.00 0 25 25 2 599.83923 1198.67119 2.79 24.65 1874 1874 MS2 14/22 Linfeng_122411_rIgG_9.raw High SGVSLAALK Unambiguous 3 1 IPI00217465.5 CID 1.0000 0.0000 1 1 463 2.01 0.00 0 19 25 2 423.25723 845.50719 -2.31 28.89 3267 3267 MS2 15/16 Linfeng_091311_rIgG_6.raw IPI00791448.1 "cDNA FLJ51469, highly similar to 60S acidic ribosomal protein P0" 24.10 9 5 5 5 12.87 24.10 5 5 278 29.7 5.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGAIAPcEVTVPAQNTGLGPEK Unambiguous 9 1 IPI00791448.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.01 0.00 0 9 25 3 727.37030 2180.09635 -2.46 31.53 3603 3603 MS2 34/84 Linfeng_091311_rIgG_7.raw High GHLENNPALEK Unambiguous 9 1 IPI00791448.1 CID 1.0000 0.0000 1 1 329 2.53 0.00 0 18 25 2 611.31281 1221.61833 -3.23 18.25 1785 1785 MS2 16/20 Linfeng_091311_rIgG_7.raw High GTIEILSDVQLIK Unambiguous 3 1 IPI00791448.1 CID 1.0000 0.0000 1 1 254 2.49 0.00 0 30 25 2 714.91803 1428.82878 -1.48 42.37 4986 4986 MS2 17/24 Linfeng_091311_rIgG_7.raw High TSFFQALGITTK Unambiguous 8 1 IPI00791448.1 CID 1.0000 0.0000 1 1 324 2.47 0.00 0 3 25 2 657.35742 1313.70757 -1.88 42.97 5061 5061 MS2 19/22 Linfeng_091311_rIgG_7.raw High GNVGFVFTK Unambiguous 7 1 IPI00791448.1 CID 1.0000 0.0000 1 1 210 2.35 0.00 0 6 25 2 484.76212 968.51695 -3.19 32.21 3694 3694 MS2 14/16 Linfeng_091311_rIgG_7.raw IPI00917777.1 116 kDa U5 small nuclear ribonucleoprotein component isoform b 23.91 3 16 16 38 35.08 9.93 6 12 32.58 13.02 8 10 43.50 11.10 9 16 937 105.3 5.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IYADTFGDINYQEFAK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 457 5.04 0.00 0 21 100 2 947.94946 1894.89165 3.07 47.80 5541 5541 MS2 23/30 Linfeng_20120130_CHD1_3.raw High VLGENYTLEDEEDSQIcTVGR Unambiguous 3 1 IPI00917777.1 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 134 5.02 0.00 0 5 25 3 809.70605 2427.10361 2.26 32.98 3159 3159 MS2 39/80 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 313 4.27 0.00 0 10 25 2 993.50366 1986.00005 3.65 51.18 5489 5489 MS2 22/32 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 363 4.11 0.00 0 7 25 3 662.66943 1985.99375 0.48 52.00 6303 6303 MS2 29/64 Linfeng_091311_rIgG_2.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 323 4.07 0.00 0 52 25 2 899.95319 1798.89910 -1.13 46.37 5523 5523 MS2 24/30 Linfeng_091311_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 370 3.70 0.00 0 33 25 3 662.67145 1985.99979 3.52 51.05 5473 5473 MS2 32/64 Linfeng_122411_rIgG_3.raw High ILDAVVAQEPLHR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 324 3.48 0.00 0 13 100 2 730.91797 1460.82866 4.52 34.82 2975 2975 MS2 17/24 Linfeng_20120130_CHD1_3.raw High DSIVQGFQWGTR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 573 3.44 0.00 0 27 100 2 697.34949 1393.69170 4.12 45.00 4911 4911 MS2 18/22 Linfeng_20120130_CHD1_3.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 361 3.33 0.00 0 39 25 3 600.30524 1798.90116 0.02 46.45 5604 5604 MS2 26/60 Linfeng_091311_rIgG_2.raw High SIWAFGPDATGPNILVDDTLPSEVDK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 293 3.18 0.00 0 49 25 3 919.79230 2757.36234 0.16 47.39 5725 5725 MS2 27/100 Linfeng_091311_rIgG_2.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 371 3.10 0.00 0 15 25 3 662.67090 1985.99814 2.69 52.35 6229 6229 MS2 25/64 Linfeng_091311_rIgG_5.raw High IAVEPVNPSELPK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 331 3.10 0.00 0 19 100 2 696.89349 1392.77971 4.54 35.55 3120 3120 MS2 16/24 Linfeng_20120130_CHD1_3.raw High ILDAVVAQEPLHR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 322 3.06 0.00 0 11 100 2 730.91785 1460.82842 4.35 34.96 3002 3002 MS2 18/24 Linfeng_20120130_CHD1_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 409 3.05 0.00 0 8 25 2 742.90814 1484.80901 3.64 48.80 5191 5191 MS2 18/22 Linfeng_122411_rIgG_3.raw High GLAEDIENEVVQITWNR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 374 3.01 0.00 0 30 25 3 662.66968 1985.99448 0.85 52.03 6210 6210 MS2 24/64 Linfeng_091311_rIgG_3.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 43 25 2 899.95801 1798.90874 4.23 45.27 4739 4739 MS2 16/30 Linfeng_122411_rIgG_3.raw High AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 378 2.94 0.00 0 34 25 3 600.30670 1798.90555 2.46 45.26 4738 4738 MS2 20/60 Linfeng_122411_rIgG_3.raw High IYADTFGDINYQEFAK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 208 2.87 0.00 0 16 25 2 947.94818 1894.88909 1.72 38.54 3867 3867 MS2 13/30 Linfeng_122411_rIgG_3.raw High VADPVVTFcETVVETSSLK Unambiguous 3 1 IPI00917777.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 367 2.76 0.00 0 28 25 3 694.35583 2081.05295 2.77 44.13 4592 4592 MS2 31/72 Linfeng_122411_rIgG_3.raw High DSIVQGFQWGTR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 524 2.73 0.00 0 42 100 2 697.34979 1393.69231 4.56 44.95 4902 4902 MS2 17/22 Linfeng_20120130_CHD1_3.raw High ILDAVVAQEPLHR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 342 2.67 0.00 0 26 100 3 487.61420 1460.82804 4.09 34.76 2965 2965 MS2 21/48 Linfeng_20120130_CHD1_3.raw High TLDELGIHLTK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 331 2.64 0.00 0 16 100 2 620.35352 1239.69975 4.33 40.85 4127 4127 MS2 13/20 Linfeng_20120130_CHD1_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 390 2.57 0.00 0 45 25 2 742.90533 1484.80339 -0.14 50.17 6002 6002 MS2 18/22 Linfeng_091311_rIgG_4.raw High STPVTVVLPDTK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 419 2.51 0.00 0 18 25 2 628.85938 1256.71147 1.41 29.31 2680 2680 MS2 17/22 Linfeng_122411_rIgG_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 400 2.49 0.00 0 30 25 2 742.90552 1484.80376 0.11 49.96 6047 6047 MS2 17/22 Linfeng_091311_rIgG_2.raw Medium AFIPAIDSFGFETDLR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 376 2.49 0.00 0 50 25 3 600.30493 1798.90024 -0.49 46.44 5532 5532 MS2 23/60 Linfeng_091311_rIgG_3.raw High YDWDLLAAR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 339 2.49 0.00 0 17 25 2 561.78320 1122.55913 1.11 38.44 3855 3855 MS2 15/16 Linfeng_122411_rIgG_3.raw Medium ILDAVVAQEPLHR Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 353 2.46 0.00 0 15 100 3 487.61365 1460.82639 2.96 35.04 3014 3014 MS2 22/48 Linfeng_20120130_CHD1_3.raw High SFVEFILEPLYK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 348 2.30 0.00 0 54 25 2 742.90491 1484.80254 -0.72 49.98 5978 5978 MS2 16/22 Linfeng_091311_rIgG_3.raw High LAVTVcINK Unambiguous 2 1 IPI00917777.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 508 2.28 0.00 0 17 100 2 509.29333 1017.57939 3.16 29.41 2085 2085 MS2 12/16 Linfeng_20120130_CHD1_3.raw High TLDELGIHLTK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 339 2.25 0.00 0 16 100 2 620.35229 1239.69731 2.37 41.09 4171 4171 MS2 13/20 Linfeng_20120130_CHD1_3.raw High YDWDLLAAR Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 330 2.22 0.00 0 13 25 2 561.78082 1122.55437 -3.13 39.42 4711 4711 MS2 15/16 Linfeng_091311_rIgG_2.raw High IAVEPVNPSELPK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 281 2.22 0.00 0 23 25 2 696.88849 1392.76970 -2.64 31.74 3667 3667 MS2 16/24 Linfeng_091311_rIgG_3.raw High EGPLcDELIR Unambiguous 2 1 IPI00917777.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 479 2.16 0.00 0 23 100 2 601.29968 1201.59209 3.22 36.64 3337 3337 MS2 12/18 Linfeng_20120130_CHD1_3.raw High LGEFFQTK Unambiguous 3 1 IPI00917777.1 CID 1.0000 0.0000 1 1 453 2.10 0.00 0 0 100 2 485.25708 969.50688 2.92 33.79 2779 2779 MS2 11/14 Linfeng_20120130_CHD1_3.raw High STPVTVVLPDTK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 486 2.04 0.00 0 34 100 2 628.86127 1256.71526 4.42 33.80 2781 2781 MS2 14/22 Linfeng_20120130_CHD1_3.raw High STPVTVVLPDTK Unambiguous 2 1 IPI00917777.1 CID 1.0000 0.0000 1 1 469 2.03 0.00 0 35 100 2 628.86127 1256.71526 4.42 33.71 2763 2763 MS2 10/22 Linfeng_20120130_CHD1_3.raw High EGPLcDELIR Unambiguous 2 1 IPI00917777.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 477 2.02 0.00 0 17 100 2 601.29999 1201.59270 3.73 36.54 3318 3318 MS2 11/18 Linfeng_20120130_CHD1_3.raw IPI00027569.1 Heterogeneous nuclear ribonucleoprotein C-like 1 23.89 3 1 12 74 67.46 20.48 8 24 52.74 23.21 11 20 83.11 11.60 5 30 293 32.1 5.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 434 3.88 0.00 0 11 2 3 566.97308 1698.90470 -2.87 37.11 4335 4335 MS2 29/60 Linfeng_091311_rIgG_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.73 0.00 1 10 25 3 367.54764 1100.62836 -2.45 22.68 2398 2398 MS2 23/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 105 3.72 0.00 0 2 1 2 658.90076 1316.79424 0.40 48.54 5048 5048 MS2 19/22 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 3.49 0.00 1 13 100 2 562.30450 1123.60173 2.06 29.41 2073 2073 MS2 14/18 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 3.44 0.00 1 11 25 3 367.54770 1100.62854 -2.29 22.55 2408 2408 MS2 21/36 Linfeng_091311_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 401 3.43 0.00 0 31 12 3 566.97510 1698.91074 0.68 35.97 3731 3731 MS2 28/60 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 440 3.41 0.00 1 4 21 3 472.59454 1415.76908 -3.55 33.01 3808 3808 MS2 20/44 Linfeng_091311_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 406 3.37 0.00 0 18 12 3 566.97241 1698.90268 -4.06 37.17 4330 4330 MS2 30/60 Linfeng_091311_rIgG_7.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 461 3.33 0.00 1 5 18 3 472.59631 1415.77439 0.20 32.08 3243 3243 MS2 22/44 Linfeng_122411_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 19 25 3 566.97491 1698.91019 0.36 34.70 3005 3005 MS2 28/60 Linfeng_122411_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 455 3.23 0.00 1 9 100 2 562.30450 1123.60173 2.06 29.53 2084 2084 MS2 14/18 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 3.18 0.00 1 9 25 3 472.59464 1415.76935 -3.35 33.13 3814 3814 MS2 20/44 Linfeng_091311_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 444 3.17 0.00 1 14 100 2 562.30475 1123.60222 2.49 29.37 2070 2070 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 438 3.12 0.00 1 10 100 2 562.30457 1123.60185 2.17 29.82 2107 2107 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 3.10 0.00 1 20 100 2 562.30530 1123.60332 3.47 30.84 2209 2209 MS2 14/18 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 129 3.05 0.00 0 5 22 3 439.60141 1316.78968 -3.06 38.56 4519 4519 MS2 27/44 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 3.01 0.00 1 26 100 2 562.30444 1123.60161 1.95 28.69 2013 2013 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 454 2.98 0.00 1 10 100 2 562.30457 1123.60185 2.17 29.75 2101 2101 MS2 15/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 379 2.95 0.00 1 7 15 3 375.20358 1123.59620 -2.87 27.85 3126 3126 MS2 23/36 Linfeng_091311_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 2.95 0.00 1 33 100 2 562.30475 1123.60222 2.49 28.18 1964 1964 MS2 13/18 Linfeng_20120130_CHD1_6.raw High LKGDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 400 2.93 0.00 1 76 25 3 367.54758 1100.62818 -2.62 22.64 2459 2459 MS2 19/36 Linfeng_091311_rIgG_8.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 95 2.93 0.00 0 1 25 3 439.60367 1316.79645 2.08 37.44 3915 3915 MS2 29/44 Linfeng_122411_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.91 0.00 1 21 25 3 472.59464 1415.76935 -3.35 33.17 3882 3882 MS2 16/44 Linfeng_091311_rIgG_8.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 454 2.91 0.00 1 14 100 2 562.30450 1123.60173 2.06 29.23 2058 2058 MS2 15/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 439 2.90 0.00 1 18 100 2 562.30457 1123.60185 2.17 29.18 2053 2053 MS2 15/18 Linfeng_20120130_CHD1_6.raw High VDSLLENLEKIEKEQSK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 361 2.88 0.00 2 5 25 3 668.02954 2002.07407 1.85 37.68 3945 3945 MS2 26/64 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 449 2.84 0.00 1 28 100 2 562.30481 1123.60234 2.60 28.46 1992 1992 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 474 2.82 0.00 2 8 25 3 491.26559 1471.78223 2.07 28.87 2824 2824 MS2 30/48 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 362 2.81 0.00 1 10 25 3 375.20529 1123.60132 1.69 26.16 2462 2462 MS2 25/36 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 447 2.80 0.00 1 10 100 2 562.30444 1123.60161 1.95 29.78 2104 2104 MS2 15/18 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 512 2.78 0.00 1 0 100 2 708.39313 1415.77898 3.44 43.51 3922 3922 MS2 15/22 Linfeng_20120130_CHD1_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 795 2.75 0.00 0 6 100 2 580.31464 1159.62200 1.25 43.67 3960 3960 MS2 16/18 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 99 2.75 0.00 0 14 25 2 658.90125 1316.79521 1.14 36.95 3288 3288 MS2 20/22 Linfeng_122411_rIgG_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 520 2.75 0.00 0 7 25 2 580.31030 1159.61333 -6.23 35.55 4135 4135 MS2 16/18 Linfeng_091311_rIgG_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 556 2.74 0.00 1 15 100 2 708.39270 1415.77812 2.84 43.62 3948 3948 MS2 16/22 Linfeng_20120130_CHD1_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 687 2.73 0.00 0 0 100 2 580.31512 1159.62297 2.09 43.55 3932 3932 MS2 16/18 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 526 2.72 0.00 1 10 100 2 708.39417 1415.78105 4.91 43.22 3867 3867 MS2 12/22 Linfeng_20120130_CHD1_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 442 2.72 0.00 0 21 25 2 430.22852 859.44975 -2.64 22.63 2418 2418 MS2 13/14 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.70 0.00 0 4 2 2 658.89856 1316.78984 -2.94 38.55 4517 4517 MS2 20/22 Linfeng_091311_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 573 2.69 0.00 0 13 25 2 580.31134 1159.61540 -4.44 35.61 4132 4132 MS2 16/18 Linfeng_091311_rIgG_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 451 2.69 0.00 1 14 100 2 562.30450 1123.60173 2.06 29.48 2080 2080 MS2 14/18 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 457 2.67 0.00 1 35 100 2 562.30536 1123.60344 3.58 28.12 1959 1959 MS2 12/18 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.63 0.00 0 3 6 2 658.89728 1316.78728 -4.88 38.61 4510 4510 MS2 20/22 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.62 0.00 0 8 25 2 658.90186 1316.79643 2.07 37.62 3938 3938 MS2 19/22 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 386 2.62 0.00 0 21 25 2 430.22986 859.45244 0.49 4.62 516 516 MS2 13/14 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 373 2.61 0.00 1 8 25 3 375.20346 1123.59583 -3.20 27.91 3113 3113 MS2 22/36 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 92 2.61 0.00 0 16 25 2 658.90222 1316.79717 2.62 37.46 3611 3611 MS2 18/22 Linfeng_122411_rIgG_10.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 578 2.60 0.00 0 32 25 2 580.31506 1159.62285 1.98 31.39 2588 2588 MS2 16/18 Linfeng_122411_rIgG_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 699 2.59 0.00 0 19 100 2 580.31598 1159.62468 3.56 43.13 4063 4063 MS2 16/18 Linfeng_20120130_CHD1_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 437 2.59 0.00 1 11 100 2 562.30457 1123.60185 2.17 29.68 2095 2095 MS2 14/18 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 497 2.58 0.00 0 4 100 2 498.25711 995.50694 2.50 31.92 2312 2312 MS2 12/16 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 528 2.52 0.00 1 0 100 2 708.39355 1415.77983 4.05 43.44 3907 3907 MS2 13/22 Linfeng_20120130_CHD1_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 328 2.51 0.00 1 7 10 2 562.30157 1123.59587 -3.16 27.85 3125 3125 MS2 14/18 Linfeng_091311_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 80 2.49 0.00 0 27 25 2 658.90295 1316.79863 3.74 54.28 5899 5899 MS2 14/22 Linfeng_122411_rIgG_6.raw High SDVEAIFSKYGK Unambiguous 10 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 345 2.49 0.00 1 26 25 2 672.34662 1343.68596 1.30 31.82 3209 3209 MS2 18/22 Linfeng_122411_rIgG_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 8 25 2 658.89819 1316.78911 -3.49 38.59 4664 4664 MS2 18/22 Linfeng_091311_rIgG_10.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 387 2.47 0.00 0 31 21 2 849.95563 1698.90398 -3.30 37.01 4322 4322 MS2 15/30 Linfeng_091311_rIgG_6.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 697 2.40 0.00 0 28 100 2 580.31580 1159.62432 3.25 42.53 3757 3757 MS2 13/18 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 505 2.39 0.00 0 1 100 2 498.25717 995.50707 2.63 32.91 2446 2446 MS2 13/16 Linfeng_20120130_CHD1_6.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 124 2.36 0.00 0 8 25 2 658.89771 1316.78813 -4.24 38.64 4517 4517 MS2 19/22 Linfeng_091311_rIgG_9.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 367 2.34 0.00 0 24 9 2 849.95471 1698.90215 -4.38 37.05 4315 4315 MS2 16/30 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVKK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 35 2.27 0.00 1 11 25 2 722.94958 1444.89189 2.22 33.29 3398 3398 MS2 15/24 Linfeng_122411_rIgG_6.raw High MIASQVVDINLAAEPK Unambiguous 2 1 IPI00027569.1 CID 1.0000 0.0000 1 1 404 2.26 0.00 0 3 14 2 849.95953 1698.91179 1.30 35.96 3730 3730 MS2 17/30 Linfeng_122411_rIgG_6.raw High GDDLQAIK Unambiguous 8 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 441 2.24 0.00 0 59 25 2 430.22852 859.44975 -2.64 22.71 2402 2402 MS2 13/14 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 90 2.23 0.00 0 36 25 2 658.90192 1316.79656 2.16 37.27 3730 3730 MS2 16/22 Linfeng_122411_rIgG_2.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 497 2.23 0.00 0 1 100 2 498.25693 995.50658 2.14 33.93 2591 2591 MS2 13/16 Linfeng_20120130_CHD1_6.raw High QKVDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 572 2.20 0.00 1 0 100 2 708.39276 1415.77825 2.93 43.83 3996 3996 MS2 10/22 Linfeng_20120130_CHD1_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 276 2.20 0.00 0 4 13 2 498.25635 995.50542 0.97 30.15 2993 2993 MS2 15/16 Linfeng_122411_rIgG_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 459 2.16 0.00 0 14 100 2 498.25650 995.50572 1.28 32.96 2428 2428 MS2 12/16 Linfeng_20120130_CHD1_7.raw High VDSLLENLEK Unambiguous 9 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 688 2.13 0.00 0 30 100 2 580.31549 1159.62370 2.72 43.05 4047 4047 MS2 14/18 Linfeng_20120130_CHD1_7.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 331 2.12 0.00 1 14 25 2 562.30176 1123.59624 -2.83 27.81 3099 3099 MS2 13/18 Linfeng_091311_rIgG_7.raw High VFIGNLNTLVVK Unambiguous 12 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 88 2.09 0.00 0 48 25 2 658.90179 1316.79631 1.98 48.18 5259 5259 MS2 14/22 Linfeng_122411_rIgG_6.raw High KSDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 355 2.08 0.00 1 11 9 2 562.30353 1123.59978 0.32 26.25 2474 2474 MS2 14/18 Linfeng_122411_rIgG_6.raw High SDVEAIFSK Unambiguous 11 2 IPI00027569.1;IPI00216592.2 CID 1.0000 0.0000 1 1 300 2.01 0.00 0 2 22 2 498.25476 995.50224 -2.22 31.60 3612 3612 MS2 13/16 Linfeng_091311_rIgG_7.raw IPI00911039.1 "cDNA FLJ54408, highly similar to Heat shock 70 kDa protein 1" 23.89 18 7 9 18 18.76 14.51 6 6 28.84 16.89 6 9 9.78 7.34 3 3 586 63.9 5.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELEQVcNPIISGLYQGAGGPGPGGFGAQGPK Unambiguous 3 1 IPI00911039.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 244 5.49 0.00 0 6 25 3 1019.17371 3055.50656 4.00 41.25 4344 4344 MS2 36/120 Linfeng_122411_rIgG_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 302 4.58 0.00 0 8 25 2 829.92651 1658.84575 -2.40 31.63 3641 3641 MS2 23/28 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 377 4.08 0.00 0 5 25 3 563.30670 1687.90555 2.44 36.51 3749 3749 MS2 33/60 Linfeng_122411_rIgG_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 301 3.72 0.00 0 1 25 2 829.92999 1658.85271 1.79 30.25 2948 2948 MS2 24/28 Linfeng_122411_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 437 3.62 0.00 0 21 25 3 563.30359 1687.89621 -3.10 37.66 4422 4422 MS2 30/60 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 465 3.58 0.00 0 26 100 2 844.45770 1687.90813 3.96 46.26 6011 6011 MS2 20/30 Linfeng_20120130_CHD1_4.raw High NQVALNPQNTVFDAK Unambiguous 4 1 IPI00911039.1 CID 1.0000 0.0000 1 1 472 3.44 0.00 0 6 100 2 829.93018 1658.85307 2.02 35.50 3810 3810 MS2 20/28 Linfeng_20120130_CHD1_4.raw High ATAGDTHLGGEDFDNR Unambiguous 17 1 IPI00911039.1 CID 1.0000 0.0000 1 1 78 3.28 0.00 0 18 25 3 559.24756 1675.72812 -1.57 23.55 2543 2543 MS2 25/60 Linfeng_091311_rIgG_4.raw High IINEPTAAAIAYGLDR Unambiguous 6 1 IPI00911039.1 CID 1.0000 0.0000 1 1 349 3.15 0.00 0 12 25 2 844.45648 1687.90569 2.52 36.60 3760 3760 MS2 22/30 Linfeng_122411_rIgG_4.raw High DAGVIAGLNVLR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 239 2.86 0.00 0 3 25 2 599.35229 1197.69731 1.87 37.97 3933 3933 MS2 20/22 Linfeng_122411_rIgG_4.raw High AQIHDLVLVGGSTR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 349 2.83 0.00 0 17 25 3 489.27451 1465.80896 -2.22 29.72 3390 3390 MS2 24/52 Linfeng_091311_rIgG_4.raw High DAGVIAGLNVLR Unambiguous 3 1 IPI00911039.1 CID 1.0000 0.0000 1 1 286 2.75 0.00 0 47 100 2 599.35315 1197.69902 3.30 47.52 6296 6296 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ARFEELcSDLFR Unambiguous 5 1 IPI00911039.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 262 2.65 0.00 1 25 25 3 514.91840 1542.74063 2.35 35.00 3559 3559 MS2 26/44 Linfeng_122411_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 223 2.64 0.00 0 47 25 2 744.35620 1487.70513 2.56 27.93 2361 2361 MS2 17/24 Linfeng_122411_rIgG_10.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 222 2.22 0.00 0 14 25 2 744.35614 1487.70500 2.48 29.24 2817 2817 MS2 19/24 Linfeng_122411_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 183 2.13 0.00 0 21 25 2 744.35291 1487.69853 -1.87 30.71 3523 3523 MS2 18/24 Linfeng_091311_rIgG_4.raw High TTPSYVAFTDTER Unambiguous 24 2 IPI00003865.1;IPI00911039.1 CID 1.0000 0.0000 1 1 229 2.04 0.00 0 39 25 2 744.35632 1487.70537 2.73 27.90 2277 2277 MS2 17/24 Linfeng_122411_rIgG_9.raw IPI00440493.2 "ATP synthase subunit alpha, mitochondrial" 23.87 5 10 10 15 0.00 24.69 19.53 8 8 21.20 8.86 4 7 553 59.7 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EVAAFAQFGSDLDAATQQLLSR Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 375 5.68 0.00 0 8 25 3 780.06250 2338.17295 2.34 50.10 5731 5731 MS2 38/84 Linfeng_122411_rIgG_5.raw High ILGADTSVDLEETGR Unambiguous 5 1 IPI00440493.2 CID 1.0000 0.0000 1 1 499 4.48 0.00 0 12 100 2 788.39789 1575.78850 1.50 34.28 3786 3786 MS2 23/28 Linfeng_20120130_CHD1_5.raw High ILGADTSVDLEETGR Unambiguous 5 1 IPI00440493.2 CID 1.0000 0.0000 1 1 343 3.53 0.00 0 12 25 2 788.39594 1575.78459 -0.98 30.43 3091 3091 MS2 25/28 Linfeng_122411_rIgG_5.raw High TSIAIDTIINQK Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 433 3.18 0.00 0 41 100 2 658.87683 1316.74639 3.28 41.05 5352 5352 MS2 18/22 Linfeng_20120130_CHD1_5.raw High FENAFLSHVVSQHQALLGTIR Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 273 3.09 0.00 0 48 17 4 592.56946 2367.25600 -0.37 38.48 4201 4201 MS2 41/120 Linfeng_122411_rIgG_5.raw High TGAIVDVPVGEELLGR Unambiguous 4 1 IPI00440493.2 CID 1.0000 0.0000 1 1 393 2.99 0.00 0 33 25 3 542.30212 1624.89182 0.77 38.98 4268 4268 MS2 28/60 Linfeng_122411_rIgG_5.raw High VVDALGNAIDGK Unambiguous 3 1 IPI00440493.2 CID 1.0000 0.0000 1 1 501 2.92 0.00 0 21 100 2 586.32080 1171.63432 2.15 29.40 2639 2639 MS2 17/22 Linfeng_20120130_CHD1_5.raw High VVDALGNAIDGK Unambiguous 3 1 IPI00440493.2 CID 1.0000 0.0000 1 1 581 2.91 0.00 0 31 100 2 586.32129 1171.63530 2.99 29.24 2612 2612 MS2 18/22 Linfeng_20120130_CHD1_5.raw High VVDALGNAIDGK Unambiguous 3 1 IPI00440493.2 CID 1.0000 0.0000 1 1 524 2.89 0.00 0 19 100 2 586.32086 1171.63445 2.26 29.47 2649 2649 MS2 19/22 Linfeng_20120130_CHD1_5.raw High VVDALGNAIDGK Unambiguous 3 1 IPI00440493.2 CID 1.0000 0.0000 1 1 528 2.83 0.00 0 26 100 2 586.32104 1171.63481 2.57 29.17 2596 2596 MS2 19/22 Linfeng_20120130_CHD1_5.raw High EIVTNFLAGFEA Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 298 2.65 0.00 0 22 25 2 655.83582 1310.66435 1.22 48.84 5571 5571 MS2 18/22 Linfeng_122411_rIgG_5.raw High LKEIVTNFLAGFEA Unambiguous 2 1 IPI00440493.2 CID 1.0000 0.0000 1 1 343 2.33 0.00 1 17 25 2 776.42480 1551.84233 0.34 44.76 5046 5046 MS2 18/26 Linfeng_122411_rIgG_5.raw High VLSIGDGIAR Unambiguous 5 1 IPI00440493.2 CID 1.0000 0.0000 1 1 385 2.25 0.00 0 34 25 2 500.79266 1000.57805 -0.58 27.64 2707 2707 MS2 15/18 Linfeng_122411_rIgG_5.raw High AVDSLVPIGR Unambiguous 4 1 IPI00440493.2 CID 1.0000 0.0000 1 1 241 2.17 0.00 0 14 16 2 513.79987 1026.59245 -1.78 29.78 3002 3002 MS2 14/18 Linfeng_122411_rIgG_5.raw High AVDSLVPIGR Unambiguous 4 1 IPI00440493.2 CID 1.0000 0.0000 1 1 335 2.00 0.00 0 44 100 2 513.80194 1026.59661 2.26 34.24 3775 3775 MS2 14/18 Linfeng_20120130_CHD1_5.raw IPI00908723.1 "cDNA FLJ61039, highly similar to Stomatin-like protein 2" 23.79 2 5 5 6 19.61 23.79 5 6 311 33.3 8.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NTVVLFVPQQEAWVVER Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 363 4.33 0.00 0 6 25 2 1007.54083 2014.07439 -0.67 42.56 5018 5018 MS2 22/32 Linfeng_091311_rIgG_6.raw High AEQINQAAGEASAVLAK Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 428 3.89 0.00 0 9 25 2 835.93768 1670.86809 -1.67 31.63 3626 3626 MS2 25/32 Linfeng_091311_rIgG_6.raw High DVQGTDASLDEELDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 86 3.41 0.00 0 6 25 2 831.87451 1662.74175 -2.20 31.08 3556 3556 MS2 24/28 Linfeng_091311_rIgG_6.raw High ILEPGLNILIPVLDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 41 2.79 0.00 0 19 25 3 559.00952 1675.01401 -0.81 49.63 5900 5900 MS2 20/56 Linfeng_091311_rIgG_6.raw High ILEPGLNILIPVLDR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 35 2.79 0.00 0 75 25 2 838.01099 1675.01470 -0.40 49.62 5898 5898 MS2 18/28 Linfeng_091311_rIgG_6.raw High ATVLESEGTR Unambiguous 2 1 IPI00908723.1 CID 1.0000 0.0000 1 1 416 2.41 0.00 0 12 25 2 531.77399 1062.54070 -1.82 20.49 2129 2129 MS2 17/18 Linfeng_091311_rIgG_6.raw IPI00303813.5 Nucleolar protein 11 23.37 1 13 13 26 28.09 18.50 10 10 30.89 16.13 9 11 15.20 5.15 3 5 719 81.1 6.07 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DVQLLQLcLQQFPDIPESVTcAcLK Unambiguous 1 1 IPI00303813.5 C8(Carbamidomethyl); C21(Carbamidomethyl); C23(Carbamidomethyl) CID 1.0000 0.0000 1 1 259 5.00 0.00 0 13 25 3 992.49384 2975.46695 -0.23 49.66 5938 5938 MS2 41/96 Linfeng_091311_rIgG_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 506 4.02 0.00 0 0 100 2 796.93311 1592.85893 3.68 44.79 5685 5685 MS2 21/26 Linfeng_20120130_CHD1_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 349 3.61 0.00 0 7 25 2 796.93237 1592.85747 2.76 35.55 3628 3628 MS2 23/26 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 124 3.48 0.00 0 16 25 3 515.30927 1543.91324 2.44 40.42 4240 4240 MS2 32/52 Linfeng_122411_rIgG_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 510 3.48 0.00 0 22 100 2 796.93396 1592.86064 4.75 44.91 5713 5713 MS2 21/26 Linfeng_20120130_CHD1_4.raw High QTPDFHTVIGDTVTGLLER Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 380 3.36 0.00 0 5 25 3 700.36639 2099.08463 3.71 45.21 4844 4844 MS2 32/72 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 114 3.19 0.00 0 27 25 2 772.45947 1543.91167 1.42 40.38 4235 4235 MS2 21/26 Linfeng_122411_rIgG_4.raw High QTPDFHTVIGDTVTGLLER Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 385 3.04 0.00 0 25 25 3 700.36328 2099.07529 -0.74 46.42 5526 5526 MS2 33/72 Linfeng_091311_rIgG_4.raw High IWNNEDVNLDK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 415 3.03 0.00 0 0 100 2 680.33179 1359.65630 1.70 29.38 2506 2506 MS2 15/20 Linfeng_20120130_CHD1_4.raw High YTLLLGQDENSVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 355 2.99 0.00 0 15 25 2 796.92749 1592.84770 -3.37 36.64 4293 4293 MS2 22/26 Linfeng_091311_rIgG_4.raw High IETVISDEEVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 485 2.99 0.00 0 11 25 2 687.87323 1374.73918 2.08 30.58 2991 2991 MS2 18/22 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 318 2.96 0.00 0 33 25 3 428.23831 1282.70038 0.13 34.36 3480 3480 MS2 27/44 Linfeng_122411_rIgG_4.raw High ILSVQGTEPLVLFK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 152 2.79 0.00 0 14 25 2 772.45636 1543.90544 -2.62 41.77 4942 4942 MS2 20/26 Linfeng_091311_rIgG_4.raw High ATLSAEVYR Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 217 2.74 0.00 0 12 25 2 505.26831 1009.52934 -1.96 25.13 2765 2765 MS2 15/16 Linfeng_091311_rIgG_4.raw High IETVISDEEVIK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 466 2.68 0.00 0 40 25 2 687.87030 1374.73332 -2.18 31.89 3676 3676 MS2 17/22 Linfeng_091311_rIgG_4.raw High IWNNEDVNLDK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 213 2.67 0.00 0 4 25 2 680.32892 1359.65056 -2.52 29.00 3293 3293 MS2 18/20 Linfeng_091311_rIgG_4.raw High IWNNEDVNLDK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 249 2.48 0.00 0 20 25 2 680.33246 1359.65764 2.69 27.23 2548 2548 MS2 18/20 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 385 2.44 0.00 0 38 100 2 641.85681 1282.70635 4.78 42.86 5241 5241 MS2 15/22 Linfeng_20120130_CHD1_4.raw High TDQFLVTDSGR Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 234 2.34 0.00 0 68 25 2 619.80591 1238.60454 2.69 25.82 2361 2361 MS2 16/20 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 366 2.22 0.00 0 53 100 2 641.85645 1282.70561 4.21 42.52 5171 5171 MS2 14/22 Linfeng_20120130_CHD1_4.raw High cEVSSLAGALGK Unambiguous 1 1 IPI00303813.5 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 485 2.19 0.00 0 17 25 2 596.30640 1191.60552 1.39 29.67 2872 2872 MS2 19/22 Linfeng_122411_rIgG_4.raw High SQISVYSELNK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 383 2.16 0.00 0 9 25 2 634.33130 1267.65532 1.92 27.57 2593 2593 MS2 17/20 Linfeng_122411_rIgG_4.raw High GLEALLADPQQK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 346 2.14 0.00 0 0 25 2 641.85315 1282.69902 -0.93 34.31 3473 3473 MS2 18/22 Linfeng_122411_rIgG_4.raw High HPVLIFITEK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 177 2.10 0.00 0 42 25 2 598.85352 1196.69975 -3.40 33.65 3905 3905 MS2 12/18 Linfeng_091311_rIgG_4.raw High FQTLQTSK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 221 2.04 0.00 0 8 25 2 476.75726 952.50725 -2.73 20.89 2173 2173 MS2 11/14 Linfeng_091311_rIgG_4.raw High SQISVYSELNK Unambiguous 1 1 IPI00303813.5 CID 1.0000 0.0000 1 1 345 2.04 0.00 0 27 25 2 634.32867 1267.65007 -2.22 29.35 3339 3339 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00402184.4 Isoform 4 of Heterogeneous nuclear ribonucleoprotein Q 23.34 5 8 11 31 51.25 19.35 9 19 35.20 16.70 7 12 0.00 527 58.7 7.56 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AIEALKEFNEDGALAVLQQFK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 310 3.67 0.00 1 46 25 3 778.74902 2334.23252 -0.68 45.70 5437 5437 MS2 30/80 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 420 3.56 0.00 0 4 25 3 570.28815 1708.84989 -2.50 44.87 5332 5332 MS2 30/56 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 422 3.54 0.00 0 22 25 2 797.40808 1593.80889 2.59 49.31 5380 5380 MS2 19/24 Linfeng_122411_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 482 3.38 0.00 0 8 25 3 491.93295 1473.78431 3.21 38.52 4002 4002 MS2 29/48 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 412 3.34 0.00 0 33 25 2 797.40826 1593.80925 2.82 48.97 5312 5312 MS2 20/24 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 425 3.27 0.00 0 34 25 2 797.40637 1593.80547 0.45 50.39 5987 5987 MS2 19/24 Linfeng_091311_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 438 3.21 0.00 0 25 25 2 737.39575 1473.78423 3.15 38.48 3997 3997 MS2 20/24 Linfeng_122411_rIgG_4.raw High AIEALKEFNEDGALAVLQQFK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 316 3.14 0.00 1 26 25 3 778.75140 2334.23966 2.38 44.73 4785 4785 MS2 20/80 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 387 3.08 0.00 0 30 25 2 797.40601 1593.80474 -0.01 50.48 5985 5985 MS2 18/24 Linfeng_091311_rIgG_7.raw High VTEGLTDVILYHQPDDK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 363 3.01 0.00 0 10 19 3 648.32837 1942.97055 -2.66 34.79 4054 4054 MS2 29/64 Linfeng_091311_rIgG_4.raw High EFNEDGALAVLQQFK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 445 2.84 0.00 0 21 25 3 570.28784 1708.84897 -3.04 44.99 5320 5320 MS2 27/56 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 311 2.83 0.00 0 15 25 2 656.33179 1311.65630 1.78 25.18 2275 2275 MS2 17/22 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 398 2.81 0.00 0 34 25 2 797.40771 1593.80815 2.13 49.09 5228 5228 MS2 14/24 Linfeng_122411_rIgG_3.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 363 2.80 0.00 0 26 25 2 797.40582 1593.80437 -0.24 50.29 6017 6017 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 368 2.80 0.00 0 46 25 2 797.40741 1593.80754 1.75 49.30 4839 4839 MS2 14/24 Linfeng_122411_rIgG_7.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 436 2.79 0.00 0 10 25 3 531.94037 1593.80655 1.13 49.19 5615 5615 MS2 21/48 Linfeng_122411_rIgG_5.raw High EFNEDGALAVLQQFK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 415 2.76 0.00 0 43 25 2 854.92822 1708.84917 -2.92 45.01 5323 5323 MS2 18/28 Linfeng_091311_rIgG_6.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 273 2.72 0.00 0 12 25 2 656.32892 1311.65056 -2.59 27.85 3136 3136 MS2 18/22 Linfeng_091311_rIgG_4.raw High GVEAGPDLLQ Unambiguous 4 1 IPI00402184.4 CID 1.0000 0.0000 1 1 276 2.68 0.00 0 12 25 2 499.76202 998.51677 1.41 32.27 3212 3212 MS2 14/18 Linfeng_122411_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 270 2.65 0.00 0 9 25 2 656.32855 1311.64983 -3.15 28.13 3165 3165 MS2 17/22 Linfeng_091311_rIgG_6.raw High NLANTVTEEILEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 478 2.59 0.00 0 30 25 2 737.39215 1473.77703 -1.73 39.54 4661 4661 MS2 19/24 Linfeng_091311_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 380 2.57 0.00 0 53 25 2 797.40594 1593.80461 -0.09 50.29 6015 6015 MS2 16/24 Linfeng_091311_rIgG_3.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 322 2.54 0.00 0 8 25 2 464.25336 927.49944 -5.71 35.28 4157 4157 MS2 12/14 Linfeng_091311_rIgG_8.raw High TKEQILEEFSK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 403 2.53 0.00 1 23 25 3 451.24243 1351.71274 1.71 27.86 2632 2632 MS2 22/40 Linfeng_122411_rIgG_4.raw High TGYTLDVTTGQR Unambiguous 12 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 285 2.45 0.00 0 5 25 2 656.32867 1311.65007 -2.97 28.12 3141 3141 MS2 18/22 Linfeng_091311_rIgG_7.raw High DSDLSHVQNK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 189 2.29 0.00 0 19 25 2 571.77490 1142.54253 -1.01 15.76 1448 1448 MS2 13/18 Linfeng_091311_rIgG_4.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 287 2.29 0.00 0 13 25 2 464.25391 927.50054 -4.52 35.24 4094 4094 MS2 12/14 Linfeng_091311_rIgG_6.raw High AGPIWDLR Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 284 2.16 0.00 0 4 7 2 464.25629 927.50530 0.61 33.73 3399 3399 MS2 12/14 Linfeng_122411_rIgG_4.raw High DLFEDELVPLFEK Unambiguous 7 1 IPI00402184.4 CID 1.0000 0.0000 1 1 390 2.13 0.00 0 60 25 2 797.40472 1593.80217 -1.62 50.38 5990 5990 MS2 15/24 Linfeng_091311_rIgG_5.raw High DSDLSHVQNK Unambiguous 6 1 IPI00402184.4 CID 1.0000 0.0000 1 1 184 2.03 0.00 0 43 25 2 571.77435 1142.54143 -1.97 16.03 1476 1476 MS2 13/18 Linfeng_091311_rIgG_7.raw High LFVGSIPK Unambiguous 13 3 IPI00012074.3;IPI00402184.4;IPI00644055.3 CID 1.0000 0.0000 1 1 226 2.00 0.00 0 28 25 2 430.76456 860.52184 -2.58 30.61 3497 3497 MS2 11/14 Linfeng_091311_rIgG_6.raw IPI00414676.6 Heat shock protein HSP 90-beta 23.34 4 12 15 39 34.09 14.50 10 13 28.50 9.39 5 10 50.14 11.33 6 16 724 83.2 5.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GVVDSEDLPLNISR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 498 4.37 0.00 0 15 100 2 757.39960 1513.79192 4.08 41.01 4884 4884 MS2 21/26 Linfeng_20120130_CHD1_4.raw High GVVDSEDLPLNISR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 503 4.37 0.00 0 3 100 2 757.39948 1513.79167 3.92 41.15 4181 4181 MS2 19/26 Linfeng_20120130_CHD1_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 132 4.16 0.00 0 9 100 2 924.40540 1847.80351 3.49 36.81 3371 3371 MS2 17/28 Linfeng_20120130_CHD1_3.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 144 4.15 0.00 0 11 100 2 924.40509 1847.80290 3.16 36.57 4020 4020 MS2 20/28 Linfeng_20120130_CHD1_4.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 67 4.02 0.00 0 18 25 2 924.40485 1847.80242 2.89 32.45 3090 3090 MS2 23/28 Linfeng_122411_rIgG_3.raw High YHTSQSGDEmTSLSEYVSR Unambiguous 1 1 IPI00414676.6 M10(Oxidation) CID 1.0000 0.0000 1 1 117 3.78 0.00 0 10 100 3 731.65326 2192.94522 2.32 30.11 2645 2645 MS2 26/72 Linfeng_20120130_CHD1_4.raw High NPDDITQEEYGEFYK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 67 3.60 0.00 0 28 25 2 924.40381 1847.80034 1.77 32.81 3336 3336 MS2 20/28 Linfeng_122411_rIgG_6.raw High GVVDSEDLPLNISR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 551 3.42 0.00 0 34 100 2 757.39844 1513.78960 2.55 41.41 3593 3593 MS2 16/26 Linfeng_20120130_CHD1_6.raw High KHLEINPDHPIVETLR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 262 3.10 0.00 1 13 25 4 478.51529 1911.03933 -2.84 27.04 3033 3033 MS2 33/90 Linfeng_091311_rIgG_3.raw High HSQFIGYPITLYLEK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 2 404 3.02 0.00 0 6 25 3 603.65637 1808.95456 -2.01 40.24 4754 4754 MS2 30/56 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 314 2.95 0.00 0 5 23 2 638.32349 1275.63970 -2.40 28.64 3250 3250 MS2 18/22 Linfeng_091311_rIgG_3.raw Medium VILHLKEDQTEYLEER Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 399 2.90 0.00 1 33 25 4 504.51773 2015.04909 2.29 28.49 2716 2716 MS2 28/90 Linfeng_122411_rIgG_4.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 373 2.90 0.00 0 12 21 2 621.85437 1242.70146 -3.08 34.74 4055 4055 MS2 18/22 Linfeng_091311_rIgG_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 396 2.90 0.00 0 6 25 2 621.85718 1242.70708 1.44 33.66 3031 3031 MS2 17/22 Linfeng_122411_rIgG_9.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 353 2.89 0.00 0 12 25 2 621.85760 1242.70793 2.13 33.70 3394 3394 MS2 20/22 Linfeng_122411_rIgG_4.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 435 2.89 0.00 0 7 100 2 621.85870 1242.71013 3.89 41.83 4140 4140 MS2 16/22 Linfeng_20120130_CHD1_9.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 471 2.83 0.00 0 31 100 2 621.85822 1242.70915 3.11 41.59 4987 4987 MS2 16/22 Linfeng_20120130_CHD1_4.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 454 2.80 0.00 0 13 100 2 621.85840 1242.70952 3.40 41.99 4311 4311 MS2 13/22 Linfeng_20120130_CHD1_3.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 400 2.80 0.00 0 10 25 2 621.85626 1242.70525 -0.04 33.69 3130 3130 MS2 18/22 Linfeng_122411_rIgG_10.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 572 2.75 0.00 0 14 100 2 638.32660 1275.64592 2.49 28.13 2262 2262 MS2 15/22 Linfeng_20120130_CHD1_4.raw High HSQFIGYPITLYLEK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 2 395 2.73 0.00 0 20 25 3 603.65900 1808.96244 2.35 39.63 3777 3777 MS2 22/56 Linfeng_122411_rIgG_9.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 551 2.72 0.00 0 34 100 2 638.32776 1275.64824 4.30 28.84 2013 2013 MS2 14/22 Linfeng_20120130_CHD1_3.raw High HLEINPDHPIVETLR Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 335 2.69 0.00 0 15 25 3 594.98700 1782.94645 -1.87 30.10 3448 3448 MS2 25/56 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 68 2.68 0.00 0 8 25 2 656.28705 1311.56682 -2.40 25.33 2765 2765 MS2 14/18 Linfeng_091311_rIgG_7.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 568 2.67 0.00 0 15 100 2 638.32629 1275.64531 2.01 28.27 2287 2287 MS2 14/22 Linfeng_20120130_CHD1_4.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 558 2.67 0.00 0 31 100 2 638.32690 1275.64653 2.96 28.18 2269 2269 MS2 16/22 Linfeng_20120130_CHD1_4.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 67 2.62 0.00 0 9 25 2 656.28754 1311.56780 -1.65 24.93 2742 2742 MS2 16/18 Linfeng_091311_rIgG_3.raw High LGIHEDSTNR Unambiguous 2 1 IPI00414676.6 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 19 25 3 381.19052 1141.55701 -2.33 17.29 1675 1675 MS2 22/36 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 352 2.52 0.00 0 19 25 2 638.32306 1275.63884 -3.06 28.94 3255 3255 MS2 16/22 Linfeng_091311_rIgG_7.raw High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 409 2.47 0.00 0 7 25 2 621.85620 1242.70513 -0.13 4.47 471 471 MS2 17/22 Linfeng_122411_rIgG_7.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 64 2.38 0.00 0 15 25 2 656.28754 1311.56780 -1.65 25.30 2759 2759 MS2 14/18 Linfeng_091311_rIgG_9.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 372 2.34 0.00 0 11 25 2 580.79462 1160.58196 -1.24 28.38 3214 3214 MS2 16/18 Linfeng_091311_rIgG_3.raw High ELISNASDALDK Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 571 2.30 0.00 0 28 100 2 638.32758 1275.64787 4.02 28.68 1996 1996 MS2 13/22 Linfeng_20120130_CHD1_3.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 490 2.18 0.00 0 57 25 2 580.79614 1160.58501 1.38 24.77 2321 2321 MS2 14/18 Linfeng_122411_rIgG_5.raw High EQVANSAFVER Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 324 2.16 0.00 0 4 25 2 625.31036 1249.61345 -3.00 24.44 2673 2673 MS2 16/20 Linfeng_091311_rIgG_3.raw High IDIIPNPQER Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 465 2.16 0.00 0 42 100 2 597.82953 1194.65178 3.36 33.81 3446 3446 MS2 10/18 Linfeng_20120130_CHD1_4.raw High YIDQEELNK Unambiguous 6 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 238 2.12 0.00 0 40 25 2 576.28137 1151.55547 -2.14 22.64 2421 2421 MS2 14/16 Linfeng_091311_rIgG_3.raw High IDIIPNPQER Unambiguous 1 1 IPI00414676.6 CID 1.0000 0.0000 1 1 462 2.11 0.00 0 52 100 2 597.82983 1194.65239 3.87 34.05 3498 3498 MS2 10/18 Linfeng_20120130_CHD1_4.raw High SIYYITGESK Unambiguous 3 1 IPI00414676.6 CID 1.0000 0.0000 1 1 507 2.02 0.00 0 47 25 2 580.79700 1160.58672 2.86 26.08 2397 2397 MS2 14/18 Linfeng_122411_rIgG_4.raw IPI00013415.1 40S ribosomal protein S7 23.20 1 3 3 3 7.83 23.20 3 3 194 22.1 10.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLTAVHDAILEDLVFPSEIVGK Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 264 3.30 0.00 0 37 25 3 789.76526 2367.28122 0.21 47.34 5608 5608 MS2 30/84 Linfeng_091311_rIgG_9.raw High AIIIFVPVPQLK Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 29 2.32 0.00 0 38 25 2 669.43097 1337.85466 -0.69 45.35 5359 5359 MS2 15/22 Linfeng_091311_rIgG_9.raw High DVNFEFPEFQL Unambiguous 1 1 IPI00013415.1 CID 1.0000 0.0000 1 1 165 2.22 0.00 0 46 25 2 692.82623 1384.64519 2.29 53.33 6288 6288 MS2 12/20 Linfeng_091311_rIgG_9.raw IPI00019488.1 U3 small nucleolar ribonucleoprotein protein IMP3 22.83 1 4 4 4 9.49 22.83 4 4 0.00 184 21.8 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VGPDVVTDPAFLVTR Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 352 2.86 0.00 0 21 25 2 793.43115 1585.85503 -2.20 39.20 4587 4587 MS2 20/28 Linfeng_091311_rIgG_9.raw High HVLEYNEER Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 190 2.24 0.00 0 21 25 2 594.78381 1188.56035 -3.42 19.63 1962 1962 MS2 14/16 Linfeng_091311_rIgG_9.raw High LYALGLVPTR Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 196 2.24 0.00 0 15 25 2 551.83289 1102.65849 -3.13 36.83 4283 4283 MS2 17/18 Linfeng_091311_rIgG_9.raw High ASAALLDK Unambiguous 1 1 IPI00019488.1 CID 1.0000 0.0000 1 1 584 2.15 0.00 0 36 25 2 394.72742 788.44756 -4.74 21.15 2177 2177 MS2 11/14 Linfeng_091311_rIgG_9.raw IPI00789514.1 13 kDa protein 22.73 4 4 4 4 9.66 22.73 4 4 110 12.9 10.76 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HFNAPSHIR Unambiguous 3 1 IPI00789514.1 CID 1.0000 0.0000 1 1 434 2.86 0.00 0 23 25 3 360.18930 1078.55335 -0.72 17.72 1689 1689 MS2 22/32 Linfeng_091311_rIgG_9.raw High YVIYIER Unambiguous 4 1 IPI00789514.1 CID 1.0000 0.0000 1 1 204 2.40 0.00 0 11 25 2 478.26471 955.52214 -2.74 30.87 3512 3512 MS2 11/12 Linfeng_091311_rIgG_9.raw High KDDEVQVVR Unambiguous 4 1 IPI00789514.1 CID 1.0000 0.0000 1 1 464 2.34 0.00 1 41 25 2 544.28949 1087.57170 -2.36 18.13 1748 1748 MS2 14/16 Linfeng_091311_rIgG_9.raw High DDEVQVVR Unambiguous 4 1 IPI00789514.1 CID 1.0000 0.0000 1 1 263 2.07 0.00 0 29 25 2 480.24133 959.47539 -4.08 22.10 2312 2312 MS2 13/14 Linfeng_091311_rIgG_9.raw IPI00413611.1 DNA topoisomerase 1 22.61 1 13 13 23 38.28 15.16 8 12 14.62 6.54 4 5 14.79 6.93 5 6 765 90.7 9.31 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AGNEKEEGETADTVGccSLR Unambiguous 1 1 IPI00413611.1 C16(Carbamidomethyl); C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 4.19 0.00 1 5 21 3 728.31250 2182.92295 -5.09 21.97 2330 2330 MS2 40/76 Linfeng_091311_rIgG_3.raw High VEHINLHPELDGQEYVVEFDFLGK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 255 4.06 0.00 0 7 25 4 707.60327 2827.39126 -0.92 42.32 5016 5016 MS2 38/138 Linfeng_091311_rIgG_3.raw High AGNEKEEGETADTVGccSLR Unambiguous 1 1 IPI00413611.1 C16(Carbamidomethyl); C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 30 4.00 0.00 1 14 25 3 728.31415 2182.92789 -2.82 21.39 1992 1992 MS2 32/76 Linfeng_091311_rIgG_1.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 453 3.67 0.00 0 27 100 2 754.41284 1507.81841 4.57 33.83 2787 2787 MS2 17/24 Linfeng_20120130_CHD1_3.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 396 3.54 0.00 0 3 25 2 754.40790 1507.80852 -1.99 30.48 3499 3499 MS2 18/24 Linfeng_091311_rIgG_3.raw High GPVFAPPYEPLPENVK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 333 3.51 0.00 0 18 25 2 877.45978 1753.91228 -2.14 36.42 4272 4272 MS2 21/30 Linfeng_091311_rIgG_3.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 377 3.40 0.00 0 2 25 2 754.41107 1507.81487 2.22 29.02 2643 2643 MS2 17/24 Linfeng_122411_rIgG_3.raw High KLEEEEDGKLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 472 3.18 0.00 2 40 25 3 439.90051 1317.68698 -2.07 15.33 1398 1398 MS2 24/40 Linfeng_091311_rIgG_3.raw High IANFKIEPPGLFR Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 255 3.15 0.00 1 5 25 3 501.28949 1501.85392 0.85 35.84 3523 3523 MS2 27/48 Linfeng_122411_rIgG_3.raw High FAWAIDMADEDYEF Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 21 2.96 0.00 0 34 25 2 861.85657 1722.70586 3.81 49.75 5311 5311 MS2 17/26 Linfeng_122411_rIgG_3.raw High KLEEEEDGKLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 468 2.93 0.00 2 47 25 3 439.90039 1317.68662 -2.35 16.14 1503 1503 MS2 22/40 Linfeng_091311_rIgG_4.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 395 2.89 0.00 0 48 25 3 503.27402 1507.80750 -2.67 30.38 3487 3487 MS2 24/48 Linfeng_091311_rIgG_3.raw High GPVFAPPYEPLPENVK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 331 2.73 0.00 0 17 25 2 877.45966 1753.91203 -2.28 36.56 4282 4282 MS2 20/30 Linfeng_091311_rIgG_4.raw High TYNASITLQQQLK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 441 2.66 0.00 0 25 25 3 503.27655 1507.81510 2.37 29.02 2642 2642 MS2 25/48 Linfeng_122411_rIgG_3.raw High AVAILcNHQR Unambiguous 1 1 IPI00413611.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 376 2.53 0.00 0 7 25 2 591.31262 1181.61797 -2.43 20.90 2183 2183 MS2 16/18 Linfeng_091311_rIgG_3.raw High AEEVATFFAK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 274 2.45 0.00 0 24 25 2 556.78479 1112.56230 -0.01 32.01 3033 3033 MS2 16/18 Linfeng_122411_rIgG_3.raw High AEEVATFFAK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 481 2.39 0.00 0 27 100 2 556.78674 1112.56621 3.50 38.80 3762 3762 MS2 14/18 Linfeng_20120130_CHD1_3.raw High AEEVATFFAK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 285 2.37 0.00 0 30 25 2 556.78314 1112.55901 -2.97 33.24 3862 3862 MS2 16/18 Linfeng_091311_rIgG_3.raw High ImPEDIIINcSK Unambiguous 1 1 IPI00413611.1 M2(Oxidation); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 543 2.33 0.00 0 41 100 2 724.86230 1448.71733 3.38 37.53 3508 3508 MS2 15/22 Linfeng_20120130_CHD1_3.raw High LEVQATDREENK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 367 2.33 0.00 1 18 25 2 716.35657 1431.70586 -1.13 17.59 1718 1718 MS2 17/22 Linfeng_091311_rIgG_3.raw High NLQLFmENK Unambiguous 1 1 IPI00413611.1 M6(Oxidation) CID 1.0000 0.0000 1 1 532 2.22 0.00 0 53 100 2 576.79303 1152.57878 6.04 33.68 2758 2758 MS2 12/16 Linfeng_20120130_CHD1_3.raw High NLQLFmENK Unambiguous 1 1 IPI00413611.1 M6(Oxidation) CID 1.0000 0.0000 1 1 532 2.12 0.00 0 66 100 2 576.79358 1152.57988 6.99 33.53 2725 2725 MS2 12/16 Linfeng_20120130_CHD1_3.raw High AVALYFIDK Unambiguous 1 1 IPI00413611.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 24 100 2 520.29718 1039.58708 4.60 45.19 4954 4954 MS2 12/16 Linfeng_20120130_CHD1_3.raw IPI00006379.1 Nucleolar protein 58 22.50 2 9 9 21 40.48 19.85 8 13 24.47 12.85 5 8 0.00 529 59.5 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 243 4.54 0.00 0 42 25 2 957.47040 1913.93352 1.08 52.13 6230 6230 MS2 25/34 Linfeng_091311_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 295 4.33 0.00 0 11 25 3 638.65063 1913.93735 3.08 50.66 5802 5802 MS2 33/68 Linfeng_122411_rIgG_5.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 311 4.27 0.00 0 18 25 3 638.64880 1913.93186 0.21 52.30 6223 6223 MS2 31/68 Linfeng_091311_rIgG_5.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 392 3.89 0.00 0 8 25 3 578.64410 1733.91776 -2.53 30.61 3509 3509 MS2 33/60 Linfeng_091311_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 306 3.77 0.00 0 15 25 3 638.64886 1913.93204 0.31 52.11 6227 6227 MS2 33/68 Linfeng_091311_rIgG_4.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 367 3.72 0.00 0 9 25 3 578.64642 1733.92472 1.49 29.47 2846 2846 MS2 31/60 Linfeng_122411_rIgG_4.raw High KIEQVDKEDEITEK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 425 3.55 0.00 2 8 25 3 568.62646 1703.86484 -2.95 19.51 1978 1978 MS2 26/52 Linfeng_091311_rIgG_4.raw High TYDPSGDSTLPTcSK Unambiguous 1 1 IPI00006379.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.29 0.00 0 6 25 2 814.85760 1628.70793 -1.82 24.37 2658 2658 MS2 23/28 Linfeng_091311_rIgG_4.raw High LSELLPEEVEAEVK Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 367 3.07 0.00 0 6 25 2 792.92456 1584.84184 3.19 36.62 3763 3763 MS2 21/26 Linfeng_122411_rIgG_4.raw High YGLIYHASLVGQTSPK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 414 3.05 0.00 0 27 25 3 578.64374 1733.91666 -3.16 30.83 3473 3473 MS2 27/60 Linfeng_091311_rIgG_5.raw High LSELLPEEVEAEVK Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 424 2.86 0.00 0 23 25 3 528.95203 1584.84153 2.99 36.72 3776 3776 MS2 31/52 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 346 2.84 0.00 0 5 25 3 443.22702 1327.66651 1.80 31.62 3127 3127 MS2 22/36 Linfeng_122411_rIgG_4.raw High FQDTAEALAAFTALMEGK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 299 2.82 0.00 0 35 25 3 638.65033 1913.93644 2.60 50.61 5499 5499 MS2 24/68 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 335 2.72 0.00 0 11 25 2 664.33643 1327.66557 1.10 31.63 3128 3128 MS2 14/18 Linfeng_122411_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 313 2.61 0.00 0 15 25 3 443.22519 1327.66101 -2.33 32.79 3796 3796 MS2 19/36 Linfeng_091311_rIgG_4.raw High TQLYEYLQNR Unambiguous 2 1 IPI00006379.1 CID 1.0000 0.0000 1 1 293 2.52 0.00 0 32 25 2 664.33411 1327.66094 -2.39 32.69 3782 3782 MS2 15/18 Linfeng_091311_rIgG_4.raw Medium LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 84 2.46 0.00 0 2 25 3 440.93716 1320.79694 -2.21 31.80 3664 3664 MS2 26/48 Linfeng_091311_rIgG_4.raw High IISDNLTYcK Unambiguous 2 1 IPI00006379.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.27 0.00 0 23 25 2 613.80621 1226.60515 -2.80 26.95 3013 3013 MS2 14/18 Linfeng_091311_rIgG_4.raw High LIAHAGSLLNLAK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 83 2.17 0.00 0 33 25 2 660.90216 1320.79704 -2.13 31.87 3673 3673 MS2 20/24 Linfeng_091311_rIgG_4.raw High IISDNLTYcK Unambiguous 2 1 IPI00006379.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.10 0.00 0 39 25 2 613.80945 1226.61162 2.47 22.17 1886 1886 MS2 13/18 Linfeng_122411_rIgG_4.raw High LQEVDSLWK Unambiguous 1 1 IPI00006379.1 CID 1.0000 0.0000 1 1 503 2.09 0.00 0 16 25 2 559.29688 1117.58647 -2.13 33.80 3925 3925 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00456758.4 60S ribosomal protein L27a 22.30 1 3 3 5 12.64 22.30 3 5 148 16.6 11.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NQSFcPTVNLDK Unambiguous 1 1 IPI00456758.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 394 3.13 0.00 0 28 100 2 711.84094 1422.67461 4.47 30.80 2364 2364 MS2 16/22 Linfeng_20120130_CHD1_9.raw High NQSFcPTVNLDK Unambiguous 1 1 IPI00456758.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 424 2.98 0.00 0 23 100 2 711.83966 1422.67204 2.67 30.68 2345 2345 MS2 16/22 Linfeng_20120130_CHD1_9.raw High NQSFcPTVNLDK Unambiguous 1 1 IPI00456758.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 417 2.28 0.00 0 17 100 2 711.84033 1422.67339 3.61 30.48 2318 2318 MS2 14/22 Linfeng_20120130_CHD1_9.raw High LWTLVSEQTR Unambiguous 1 1 IPI00456758.4 CID 1.0000 0.0000 1 1 616 2.14 0.00 0 37 100 2 616.83789 1232.66850 4.13 41.54 4095 4095 MS2 10/18 Linfeng_20120130_CHD1_9.raw High TGAAPIIDVVR Unambiguous 1 1 IPI00456758.4 CID 1.0000 0.0000 1 1 249 2.11 0.00 0 25 100 2 556.32837 1111.64946 2.17 36.71 3342 3342 MS2 14/20 Linfeng_20120130_CHD1_9.raw IPI00895865.1 "electron transfer flavoprotein subunit alpha, mitochondrial isoform b" 22.18 3 4 4 5 15.13 22.18 4 5 284 30.0 8.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLLPEELTPLILATQK Unambiguous 2 1 IPI00895865.1 CID 1.0000 0.0000 1 1 65 3.39 0.00 0 12 25 3 579.34613 1736.02384 1.92 46.12 4442 4442 MS2 29/60 Linfeng_122411_rIgG_7.raw High ASSTSPVEISEWLDQK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 314 3.14 0.00 0 35 25 3 592.96118 1776.86899 2.18 38.47 3477 3477 MS2 27/60 Linfeng_122411_rIgG_7.raw High GLLPEELTPLILATQK Unambiguous 2 1 IPI00895865.1 CID 1.0000 0.0000 1 1 57 2.96 0.00 0 17 25 2 868.51654 1736.02580 3.05 46.14 4444 4444 MS2 20/30 Linfeng_122411_rIgG_7.raw High LEVAPISDIIAIK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 80 2.87 0.00 0 12 25 2 691.42023 1381.83318 2.18 41.21 3820 3820 MS2 20/24 Linfeng_122411_rIgG_7.raw High GTSFDAAATSGGSASSEK Unambiguous 3 1 IPI00895865.1 CID 1.0000 0.0000 1 1 94 2.77 0.00 0 37 25 2 815.86578 1630.72429 3.13 20.42 1493 1493 MS2 19/34 Linfeng_122411_rIgG_7.raw IPI00789324.3 "cDNA FLJ60424, highly similar to Junction plakoglobin" 21.85 6 1 12 73 48.05 6.57 4 20 46.21 13.85 8 18 95.08 15.81 9 35 563 62.6 5.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SAIVHLINYQDDAELATR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 520 5.78 0.00 0 17 100 3 677.02014 2029.04587 5.37 46.07 5966 5966 MS2 30/68 Linfeng_20120130_CHD1_4.raw High SAIVHLINYQDDAELATR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 413 4.05 0.00 0 9 25 3 677.01782 2029.03891 1.94 33.28 3225 3225 MS2 29/68 Linfeng_122411_rIgG_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 601 3.44 0.00 0 30 100 2 515.30231 1029.59734 3.30 36.62 4242 4242 MS2 15/16 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 561 3.38 0.00 0 32 100 2 515.30255 1029.59783 3.77 36.55 4228 4228 MS2 15/16 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 554 3.22 0.00 0 11 100 2 515.30261 1029.59795 3.89 37.25 4154 4154 MS2 15/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 631 3.16 0.00 0 38 100 2 515.30200 1029.59673 2.71 35.98 4191 4191 MS2 15/16 Linfeng_20120130_CHD1_5.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 457 3.09 0.00 0 38 100 2 714.40863 1427.80998 4.20 40.76 4716 4716 MS2 17/26 Linfeng_20120130_CHD1_1.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 440 3.02 0.00 1 12 25 2 593.35083 1185.69438 -0.57 27.61 2238 2238 MS2 17/18 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 622 3.02 0.00 0 29 100 2 515.30243 1029.59758 3.54 36.62 3333 3333 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 575 3.01 0.00 0 36 100 2 515.30249 1029.59770 3.65 36.14 3775 3775 MS2 15/16 Linfeng_20120130_CHD1_1.raw High AALEDTLAETEAR Unambiguous 3 1 IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.98 0.00 0 52 25 2 695.34784 1389.68840 1.95 27.18 2182 2182 MS2 15/24 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 572 2.96 0.00 0 23 100 2 515.30249 1029.59770 3.65 36.54 3460 3460 MS2 15/16 Linfeng_20120130_CHD1_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 574 2.95 0.00 0 20 100 2 515.30249 1029.59770 3.65 37.20 3443 3443 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 624 2.94 0.00 0 26 100 2 515.30243 1029.59758 3.54 36.25 3953 3953 MS2 15/16 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 582 2.91 0.00 0 25 100 2 515.30261 1029.59795 3.89 36.97 3402 3402 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 583 2.91 0.00 0 28 100 2 515.30255 1029.59783 3.77 37.16 3436 3436 MS2 15/16 Linfeng_20120130_CHD1_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 615 2.81 0.00 0 19 100 2 515.30200 1029.59673 2.71 36.95 3030 3030 MS2 15/16 Linfeng_20120130_CHD1_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 620 2.78 0.00 0 21 100 2 515.30231 1029.59734 3.30 37.17 4005 4005 MS2 15/16 Linfeng_20120130_CHD1_1.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 353 2.77 0.00 0 28 100 2 714.40918 1427.81108 4.97 40.90 4747 4747 MS2 18/26 Linfeng_20120130_CHD1_1.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 409 2.73 0.00 0 50 25 2 561.79492 1122.58257 3.18 22.47 1971 1971 MS2 15/16 Linfeng_122411_rIgG_6.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 386 2.72 0.00 0 16 25 2 561.79132 1122.57536 -3.24 24.88 2701 2701 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 621 2.71 0.00 0 24 100 2 515.30182 1029.59636 2.35 36.91 3019 3019 MS2 15/16 Linfeng_20120130_CHD1_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.70 0.00 0 8 25 2 515.30164 1029.59599 1.99 30.73 2739 2739 MS2 15/16 Linfeng_122411_rIgG_10.raw High ALmGSPQLVAAVVR Unambiguous 5 2 IPI00554711.3;IPI00789324.3 M3(Oxidation) CID 1.0000 0.0000 1 1 378 2.68 0.00 0 52 100 2 714.40723 1427.80718 2.23 40.63 4807 4807 MS2 19/26 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 484 2.64 0.00 0 7 25 2 515.30188 1029.59648 2.47 31.10 3060 3060 MS2 15/16 Linfeng_122411_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 397 2.61 0.00 0 39 25 2 561.79138 1122.57549 -3.13 24.59 2430 2430 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 565 2.59 0.00 0 25 25 2 515.29840 1029.58953 -4.29 32.53 3810 3810 MS2 15/16 Linfeng_091311_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 385 2.57 0.00 0 38 25 2 561.79156 1122.57585 -2.80 24.70 2745 2745 MS2 15/16 Linfeng_091311_rIgG_2.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 617 2.56 0.00 0 31 100 2 515.30212 1029.59697 2.94 36.77 2999 2999 MS2 14/16 Linfeng_20120130_CHD1_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 608 2.56 0.00 0 36 100 2 515.30212 1029.59697 2.94 36.71 2988 2988 MS2 15/16 Linfeng_20120130_CHD1_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 377 2.53 0.00 0 18 25 2 561.79163 1122.57598 -2.70 24.72 2713 2713 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.53 0.00 0 18 25 2 515.30151 1029.59575 1.76 31.04 2938 2938 MS2 15/16 Linfeng_122411_rIgG_2.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 343 2.53 0.00 0 25 25 2 561.79181 1122.57634 -2.37 24.93 2679 2679 MS2 15/16 Linfeng_091311_rIgG_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 475 2.52 0.00 0 4 25 2 515.30170 1029.59612 2.11 31.47 3164 3164 MS2 15/16 Linfeng_122411_rIgG_6.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 478 2.51 0.00 0 8 25 2 515.30121 1029.59514 1.16 30.99 2901 2901 MS2 15/16 Linfeng_122411_rIgG_3.raw High RVLDELTLAR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 322 2.51 0.00 1 44 100 2 593.35254 1185.69780 2.31 41.52 4977 4977 MS2 14/18 Linfeng_20120130_CHD1_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.48 0.00 0 9 25 2 515.29877 1029.59026 -3.58 32.74 3774 3774 MS2 15/16 Linfeng_091311_rIgG_6.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 515 2.47 0.00 0 25 100 2 610.80280 1220.59831 3.50 31.89 3010 3010 MS2 19/20 Linfeng_20120130_CHD1_4.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 548 2.46 0.00 0 31 100 2 646.82556 1292.64385 2.73 40.51 4938 4938 MS2 13/20 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.44 0.00 0 4 2 2 515.30005 1029.59282 -1.09 3.82 379 379 MS2 15/16 Linfeng_122411_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 491 2.44 0.00 0 12 25 2 515.30133 1029.59538 1.40 31.00 2837 2837 MS2 15/16 Linfeng_122411_rIgG_8.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 398 2.44 0.00 0 38 25 2 671.36530 1341.72331 -2.07 29.23 3323 3323 MS2 17/22 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 375 2.42 0.00 0 16 25 2 515.29895 1029.59062 -3.22 32.46 3760 3760 MS2 15/16 Linfeng_091311_rIgG_3.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 374 2.42 0.00 0 8 25 2 515.29877 1029.59026 -3.58 32.71 3754 3754 MS2 15/16 Linfeng_091311_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 516 2.40 0.00 0 22 25 2 515.30164 1029.59599 1.99 31.52 2605 2605 MS2 15/16 Linfeng_122411_rIgG_7.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 404 2.40 0.00 0 17 25 2 561.79083 1122.57439 -4.11 25.03 2784 2784 MS2 15/16 Linfeng_091311_rIgG_8.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 546 2.40 0.00 0 29 100 2 646.82629 1292.64531 3.86 40.49 4781 4781 MS2 13/20 Linfeng_20120130_CHD1_4.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 515 2.39 0.00 0 48 100 2 610.80255 1220.59783 3.10 32.31 3289 3289 MS2 18/20 Linfeng_20120130_CHD1_10.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 559 2.39 0.00 0 29 25 2 515.29865 1029.59001 -3.81 32.52 3759 3759 MS2 15/16 Linfeng_091311_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 513 2.37 0.00 0 34 25 2 515.30164 1029.59599 1.99 30.99 2683 2683 MS2 15/16 Linfeng_122411_rIgG_9.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 371 2.35 0.00 0 8 22 2 515.29895 1029.59062 -3.22 32.64 3713 3713 MS2 15/16 Linfeng_091311_rIgG_5.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 548 2.35 0.00 0 39 100 2 646.82660 1292.64592 4.34 40.34 4910 4910 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 403 2.34 0.00 0 28 25 2 561.79144 1122.57561 -3.02 24.74 2709 2709 MS2 15/16 Linfeng_091311_rIgG_4.raw High LEQEIATYR Unambiguous 15 4 IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 402 2.33 0.00 0 44 25 2 561.79175 1122.57622 -2.48 25.00 2743 2743 MS2 15/16 Linfeng_091311_rIgG_6.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 219 2.28 0.00 0 22 17 2 404.20316 807.39903 -0.69 4.20 478 478 MS2 11/12 Linfeng_122411_rIgG_4.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 571 2.28 0.00 0 4 25 2 515.29865 1029.59001 -3.81 32.78 3769 3769 MS2 15/16 Linfeng_091311_rIgG_7.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 383 2.26 0.00 0 3 5 2 515.29987 1029.59245 -1.44 30.91 3160 3160 MS2 15/16 Linfeng_122411_rIgG_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 566 2.24 0.00 0 53 25 2 515.29791 1029.58855 -5.24 32.60 3506 3506 MS2 15/16 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 586 2.22 0.00 0 29 25 2 515.29822 1029.58916 -4.64 32.73 3823 3823 MS2 15/16 Linfeng_091311_rIgG_8.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 534 2.20 0.00 0 6 100 2 646.82574 1292.64421 3.01 41.06 5045 5045 MS2 15/20 Linfeng_20120130_CHD1_10.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 482 2.19 0.00 0 35 100 2 610.80316 1220.59905 4.10 31.95 2877 2877 MS2 17/20 Linfeng_20120130_CHD1_1.raw High mSVEADINGLR Unambiguous 7 2 IPI00384444.6;IPI00789324.3 M1(Oxidation) CID 1.0000 0.0000 1 1 472 2.18 0.00 0 51 100 2 610.80322 1220.59917 4.20 32.43 2651 2651 MS2 15/20 Linfeng_20120130_CHD1_2.raw High IVLQIDNAR Unambiguous 5 2 IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 281 2.17 0.00 0 18 25 2 521.30664 1041.60600 0.80 25.81 2459 2459 MS2 15/16 Linfeng_122411_rIgG_5.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 380 2.10 0.00 0 18 25 2 515.29907 1029.59087 -2.99 32.71 3898 3898 MS2 15/16 Linfeng_091311_rIgG_10.raw High LLNDEDPVVVTK Unambiguous 2 2 IPI00789324.3;IPI00554711.3 CID 1.0000 0.0000 1 1 397 2.10 0.00 0 40 25 2 671.36755 1341.72783 1.30 28.07 2718 2718 MS2 14/22 Linfeng_122411_rIgG_6.raw High LAEPSQLLK Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 358 2.10 0.00 0 40 100 2 499.79926 998.59123 3.12 31.13 2859 2859 MS2 11/16 Linfeng_20120130_CHD1_4.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 234 2.09 0.00 0 12 25 2 404.20203 807.39678 -3.49 24.21 2377 2377 MS2 11/12 Linfeng_091311_rIgG_1.raw High VLDELTLAR Unambiguous 20 4 IPI00384444.6;IPI00217963.3;IPI00450768.7;IPI00789324.3 CID 1.0000 0.0000 1 1 517 2.07 0.00 0 30 25 2 515.30164 1029.59599 1.99 28.40 2341 2341 MS2 14/16 Linfeng_122411_rIgG_9.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High LAEPSQLLK Unambiguous 5 2 IPI00554711.3;IPI00789324.3 CID 1.0000 0.0000 1 1 353 2.05 0.00 0 18 100 2 499.79935 998.59142 3.30 32.15 3067 3067 MS2 11/16 Linfeng_20120130_CHD1_4.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High IVLQIDNAR Unambiguous 5 2 IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 33 100 2 521.30756 1041.60784 2.56 28.48 2457 2457 MS2 13/16 Linfeng_20120130_CHD1_5.raw High TDLEmQIEGLK Unambiguous 6 2 IPI00217963.3;IPI00789324.3 M5(Oxidation) CID 1.0000 0.0000 1 1 550 2.01 0.00 0 38 100 2 646.82593 1292.64458 3.30 40.38 4762 4762 MS2 14/20 Linfeng_20120130_CHD1_4.raw IPI00947128.1 Isoform 2 of UAP56-interacting factor 21.58 4 5 5 7 7.71 13.01 3 3 9.89 15.75 4 4 292 33.0 11.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RPNGVITGLAAR Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 165 3.02 0.00 0 19 25 3 408.91144 1224.71976 2.09 20.61 1734 1734 MS2 22/44 Linfeng_122411_rIgG_6.raw High VQAQLNTEQLLDDVVAK Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 429 2.93 0.00 0 22 25 3 628.67230 1884.00235 -2.66 41.30 4860 4860 MS2 28/64 Linfeng_091311_rIgG_6.raw High LLQQSGAQQFR Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 446 2.65 0.00 0 32 25 2 638.34497 1275.68266 1.73 20.56 1728 1728 MS2 17/20 Linfeng_122411_rIgG_6.raw High LLQQSGAQQFR Unambiguous 2 1 IPI00947128.1 CID 1.0000 0.0000 1 1 412 2.65 0.00 0 7 25 2 638.34204 1275.67681 -2.87 24.43 2665 2665 MS2 16/20 Linfeng_091311_rIgG_6.raw High NIEQYFPVLK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 359 2.20 0.00 0 4 25 2 625.84412 1250.68096 2.37 39.47 4168 4168 MS2 13/18 Linfeng_122411_rIgG_6.raw High NIEQYFPVLK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 362 2.13 0.00 0 9 25 2 625.84131 1250.67534 -2.12 40.59 4771 4771 MS2 15/18 Linfeng_091311_rIgG_6.raw High GVPLQFDINSVGK Unambiguous 4 1 IPI00947128.1 CID 1.0000 0.0000 1 1 367 2.02 0.00 0 7 25 2 687.37543 1373.74358 0.85 35.99 3734 3734 MS2 19/24 Linfeng_122411_rIgG_6.raw IPI00645646.1 17 kDa protein 21.52 2 1 3 4 10.63 21.52 3 4 158 17.3 9.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFLAGGIAAAISK Unambiguous 2 1 IPI00645646.1 CID 1.0000 0.0000 1 1 322 3.14 0.00 0 27 25 2 617.34692 1233.68657 2.21 40.09 3678 3678 MS2 21/24 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 494 3.00 0.00 0 12 25 3 482.91943 1446.74375 1.44 41.36 3840 3840 MS2 28/44 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 379 2.48 0.00 0 4 25 2 723.87616 1446.74504 2.34 41.30 3832 3832 MS2 20/22 Linfeng_122411_rIgG_7.raw High EQGVLSFWR Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 341 2.01 0.00 0 5 25 2 561.29144 1121.57561 1.55 37.97 3417 3417 MS2 13/16 Linfeng_122411_rIgG_7.raw IPI00644497.4 Conserved hypothetical protein 21.50 9 3 5 6 14.96 21.50 5 6 293 31.8 5.62 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QEPSQGTTTFAVTSILR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 414 3.28 0.00 0 21 25 3 612.65283 1835.94394 -3.21 38.10 4602 4602 MS2 25/64 Linfeng_091311_rIgG_10.raw High DASGVTFTWTPSSGK Unambiguous 9 1 IPI00644497.4 CID 1.0000 0.0000 1 1 186 2.54 0.00 0 7 25 2 770.86304 1540.71880 -5.90 35.25 4231 4231 MS2 21/28 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 304 2.50 0.00 0 17 25 2 607.31860 1213.62993 -2.08 29.17 3419 3419 MS2 18/18 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 301 2.49 0.00 0 5 25 2 607.31842 1213.62956 -2.38 29.37 3312 3312 MS2 17/18 Linfeng_091311_rIgG_9.raw High TFTcTAAYPESK Unambiguous 9 1 IPI00644497.4 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 84 2.14 0.00 0 3 25 2 688.31067 1375.61406 -4.23 24.50 2764 2764 MS2 16/22 Linfeng_091311_rIgG_10.raw High TPLTATLSK Unambiguous 8 1 IPI00644497.4 CID 1.0000 0.0000 1 1 439 2.02 0.00 0 11 23 2 466.27405 931.54082 -5.47 25.31 2881 2881 MS2 13/16 Linfeng_091311_rIgG_10.raw IPI00003362.2 HSPA5 protein 21.37 1 8 10 14 9.56 6.56 3 3 17.58 12.98 6 6 16.71 11.15 5 5 655 72.4 5.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SQIFSTASDNQPTVTIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 546 4.31 0.00 0 9 100 2 918.97382 1836.94036 3.54 34.74 3654 3654 MS2 25/32 Linfeng_20120130_CHD1_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 229 3.79 0.00 0 7 25 2 839.40637 1677.80547 -1.46 30.04 3432 3432 MS2 22/28 Linfeng_091311_rIgG_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 464 3.65 0.00 0 4 100 2 839.41040 1677.81352 3.34 32.61 3173 3173 MS2 17/28 Linfeng_20120130_CHD1_4.raw High VTHAVVTVPAYFNDAQR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 452 3.63 0.00 0 21 25 3 629.99640 1887.97464 1.80 30.45 2974 2974 MS2 26/64 Linfeng_122411_rIgG_4.raw High IINEPTAAAIAYGLDK Unambiguous 5 2 IPI00003865.1;IPI00003362.2 CID 1.0000 0.0000 1 1 457 3.50 0.00 0 10 100 2 830.45459 1659.90190 3.98 44.86 5701 5701 MS2 23/30 Linfeng_20120130_CHD1_4.raw High VTHAVVTVPAYFNDAQR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 447 3.45 0.00 0 11 25 3 629.99396 1887.96732 -2.08 31.73 3655 3655 MS2 27/64 Linfeng_091311_rIgG_4.raw High NQLTSNPENTVFDAK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 295 3.13 0.00 0 10 25 2 839.41052 1677.81377 3.48 28.51 2719 2719 MS2 21/28 Linfeng_122411_rIgG_4.raw High TWNDPSVQQDIK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 276 2.88 0.00 0 44 25 2 715.85114 1430.69499 2.73 25.49 2317 2317 MS2 18/22 Linfeng_122411_rIgG_4.raw High KSDIDEIVLVGGSTR Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 457 2.77 0.00 1 12 25 3 530.29077 1588.85776 2.27 31.14 3065 3065 MS2 21/56 Linfeng_122411_rIgG_4.raw High ITPSYVAFTPEGER Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 537 2.64 0.00 0 5 100 2 783.89667 1566.78606 3.92 37.53 4202 4202 MS2 16/26 Linfeng_20120130_CHD1_4.raw High ELEEIVQPIISK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 280 2.63 0.00 0 23 25 2 699.39972 1397.79216 2.48 35.04 3564 3564 MS2 16/22 Linfeng_122411_rIgG_4.raw High NELESYAYSLK Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 394 2.62 0.00 0 79 100 2 658.82465 1316.64202 3.88 39.11 4503 4503 MS2 15/20 Linfeng_20120130_CHD1_4.raw High ITPSYVAFTPEGER Unambiguous 1 1 IPI00003362.2 CID 1.0000 0.0000 1 1 314 2.53 0.00 0 7 25 2 783.89496 1566.78264 1.74 31.64 3130 3130 MS2 19/26 Linfeng_122411_rIgG_4.raw High VEIIANDQGNR Unambiguous 25 3 IPI00911039.1;IPI00003362.2;IPI00003865.1 CID 1.0000 0.0000 1 2 357 2.32 0.00 0 15 25 2 614.81610 1228.62493 -2.58 22.64 2415 2415 MS2 19/20 Linfeng_091311_rIgG_4.raw IPI00300127.3 N-acetyltransferase 10 21.37 2 15 15 27 58.05 21.37 15 19 25.13 8.68 6 8 0.00 1025 115.6 8.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GFDALQYQEHLDYEIIQSLNPEFNK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 236 4.65 0.00 0 15 25 3 1004.48767 3011.44846 2.06 49.71 6015 6015 MS2 36/96 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 38 4.60 0.00 0 6 25 3 720.42969 2159.27451 2.69 48.71 5179 5179 MS2 34/80 Linfeng_122411_rIgG_3.raw High TLTDEDEADQGGWLAAFWK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 162 4.52 0.00 0 37 25 3 718.33185 2152.98099 -0.61 48.79 5900 5900 MS2 32/72 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 34 4.13 0.00 0 30 25 2 1080.13684 2159.26641 -1.07 50.12 6069 6069 MS2 23/40 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 40 4.05 0.00 0 5 25 3 720.42743 2159.26773 -0.45 50.16 6073 6073 MS2 37/80 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 40 3.77 0.00 0 17 25 3 720.42773 2159.26865 -0.03 50.05 5986 5986 MS2 31/80 Linfeng_091311_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 379 3.52 0.00 0 56 25 2 875.44312 1749.87895 -1.00 51.55 6246 6246 MS2 23/28 Linfeng_091311_rIgG_2.raw High IVSGcPLPEAcELYYVNR Unambiguous 2 1 IPI00300127.3 C5(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 286 3.39 0.00 0 12 25 3 714.01117 2140.01896 -0.60 36.15 3563 3563 MS2 27/68 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 387 3.23 0.00 0 17 25 2 875.44635 1749.88542 2.69 50.25 5375 5375 MS2 18/28 Linfeng_122411_rIgG_3.raw High EELEALFLPYDLK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 382 3.23 0.00 0 45 25 2 790.41547 1579.82366 -1.15 46.56 5618 5618 MS2 20/24 Linfeng_091311_rIgG_2.raw High QQSAQSQVSTTAENK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 226 3.16 0.00 0 4 25 2 803.88593 1606.76457 -1.37 16.86 1642 1642 MS2 19/28 Linfeng_091311_rIgG_2.raw High EELEALFLPYDLK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 390 3.12 0.00 0 39 25 2 790.41870 1579.83013 2.95 45.42 4759 4759 MS2 19/24 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 426 3.11 0.00 0 39 25 3 583.96667 1749.88547 2.72 50.23 5372 5372 MS2 25/56 Linfeng_122411_rIgG_3.raw High WLNDLLcLDcLNITR Unambiguous 2 1 IPI00300127.3 C7(Carbamidomethyl); C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 331 2.81 0.00 0 41 25 3 640.32153 1918.95005 -0.73 48.86 5909 5909 MS2 25/56 Linfeng_091311_rIgG_2.raw High TLHEVSLQESIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 382 2.73 0.00 0 14 23 3 471.25372 1411.74662 -5.25 26.79 3034 3034 MS2 21/44 Linfeng_091311_rIgG_2.raw High LGQAELVVIDEAAAIPLPLVK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 38 2.71 0.00 0 17 25 3 720.42999 2159.27542 3.11 48.64 5270 5270 MS2 26/80 Linfeng_122411_rIgG_4.raw High IVSGcPLPEAcELYYVNR Unambiguous 2 1 IPI00300127.3 C5(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 206 2.68 0.00 0 8 25 2 1070.50977 2140.01225 -3.74 37.12 4411 4411 MS2 17/34 Linfeng_091311_rIgG_2.raw High ESLQDTQPVGVLVDccK Unambiguous 2 1 IPI00300127.3 C15(Carbamidomethyl); C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 128 2.68 0.00 0 22 25 2 974.45862 1947.90996 -2.65 33.64 3957 3957 MS2 17/32 Linfeng_091311_rIgG_2.raw High SLFVVVGDR Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 360 2.67 0.00 0 37 25 2 496.28348 991.55968 2.54 33.05 3168 3168 MS2 15/16 Linfeng_122411_rIgG_3.raw High QDDPFELFIAATNIR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 427 2.58 0.00 0 0 25 3 583.96539 1749.88163 0.52 51.46 6235 6235 MS2 23/56 Linfeng_091311_rIgG_2.raw High SLFVVVGDR Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 269 2.55 0.00 0 12 25 2 496.28061 991.55394 -3.25 34.56 4077 4077 MS2 14/16 Linfeng_091311_rIgG_2.raw High LDYLGVSYGLTPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 366 2.39 0.00 0 28 25 2 727.38617 1453.76506 -2.43 38.21 4554 4554 MS2 21/24 Linfeng_091311_rIgG_2.raw High QQSAQSQVSTTAENK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 211 2.37 0.00 0 16 25 2 803.88635 1606.76543 -0.84 16.71 1594 1594 MS2 16/28 Linfeng_091311_rIgG_3.raw High LDYLGVSYGLTPR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 386 2.29 0.00 0 21 25 2 727.38867 1453.77007 1.01 37.20 3695 3695 MS2 17/24 Linfeng_122411_rIgG_3.raw High LFNEVQEK Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 330 2.14 0.00 0 18 25 2 503.76236 1006.51744 -2.97 24.15 2667 2667 MS2 11/14 Linfeng_091311_rIgG_2.raw High QSILNSLSR Unambiguous 2 1 IPI00300127.3 CID 1.0000 0.0000 1 1 600 2.08 0.00 0 29 25 2 509.28656 1017.56584 -2.88 30.59 3552 3552 MS2 12/16 Linfeng_091311_rIgG_2.raw High ILIENGVAER Unambiguous 1 1 IPI00300127.3 CID 1.0000 0.0000 1 1 405 2.01 0.00 0 20 25 2 557.31244 1113.61760 -7.82 26.51 2995 2995 MS2 16/18 Linfeng_091311_rIgG_2.raw IPI00216493.1 Isoform 3 of Heterogeneous nuclear ribonucleoprotein H3 21.21 5 4 4 8 23.35 21.21 4 8 0.00 297 31.5 7.31 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 328 4.28 0.00 0 37 25 2 959.98456 1918.96184 -2.09 46.47 5499 5499 MS2 21/32 Linfeng_091311_rIgG_7.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 327 3.52 0.00 0 32 25 2 959.98492 1918.96257 -1.70 46.49 5509 5509 MS2 20/32 Linfeng_091311_rIgG_6.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 349 3.02 0.00 0 11 25 3 640.32605 1918.96360 -1.17 46.42 5494 5494 MS2 29/64 Linfeng_091311_rIgG_7.raw High ATENDIANFFSPLNPIR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 368 2.99 0.00 0 16 25 3 640.32581 1918.96286 -1.55 46.39 5497 5497 MS2 27/64 Linfeng_091311_rIgG_6.raw High GGGGSGGYYGQGGMSGGGWR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 16 2.58 0.00 0 19 25 2 902.87488 1804.74248 -1.79 28.55 3201 3201 MS2 19/38 Linfeng_091311_rIgG_7.raw High STGEAFVQFASK Unambiguous 3 1 IPI00216493.1 CID 1.0000 0.0000 1 1 279 2.48 0.00 0 6 25 2 636.31543 1271.62358 -2.45 31.90 3652 3652 MS2 19/22 Linfeng_091311_rIgG_7.raw High STGEAFVQFASK Unambiguous 3 1 IPI00216493.1 CID 1.0000 0.0000 1 1 272 2.27 0.00 0 13 25 2 636.31549 1271.62370 -2.36 31.92 3665 3665 MS2 18/22 Linfeng_091311_rIgG_6.raw High DGMDNQGGYGSVGR Unambiguous 5 1 IPI00216493.1 CID 1.0000 0.0000 1 1 28 2.21 0.00 0 36 25 2 706.79517 1412.58306 -2.08 23.31 2486 2486 MS2 18/26 Linfeng_091311_rIgG_7.raw IPI00420014.2 Isoform 1 of U5 small nuclear ribonucleoprotein 200 kDa helicase 21.02 5 35 35 77 72.50 8.15 13 24 130.14 20.13 32 41 34.75 2.20 4 12 2136 244.4 6.06 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 5.02 0.00 0 11 25 3 648.66455 1943.97910 2.43 35.39 3492 3492 MS2 40/72 Linfeng_122411_rIgG_2.raw High GLFYFDNSFRPVPLEQTYVGITEK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 326 4.88 0.00 0 4 25 3 940.81635 2820.43448 3.57 44.05 4589 4589 MS2 35/92 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 266 4.79 0.00 0 7 25 3 698.38318 2093.13498 3.42 47.81 5068 5068 MS2 34/72 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 306 4.76 0.00 0 12 25 3 698.38013 2093.12583 -0.95 48.73 5648 5648 MS2 35/72 Linfeng_091311_rIgG_1.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 4.52 0.00 0 21 25 3 592.31897 1774.94236 3.10 44.08 4592 4592 MS2 36/60 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 193 4.35 0.00 0 3 25 2 1047.07129 2093.13530 3.57 47.79 5066 5066 MS2 20/36 Linfeng_122411_rIgG_2.raw High AALETDENLLLcAPTGAGK Unambiguous 4 1 IPI00420014.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 4.33 0.00 0 4 25 2 972.49377 1943.98027 3.03 35.43 3496 3496 MS2 24/36 Linfeng_122411_rIgG_2.raw High LIGLSATLPNYEDVATFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 289 4.32 0.00 0 34 25 3 698.37988 2093.12510 -1.30 48.98 5923 5923 MS2 32/72 Linfeng_091311_rIgG_2.raw High ETYEVLLSFIQAALGDQPR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 367 4.10 0.00 0 6 25 3 717.37854 2150.12107 3.80 55.62 5991 5991 MS2 30/72 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 90 4.04 0.00 0 61 25 2 743.95325 1486.89922 -0.02 50.38 5861 5861 MS2 21/24 Linfeng_091311_rIgG_1.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 377 3.98 0.00 0 7 25 2 887.97498 1774.94267 3.28 44.14 4600 4600 MS2 24/30 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 513 3.92 0.00 0 29 25 3 529.62207 1586.85166 3.62 50.87 5451 5451 MS2 31/56 Linfeng_122411_rIgG_2.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 385 3.80 0.00 0 30 100 2 688.38995 1375.77263 3.40 35.31 3583 3583 MS2 20/24 Linfeng_20120130_CHD1_1.raw High WTELGALDILQMLGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 384 3.73 0.00 0 10 25 2 858.46411 1715.92095 3.46 52.34 5626 5626 MS2 22/28 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 72 3.71 0.00 0 48 25 2 743.95526 1486.90325 2.69 49.46 5276 5276 MS2 20/24 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 89 3.61 0.00 0 44 25 2 743.95313 1486.89897 -0.18 50.69 6139 6139 MS2 20/24 Linfeng_091311_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 308 3.53 0.00 0 28 25 3 672.36780 2015.08884 3.95 47.53 5032 5032 MS2 33/68 Linfeng_122411_rIgG_2.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 421 3.53 0.00 0 14 25 3 592.31567 1774.93247 -2.47 44.82 5150 5150 MS2 32/60 Linfeng_091311_rIgG_1.raw High GLFYFDNSFRPVPLEQTYVGITEK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 325 3.52 0.00 0 16 25 4 705.86475 2820.43715 4.52 44.11 4596 4596 MS2 37/138 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 465 3.48 0.00 0 0 25 2 793.92963 1586.85198 3.82 50.80 5442 5442 MS2 23/28 Linfeng_122411_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 326 3.46 0.00 0 37 25 3 672.36487 2015.08005 -0.41 48.22 5583 5583 MS2 34/68 Linfeng_091311_rIgG_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 306 3.45 0.00 0 8 25 2 688.38843 1375.76958 1.18 29.94 2794 2794 MS2 21/24 Linfeng_122411_rIgG_2.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 378 3.39 0.00 0 36 100 2 688.38971 1375.77214 3.05 35.39 3603 3603 MS2 20/24 Linfeng_20120130_CHD1_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 385 3.32 0.00 0 29 100 2 688.39001 1375.77275 3.49 35.50 3231 3231 MS2 18/24 Linfeng_20120130_CHD1_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 334 3.31 0.00 0 17 25 3 672.36462 2015.07932 -0.77 48.49 5862 5862 MS2 35/68 Linfeng_091311_rIgG_2.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 389 3.30 0.00 0 40 25 2 887.97028 1774.93328 -2.01 44.98 5170 5170 MS2 21/30 Linfeng_091311_rIgG_1.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 73 3.30 0.00 0 26 25 3 496.30579 1486.90281 2.40 49.45 5274 5274 MS2 28/48 Linfeng_122411_rIgG_2.raw High YPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 216 3.29 0.00 0 12 25 3 707.06342 2119.17569 -1.97 46.51 5365 5365 MS2 29/72 Linfeng_091311_rIgG_1.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 385 3.26 0.00 0 29 100 2 688.38977 1375.77226 3.14 35.21 3559 3559 MS2 20/24 Linfeng_20120130_CHD1_1.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 258 3.26 0.00 0 17 25 2 1008.04797 2015.08867 3.87 47.60 5041 5041 MS2 18/34 Linfeng_122411_rIgG_2.raw High TIENKQDAVDYLTWTFLYR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 307 3.26 0.00 1 35 25 3 792.73639 2376.19461 3.16 45.25 4742 4742 MS2 27/72 Linfeng_122411_rIgG_2.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 375 3.23 0.00 0 39 100 2 688.38977 1375.77226 3.14 35.62 3260 3260 MS2 17/24 Linfeng_20120130_CHD1_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 227 3.18 0.00 0 14 25 2 595.34448 1189.68169 2.49 23.27 1923 1923 MS2 19/22 Linfeng_122411_rIgG_2.raw High DEPTGEVLSLVGK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 450 3.17 0.00 0 26 25 2 672.35779 1343.70830 2.19 36.77 3667 3667 MS2 19/24 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 303 3.09 0.00 0 26 100 2 595.34460 1189.68193 2.69 27.48 2108 2108 MS2 17/22 Linfeng_20120130_CHD1_1.raw High QDAVDYLTWTFLYR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 330 3.09 0.00 0 25 25 3 597.63049 1790.87693 1.15 51.16 6197 6197 MS2 19/52 Linfeng_091311_rIgG_2.raw High VVLLTGETSTDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 392 3.09 0.00 0 27 100 2 688.38953 1375.77178 2.78 35.27 3574 3574 MS2 18/24 Linfeng_20120130_CHD1_1.raw High LTAIDILTTcAADIQR Unambiguous 3 1 IPI00420014.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 412 3.07 0.00 0 12 25 3 592.31531 1774.93137 -3.09 45.06 5427 5427 MS2 28/60 Linfeng_091311_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 327 3.03 0.00 0 23 25 2 611.31567 1221.62407 1.47 27.81 2511 2511 MS2 18/20 Linfeng_122411_rIgG_2.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 328 3.02 0.00 0 13 25 2 582.29718 1163.58708 2.27 41.31 4239 4239 MS2 14/16 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 475 2.98 0.00 0 34 25 2 793.92883 1586.85039 2.82 51.88 6039 6039 MS2 23/28 Linfeng_091311_rIgG_1.raw High KADEVLEILK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 373 2.94 0.00 1 8 25 3 386.56467 1157.67945 1.53 31.09 2945 2945 MS2 23/36 Linfeng_122411_rIgG_2.raw High GLIEIISNAAEYENIPIR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 329 2.92 0.00 0 22 25 3 672.36493 2015.08023 -0.32 48.43 5783 5783 MS2 31/68 Linfeng_091311_rIgG_3.raw Medium HLILPEKYPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 30 2.79 0.00 1 26 25 4 738.17834 2949.69155 3.47 43.07 4462 4462 MS2 32/150 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 2.79 0.00 0 59 25 2 793.92700 1586.84673 0.51 52.20 6239 6239 MS2 20/28 Linfeng_091311_rIgG_4.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 272 2.78 0.00 0 66 25 2 595.34521 1189.68315 3.72 22.27 1816 1816 MS2 17/22 Linfeng_122411_rIgG_2.raw High DILcGAADEVLAVLK Unambiguous 3 1 IPI00420014.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 473 2.69 0.00 0 9 25 2 793.92700 1586.84673 0.51 52.05 6309 6309 MS2 22/28 Linfeng_091311_rIgG_2.raw High KPVIVFVPSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 147 2.64 0.00 0 33 25 3 381.24191 1141.71119 1.69 25.95 2261 2261 MS2 17/36 Linfeng_122411_rIgG_2.raw High IVALSSSLSNAK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 267 2.64 0.00 0 10 25 2 595.34076 1189.67424 -3.77 28.02 2893 2893 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLVQEMVGSFGK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 330 2.63 0.00 0 17 25 2 641.33093 1281.65459 2.94 39.79 4047 4047 MS2 19/22 Linfeng_122411_rIgG_2.raw High INVLLQAFISQLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 109 2.62 0.00 0 43 25 3 496.30423 1486.89814 -0.74 50.43 5869 5869 MS2 24/48 Linfeng_091311_rIgG_1.raw High YPPPTELLDLQPLPVSALR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 180 2.57 0.00 0 11 25 3 707.06671 2119.18558 2.70 45.47 4770 4770 MS2 21/72 Linfeng_122411_rIgG_2.raw High FYDDAIVSQK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 248 2.55 0.00 0 33 25 2 593.29419 1185.58110 2.05 24.77 2105 2105 MS2 14/18 Linfeng_122411_rIgG_2.raw High TIcAEFAILR Unambiguous 2 1 IPI00420014.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 347 2.53 0.00 0 11 25 2 597.32178 1193.63628 1.27 36.64 3650 3650 MS2 17/18 Linfeng_122411_rIgG_2.raw High MTQNPNYYNLQGISHR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 250 2.52 0.00 0 23 25 3 645.97723 1935.91715 2.12 25.84 2246 2246 MS2 17/60 Linfeng_122411_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 366 2.49 0.00 0 35 25 2 611.31171 1221.61614 -5.03 29.72 3434 3434 MS2 15/20 Linfeng_091311_rIgG_2.raw Medium GYTLLSEGIDEMVGIIYKPK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 332 2.47 0.00 0 12 25 3 742.73248 2226.18290 4.57 49.81 5320 5320 MS2 22/76 Linfeng_122411_rIgG_2.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 294 2.47 0.00 0 45 100 2 651.30688 1301.60649 4.33 34.42 3388 3388 MS2 16/20 Linfeng_20120130_CHD1_1.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 352 2.46 0.00 0 12 25 2 611.31268 1221.61809 -3.43 29.89 3145 3145 MS2 16/20 Linfeng_091311_rIgG_1.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 263 2.46 0.00 0 47 100 2 651.30585 1301.60442 2.73 34.60 3058 3058 MS2 15/20 Linfeng_20120130_CHD1_2.raw High FYDDAIVSQK Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 260 2.41 0.00 0 16 25 2 593.29114 1185.57500 -3.10 28.42 2947 2947 MS2 15/18 Linfeng_091311_rIgG_1.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 305 2.40 0.00 0 6 25 2 582.29419 1163.58110 -2.87 42.25 4817 4817 MS2 14/16 Linfeng_091311_rIgG_1.raw High TNLLLQAHLSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 182 2.40 0.00 0 28 25 2 633.37097 1265.73467 1.72 28.29 2575 2575 MS2 15/20 Linfeng_122411_rIgG_2.raw High GWAQLTDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 594 2.34 0.00 0 17 25 2 459.73871 918.47014 2.33 24.39 2058 2058 MS2 13/14 Linfeng_122411_rIgG_2.raw High DTLGLFLR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 370 2.34 0.00 0 17 25 2 467.77252 934.53777 2.22 39.37 3995 3995 MS2 13/14 Linfeng_122411_rIgG_2.raw High TLVEDLFADK Unambiguous 1 1 IPI00420014.2 CID 1.0000 0.0000 1 1 415 2.32 0.00 0 10 25 2 575.80469 1150.60210 2.61 39.26 3982 3982 MS2 15/18 Linfeng_122411_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 500 2.30 0.00 0 38 100 2 611.31738 1221.62749 4.26 31.45 2490 2490 MS2 14/20 Linfeng_20120130_CHD1_2.raw High KPVIVFVPSR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 130 2.25 0.00 0 44 25 2 571.35852 1141.70976 0.45 26.30 2309 2309 MS2 14/18 Linfeng_122411_rIgG_2.raw High EEGWWVVIGDAK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 336 2.24 0.00 0 10 25 2 694.84711 1388.68694 1.70 41.77 4298 4298 MS2 18/22 Linfeng_122411_rIgG_2.raw High TGNFQVTELGR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 530 2.23 0.00 0 40 100 2 611.31732 1221.62737 4.16 31.37 2479 2479 MS2 15/20 Linfeng_20120130_CHD1_2.raw High SPTLYGISHDDLK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 370 2.16 0.00 0 8 25 2 723.36908 1445.73088 2.59 27.72 2498 2498 MS2 16/24 Linfeng_122411_rIgG_2.raw High DIDAFWLQR Unambiguous 3 1 IPI00420014.2 CID 1.0000 0.0000 1 1 328 2.15 0.00 0 48 25 2 582.29449 1163.58171 -2.35 42.29 5012 5012 MS2 14/16 Linfeng_091311_rIgG_3.raw High YAQAGFEGFK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 224 2.12 0.00 0 29 25 2 559.27026 1117.53325 1.72 27.37 2452 2452 MS2 15/18 Linfeng_122411_rIgG_2.raw High NSAFESLYQDK Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 252 2.11 0.00 0 47 100 2 651.30634 1301.60539 3.48 34.74 3083 3083 MS2 15/20 Linfeng_20120130_CHD1_2.raw High TLVEDLFADK Unambiguous 1 1 IPI00420014.2 CID 1.0000 0.0000 1 1 356 2.09 0.00 0 9 25 2 575.80157 1150.59587 -2.80 40.25 4550 4550 MS2 14/18 Linfeng_091311_rIgG_1.raw High SNSLISIK Unambiguous 4 1 IPI00420014.2 CID 1.0000 0.0000 1 1 417 2.08 0.00 0 48 25 2 431.25400 861.50072 -3.86 27.40 2808 2808 MS2 12/14 Linfeng_091311_rIgG_1.raw High AIFEIVLNR Unambiguous 2 1 IPI00420014.2 CID 1.0000 0.0000 1 1 260 2.04 0.00 0 7 25 2 537.81995 1074.63262 1.82 38.15 3842 3842 MS2 15/16 Linfeng_122411_rIgG_2.raw IPI00011913.1 Heterogeneous nuclear ribonucleoprotein A0 20.98 1 4 4 4 12.38 20.98 4 4 305 30.8 9.29 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LFIGGLNVQTSESGLR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 336 4.01 0.00 0 5 25 2 845.95776 1690.90825 -2.42 38.43 4488 4488 MS2 26/30 Linfeng_091311_rIgG_7.raw High GDVAEGDLIEHFSQFGTVEK Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 244 3.47 0.00 0 9 25 3 726.68231 2178.03238 -1.23 39.82 4664 4664 MS2 35/76 Linfeng_091311_rIgG_7.raw High SGGGGGGGGSSWGGR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 58 2.80 0.00 0 15 25 2 596.75751 1192.50774 -1.12 17.06 1618 1618 MS2 22/28 Linfeng_091311_rIgG_7.raw High EDIYSGGGGGGSR Unambiguous 1 1 IPI00011913.1 CID 1.0000 0.0000 1 1 66 2.10 0.00 0 36 25 2 606.26733 1211.52739 -1.15 19.29 1930 1930 MS2 21/24 Linfeng_091311_rIgG_7.raw IPI00444262.3 "cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin" 20.90 4 12 12 33 35.91 16.58 8 12 39.76 19.57 8 12 22.34 4.64 3 9 603 65.9 4.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 367 5.37 0.00 0 9 25 3 771.39258 2312.16318 3.17 46.32 4875 4875 MS2 34/80 Linfeng_122411_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 348 5.30 0.00 0 4 25 3 834.42999 2501.27542 3.84 47.88 5075 5075 MS2 36/84 Linfeng_122411_rIgG_3.raw High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 347 5.28 0.00 0 31 25 3 771.39032 2312.15641 0.24 47.40 5652 5652 MS2 34/80 Linfeng_091311_rIgG_3.raw High VEGTEPTTAFNLFVGNLNFNK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 344 4.44 0.00 0 14 25 3 771.39178 2312.16080 2.14 46.15 4963 4963 MS2 30/80 Linfeng_122411_rIgG_4.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 352 4.43 0.00 0 13 25 3 834.42639 2501.26462 -0.48 48.95 5848 5848 MS2 36/84 Linfeng_091311_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 351 4.25 0.00 0 22 25 3 834.42731 2501.26737 0.61 49.11 5867 5867 MS2 34/84 Linfeng_091311_rIgG_4.raw High VTQDELKEVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 337 4.05 0.00 1 3 25 3 664.67072 1991.99759 2.74 41.29 4223 4223 MS2 33/64 Linfeng_122411_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 305 3.61 0.00 0 39 25 2 1251.13721 2501.26714 0.52 49.05 5860 5860 MS2 17/42 Linfeng_091311_rIgG_3.raw High TLVLSNLSYSATEETLQEVFEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 338 3.43 0.00 0 12 25 3 834.43054 2501.27707 4.49 47.77 5167 5167 MS2 32/84 Linfeng_122411_rIgG_4.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 522 3.14 0.00 0 16 100 2 589.79022 1178.57317 3.65 31.22 2320 2320 MS2 16/18 Linfeng_20120130_CHD1_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 473 2.94 0.00 0 38 100 2 589.79095 1178.57463 4.90 31.03 2292 2292 MS2 15/18 Linfeng_20120130_CHD1_3.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 481 2.82 0.00 0 12 25 2 500.77618 1000.54509 2.85 25.69 2201 2201 MS2 15/16 Linfeng_122411_rIgG_3.raw High AIRLELQGPR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 141 2.81 0.00 1 38 25 3 384.90097 1152.68836 3.06 23.36 1904 1904 MS2 20/36 Linfeng_122411_rIgG_3.raw High GLSEDTTEETLKESFDGSVR Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 219 2.77 0.00 1 3 25 3 734.01514 2200.03086 2.53 33.31 3201 3201 MS2 35/76 Linfeng_122411_rIgG_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 505 2.77 0.00 0 22 100 2 589.79028 1178.57329 3.76 31.32 2335 2335 MS2 16/18 Linfeng_20120130_CHD1_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 466 2.65 0.00 0 23 100 2 589.79108 1178.57488 5.10 31.17 2313 2313 MS2 17/18 Linfeng_20120130_CHD1_3.raw High GLSEDTTEETLK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 233 2.57 0.00 0 3 25 2 661.81787 1322.62847 -2.85 24.38 2665 2665 MS2 16/22 Linfeng_091311_rIgG_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 480 2.52 0.00 0 22 25 2 580.79419 1160.58110 -1.98 29.90 3421 3421 MS2 14/18 Linfeng_091311_rIgG_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 493 2.46 0.00 0 54 100 2 589.78986 1178.57244 3.03 30.87 2268 2268 MS2 14/18 Linfeng_20120130_CHD1_3.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 486 2.42 0.00 0 25 25 2 500.77545 1000.54363 1.38 26.30 2425 2425 MS2 15/16 Linfeng_122411_rIgG_4.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 482 2.35 0.00 0 45 25 2 580.79651 1160.58574 2.02 28.15 2527 2527 MS2 13/18 Linfeng_122411_rIgG_3.raw High VTQDELK Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 714 2.29 0.00 0 62 25 2 416.72299 832.43871 -2.89 16.17 1518 1518 MS2 9/12 Linfeng_091311_rIgG_3.raw High NDLAVVDVR Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 369 2.26 0.00 0 14 25 2 500.77338 1000.53948 -2.76 28.55 3238 3238 MS2 15/16 Linfeng_091311_rIgG_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 290 2.25 0.00 0 21 25 2 589.78668 1178.56609 -2.35 29.82 3410 3410 MS2 15/18 Linfeng_091311_rIgG_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 595 2.17 0.00 0 45 100 2 580.79791 1160.58855 4.44 31.49 2362 2362 MS2 13/18 Linfeng_20120130_CHD1_3.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 483 2.16 0.00 0 30 25 2 580.79419 1160.58110 -1.98 30.04 3433 3433 MS2 14/18 Linfeng_091311_rIgG_4.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 257 2.15 0.00 0 13 25 2 469.25189 937.49651 -2.63 31.66 3655 3655 MS2 13/16 Linfeng_091311_rIgG_3.raw High VTQDELK Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 591 2.13 0.00 0 44 25 2 416.72357 832.43987 -1.49 16.40 1539 1539 MS2 9/12 Linfeng_091311_rIgG_4.raw High SISLYYTGEK Unambiguous 4 1 IPI00444262.3 CID 1.0000 0.0000 1 1 528 2.10 0.00 0 7 100 2 580.79724 1160.58721 3.28 31.96 2435 2435 MS2 12/18 Linfeng_20120130_CHD1_3.raw High ALELTGLK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 616 2.08 0.00 0 30 100 2 422.76218 844.51708 3.77 31.98 2441 2441 MS2 11/14 Linfeng_20120130_CHD1_3.raw High EVFEDAAEIR Unambiguous 3 1 IPI00444262.3 CID 1.0000 0.0000 1 1 484 2.03 0.00 0 63 100 2 589.78973 1178.57219 2.83 31.01 2978 2978 MS2 13/18 Linfeng_20120130_CHD1_5.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 259 2.01 0.00 0 22 25 2 469.25369 937.50011 1.21 30.18 2939 2939 MS2 12/16 Linfeng_122411_rIgG_4.raw High TGISDVFAK Unambiguous 2 1 IPI00444262.3 CID 1.0000 0.0000 1 1 253 2.00 0.00 0 19 25 2 469.25391 937.50054 1.67 30.00 2772 2772 MS2 13/16 Linfeng_122411_rIgG_3.raw IPI00456887.2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 20.62 2 15 15 25 28.89 15.53 11 11 26.36 8.97 7 8 18.03 8.84 5 6 747 85.1 4.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 179 5.02 0.00 0 3 25 2 914.42737 1827.84746 1.72 32.49 3096 3096 MS2 23/28 Linfeng_122411_rIgG_3.raw High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 186 3.95 0.00 0 12 25 3 609.95374 1827.84665 1.28 32.48 3095 3095 MS2 31/56 Linfeng_122411_rIgG_3.raw High NFILDQcNVYNSGQR Unambiguous 2 1 IPI00456887.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 162 3.94 0.00 0 10 25 2 914.42377 1827.84026 -2.22 33.55 3901 3901 MS2 24/28 Linfeng_091311_rIgG_3.raw High SRDLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 480 3.94 0.00 1 27 25 3 578.30634 1732.90445 1.93 27.05 2382 2382 MS2 29/56 Linfeng_122411_rIgG_3.raw High DLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 626 3.69 0.00 0 15 100 2 745.39044 1489.77361 3.79 37.44 3489 3489 MS2 19/24 Linfeng_20120130_CHD1_3.raw High YNVLGAETVLNQmR Unambiguous 2 1 IPI00456887.2 M13(Oxidation) CID 1.0000 0.0000 1 1 517 3.63 0.00 0 27 100 2 812.41479 1623.82231 3.90 40.55 4075 4075 MS2 18/26 Linfeng_20120130_CHD1_3.raw High KVVVVVPNEEDWKK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 277 3.55 0.00 2 17 25 3 556.98065 1668.92740 -2.77 27.45 3088 3088 MS2 27/52 Linfeng_091311_rIgG_3.raw High DLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 431 3.51 0.00 0 4 25 2 745.38910 1489.77092 1.98 32.09 3043 3043 MS2 21/24 Linfeng_122411_rIgG_3.raw High VTQNLPMKEGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 358 3.35 0.00 1 17 25 3 692.36023 2075.06614 1.76 30.51 2837 2837 MS2 29/68 Linfeng_122411_rIgG_3.raw High VVVVVPNEEDWK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 397 3.21 0.00 0 11 100 2 706.87744 1412.74761 3.91 39.72 3938 3938 MS2 14/22 Linfeng_20120130_CHD1_3.raw High DLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 410 3.12 0.00 0 10 25 2 745.38593 1489.76457 -2.28 33.17 3852 3852 MS2 21/24 Linfeng_091311_rIgG_3.raw High EVEGDDVPESImLEmK Unambiguous 2 1 IPI00456887.2 M12(Oxidation); M15(Oxidation) CID 1.0000 0.0000 1 1 164 2.92 0.00 0 17 100 2 926.91577 1852.82427 2.74 33.17 2653 2653 MS2 16/30 Linfeng_20120130_CHD1_3.raw High NcVVELNFGQK Unambiguous 2 1 IPI00456887.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 2.71 0.00 0 7 25 2 654.32281 1307.63835 -2.26 32.84 3811 3811 MS2 17/20 Linfeng_091311_rIgG_3.raw High SGDETPGSEVPGDK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 72 2.51 0.00 0 0 25 2 687.80389 1374.60051 -1.10 19.50 1988 1988 MS2 19/26 Linfeng_091311_rIgG_3.raw Medium SRDLLVQQASQcLSK Unambiguous 2 1 IPI00456887.2 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 475 2.48 0.00 1 39 25 3 578.30420 1732.89804 -1.77 28.74 3265 3265 MS2 24/56 Linfeng_091311_rIgG_3.raw High NcVVELNFGQK Unambiguous 2 1 IPI00456887.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 557 2.33 0.00 0 17 100 2 654.32666 1307.64604 3.62 38.03 3612 3612 MS2 16/20 Linfeng_20120130_CHD1_3.raw High NcVVELNFGQK Unambiguous 2 1 IPI00456887.2 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 557 2.26 0.00 0 24 100 2 654.32678 1307.64629 3.81 37.86 3577 3577 MS2 15/20 Linfeng_20120130_CHD1_3.raw High FPTLWSGAR Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 442 2.23 0.00 0 14 25 2 517.77502 1034.54277 0.90 34.84 3395 3395 MS2 15/16 Linfeng_122411_rIgG_3.raw High YGGQPLFSEK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 283 2.18 0.00 0 37 25 2 563.28381 1125.56035 2.50 24.34 2023 2023 MS2 15/18 Linfeng_122411_rIgG_3.raw High EGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.17 0.00 0 20 25 2 582.29150 1163.57573 2.73 26.46 2303 2303 MS2 14/18 Linfeng_122411_rIgG_3.raw High FPTLWSGAR Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 476 2.14 0.00 0 3 25 2 517.77307 1034.53887 -2.88 35.99 4217 4217 MS2 15/16 Linfeng_091311_rIgG_3.raw High REEDEPEER Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 50 2.13 0.00 1 26 25 2 594.75977 1188.51225 -0.46 2.70 240 240 MS2 15/16 Linfeng_091311_rIgG_3.raw High EGcTEVSLLR Unambiguous 2 1 IPI00456887.2 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 2.12 0.00 0 10 25 2 582.28888 1163.57048 -1.78 28.92 3289 3289 MS2 15/18 Linfeng_091311_rIgG_3.raw High YGGQPLFSEK Unambiguous 2 1 IPI00456887.2 CID 1.0000 0.0000 1 1 273 2.11 0.00 0 28 25 2 563.28070 1125.55412 -3.04 27.90 3149 3149 MS2 15/18 Linfeng_091311_rIgG_3.raw High NYYGYQGYR Unambiguous 1 1 IPI00456887.2 CID 1.0000 0.0000 1 1 59 2.10 0.00 0 10 25 2 592.25854 1183.50981 -5.81 25.54 2826 2826 MS2 14/16 Linfeng_091311_rIgG_3.raw IPI00026089.4 Splicing factor 3B subunit 1 20.40 2 19 19 34 46.94 12.42 12 15 24.81 9.51 9 9 30.54 5.67 5 10 1304 145.7 7.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 254 4.70 0.00 0 7 25 3 678.70953 2034.11405 -0.89 49.31 5965 5965 MS2 34/64 Linfeng_091311_rIgG_2.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 196 4.48 0.00 0 21 25 2 1017.56079 2034.11431 -0.76 49.31 5964 5964 MS2 25/32 Linfeng_091311_rIgG_2.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 186 4.13 0.00 0 10 25 2 1017.56482 2034.12236 3.20 48.05 5096 5096 MS2 24/32 Linfeng_122411_rIgG_3.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 562 4.12 0.00 0 18 100 2 901.46069 1801.91411 4.14 38.91 3962 3962 MS2 21/30 Linfeng_20120130_CHD1_2.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 542 4.10 0.00 0 22 100 2 901.45978 1801.91228 3.12 38.67 3735 3735 MS2 18/30 Linfeng_20120130_CHD1_3.raw High LLVDVDESTLSPEEQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 565 3.98 0.00 0 17 100 2 901.46124 1801.91521 4.75 38.46 3873 3873 MS2 20/30 Linfeng_20120130_CHD1_2.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 238 3.83 0.00 0 17 25 3 678.71033 2034.11643 0.28 49.38 5901 5901 MS2 32/64 Linfeng_091311_rIgG_3.raw High ILVVIEPLLIDEDYYAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 198 3.77 0.00 0 20 25 2 1017.56104 2034.11479 -0.52 49.46 5912 5912 MS2 21/32 Linfeng_091311_rIgG_3.raw High NRPLSDEELDAmFPEGYK Unambiguous 1 1 IPI00026089.4 M12(Oxidation) CID 1.0000 0.0000 1 1 307 3.69 0.00 1 12 100 3 709.66394 2126.97727 3.41 37.65 3704 3704 MS2 30/68 Linfeng_20120130_CHD1_2.raw High SLVEIIEHGLVDEQQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 385 3.39 0.00 0 15 25 3 612.99646 1836.97483 2.49 42.48 4378 4378 MS2 27/60 Linfeng_122411_rIgG_3.raw High SLVEIIEHGLVDEQQK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 370 3.37 0.00 0 17 25 3 612.99329 1836.96531 -2.69 43.20 5192 5192 MS2 28/60 Linfeng_091311_rIgG_2.raw High AIGPHDVLATLLNNLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 159 3.09 0.00 0 0 25 3 563.66034 1688.96646 -1.77 48.35 5845 5845 MS2 27/60 Linfeng_091311_rIgG_2.raw High AFAVVASALGIPSLLPFLK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 34 3.02 0.00 0 8 25 2 957.58069 1914.15410 4.03 53.87 5811 5811 MS2 16/36 Linfeng_122411_rIgG_3.raw High IADREDEYKK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 324 3.00 0.00 2 25 25 3 422.88168 1266.63050 -1.59 13.96 1233 1233 MS2 20/36 Linfeng_091311_rIgG_2.raw High QLVDTTVELANK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 491 2.82 0.00 0 13 25 2 665.86566 1330.72405 2.04 28.17 2529 2529 MS2 19/22 Linfeng_122411_rIgG_3.raw High VGAAEIISR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 616 2.76 0.00 0 37 25 2 458.26495 915.52263 -3.53 24.98 2784 2784 MS2 15/16 Linfeng_091311_rIgG_2.raw High GDTPGHATPGHGGATSSAR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 153 2.75 0.00 0 5 25 3 578.60229 1733.79233 -1.59 12.68 1053 1053 MS2 27/72 Linfeng_091311_rIgG_2.raw High IWDPTPSHTPAGAATPGR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 556 2.66 0.00 0 29 100 3 611.31018 1831.91599 4.00 27.13 1857 1857 MS2 27/68 Linfeng_20120130_CHD1_2.raw High VQENcIDLVGR Unambiguous 2 1 IPI00026089.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 334 2.63 0.00 0 27 25 2 651.82477 1302.64226 -3.74 28.55 3275 3275 MS2 17/20 Linfeng_091311_rIgG_2.raw High THEDIEAQIR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 262 2.62 0.00 0 33 25 3 404.53748 1211.59787 -3.03 21.81 2336 2336 MS2 19/36 Linfeng_091311_rIgG_2.raw High VQENcIDLVGR Unambiguous 2 1 IPI00026089.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 505 2.55 0.00 0 74 100 2 651.82837 1302.64946 1.79 27.21 1867 1867 MS2 16/20 Linfeng_20120130_CHD1_2.raw High QLVDTTVELANK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 435 2.53 0.00 0 28 25 2 665.86243 1330.71758 -2.82 29.98 3470 3470 MS2 19/22 Linfeng_091311_rIgG_2.raw High GGDSIGETPTPGASK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 182 2.51 0.00 0 13 25 2 687.32928 1373.65129 -2.26 20.78 2193 2193 MS2 19/28 Linfeng_091311_rIgG_2.raw Medium DTPGHGSGWAETPR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 122 2.49 0.00 0 27 25 3 489.89023 1467.65613 -3.45 22.26 2400 2400 MS2 22/52 Linfeng_091311_rIgG_2.raw Medium IWDPTPSHTPAGAATPGR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 571 2.48 0.00 0 20 100 3 611.31006 1831.91562 3.80 27.23 1871 1871 MS2 28/68 Linfeng_20120130_CHD1_2.raw Medium IWDPTPSHTPAGAATPGR Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 558 2.47 0.00 0 28 100 3 611.30945 1831.91379 2.80 27.05 1844 1844 MS2 26/68 Linfeng_20120130_CHD1_2.raw Medium AIGPHDVLATLLNNLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 140 2.46 0.00 0 22 25 3 563.66290 1688.97416 2.78 47.42 5016 5016 MS2 28/60 Linfeng_122411_rIgG_3.raw High VQENcIDLVGR Unambiguous 2 1 IPI00026089.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.42 0.00 0 29 25 2 651.82874 1302.65019 2.36 25.72 2204 2204 MS2 15/20 Linfeng_122411_rIgG_3.raw High VVNGAAASQPPSK Unambiguous 1 1 IPI00026089.4 CID 1.0000 0.0000 1 1 324 2.40 0.00 0 12 25 2 613.32922 1225.65117 -1.97 15.87 1502 1502 MS2 17/24 Linfeng_091311_rIgG_2.raw High IcFELLELLK Unambiguous 2 1 IPI00026089.4 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 332 2.32 0.00 0 12 25 2 639.36426 1277.72124 2.98 47.69 5050 5050 MS2 16/18 Linfeng_122411_rIgG_3.raw High ATVNTFGYIAK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 450 2.27 0.00 0 34 100 2 592.82178 1184.63628 4.42 33.06 2778 2778 MS2 11/20 Linfeng_20120130_CHD1_2.raw High ATVNTFGYIAK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 460 2.21 0.00 0 31 100 2 592.82172 1184.63616 4.32 32.97 2758 2758 MS2 11/20 Linfeng_20120130_CHD1_2.raw High VPELNVQNGVLK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 226 2.19 0.00 0 49 25 2 655.37817 1309.74907 1.21 30.44 2828 2828 MS2 17/22 Linfeng_122411_rIgG_3.raw High ATVNTFGYIAK Unambiguous 2 1 IPI00026089.4 CID 1.0000 0.0000 1 1 337 2.06 0.00 0 10 25 2 592.82050 1184.63371 2.26 28.42 2562 2562 MS2 18/20 Linfeng_122411_rIgG_3.raw IPI00328985.1 Isoform 1 of THO complex subunit 6 homolog 20.23 3 5 5 5 13.74 20.23 5 5 0.00 341 37.5 7.43 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TSLEVPEINALLLVPK Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 78 3.23 0.00 0 9 25 3 579.34442 1736.01871 -1.03 47.22 5600 5600 MS2 27/60 Linfeng_091311_rIgG_6.raw High AVPLAVPLGQTEVFQALQR Unambiguous 2 1 IPI00328985.1 CID 1.0000 0.0000 1 1 167 3.08 0.00 0 9 25 3 679.71960 2037.14426 -2.45 44.54 5264 5264 MS2 33/72 Linfeng_091311_rIgG_6.raw High VDVFTNLGYR Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 337 2.90 0.00 0 23 25 2 592.30719 1183.60710 -2.99 36.05 4199 4199 MS2 17/18 Linfeng_091311_rIgG_6.raw High SPEVLSGGEDGAVR Unambiguous 3 1 IPI00328985.1 CID 1.0000 0.0000 1 1 215 2.52 0.00 0 5 25 2 686.83734 1372.66741 -2.17 24.93 2733 2733 MS2 22/26 Linfeng_091311_rIgG_6.raw High VLTAAGNScR Unambiguous 2 1 IPI00328985.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 470 2.01 0.00 0 44 25 2 524.76288 1048.51848 -1.88 16.74 1608 1608 MS2 15/18 Linfeng_091311_rIgG_6.raw IPI00658000.3 Isoform 1 of Insulin-like growth factor 2 mRNA-binding protein 3 20.21 2 7 9 14 10.41 9.15 4 4 17.77 13.13 5 6 10.85 5.35 3 4 579 63.7 8.87 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 1 48 3.54 0.00 0 9 25 3 485.97083 1455.89792 3.08 45.22 4845 4845 MS2 29/52 Linfeng_122411_rIgG_4.raw High SITILSTPEGTSAAcK Unambiguous 2 1 IPI00658000.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 3.17 0.00 0 7 25 2 818.41870 1635.83013 2.59 28.87 2768 2768 MS2 21/30 Linfeng_122411_rIgG_4.raw High mVIITGPPEAQFK Unambiguous 4 2 IPI00008557.6;IPI00658000.3 M1(Oxidation) CID 1.0000 0.0000 1 1 622 3.06 0.00 0 21 100 2 723.88995 1446.77263 4.45 36.18 3940 3940 MS2 17/24 Linfeng_20120130_CHD1_4.raw High SITILSTPEGTSAAcK Unambiguous 2 1 IPI00658000.3 C15(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.01 0.00 0 7 25 2 818.41522 1635.82317 -1.66 30.56 3502 3502 MS2 20/30 Linfeng_091311_rIgG_4.raw High ITISPLQELTLYNPER Unambiguous 2 1 IPI00658000.3 CID 1.0000 0.0000 1 1 308 3.00 0.00 0 14 25 2 944.01782 1887.02837 3.23 42.86 4547 4547 MS2 14/30 Linfeng_122411_rIgG_4.raw High mVIITGPPEAQFK Unambiguous 4 2 IPI00008557.6;IPI00658000.3 M1(Oxidation) CID 1.0000 0.0000 1 1 630 2.99 0.00 0 26 100 2 723.88959 1446.77190 3.94 36.26 3955 3955 MS2 16/24 Linfeng_20120130_CHD1_4.raw High TVNELQNLSSAEVVVPR Unambiguous 2 1 IPI00658000.3 CID 1.0000 0.0000 1 1 337 2.98 0.00 0 26 25 3 619.00391 1854.99717 2.76 35.09 3571 3571 MS2 28/64 Linfeng_122411_rIgG_4.raw High ITISPLQELTLYNPER Unambiguous 2 1 IPI00658000.3 CID 1.0000 0.0000 1 1 318 2.92 0.00 0 9 25 3 629.68182 1887.03092 4.58 42.84 4545 4545 MS2 26/60 Linfeng_122411_rIgG_4.raw High DQTPDENDQVVVK Unambiguous 2 1 IPI00658000.3 CID 1.0000 0.0000 1 1 207 2.80 0.00 0 12 25 2 743.85352 1486.69975 -1.55 22.72 2427 2427 MS2 18/24 Linfeng_091311_rIgG_4.raw High ALQSGPPQSR Unambiguous 2 1 IPI00658000.3 CID 1.0000 0.0000 1 1 331 2.56 0.00 0 35 25 2 520.77686 1040.54643 -1.87 16.33 1530 1530 MS2 13/18 Linfeng_091311_rIgG_4.raw High IPVSGPFLVK Unambiguous 1 1 IPI00658000.3 CID 1.0000 0.0000 1 1 315 2.45 0.00 0 16 100 2 528.82843 1056.64958 4.10 41.85 5041 5041 MS2 12/18 Linfeng_20120130_CHD1_4.raw High FTEEIPLK Unambiguous 1 1 IPI00658000.3 CID 1.0000 0.0000 1 1 630 2.36 0.00 0 13 100 2 488.77292 976.53856 3.62 31.96 3027 3027 MS2 13/14 Linfeng_20120130_CHD1_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw High LLVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 1 45 2.04 0.00 0 53 25 2 728.45081 1455.89433 0.61 46.38 5521 5521 MS2 19/26 Linfeng_091311_rIgG_4.raw IPI00181728.1 Ribosome biogenesis protein BRX1 homolog 20.11 1 6 6 8 20.81 20.11 6 8 353 41.4 9.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SQPFVDHVFTFTILDNR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 365 3.28 0.00 0 4 25 3 679.34491 2036.02018 -1.72 43.42 5125 5125 MS2 29/64 Linfeng_091311_rIgG_6.raw Medium GSRPLLSFDPAFDELPHYALLK Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 287 2.92 0.00 0 11 25 4 622.33124 2486.30312 -1.93 42.91 5061 5061 MS2 34/126 Linfeng_091311_rIgG_6.raw High HATAEEVEEEERDR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 91 2.86 0.00 1 6 25 3 567.25397 1699.74735 -2.67 18.88 1905 1905 MS2 23/52 Linfeng_091311_rIgG_6.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 302 2.75 0.00 0 27 25 2 658.87964 1316.75200 -4.04 45.05 5328 5328 MS2 16/20 Linfeng_091311_rIgG_6.raw High HATAEEVEEEER Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 61 2.64 0.00 0 0 25 2 714.81488 1428.62248 -0.93 18.16 1772 1772 MS2 18/22 Linfeng_091311_rIgG_7.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 282 2.18 0.00 0 28 25 2 658.88104 1316.75481 -1.91 45.29 5453 5453 MS2 15/20 Linfeng_091311_rIgG_8.raw High FVLNLIK Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 44 2.10 0.00 0 4 25 2 423.77481 846.54234 -2.89 37.61 4399 4399 MS2 11/12 Linfeng_091311_rIgG_6.raw High ELLIQIFSTPR Unambiguous 1 1 IPI00181728.1 CID 1.0000 0.0000 1 1 271 2.08 0.00 0 37 25 2 658.88159 1316.75591 -1.07 45.35 5359 5359 MS2 15/20 Linfeng_091311_rIgG_7.raw IPI00000733.4 U3 small nucleolar RNA-associated protein 18 homolog 20.07 1 8 8 9 11.93 11.17 5 5 13.35 10.65 4 4 573 64.0 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FVDEGSLYGLSIATSR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 357 4.09 0.00 0 22 25 2 857.93707 1714.86687 1.26 37.67 3896 3896 MS2 24/30 Linfeng_122411_rIgG_4.raw High TGNFISTSTSLPR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 374 3.53 0.00 0 2 25 2 690.86060 1380.71391 1.52 29.13 2802 2802 MS2 18/24 Linfeng_122411_rIgG_4.raw High AGAGPGGPPQKPAPSSQR Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 397 3.23 0.00 0 24 25 3 553.95581 1659.85288 -2.03 15.58 1422 1422 MS2 25/68 Linfeng_091311_rIgG_4.raw High KPPARPSAAAAAIAVAAAEEER Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 293 3.03 0.00 0 37 25 4 537.54547 2147.16005 1.48 30.87 3029 3029 MS2 37/126 Linfeng_122411_rIgG_4.raw High SGYFALGNEK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 221 2.69 0.00 0 24 25 2 543.26825 1085.52922 2.75 27.67 2606 2606 MS2 15/18 Linfeng_122411_rIgG_4.raw High LVHLPScTVFSNFPVIK Unambiguous 1 1 IPI00000733.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 357 2.51 0.00 0 19 25 3 653.35583 1958.05295 -2.01 40.45 4775 4775 MS2 24/64 Linfeng_091311_rIgG_4.raw High VAASTFSSDSK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 155 2.14 0.00 0 45 25 2 550.26556 1099.52385 -2.54 19.01 1906 1906 MS2 16/20 Linfeng_091311_rIgG_4.raw High SGYFALGNEK Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 208 2.06 0.00 0 23 25 2 543.26556 1085.52385 -2.20 29.64 3379 3379 MS2 15/18 Linfeng_091311_rIgG_4.raw High IQSIYLER Unambiguous 1 1 IPI00000733.4 CID 1.0000 0.0000 1 1 314 2.00 0.00 0 23 25 2 511.28653 1021.56578 -1.88 28.40 3212 3212 MS2 11/14 Linfeng_091311_rIgG_4.raw IPI00966829.1 69 kDa protein 20.03 11 10 10 45 117.40 18.87 9 38 22.00 5.30 3 7 0.00 604 69.2 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 335 4.48 0.00 0 22 25 3 682.36786 2045.08902 -3.15 40.38 4892 4892 MS2 35/64 Linfeng_091311_rIgG_10.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 203 4.24 0.00 1 5 10 3 547.31586 1639.93302 -2.93 29.30 3377 3377 MS2 32/56 Linfeng_091311_rIgG_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 174 4.24 0.00 1 8 25 3 547.31873 1639.94162 2.32 27.48 2467 2467 MS2 29/56 Linfeng_122411_rIgG_2.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 234 4.23 0.00 1 8 25 3 489.95135 1467.83951 -2.45 33.68 3962 3962 MS2 33/44 Linfeng_091311_rIgG_2.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 163 4.22 0.00 1 14 4 3 547.31549 1639.93192 -3.60 29.44 3086 3086 MS2 30/56 Linfeng_091311_rIgG_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 173 4.08 0.00 1 13 25 3 547.31891 1639.94217 2.65 27.68 2608 2608 MS2 32/56 Linfeng_122411_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 163 4.00 0.00 1 12 25 3 547.31543 1639.93174 -3.71 29.51 3332 3332 MS2 29/56 Linfeng_091311_rIgG_7.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 195 4.00 0.00 1 14 25 3 547.31635 1639.93448 -2.04 29.13 3317 3317 MS2 26/56 Linfeng_091311_rIgG_3.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 230 3.85 0.00 1 5 25 3 489.95157 1467.84015 -2.02 33.81 3927 3927 MS2 33/44 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 198 3.80 0.00 1 16 24 3 547.31622 1639.93412 -2.26 29.24 3325 3325 MS2 30/56 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 203 3.77 0.00 1 19 25 3 547.31586 1639.93302 -2.93 29.50 3346 3346 MS2 28/56 Linfeng_091311_rIgG_6.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 175 3.55 0.00 1 32 25 3 547.31854 1639.94107 1.98 27.55 2448 2448 MS2 28/56 Linfeng_122411_rIgG_3.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 232 3.48 0.00 1 14 25 3 489.95154 1467.84006 -2.08 34.09 3903 3903 MS2 29/44 Linfeng_091311_rIgG_5.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 324 3.45 0.00 0 34 25 3 682.36859 2045.09122 -2.08 40.60 4772 4772 MS2 28/64 Linfeng_091311_rIgG_6.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 201 3.37 0.00 1 38 25 3 547.31573 1639.93265 -3.15 29.34 3442 3442 MS2 27/56 Linfeng_091311_rIgG_10.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 205 3.32 0.00 1 21 25 3 489.95090 1467.83814 -3.39 34.14 3942 3942 MS2 30/44 Linfeng_091311_rIgG_7.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 342 3.32 0.00 0 25 25 3 682.36761 2045.08829 -3.51 40.59 4761 4761 MS2 29/64 Linfeng_091311_rIgG_9.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 233 3.31 0.00 1 19 25 3 489.95102 1467.83850 -3.14 34.09 3930 3930 MS2 29/44 Linfeng_091311_rIgG_9.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 198 3.27 0.00 1 18 25 3 547.31622 1639.93412 -2.26 29.46 3290 3290 MS2 24/56 Linfeng_091311_rIgG_5.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 190 3.20 0.00 1 36 25 3 547.31757 1639.93814 0.20 26.80 2592 2592 MS2 27/56 Linfeng_122411_rIgG_5.raw High RHPDYSVVLLLR Unambiguous 9 1 IPI00966829.1 CID 1.0000 0.0000 1 1 209 3.17 0.00 1 39 25 3 489.95081 1467.83786 -3.58 33.65 3915 3915 MS2 30/44 Linfeng_091311_rIgG_3.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 164 3.09 0.00 1 27 25 3 547.31512 1639.93082 -4.27 29.53 3398 3398 MS2 25/56 Linfeng_091311_rIgG_8.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 134 2.98 0.00 1 7 25 2 820.46960 1639.93193 -3.59 29.48 3091 3091 MS2 20/28 Linfeng_091311_rIgG_1.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 203 2.90 0.00 1 33 25 3 547.31580 1639.93283 -3.04 29.50 3329 3329 MS2 24/56 Linfeng_091311_rIgG_9.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 343 2.85 0.00 0 32 25 3 682.36816 2045.08994 -2.71 40.46 4776 4776 MS2 25/64 Linfeng_091311_rIgG_4.raw High KVPQVSTPTLVEVSR Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 175 2.83 0.00 1 17 25 3 547.31842 1639.94071 1.76 28.35 2755 2755 MS2 23/56 Linfeng_122411_rIgG_6.raw High TcVADESAENcDK Unambiguous 5 1 IPI00966829.1 C2(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 10 2.83 0.00 0 4 25 2 749.79285 1498.57842 -0.07 17.09 1602 1602 MS2 21/24 Linfeng_091311_rIgG_9.raw High ccTESLVNR Unambiguous 10 1 IPI00966829.1 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 92 2.82 0.00 0 9 25 2 569.75134 1138.49541 -2.28 20.92 2177 2177 MS2 15/16 Linfeng_091311_rIgG_4.raw High TcVADESAENcDK Unambiguous 5 1 IPI00966829.1 C2(Carbamidomethyl); C11(Carbamidomethyl) CID 1.0000 0.0000 1 1 10 2.78 0.00 0 4 25 2 749.79218 1498.57707 -0.96 16.93 1692 1692 MS2 21/24 Linfeng_091311_rIgG_10.raw High VFDEFKPLVEEPQNLIK Unambiguous 10 1 IPI00966829.1 CID 1.0000 0.0000 1 1 344 2.77 0.00 0 34 25 3 682.36816 2045.08994 -2.71 40.61 4763 4763 MS2 28/64 Linfeng_091311_rIgG_7.raw High YIcENQDSISSK Unambiguous 9 1 IPI00966829.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 2.63 0.00 0 8 25 2 722.32330 1443.63933 -1.90 21.52 2346 2346 MS2 20/22 Linfeng_091311_rIgG_10.raw High ccTESLVNR Unambiguous 10 1 IPI00966829.1 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 95 2.60 0.00 0 15 25 2 569.75116 1138.49504 -2.60 20.89 2181 2181 MS2 15/16 Linfeng_091311_rIgG_3.raw High ccTESLVNR Unambiguous 10 1 IPI00966829.1 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 77 2.56 0.00 0 19 25 2 569.75165 1138.49602 -1.74 17.84 1518 1518 MS2 15/16 Linfeng_091311_rIgG_1.raw High HPYFYAPELLFFAK Unambiguous 8 1 IPI00966829.1 CID 1.0000 0.0000 1 1 424 2.54 0.00 0 69 25 3 581.63495 1742.89029 -2.21 45.40 5402 5402 MS2 22/52 Linfeng_091311_rIgG_3.raw High YIcENQDSISSK Unambiguous 9 1 IPI00966829.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 80 2.54 0.00 0 15 25 2 722.32263 1443.63799 -2.83 21.63 2245 2245 MS2 19/22 Linfeng_091311_rIgG_9.raw High AAFTEccQAADK Unambiguous 7 1 IPI00966829.1 C6(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 23 2.52 0.00 0 16 25 2 686.28546 1371.56365 -2.32 20.86 2255 2255 MS2 15/22 Linfeng_091311_rIgG_10.raw High YIcENQDSISSK Unambiguous 9 1 IPI00966829.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 81 2.52 0.00 0 0 25 2 722.32355 1443.63982 -1.56 21.47 2253 2253 MS2 19/22 Linfeng_091311_rIgG_4.raw High YIcENQDSISSK Unambiguous 9 1 IPI00966829.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 2.35 0.00 0 4 25 2 722.32141 1443.63555 -4.52 21.71 2332 2332 MS2 18/22 Linfeng_091311_rIgG_8.raw High YIcENQDSISSK Unambiguous 9 1 IPI00966829.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 85 2.33 0.00 0 4 25 2 722.32349 1443.63970 -1.65 21.75 2299 2299 MS2 17/22 Linfeng_091311_rIgG_6.raw High LVNEVTEFAK Unambiguous 5 1 IPI00966829.1 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 0 25 2 575.30981 1149.61235 -2.37 30.04 3538 3538 MS2 16/18 Linfeng_091311_rIgG_10.raw High AAFTEccQAADK Unambiguous 7 1 IPI00966829.1 C6(Carbamidomethyl); C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 25 2.15 0.00 0 14 25 2 686.28448 1371.56169 -3.74 21.08 2166 2166 MS2 16/22 Linfeng_091311_rIgG_9.raw High ccTESLVNR Unambiguous 10 1 IPI00966829.1 C1(Carbamidomethyl); C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 94 2.13 0.00 0 24 25 2 569.75067 1138.49407 -3.45 21.18 2181 2181 MS2 14/16 Linfeng_091311_rIgG_9.raw High YLYEIAR Unambiguous 3 1 IPI00966829.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 51 25 2 464.25076 927.49425 0.85 27.15 2537 2537 MS2 11/12 Linfeng_122411_rIgG_4.raw High LVNEVTEFAK Unambiguous 5 1 IPI00966829.1 CID 1.0000 0.0000 1 1 363 2.01 0.00 0 18 25 2 575.30945 1149.61162 -3.00 30.16 3419 3419 MS2 15/18 Linfeng_091311_rIgG_9.raw High LVNEVTEFAK Unambiguous 5 1 IPI00966829.1 CID 1.0000 0.0000 1 1 394 2.01 0.00 0 58 25 2 575.31256 1149.61785 2.41 24.95 1908 1908 MS2 13/18 Linfeng_122411_rIgG_9.raw IPI00385042.4 Nucleolar GTP-binding protein 1 19.87 2 10 10 15 27.63 19.87 10 10 12.96 8.52 5 5 0.00 634 73.9 9.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IFTDLQSEGFPVIETSTLTEEGVIK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 305 4.83 0.00 0 35 25 3 918.47662 2753.41532 0.75 45.82 5452 5452 MS2 43/96 Linfeng_091311_rIgG_4.raw High KLEELEKEEELR Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 488 3.36 0.00 2 16 25 3 515.60889 1544.81211 -2.98 24.47 2672 2672 MS2 24/44 Linfeng_091311_rIgG_4.raw High ADVDVQPYAFTTK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 262 3.14 0.00 0 21 25 2 727.86328 1454.71929 2.09 30.43 2972 2972 MS2 18/24 Linfeng_122411_rIgG_4.raw High TLLLcGYPNVGK Unambiguous 2 1 IPI00385042.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 378 2.85 0.00 0 14 25 2 667.86182 1334.71636 1.96 33.17 3327 3327 MS2 19/22 Linfeng_122411_rIgG_4.raw High ADVDVQPYAFTTK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 232 2.82 0.00 0 22 25 2 727.86041 1454.71355 -1.85 31.82 3667 3667 MS2 18/24 Linfeng_091311_rIgG_4.raw High IAELSEDDQK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 268 2.76 0.00 0 5 25 2 574.27618 1147.54509 -2.34 20.69 2145 2145 MS2 16/18 Linfeng_091311_rIgG_4.raw High TLLLcGYPNVGK Unambiguous 2 1 IPI00385042.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.63 0.00 0 45 25 2 667.85907 1334.71086 -2.15 34.44 4008 4008 MS2 19/22 Linfeng_091311_rIgG_4.raw Medium DDKERPPFIPEGVVAR Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 346 2.46 0.00 1 28 25 3 608.99054 1824.95707 -1.82 31.90 3677 3677 MS2 30/60 Linfeng_091311_rIgG_4.raw High DFIDLTLSK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 357 2.45 0.00 0 6 25 2 526.28845 1051.56963 2.45 38.65 4019 4019 MS2 14/16 Linfeng_122411_rIgG_4.raw High FTQQNYHDR Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 131 2.40 0.00 0 6 25 2 604.77490 1208.54253 -1.49 15.34 1388 1388 MS2 14/16 Linfeng_091311_rIgG_4.raw High LSQILTDFPK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 381 2.34 0.00 0 32 25 2 581.32526 1161.64324 -7.07 35.14 4099 4099 MS2 16/18 Linfeng_091311_rIgG_4.raw High LALGQINIAK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 149 2.32 0.00 0 19 25 2 520.82800 1040.64873 2.32 31.73 3141 3141 MS2 16/18 Linfeng_122411_rIgG_4.raw High IAELSEDDQK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 368 2.20 0.00 0 10 25 2 574.28131 1147.55535 6.59 3.12 308 308 MS2 15/18 Linfeng_122411_rIgG_4.raw High DFIDLTLSK Unambiguous 1 1 IPI00385042.4 CID 1.0000 0.0000 1 1 294 2.01 0.00 0 12 25 2 526.28558 1051.56389 -3.01 39.89 4705 4705 MS2 12/16 Linfeng_091311_rIgG_4.raw High LALGQINIAK Unambiguous 2 1 IPI00385042.4 CID 1.0000 0.0000 1 1 115 2.01 0.00 0 16 25 2 520.82544 1040.64360 -2.60 33.18 3846 3846 MS2 16/18 Linfeng_091311_rIgG_4.raw IPI00028955.4 Ribosome biogenesis protein BOP1 19.84 3 10 10 18 30.45 16.35 9 11 24.83 12.33 5 7 746 83.6 6.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLGVLDVIFHPTQPWVFSSGADGTVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 299 6.43 0.00 0 19 25 3 938.48340 2813.43564 3.48 52.34 5632 5632 MS2 43/100 Linfeng_122411_rIgG_3.raw High LALPGHAESYNPPPEYLLSEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 257 3.86 0.00 0 4 25 3 871.09125 2611.25919 -3.21 35.59 4166 4166 MS2 35/88 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 269 3.64 0.00 0 18 25 3 878.13629 2632.39432 -1.49 44.90 5340 5340 MS2 24/96 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 225 3.60 0.00 0 6 25 3 878.14050 2632.40696 3.31 43.88 4560 4560 MS2 29/96 Linfeng_122411_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 618 3.29 0.00 0 45 25 2 572.32275 1143.63823 1.19 24.86 2231 2231 MS2 17/18 Linfeng_122411_rIgG_4.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 520 3.13 0.00 0 13 25 2 572.32056 1143.63384 -2.65 27.74 3128 3128 MS2 17/18 Linfeng_091311_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 545 3.13 0.00 0 18 25 2 572.32349 1143.63970 2.47 22.94 1857 1857 MS2 15/18 Linfeng_122411_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 537 3.02 0.00 0 26 25 2 572.32367 1143.64006 2.79 23.94 1972 1972 MS2 17/18 Linfeng_122411_rIgG_3.raw High LALPGHAESYNPPPEYLLSEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 259 2.89 0.00 0 9 25 3 871.09552 2611.27201 1.70 34.85 3397 3397 MS2 29/88 Linfeng_122411_rIgG_3.raw High TRDELDQFLDK Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 325 2.84 0.00 1 4 25 3 460.56393 1379.67725 -2.14 32.94 3824 3824 MS2 22/40 Linfeng_091311_rIgG_3.raw High LVAGSTDQLLSAFVPPEEPPLQPAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 275 2.77 0.00 0 22 25 3 878.13611 2632.39377 -1.69 45.22 5376 5376 MS2 21/96 Linfeng_091311_rIgG_4.raw High TTEEQVQASTPcPR Unambiguous 1 1 IPI00028955.4 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 133 2.63 0.00 0 17 25 2 802.37115 1603.73503 -1.93 21.30 2236 2236 MS2 18/26 Linfeng_091311_rIgG_3.raw High LAWEQQEPGER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 226 2.53 0.00 0 24 25 2 671.82196 1342.63664 -1.51 26.85 3007 3007 MS2 17/20 Linfeng_091311_rIgG_3.raw High LWEVATAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 813 2.47 0.00 0 20 25 2 473.26227 945.51726 2.08 26.74 2341 2341 MS2 13/14 Linfeng_122411_rIgG_3.raw High VNVDPEDLIPK Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 311 2.42 0.00 0 28 25 2 619.83319 1238.65911 -2.95 37.11 4360 4360 MS2 16/20 Linfeng_091311_rIgG_3.raw High LTDEQVALVR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 554 2.31 0.00 0 31 25 2 572.32074 1143.63420 -2.33 27.87 3139 3139 MS2 16/18 Linfeng_091311_rIgG_4.raw High WLEASEEER Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 139 2.21 0.00 0 23 25 2 574.76215 1148.51702 -4.25 25.31 2795 2795 MS2 13/16 Linfeng_091311_rIgG_3.raw High LWEVATAR Unambiguous 3 1 IPI00028955.4 CID 1.0000 0.0000 1 1 486 2.11 0.00 0 22 25 2 473.26007 945.51286 -2.57 29.15 3320 3320 MS2 12/14 Linfeng_091311_rIgG_3.raw IPI00239815.9 Isoform 1 of Cirhin 19.83 4 10 10 18 22.47 13.56 7 8 33.84 13.70 6 10 686 76.8 8.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDGTVEIYNLSANYFQEK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 246 4.74 0.00 0 6 25 3 698.00287 2091.99405 3.37 39.83 4166 4166 MS2 39/68 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 345 4.03 0.00 0 11 25 2 988.51331 1976.01933 3.49 38.86 4045 4045 MS2 20/32 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 311 4.00 0.00 0 23 25 2 988.50690 1976.00652 -3.00 40.01 4720 4720 MS2 21/32 Linfeng_091311_rIgG_4.raw High TDGTVEIYNLSANYFQEK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 207 3.93 0.00 0 3 25 2 1046.50061 2091.99394 3.32 39.85 4168 4168 MS2 22/34 Linfeng_122411_rIgG_4.raw High TLLYNPFPPTNESDVIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 398 3.77 0.00 0 26 25 3 659.34473 1976.01963 3.64 38.83 4041 4041 MS2 28/64 Linfeng_122411_rIgG_4.raw High IYKPLLFMDLLDER Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 348 3.39 0.00 0 26 25 3 589.32312 1765.95481 -0.56 46.36 5519 5519 MS2 29/52 Linfeng_091311_rIgG_4.raw High ATEALcWAEGQR Unambiguous 3 1 IPI00239815.9 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 184 3.25 0.00 0 24 25 3 464.55136 1391.63953 1.61 29.38 2834 2834 MS2 24/44 Linfeng_122411_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 328 3.15 0.00 0 21 25 2 719.87720 1438.74712 3.24 38.80 4038 4038 MS2 20/24 Linfeng_122411_rIgG_4.raw High ATEALcWAEGQR Unambiguous 3 1 IPI00239815.9 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 175 3.01 0.00 0 22 25 2 696.32373 1391.64018 2.08 29.34 2829 2829 MS2 18/22 Linfeng_122411_rIgG_4.raw High TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 35 2.97 0.00 0 40 25 3 766.78528 2298.34128 -0.87 45.75 5444 5444 MS2 27/80 Linfeng_091311_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 330 2.95 0.00 0 28 25 2 719.87317 1438.73906 -2.36 39.92 4709 4709 MS2 20/24 Linfeng_091311_rIgG_4.raw Medium TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 34 2.84 0.00 0 31 25 4 575.34241 2298.34780 1.97 44.54 4760 4760 MS2 35/120 Linfeng_122411_rIgG_4.raw Medium TLVAVERPLDDIIAQLPPPIK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 40 2.72 0.00 0 4 25 4 575.34064 2298.34072 -1.11 45.78 5447 5447 MS2 37/120 Linfeng_091311_rIgG_4.raw High SALQILFSEDSTK Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 403 2.59 0.00 0 9 25 3 480.25366 1438.74643 2.76 38.85 4043 4043 MS2 21/48 Linfeng_122411_rIgG_4.raw High VQFWDSATGTLVK Unambiguous 4 1 IPI00239815.9 CID 1.0000 0.0000 1 1 402 2.53 0.00 0 11 25 2 726.38184 1451.75640 2.36 35.66 3641 3641 MS2 14/24 Linfeng_122411_rIgG_4.raw High LFQITPDK Unambiguous 4 1 IPI00239815.9 CID 1.0000 0.0000 1 1 450 2.29 0.00 0 23 25 2 481.26987 961.53246 -3.01 30.42 3484 3484 MS2 13/14 Linfeng_091311_rIgG_4.raw High cVAYNNQSNR Unambiguous 3 1 IPI00239815.9 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.08 0.00 0 0 25 2 613.27222 1225.53716 -0.59 15.25 1374 1374 MS2 14/18 Linfeng_091311_rIgG_4.raw High FFNYVPSGIR Unambiguous 3 1 IPI00239815.9 CID 1.0000 0.0000 1 1 290 2.06 0.00 0 26 25 2 600.31000 1199.61272 -6.75 35.12 4096 4096 MS2 14/18 Linfeng_091311_rIgG_4.raw IPI00396435.3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 19.62 1 10 10 22 31.82 14.34 7 10 15.39 6.16 4 5 22.26 8.30 5 7 795 90.9 7.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FAHIDGDHLTLLNVYHAFK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 370 4.16 0.00 0 12 25 4 553.53674 2211.12514 -4.29 37.83 4450 4450 MS2 39/108 Linfeng_091311_rIgG_3.raw High FQIYFDNcPLLTIPGR Unambiguous 1 1 IPI00396435.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 287 3.78 0.00 0 42 25 2 977.49969 1953.99211 1.49 46.84 5582 5582 MS2 18/30 Linfeng_091311_rIgG_3.raw High DNQVVQLHPSTVLDHKPEWVLYNEFVLTTK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 202 3.68 0.00 0 9 25 5 710.77289 3549.83533 -0.69 42.48 5036 5036 MS2 51/232 Linfeng_091311_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 291 3.51 0.00 0 7 25 2 693.34375 1385.68022 0.49 29.87 2753 2753 MS2 19/24 Linfeng_122411_rIgG_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 337 3.43 0.00 0 30 100 2 579.35010 1157.69292 3.47 44.65 5653 5653 MS2 15/20 Linfeng_20120130_CHD1_4.raw High TTQIPQWcVEYmR Unambiguous 1 1 IPI00396435.3 C8(Carbamidomethyl); M12(Oxidation) CID 1.0000 0.0000 1 1 297 3.41 0.00 0 6 100 2 864.39990 1727.79253 2.59 38.68 3738 3738 MS2 19/24 Linfeng_20120130_CHD1_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 290 3.41 0.00 0 22 25 2 693.34167 1385.67607 -2.51 31.19 3592 3592 MS2 19/24 Linfeng_091311_rIgG_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 510 3.36 0.00 0 11 100 2 693.34473 1385.68218 1.89 33.18 2654 2654 MS2 18/24 Linfeng_20120130_CHD1_3.raw High EVDDLGPEVGDIK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 512 3.26 0.00 0 8 100 2 693.34576 1385.68425 3.39 33.39 3350 3350 MS2 20/24 Linfeng_20120130_CHD1_4.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 323 3.25 0.00 0 13 100 2 579.35059 1157.69390 4.31 44.55 4816 4816 MS2 16/20 Linfeng_20120130_CHD1_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 389 3.03 0.00 0 22 25 3 472.24786 1414.72904 -2.49 30.99 3566 3566 MS2 24/44 Linfeng_091311_rIgG_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 349 3.03 0.00 0 6 25 2 579.34680 1157.68633 -2.22 34.31 3328 3328 MS2 17/20 Linfeng_122411_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 400 3.01 0.00 0 7 25 3 472.24963 1414.73435 1.26 29.63 2721 2721 MS2 27/44 Linfeng_122411_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 405 3.00 0.00 0 25 25 3 472.25000 1414.73545 2.04 29.69 2875 2875 MS2 22/44 Linfeng_122411_rIgG_4.raw High TEmQDNTYPEILR Unambiguous 1 1 IPI00396435.3 M3(Oxidation) CID 1.0000 0.0000 1 1 379 2.97 0.00 0 4 100 2 813.38092 1625.75456 4.27 33.45 2707 2707 MS2 16/24 Linfeng_20120130_CHD1_3.raw Medium FAHIDGDHLTLLNVYHAFK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 368 2.95 0.00 0 2 25 5 443.03110 2211.12638 -3.73 37.81 4448 4448 MS2 46/144 Linfeng_091311_rIgG_3.raw High YGVIILDEAHER Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 382 2.95 0.00 0 18 25 3 472.24802 1414.72950 -2.17 31.12 3575 3575 MS2 24/44 Linfeng_091311_rIgG_4.raw High IRVESLLVTAISK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 56 2.83 0.00 1 10 25 3 476.96518 1428.88099 1.73 36.57 3615 3615 MS2 24/48 Linfeng_122411_rIgG_3.raw High SNLGSVVLQLK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 364 2.77 0.00 0 5 22 2 579.34485 1157.68242 -5.60 35.35 4135 4135 MS2 17/20 Linfeng_091311_rIgG_3.raw High ASTNAmLISAGLPPLK Unambiguous 1 1 IPI00396435.3 M6(Oxidation) CID 1.0000 0.0000 1 1 402 2.58 0.00 0 5 100 2 800.44525 1599.88323 3.55 42.17 4340 4340 MS2 19/30 Linfeng_20120130_CHD1_3.raw High IRVESLLVTAISK Unambiguous 1 1 IPI00396435.3 CID 1.0000 0.0000 1 1 57 2.57 0.00 1 4 25 3 476.96286 1428.87403 -3.14 37.12 4361 4361 MS2 25/48 Linfeng_091311_rIgG_3.raw High FQIYFDNcPLLTIPGR Unambiguous 1 1 IPI00396435.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.52 0.00 0 12 25 3 652.00104 1953.98856 -0.33 46.65 5558 5558 MS2 25/60 Linfeng_091311_rIgG_3.raw IPI00304187.8 RNA-binding protein 28 19.50 4 12 12 17 27.90 16.60 11 11 19.06 10.67 6 6 759 85.7 9.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLSFDSEEEELGELLQQFGELK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 237 5.45 0.00 0 2 25 3 852.08142 2554.22971 3.94 54.65 5892 5892 MS2 37/84 Linfeng_122411_rIgG_3.raw High SEQLEELFSQVGPVK Unambiguous 3 1 IPI00304187.8 CID 1.0000 0.0000 1 1 411 4.25 0.00 0 5 25 3 563.96252 1689.87302 2.10 40.10 4069 4069 MS2 32/56 Linfeng_122411_rIgG_3.raw High SEQLEELFSQVGPVK Unambiguous 3 1 IPI00304187.8 CID 1.0000 0.0000 1 1 412 3.48 0.00 0 5 25 3 563.96002 1689.86551 -2.34 41.04 4855 4855 MS2 33/56 Linfeng_091311_rIgG_3.raw High AEVEQVELPDGK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 304 3.36 0.00 0 21 25 2 657.33118 1313.65508 -2.54 27.98 3161 3161 MS2 17/22 Linfeng_091311_rIgG_3.raw High DTQSVSAIGEEK Unambiguous 4 1 IPI00304187.8 CID 1.0000 0.0000 1 1 256 2.72 0.00 0 30 25 2 632.30414 1263.60100 -4.24 22.15 2354 2354 MS2 19/22 Linfeng_091311_rIgG_3.raw High cLLAASPENEAGGLK Unambiguous 3 1 IPI00304187.8 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 2.69 0.00 0 18 25 2 765.38708 1529.76689 2.61 28.08 2517 2517 MS2 17/28 Linfeng_122411_rIgG_3.raw High cLLAASPENEAGGLK Unambiguous 3 1 IPI00304187.8 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.63 0.00 0 10 25 2 765.38354 1529.75981 -2.02 29.72 3397 3397 MS2 19/28 Linfeng_091311_rIgG_3.raw High AGSTSWTGFQTK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 166 2.51 0.00 0 36 25 2 635.80518 1270.60307 -2.53 28.62 3247 3247 MS2 17/22 Linfeng_091311_rIgG_3.raw High DQNIFVSR Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 390 2.46 0.00 0 95 25 2 489.75171 978.49614 -4.31 27.96 3157 3157 MS2 13/14 Linfeng_091311_rIgG_3.raw High AGSTSWTGFQTK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 185 2.44 0.00 0 31 25 2 635.80829 1270.60930 2.37 26.07 2250 2250 MS2 16/22 Linfeng_122411_rIgG_3.raw High LINNNPEIFGPLK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 279 2.43 0.00 0 12 25 2 734.91034 1468.81340 -1.71 35.87 4202 4202 MS2 18/24 Linfeng_091311_rIgG_3.raw High DQNIFVSR Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 396 2.20 0.00 0 76 25 2 489.75430 978.50133 0.99 24.32 2021 2021 MS2 13/14 Linfeng_122411_rIgG_3.raw High TVAVDWAVAK Unambiguous 4 1 IPI00304187.8 CID 1.0000 0.0000 1 1 530 2.17 0.00 0 32 25 2 530.29388 1059.58049 -2.73 31.18 3591 3591 MS2 16/18 Linfeng_091311_rIgG_3.raw High AAEGVSAADMAK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 244 2.10 0.00 0 61 25 2 560.76776 1120.52825 -1.91 21.31 2237 2237 MS2 14/22 Linfeng_091311_rIgG_3.raw High FNQLVEQYK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 304 2.04 0.00 0 11 25 2 584.80414 1168.60100 1.09 4.69 532 532 MS2 14/16 Linfeng_122411_rIgG_3.raw High FNQLVEQYK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 328 2.02 0.00 0 36 25 2 584.80200 1168.59673 -2.57 27.23 3059 3059 MS2 14/16 Linfeng_091311_rIgG_3.raw High GFGFVQFK Unambiguous 2 1 IPI00304187.8 CID 1.0000 0.0000 1 1 318 2.01 0.00 0 15 25 2 465.24561 929.48393 -4.39 36.70 4308 4308 MS2 13/14 Linfeng_091311_rIgG_3.raw IPI00013174.2 Isoform 1 of RNA-binding protein 14 19.43 2 11 11 29 21.53 13.15 7 7 28.08 14.05 7 9 35.78 11.36 5 13 669 69.4 9.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 244 4.58 0.00 0 4 25 3 822.39612 2465.17380 -2.70 27.02 3023 3023 MS2 34/92 Linfeng_091311_rIgG_4.raw High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 254 4.41 0.00 0 6 13 3 822.39691 2465.17618 -1.74 4.35 502 502 MS2 33/92 Linfeng_122411_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 570 4.29 0.00 0 20 100 2 876.44379 1751.88030 3.27 35.61 3833 3833 MS2 25/30 Linfeng_20120130_CHD1_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 342 4.24 0.00 0 8 25 2 876.43921 1751.87114 -1.96 31.48 3621 3621 MS2 27/30 Linfeng_091311_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 351 4.24 0.00 0 5 25 2 876.44257 1751.87786 1.87 30.24 2947 2947 MS2 25/30 Linfeng_122411_rIgG_4.raw High IFVGNVSAAcTSQELR Unambiguous 1 1 IPI00013174.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.97 0.00 0 12 25 3 584.63055 1751.87711 1.45 30.19 2941 2941 MS2 34/60 Linfeng_122411_rIgG_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 445 3.56 0.00 0 19 25 3 536.95203 1608.84153 2.14 28.55 2724 2724 MS2 36/56 Linfeng_122411_rIgG_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 541 3.36 0.00 0 0 100 2 804.92505 1608.84282 2.95 32.90 3237 3237 MS2 20/28 Linfeng_20120130_CHD1_4.raw High KGPGLAVQSGDK Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 320 3.33 0.00 1 52 25 3 386.21494 1156.63025 -1.62 16.83 1599 1599 MS2 23/44 Linfeng_091311_rIgG_4.raw High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 512 3.09 0.00 0 71 100 3 822.40057 2465.18717 2.72 28.77 2392 2392 MS2 24/92 Linfeng_20120130_CHD1_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 527 2.96 0.00 0 3 100 2 804.92542 1608.84355 3.40 32.72 3196 3196 MS2 19/28 Linfeng_20120130_CHD1_4.raw High TQSSASLAASYAAQQHPQAAASYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 528 2.84 0.00 0 16 100 3 822.40106 2465.18863 3.31 28.52 2339 2339 MS2 21/92 Linfeng_20120130_CHD1_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 371 2.80 0.00 0 6 25 2 804.92487 1608.84245 2.72 28.54 2723 2723 MS2 21/28 Linfeng_122411_rIgG_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 496 2.77 0.00 0 49 100 2 533.78180 1066.55632 3.31 30.24 2675 2675 MS2 15/16 Linfeng_20120130_CHD1_4.raw High AQPSVSLGAPYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 679 2.57 0.00 0 16 100 2 623.33441 1245.66155 2.32 27.03 2055 2055 MS2 15/22 Linfeng_20120130_CHD1_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 294 2.54 0.00 0 27 25 2 533.77881 1066.55034 -2.30 29.01 3294 3294 MS2 15/16 Linfeng_091311_rIgG_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 472 2.50 0.00 0 50 100 2 533.78186 1066.55644 3.42 29.86 2595 2595 MS2 14/16 Linfeng_20120130_CHD1_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 512 2.47 0.00 0 11 100 2 804.92560 1608.84392 3.63 32.64 3179 3179 MS2 16/28 Linfeng_20120130_CHD1_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 353 2.40 0.00 0 54 25 2 533.78131 1066.55535 2.39 27.02 2520 2520 MS2 15/16 Linfeng_122411_rIgG_4.raw High AQPSVSLGAPYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 635 2.40 0.00 0 27 100 2 623.33459 1245.66191 2.61 26.89 2024 2024 MS2 13/22 Linfeng_20120130_CHD1_4.raw High ASYVAPLTAQPATYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 419 2.38 0.00 0 17 25 2 804.92139 1608.83550 -1.61 30.17 3450 3450 MS2 20/28 Linfeng_091311_rIgG_4.raw High YSGSYNDYLR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 128 2.37 0.00 0 12 25 2 619.27954 1237.55181 2.75 26.50 2451 2451 MS2 17/18 Linfeng_122411_rIgG_4.raw High GPGLAVQSGDK Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 308 2.36 0.00 0 26 25 2 514.77075 1028.53423 -2.85 19.75 2011 2011 MS2 15/20 Linfeng_091311_rIgG_4.raw High AQPSASLGVGYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 463 2.30 0.00 0 22 7 2 603.31665 1205.62602 -1.11 4.17 474 474 MS2 18/22 Linfeng_122411_rIgG_4.raw High AQPSVSLGAPYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 693 2.28 0.00 0 8 100 2 623.33441 1245.66155 2.32 26.74 1997 1997 MS2 11/22 Linfeng_20120130_CHD1_4.raw High AQPSVSLGAPYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 587 2.21 0.00 0 26 100 2 623.33392 1245.66057 1.53 26.81 2010 2010 MS2 12/22 Linfeng_20120130_CHD1_4.raw High AQPSVSLGAAYR Unambiguous 2 1 IPI00013174.2 CID 1.0000 0.0000 1 1 471 2.10 0.00 0 34 25 2 610.32300 1219.63872 -3.52 27.25 3054 3054 MS2 15/22 Linfeng_091311_rIgG_4.raw High LSESQLSFR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 466 2.04 0.00 0 46 100 2 533.78162 1066.55596 2.97 29.94 2612 2612 MS2 15/16 Linfeng_20120130_CHD1_4.raw High LAELSDYR Unambiguous 1 1 IPI00013174.2 CID 1.0000 0.0000 1 1 380 2.03 0.00 0 44 25 2 483.74927 966.49126 2.21 21.76 1842 1842 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00013881.6 Heterogeneous nuclear ribonucleoprotein H 19.15 3 4 5 15 17.13 10.47 3 5 35.19 16.26 4 10 449 49.2 6.30 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 319 4.76 0.00 0 8 16 2 998.99146 1996.97563 -0.38 45.11 5092 5092 MS2 22/32 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 357 4.25 0.00 0 2 21 3 666.32965 1996.97440 -1.00 45.05 5084 5084 MS2 31/64 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 297 4.22 0.00 0 29 25 2 998.99023 1996.97319 -1.60 46.37 5483 5483 MS2 21/32 Linfeng_091311_rIgG_5.raw High STGEAFVQFASQEIAEK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 274 3.81 0.00 0 10 13 3 614.63593 1841.89322 0.84 39.33 4318 4318 MS2 38/64 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 345 3.65 0.00 0 18 25 3 666.32959 1996.97422 -1.09 46.30 5486 5486 MS2 27/64 Linfeng_091311_rIgG_6.raw High STGEAFVQFASQEIAEK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 237 3.63 0.00 0 28 25 2 921.44617 1841.88506 -3.59 40.32 4712 4712 MS2 21/32 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 369 3.58 0.00 0 35 25 3 666.33215 1996.98191 2.76 45.23 4330 4330 MS2 25/64 Linfeng_122411_rIgG_7.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 381 3.49 0.00 0 22 25 3 666.33228 1996.98227 2.95 45.17 4483 4483 MS2 24/64 Linfeng_122411_rIgG_9.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 364 3.26 0.00 0 16 25 3 666.33215 1996.98191 2.76 45.20 4890 4890 MS2 28/64 Linfeng_122411_rIgG_6.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 328 3.26 0.00 0 13 25 3 666.32922 1996.97312 -1.64 46.36 5481 5481 MS2 29/64 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 344 3.15 0.00 0 11 25 2 998.99548 1996.98369 3.65 45.17 4886 4886 MS2 20/32 Linfeng_122411_rIgG_6.raw High EGRPSGEAFVELESEDEVK Unambiguous 3 1 IPI00013881.6 CID 1.0000 0.0000 1 1 221 3.09 0.00 0 21 25 3 702.99854 2106.98105 -0.78 30.52 3104 3104 MS2 27/72 Linfeng_122411_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 360 2.91 0.00 0 16 25 2 998.99481 1996.98235 2.98 45.21 4488 4488 MS2 15/32 Linfeng_122411_rIgG_9.raw High YVELFLNSTAGASGGAYEHR Unambiguous 2 1 IPI00013881.6 CID 1.0000 0.0000 1 1 274 2.87 0.00 0 25 18 3 714.67932 2142.02341 -0.80 33.26 3478 3478 MS2 25/76 Linfeng_122411_rIgG_5.raw High GLPWScSADEVQR Unambiguous 3 1 IPI00013881.6 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 111 2.37 0.00 0 17 25 2 752.84387 1504.68047 -3.00 31.79 3601 3601 MS2 19/24 Linfeng_091311_rIgG_5.raw IPI00300078.6 Periodic tryptophan protein 2 homolog 19.15 1 12 12 24 34.17 14.80 9 11 23.21 10.23 6 7 14.55 4.57 4 6 919 102.4 6.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADLLQREEEEEEEEDQEGDRETTIR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 74 5.88 0.00 2 2 25 4 762.84528 3048.35927 2.59 28.14 2525 2525 MS2 44/144 Linfeng_122411_rIgG_3.raw High ADLLQREEEEEEEEDQEGDRETTIR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 68 4.98 0.00 2 9 25 4 762.84247 3048.34804 -1.09 28.76 3267 3267 MS2 39/144 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 322 3.85 0.00 0 10 25 2 896.96283 1792.91838 3.74 44.71 4667 4667 MS2 23/30 Linfeng_122411_rIgG_3.raw High GEIEVVTSSLPELYVEK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 322 3.77 0.00 0 33 25 2 946.49615 1891.98503 -2.62 41.31 4891 4891 MS2 20/32 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 341 3.72 0.00 0 29 25 2 896.95892 1792.91057 -0.62 45.84 5457 5457 MS2 22/30 Linfeng_091311_rIgG_3.raw High GNLNFTcDGNSVISPVGNR Unambiguous 1 1 IPI00300078.6 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 3.65 0.00 0 21 25 3 674.32275 2020.95371 1.54 32.65 3116 3116 MS2 30/72 Linfeng_122411_rIgG_3.raw High cWAATTTEGLLIYSLDTR Unambiguous 1 1 IPI00300078.6 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 308 3.35 0.00 0 28 25 3 691.01001 2071.01548 -0.52 45.53 5419 5419 MS2 26/68 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 388 3.15 0.00 0 12 25 3 598.30817 1792.90995 -0.97 45.85 5458 5458 MS2 34/60 Linfeng_091311_rIgG_3.raw High WDNLIYYALGGHK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 399 2.96 0.00 0 1 25 3 517.26392 1549.77719 -1.70 41.60 4927 4927 MS2 26/48 Linfeng_091311_rIgG_3.raw High VLFDPFELDTSVTPGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 392 2.88 0.00 0 6 25 3 598.31042 1792.91672 2.81 44.69 4665 4665 MS2 32/60 Linfeng_122411_rIgG_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 261 2.78 0.00 0 40 100 2 612.85303 1224.69878 3.30 36.11 3239 3239 MS2 14/20 Linfeng_20120130_CHD1_3.raw High GSVHSVSFSPDGR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 230 2.78 0.00 0 29 25 3 444.54810 1331.62973 -3.14 23.09 2484 2484 MS2 20/48 Linfeng_091311_rIgG_3.raw High FSNLLGTVYR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 420 2.62 0.00 0 27 100 2 585.32153 1169.63579 3.78 44.46 4797 4797 MS2 15/18 Linfeng_20120130_CHD1_3.raw High AGTLLPVIQFLQK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 65 2.56 0.00 0 20 25 2 714.43726 1427.86724 3.57 45.51 4771 4771 MS2 18/24 Linfeng_122411_rIgG_3.raw High GEIEVVTSSLPELYVEK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 353 2.53 0.00 0 6 25 3 631.33350 1891.98594 -2.14 41.36 4896 4896 MS2 25/64 Linfeng_091311_rIgG_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 247 2.51 0.00 0 30 100 2 612.85339 1224.69951 3.90 36.69 3347 3347 MS2 15/20 Linfeng_20120130_CHD1_3.raw High AGTLLPVIQFLQK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 114 2.42 0.00 0 28 25 2 714.43396 1427.86064 -1.04 46.73 5569 5569 MS2 17/24 Linfeng_091311_rIgG_3.raw High DmSTWVFGAER Unambiguous 1 1 IPI00300078.6 M2(Oxidation) CID 1.0000 0.0000 1 1 146 2.38 0.00 0 32 100 2 657.79449 1314.58171 2.53 39.93 3971 3971 MS2 13/20 Linfeng_20120130_CHD1_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 215 2.33 0.00 0 27 25 2 612.84924 1224.69121 -2.88 31.72 3664 3664 MS2 19/20 Linfeng_091311_rIgG_3.raw High DmSTWVFGAER Unambiguous 1 1 IPI00300078.6 M2(Oxidation) CID 1.0000 0.0000 1 1 140 2.25 0.00 0 18 100 2 657.79456 1314.58183 2.62 40.08 3998 3998 MS2 14/20 Linfeng_20120130_CHD1_3.raw High LVQEALEAVPR Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 225 2.20 0.00 0 16 25 2 612.85162 1224.69597 1.01 30.62 2851 2851 MS2 18/20 Linfeng_122411_rIgG_3.raw High SVLASASWDK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 479 2.19 0.00 0 23 25 2 532.27570 1063.54411 2.08 25.76 2210 2210 MS2 14/18 Linfeng_122411_rIgG_3.raw High SVLASASWDK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 398 2.18 0.00 0 7 25 2 532.27325 1063.53923 -2.51 28.46 3225 3225 MS2 14/18 Linfeng_091311_rIgG_3.raw High SVLASASWDK Unambiguous 1 1 IPI00300078.6 CID 1.0000 0.0000 1 1 660 2.00 0.00 0 10 100 2 532.27557 1063.54387 1.85 28.33 1956 1956 MS2 12/18 Linfeng_20120130_CHD1_3.raw IPI00024279.4 HEAT repeat-containing protein 1 19.12 2 28 28 40 12.88 1.91 3 5 87.59 16.60 25 29 23.66 3.68 5 6 2144 242.2 6.54 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SQDLESVQEVGGSYWQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 371 5.45 0.00 0 0 100 2 984.46289 1967.91850 4.61 38.72 3926 3926 MS2 25/32 Linfeng_20120130_CHD1_2.raw High SQDLESVQEVGGSYWQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 364 5.09 0.00 0 4 100 2 984.46216 1967.91704 3.87 38.94 3969 3969 MS2 23/32 Linfeng_20120130_CHD1_2.raw High NTSELVSSEVYLLSALAALQK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 243 4.83 0.00 0 9 25 3 746.07635 2236.21451 3.27 53.48 5759 5759 MS2 33/80 Linfeng_122411_rIgG_2.raw High LLETVLGYISAVAQSMER Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 354 4.74 0.00 0 33 25 3 660.68958 1980.05417 3.56 55.70 6001 6001 MS2 35/68 Linfeng_122411_rIgG_2.raw High AEEITSDAAYVIQDLATLFEELQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 491 4.64 0.00 0 0 52 3 909.12512 2725.36081 1.47 55.46 7107 7107 MS2 31/92 Linfeng_20120130_CHD1_2.raw High ITKPFFAAISDEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 391 4.36 0.00 0 6 25 3 489.60193 1466.79123 1.50 31.10 2946 2946 MS2 28/48 Linfeng_122411_rIgG_2.raw High FAALITVLALAEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 48 3.56 0.00 0 21 25 2 680.41785 1359.82842 2.74 48.37 5138 5138 MS2 22/24 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 512 3.50 0.00 0 24 100 2 721.86487 1442.72246 4.32 37.87 3750 3750 MS2 18/22 Linfeng_20120130_CHD1_2.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 130 3.41 0.00 0 6 25 3 514.64087 1541.90805 1.94 44.71 4673 4673 MS2 27/48 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 306 3.33 0.00 0 11 25 2 721.86395 1442.72063 3.05 32.43 3119 3119 MS2 20/22 Linfeng_122411_rIgG_2.raw High GWEEALENVIK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 426 3.32 0.00 0 8 25 2 644.33472 1287.66216 3.22 42.99 4453 4453 MS2 17/20 Linfeng_122411_rIgG_2.raw High ELYAGMPTIQITALEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 364 3.32 0.00 0 11 25 2 889.47650 1777.94573 2.92 40.35 4118 4118 MS2 21/30 Linfeng_122411_rIgG_2.raw High GIPVELWAHYVEELNSTQR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 337 3.28 0.00 0 6 25 3 747.71747 2241.13785 3.53 45.29 4748 4748 MS2 30/72 Linfeng_122411_rIgG_2.raw High IISVFVDALPHVPEHR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 342 3.26 0.00 0 4 25 4 458.00781 1829.00942 1.37 36.27 3603 3603 MS2 37/90 Linfeng_122411_rIgG_2.raw High LDDTYSFQVINK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 321 3.25 0.00 0 20 25 3 481.57800 1442.71946 2.23 32.52 3130 3130 MS2 24/44 Linfeng_122411_rIgG_2.raw High HQLASISSPVVTSLLINLGSPVK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 45 3.18 0.00 0 17 25 3 787.45844 2360.36075 2.49 44.62 4661 4661 MS2 29/88 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 131 3.06 0.00 0 19 25 3 566.67188 1698.00107 3.61 50.30 5379 5379 MS2 26/56 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 149 3.04 0.00 0 15 25 3 566.66998 1697.99540 0.27 51.46 5987 5987 MS2 23/56 Linfeng_091311_rIgG_1.raw High DGLScLIVLLQR Unambiguous 2 1 IPI00024279.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 415 2.95 0.00 0 26 25 2 693.89441 1386.78154 2.98 49.44 5273 5273 MS2 17/22 Linfeng_122411_rIgG_2.raw High SPQILVPTLFNLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 99 2.91 0.00 0 6 25 2 849.50446 1698.00163 3.94 50.29 5378 5378 MS2 20/28 Linfeng_122411_rIgG_2.raw High TDEAFFDSENDPEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 26 2.90 0.00 0 23 25 2 822.34180 1643.67632 3.34 28.41 2592 2592 MS2 17/26 Linfeng_122411_rIgG_2.raw High YNEFSVSLLNEDPK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 256 2.89 0.00 0 8 25 2 827.90326 1654.79924 1.99 36.15 3588 3588 MS2 20/26 Linfeng_122411_rIgG_2.raw High ELYAGMPTIQITALEK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 432 2.82 0.00 0 23 25 3 593.32037 1777.94657 3.39 40.36 4119 4119 MS2 24/60 Linfeng_122411_rIgG_2.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 119 2.77 0.00 0 22 25 2 771.45844 1541.90959 2.94 44.67 4668 4668 MS2 20/24 Linfeng_122411_rIgG_2.raw High EELTSHQSQLTAFFLEALDFR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 317 2.76 0.00 0 24 25 3 828.08441 2482.23868 5.52 50.26 5375 5375 MS2 20/80 Linfeng_122411_rIgG_2.raw High FAALITVLALAEK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 84 2.75 0.00 0 65 25 2 680.41479 1359.82231 -1.75 49.44 5741 5741 MS2 21/24 Linfeng_091311_rIgG_1.raw High DEVASLLFDPK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 391 2.73 0.00 0 8 25 2 617.32275 1233.63823 1.64 39.43 4003 4003 MS2 16/20 Linfeng_122411_rIgG_2.raw High TIQQLETVLGEPLQSYF Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 381 2.65 0.00 0 28 25 3 656.01276 1966.02372 3.49 52.03 5591 5591 MS2 19/64 Linfeng_122411_rIgG_2.raw High VFAEYPGSSAQLR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 531 2.56 0.00 0 26 100 2 712.86432 1424.72136 3.12 31.51 2500 2500 MS2 14/24 Linfeng_20120130_CHD1_2.raw Medium VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 168 2.49 0.00 0 4 25 3 514.63824 1541.90018 -3.17 45.83 5279 5279 MS2 22/48 Linfeng_091311_rIgG_1.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 153 2.47 0.00 0 29 25 2 771.45374 1541.90019 -3.16 45.74 5267 5267 MS2 18/24 Linfeng_091311_rIgG_1.raw Medium AYDLLDKVNALLPTETFIPVIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 92 2.47 0.00 1 14 25 3 834.47534 2501.41147 3.99 49.54 5285 5285 MS2 25/84 Linfeng_122411_rIgG_2.raw High LALPQSDASLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 371 2.42 0.00 0 41 100 2 685.88861 1370.76995 4.43 40.48 4302 4302 MS2 16/24 Linfeng_20120130_CHD1_2.raw High GLVGNPLPSVR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 215 2.35 0.00 0 15 25 2 554.82721 1108.64714 -0.22 29.89 2787 2787 MS2 17/20 Linfeng_122411_rIgG_2.raw High SLDIFIK Unambiguous 1 1 IPI00024279.4 CID 1.0000 0.0000 1 1 143 2.24 0.00 0 3 25 2 418.25006 835.49285 0.51 34.57 3389 3389 MS2 11/12 Linfeng_122411_rIgG_2.raw High VSLLNEQFLPLIR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 177 2.12 0.00 0 51 25 2 771.45502 1541.90276 -1.49 45.96 5472 5472 MS2 14/24 Linfeng_091311_rIgG_3.raw High ALDLLNNK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 348 2.09 0.00 0 20 25 2 450.76151 900.51573 0.87 27.09 2415 2415 MS2 12/14 Linfeng_122411_rIgG_2.raw High NGEWYEVLK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 305 2.07 0.00 0 17 25 2 569.28345 1137.55962 1.83 35.21 3470 3470 MS2 14/16 Linfeng_122411_rIgG_2.raw High VFSLLQK Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 148 2.06 0.00 0 27 25 2 417.75879 834.51030 2.28 30.71 2894 2894 MS2 11/12 Linfeng_122411_rIgG_2.raw High LALPQSDASLLSR Unambiguous 2 1 IPI00024279.4 CID 1.0000 0.0000 1 1 336 2.03 0.00 0 33 25 2 685.88660 1370.76592 1.49 33.25 3221 3221 MS2 15/24 Linfeng_122411_rIgG_2.raw IPI00607550.3 U3 small nucleolar RNA-associated protein 14 homolog A isoform 2 18.92 4 9 9 15 20.13 11.54 6 6 15.41 11.54 5 5 10.82 5.15 3 4 719 82.0 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SELSQDAEPAGSQETK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 121 4.62 0.00 0 7 25 2 838.88324 1676.75920 -1.10 20.11 2074 2074 MS2 24/30 Linfeng_091311_rIgG_3.raw High VSEFNVSSEGSGEK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 116 3.75 0.00 0 21 25 2 728.33197 1455.65666 -2.20 23.85 2591 2591 MS2 23/26 Linfeng_091311_rIgG_3.raw High TPLEQEIFNLLHK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 331 3.72 0.00 0 32 25 3 527.96051 1581.86698 2.15 44.41 4628 4628 MS2 31/48 Linfeng_122411_rIgG_3.raw High NKQPVTDPLLTPVEK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 229 3.37 0.00 1 39 25 3 560.31848 1678.94089 2.02 25.79 2214 2214 MS2 27/56 Linfeng_122411_rIgG_3.raw High NKQPVTDPLLTPVEK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 275 3.24 0.00 1 26 25 3 560.31598 1678.93338 -2.45 28.58 3243 3243 MS2 28/56 Linfeng_091311_rIgG_3.raw High DSGSQEVLSELR Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 496 3.23 0.00 0 25 100 2 660.32813 1319.64897 3.91 35.87 3192 3192 MS2 18/22 Linfeng_20120130_CHD1_3.raw High LLEAISSLDGK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 529 3.04 0.00 0 17 100 2 573.32581 1145.64433 2.66 40.17 4012 4012 MS2 15/20 Linfeng_20120130_CHD1_3.raw High TIQTPIGSTWNTQR Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 412 3.01 0.00 0 34 25 2 801.91425 1602.82121 -1.43 31.42 3622 3622 MS2 20/26 Linfeng_091311_rIgG_3.raw Medium ASSEGTIPQVQREEPAPEEEEPLLLQRPER Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 233 2.96 0.00 1 5 25 4 854.43567 3414.72085 2.08 31.20 2928 2928 MS2 37/174 Linfeng_122411_rIgG_3.raw High TPLEQEIFNLLHK Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 358 2.80 0.00 0 28 25 3 527.95880 1581.86185 -1.09 45.09 5363 5363 MS2 23/48 Linfeng_091311_rIgG_3.raw High TIQTPIGSTWNTQR Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 417 2.74 0.00 0 23 25 2 801.91766 1602.82805 2.84 30.13 2789 2789 MS2 19/26 Linfeng_122411_rIgG_3.raw High LVLADLLEPVK Unambiguous 3 1 IPI00607550.3 CID 1.0000 0.0000 1 1 57 2.72 0.00 0 24 25 2 605.37543 1209.74358 -1.48 44.27 5260 5260 MS2 17/20 Linfeng_091311_rIgG_3.raw High LLEAISSLDGK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 463 2.63 0.00 0 15 25 2 573.32562 1145.64397 2.34 32.70 3123 3123 MS2 18/20 Linfeng_122411_rIgG_3.raw High LLEAISSLDGK Unambiguous 2 1 IPI00607550.3 CID 1.0000 0.0000 1 1 548 2.39 0.00 0 6 100 2 573.32581 1145.64433 2.66 40.03 3989 3989 MS2 15/20 Linfeng_20120130_CHD1_3.raw High TIQTPIGSTWNTQR Unambiguous 4 1 IPI00607550.3 CID 1.0000 0.0000 1 1 627 2.16 0.00 0 59 100 2 801.91937 1602.83147 4.97 35.63 3138 3138 MS2 11/26 Linfeng_20120130_CHD1_3.raw IPI00020194.1 Isoform Short of TATA-binding protein-associated factor 2N 18.85 2 4 6 17 7.13 10.02 3 3 43.40 17.32 5 14 589 61.5 8.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 35 5.28 0.00 0 0 25 3 1208.20679 3622.60581 3.22 44.71 4782 4782 MS2 37/132 Linfeng_122411_rIgG_4.raw High TDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFK Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 35 4.95 0.00 0 4 25 4 906.40729 3622.60732 3.64 44.80 4793 4793 MS2 46/198 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 183 3.24 0.00 0 0 25 2 710.83551 1420.66374 3.24 20.89 1743 1743 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 182 3.18 0.00 0 1 25 2 710.83557 1420.66387 3.33 19.87 1633 1633 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 165 3.10 0.00 0 5 24 2 710.83167 1420.65605 -2.17 4.72 556 556 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 181 2.92 0.00 0 0 25 2 710.83557 1420.66387 3.33 16.81 1369 1369 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 186 2.87 0.00 0 1 25 2 710.83521 1420.66313 2.81 17.83 1453 1453 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 176 2.87 0.00 0 4 25 2 710.83508 1420.66289 2.64 18.85 1540 1540 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 192 2.82 0.00 0 13 25 2 710.83563 1420.66399 3.41 15.81 1287 1287 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 195 2.78 0.00 0 0 25 2 710.83545 1420.66362 3.15 14.80 1212 1212 MS2 17/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 185 2.69 0.00 0 27 25 2 710.83527 1420.66326 2.90 25.14 2327 2327 MS2 19/26 Linfeng_122411_rIgG_6.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 162 2.65 0.00 0 0 25 2 710.82874 1420.65019 -6.30 26.57 2961 2961 MS2 20/26 Linfeng_091311_rIgG_4.raw High SGGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 41 2.35 0.00 0 4 25 2 413.17969 825.35210 4.22 2.96 283 283 MS2 15/16 Linfeng_122411_rIgG_4.raw High SSGGGYSGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 42 2.34 0.00 0 6 25 2 471.70120 942.39513 4.17 3.04 296 296 MS2 17/18 Linfeng_122411_rIgG_4.raw High AAIDWFDGK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 249 2.33 0.00 0 17 25 2 511.74945 1022.49162 -2.55 36.49 4273 4273 MS2 13/16 Linfeng_091311_rIgG_4.raw High SGGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 32 2.15 0.00 0 13 25 2 413.17734 825.34740 -1.47 2.65 234 234 MS2 14/16 Linfeng_091311_rIgG_4.raw High SGGYGGDR Unambiguous 2 1 IPI00020194.1 CID 1.0000 0.0000 1 1 50 2.02 0.00 0 0 25 2 384.66888 768.33049 4.36 2.90 275 275 MS2 12/14 Linfeng_122411_rIgG_4.raw IPI00376379.4 "keratin, type II cytoskeletal 1b" 18.69 1 6 9 106 106.79 11.59 5 35 225.97 12.46 7 71 578 61.9 5.99 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 4.27 0.00 0 19 25 2 738.39435 1475.78142 -2.64 27.78 2860 2860 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 449 3.95 0.00 0 52 25 2 738.39508 1475.78288 -1.65 28.11 3178 3178 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 460 3.93 0.00 0 23 25 3 492.60004 1475.78556 0.16 4.69 531 531 MS2 28/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.92 0.00 0 2 25 3 492.60153 1475.79004 3.20 21.60 1745 1745 MS2 28/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 494 3.86 0.00 0 2 25 2 738.39453 1475.78179 -2.40 27.65 3153 3153 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 447 3.84 0.00 0 5 25 2 738.39520 1475.78313 -1.49 27.80 3068 3068 MS2 20/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.84 0.00 0 5 25 3 492.60147 1475.78986 3.08 19.57 1553 1553 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.80 0.00 0 0 25 2 738.39807 1475.78887 2.40 24.93 2240 2240 MS2 20/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 404 3.79 0.00 0 1 25 2 738.39758 1475.78789 1.74 4.63 522 522 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.79 0.00 0 6 25 2 738.39978 1475.79228 4.72 18.50 1433 1433 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.74 0.00 0 2 25 2 738.39404 1475.78081 -3.06 27.72 3217 3217 MS2 20/22 Linfeng_091311_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.72 0.00 0 4 25 2 738.39478 1475.78227 -2.06 27.85 3107 3107 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.72 0.00 0 2 12 2 738.39502 1475.78276 -1.73 27.90 3112 3112 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.70 0.00 0 2 1 2 738.39526 1475.78325 -1.40 3.85 399 399 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 398 3.69 0.00 0 5 25 2 738.39832 1475.78935 2.73 26.65 2329 2329 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.69 0.00 0 3 25 2 738.39844 1475.78960 2.90 23.55 1929 1929 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 480 3.68 0.00 0 2 1 3 492.59909 1475.78272 -1.76 4.44 529 529 MS2 27/44 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.67 0.00 0 3 19 2 738.39941 1475.79155 4.22 21.46 1731 1731 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 425 3.65 0.00 0 3 25 3 492.60150 1475.78995 3.14 20.59 1644 1644 MS2 27/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 375 3.65 0.00 0 0 25 2 738.39929 1475.79131 4.06 14.39 1155 1155 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 395 3.64 0.00 0 0 25 2 738.39746 1475.78765 1.57 4.76 542 542 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.63 0.00 0 1 6 2 738.39575 1475.78423 -0.74 4.11 423 423 MS2 20/22 Linfeng_122411_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.61 0.00 0 3 25 2 738.39856 1475.78984 3.06 22.46 1837 1837 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.61 0.00 0 4 25 3 492.60059 1475.78720 1.28 26.47 2504 2504 MS2 27/44 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 376 3.60 0.00 0 3 25 2 738.39905 1475.79082 3.73 18.44 1450 1450 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 410 3.59 0.00 0 5 25 3 492.60117 1475.78894 2.45 22.61 1851 1851 MS2 26/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.59 0.00 0 3 25 2 738.39801 1475.78874 2.32 26.44 2501 2501 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 445 3.58 0.00 0 4 13 2 738.39526 1475.78325 -1.40 27.60 3109 3109 MS2 20/22 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 477 3.57 0.00 0 3 4 2 738.39471 1475.78215 -2.15 27.94 3138 3138 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 428 3.57 0.00 0 7 15 3 492.59805 1475.77961 -3.87 27.75 3166 3166 MS2 26/44 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.56 0.00 0 4 19 2 738.39935 1475.79143 4.14 22.55 1816 1816 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.56 0.00 0 5 25 2 738.39868 1475.79009 3.23 26.55 2180 2180 MS2 20/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.56 0.00 0 2 25 2 738.39960 1475.79192 4.47 20.52 1609 1609 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.56 0.00 0 2 25 2 738.39905 1475.79082 3.73 17.43 1372 1372 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 406 3.56 0.00 0 17 25 2 738.39856 1475.78984 3.06 26.68 2043 2043 MS2 20/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 379 3.55 0.00 0 1 25 2 738.39899 1475.79070 3.64 16.41 1292 1292 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 393 3.54 0.00 0 2 25 2 738.39862 1475.78996 3.15 19.45 1541 1541 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 3.52 0.00 0 1 8 2 738.39423 1475.78118 -2.81 27.88 3175 3175 MS2 20/22 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 374 3.52 0.00 0 3 17 2 738.39905 1475.79082 3.73 20.45 1631 1631 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 394 3.50 0.00 0 2 25 2 738.39825 1475.78923 2.65 26.70 2362 2362 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 3.49 0.00 0 1 1 2 738.39453 1475.78179 -2.40 4.38 519 519 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 3.49 0.00 0 2 25 3 492.60107 1475.78867 2.27 21.31 1681 1681 MS2 27/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 526 3.49 0.00 0 15 25 3 492.59885 1475.78199 -2.26 27.90 3082 3082 MS2 28/44 Linfeng_091311_rIgG_5.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 367 3.49 0.00 0 0 25 2 738.39923 1475.79119 3.97 19.51 1515 1515 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 442 3.48 0.00 0 4 25 3 492.59857 1475.78116 -2.82 27.71 3123 3123 MS2 27/44 Linfeng_091311_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.48 0.00 0 3 25 2 738.39923 1475.79119 3.97 21.53 1705 1705 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 482 3.47 0.00 0 8 25 3 492.59900 1475.78244 -1.95 27.73 3120 3120 MS2 27/44 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 439 3.45 0.00 0 21 25 2 738.39539 1475.78349 -1.24 27.63 3106 3106 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 373 3.44 0.00 0 0 25 2 738.39941 1475.79155 4.22 15.40 1223 1223 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 444 3.43 0.00 0 3 5 2 738.39575 1475.78423 -0.74 3.85 380 380 MS2 20/22 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 3.33 0.00 0 3 11 3 492.59821 1475.78006 -3.56 27.84 2868 2868 MS2 28/44 Linfeng_091311_rIgG_1.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 3.31 0.00 0 6 25 3 492.59860 1475.78125 -2.76 27.96 3142 3142 MS2 27/44 Linfeng_091311_rIgG_6.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 386 3.29 0.00 0 0 25 2 738.39911 1475.79094 3.81 17.49 1354 1354 MS2 17/22 Linfeng_122411_rIgG_3.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 500 3.28 0.00 0 6 25 2 658.85822 1316.70915 2.63 45.22 4738 4738 MS2 19/22 Linfeng_122411_rIgG_2.raw High STSGFcQGGGVGGFGGGR Unambiguous 1 1 IPI00376379.4 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 66 3.27 0.00 0 8 25 2 822.86499 1644.72270 2.60 25.44 2193 2193 MS2 21/34 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 424 3.26 0.00 0 7 25 3 492.59808 1475.77970 -3.81 27.94 3183 3183 MS2 28/44 Linfeng_091311_rIgG_8.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 400 3.26 0.00 0 3 25 3 492.60181 1475.79087 3.76 18.56 1459 1459 MS2 27/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 3.25 0.00 0 0 25 2 738.39954 1475.79180 4.39 16.48 1283 1283 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 384 3.23 0.00 0 0 25 2 738.39905 1475.79082 3.73 13.38 1088 1088 MS2 19/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 392 3.23 0.00 0 48 25 2 738.39948 1475.79167 4.30 12.38 1021 1021 MS2 18/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 3.21 0.00 0 1 25 3 492.60135 1475.78949 2.83 22.33 1791 1791 MS2 29/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.18 0.00 0 26 25 2 738.39764 1475.78801 1.82 26.73 2482 2482 MS2 17/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 397 3.16 0.00 0 3 25 3 492.60205 1475.79160 4.25 17.55 1382 1382 MS2 24/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 423 3.12 0.00 0 0 25 3 492.60208 1475.79169 4.32 15.52 1233 1233 MS2 23/44 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 443 3.09 0.00 0 27 25 3 492.59869 1475.78153 -2.57 27.93 3116 3116 MS2 27/44 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 391 3.08 0.00 0 13 25 2 738.39355 1475.77983 -3.72 33.21 3900 3900 MS2 19/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 383 3.06 0.00 0 13 25 2 738.39874 1475.79021 3.31 26.73 1910 1910 MS2 17/22 Linfeng_122411_rIgG_1.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 507 3.04 0.00 0 14 25 2 658.85522 1316.70317 -1.91 46.48 5500 5500 MS2 18/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 3.03 0.00 0 3 25 3 492.60172 1475.79059 3.57 16.54 1301 1301 MS2 22/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 508 3.00 0.00 0 4 25 2 658.85529 1316.70329 -1.82 46.25 5579 5579 MS2 18/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 413 3.00 0.00 0 0 25 3 492.60229 1475.79233 4.75 14.51 1165 1165 MS2 23/44 Linfeng_122411_rIgG_2.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 543 2.94 0.00 0 20 25 2 658.85797 1316.70867 2.26 45.17 4600 4600 MS2 19/22 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 434 2.92 0.00 0 12 25 3 492.60077 1475.78775 1.65 24.95 2243 2243 MS2 29/44 Linfeng_122411_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 427 2.91 0.00 0 6 25 3 492.60156 1475.79013 3.26 20.31 1588 1588 MS2 24/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 377 2.87 0.00 0 0 25 2 738.39899 1475.79070 3.64 26.68 2117 2117 MS2 17/22 Linfeng_122411_rIgG_9.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 403 2.85 0.00 0 0 25 2 738.39868 1475.79009 3.23 23.51 1950 1950 MS2 17/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 399 2.71 0.00 0 32 25 3 492.60165 1475.79041 3.45 19.29 1497 1497 MS2 20/44 Linfeng_122411_rIgG_3.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 483 2.71 0.00 0 19 3 3 492.59894 1475.78226 -2.07 3.88 405 405 MS2 29/44 Linfeng_122411_rIgG_10.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 411 2.66 0.00 0 7 25 3 492.60114 1475.78885 2.39 23.35 1903 1903 MS2 25/44 Linfeng_122411_rIgG_3.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 609 2.64 0.00 0 33 25 2 658.85590 1316.70452 -0.89 46.30 5512 5512 MS2 18/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 432 2.63 0.00 0 26 25 3 492.60132 1475.78940 2.76 26.66 2041 2041 MS2 17/44 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 441 2.58 0.00 0 14 25 3 492.59845 1475.78080 -3.07 27.95 3120 3120 MS2 27/44 Linfeng_091311_rIgG_9.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 570 2.54 0.00 0 43 25 2 658.85797 1316.70867 2.26 45.33 4342 4342 MS2 16/22 Linfeng_122411_rIgG_7.raw High FLEQQNQVLQTK Unambiguous 3 3 IPI00220327.4;IPI00021304.1;IPI00376379.4 CID 1.0000 0.0000 1 1 485 2.52 0.00 0 7 13 3 492.59930 1475.78336 -1.33 3.86 382 382 MS2 26/44 Linfeng_122411_rIgG_9.raw High TGSENDFVVLK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 396 2.52 0.00 0 12 25 2 604.81250 1208.61772 1.59 27.99 2370 2370 MS2 15/20 Linfeng_122411_rIgG_10.raw High VYSTSSSAGSGGGSPAVGSVcYAR Unambiguous 1 1 IPI00376379.4 C21(Carbamidomethyl) CID 1.0000 0.0000 1 1 150 2.50 0.00 0 16 25 3 755.35028 2264.03629 5.04 48.66 5811 5811 MS2 21/92 Linfeng_091311_rIgG_4.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 503 2.46 0.00 0 28 25 2 658.85516 1316.70305 -2.01 46.15 5319 5319 MS2 18/22 Linfeng_091311_rIgG_1.raw High SLDLDSIIDAVR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 597 2.39 0.00 0 38 25 2 658.85577 1316.70427 -1.08 46.44 5503 5503 MS2 18/22 Linfeng_091311_rIgG_6.raw High SKDEAEALYQTK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 237 2.33 0.00 1 17 25 2 691.84161 1382.67595 -2.82 21.66 2315 2315 MS2 15/22 Linfeng_091311_rIgG_2.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 389 2.32 0.00 0 56 25 2 589.81323 1178.61919 2.32 24.43 2174 2174 MS2 14/18 Linfeng_122411_rIgG_4.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High SKDEAEALYQTK Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 1 16 25 2 691.84210 1382.67693 -2.11 20.49 1867 1867 MS2 14/22 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 394 2.11 0.00 0 41 25 2 589.81329 1178.61931 2.43 20.13 1599 1599 MS2 15/18 Linfeng_122411_rIgG_2.raw High YQELQITAGR Unambiguous 1 1 IPI00376379.4 CID 1.0000 0.0000 1 1 378 2.10 0.00 0 17 25 2 589.81293 1178.61858 1.80 26.19 2466 2466 MS2 15/18 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00646144.3 ATPase family AAA domain-containing protein 3A isoform 3 18.54 15 11 11 16 12.05 9.86 5 5 34.86 18.54 11 11 507 57.9 9.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LKEYEAAVEQLKSEQIR Unambiguous 5 1 IPI00646144.3 CID 1.0000 0.0000 1 1 309 4.35 0.00 2 18 25 4 509.27795 2034.08999 1.62 30.12 2932 2932 MS2 37/96 Linfeng_122411_rIgG_4.raw High QRYEDQLKQQQLLNEENLR Unambiguous 10 1 IPI00646144.3 CID 1.0000 0.0000 1 1 354 3.77 0.00 2 4 25 4 612.06897 2445.25405 2.41 27.56 2592 2592 MS2 38/108 Linfeng_122411_rIgG_4.raw High LKLAQFDYGR Unambiguous 11 1 IPI00646144.3 CID 1.0000 0.0000 1 1 335 3.40 0.00 1 15 25 3 404.22482 1210.65992 1.64 28.84 2763 2763 MS2 21/36 Linfeng_122411_rIgG_4.raw High YEDQLKQQQLLNEENLR Unambiguous 10 1 IPI00646144.3 CID 1.0000 0.0000 1 1 390 3.33 0.00 1 7 25 3 721.03406 2161.08762 -0.39 28.75 2752 2752 MS2 30/64 Linfeng_122411_rIgG_4.raw High ISEDLRATLNAFLYR Unambiguous 6 1 IPI00646144.3 CID 1.0000 0.0000 1 1 331 3.31 0.00 1 9 25 3 594.65833 1781.96042 3.31 43.17 4586 4586 MS2 28/56 Linfeng_122411_rIgG_4.raw High GLLLFVDEADAFLR Unambiguous 6 1 IPI00646144.3 CID 1.0000 0.0000 1 1 338 3.28 0.00 0 25 25 2 789.93365 1578.86003 4.64 51.50 5600 5600 MS2 20/26 Linfeng_122411_rIgG_4.raw High TAGTLFGEGFR Unambiguous 12 1 IPI00646144.3 CID 1.0000 0.0000 1 1 288 3.24 0.00 0 12 25 2 578.29456 1155.58183 2.14 33.02 3308 3308 MS2 19/20 Linfeng_122411_rIgG_4.raw High GLLLFVDEADAFLR Unambiguous 6 1 IPI00646144.3 CID 1.0000 0.0000 1 1 321 3.16 0.00 0 29 25 2 789.93085 1578.85442 1.08 53.08 6330 6330 MS2 21/26 Linfeng_091311_rIgG_4.raw High LKEYEAAVEQLK Unambiguous 5 1 IPI00646144.3 CID 1.0000 0.0000 1 1 391 3.11 0.00 1 43 25 3 474.26208 1420.77170 2.41 25.77 2354 2354 MS2 28/44 Linfeng_122411_rIgG_4.raw High TAGTLFGEGFR Unambiguous 12 1 IPI00646144.3 CID 1.0000 0.0000 1 1 298 2.44 0.00 0 25 25 2 578.29175 1155.57622 -2.72 34.40 4003 4003 MS2 18/20 Linfeng_091311_rIgG_4.raw High ATLNAFLYR Unambiguous 6 1 IPI00646144.3 CID 1.0000 0.0000 1 1 318 2.39 0.00 0 22 25 2 534.79657 1068.58586 2.03 33.54 3374 3374 MS2 14/16 Linfeng_122411_rIgG_4.raw High ITVLEALR Unambiguous 9 1 IPI00646144.3 CID 1.0000 0.0000 1 1 190 2.35 0.00 0 11 22 2 457.78760 914.56792 1.01 33.74 3400 3400 MS2 13/14 Linfeng_122411_rIgG_4.raw High LAQFDYGR Unambiguous 11 1 IPI00646144.3 CID 1.0000 0.0000 1 1 237 2.34 0.00 0 30 25 2 485.24442 969.48155 2.75 23.13 1999 1999 MS2 13/14 Linfeng_122411_rIgG_4.raw High ITVLEALR Unambiguous 9 1 IPI00646144.3 CID 1.0000 0.0000 1 1 405 2.26 0.00 0 0 25 2 457.78397 914.56066 -6.93 35.11 4094 4094 MS2 13/14 Linfeng_091311_rIgG_4.raw High ATLNAFLYR Unambiguous 6 1 IPI00646144.3 CID 1.0000 0.0000 1 1 288 2.18 0.00 0 10 25 2 534.79413 1068.58098 -2.54 34.92 4070 4070 MS2 14/16 Linfeng_091311_rIgG_4.raw High LAQFDYGR Unambiguous 11 1 IPI00646144.3 CID 1.0000 0.0000 1 1 212 2.01 0.00 0 25 25 2 485.24164 969.47600 -2.98 26.99 3018 3018 MS2 13/14 Linfeng_091311_rIgG_4.raw IPI00894365.2 "cDNA FLJ52842, highly similar to Actin, cytoplasmic 1" 18.52 8 5 5 22 27.83 13.96 4 11 32.31 12.54 3 11 0.00 351 39.2 5.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 301 3.77 0.00 0 16 25 2 895.95135 1790.89543 1.92 37.35 3904 3904 MS2 25/30 Linfeng_122411_rIgG_6.raw High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 348 3.22 0.00 0 21 25 3 597.63654 1790.89505 1.71 37.38 3907 3907 MS2 32/60 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 272 3.16 0.00 0 27 20 3 652.02527 1954.06125 -1.66 30.19 3059 3059 MS2 28/68 Linfeng_122411_rIgG_5.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 249 3.11 0.00 0 3 3 3 652.02698 1954.06638 0.96 0.11 16 16 MS2 31/68 Linfeng_122411_rIgG_1.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 246 3.09 0.00 0 8 25 3 652.02728 1954.06729 1.43 30.66 3059 3059 MS2 28/68 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 247 3.08 0.00 0 10 25 3 652.02698 1954.06638 0.96 30.43 2764 2764 MS2 27/68 Linfeng_122411_rIgG_8.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 174 2.90 0.00 0 6 25 2 566.76563 1132.52397 -2.64 23.43 2091 2091 MS2 16/18 Linfeng_122411_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 270 2.90 0.00 0 3 25 3 652.02521 1954.06107 -1.76 32.01 3677 3677 MS2 26/68 Linfeng_091311_rIgG_6.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 255 2.84 0.00 0 13 25 3 652.02808 1954.06968 2.65 29.79 2526 2526 MS2 25/68 Linfeng_122411_rIgG_9.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 138 2.79 0.00 0 45 25 2 566.76434 1132.52141 -4.90 25.63 2775 2775 MS2 16/18 Linfeng_091311_rIgG_5.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 128 2.72 0.00 0 42 25 2 488.72656 976.44585 -2.56 20.89 2184 2184 MS2 16/18 Linfeng_091311_rIgG_6.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 141 2.62 0.00 0 23 25 2 566.76379 1132.52031 -5.87 25.65 2870 2870 MS2 16/18 Linfeng_091311_rIgG_8.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 85 2.61 0.00 0 16 25 2 599.76367 1198.52007 -1.85 19.15 1942 1942 MS2 16/20 Linfeng_091311_rIgG_6.raw High SYELPDGQVITIGNER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 307 2.60 0.00 0 5 8 2 895.94989 1790.89250 0.29 0.78 112 112 MS2 18/30 Linfeng_122411_rIgG_1.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 283 2.58 0.00 0 12 25 3 652.02423 1954.05814 -3.26 31.89 3789 3789 MS2 30/68 Linfeng_091311_rIgG_10.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 141 2.55 0.00 0 40 25 2 488.72684 976.44640 -2.00 20.73 2236 2236 MS2 16/18 Linfeng_091311_rIgG_10.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 135 2.54 0.00 0 31 25 2 566.76324 1132.51921 -6.84 25.41 2895 2895 MS2 16/18 Linfeng_091311_rIgG_10.raw High VAPEEHPVLLTEAPLNPK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 259 2.52 0.00 0 6 25 3 652.02771 1954.06858 2.09 29.78 2613 2613 MS2 28/68 Linfeng_122411_rIgG_10.raw High AGFAGDDAPR Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 122 2.20 0.00 0 60 25 2 488.72614 976.44499 -3.44 20.87 2137 2137 MS2 14/18 Linfeng_091311_rIgG_9.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 84 2.18 0.00 0 16 25 2 599.76270 1198.51811 -3.48 19.21 1901 1901 MS2 13/20 Linfeng_091311_rIgG_9.raw High DSYVGDEAQSK Unambiguous 8 1 IPI00894365.2 CID 1.0000 0.0000 1 1 77 2.16 0.00 0 28 25 2 599.76263 1198.51799 -3.58 19.19 1977 1977 MS2 14/20 Linfeng_091311_rIgG_8.raw High GYSFTTTAER Unambiguous 5 1 IPI00894365.2 CID 1.0000 0.0000 1 1 180 2.03 0.00 0 9 10 2 566.76569 1132.52410 -2.53 3.30 295 295 MS2 15/18 Linfeng_122411_rIgG_9.raw IPI00940685.1 U5 small nuclear ribonucleoprotein 40 kDa protein 18.21 2 4 4 7 11.47 18.21 4 4 8.58 15.41 3 3 357 39.3 8.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LPGHAGSINEVAFHPDEPIIISASSDKR Unambiguous 1 1 IPI00940685.1 CID 1.0000 0.0000 1 1 288 3.78 0.00 1 12 22 5 592.30609 2957.50135 -3.50 32.74 3773 3773 MS2 65/216 Linfeng_091311_rIgG_6.raw High LPGHAGSINEVAFHPDEPIIISASSDKR Unambiguous 1 1 IPI00940685.1 CID 1.0000 0.0000 1 1 294 3.68 0.00 1 19 25 5 592.30878 2957.51478 1.04 32.04 3238 3238 MS2 51/216 Linfeng_122411_rIgG_6.raw High GPQLVcTGSDDGTVK Unambiguous 2 1 IPI00940685.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.73 0.00 0 6 25 2 767.36255 1533.71782 -2.35 24.55 2681 2681 MS2 20/28 Linfeng_091311_rIgG_6.raw High TVAVWDSETGER Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 187 2.49 0.00 0 12 25 2 675.31830 1349.62932 -2.91 28.41 3202 3202 MS2 17/22 Linfeng_091311_rIgG_6.raw High FVYVWDTTSR Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 254 2.47 0.00 0 26 25 2 637.31250 1273.61772 -2.73 36.16 4213 4213 MS2 16/18 Linfeng_091311_rIgG_6.raw High GPQLVcTGSDDGTVK Unambiguous 2 1 IPI00940685.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 229 2.45 0.00 0 24 25 2 767.36682 1533.72637 3.22 20.82 1759 1759 MS2 17/28 Linfeng_122411_rIgG_6.raw High TVAVWDSETGER Unambiguous 2 1 IPI00940685.1 CID 1.0000 0.0000 1 1 213 2.44 0.00 0 9 25 2 675.32141 1349.63555 1.70 26.93 2566 2566 MS2 17/22 Linfeng_122411_rIgG_6.raw IPI00006196.3 Isoform 2 of Nuclear mitotic apparatus protein 1 18.09 4 28 28 35 26.28 5.43 8 9 93.43 14.95 23 26 2101 236.4 5.80 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FVLDHEDGLNLNEDLENFLQK Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 293 6.03 0.00 0 3 25 3 834.74622 2502.22409 3.71 45.50 4774 4774 MS2 31/80 Linfeng_122411_rIgG_2.raw High EKQAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 367 5.36 0.00 1 1 25 3 795.08380 2383.23685 1.82 27.87 2519 2519 MS2 39/80 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 275 5.09 0.00 0 3 25 2 1097.04053 2193.07378 3.05 47.03 4969 4969 MS2 29/40 Linfeng_122411_rIgG_2.raw High LTAQVASLTSELTTLNATIQQQDQELAGLKQQAK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 110 4.94 0.00 1 2 25 4 910.99304 3640.95034 3.01 46.51 4902 4902 MS2 48/198 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 350 4.73 0.00 0 5 25 3 731.69623 2193.07413 3.21 46.92 4955 4955 MS2 34/80 Linfeng_122411_rIgG_2.raw High SQAPLESSLDSLGDVFLDSGR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 320 4.72 0.00 0 22 25 3 731.69299 2193.06443 -1.22 47.78 5528 5528 MS2 31/80 Linfeng_091311_rIgG_1.raw High QAQLAQTLQQQEQASQGLR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 377 4.46 0.00 0 9 25 3 709.37134 2126.09946 2.12 30.11 2817 2817 MS2 37/72 Linfeng_122411_rIgG_2.raw High AGDRQPEWLEEQQGR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 207 4.31 0.00 1 12 24 3 600.28638 1798.84458 -1.23 4.08 440 440 MS2 31/56 Linfeng_122411_rIgG_2.raw High AAKLEILQQQLQVANEAR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 181 4.17 0.00 1 18 25 3 675.04974 2023.13468 2.53 32.95 3183 3183 MS2 35/68 Linfeng_122411_rIgG_2.raw High LTAQVASLTSELTTLNATIQQQDQELAGLK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 154 4.10 0.00 0 5 25 3 1062.57178 3185.70078 3.35 49.95 5336 5336 MS2 27/116 Linfeng_122411_rIgG_2.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 383 3.81 0.00 0 16 25 2 901.98175 1802.95622 3.72 48.83 5196 5196 MS2 24/30 Linfeng_122411_rIgG_2.raw High KLDVEEPDSANSSFYSTR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 174 3.79 0.00 1 12 25 3 682.32172 2044.95060 2.31 26.01 2269 2269 MS2 30/68 Linfeng_122411_rIgG_2.raw High SNRDELELELAENR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 360 3.76 0.00 1 21 25 3 563.28137 1687.82956 2.91 28.37 2587 2587 MS2 33/52 Linfeng_122411_rIgG_2.raw High EKEHASGSGAQSEAAGR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 182 3.71 0.00 1 5 25 3 557.92755 1671.76810 -0.06 0.19 25 25 MS2 25/64 Linfeng_091311_rIgG_1.raw High LTAQVASLTSELTTLNATIQQQDQELAGLKQQAK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 114 3.49 0.00 1 13 25 5 728.99542 3640.94801 2.37 46.49 4900 4900 MS2 48/264 Linfeng_122411_rIgG_2.raw High IATTTASAATAAAIGATPR Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 442 3.35 0.00 0 17 25 3 572.64862 1715.93131 1.50 28.56 2612 2612 MS2 30/72 Linfeng_122411_rIgG_2.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 428 3.13 0.00 0 42 25 3 601.65674 1802.95566 3.41 48.86 5200 5200 MS2 30/60 Linfeng_122411_rIgG_2.raw High TTQIINITMTK Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 369 3.08 0.00 0 12 25 2 632.35345 1263.69963 1.49 30.93 2924 2924 MS2 16/20 Linfeng_122411_rIgG_2.raw High AQELGHSQSALASAQR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 352 2.97 0.00 0 11 21 3 551.94623 1653.82413 -3.79 2.03 262 262 MS2 23/60 Linfeng_091311_rIgG_1.raw High INQLSEENGDLSFK Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 317 2.90 0.00 0 20 25 2 797.39374 1593.78020 2.91 29.58 2746 2746 MS2 19/26 Linfeng_122411_rIgG_2.raw High LADDLSTLQEK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 512 2.83 0.00 0 54 25 2 616.82300 1232.63872 1.45 25.29 2173 2173 MS2 16/20 Linfeng_122411_rIgG_2.raw High VLEGSELELAK Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 593 2.80 0.00 0 18 25 2 594.33044 1187.65361 1.47 28.04 2542 2542 MS2 18/20 Linfeng_122411_rIgG_2.raw High DAALKQLEALEK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 487 2.78 0.00 1 15 12 3 443.58527 1328.74125 -0.63 4.67 499 499 MS2 24/44 Linfeng_122411_rIgG_9.raw High QELTSQAERAEELGQELK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 379 2.74 0.00 1 22 25 3 687.01471 2059.02958 -0.35 30.92 2923 2923 MS2 24/68 Linfeng_122411_rIgG_2.raw High NSLISSLEEEVSILNR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 417 2.73 0.00 0 9 25 3 601.65485 1802.94999 0.26 49.63 5766 5766 MS2 30/60 Linfeng_091311_rIgG_1.raw High HREELEQSK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 299 2.72 0.00 1 35 25 3 385.86246 1155.57282 -2.17 0.04 6 6 MS2 17/32 Linfeng_091311_rIgG_1.raw High IDRLALLNEK Unambiguous 4 1 IPI00006196.3 CID 1.0000 0.0000 1 1 273 2.65 0.00 1 12 25 3 395.57224 1184.70215 1.98 26.47 2331 2331 MS2 21/36 Linfeng_122411_rIgG_2.raw High DAALKQLEALEKEK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 395 2.52 0.00 2 31 25 3 529.29852 1585.88102 0.86 30.57 2876 2876 MS2 23/52 Linfeng_122411_rIgG_2.raw High IHGTEEGQQILK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 348 2.51 0.00 0 46 25 3 451.57578 1352.71277 -3.06 20.08 1811 1811 MS2 25/44 Linfeng_091311_rIgG_1.raw High LDFVcSFLQK Unambiguous 4 1 IPI00006196.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 337 2.46 0.00 0 24 25 2 628.82269 1256.63811 2.93 40.02 4077 4077 MS2 15/18 Linfeng_122411_rIgG_2.raw High LADDLSTLQEK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 454 2.42 0.00 0 42 25 2 616.81958 1232.63188 -4.10 28.63 2975 2975 MS2 16/20 Linfeng_091311_rIgG_1.raw High LLQAETASNSAR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 491 2.34 0.00 0 12 25 2 630.82880 1260.65032 -3.17 2.51 332 332 MS2 19/22 Linfeng_091311_rIgG_1.raw High IHGTEEGQQILK Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 306 2.16 0.00 0 52 25 2 676.86041 1352.71355 -2.49 20.19 1826 1826 MS2 15/22 Linfeng_091311_rIgG_1.raw High ELGELIPLR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 152 2.09 0.00 0 9 25 2 520.31042 1039.61357 -1.07 36.02 3571 3571 MS2 15/16 Linfeng_122411_rIgG_2.raw High YVQELAAVR Unambiguous 3 1 IPI00006196.3 CID 1.0000 0.0000 1 1 384 2.06 0.00 0 10 15 2 524.79175 1048.57622 -2.28 4.20 459 459 MS2 14/16 Linfeng_122411_rIgG_2.raw IPI00398625.5 Hornerin 17.68 1 12 12 31 91.14 17.58 11 28 12.54 4.46 3 3 2850 282.2 10.04 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 27 5.48 0.00 0 9 25 3 783.66064 2348.96738 -3.81 24.14 2627 2627 MS2 38/92 Linfeng_091311_rIgG_4.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 27 4.91 0.00 0 8 25 3 783.66125 2348.96921 -3.03 24.03 2352 2352 MS2 37/92 Linfeng_091311_rIgG_1.raw High GEQHGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 61 4.75 0.00 0 7 100 3 708.29980 2122.88486 3.73 11.90 778 778 MS2 33/84 Linfeng_20120130_CHD1_1.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 55 4.51 0.00 0 1 25 3 603.59045 1808.75681 1.39 2.51 207 207 MS2 32/72 Linfeng_091311_rIgG_6.raw High HGSGSGQSSSYSPYGSGSGWSSSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 89 4.33 0.00 0 5 100 3 783.66650 2348.98496 3.67 21.67 1440 1440 MS2 31/92 Linfeng_20120130_CHD1_1.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 4.30 0.00 0 9 25 4 620.01038 2477.01967 -0.54 14.88 1350 1350 MS2 39/150 Linfeng_091311_rIgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 4.17 0.00 0 1 25 4 620.01062 2477.02065 -0.14 14.54 1286 1286 MS2 43/150 Linfeng_091311_rIgG_3.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 53 4.03 0.00 0 12 25 3 603.58990 1808.75516 0.48 2.49 204 204 MS2 34/72 Linfeng_091311_rIgG_2.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 52 3.73 0.00 0 2 25 3 603.59027 1808.75626 1.08 2.32 190 190 MS2 34/72 Linfeng_091311_rIgG_3.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 3.72 0.00 0 2 25 4 620.01038 2477.01967 -0.54 14.61 1285 1285 MS2 39/150 Linfeng_091311_rIgG_4.raw High HGAGSGQSLSHGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 267 3.69 0.00 0 14 25 3 417.53748 1250.59787 -0.52 2.63 225 225 MS2 27/48 Linfeng_091311_rIgG_6.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 46 3.59 0.00 0 38 25 3 603.58905 1808.75260 -0.94 2.11 164 164 MS2 32/72 Linfeng_091311_rIgG_5.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 86 3.46 0.00 0 12 100 3 603.59174 1808.76065 3.51 11.76 768 768 MS2 31/72 Linfeng_20120130_CHD1_1.raw High SEQHGSSSGLSSSYGQHGSGSHQSSGHGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 40 3.43 0.00 0 13 25 6 479.04327 2869.22326 0.11 13.61 1181 1181 MS2 56/280 Linfeng_091311_rIgG_6.raw High HGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 55 3.41 0.00 0 15 25 3 603.59003 1808.75553 0.68 2.28 189 189 MS2 35/72 Linfeng_091311_rIgG_4.raw High QSLGHGQHGSGSGQSPSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 149 3.36 0.00 0 4 25 3 649.97076 1947.89774 -2.01 13.07 1107 1107 MS2 25/76 Linfeng_091311_rIgG_6.raw High HGSGSGHSSSYGQHGSGSGWSSSSGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 3.22 0.00 0 5 25 4 620.01062 2477.02065 -0.14 14.90 1298 1298 MS2 39/150 Linfeng_091311_rIgG_5.raw Medium SEQHGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 2.85 0.00 0 31 25 4 538.97705 2152.88637 -0.53 3.37 322 322 MS2 29/126 Linfeng_091311_rIgG_2.raw Medium SEQHGSSSGSSSSYGQHGSGSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 21 2.83 0.00 0 22 25 4 538.97778 2152.88930 0.83 3.77 339 339 MS2 31/126 Linfeng_091311_rIgG_6.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 148 2.79 0.00 0 29 25 3 528.90894 1584.71225 -1.74 15.49 1399 1399 MS2 17/60 Linfeng_091311_rIgG_7.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 113 2.76 0.00 0 6 25 2 698.31519 1395.62309 -1.22 13.96 1230 1230 MS2 19/26 Linfeng_091311_rIgG_6.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 111 2.71 0.00 0 29 25 2 698.31543 1395.62358 -0.87 13.70 1196 1196 MS2 18/26 Linfeng_091311_rIgG_2.raw High GPYESGSGHSSGLGHR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 153 2.69 0.00 0 19 25 3 528.90942 1584.71372 -0.82 15.11 1367 1367 MS2 24/60 Linfeng_091311_rIgG_3.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 130 2.69 0.00 0 25 25 2 698.31628 1395.62529 0.36 13.01 1077 1077 MS2 18/26 Linfeng_091311_rIgG_4.raw High QSLGHGQHGSGSGQSPSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 151 2.64 0.00 0 26 25 3 649.97119 1947.89902 -1.36 0.96 99 99 MS2 26/76 Linfeng_091311_rIgG_1.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 122 2.57 0.00 0 12 25 2 570.25732 1139.50737 -0.23 14.89 1351 1351 MS2 17/22 Linfeng_091311_rIgG_6.raw High YGQQGSGSGQSPSR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 123 2.47 0.00 0 9 25 2 698.31531 1395.62334 -1.04 13.38 1167 1167 MS2 16/26 Linfeng_091311_rIgG_8.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 115 2.46 0.00 0 18 25 2 570.25726 1139.50725 -0.33 14.28 1239 1239 MS2 16/22 Linfeng_091311_rIgG_4.raw High GSGSSQSSGYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 45 2.06 0.00 0 31 25 2 565.24689 1129.48650 -0.35 11.68 948 948 MS2 12/22 Linfeng_091311_rIgG_6.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 103 2.03 0.00 0 8 25 2 570.25763 1139.50798 0.31 14.79 1281 1281 MS2 13/22 Linfeng_091311_rIgG_9.raw High GSGSGQSPSYGR Unambiguous 1 1 IPI00398625.5 CID 1.0000 0.0000 1 1 116 2.02 0.00 0 23 25 2 570.25732 1139.50737 -0.23 14.11 1225 1225 MS2 13/22 Linfeng_091311_rIgG_3.raw IPI00219420.3 Structural maintenance of chromosomes protein 3 17.58 1 17 17 32 18.24 5.83 6 6 35.18 9.61 9 11 43.08 6.98 6 15 1217 141.5 7.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KGDVEGSQSQDEGEGSGESER Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 13 4.78 0.00 1 20 25 3 722.97113 2166.89884 -1.40 14.59 1322 1322 MS2 38/80 Linfeng_091311_rIgG_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 565 4.43 0.00 0 17 100 2 928.95856 1856.90984 3.93 39.07 3998 3998 MS2 20/28 Linfeng_20120130_CHD1_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 571 4.29 0.00 0 12 100 2 928.95868 1856.91008 4.07 39.03 3989 3989 MS2 19/28 Linfeng_20120130_CHD1_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 565 4.21 0.00 0 22 100 2 928.95874 1856.91020 4.13 38.99 3981 3981 MS2 19/28 Linfeng_20120130_CHD1_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 335 4.15 0.00 0 24 25 3 619.64014 1856.90586 1.79 32.90 3148 3148 MS2 31/56 Linfeng_122411_rIgG_3.raw High NYLWREENAEQQALAAK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 358 4.14 0.00 1 34 25 3 678.67358 2034.00620 1.08 30.29 2810 2810 MS2 35/64 Linfeng_122411_rIgG_3.raw High NLEQYNKLDQDLNEVK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 400 4.14 0.00 1 8 23 3 654.99817 1962.97995 1.62 30.77 2872 2872 MS2 35/60 Linfeng_122411_rIgG_3.raw High GSGSQSSVPSVDQFTGVGIR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 469 4.04 0.00 0 10 100 2 982.99103 1964.97478 3.81 40.82 4382 4382 MS2 20/38 Linfeng_20120130_CHD1_2.raw High LHTLEEEKEELAQYQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 366 3.63 0.00 1 14 25 3 663.33850 1988.00095 1.90 27.57 2450 2450 MS2 27/60 Linfeng_122411_rIgG_3.raw High KLEQcNTELKK Unambiguous 1 1 IPI00219420.3 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 3.51 0.00 2 31 25 3 464.24875 1390.73169 -3.05 14.57 1318 1318 MS2 23/40 Linfeng_091311_rIgG_2.raw High ALEYTIYNQELNETR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 312 3.25 0.00 0 16 25 2 928.95721 1856.90715 2.49 32.92 3151 3151 MS2 19/28 Linfeng_122411_rIgG_3.raw High LHTLEEEKEELAQYQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 372 3.19 0.00 1 13 25 4 497.75571 1988.00100 1.92 27.52 2445 2445 MS2 31/90 Linfeng_122411_rIgG_3.raw High KYEAIQLTFK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 336 3.07 0.00 1 17 25 3 414.23639 1240.69461 0.78 29.44 2696 2696 MS2 26/36 Linfeng_122411_rIgG_3.raw High ALDQFVNFSEQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 532 3.02 0.00 0 21 100 2 713.35693 1425.70659 3.97 41.85 4623 4623 MS2 15/22 Linfeng_20120130_CHD1_2.raw High VDALNDEIR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 324 3.01 0.00 0 44 25 2 522.76569 1044.52410 -7.64 25.97 2922 2922 MS2 14/16 Linfeng_091311_rIgG_2.raw High DLQDELAGNSEQR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 179 2.84 0.00 0 23 25 3 492.23196 1474.68134 3.00 27.43 2433 2433 MS2 25/48 Linfeng_122411_rIgG_3.raw High DTAYPETNDAIPMISK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 392 2.66 0.00 0 43 100 2 883.42334 1765.83940 4.55 38.22 3822 3822 MS2 11/30 Linfeng_20120130_CHD1_2.raw High DTAYPETNDAIPMISK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 444 2.64 0.00 0 61 100 2 883.42291 1765.83855 4.06 38.09 3794 3794 MS2 11/30 Linfeng_20120130_CHD1_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 390 2.60 0.00 0 29 25 2 625.82422 1250.64116 2.86 26.02 2244 2244 MS2 15/18 Linfeng_122411_rIgG_3.raw High DTAYPETNDAIPmISK Unambiguous 1 1 IPI00219420.3 M13(Oxidation) CID 1.0000 0.0000 1 1 358 2.53 0.00 0 4 100 2 891.42072 1781.83415 4.42 32.62 2691 2691 MS2 11/30 Linfeng_20120130_CHD1_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 355 2.50 0.00 0 16 25 2 625.82050 1250.63371 -3.09 28.61 3283 3283 MS2 15/18 Linfeng_091311_rIgG_2.raw High EENAEQQALAAK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 238 2.36 0.00 0 10 25 2 651.31744 1301.62761 -4.33 21.90 2349 2349 MS2 18/22 Linfeng_091311_rIgG_2.raw High ELGSLPQEAFEK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 591 2.32 0.00 0 41 100 2 674.34534 1347.68340 3.16 37.38 3644 3644 MS2 12/22 Linfeng_20120130_CHD1_2.raw High DTAYPETNDAIPmISK Unambiguous 1 1 IPI00219420.3 M13(Oxidation) CID 1.0000 0.0000 1 1 374 2.23 0.00 0 7 100 2 891.41864 1781.83000 2.09 32.95 2754 2754 MS2 10/30 Linfeng_20120130_CHD1_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 557 2.20 0.00 0 34 100 2 625.82477 1250.64226 3.74 28.71 2073 2073 MS2 12/18 Linfeng_20120130_CHD1_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 557 2.17 0.00 0 24 100 2 625.82434 1250.64141 3.06 28.76 2078 2078 MS2 12/18 Linfeng_20120130_CHD1_2.raw High ELGSLPQEAFEK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 521 2.16 0.00 0 18 100 2 674.34564 1347.68401 3.61 37.03 3568 3568 MS2 15/22 Linfeng_20120130_CHD1_2.raw High ELGSLPQEAFEK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 395 2.14 0.00 0 12 25 2 674.34418 1347.68108 1.44 31.30 2941 2941 MS2 18/22 Linfeng_122411_rIgG_3.raw High ELGSLPQEAFEK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 582 2.10 0.00 0 11 100 2 674.34589 1347.68450 3.97 37.15 3593 3593 MS2 14/22 Linfeng_20120130_CHD1_2.raw High VETYLNENLR Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 574 2.09 0.00 0 15 100 2 625.82471 1250.64214 3.64 28.84 2086 2086 MS2 13/18 Linfeng_20120130_CHD1_2.raw High LAQATQER Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 612 2.07 0.00 0 29 25 2 458.74493 916.48259 -2.31 12.72 1058 1058 MS2 13/14 Linfeng_091311_rIgG_2.raw High NFSEVFQK Unambiguous 1 1 IPI00219420.3 CID 1.0000 0.0000 1 1 242 2.04 0.00 0 9 25 2 499.75189 998.49651 2.30 27.71 2469 2469 MS2 13/14 Linfeng_122411_rIgG_3.raw IPI00925702.1 "cDNA FLJ59523, highly similar to Scaffold attachment factor B" 17.51 4 3 10 37 32.61 16.03 8 9 32.60 13.07 6 8 82.49 14.30 7 20 811 91.0 7.24 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 7.74 0.00 1 1 25 4 889.91260 3556.62856 2.42 31.92 3021 3021 MS2 64/192 Linfeng_122411_rIgG_3.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 6.66 0.00 1 10 25 4 889.90790 3556.60976 -2.86 32.78 3843 3843 MS2 55/192 Linfeng_091311_rIgG_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 350 5.81 0.00 1 2 100 3 950.11304 2848.32456 4.39 35.30 3188 3188 MS2 43/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 349 5.63 0.00 1 4 100 3 950.11249 2848.32291 3.81 35.48 3227 3227 MS2 38/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 157 5.57 0.00 1 1 12 3 950.10638 2848.30460 -2.62 30.75 3573 3573 MS2 42/100 Linfeng_091311_rIgG_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 360 5.54 0.00 1 2 100 3 950.11359 2848.32621 4.97 35.10 3148 3148 MS2 40/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 350 5.40 0.00 1 4 100 3 950.11304 2848.32456 4.39 34.88 3111 3111 MS2 38/100 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 226 4.97 0.00 0 3 100 4 857.89056 3428.54043 4.50 42.02 4660 4660 MS2 43/186 Linfeng_20120130_CHD1_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 220 4.76 0.00 0 0 100 2 1058.98364 2116.96001 3.88 29.57 2190 2190 MS2 23/38 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 275 4.60 0.00 1 14 100 4 889.91467 3556.63686 4.75 42.08 4675 4675 MS2 42/192 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 245 4.58 0.00 0 15 100 4 857.89197 3428.54604 6.14 42.13 4687 4687 MS2 42/186 Linfeng_20120130_CHD1_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 220 4.46 0.00 0 5 100 2 1058.98315 2116.95903 3.42 29.52 2181 2181 MS2 20/38 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 285 4.36 0.00 1 15 100 4 889.91339 3556.63173 3.31 42.19 4702 4702 MS2 44/192 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 80 4.26 0.00 0 0 17 4 857.88892 3428.53383 2.58 33.39 3212 3212 MS2 48/186 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 62 4.18 0.00 0 2 25 4 857.88373 3428.51308 -3.47 34.27 3994 3994 MS2 47/186 Linfeng_091311_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 226 4.13 0.00 0 12 100 4 857.89056 3428.54043 4.50 41.88 4628 4628 MS2 39/186 Linfeng_20120130_CHD1_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 130 4.05 0.00 0 0 25 2 1058.98328 2116.95928 3.54 27.49 2441 2441 MS2 21/38 Linfeng_122411_rIgG_3.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 152 4.05 0.00 0 7 25 3 706.32434 2116.95847 3.15 27.44 2434 2434 MS2 35/76 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 227 3.97 0.00 0 16 100 4 857.89063 3428.54067 4.58 41.81 4612 4612 MS2 43/186 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 400 3.57 0.00 1 12 100 3 578.94580 1734.82285 4.14 34.23 2988 2988 MS2 23/56 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 3.53 0.00 1 13 100 3 578.94592 1734.82322 4.35 34.36 3015 3015 MS2 24/56 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 3.48 0.00 1 10 100 3 578.94574 1734.82267 4.03 34.31 3004 3004 MS2 27/56 Linfeng_20120130_CHD1_2.raw High AIEDEGGNPDEIEITSEGNK Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 120 3.46 0.00 0 18 25 3 706.32013 2116.94583 -2.81 29.23 3367 3367 MS2 32/76 Linfeng_091311_rIgG_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.41 0.00 1 4 25 3 578.94489 1734.82010 2.55 28.32 2549 2549 MS2 29/56 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 3.27 0.00 1 18 25 3 578.94171 1734.81058 -2.94 29.69 3430 3430 MS2 27/56 Linfeng_091311_rIgG_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 3.11 0.00 1 16 100 3 578.94489 1734.82010 2.55 34.58 3054 3054 MS2 23/56 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.06 0.00 1 3 25 5 712.13104 3556.62611 1.73 32.02 3034 3034 MS2 51/256 Linfeng_122411_rIgG_3.raw High NFWVSGLSSTTR Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 321 3.04 0.00 0 7 25 2 677.84222 1354.67717 1.57 34.69 3377 3377 MS2 18/22 Linfeng_122411_rIgG_3.raw Medium SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 162 2.99 0.00 2 14 25 4 744.85962 2976.41665 3.23 27.45 2436 2436 MS2 32/156 Linfeng_122411_rIgG_3.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 699 2.87 0.00 0 26 100 2 581.31482 1161.62236 3.37 43.03 4902 4902 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 634 2.85 0.00 0 23 100 2 581.31451 1161.62175 2.85 42.34 4738 4738 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NFWVSGLSSTTR Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 483 2.66 0.00 0 39 100 2 677.84338 1354.67949 3.28 44.45 5253 5253 MS2 16/22 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 219 2.53 0.00 1 10 25 3 578.94226 1734.81223 -1.99 29.73 3398 3398 MS2 21/56 Linfeng_091311_rIgG_3.raw Medium SKDQDDQKPGPSER Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 193 2.47 0.00 1 16 25 3 529.58466 1586.73941 -0.74 3.43 329 329 MS2 22/52 Linfeng_091311_rIgG_2.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 434 2.26 0.00 0 11 14 2 581.31024 1161.61321 -4.51 35.31 4175 4175 MS2 16/18 Linfeng_091311_rIgG_2.raw High REPAEQPGDGER Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 2.21 0.00 1 16 25 2 670.81232 1340.61736 -1.23 13.33 1143 1143 MS2 16/22 Linfeng_091311_rIgG_2.raw High NFWVSGLSSTTR Unambiguous 4 1 IPI00925702.1 CID 1.0000 0.0000 1 1 466 2.19 0.00 0 51 100 2 677.84314 1354.67900 2.92 44.81 5341 5341 MS2 14/22 Linfeng_20120130_CHD1_2.raw IPI00651653.1 Isoform 3 of Probable ATP-dependent RNA helicase DDX17 17.48 7 5 10 24 15.51 11.04 6 6 17.19 10.28 6 6 36.97 7.52 4 12 652 72.5 8.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 547 4.04 0.00 0 38 100 2 846.41833 1691.82939 3.44 38.84 4444 4444 MS2 16/28 Linfeng_20120130_CHD1_4.raw High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 508 3.57 0.00 0 43 100 2 846.41980 1691.83232 5.17 38.89 4454 4454 MS2 16/28 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 234 3.50 0.00 0 12 100 2 613.86096 1226.71465 3.48 36.37 3978 3978 MS2 18/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 232 3.48 0.00 0 20 100 2 613.86133 1226.71538 4.07 36.27 3958 3958 MS2 16/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 228 3.42 0.00 0 11 100 2 613.86115 1226.71501 3.78 36.43 3991 3991 MS2 18/22 Linfeng_20120130_CHD1_4.raw High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 303 3.41 0.00 0 7 25 2 846.41803 1691.82878 3.08 32.96 3300 3300 MS2 22/28 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 231 3.32 0.00 0 14 100 2 613.86163 1226.71599 4.57 36.74 4055 4055 MS2 19/22 Linfeng_20120130_CHD1_4.raw High GTAYTFFTPGNLK Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 376 3.31 0.00 0 15 25 2 708.86188 1416.71648 0.45 35.95 3679 3679 MS2 18/24 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 201 3.21 0.00 0 20 100 2 613.86133 1226.71538 4.07 36.82 4071 4071 MS2 18/22 Linfeng_20120130_CHD1_4.raw High SSQSSSQQFSGIGR Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 169 3.11 0.00 0 4 25 2 728.34302 1455.67876 -2.44 23.39 2521 2521 MS2 20/26 Linfeng_091311_rIgG_4.raw High ELAQQVQQVADDYGK Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 480 3.01 0.00 0 60 100 2 846.41937 1691.83147 4.67 39.08 4496 4496 MS2 14/28 Linfeng_20120130_CHD1_4.raw High SGKAPILIATDVASR Unambiguous 7 1 IPI00651653.1 CID 1.0000 0.0000 1 1 303 2.83 0.00 1 34 25 3 500.29199 1498.86142 1.72 27.92 2639 2639 MS2 26/56 Linfeng_122411_rIgG_4.raw High STcIYGGAPK Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 2.80 0.00 0 10 25 2 527.25403 1053.50078 -2.48 21.34 2235 2235 MS2 16/18 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 186 2.74 0.00 0 6 25 2 613.85974 1226.71221 1.49 30.62 2996 2996 MS2 19/22 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 2.72 0.00 0 25 25 2 684.86682 1368.72637 -3.00 37.48 4399 4399 MS2 18/24 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 227 2.65 0.00 0 30 100 2 613.86133 1226.71538 4.07 36.17 3939 3939 MS2 16/22 Linfeng_20120130_CHD1_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.51 0.00 0 31 25 2 684.86975 1368.73223 1.28 36.28 3721 3721 MS2 18/24 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 167 2.50 0.00 0 9 22 2 613.85651 1226.70574 -3.79 32.24 3723 3723 MS2 18/22 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 221 2.42 0.00 0 54 100 2 613.86066 1226.71404 2.98 37.13 4133 4133 MS2 15/22 Linfeng_20120130_CHD1_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.40 0.00 0 24 25 2 586.80963 1172.61199 2.30 28.86 2766 2766 MS2 16/20 Linfeng_122411_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.33 0.00 0 38 25 2 586.80688 1172.60649 -2.38 30.52 3497 3497 MS2 17/20 Linfeng_091311_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 492 2.20 0.00 0 27 100 2 586.81042 1172.61357 3.66 32.73 3200 3200 MS2 14/20 Linfeng_20120130_CHD1_4.raw High mLDmGFEPQIR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 M1(Oxidation); M4(Oxidation) CID 1.0000 0.0000 1 1 363 2.15 0.00 0 51 100 2 684.82056 1368.63384 3.74 33.45 3363 3363 MS2 15/20 Linfeng_20120130_CHD1_4.raw High VLEEANQAINPK Unambiguous 6 1 IPI00651653.1 CID 1.0000 0.0000 1 1 323 2.05 0.00 0 9 25 2 663.35443 1325.70159 -3.35 24.18 2632 2632 MS2 18/22 Linfeng_091311_rIgG_4.raw IPI00294229.6 RNA 3'-terminal phosphate cyclase-like protein 17.43 1 5 5 5 0.00 14.44 17.43 5 5 373 40.8 9.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DDNPGLRDFEASFIR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 283 3.41 0.00 1 26 25 3 584.61810 1751.83976 2.81 39.09 4121 4121 MS2 31/56 Linfeng_122411_rIgG_6.raw High GVTNDQVDPSVDVLK Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 380 3.21 0.00 0 0 25 2 793.40881 1585.81035 2.19 29.88 2956 2956 MS2 23/28 Linfeng_122411_rIgG_6.raw High VLLGPLSPYTIEFLR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 103 3.14 0.00 0 33 25 2 859.50067 1717.99407 3.07 47.26 5146 5146 MS2 18/28 Linfeng_122411_rIgG_6.raw High LLLEEIYR Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 244 2.57 0.00 0 6 25 2 524.80646 1048.60564 1.79 36.27 3769 3769 MS2 13/14 Linfeng_122411_rIgG_6.raw High LVLSTLSGRPVK Unambiguous 1 1 IPI00294229.6 CID 1.0000 0.0000 1 1 113 2.10 0.00 0 7 25 2 635.39874 1269.79021 0.98 26.32 2484 2484 MS2 13/22 Linfeng_122411_rIgG_6.raw IPI00154590.6 MKI67 FHA domain-interacting nucleolar phosphoprotein 17.41 2 4 4 4 12.01 17.41 4 4 0.00 293 34.2 9.88 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IVAETMNNYLFGER Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 249 3.55 0.00 0 13 25 2 828.90332 1656.79936 -3.46 37.96 4429 4429 MS2 15/26 Linfeng_091311_rIgG_7.raw High GYAFVEFESEDVAK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 131 3.08 0.00 0 31 25 2 795.86548 1590.72368 -5.42 37.03 4312 4312 MS2 21/26 Linfeng_091311_rIgG_7.raw High GIDYDFPSLILQK Unambiguous 2 1 IPI00154590.6 CID 1.0000 0.0000 1 1 348 3.07 0.00 0 21 25 2 754.90210 1508.79692 -1.76 43.68 5151 5151 MS2 20/24 Linfeng_091311_rIgG_7.raw High VSGTLDTPEK Unambiguous 1 1 IPI00154590.6 CID 1.0000 0.0000 1 1 398 2.31 0.00 0 15 25 2 523.77094 1046.53459 -1.80 19.43 1950 1950 MS2 14/18 Linfeng_091311_rIgG_7.raw IPI00654555.3 NOP2 protein 17.40 3 11 11 21 33.02 17.40 11 11 8.54 4.38 3 3 19.70 7.93 5 7 845 92.8 9.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQASSSFQDSSQPAGK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 112 3.96 0.00 0 13 25 2 813.37280 1625.73833 -1.17 18.62 1863 1863 MS2 23/30 Linfeng_091311_rIgG_3.raw High NTGVILANDANAER Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 306 3.95 0.00 0 26 25 2 729.36786 1457.72844 -4.07 25.33 2798 2798 MS2 23/26 Linfeng_091311_rIgG_3.raw High GADSELSTVPSVTK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 628 3.90 0.00 0 9 100 2 695.85919 1390.71111 3.61 25.47 1637 1637 MS2 20/26 Linfeng_20120130_CHD1_3.raw High DLAIYYSYGDFLLGK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 327 3.22 0.00 0 31 25 2 869.44073 1737.87419 0.42 48.66 5811 5811 MS2 22/28 Linfeng_091311_rIgG_3.raw High GADSELSTVPSVTK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 455 3.17 0.00 0 0 25 2 695.85510 1390.70293 -2.27 4.41 491 491 MS2 22/26 Linfeng_122411_rIgG_3.raw High GADSELSTVPSVTK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 448 3.03 0.00 0 4 25 2 695.85516 1390.70305 -2.18 27.16 3048 3048 MS2 21/26 Linfeng_091311_rIgG_3.raw High GISAGAVQTAGK Unambiguous 2 1 IPI00654555.3 CID 1.0000 0.0000 1 1 575 3.02 0.00 0 19 25 2 530.29205 1059.57683 -2.39 20.03 2063 2063 MS2 20/22 Linfeng_091311_rIgG_3.raw High VLLDAPcSGTGVISK Unambiguous 3 1 IPI00654555.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 533 2.99 0.00 0 18 100 2 758.90924 1516.81120 4.73 33.44 2706 2706 MS2 16/28 Linfeng_20120130_CHD1_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 477 2.99 0.00 0 14 23 3 515.93945 1545.80381 1.15 29.59 2717 2717 MS2 24/52 Linfeng_122411_rIgG_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 692 2.94 0.00 0 29 100 3 515.94043 1545.80674 3.04 39.58 3913 3913 MS2 20/52 Linfeng_20120130_CHD1_3.raw High VLLDAPcSGTGVISK Unambiguous 3 1 IPI00654555.3 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 423 2.91 0.00 0 17 25 2 758.90387 1516.80046 -2.36 30.57 3511 3511 MS2 22/28 Linfeng_091311_rIgG_3.raw High IQDIVGILR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 222 2.90 0.00 0 6 100 2 513.82141 1026.63555 4.76 45.11 4934 4934 MS2 14/16 Linfeng_20120130_CHD1_3.raw High GTDTQTPAVLSPSK Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 358 2.82 0.00 0 12 25 2 701.36273 1401.71819 -2.76 24.33 2658 2658 MS2 18/26 Linfeng_091311_rIgG_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 445 2.82 0.00 0 20 25 3 515.93732 1545.79740 -3.00 30.60 3515 3515 MS2 25/52 Linfeng_091311_rIgG_3.raw High LGVTNTIISHYDGR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 690 2.70 0.00 0 18 100 3 515.94031 1545.80637 2.81 39.45 3889 3889 MS2 20/52 Linfeng_20120130_CHD1_3.raw High DLAQALINR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 311 2.54 0.00 0 11 25 2 507.28909 1013.57091 -2.92 34.30 3997 3997 MS2 15/16 Linfeng_091311_rIgG_3.raw High LVPTGLDFGQEGFTR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 296 2.47 0.00 0 28 25 2 818.91779 1636.82829 -2.89 38.33 4515 4515 MS2 18/28 Linfeng_091311_rIgG_3.raw High IQDIVGILR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 207 2.38 0.00 0 12 25 2 513.81970 1026.63213 1.43 34.95 3409 3409 MS2 15/16 Linfeng_122411_rIgG_3.raw High IQDIVGILR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 158 2.27 0.00 0 17 25 2 513.81763 1026.62798 -2.61 36.07 4227 4227 MS2 15/16 Linfeng_091311_rIgG_3.raw High LVPTGLDFGQEGFTR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 531 2.16 0.00 0 42 100 2 818.92365 1636.84001 4.27 46.52 5245 5245 MS2 14/28 Linfeng_20120130_CHD1_3.raw High LVPTGLDFGQEGFTR Unambiguous 3 1 IPI00654555.3 CID 1.0000 0.0000 1 1 534 2.12 0.00 0 44 100 2 818.92322 1636.83916 3.74 46.28 5193 5193 MS2 15/28 Linfeng_20120130_CHD1_3.raw IPI00005154.1 FACT complex subunit SSRP1 17.35 1 8 8 14 24.48 13.96 6 7 13.59 8.60 4 4 8.10 4.94 3 3 709 81.0 6.87 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 310 5.56 0.00 0 8 25 3 884.10541 2650.30167 -0.74 48.35 5772 5772 MS2 35/92 Linfeng_091311_rIgG_3.raw High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 325 4.84 0.00 0 20 25 3 884.10651 2650.30497 0.50 48.65 5810 5810 MS2 35/92 Linfeng_091311_rIgG_4.raw High FGGQLLSFDIGDQPVFEIPLSNVSQcTTGK Unambiguous 1 1 IPI00005154.1 C26(Carbamidomethyl) CID 1.0000 0.0000 1 1 246 4.77 0.00 0 33 25 3 1085.53809 3254.59970 -1.31 50.91 6093 6093 MS2 41/116 Linfeng_091311_rIgG_4.raw High FYVPPTQEDGVDPVEAFAQNVLSK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 288 4.60 0.00 0 7 25 3 884.11035 2650.31650 4.85 47.13 5086 5086 MS2 36/92 Linfeng_122411_rIgG_4.raw High VDNIQAGELTEGIWR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 547 3.58 0.00 0 25 100 2 850.93726 1700.86724 4.07 47.11 6197 6197 MS2 20/28 Linfeng_20120130_CHD1_4.raw High ADVIQATGDAIcIFR Unambiguous 1 1 IPI00005154.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 3.55 0.00 0 12 25 3 550.61670 1649.83554 2.36 40.26 4219 4219 MS2 33/56 Linfeng_122411_rIgG_4.raw High ASSGLLYPLER Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 413 2.73 0.00 0 23 25 2 603.33087 1205.65447 1.62 33.13 3322 3322 MS2 16/20 Linfeng_122411_rIgG_4.raw High FDEISFVNFAR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 331 2.71 0.00 0 22 25 2 672.83484 1344.66240 3.02 40.35 4231 4231 MS2 18/20 Linfeng_122411_rIgG_4.raw High ASSGLLYPLER Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 408 2.54 0.00 0 15 25 2 603.32727 1205.64726 -4.35 34.46 4018 4018 MS2 16/20 Linfeng_091311_rIgG_3.raw High FDEISFVNFAR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 280 2.51 0.00 0 37 25 2 672.83167 1344.65605 -1.70 41.48 4911 4911 MS2 18/20 Linfeng_091311_rIgG_3.raw High ASSGLLYPLER Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 606 2.29 0.00 0 37 100 2 603.33167 1205.65605 2.94 41.23 4926 4926 MS2 15/20 Linfeng_20120130_CHD1_4.raw High ADVIQATGDAIcIFR Unambiguous 1 1 IPI00005154.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.26 0.00 0 50 25 2 825.41766 1649.82805 -2.18 41.31 4890 4890 MS2 22/28 Linfeng_091311_rIgG_3.raw High SFDFEIETK Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 335 2.22 0.00 0 22 100 2 558.26837 1115.52947 3.48 40.28 4745 4745 MS2 13/16 Linfeng_20120130_CHD1_4.raw High IPYTTVLR Unambiguous 1 1 IPI00005154.1 CID 1.0000 0.0000 1 1 190 2.01 0.00 0 50 25 2 481.78558 962.56389 -3.20 29.42 3356 3356 MS2 10/14 Linfeng_091311_rIgG_3.raw IPI00647896.1 "Tubulin, beta" 17.20 4 4 4 7 0.00 20.29 17.20 4 7 372 41.7 4.91 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GHYTEGAELVDSVLDVVR Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 417 3.52 0.00 0 8 14 3 653.66553 1958.98203 0.08 42.84 4797 4797 MS2 33/68 Linfeng_122411_rIgG_5.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 465 3.22 0.00 0 10 10 3 553.97015 1659.89591 0.37 40.77 4515 4515 MS2 29/56 Linfeng_122411_rIgG_5.raw High MAVTFIGNSTAIQELFK Unambiguous 4 1 IPI00647896.1 CID 1.0000 0.0000 1 1 396 3.06 0.00 0 47 25 3 623.99719 1869.97702 -0.52 45.51 5144 5144 MS2 37/64 Linfeng_122411_rIgG_5.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 391 2.83 0.00 0 7 25 3 553.97125 1659.89920 2.36 40.48 4294 4294 MS2 28/56 Linfeng_122411_rIgG_6.raw High NSSYFVEWIPNNVK Unambiguous 4 1 IPI00647896.1 CID 1.0000 0.0000 1 1 325 2.68 0.00 0 15 25 2 848.92224 1696.83721 2.48 39.47 4169 4169 MS2 13/26 Linfeng_122411_rIgG_6.raw High ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 317 2.52 0.00 0 15 25 2 830.45398 1659.90068 3.25 40.77 4330 4330 MS2 18/28 Linfeng_122411_rIgG_6.raw Medium ALTVPELTQQVFDAK Unambiguous 3 1 IPI00647896.1 CID 1.0000 0.0000 1 1 387 2.47 0.00 0 34 25 3 553.97125 1659.89920 2.36 40.66 3750 3750 MS2 26/56 Linfeng_122411_rIgG_7.raw IPI00018288.1 DNA-directed RNA polymerase II subunit RPB3 17.09 1 3 3 3 9.29 17.09 3 3 275 31.4 4.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SEYSELDEDESQAPYDPNGKPER Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 43 4.12 0.00 0 5 25 3 885.71503 2655.13053 -0.93 27.79 3096 3096 MS2 32/88 Linfeng_091311_rIgG_7.raw High LGLIPLISDDIVDK Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 156 2.66 0.00 0 35 25 2 755.93927 1510.87126 -1.00 46.91 5554 5554 MS2 17/26 Linfeng_091311_rIgG_7.raw High ITELTDENVK Unambiguous 1 1 IPI00018288.1 CID 1.0000 0.0000 1 1 458 2.51 0.00 0 15 25 2 581.30164 1161.59599 -3.29 23.92 2570 2570 MS2 13/18 Linfeng_091311_rIgG_7.raw IPI00470805.2 Isoform 2 of Mediator of DNA damage checkpoint protein 1 16.99 9 15 15 19 13.52 3.12 3 5 48.59 13.86 12 14 1825 197.5 5.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AHEVGAQGGPPVAQVEQDLPISR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 334 5.18 0.00 0 9 25 3 785.74249 2355.21292 3.25 32.50 3127 3127 MS2 39/88 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPELQPSTSTDQPVTSEPTSQVTR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 204 4.91 0.00 0 0 25 3 1126.23425 3376.68821 3.74 32.53 3131 3131 MS2 36/124 Linfeng_122411_rIgG_2.raw High ENLTDLVVDTDTLGESTQPQR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 292 4.81 0.00 0 8 25 3 777.71667 2331.13547 1.86 39.40 3999 3999 MS2 30/80 Linfeng_122411_rIgG_2.raw High VGLPLLSPEFLLTGVLK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 27 3.94 0.00 0 56 25 3 599.37158 1796.10019 3.85 53.98 5810 5810 MS2 28/64 Linfeng_122411_rIgG_2.raw High SQASTTVDINTQVEK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 396 3.69 0.00 0 0 25 2 810.91046 1620.81365 3.74 23.74 1976 1976 MS2 20/28 Linfeng_122411_rIgG_2.raw High GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 200 3.41 0.00 1 6 25 4 846.67621 3383.68300 3.38 28.46 2599 2599 MS2 48/198 Linfeng_122411_rIgG_2.raw High TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 217 3.36 0.00 0 0 25 3 1132.91284 3396.72397 3.22 32.46 3122 3122 MS2 27/124 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 341 3.29 0.00 0 18 25 3 875.11151 2623.31998 -1.95 27.55 2829 2829 MS2 26/96 Linfeng_091311_rIgG_1.raw High TPETVVPTAPELQISTSTDQPVTPKPTSR Unambiguous 5 1 IPI00470805.2 CID 1.0000 0.0000 1 1 206 3.07 0.00 0 1 25 3 1026.54089 3077.60813 2.57 32.32 3105 3105 MS2 27/112 Linfeng_122411_rIgG_2.raw High TPEPVVPTAPEPHPTTSTDQPVTPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 349 3.01 0.00 0 21 25 3 875.11127 2623.31925 -2.23 27.39 3117 3117 MS2 26/96 Linfeng_091311_rIgG_2.raw High TPESIVPIAPELQPSTSR Unambiguous 7 1 IPI00470805.2 CID 1.0000 0.0000 1 1 285 2.99 0.00 0 17 25 3 641.34686 1922.02604 1.57 35.30 3481 3481 MS2 27/68 Linfeng_122411_rIgG_2.raw High VGLPLLSPEFLLTGVLK Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 12 2.81 0.00 0 11 25 2 898.55481 1796.10234 5.04 53.86 5797 5797 MS2 17/32 Linfeng_122411_rIgG_2.raw High LDVSLPFVSR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 296 2.77 0.00 0 25 25 2 566.82324 1132.63921 2.71 39.25 3980 3980 MS2 15/18 Linfeng_122411_rIgG_2.raw High NFGFSLQDALSR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 337 2.62 0.00 0 7 25 2 677.84210 1354.67693 1.38 39.86 4056 4056 MS2 19/22 Linfeng_122411_rIgG_2.raw High TPETLVPTAPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 301 2.56 0.00 0 43 25 2 577.32422 1153.64116 -4.52 26.92 2741 2741 MS2 14/20 Linfeng_091311_rIgG_1.raw High TPESIVPIAPELQPSTSR Unambiguous 7 1 IPI00470805.2 CID 1.0000 0.0000 1 1 255 2.53 0.00 0 11 25 2 961.51703 1922.02678 1.96 35.35 3487 3487 MS2 18/34 Linfeng_122411_rIgG_2.raw High LEPSTSTDQPVTPEPTSQATR Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 288 2.51 0.00 0 18 25 3 748.03076 2242.07773 -2.55 24.63 2435 2435 MS2 27/80 Linfeng_091311_rIgG_1.raw High VLFTGVVDAR Unambiguous 9 1 IPI00470805.2 CID 1.0000 0.0000 1 1 329 2.50 0.00 0 22 25 2 538.80963 1076.61199 1.91 31.70 3024 3024 MS2 16/18 Linfeng_122411_rIgG_2.raw High TPETLVPTAPK Unambiguous 6 1 IPI00470805.2 CID 1.0000 0.0000 1 1 256 2.16 0.00 0 54 25 2 577.32397 1153.64067 -4.94 26.85 3042 3042 MS2 12/20 Linfeng_091311_rIgG_2.raw IPI00291939.1 Structural maintenance of chromosomes protein 1A 16.87 3 17 17 32 15.24 5.19 6 6 47.14 10.30 11 18 25.30 6.08 6 8 1233 143.1 7.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AFVSmVYSEEGAEDR Unambiguous 1 1 IPI00291939.1 M5(Oxidation) CID 1.0000 0.0000 1 1 137 4.81 0.00 0 8 100 2 853.37500 1705.74272 3.08 31.35 2474 2474 MS2 21/28 Linfeng_20120130_CHD1_2.raw High IIDETmAQLQDLK Unambiguous 1 1 IPI00291939.1 M6(Oxidation) CID 1.0000 0.0000 1 1 618 3.91 0.00 0 7 100 2 767.39886 1533.79045 4.88 32.65 2697 2697 MS2 17/24 Linfeng_20120130_CHD1_2.raw High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 375 3.85 0.00 1 3 25 3 485.26544 1453.78177 2.25 27.61 2456 2456 MS2 26/44 Linfeng_122411_rIgG_3.raw High AESLIGVYPEQGDcVISK Unambiguous 1 1 IPI00291939.1 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 473 3.74 0.00 0 8 100 2 982.98895 1964.97063 3.65 40.51 4311 4311 MS2 18/34 Linfeng_20120130_CHD1_2.raw High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 375 3.65 0.00 1 9 25 3 485.26529 1453.78131 1.94 27.65 2490 2490 MS2 24/44 Linfeng_122411_rIgG_2.raw High AFVSMVYSEEGAEDR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 206 3.59 0.00 0 45 100 2 845.38037 1689.75347 6.45 39.38 4067 4067 MS2 18/28 Linfeng_20120130_CHD1_2.raw High SKLESELANFGPR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 463 3.55 0.00 1 7 25 3 483.25681 1447.75586 1.26 31.22 2930 2930 MS2 29/48 Linfeng_122411_rIgG_3.raw High DKFQETSDEFEAAR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 65 3.48 0.00 1 29 25 3 558.25134 1672.73948 -3.30 27.38 3116 3116 MS2 29/52 Linfeng_091311_rIgG_2.raw High SNLMDAISFVLGEK Unambiguous 3 1 IPI00291939.1 CID 1.0000 0.0000 1 1 360 3.27 0.00 0 66 25 3 508.59903 1523.78254 3.31 52.44 5638 5638 MS2 27/52 Linfeng_122411_rIgG_2.raw High VLTFDLTKYPDANPNPNEQ Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 327 3.14 0.00 1 7 25 3 726.02563 2176.06235 3.02 36.67 3627 3627 MS2 23/72 Linfeng_122411_rIgG_3.raw High IEKLEEYITTSK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 394 2.81 0.00 1 46 25 3 485.26260 1453.77326 -3.61 29.25 3370 3370 MS2 21/44 Linfeng_091311_rIgG_2.raw High VLTFDLTKYPDANPNPNEQ Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 332 2.70 0.00 1 11 25 3 726.02539 2176.06162 2.69 36.75 3664 3664 MS2 24/72 Linfeng_122411_rIgG_2.raw High AATLAQELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 677 2.59 0.00 0 36 25 2 537.29657 1073.58586 1.95 25.01 2136 2136 MS2 15/18 Linfeng_122411_rIgG_2.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 413 2.54 0.00 0 8 25 2 533.28339 1065.55950 1.82 31.93 3022 3022 MS2 15/16 Linfeng_122411_rIgG_3.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 397 2.54 0.00 0 12 25 2 533.28345 1065.55962 1.94 32.02 3065 3065 MS2 15/16 Linfeng_122411_rIgG_2.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 611 2.44 0.00 0 33 100 2 531.79669 1062.58611 2.89 44.98 5382 5382 MS2 14/16 Linfeng_20120130_CHD1_2.raw High AESLIGVYPEQGDcVISK Unambiguous 1 1 IPI00291939.1 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 488 2.42 0.00 0 12 100 2 982.99042 1964.97356 5.14 40.65 4341 4341 MS2 11/34 Linfeng_20120130_CHD1_2.raw High LNEQQSVLQR Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 412 2.35 0.00 0 6 25 2 607.82520 1214.64311 -4.70 22.78 2474 2474 MS2 15/18 Linfeng_091311_rIgG_2.raw High AATLAQELEK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 637 2.32 0.00 0 45 25 2 537.29370 1073.58013 -3.40 28.33 3245 3245 MS2 14/18 Linfeng_091311_rIgG_2.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 568 2.27 0.00 0 25 100 2 533.28424 1065.56120 3.43 39.75 4149 4149 MS2 13/16 Linfeng_20120130_CHD1_2.raw High FTAIIGPNGSGK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 390 2.25 0.00 0 50 25 2 581.31805 1161.62883 2.17 24.16 2027 2027 MS2 15/22 Linfeng_122411_rIgG_2.raw High AQVQLQLFK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 254 2.22 0.00 0 23 25 2 537.81976 1074.63225 1.49 33.26 3223 3223 MS2 11/16 Linfeng_122411_rIgG_2.raw High TALFEEISR Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 393 2.22 0.00 0 29 25 2 533.28052 1065.55376 -3.56 33.30 3913 3913 MS2 15/16 Linfeng_091311_rIgG_2.raw High LIDLcQPTQK Unambiguous 2 1 IPI00291939.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 506 2.22 0.00 0 20 25 2 608.32544 1215.64360 2.77 24.28 2017 2017 MS2 13/18 Linfeng_122411_rIgG_3.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 450 2.18 0.00 0 8 25 2 531.79590 1062.58452 1.39 35.46 3473 3473 MS2 14/16 Linfeng_122411_rIgG_3.raw High AQVQLQLFK Unambiguous 2 1 IPI00291939.1 CID 1.0000 0.0000 1 1 263 2.14 0.00 0 20 25 2 537.82001 1074.63274 1.94 33.34 3205 3205 MS2 11/16 Linfeng_122411_rIgG_3.raw High DLTLEENQVK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 538 2.12 0.00 0 36 25 2 594.81104 1188.61479 3.43 21.97 1787 1787 MS2 14/18 Linfeng_122411_rIgG_2.raw High TVALDGTLFQK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 500 2.12 0.00 0 42 100 2 596.83472 1192.66216 4.10 41.08 4443 4443 MS2 13/20 Linfeng_20120130_CHD1_2.raw High DLTLEENQVK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 572 2.08 0.00 0 29 25 2 594.81146 1188.61565 4.15 22.11 1767 1767 MS2 15/18 Linfeng_122411_rIgG_3.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 404 2.06 0.00 0 0 25 2 531.79285 1062.57842 -4.35 36.62 4345 4345 MS2 14/16 Linfeng_091311_rIgG_2.raw High LGIQLDFEK Unambiguous 1 1 IPI00291939.1 CID 1.0000 0.0000 1 1 452 2.06 0.00 0 13 25 2 531.79614 1062.58501 1.85 35.45 3499 3499 MS2 14/16 Linfeng_122411_rIgG_2.raw High LIDLcQPTQK Unambiguous 2 1 IPI00291939.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 508 2.05 0.00 0 15 25 2 608.32544 1215.64360 2.77 24.01 2008 2008 MS2 13/18 Linfeng_122411_rIgG_2.raw IPI00176642.3 Serine/threonine-protein kinase 12 16.86 3 5 5 5 0.00 13.87 16.86 5 5 344 39.3 9.29 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HFTIDDFEIGRPLGK Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 425 3.10 0.00 0 13 25 3 582.30603 1744.90354 1.01 35.58 3683 3683 MS2 29/56 Linfeng_122411_rIgG_6.raw High DIKPENLLLGLK Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 104 2.87 0.00 0 11 25 3 451.61053 1352.81705 1.63 38.62 4063 4063 MS2 24/44 Linfeng_122411_rIgG_6.raw High LPLAQVSAHPWVR Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 295 2.74 0.00 0 7 25 3 491.94989 1473.83512 1.73 31.60 3182 3182 MS2 24/48 Linfeng_122411_rIgG_6.raw High FGNVYLAR Unambiguous 2 1 IPI00176642.3 CID 1.0000 0.0000 1 1 358 2.61 0.00 0 23 25 2 470.25665 939.50603 1.40 27.23 2606 2606 MS2 13/14 Linfeng_122411_rIgG_6.raw High IYLILEYAPR Unambiguous 3 1 IPI00176642.3 CID 1.0000 0.0000 1 1 201 2.54 0.00 0 14 25 2 625.86200 1250.71672 1.88 40.37 4281 4281 MS2 16/18 Linfeng_122411_rIgG_6.raw IPI00644504.2 Brix domain containing 1 16.82 3 3 3 3 9.28 16.82 3 3 0.00 214 24.6 9.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NITRPFEDQTSLEFFSK Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 308 3.93 0.00 0 11 25 3 687.00714 2059.00687 -3.07 37.67 4393 4393 MS2 37/64 Linfeng_091311_rIgG_7.raw High RTHLASDDLYK Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 466 3.19 0.00 1 20 25 3 440.22913 1318.67282 -1.67 19.92 2021 2021 MS2 22/40 Linfeng_091311_rIgG_7.raw High GPTVSNIR Unambiguous 3 1 IPI00644504.2 CID 1.0000 0.0000 1 1 394 2.16 0.00 0 18 25 2 422.23676 843.46623 -2.49 19.34 1937 1937 MS2 12/14 Linfeng_091311_rIgG_7.raw IPI00008359.1 "Keratin, type II cytoskeletal 2 oral" 16.77 2 3 14 119 108.22 7.05 6 48 68.27 9.87 9 26 130.67 10.34 6 45 638 65.8 8.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.19 0.00 0 3 19 2 570.27551 1139.54375 3.13 33.00 3259 3259 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LLRDYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M9(Oxidation) CID 1.0000 0.0000 1 1 551 3.03 0.00 1 28 100 2 769.40784 1537.80840 2.63 34.67 3638 3638 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 315 2.73 0.00 0 9 100 2 570.27649 1139.54570 4.84 32.48 2988 2988 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.65 0.00 0 13 100 2 570.27454 1139.54180 1.42 32.83 2406 2406 MS2 13/16 Linfeng_20120130_CHD1_7.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.64 0.00 0 9 100 2 570.27655 1139.54582 4.95 32.41 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.61 0.00 0 0 100 2 570.27588 1139.54448 3.77 32.93 3428 3428 MS2 13/16 Linfeng_20120130_CHD1_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.60 0.00 0 9 64 2 570.27197 1139.53667 -3.08 32.82 3422 3422 MS2 13/16 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.56 0.00 0 0 93 2 570.27167 1139.53606 -3.62 32.73 3395 3395 MS2 14/16 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 328 2.56 0.00 0 16 100 2 570.27472 1139.54216 1.74 32.90 2444 2444 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.56 0.00 0 16 100 2 570.27594 1139.54460 3.88 32.55 2676 2676 MS2 14/16 Linfeng_20120130_CHD1_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.55 0.00 0 23 99 2 570.27155 1139.53581 -3.83 32.66 3376 3376 MS2 13/16 Linfeng_20120130_CHD1_5.raw High cLDLGSIIAEVRTQYEEIAQRSK Unambiguous 1 1 IPI00008359.1 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 484 2.54 0.00 2 32 100 3 893.79871 2679.38156 1.65 1.12 178 178 MS2 15/88 Linfeng_20120130_CHD1_8.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High YEDEINKRTAAENEFVGLK Unambiguous 1 1 IPI00008359.1 CID 1.0000 0.0000 1 1 610 2.50 0.00 2 38 100 3 742.70862 2226.11130 3.37 47.32 4751 4751 MS2 18/72 Linfeng_20120130_CHD1_6.raw Medium YEDEINKRTAAENEFVGLK Unambiguous 1 1 IPI00008359.1 CID 1.0000 0.0000 1 1 587 2.50 0.00 2 6 100 3 742.70789 2226.10910 2.38 41.65 5490 5490 MS2 20/72 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 12 100 2 570.27448 1139.54167 1.31 33.07 3355 3355 MS2 12/16 Linfeng_20120130_CHD1_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 300 2.45 0.00 0 30 100 2 570.27319 1139.53911 -0.94 33.08 3490 3490 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High SMQDLVEDFK Unambiguous 1 1 IPI00008359.1 CID 1.0000 0.0000 1 1 148 2.33 0.00 0 0 25 2 606.28308 1211.55889 -2.02 32.05 2823 2823 MS2 13/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 34 100 2 570.27490 1139.54253 2.06 32.60 2546 2546 MS2 12/16 Linfeng_20120130_CHD1_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 15 100 2 570.27161 1139.53594 -3.73 32.49 3330 3330 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.22 0.00 0 17 100 2 570.27533 1139.54338 2.81 32.52 3224 3224 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 25 100 2 570.27618 1139.54509 4.31 32.40 3311 3311 MS2 12/16 Linfeng_20120130_CHD1_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High DYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M6(Oxidation) CID 1.0000 0.0000 1 1 289 2.07 0.00 0 12 100 2 578.27277 1155.53826 2.73 24.08 1615 1615 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00003886.3 Isoform 2 of Guanine nucleotide-binding protein-like 3 16.76 2 6 6 8 13.45 11.36 4 4 13.82 10.24 4 4 537 60.5 8.79 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QITIIDSPSFIVSPLNSSSALALR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 155 4.99 0.00 0 17 25 3 843.80127 2529.38926 -1.24 46.92 5590 5590 MS2 36/92 Linfeng_091311_rIgG_4.raw High VIEASDVVLEVLDAR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 333 4.07 0.00 0 15 25 3 543.30304 1627.89457 2.67 46.55 5013 5013 MS2 29/56 Linfeng_122411_rIgG_4.raw High SGFNLEELEKNNAQSIR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 360 3.88 0.00 1 37 25 3 650.32977 1948.97477 1.22 32.87 3288 3288 MS2 33/64 Linfeng_122411_rIgG_4.raw High VIEASDVVLEVLDAR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 361 3.58 0.00 0 4 25 3 543.30109 1627.88871 -0.93 47.91 5715 5715 MS2 25/56 Linfeng_091311_rIgG_4.raw High NSLEFFTVLAQR Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 357 3.50 0.00 0 12 25 3 475.59048 1424.75690 2.53 42.44 4494 4494 MS2 22/44 Linfeng_122411_rIgG_4.raw High ENLESWLNYLK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 354 2.69 0.00 0 35 25 2 704.85822 1408.70915 -1.13 45.97 5471 5471 MS2 17/20 Linfeng_091311_rIgG_4.raw High VGVIGFPNVGK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 511 2.36 0.00 0 12 25 2 543.82013 1086.63298 2.13 33.23 3335 3335 MS2 17/20 Linfeng_122411_rIgG_4.raw High VGVIGFPNVGK Unambiguous 2 1 IPI00003886.3 CID 1.0000 0.0000 1 1 427 2.20 0.00 0 31 25 2 543.81799 1086.62871 -1.81 34.64 4034 4034 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00005859.5 "Keratin, type II cytoskeletal 75" 16.70 3 2 12 155 173.58 10.71 7 72 122.63 16.52 10 45 121.04 4.36 3 38 551 59.5 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High QcSSLQTAIADAEQR Unambiguous 2 1 IPI00005859.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 3.70 0.00 0 17 25 3 559.93311 1677.78476 -0.82 32.18 2841 2841 MS2 29/56 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 427 2.99 0.00 1 10 25 3 378.52441 1133.55869 -2.92 18.05 1771 1771 MS2 25/32 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 318 2.94 0.00 0 8 7 2 583.29443 1165.58159 -2.77 3.28 292 292 MS2 17/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.88 0.00 1 12 25 3 378.52426 1133.55823 -3.32 18.35 1831 1831 MS2 24/32 Linfeng_091311_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 418 2.88 0.00 1 16 25 3 378.52451 1133.55896 -2.67 18.13 1820 1820 MS2 24/32 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High TAAENEFVALK Unambiguous 2 1 IPI00005859.5 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 12 25 2 596.81549 1192.62370 2.36 25.13 1929 1929 MS2 17/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 385 2.84 0.00 1 58 25 3 378.52420 1133.55805 -3.48 17.96 1770 1770 MS2 23/32 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 371 2.80 0.00 1 26 25 3 378.52390 1133.55713 -4.29 18.22 1761 1761 MS2 24/32 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 337 2.76 0.00 0 19 19 2 583.29456 1165.58183 -2.56 3.60 342 342 MS2 16/18 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 303 2.68 0.00 0 19 25 2 583.29565 1165.58403 -0.68 23.85 2148 2148 MS2 16/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 308 2.67 0.00 0 18 25 2 583.29358 1165.57988 -4.24 25.75 2847 2847 MS2 16/18 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 320 2.63 0.00 0 39 25 2 583.29346 1165.57964 -4.45 25.89 2810 2810 MS2 17/18 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 30 25 2 583.29260 1165.57793 -5.91 25.89 2837 2837 MS2 17/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.59 0.00 0 23 25 2 583.29218 1165.57707 -6.65 25.66 2878 2878 MS2 17/18 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.57 0.00 0 45 25 2 583.29730 1165.58733 2.15 24.66 2021 2021 MS2 17/18 Linfeng_122411_rIgG_8.raw High KLLEGEEcR Unambiguous 16 6 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00956313.1;IPI00909059.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.53 0.00 1 41 25 3 378.52414 1133.55786 -3.64 18.32 1774 1774 MS2 21/32 Linfeng_091311_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 354 2.49 0.00 0 45 25 2 583.29297 1165.57866 -5.29 25.97 2874 2874 MS2 17/18 Linfeng_091311_rIgG_6.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 133 2.37 0.00 0 30 25 2 606.78052 1212.55376 0.48 23.74 2133 2133 MS2 14/18 Linfeng_122411_rIgG_6.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 316 2.35 0.00 0 19 25 2 583.29303 1165.57878 -5.18 25.68 2845 2845 MS2 17/18 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High YEELQVTAGR Unambiguous 9 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 352 2.26 0.00 0 10 25 2 583.29285 1165.57842 -5.49 25.79 2586 2586 MS2 16/18 Linfeng_091311_rIgG_1.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 107 2.25 0.00 0 35 25 2 606.77600 1212.54473 -6.97 25.49 2856 2856 MS2 16/18 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High AEAESWYQTK Unambiguous 10 3 IPI00005859.5;IPI00956313.1;IPI00909059.5 CID 1.0000 0.0000 1 1 102 2.22 0.00 0 15 25 2 606.77612 1212.54497 -6.77 25.37 2532 2532 MS2 15/18 Linfeng_091311_rIgG_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00400922.5 Protein RRP5 homolog 16.68 1 26 26 41 39.52 7.16 11 17 49.06 10.90 16 17 21.03 4.22 6 7 1871 208.6 8.87 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DSETVDEDEEVDPALTVGTIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 338 5.40 0.00 0 0 100 2 1131.53467 2262.06206 4.96 40.01 4205 4205 MS2 24/40 Linfeng_20120130_CHD1_2.raw High SIKDYGVFIQFPSGLSGLAPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 268 4.27 0.00 1 5 25 3 742.07434 2224.20847 3.21 42.93 4445 4445 MS2 33/80 Linfeng_122411_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 229 4.23 0.00 0 36 25 3 608.67731 1824.01737 3.27 42.29 4365 4365 MS2 40/72 Linfeng_122411_rIgG_2.raw High TTEPGVTGLLLAVEGPAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 248 3.59 0.00 0 17 25 3 608.67401 1824.00748 -2.16 43.29 5203 5203 MS2 34/72 Linfeng_091311_rIgG_2.raw High TKDGLEVAVLPHNIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 246 3.52 0.00 1 14 25 4 416.23981 1661.93740 2.40 27.46 2464 2464 MS2 38/84 Linfeng_122411_rIgG_2.raw High LGPSVVGLAR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 184 3.37 0.00 0 16 100 2 484.80020 968.59313 4.47 32.65 2696 2696 MS2 16/18 Linfeng_20120130_CHD1_2.raw High IIDYSQMDELALLSLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 387 3.37 0.00 0 23 25 3 627.33447 1879.98886 2.87 46.44 4894 4894 MS2 22/60 Linfeng_122411_rIgG_2.raw High TKDGLEVAVLPHNIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 245 3.17 0.00 1 37 25 3 554.65057 1661.93717 2.26 27.50 2470 2470 MS2 30/56 Linfeng_122411_rIgG_2.raw High AIFENTLSTYPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 509 3.06 0.00 0 12 100 2 692.36395 1383.72063 3.71 39.13 4010 4010 MS2 17/22 Linfeng_20120130_CHD1_2.raw High VGQYLNcIVEK Unambiguous 1 1 IPI00400922.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 381 2.90 0.00 0 8 25 2 661.84302 1322.67876 1.07 28.92 2659 2659 MS2 16/20 Linfeng_122411_rIgG_2.raw High AIFENTLSTYPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 335 2.89 0.00 0 9 25 2 692.36194 1383.71660 0.79 31.72 3027 3027 MS2 17/22 Linfeng_122411_rIgG_2.raw High DSETVDEDEEVDPALTVGTIKK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 283 2.87 0.00 1 12 25 3 797.38928 2390.15329 3.13 30.86 2915 2915 MS2 27/84 Linfeng_122411_rIgG_2.raw High TSIIEAQYLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 293 2.80 0.00 0 12 25 2 597.33112 1193.65495 2.06 30.81 2908 2908 MS2 17/18 Linfeng_122411_rIgG_2.raw High AINIGQLVDVK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 232 2.78 0.00 0 9 25 2 585.34912 1169.69097 1.76 36.31 3608 3608 MS2 17/20 Linfeng_122411_rIgG_2.raw High VEDPEINSIQDIK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 592 2.76 0.00 0 20 100 2 750.38550 1499.76372 3.25 33.82 2914 2914 MS2 16/24 Linfeng_20120130_CHD1_2.raw High FVTSTSDHFVEGQTVAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 293 2.60 0.00 0 0 25 3 641.98151 1923.92997 -7.69 26.49 2993 2993 MS2 24/68 Linfeng_091311_rIgG_2.raw High FVTSTSDHFVEGQTVAAK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 303 2.58 0.00 0 17 25 3 641.98193 1923.93125 -7.02 26.64 2704 2704 MS2 27/68 Linfeng_091311_rIgG_1.raw High AGQEVESGQK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 253 2.54 0.00 0 11 25 2 516.75122 1032.49516 -0.50 2.87 257 257 MS2 16/18 Linfeng_091311_rIgG_2.raw High KPALVSTVEGGQDPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 384 2.52 0.00 0 41 25 3 509.27679 1525.81583 -4.13 22.25 2108 2108 MS2 22/56 Linfeng_091311_rIgG_1.raw High GRIPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 37 2.52 0.00 1 22 25 3 482.30237 1444.89255 2.68 40.38 4122 4122 MS2 24/48 Linfeng_122411_rIgG_2.raw High LGPSVVGLAR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 95 2.46 0.00 0 37 25 2 484.79868 968.59007 1.31 27.97 2533 2533 MS2 17/18 Linfeng_122411_rIgG_2.raw High WLEVEIAPDIR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 269 2.42 0.00 0 11 25 2 670.86591 1340.72453 2.67 38.91 3937 3937 MS2 17/20 Linfeng_122411_rIgG_2.raw High FYNNVQGLVPK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 373 2.34 0.00 0 15 25 2 639.84662 1278.68596 1.42 31.11 2947 2947 MS2 15/20 Linfeng_122411_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 40 2.32 0.00 0 6 25 2 616.38861 1231.76995 3.13 44.06 4590 4590 MS2 18/20 Linfeng_122411_rIgG_2.raw High LQVGQGVSLTLK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 217 2.29 0.00 0 18 100 2 621.87708 1242.74687 4.19 39.64 4124 4124 MS2 15/22 Linfeng_20120130_CHD1_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 60 2.26 0.00 0 10 25 2 616.38489 1231.76250 -2.92 45.15 5192 5192 MS2 18/20 Linfeng_091311_rIgG_1.raw High LGPSVVGLAR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 143 2.22 0.00 0 25 25 2 484.79666 968.58605 -2.84 30.13 3490 3490 MS2 15/18 Linfeng_091311_rIgG_2.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 173 2.21 0.00 0 15 25 2 613.79004 1226.57280 -5.93 25.87 2908 2908 MS2 15/18 Linfeng_091311_rIgG_2.raw High ATVVGPDSSK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 509 2.20 0.00 0 30 25 2 480.75220 960.49712 -2.69 16.15 1515 1515 MS2 10/18 Linfeng_091311_rIgG_3.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 170 2.20 0.00 0 23 25 2 613.79004 1226.57280 -5.93 25.85 2595 2595 MS2 15/18 Linfeng_091311_rIgG_1.raw High YGAFLLR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 299 2.18 0.00 0 15 25 2 420.24313 839.47899 1.86 32.23 3093 3093 MS2 11/12 Linfeng_122411_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 67 2.17 0.00 0 15 25 2 616.38513 1231.76299 -2.52 45.31 5459 5459 MS2 17/20 Linfeng_091311_rIgG_2.raw High VVILNVDLLK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 34 2.16 0.00 0 15 25 2 563.36462 1125.72197 -2.01 40.74 4880 4880 MS2 15/18 Linfeng_091311_rIgG_2.raw High VGQYLNcIVEK Unambiguous 1 1 IPI00400922.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 2.11 0.00 0 56 25 2 661.83997 1322.67266 -3.55 30.59 3239 3239 MS2 14/20 Linfeng_091311_rIgG_1.raw High LQVGQGVSLTLK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 222 2.10 0.00 0 37 100 2 621.87671 1242.74614 3.60 39.88 4175 4175 MS2 12/22 Linfeng_20120130_CHD1_2.raw High VGQYLNcIVEK Unambiguous 1 1 IPI00400922.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 531 2.06 0.00 0 52 100 2 661.84314 1322.67900 1.25 36.52 3455 3455 MS2 14/20 Linfeng_20120130_CHD1_2.raw High ATVVGPDSSK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 531 2.04 0.00 0 49 25 2 480.75223 960.49718 -2.63 16.40 1577 1577 MS2 12/18 Linfeng_091311_rIgG_2.raw High VVVLNcEPSK Unambiguous 1 1 IPI00400922.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 417 2.04 0.00 0 52 25 2 572.80328 1144.59929 -3.35 23.69 2603 2603 MS2 13/18 Linfeng_091311_rIgG_2.raw High IPLLLTSLSFK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 64 2.03 0.00 0 19 25 2 616.38556 1231.76384 -1.83 45.27 5385 5385 MS2 16/20 Linfeng_091311_rIgG_3.raw High FQEAGELYNR Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 166 2.03 0.00 0 34 25 2 613.79102 1226.57475 -4.33 25.79 2860 2860 MS2 15/18 Linfeng_091311_rIgG_3.raw High VTPNEGLTVSFPFGK Unambiguous 1 1 IPI00400922.5 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 16 25 2 796.92126 1592.83525 2.07 38.26 3856 3856 MS2 20/28 Linfeng_122411_rIgG_2.raw IPI00477227.3 "Isoform 1 of Keratin, type II cytoskeletal 78" 16.54 2 6 8 30 28.26 5.77 3 12 25.12 8.08 4 9 27.17 8.27 4 9 520 56.8 6.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 429 3.30 0.00 0 46 25 2 721.88214 1442.75701 3.04 44.39 4787 4787 MS2 20/22 Linfeng_122411_rIgG_6.raw High IEIDPQFQVVR Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 506 3.20 0.00 0 18 100 2 672.37280 1343.73833 4.83 42.58 5183 5183 MS2 17/20 Linfeng_20120130_CHD1_4.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 421 3.17 0.00 0 19 25 2 721.88239 1442.75749 3.38 44.34 4625 4625 MS2 20/22 Linfeng_122411_rIgG_2.raw High TLNNQFASFIDK Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 543 3.16 0.00 0 4 100 2 699.35901 1397.71074 3.38 45.81 5907 5907 MS2 16/22 Linfeng_20120130_CHD1_4.raw High IEIDPQFQVVR Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 526 3.14 0.00 0 26 100 2 672.37280 1343.73833 4.83 42.31 5129 5129 MS2 17/20 Linfeng_20120130_CHD1_4.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 745 3.11 0.00 0 27 100 2 508.27628 1015.54527 3.31 30.97 2825 2825 MS2 15/16 Linfeng_20120130_CHD1_4.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 419 3.07 0.00 0 46 25 2 721.87958 1442.75188 -0.51 45.38 5400 5400 MS2 20/22 Linfeng_091311_rIgG_3.raw High IEIDPQFQVVR Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 522 3.07 0.00 0 27 100 2 672.37268 1343.73808 4.65 42.68 5202 5202 MS2 17/20 Linfeng_20120130_CHD1_4.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 734 3.05 0.00 0 7 100 2 508.27582 1015.54436 2.41 31.99 3032 3032 MS2 15/16 Linfeng_20120130_CHD1_4.raw High TLNNQFASFIDK Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 532 3.02 0.00 0 5 100 2 699.35980 1397.71233 4.52 45.64 5871 5871 MS2 17/22 Linfeng_20120130_CHD1_4.raw High VDELEAALR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 567 2.99 0.00 0 39 25 2 508.27560 1015.54393 1.99 28.95 2663 2663 MS2 15/16 Linfeng_122411_rIgG_2.raw High TLNNQFASFIDK Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 543 2.98 0.00 0 0 100 2 699.35944 1397.71160 4.00 45.73 5889 5889 MS2 17/22 Linfeng_20120130_CHD1_4.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 414 2.93 0.00 0 18 25 2 721.88196 1442.75664 2.79 44.32 4616 4616 MS2 20/22 Linfeng_122411_rIgG_3.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 398 2.82 0.00 0 38 25 2 721.88165 1442.75603 2.36 44.46 4233 4233 MS2 19/22 Linfeng_122411_rIgG_7.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 429 2.79 0.00 0 36 25 2 721.88275 1442.75823 3.88 44.25 4723 4723 MS2 20/22 Linfeng_122411_rIgG_4.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 425 2.74 0.00 0 29 25 3 481.59009 1442.75571 2.14 44.45 4795 4795 MS2 17/44 Linfeng_122411_rIgG_6.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 409 2.71 0.00 0 43 25 2 721.87897 1442.75066 -1.36 45.60 5398 5398 MS2 20/22 Linfeng_091311_rIgG_6.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 176 2.45 0.00 0 9 25 2 503.23599 1005.46471 -2.30 20.28 2071 2071 MS2 13/14 Linfeng_091311_rIgG_7.raw High ATLENDFVVLK Unambiguous 1 1 IPI00477227.3 CID 1.0000 0.0000 1 1 548 2.45 0.00 0 34 100 2 624.84735 1248.68743 3.15 44.32 5579 5579 MS2 13/20 Linfeng_20120130_CHD1_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 201 2.41 0.00 0 17 25 2 503.23627 1005.46526 -1.76 20.17 2037 2037 MS2 13/14 Linfeng_091311_rIgG_5.raw High SLNSFGGcLEGSR Unambiguous 1 1 IPI00477227.3 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.28 0.00 0 16 25 2 692.32104 1383.63481 1.88 28.09 2519 2519 MS2 18/24 Linfeng_122411_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 173 2.21 0.00 0 11 25 2 503.23584 1005.46440 -2.61 20.00 2084 2084 MS2 13/14 Linfeng_091311_rIgG_2.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 196 2.19 0.00 0 8 25 2 503.23621 1005.46514 -1.88 19.98 2045 2045 MS2 13/14 Linfeng_091311_rIgG_4.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 180 2.17 0.00 0 27 25 2 503.23557 1005.46385 -3.15 20.22 2047 2047 MS2 13/14 Linfeng_091311_rIgG_9.raw High YLDFSSIITEVR Unambiguous 2 1 IPI00477227.3 CID 1.0000 0.0000 1 1 425 2.16 0.00 0 49 25 2 721.88000 1442.75273 0.08 45.68 5400 5400 MS2 19/22 Linfeng_091311_rIgG_7.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 213 2.13 0.00 0 36 25 2 503.23621 1005.46514 -1.88 19.93 2048 2048 MS2 13/14 Linfeng_091311_rIgG_3.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 199 2.12 0.00 0 21 25 2 503.23605 1005.46483 -2.18 20.21 2162 2162 MS2 13/14 Linfeng_091311_rIgG_10.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 200 2.11 0.00 0 24 25 2 503.23648 1005.46568 -1.33 20.23 2093 2093 MS2 13/14 Linfeng_091311_rIgG_6.raw High LLEGEEcR Unambiguous 18 7 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00477227.3;IPI00956313.1;IPI00909059.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 188 2.09 0.00 0 6 12 2 503.23737 1005.46745 0.43 3.83 399 399 MS2 13/14 Linfeng_122411_rIgG_6.raw IPI00017617.1 Probable ATP-dependent RNA helicase DDX5 16.29 3 4 9 23 18.73 12.70 7 7 12.49 8.96 5 5 31.34 8.63 5 11 614 69.1 8.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELAQQVQQVAAEYcR Unambiguous 3 1 IPI00017617.1 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 299 4.05 0.00 0 18 25 3 598.29126 1792.85923 -3.07 35.81 4187 4187 MS2 32/56 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 234 3.50 0.00 0 12 100 2 613.86096 1226.71465 3.48 36.37 3978 3978 MS2 18/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 232 3.48 0.00 0 20 100 2 613.86133 1226.71538 4.07 36.27 3958 3958 MS2 16/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 228 3.42 0.00 0 11 100 2 613.86115 1226.71501 3.78 36.43 3991 3991 MS2 18/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 231 3.32 0.00 0 14 100 2 613.86163 1226.71599 4.57 36.74 4055 4055 MS2 19/22 Linfeng_20120130_CHD1_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 201 3.21 0.00 0 20 100 2 613.86133 1226.71538 4.07 36.82 4071 4071 MS2 18/22 Linfeng_20120130_CHD1_4.raw High STcIYGGAPK Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 204 2.80 0.00 0 10 25 2 527.25403 1053.50078 -2.48 21.34 2235 2235 MS2 16/18 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 186 2.74 0.00 0 6 25 2 613.85974 1226.71221 1.49 30.62 2996 2996 MS2 19/22 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 328 2.72 0.00 0 25 25 2 684.86682 1368.72637 -3.00 37.48 4399 4399 MS2 18/24 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 227 2.65 0.00 0 30 100 2 613.86133 1226.71538 4.07 36.17 3939 3939 MS2 16/22 Linfeng_20120130_CHD1_4.raw High TTYLVLDEADR Unambiguous 3 1 IPI00017617.1 CID 1.0000 0.0000 1 1 472 2.63 0.00 0 3 100 2 648.33026 1295.65325 4.19 36.65 4035 4035 MS2 16/20 Linfeng_20120130_CHD1_4.raw High TTYLVLDEADR Unambiguous 3 1 IPI00017617.1 CID 1.0000 0.0000 1 1 304 2.51 0.00 0 33 25 2 648.32794 1295.64861 0.61 31.35 3093 3093 MS2 17/20 Linfeng_122411_rIgG_4.raw High GDGPIcLVLAPTR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 310 2.51 0.00 0 31 25 2 684.86975 1368.73223 1.28 36.28 3721 3721 MS2 18/24 Linfeng_122411_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 167 2.50 0.00 0 9 22 2 613.85651 1226.70574 -3.79 32.24 3723 3723 MS2 18/22 Linfeng_091311_rIgG_4.raw High APILIATDVASR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 CID 1.0000 0.0000 1 1 221 2.42 0.00 0 54 100 2 613.86066 1226.71404 2.98 37.13 4133 4133 MS2 15/22 Linfeng_20120130_CHD1_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 403 2.40 0.00 0 24 25 2 586.80963 1172.61199 2.30 28.86 2766 2766 MS2 16/20 Linfeng_122411_rIgG_4.raw High LLQLVEDR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 575 2.36 0.00 0 30 100 2 493.28891 985.57054 2.86 34.35 3567 3567 MS2 13/14 Linfeng_20120130_CHD1_4.raw High LLQLVEDR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 496 2.34 0.00 0 11 25 2 493.28818 985.56908 1.38 29.14 2803 2803 MS2 13/14 Linfeng_122411_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 391 2.33 0.00 0 38 25 2 586.80688 1172.60649 -2.38 30.52 3497 3497 MS2 17/20 Linfeng_091311_rIgG_4.raw High LLQLVEDR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 319 2.24 0.00 0 24 25 2 493.28629 985.56529 -2.46 30.85 3541 3541 MS2 13/14 Linfeng_091311_rIgG_4.raw High GVEIcIATPGR Unambiguous 10 2 IPI00017617.1;IPI00651653.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 492 2.20 0.00 0 27 100 2 586.81042 1172.61357 3.66 32.73 3200 3200 MS2 14/20 Linfeng_20120130_CHD1_4.raw High mLDmGFEPQIR Unambiguous 10 2 IPI00651653.1;IPI00017617.1 M1(Oxidation); M4(Oxidation) CID 1.0000 0.0000 1 1 363 2.15 0.00 0 51 100 2 684.82056 1368.63384 3.74 33.45 3363 3363 MS2 15/20 Linfeng_20120130_CHD1_4.raw High TAQEVETYR Unambiguous 2 1 IPI00017617.1 CID 1.0000 0.0000 1 1 218 2.09 0.00 0 22 25 2 548.76617 1096.52507 -1.72 19.35 1954 1954 MS2 15/16 Linfeng_091311_rIgG_4.raw IPI00017451.1 Splicing factor 3A subunit 1 16.14 2 8 8 16 17.27 7.57 4 6 14.47 10.34 5 5 16.94 5.67 3 5 793 88.8 5.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ASKPLPPAPAPDEYLVSPITGEK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 351 4.10 0.00 1 20 100 3 793.09558 2377.27219 2.99 42.06 4319 4319 MS2 29/88 Linfeng_20120130_CHD1_3.raw High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 316 4.01 0.00 0 30 25 3 887.10962 2659.31430 -1.36 50.51 6116 6116 MS2 36/92 Linfeng_091311_rIgG_2.raw High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 328 4.01 0.00 0 22 25 3 887.11249 2659.32291 1.88 50.52 6041 6041 MS2 33/92 Linfeng_091311_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 157 3.96 0.00 0 27 100 2 726.92792 1452.84856 4.43 34.92 2994 2994 MS2 20/24 Linfeng_20120130_CHD1_3.raw High EPPPEFEFIADPPSISAFDLDVVK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 330 3.92 0.00 0 21 25 3 887.11334 2659.32547 2.84 49.02 5219 5219 MS2 30/92 Linfeng_122411_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 164 3.42 0.00 0 27 100 2 726.92841 1452.84953 5.10 34.50 2916 2916 MS2 20/24 Linfeng_20120130_CHD1_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 165 3.31 0.00 0 35 100 2 726.92810 1452.84892 4.68 34.42 2899 2899 MS2 20/24 Linfeng_20120130_CHD1_3.raw High FNFLNPNDPYHAYYR Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 165 3.22 0.00 0 8 25 3 644.30127 1930.88926 1.09 35.67 3501 3501 MS2 21/56 Linfeng_122411_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 152 2.71 0.00 0 3 25 2 726.92322 1452.83916 -2.04 30.77 3537 3537 MS2 20/24 Linfeng_091311_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 155 2.69 0.00 0 23 25 2 726.92578 1452.84429 1.49 29.41 2693 2693 MS2 20/24 Linfeng_122411_rIgG_3.raw High DSNSLAYYNMANGAVIHLALK Unambiguous 2 1 IPI00017451.1 CID 1.0000 0.0000 1 1 352 2.54 0.00 0 9 25 3 755.71198 2265.12137 -5.27 40.90 3938 3938 MS2 17/80 Linfeng_122411_rIgG_9.raw Medium RTDIFGVEETAIGK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 379 2.45 0.00 1 36 25 3 512.60547 1535.80185 -3.01 33.41 3883 3883 MS2 24/52 Linfeng_091311_rIgG_3.raw High LQYEGIFIK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 379 2.15 0.00 0 14 100 2 555.81445 1110.62163 2.00 44.86 4881 4881 MS2 12/16 Linfeng_20120130_CHD1_3.raw High EVLDQVcYR Unambiguous 2 1 IPI00017451.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 249 2.11 0.00 0 36 25 2 591.28632 1181.56536 2.86 22.34 1792 1792 MS2 12/16 Linfeng_122411_rIgG_3.raw High VQAQVIQETIVPK Unambiguous 1 1 IPI00017451.1 CID 1.0000 0.0000 1 1 155 2.05 0.00 0 25 25 2 726.92267 1452.83806 -2.80 30.89 3592 3592 MS2 18/24 Linfeng_091311_rIgG_2.raw High EVLDQVcYR Unambiguous 2 1 IPI00017451.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 203 2.04 0.00 0 26 25 2 591.28363 1181.55998 -1.69 27.53 3099 3099 MS2 13/16 Linfeng_091311_rIgG_3.raw IPI00009328.4 Eukaryotic initiation factor 4A-III 16.06 1 6 6 11 10.69 8.03 3 4 0.00 18.95 8.03 3 7 411 46.8 6.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High mLVLDEADEmLNK Unambiguous 1 1 IPI00009328.4 M1(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 373 3.49 0.00 0 18 100 2 776.86694 1552.72661 2.05 34.28 3785 3785 MS2 19/24 Linfeng_20120130_CHD1_5.raw High mLVLDEADEmLNK Unambiguous 1 1 IPI00009328.4 M1(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 350 3.20 0.00 0 17 100 2 776.86536 1552.72344 0.01 33.99 3715 3715 MS2 19/24 Linfeng_20120130_CHD1_5.raw High mLVLDEADEmLNK Unambiguous 1 1 IPI00009328.4 M1(Oxidation); M10(Oxidation) CID 1.0000 0.0000 1 1 347 3.12 0.00 0 11 100 2 776.86456 1552.72185 -1.01 33.95 3704 3704 MS2 18/24 Linfeng_20120130_CHD1_5.raw High GLDVPQVSLIINYDLPNNR Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 322 2.97 0.00 0 32 25 3 714.05151 2140.13999 0.10 45.10 5322 5322 MS2 29/72 Linfeng_091311_rIgG_5.raw High DVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 363 2.88 0.00 0 9 25 2 595.80206 1190.59685 -3.66 18.37 1782 1782 MS2 19/22 Linfeng_091311_rIgG_5.raw High GRDVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 496 2.71 0.00 1 43 25 3 468.57947 1403.72385 0.03 15.79 1424 1424 MS2 24/52 Linfeng_091311_rIgG_5.raw High VLISTDVWAR Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 554 2.40 0.00 0 40 100 2 580.32813 1159.64897 1.67 42.61 5722 5722 MS2 16/18 Linfeng_20120130_CHD1_5.raw High RDELTLEGIK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 628 2.30 0.00 1 59 100 2 587.32928 1173.65129 3.28 31.87 3177 3177 MS2 11/18 Linfeng_20120130_CHD1_5.raw High RDELTLEGIK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 576 2.25 0.00 1 65 100 2 587.32880 1173.65032 2.45 31.78 3157 3157 MS2 11/18 Linfeng_20120130_CHD1_5.raw High RDELTLEGIK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 574 2.18 0.00 1 61 100 2 587.32867 1173.65007 2.24 31.69 3135 3135 MS2 15/18 Linfeng_20120130_CHD1_5.raw High DVIAQSQSGTGK Unambiguous 1 1 IPI00009328.4 CID 1.0000 0.0000 1 1 351 2.13 0.00 0 41 25 2 595.80255 1190.59783 -2.84 18.58 1862 1862 MS2 13/22 Linfeng_091311_rIgG_6.raw IPI00016610.2 Poly(rC)-binding protein 1 16.01 1 3 4 6 17.73 16.01 4 6 0.00 356 37.5 7.09 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QVTITGSAASISLAQYLINAR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 237 4.59 0.00 0 28 25 3 726.40070 2177.18753 -2.30 45.78 5421 5421 MS2 27/80 Linfeng_091311_rIgG_6.raw High QVTITGSAASISLAQYLINAR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 234 3.76 0.00 0 24 25 3 726.40173 2177.19065 -0.87 45.92 5431 5431 MS2 25/80 Linfeng_091311_rIgG_7.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 123 2.57 0.00 0 9 25 2 644.79742 1288.58757 -5.83 22.37 2382 2382 MS2 17/20 Linfeng_091311_rIgG_6.raw High LVVPATQcGSLIGK Unambiguous 1 1 IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 330 2.33 0.00 0 22 25 2 721.90375 1442.80022 -2.37 31.66 3631 3631 MS2 21/26 Linfeng_091311_rIgG_6.raw High IANPVEGSSGR Unambiguous 1 1 IPI00016610.2 CID 1.0000 0.0000 1 1 318 2.32 0.00 0 14 25 2 543.77930 1086.55132 -2.35 20.79 2170 2170 MS2 18/20 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 2.15 0.00 0 6 25 2 644.79883 1288.59038 -3.65 22.53 2377 2377 MS2 15/20 Linfeng_091311_rIgG_7.raw IPI00554648.3 "Keratin, type II cytoskeletal 8" 15.73 7 3 10 162 255.76 7.87 5 108 101.67 11.80 7 37 48.29 8.28 4 17 483 53.7 5.59 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 421 4.20 0.00 0 2 1 2 639.35785 1277.70842 -1.26 48.55 6564 6564 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 380 3.89 0.00 0 2 2 2 639.35907 1277.71086 0.65 48.55 5741 5741 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 383 3.76 0.00 0 0 1 2 639.35828 1277.70928 -0.59 48.53 7240 7240 MS2 18/20 Linfeng_20120130_CHD1_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 307 3.49 0.00 0 23 25 2 639.35968 1277.71208 1.61 38.39 3848 3848 MS2 18/20 Linfeng_122411_rIgG_3.raw High LSELEAALQR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 697 3.46 0.00 0 43 100 2 565.31573 1129.62419 2.63 36.22 4250 4250 MS2 16/18 Linfeng_20120130_CHD1_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 282 3.42 0.00 0 29 25 2 639.36078 1277.71428 3.33 38.29 3974 3974 MS2 18/20 Linfeng_122411_rIgG_4.raw High LSELEAALQR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 503 3.41 0.00 0 6 25 3 377.21158 1129.62018 -0.92 30.37 3084 3084 MS2 23/36 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 308 3.35 0.00 0 14 25 2 639.36005 1277.71282 2.18 39.42 4001 4001 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 282 3.33 0.00 0 16 25 2 639.36029 1277.71330 2.56 38.30 3457 3457 MS2 18/20 Linfeng_122411_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 299 3.29 0.00 0 5 7 2 639.35858 1277.70989 -0.11 38.42 4193 4193 MS2 18/20 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 299 3.28 0.00 0 15 17 2 639.35724 1277.70720 -2.22 39.51 4722 4722 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 306 3.28 0.00 0 29 25 2 639.35999 1277.71269 2.08 38.35 3867 3867 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 295 3.27 0.00 0 20 25 2 639.35999 1277.71269 2.08 40.55 4144 4144 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 305 3.18 0.00 0 23 25 2 639.36115 1277.71501 3.90 47.56 5036 5036 MS2 18/20 Linfeng_122411_rIgG_2.raw High LSELEAALQR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 698 3.18 0.00 0 34 100 2 565.31555 1129.62383 2.31 36.33 4275 4275 MS2 16/18 Linfeng_20120130_CHD1_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 306 3.13 0.00 0 9 25 2 639.36017 1277.71306 2.37 38.56 4056 4056 MS2 18/20 Linfeng_122411_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 3.10 0.00 0 8 4 2 639.35724 1277.70720 -2.22 39.64 4465 4465 MS2 18/20 Linfeng_091311_rIgG_1.raw High LEGLTDEINFLR Unambiguous 4 1 IPI00554648.3 CID 1.0000 0.0000 1 1 372 3.06 0.00 0 11 15 2 710.37805 1419.74883 0.66 40.76 4513 4513 MS2 20/22 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 275 2.88 0.00 0 16 25 2 639.36072 1277.71416 3.23 44.12 4597 4597 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 281 2.86 0.00 0 44 25 2 639.36108 1277.71489 3.80 55.44 5969 5969 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 302 2.84 0.00 0 19 25 2 639.35883 1277.71037 0.27 57.35 6547 6547 MS2 18/20 Linfeng_091311_rIgG_1.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 297 2.80 0.00 0 7 25 2 639.35742 1277.70757 -1.93 39.55 4662 4662 MS2 18/20 Linfeng_091311_rIgG_4.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.79 0.00 2 10 100 3 436.89084 1308.65796 2.80 17.26 1401 1401 MS2 16/36 Linfeng_20120130_CHD1_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 276 2.79 0.00 0 14 25 2 639.36023 1277.71318 2.47 41.60 4276 4276 MS2 18/20 Linfeng_122411_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 267 2.76 0.00 0 19 25 2 639.35938 1277.71147 1.13 57.08 6542 6542 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 286 2.75 0.00 0 51 25 2 639.36121 1277.71514 3.99 54.35 5853 5853 MS2 17/20 Linfeng_122411_rIgG_2.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 351 2.75 0.00 0 7 25 2 569.29388 1137.58049 1.60 22.57 2029 2029 MS2 16/18 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 253 2.74 0.00 0 53 25 2 639.36023 1277.71318 2.47 48.60 5166 5166 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 267 2.72 0.00 0 15 25 2 639.35748 1277.70769 -1.83 57.90 6603 6603 MS2 17/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 248 2.71 0.00 0 24 25 2 639.36096 1277.71465 3.61 52.60 5658 5658 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 332 2.69 0.00 0 21 25 2 639.35999 1277.71269 2.08 38.68 3768 3768 MS2 18/20 Linfeng_122411_rIgG_10.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.69 0.00 0 15 25 2 639.35748 1277.70769 -1.83 40.82 4627 4627 MS2 18/20 Linfeng_091311_rIgG_1.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 595 2.69 0.00 2 10 100 3 436.89072 1308.65760 2.52 17.32 1108 1108 MS2 18/36 Linfeng_20120130_CHD1_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 322 2.68 0.00 0 11 25 2 639.35724 1277.70720 -2.22 41.68 4931 4931 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 336 2.67 0.00 0 10 25 2 639.35712 1277.70696 -2.41 39.72 4662 4662 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 247 2.66 0.00 0 10 25 2 639.36072 1277.71416 3.23 54.23 6415 6415 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 299 2.65 0.00 0 47 25 2 639.36005 1277.71282 2.18 51.42 5981 5981 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 316 2.65 0.00 0 9 25 2 639.35718 1277.70708 -2.31 39.73 4653 4653 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 2.64 0.00 0 12 25 2 639.35724 1277.70720 -2.22 40.53 4853 4853 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 355 2.63 0.00 0 17 25 2 639.35803 1277.70879 -0.97 58.46 6793 6793 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 285 2.63 0.00 0 22 25 2 639.35754 1277.70781 -1.74 46.15 5566 5566 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 360 2.62 0.00 0 26 25 2 639.35785 1277.70842 -1.26 47.00 5572 5572 MS2 18/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 589 2.62 0.00 2 13 100 3 436.89093 1308.65824 3.01 17.53 1092 1092 MS2 16/36 Linfeng_20120130_CHD1_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.61 0.00 0 24 25 2 639.36078 1277.71428 3.33 49.59 5292 5292 MS2 15/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 298 2.61 0.00 0 6 25 2 639.35681 1277.70635 -2.88 40.79 4786 4786 MS2 18/20 Linfeng_091311_rIgG_7.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.60 0.00 0 17 25 2 639.35687 1277.70647 -2.79 43.85 5205 5205 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 278 2.59 0.00 0 9 25 2 639.35864 1277.71001 -0.02 56.85 6692 6692 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 298 2.59 0.00 0 12 25 2 639.35742 1277.70757 -1.93 39.43 4653 4653 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.58 0.00 2 9 100 3 436.89099 1308.65842 3.15 17.65 1106 1106 MS2 17/36 Linfeng_20120130_CHD1_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 320 2.58 0.00 0 14 25 2 639.35693 1277.70659 -2.69 43.98 5290 5290 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 257 2.58 0.00 0 27 25 2 639.36108 1277.71489 3.80 38.32 2863 2863 MS2 17/20 Linfeng_122411_rIgG_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.57 0.00 0 20 25 2 639.35675 1277.70622 -2.98 39.80 4662 4662 MS2 18/20 Linfeng_091311_rIgG_9.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 315 2.57 0.00 0 0 25 2 639.35718 1277.70708 -2.31 41.60 4989 4989 MS2 18/20 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 598 2.57 0.00 2 12 100 3 436.89081 1308.65787 2.73 17.92 1286 1286 MS2 17/36 Linfeng_20120130_CHD1_9.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 285 2.57 0.00 0 21 25 2 639.36041 1277.71355 2.75 51.59 5541 5541 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 337 2.54 0.00 0 6 25 2 639.35815 1277.70903 -0.78 45.93 5466 5466 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.54 0.00 0 11 25 2 639.35730 1277.70732 -2.12 39.69 4805 4805 MS2 18/20 Linfeng_091311_rIgG_10.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 2.54 0.00 0 3 25 2 639.35712 1277.70696 -2.41 40.59 4794 4794 MS2 18/20 Linfeng_091311_rIgG_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 320 2.52 0.00 0 0 25 2 639.35840 1277.70952 -0.40 47.96 5722 5722 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 284 2.52 0.00 0 21 25 2 639.35828 1277.70928 -0.59 47.07 5611 5611 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 289 2.51 0.00 0 20 25 2 639.35724 1277.70720 -2.22 40.76 4793 4793 MS2 18/20 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 600 2.50 0.00 2 19 100 3 436.89096 1308.65833 3.08 17.18 1130 1130 MS2 17/36 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 405 2.50 0.00 0 18 25 2 639.35785 1277.70842 -1.26 49.38 5973 5973 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 463 2.48 0.00 0 1 2 2 639.35834 1277.70940 -0.50 48.56 6618 6618 MS2 14/20 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 321 2.48 0.00 0 2 25 2 639.35706 1277.70683 -2.50 42.71 5061 5061 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 330 2.46 0.00 0 20 25 2 639.35992 1277.71257 1.99 54.68 6585 6585 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 328 2.45 0.00 0 33 25 2 639.35712 1277.70696 -2.41 41.51 4915 4915 MS2 18/20 Linfeng_091311_rIgG_3.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw Medium NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 601 2.45 0.00 2 5 100 3 436.89117 1308.65897 3.57 18.20 1201 1201 MS2 17/36 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.45 0.00 0 25 25 2 639.35742 1277.70757 -1.93 41.96 4933 4933 MS2 18/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 293 2.44 0.00 0 12 25 2 639.35651 1277.70574 -3.36 39.73 4633 4633 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 322 2.43 0.00 0 11 25 2 639.35876 1277.71025 0.17 50.14 5998 5998 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 298 2.43 0.00 0 21 25 2 639.35675 1277.70622 -2.98 45.08 5429 5429 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 294 2.43 0.00 0 12 25 2 639.35815 1277.70903 -0.78 57.73 6858 6858 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 2.42 0.00 0 12 25 2 639.35889 1277.71050 0.36 57.87 6780 6780 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 334 2.42 0.00 0 0 25 2 639.35870 1277.71013 0.08 52.20 6228 6228 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 252 2.42 0.00 0 13 25 2 639.35742 1277.70757 -1.93 58.91 6875 6875 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 276 2.42 0.00 0 23 25 2 639.35724 1277.70720 -2.22 58.75 6942 6942 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 318 2.41 0.00 0 15 25 2 639.35632 1277.70537 -3.65 42.99 5166 5166 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 285 2.41 0.00 0 20 25 2 639.35779 1277.70830 -1.36 48.39 5850 5850 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 307 2.40 0.00 0 19 25 2 639.35767 1277.70806 -1.55 50.47 6111 6111 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 275 2.40 0.00 0 17 25 2 639.36017 1277.71306 2.37 46.17 4859 4859 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 287 2.39 0.00 0 15 25 2 639.35754 1277.70781 -1.74 46.95 5593 5593 MS2 18/20 Linfeng_091311_rIgG_4.raw High EYQELMNVK Unambiguous 11 3 IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 443 2.39 0.00 0 21 100 2 577.28339 1153.55950 3.18 27.07 2040 2040 MS2 10/16 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 272 2.39 0.00 0 25 25 2 639.35858 1277.70989 -0.11 55.69 6680 6680 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 297 2.38 0.00 0 27 25 2 639.35687 1277.70647 -2.79 40.79 4787 4787 MS2 18/20 Linfeng_091311_rIgG_9.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 328 2.38 0.00 0 49 25 2 639.36115 1277.71501 3.90 42.71 4418 4418 MS2 17/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 310 2.38 0.00 0 29 25 2 639.35852 1277.70976 -0.21 52.38 6257 6257 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 304 2.37 0.00 0 27 25 2 639.35663 1277.70598 -3.17 39.76 4747 4747 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 320 2.37 0.00 0 21 25 2 639.35687 1277.70647 -2.79 40.82 4884 4884 MS2 18/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 261 2.37 0.00 0 19 25 2 639.35907 1277.71086 0.65 54.41 6456 6456 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 312 2.36 0.00 0 43 25 2 639.35870 1277.71013 0.08 56.85 6536 6536 MS2 18/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 303 2.36 0.00 0 30 25 2 639.35736 1277.70745 -2.02 40.48 4785 4785 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 288 2.36 0.00 0 12 25 2 639.36047 1277.71367 2.85 45.12 4725 4725 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 333 2.34 0.00 0 12 25 2 639.35901 1277.71074 0.56 53.47 6470 6470 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 2.34 0.00 0 14 25 2 639.35815 1277.70903 -0.78 44.89 5334 5334 MS2 18/20 Linfeng_091311_rIgG_4.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 563 2.33 0.00 2 5 100 2 654.83331 1308.65935 3.86 17.48 1151 1151 MS2 13/18 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 259 2.32 0.00 0 41 25 2 639.35974 1277.71221 1.70 52.81 6214 6214 MS2 16/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 311 2.32 0.00 0 32 25 2 639.35919 1277.71111 0.84 51.45 6234 6234 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 280 2.30 0.00 0 12 25 2 639.35773 1277.70818 -1.45 49.00 5854 5854 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 368 2.29 0.00 0 39 25 2 639.35791 1277.70854 -1.16 46.09 5489 5489 MS2 18/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 256 2.28 0.00 0 20 25 2 639.35767 1277.70806 -1.55 51.78 6128 6128 MS2 17/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.28 0.00 2 19 25 2 654.82996 1308.65264 -1.27 18.49 1833 1833 MS2 14/18 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 293 2.27 0.00 0 30 25 2 639.35992 1277.71257 1.99 53.85 6301 6301 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 369 2.27 0.00 0 16 25 2 639.35797 1277.70867 -1.07 58.32 6740 6740 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 436 2.26 0.00 0 0 1 2 639.35822 1277.70915 -0.69 48.57 6280 6280 MS2 14/20 Linfeng_20120130_CHD1_2.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 386 2.26 0.00 0 32 25 2 569.29132 1137.57536 -2.91 28.22 3124 3124 MS2 15/18 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 286 2.26 0.00 0 74 25 2 639.35742 1277.70757 -1.93 54.71 6487 6487 MS2 18/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 293 2.25 0.00 0 25 25 2 639.35925 1277.71123 0.94 57.30 6896 6896 MS2 16/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 279 2.25 0.00 0 16 25 2 639.35895 1277.71062 0.46 52.47 6357 6357 MS2 18/20 Linfeng_091311_rIgG_2.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 341 2.24 0.00 2 1 25 2 654.82910 1308.65093 -2.58 18.43 1863 1863 MS2 14/18 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 275 2.24 0.00 0 0 25 2 639.35962 1277.71196 1.51 56.70 6776 6776 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 302 2.24 0.00 0 23 25 2 639.35834 1277.70940 -0.50 44.99 5351 5351 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 356 2.24 0.00 0 49 25 2 639.35797 1277.70867 -1.07 47.18 5697 5697 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 301 2.23 0.00 0 23 25 2 639.35815 1277.70903 -0.78 50.01 5982 5982 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.23 0.00 0 22 25 2 639.35846 1277.70964 -0.30 57.44 6712 6712 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.22 0.00 0 9 25 2 639.35962 1277.71196 1.51 57.32 6664 6664 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 262 2.22 0.00 0 0 25 2 639.35907 1277.71086 0.65 56.30 6588 6588 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 291 2.22 0.00 0 34 25 2 639.35944 1277.71160 1.22 52.58 6256 6256 MS2 17/20 Linfeng_091311_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 277 2.21 0.00 0 31 25 2 639.36035 1277.71343 2.66 56.18 6442 6442 MS2 17/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 304 2.21 0.00 0 24 25 2 639.35840 1277.70952 -0.40 51.13 6113 6113 MS2 16/20 Linfeng_091311_rIgG_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.18 0.00 0 10 25 2 639.36121 1277.71514 3.99 52.03 6131 6131 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.18 0.00 0 20 25 2 639.35944 1277.71160 1.22 56.43 6637 6637 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 319 2.17 0.00 0 29 25 2 639.35858 1277.70989 -0.11 51.12 6119 6119 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 290 2.17 0.00 0 20 25 2 639.35767 1277.70806 -1.55 57.91 6613 6613 MS2 17/20 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 306 2.17 0.00 0 10 25 2 639.35754 1277.70781 -1.74 45.33 5363 5363 MS2 18/20 Linfeng_091311_rIgG_6.raw High YEELQSLAGK Unambiguous 3 1 IPI00554648.3 CID 1.0000 0.0000 1 1 384 2.16 0.00 0 47 25 2 569.29425 1137.58122 2.24 21.54 1902 1902 MS2 16/18 Linfeng_122411_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 296 2.15 0.00 0 49 25 2 639.35779 1277.70830 -1.36 48.47 5758 5758 MS2 15/20 Linfeng_091311_rIgG_6.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 530 2.14 0.00 2 0 100 2 654.83240 1308.65752 2.46 17.66 1131 1131 MS2 13/18 Linfeng_20120130_CHD1_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 288 2.12 0.00 0 14 25 2 639.35980 1277.71233 1.80 53.20 6322 6322 MS2 17/20 Linfeng_091311_rIgG_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 272 2.12 0.00 0 40 25 2 639.35919 1277.71111 0.84 55.41 6551 6551 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 300 2.12 0.00 0 7 25 2 639.35687 1277.70647 -2.79 42.02 4951 4951 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 293 2.11 0.00 0 28 25 2 639.35883 1277.71037 0.27 50.99 6039 6039 MS2 16/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 267 2.10 0.00 0 46 25 2 639.35687 1277.70647 -2.79 58.93 6679 6679 MS2 15/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 284 2.10 0.00 0 79 25 2 639.35693 1277.70659 -2.69 49.98 5932 5932 MS2 14/20 Linfeng_091311_rIgG_7.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 297 2.10 0.00 0 19 25 2 639.35889 1277.71050 0.36 48.09 5740 5740 MS2 16/20 Linfeng_091311_rIgG_3.raw High NKYEDEINKR Unambiguous 13 5 IPI00220327.4;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00554648.3 CID 1.0000 0.0000 1 1 342 2.09 0.00 2 15 25 2 654.82941 1308.65154 -2.11 18.71 1881 1881 MS2 13/18 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 299 2.09 0.00 0 47 25 2 639.35938 1277.71147 1.13 56.89 6527 6527 MS2 15/20 Linfeng_091311_rIgG_7.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 270 2.07 0.00 0 9 25 2 639.35895 1277.71062 0.46 53.39 6361 6361 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 316 2.06 0.00 0 77 25 2 639.36060 1277.71391 3.04 56.29 6795 6795 MS2 17/20 Linfeng_091311_rIgG_8.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 295 2.06 0.00 0 49 25 2 639.35779 1277.70830 -1.36 43.56 5135 5135 MS2 17/20 Linfeng_091311_rIgG_7.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 328 2.04 0.00 0 32 25 2 639.36115 1277.71501 3.90 49.09 5866 5866 MS2 16/20 Linfeng_091311_rIgG_3.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 290 2.03 0.00 0 0 25 2 639.35925 1277.71123 0.94 53.58 6373 6373 MS2 16/20 Linfeng_091311_rIgG_5.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00329389.8 60S ribosomal protein L6 15.63 3 4 4 6 18.39 15.63 4 6 288 32.7 10.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QLASGLLLVTGPLVLNR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 19 4.20 0.00 0 60 25 2 882.53949 1764.07170 -1.46 46.54 5515 5515 MS2 24/32 Linfeng_091311_rIgG_6.raw High QLASGLLLVTGPLVLNR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 28 3.66 0.00 0 28 25 3 588.69519 1764.07102 -1.84 46.50 5510 5510 MS2 30/64 Linfeng_091311_rIgG_6.raw High HQEGEIFDTEKEK Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 202 2.78 0.00 1 25 25 3 530.58484 1589.73996 -2.70 20.86 2181 2181 MS2 24/48 Linfeng_091311_rIgG_6.raw High ASITPGTILIILTGR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 76 2.68 0.00 0 23 25 3 509.31519 1525.93100 -0.18 51.88 6138 6138 MS2 29/56 Linfeng_091311_rIgG_6.raw High ASITPGTILIILTGR Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 61 2.68 0.00 0 34 25 3 509.31610 1525.93375 1.62 52.13 6144 6144 MS2 23/56 Linfeng_091311_rIgG_7.raw High HQEGEIFDTEK Unambiguous 3 1 IPI00329389.8 CID 1.0000 0.0000 1 1 147 2.40 0.00 0 12 25 2 666.80542 1332.60356 -2.35 23.43 2528 2528 MS2 17/20 Linfeng_091311_rIgG_6.raw IPI00005648.1 Scaffold attachment factor B2 15.42 3 5 12 35 31.25 11.96 8 9 28.23 11.23 6 7 79.86 11.86 7 19 953 107.4 6.16 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 97 7.74 0.00 1 1 25 4 889.91260 3556.62856 2.42 31.92 3021 3021 MS2 64/192 Linfeng_122411_rIgG_3.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 80 6.66 0.00 1 10 25 4 889.90790 3556.60976 -2.86 32.78 3843 3843 MS2 55/192 Linfeng_091311_rIgG_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 350 5.81 0.00 1 2 100 3 950.11304 2848.32456 4.39 35.30 3188 3188 MS2 43/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 349 5.63 0.00 1 4 100 3 950.11249 2848.32291 3.81 35.48 3227 3227 MS2 38/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 157 5.57 0.00 1 1 12 3 950.10638 2848.30460 -2.62 30.75 3573 3573 MS2 42/100 Linfeng_091311_rIgG_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 360 5.54 0.00 1 2 100 3 950.11359 2848.32621 4.97 35.10 3148 3148 MS2 40/100 Linfeng_20120130_CHD1_2.raw High SEPVKEESSELEQPFAQDTSSVGPDR Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 350 5.40 0.00 1 4 100 3 950.11304 2848.32456 4.39 34.88 3111 3111 MS2 38/100 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 226 4.97 0.00 0 3 100 4 857.89056 3428.54043 4.50 42.02 4660 4660 MS2 43/186 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 275 4.60 0.00 1 14 100 4 889.91467 3556.63686 4.75 42.08 4675 4675 MS2 42/192 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 245 4.58 0.00 0 15 100 4 857.89197 3428.54604 6.14 42.13 4687 4687 MS2 42/186 Linfeng_20120130_CHD1_2.raw High EEGQDPDEIGIELEATSK Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 350 4.54 0.00 0 5 100 2 980.45996 1959.91265 4.90 39.61 4117 4117 MS2 19/34 Linfeng_20120130_CHD1_2.raw High EEGQDPDEIGIELEATSK Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 333 4.49 0.00 0 14 100 2 980.46008 1959.91289 5.02 39.55 4105 4105 MS2 21/34 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 285 4.36 0.00 1 15 100 4 889.91339 3556.63173 3.31 42.19 4702 4702 MS2 44/192 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 80 4.26 0.00 0 0 17 4 857.88892 3428.53383 2.58 33.39 3212 3212 MS2 48/186 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 62 4.18 0.00 0 2 25 4 857.88373 3428.51308 -3.47 34.27 3994 3994 MS2 47/186 Linfeng_091311_rIgG_3.raw High AVKEEGQDPDEIGIELEATSK Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 355 4.15 0.00 1 4 25 3 753.37396 2258.10733 1.68 30.84 2880 2880 MS2 35/80 Linfeng_122411_rIgG_3.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 226 4.13 0.00 0 12 100 4 857.89056 3428.54043 4.50 41.88 4628 4628 MS2 39/186 Linfeng_20120130_CHD1_2.raw High LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 CID 1.0000 0.0000 1 1 227 3.97 0.00 0 16 100 4 857.89063 3428.54067 4.58 41.81 4612 4612 MS2 43/186 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 400 3.57 0.00 1 12 100 3 578.94580 1734.82285 4.14 34.23 2988 2988 MS2 23/56 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 398 3.53 0.00 1 13 100 3 578.94592 1734.82322 4.35 34.36 3015 3015 MS2 24/56 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 3.48 0.00 1 10 100 3 578.94574 1734.82267 4.03 34.31 3004 3004 MS2 27/56 Linfeng_20120130_CHD1_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 241 3.41 0.00 1 4 25 3 578.94489 1734.82010 2.55 28.32 2549 2549 MS2 29/56 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 222 3.27 0.00 1 18 25 3 578.94171 1734.81058 -2.94 29.69 3430 3430 MS2 27/56 Linfeng_091311_rIgG_2.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 3.11 0.00 1 16 100 3 578.94489 1734.82010 2.55 34.58 3054 3054 MS2 23/56 Linfeng_20120130_CHD1_2.raw High KLAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 95 3.06 0.00 1 3 25 5 712.13104 3556.62611 1.73 32.02 3034 3034 MS2 51/256 Linfeng_122411_rIgG_3.raw Medium SEPVKEESSELEQPFAQDTSSVGPDRK Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 162 2.99 0.00 2 14 25 4 744.85962 2976.41665 3.23 27.45 2436 2436 MS2 32/156 Linfeng_122411_rIgG_3.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 699 2.87 0.00 0 26 100 2 581.31482 1161.62236 3.37 43.03 4902 4902 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 634 2.85 0.00 0 23 100 2 581.31451 1161.62175 2.85 42.34 4738 4738 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NLWVSGLSSTTR Unambiguous 3 1 IPI00005648.1 CID 1.0000 0.0000 1 1 401 2.63 0.00 0 10 25 2 660.84998 1320.69267 1.50 33.10 3174 3174 MS2 17/22 Linfeng_122411_rIgG_3.raw High KFDFDAcNEVPPAPK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 219 2.53 0.00 1 10 25 3 578.94226 1734.81223 -1.99 29.73 3398 3398 MS2 21/56 Linfeng_091311_rIgG_3.raw High NTLETSSLNFK Unambiguous 2 1 IPI00005648.1 CID 1.0000 0.0000 1 1 499 2.43 0.00 0 40 100 2 627.32513 1253.64299 4.58 32.31 2626 2626 MS2 14/20 Linfeng_20120130_CHD1_2.raw High NTLETSSLNFK Unambiguous 2 1 IPI00005648.1 CID 1.0000 0.0000 1 1 295 2.39 0.00 0 16 25 2 627.32068 1253.63408 -2.53 29.80 3445 3445 MS2 17/20 Linfeng_091311_rIgG_2.raw High ILDILGETcK Unambiguous 7 2 IPI00925702.1;IPI00005648.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 434 2.26 0.00 0 11 14 2 581.31024 1161.61321 -4.51 35.31 4175 4175 MS2 16/18 Linfeng_091311_rIgG_2.raw High REPAEQPGDGER Unambiguous 7 2 IPI00005648.1;IPI00925702.1 CID 1.0000 0.0000 1 1 122 2.21 0.00 1 16 25 2 670.81232 1340.61736 -1.23 13.33 1143 1143 MS2 16/22 Linfeng_091311_rIgG_2.raw High LQLEcQR Unambiguous 1 1 IPI00005648.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 469 2.18 0.00 0 23 25 2 473.74100 946.47472 -2.96 21.53 2297 2297 MS2 11/12 Linfeng_091311_rIgG_2.raw IPI00290410.3 Deoxynucleotidyltransferase terminal-interacting protein 2 15.31 2 8 8 12 18.12 10.49 6 6 19.04 11.73 6 6 0.00 810 90.6 5.97 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLSELQDTSLQQLVSQR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 392 4.55 0.00 0 4 25 3 653.67780 1959.01883 2.35 38.47 3859 3859 MS2 35/64 Linfeng_122411_rIgG_3.raw High NLSELQDTSLQQLVSQR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 428 4.26 0.00 0 6 25 3 653.67432 1959.00840 -2.98 39.28 4635 4635 MS2 32/64 Linfeng_091311_rIgG_3.raw High TIVEELLADSEFR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 388 3.01 0.00 0 53 25 3 507.93271 1521.78357 2.62 45.85 4925 4925 MS2 22/48 Linfeng_122411_rIgG_4.raw High LTSSSIDPGLSIK Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 409 2.99 0.00 0 29 25 2 659.36749 1317.72771 1.24 29.51 2706 2706 MS2 18/24 Linfeng_122411_rIgG_3.raw High SLTQTFATVEVGR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 388 2.98 0.00 0 27 25 2 704.87640 1408.74553 1.70 32.34 3076 3076 MS2 21/24 Linfeng_122411_rIgG_3.raw High LTSSSIDPGLSIK Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 375 2.96 0.00 0 17 25 2 659.36505 1317.72283 -2.47 30.91 3555 3555 MS2 20/24 Linfeng_091311_rIgG_3.raw Medium SSENILTVHEQANVESLKETK Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 299 2.89 0.00 1 34 25 4 589.80743 2356.20791 3.72 25.03 2113 2113 MS2 31/120 Linfeng_122411_rIgG_3.raw High QIVGTPVNSEDSDTR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 173 2.83 0.00 0 8 25 2 809.38690 1617.76653 -3.10 23.37 2524 2524 MS2 17/28 Linfeng_091311_rIgG_3.raw High SLTQTFATVEVGR Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 373 2.74 0.00 0 26 25 2 704.87299 1408.73870 -3.15 33.46 3890 3890 MS2 20/24 Linfeng_091311_rIgG_3.raw High ASIQAASAESSGQK Unambiguous 2 1 IPI00290410.3 CID 1.0000 0.0000 1 1 347 2.73 0.00 0 24 25 2 667.83044 1334.65361 -0.82 17.22 1666 1666 MS2 19/26 Linfeng_091311_rIgG_3.raw High YFQIGTIVDNPADFYHSR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 321 2.62 0.00 0 7 25 3 715.01465 2143.02939 2.33 38.96 3922 3922 MS2 32/68 Linfeng_122411_rIgG_3.raw High TIVEELLADSEFR Unambiguous 1 1 IPI00290410.3 CID 1.0000 0.0000 1 1 382 2.61 0.00 0 26 25 2 761.39380 1521.78032 0.48 46.96 5598 5598 MS2 19/24 Linfeng_091311_rIgG_3.raw IPI00061200.5 "Keratin, type II cytoskeletal 71" 15.30 3 3 9 71 54.23 8.99 5 19 70.04 7.84 5 26 112.06 6.31 3 26 523 57.3 6.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 665 5.29 0.00 0 60 100 2 738.88867 1476.77007 0.49 28.97 2341 2341 MS2 20/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 574 4.90 0.00 0 38 100 2 738.89075 1476.77422 3.30 28.50 1975 1975 MS2 20/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 625 4.88 0.00 0 57 100 2 738.88953 1476.77178 1.65 30.55 2739 2739 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 637 4.79 0.00 0 57 100 2 738.88940 1476.77153 1.48 28.37 2550 2550 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 629 4.79 0.00 0 60 100 2 738.89001 1476.77275 2.31 29.25 2144 2144 MS2 20/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 623 4.78 0.00 0 54 100 2 738.88977 1476.77226 1.98 28.43 2563 2563 MS2 20/22 Linfeng_20120130_CHD1_10.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 632 4.76 0.00 0 40 100 2 738.88922 1476.77117 1.24 29.11 2583 2583 MS2 20/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 615 4.73 0.00 0 26 92 2 738.89063 1476.77397 3.14 29.32 2495 2495 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 628 4.70 0.00 0 37 100 2 738.88959 1476.77190 1.73 28.67 1994 1994 MS2 18/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 620 4.68 0.00 0 42 100 2 738.88953 1476.77178 1.65 30.66 2760 2760 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 625 4.63 0.00 0 52 100 2 738.88953 1476.77178 1.65 28.40 1964 1964 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 627 4.45 0.00 0 58 100 2 738.88995 1476.77263 2.23 28.80 2009 2009 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 636 4.44 0.00 0 54 100 2 738.88983 1476.77239 2.06 29.28 2068 2068 MS2 20/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 629 4.43 0.00 0 68 100 2 738.88940 1476.77153 1.48 30.42 2711 2711 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 654 4.41 0.00 0 55 100 2 738.88824 1476.76921 -0.09 29.52 2200 2200 MS2 19/22 Linfeng_20120130_CHD1_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 646 4.40 0.00 0 55 100 2 738.88910 1476.77092 1.07 30.47 2723 2723 MS2 20/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 623 4.37 0.00 0 61 100 2 738.88879 1476.77031 0.66 28.34 2466 2466 MS2 20/22 Linfeng_20120130_CHD1_8.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 610 4.35 0.00 0 43 100 2 738.89050 1476.77373 2.97 28.59 1986 1986 MS2 19/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 614 4.07 0.00 0 28 100 2 738.89008 1476.77287 2.39 29.62 2106 2106 MS2 18/22 Linfeng_20120130_CHD1_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 631 3.99 0.00 0 34 100 2 738.88959 1476.77190 1.73 30.51 2867 2867 MS2 19/22 Linfeng_20120130_CHD1_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 632 3.99 0.00 0 43 100 2 738.88934 1476.77141 1.40 30.70 2770 2770 MS2 19/22 Linfeng_20120130_CHD1_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 641 3.91 0.00 0 42 100 2 738.88916 1476.77104 1.15 30.82 2383 2383 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.86 0.00 0 22 25 2 738.88586 1476.76445 -3.31 28.46 3190 3190 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.73 0.00 0 41 25 2 738.88519 1476.76311 -4.22 28.32 3190 3190 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 640 3.71 0.00 0 33 100 2 738.88947 1476.77165 1.57 30.87 2389 2389 MS2 18/22 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.71 0.00 0 24 25 2 738.88623 1476.76518 -2.81 28.18 3182 3182 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.64 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.21 3229 3229 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 591 3.60 0.00 0 33 100 2 738.89093 1476.77458 3.55 30.52 2606 2606 MS2 18/22 Linfeng_20120130_CHD1_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.52 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.30 2931 2931 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.50 0.00 0 35 25 2 738.88617 1476.76506 -2.90 28.43 3152 3152 MS2 20/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.49 0.00 0 30 25 2 738.88593 1476.76457 -3.23 28.38 3177 3177 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.37 0.00 0 34 25 2 738.88947 1476.77165 1.57 24.07 2225 2225 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 455 3.32 0.00 0 7 25 2 738.88947 1476.77165 1.57 23.02 2088 2088 MS2 18/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 445 3.25 0.00 0 13 25 2 738.88959 1476.77190 1.73 27.08 2585 2585 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.18 0.00 0 14 25 2 738.89020 1476.77312 2.56 25.27 2170 2170 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.15 0.00 0 18 25 2 738.89014 1476.77300 2.48 25.89 2370 2370 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.14 0.00 0 23 25 2 738.89056 1476.77385 3.05 24.49 2041 2041 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 444 3.08 0.00 0 14 25 2 738.88922 1476.77117 1.24 26.28 2306 2306 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.04 0.00 0 52 25 2 738.88947 1476.77165 1.57 24.24 2038 2038 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.02 0.00 0 3 25 2 738.88605 1476.76482 -3.06 29.62 3110 3110 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.99 0.00 0 9 25 2 738.89032 1476.77336 2.72 25.89 2226 2226 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.92 0.00 0 7 25 2 738.88977 1476.77226 1.98 27.13 2535 2535 MS2 17/22 Linfeng_122411_rIgG_4.raw High FQELQLAAGR Unambiguous 4 1 IPI00061200.5 CID 1.0000 0.0000 1 1 435 2.91 0.00 0 27 25 2 566.80743 1132.60759 -3.00 30.63 3482 3482 MS2 17/18 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 39 25 2 738.88611 1476.76494 -2.98 29.46 3399 3399 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 472 2.85 0.00 0 15 25 2 738.88654 1476.76579 -2.40 29.49 3358 3358 MS2 19/22 Linfeng_091311_rIgG_4.raw High FQELQLAAGR Unambiguous 4 1 IPI00061200.5 CID 1.0000 0.0000 1 1 605 2.84 0.00 0 34 100 2 566.81189 1132.61650 4.87 32.66 2699 2699 MS2 14/18 Linfeng_20120130_CHD1_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.84 0.00 0 17 25 2 738.89008 1476.77287 2.39 27.61 2484 2484 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.78 0.00 0 32 25 2 738.88861 1476.76995 0.41 26.06 2493 2493 MS2 20/22 Linfeng_122411_rIgG_5.raw High NLDLDSIIDEVR Unambiguous 2 1 IPI00061200.5 CID 1.0000 0.0000 1 1 418 2.66 0.00 0 35 25 2 701.36658 1401.72588 2.72 45.31 4904 4904 MS2 19/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 478 2.65 0.00 0 44 25 3 492.92874 1476.77167 1.58 24.37 2055 2055 MS2 21/44 Linfeng_122411_rIgG_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High NLDLDSIIDEVR Unambiguous 2 1 IPI00061200.5 CID 1.0000 0.0000 1 1 419 2.48 0.00 0 22 25 2 701.36591 1401.72453 1.76 45.13 4721 4721 MS2 19/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.47 0.00 0 15 25 2 738.89001 1476.77275 2.31 28.54 2780 2780 MS2 16/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 448 2.34 0.00 0 10 25 2 738.88995 1476.77263 2.23 27.68 2464 2464 MS2 18/22 Linfeng_122411_rIgG_3.raw High LLESEEcR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.33 0.00 0 37 25 2 518.23932 1035.47136 -6.01 19.84 1993 1993 MS2 12/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High LALDmEIATYR Unambiguous 1 1 IPI00061200.5 M5(Oxidation) CID 1.0000 0.0000 1 1 441 2.16 0.00 0 40 100 2 656.33844 1311.66960 6.27 39.08 4001 4001 MS2 12/20 Linfeng_20120130_CHD1_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00909890.1 "cDNA FLJ58049, highly similar to RNA-binding protein FUS" 15.15 7 3 5 15 15.48 13.29 4 4 33.36 7.69 3 11 429 44.8 9.00 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HDSEQDNSDNNTIFVQGLGENVTIESVADYFK Unambiguous 5 1 IPI00909890.1 CID 1.0000 0.0000 1 1 83 7.81 0.00 0 8 25 3 1195.87964 3585.62436 -0.27 48.02 5730 5730 MS2 42/124 Linfeng_091311_rIgG_4.raw High AAIDWFDGKEFSGNPIK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 349 4.38 0.00 1 2 20 3 632.31769 1894.93851 2.65 38.37 3984 3984 MS2 34/64 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 183 3.24 0.00 0 0 25 2 710.83551 1420.66374 3.24 20.89 1743 1743 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 182 3.18 0.00 0 1 25 2 710.83557 1420.66387 3.33 19.87 1633 1633 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 165 3.10 0.00 0 5 24 2 710.83167 1420.65605 -2.17 4.72 556 556 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 181 2.92 0.00 0 0 25 2 710.83557 1420.66387 3.33 16.81 1369 1369 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 186 2.87 0.00 0 1 25 2 710.83521 1420.66313 2.81 17.83 1453 1453 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 176 2.87 0.00 0 4 25 2 710.83508 1420.66289 2.64 18.85 1540 1540 MS2 19/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 192 2.82 0.00 0 13 25 2 710.83563 1420.66399 3.41 15.81 1287 1287 MS2 20/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 195 2.78 0.00 0 0 25 2 710.83545 1420.66362 3.15 14.80 1212 1212 MS2 17/26 Linfeng_122411_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 185 2.69 0.00 0 27 25 2 710.83527 1420.66326 2.90 25.14 2327 2327 MS2 19/26 Linfeng_122411_rIgG_6.raw High LKGEATVSFDDPPSAK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 407 2.68 0.00 1 20 25 3 554.61517 1661.83097 -4.34 25.32 2791 2791 MS2 30/60 Linfeng_091311_rIgG_4.raw High GEATVSFDDPPSAK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 162 2.65 0.00 0 0 25 2 710.82874 1420.65019 -6.30 26.57 2961 2961 MS2 20/26 Linfeng_091311_rIgG_4.raw High LKGEATVSFDDPPSAK Unambiguous 7 1 IPI00909890.1 CID 1.0000 0.0000 1 1 409 2.53 0.00 1 8 25 3 554.61884 1661.84195 2.27 24.21 2145 2145 MS2 29/60 Linfeng_122411_rIgG_4.raw High AAIDWFDGK Unambiguous 9 2 IPI00020194.1;IPI00909890.1 CID 1.0000 0.0000 1 1 249 2.33 0.00 0 17 25 2 511.74945 1022.49162 -2.55 36.49 4273 4273 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00007188.5 ADP/ATP translocase 2 15.10 1 2 4 6 17.02 15.10 4 6 298 32.9 9.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFLAGGVAAAISK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 353 3.66 0.00 0 11 25 2 610.33862 1219.66997 1.46 36.33 3211 3211 MS2 21/24 Linfeng_122411_rIgG_7.raw High DFLAGGVAAAISK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 372 3.25 0.00 0 5 25 3 407.22803 1219.66953 1.10 36.39 3219 3219 MS2 30/48 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 494 3.00 0.00 0 12 25 3 482.91943 1446.74375 1.44 41.36 3840 3840 MS2 28/44 Linfeng_122411_rIgG_7.raw High AAYFGIYDTAK Unambiguous 1 1 IPI00007188.5 CID 1.0000 0.0000 1 1 322 2.62 0.00 0 21 14 2 610.30267 1219.59807 -1.09 4.00 405 405 MS2 17/20 Linfeng_122411_rIgG_7.raw High YFPTQALNFAFK Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 379 2.48 0.00 0 4 25 2 723.87616 1446.74504 2.34 41.30 3832 3832 MS2 20/22 Linfeng_122411_rIgG_7.raw High EQGVLSFWR Unambiguous 3 2 IPI00007188.5;IPI00645646.1 CID 1.0000 0.0000 1 1 341 2.01 0.00 0 5 25 2 561.29144 1121.57561 1.55 37.97 3417 3417 MS2 13/16 Linfeng_122411_rIgG_7.raw IPI00794267.1 18 kDa protein 14.97 2 1 3 6 0.00 13.45 14.97 3 6 167 18.1 10.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LASYLDRVR Unambiguous 2 1 IPI00794267.1 CID 1.0000 0.0000 1 1 505 2.65 0.00 1 70 100 2 546.80804 1092.60881 -6.63 34.41 3386 3386 MS2 14/16 Linfeng_20120130_CHD1_1.raw High LASYLDRVR Unambiguous 2 1 IPI00794267.1 CID 1.0000 0.0000 1 1 496 2.38 0.00 1 59 100 2 546.80811 1092.60893 -6.52 34.23 3349 3349 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LASYLDRVR Unambiguous 2 1 IPI00794267.1 CID 1.0000 0.0000 1 1 508 2.27 0.00 1 72 100 2 546.80804 1092.60881 -6.63 34.36 3378 3378 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 445 2.07 0.00 0 13 100 2 404.20502 807.40276 3.92 24.13 1661 1661 MS2 9/12 Linfeng_20120130_CHD1_1.raw High LAADDFR Unambiguous 29 6 IPI00009865.4;IPI00217963.3;IPI00384444.6;IPI00450768.7;IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 485 2.05 0.00 0 9 100 2 404.20511 807.40294 4.15 23.93 1643 1643 MS2 11/12 Linfeng_20120130_CHD1_1.raw High IVLQIDNAR Unambiguous 5 2 IPI00789324.3;IPI00794267.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 33 100 2 521.30756 1041.60784 2.56 28.48 2457 2457 MS2 13/16 Linfeng_20120130_CHD1_5.raw IPI00307466.2 Isoform 2 of Serpin B3 14.79 2 4 4 5 15.06 14.79 4 5 338 38.5 6.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FYQTSVESVDFANAPEESR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 148 4.44 0.00 0 13 25 3 726.00116 2175.98893 2.72 33.00 3361 3361 MS2 32/72 Linfeng_122411_rIgG_6.raw High INSWVESQTNEK Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 246 3.29 0.00 0 15 25 2 717.84717 1434.68706 0.74 23.63 2117 2117 MS2 19/22 Linfeng_122411_rIgG_6.raw High TNSILFYGR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 353 2.81 0.00 0 12 25 2 535.78613 1070.56499 1.90 31.87 3215 3215 MS2 15/16 Linfeng_122411_rIgG_6.raw High TNSILFYGR Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 328 2.28 0.00 0 47 25 2 535.78552 1070.56377 0.76 31.14 2795 2795 MS2 13/16 Linfeng_122411_rIgG_10.raw High GLVLSGVLHK Unambiguous 2 1 IPI00307466.2 CID 1.0000 0.0000 1 1 59 2.25 0.00 0 30 25 2 511.82138 1022.63548 -0.25 29.19 2867 2867 MS2 12/18 Linfeng_122411_rIgG_6.raw IPI00169325.1 WD repeat-containing protein 36 14.72 4 12 12 17 27.20 12.09 10 10 17.03 6.20 5 7 0.00 951 105.3 7.53 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LEEGLVNNKYDTALNLLK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 319 3.35 0.00 1 11 25 3 683.03833 2047.10044 -3.25 37.50 4409 4409 MS2 30/68 Linfeng_091311_rIgG_3.raw High ILLGSEQGSLQLWNVK Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 280 3.19 0.00 0 5 25 3 595.66675 1784.98569 -2.75 40.93 4842 4842 MS2 29/60 Linfeng_091311_rIgG_3.raw High SFHTYDVQK Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 228 2.84 0.00 0 34 25 3 375.51617 1124.53397 -2.80 20.38 2112 2112 MS2 20/32 Linfeng_091311_rIgG_3.raw High YAAPEQNNDPQQSK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 106 2.80 0.00 0 9 25 2 795.36237 1589.71745 -1.03 17.42 1694 1694 MS2 22/26 Linfeng_091311_rIgG_3.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 277 2.77 0.00 0 24 25 2 637.81354 1274.61980 -2.00 27.65 3115 3115 MS2 16/22 Linfeng_091311_rIgG_3.raw High SAPFFIPTIPGLVPR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 169 2.71 0.00 0 18 25 2 806.46832 1611.92937 2.21 46.63 4914 4914 MS2 16/28 Linfeng_122411_rIgG_3.raw High IWIFDGPTGEGR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 349 2.66 0.00 0 8 25 2 674.33911 1347.67095 1.26 38.68 3886 3886 MS2 18/22 Linfeng_122411_rIgG_3.raw High LScSTWNYQK Unambiguous 4 1 IPI00169325.1 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 78 2.65 0.00 0 17 25 2 643.79236 1286.57744 -4.65 25.61 2836 2836 MS2 15/18 Linfeng_091311_rIgG_3.raw High TASALFAGFR Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 347 2.60 0.00 0 9 25 2 520.78076 1040.55425 1.76 34.60 3366 3366 MS2 17/18 Linfeng_122411_rIgG_3.raw High LEEGLVNNK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 430 2.51 0.00 0 36 25 2 508.27359 1015.53990 -1.97 21.84 2311 2311 MS2 14/16 Linfeng_091311_rIgG_3.raw High IWIFDGPTGEGR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 355 2.49 0.00 0 10 25 2 674.33746 1347.66765 -1.19 39.76 4695 4695 MS2 16/22 Linfeng_091311_rIgG_3.raw High TASALFAGFR Unambiguous 3 1 IPI00169325.1 CID 1.0000 0.0000 1 1 286 2.39 0.00 0 18 25 2 520.77814 1040.54900 -3.28 35.71 4182 4182 MS2 17/18 Linfeng_091311_rIgG_3.raw High SAPFFIPTIPGLVPR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 192 2.35 0.00 0 16 25 2 806.46918 1611.93108 3.27 46.60 5019 5019 MS2 12/28 Linfeng_122411_rIgG_4.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 349 2.28 0.00 0 18 25 2 637.81732 1274.62737 3.93 24.03 1984 1984 MS2 15/22 Linfeng_122411_rIgG_3.raw High ESGPSGIETELR Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 315 2.24 0.00 0 33 25 2 637.81702 1274.62676 3.46 23.03 1866 1866 MS2 13/22 Linfeng_122411_rIgG_3.raw High EPLLVTNGADNALR Unambiguous 4 1 IPI00169325.1 CID 1.0000 0.0000 1 1 311 2.23 0.00 0 15 25 2 741.89777 1482.78826 -1.96 31.87 3684 3684 MS2 19/26 Linfeng_091311_rIgG_3.raw High VVNLGVLAQK Unambiguous 2 1 IPI00169325.1 CID 1.0000 0.0000 1 1 147 2.19 0.00 0 11 25 2 520.82800 1040.64873 2.32 30.07 2781 2781 MS2 16/18 Linfeng_122411_rIgG_3.raw IPI00217468.3 Histone H1.5 14.60 1 3 4 6 15.35 14.60 4 6 226 22.6 10.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 391 3.39 0.00 1 44 25 3 407.88565 1221.64240 -4.13 20.99 2169 2169 MS2 28/44 Linfeng_091311_rIgG_7.raw High ALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 318 2.78 0.00 0 12 17 2 547.27789 1093.54851 -3.62 24.16 2604 2604 MS2 18/20 Linfeng_091311_rIgG_7.raw High KALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 378 2.65 0.00 1 33 25 2 611.32562 1221.64397 -2.84 21.05 2177 2177 MS2 18/22 Linfeng_091311_rIgG_7.raw High ALAAGGYDVEK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 320 2.34 0.00 0 25 25 2 547.27820 1093.54912 -3.06 24.25 2613 2613 MS2 15/20 Linfeng_091311_rIgG_9.raw High GTGASGSFK Unambiguous 6 2 IPI00217465.5;IPI00217468.3 CID 1.0000 0.0000 1 1 108 2.10 0.00 0 32 25 2 406.19971 811.39214 -2.91 13.39 1151 1151 MS2 10/16 Linfeng_091311_rIgG_6.raw High ATGPPVSELITK Unambiguous 1 1 IPI00217468.3 CID 1.0000 0.0000 1 1 328 2.10 0.00 0 7 25 2 606.84326 1212.67925 -3.50 30.71 3496 3496 MS2 17/22 Linfeng_091311_rIgG_7.raw IPI00788837.2 "cDNA FLJ54752, highly similar to Poly(rC)-binding protein 2" 14.54 8 2 3 4 9.97 14.54 3 4 0.00 282 29.7 7.71 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AITIAGIPQSIIEcVK Unambiguous 8 1 IPI00788837.2 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.02 0.00 0 23 25 2 856.98315 1712.95903 -1.50 43.69 5158 5158 MS2 16/30 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 123 2.57 0.00 0 9 25 2 644.79742 1288.58757 -5.83 22.37 2382 2382 MS2 17/20 Linfeng_091311_rIgG_6.raw High LVVPASQcGSLIGK Unambiguous 8 1 IPI00788837.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 333 2.22 0.00 0 21 25 2 714.89612 1428.78496 -2.12 30.96 3541 3541 MS2 18/26 Linfeng_091311_rIgG_6.raw High INISEGNcPER Unambiguous 9 2 IPI00788837.2;IPI00016610.2 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 145 2.15 0.00 0 6 25 2 644.79883 1288.59038 -3.65 22.53 2377 2377 MS2 15/20 Linfeng_091311_rIgG_7.raw IPI00026970.4 FACT complex subunit SPT16 14.33 1 10 10 21 25.39 8.31 6 9 21.52 9.07 6 6 17.77 6.69 5 6 1047 119.8 5.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TYALFIGDTVLVDEDGPATVLTSVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 302 5.67 0.00 0 23 25 3 875.46490 2624.38016 3.62 47.55 5032 5032 MS2 36/96 Linfeng_122411_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 13 4.25 0.00 1 8 25 3 802.99945 2406.98380 -2.76 33.29 3912 3912 MS2 35/76 Linfeng_091311_rIgG_2.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 13 4.15 0.00 1 13 25 3 803.00366 2406.99643 2.49 32.43 3088 3088 MS2 34/76 Linfeng_122411_rIgG_3.raw High NEDEEEEEEEKDEAEDLLGR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 64 4.14 0.00 1 16 100 3 803.00574 2407.00266 5.08 37.69 3712 3712 MS2 33/76 Linfeng_20120130_CHD1_2.raw High HTDVQFYTEVGEITTDLGK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 270 4.00 0.00 0 33 25 3 718.35052 2153.03702 -1.28 40.44 4780 4780 MS2 33/72 Linfeng_091311_rIgG_3.raw High NEGNIFPNPEATFVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 480 3.26 0.00 0 11 100 2 838.92102 1676.83476 4.07 45.14 5420 5420 MS2 13/28 Linfeng_20120130_CHD1_2.raw High NEGNIFPNPEATFVK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 299 3.23 0.00 0 10 25 2 838.91687 1676.82646 -0.88 36.16 3564 3564 MS2 22/28 Linfeng_122411_rIgG_3.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 340 3.01 0.00 0 6 25 2 713.35529 1425.70329 1.67 29.99 2771 2771 MS2 20/22 Linfeng_122411_rIgG_3.raw High INFYcPGSALGR Unambiguous 1 1 IPI00026970.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 2.85 0.00 0 19 25 2 677.83325 1354.65923 1.43 32.82 3138 3138 MS2 18/22 Linfeng_122411_rIgG_3.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 460 2.84 0.00 0 40 100 2 713.35602 1425.70476 2.70 35.42 3215 3215 MS2 18/22 Linfeng_20120130_CHD1_2.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 346 2.81 0.00 0 11 25 2 713.35260 1425.69792 -2.10 31.29 3604 3604 MS2 19/22 Linfeng_091311_rIgG_3.raw High YTEGVQSLNWTK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 278 2.78 0.00 0 11 25 2 713.35199 1425.69670 -2.95 31.26 3641 3641 MS2 20/22 Linfeng_091311_rIgG_2.raw High VEALTKEELEFEVPFR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 417 2.74 0.00 1 21 25 3 646.00494 1936.00028 -3.12 38.67 4558 4558 MS2 25/60 Linfeng_091311_rIgG_3.raw High AASITSEVFNK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 565 2.68 0.00 0 34 100 2 583.80811 1166.60893 3.17 31.53 2503 2503 MS2 12/20 Linfeng_20120130_CHD1_2.raw High AASITSEVFNK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 339 2.62 0.00 0 36 25 2 583.80774 1166.60820 2.55 27.70 2467 2467 MS2 16/20 Linfeng_122411_rIgG_3.raw High AASITSEVFNK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 500 2.46 0.00 0 24 100 2 583.80927 1166.61125 5.16 31.80 2547 2547 MS2 14/20 Linfeng_20120130_CHD1_2.raw High INFYcPGSALGR Unambiguous 1 1 IPI00026970.4 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 397 2.40 0.00 0 29 100 2 677.83545 1354.66362 4.68 40.27 4261 4261 MS2 13/22 Linfeng_20120130_CHD1_2.raw High ELAAQLNEEAK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 357 2.29 0.00 0 31 25 2 608.31201 1215.61675 -4.01 24.39 2701 2701 MS2 17/20 Linfeng_091311_rIgG_2.raw High YEEEEEQSR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 28 2.25 0.00 0 4 25 2 599.74548 1198.48369 -1.84 14.75 1344 1344 MS2 15/16 Linfeng_091311_rIgG_2.raw High ELAAQLNEEAK Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 362 2.16 0.00 0 10 25 2 608.31274 1215.61821 -2.80 24.46 2677 2677 MS2 18/20 Linfeng_091311_rIgG_3.raw High YEEEEEQSR Unambiguous 1 1 IPI00026970.4 CID 1.0000 0.0000 1 1 26 2.10 0.00 0 17 25 2 599.74609 1198.48491 -0.82 14.34 1258 1258 MS2 14/16 Linfeng_091311_rIgG_3.raw IPI00299904.3 Isoform 1 of DNA replication licensing factor MCM7 14.33 3 9 9 12 10.08 7.23 4 4 24.28 11.27 7 8 719 81.3 6.46 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IAQPGDHVSVTGIFLPILR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 84 4.57 0.00 0 14 25 3 678.39130 2033.15934 2.47 42.36 4484 4484 MS2 37/72 Linfeng_122411_rIgG_4.raw High SLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 189 3.59 0.00 0 36 25 3 551.65033 1652.93644 2.04 40.08 4197 4197 MS2 31/56 Linfeng_122411_rIgG_4.raw High LFADAVQELLPQYK Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 350 3.33 0.00 0 20 25 2 817.94629 1634.88530 3.91 42.97 4560 4560 MS2 19/26 Linfeng_122411_rIgG_4.raw High SITVLVEGENTR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 553 2.86 0.00 0 17 25 2 659.35565 1317.70403 2.35 28.01 2651 2651 MS2 18/22 Linfeng_122411_rIgG_4.raw High TQRPADVIFATVR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 425 2.79 0.00 0 8 25 3 491.94482 1473.81992 1.77 31.63 3129 3129 MS2 25/48 Linfeng_122411_rIgG_4.raw High RSLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 145 2.72 0.00 1 7 25 3 603.68604 1809.04355 5.17 39.06 4725 4725 MS2 30/60 Linfeng_091311_rIgG_10.raw High FDLLWLIQDRPDR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 429 2.69 0.00 0 10 25 3 562.96985 1686.89499 -0.78 47.15 5622 5622 MS2 22/48 Linfeng_091311_rIgG_3.raw High RSLEQNIQLPAALLSR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 124 2.64 0.00 1 11 25 3 603.68878 1809.05179 9.73 38.25 3713 3713 MS2 28/60 Linfeng_122411_rIgG_10.raw High LFADAVQELLPQYK Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 390 2.60 0.00 0 35 25 2 817.94244 1634.87761 -0.79 44.12 5240 5240 MS2 19/26 Linfeng_091311_rIgG_3.raw High SITVLVEGENTR Unambiguous 3 1 IPI00299904.3 CID 1.0000 0.0000 1 1 534 2.47 0.00 0 28 25 2 659.35504 1317.70281 1.42 27.89 2493 2493 MS2 17/22 Linfeng_122411_rIgG_3.raw High SQLLSYIDR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 369 2.07 0.00 0 41 25 2 547.79407 1094.58086 -2.94 33.59 3907 3907 MS2 13/16 Linfeng_091311_rIgG_3.raw High TLLAILR Unambiguous 2 1 IPI00299904.3 CID 1.0000 0.0000 1 1 92 2.01 0.00 0 14 25 2 400.27432 799.54137 1.66 35.65 3640 3640 MS2 11/12 Linfeng_122411_rIgG_4.raw IPI00394982.1 probable ATP-dependent RNA helicase DDX52 isoform b 14.26 2 4 4 6 21.36 14.26 4 6 0.00 491 55.2 9.66 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NSAVETVEQELLFVGSETGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 328 5.09 0.00 0 19 25 3 713.02563 2137.06235 -1.72 48.19 5751 5751 MS2 33/76 Linfeng_091311_rIgG_4.raw High IHVQGTDLPDPIATFQQLDQEYK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 323 4.45 0.00 0 8 25 3 886.11188 2656.32108 -1.63 44.24 5252 5252 MS2 32/88 Linfeng_091311_rIgG_4.raw High NSAVETVEQELLFVGSETGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 320 4.15 0.00 0 38 25 3 713.02618 2137.06400 -0.95 48.55 5760 5760 MS2 32/76 Linfeng_091311_rIgG_7.raw High GFNPPVLVFVQSIER Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 285 2.76 0.00 0 55 25 2 851.46930 1701.93132 -0.60 50.03 5984 5984 MS2 19/28 Linfeng_091311_rIgG_4.raw High GFNPPVLVFVQSIER Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 311 2.75 0.00 0 0 25 3 567.98206 1701.93161 -0.43 49.65 5936 5936 MS2 25/56 Linfeng_091311_rIgG_4.raw High ELLASAPTGSGK Unambiguous 2 1 IPI00394982.1 CID 1.0000 0.0000 1 1 539 2.17 0.00 0 27 25 2 565.80420 1130.60112 -3.64 23.73 2570 2570 MS2 14/22 Linfeng_091311_rIgG_4.raw IPI00020128.2 U3 small nucleolar RNA-associated protein 6 homolog 14.24 1 6 6 6 8.94 7.37 3 3 10.24 6.87 3 3 0.00 597 70.1 7.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IEDRLPELEQLER Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 362 4.16 0.00 1 28 25 3 547.29456 1639.86911 2.47 33.10 3317 3317 MS2 27/48 Linfeng_122411_rIgG_4.raw High EIYDDLQALHTDDPLTWDYVAR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 201 3.73 0.00 0 11 25 3 883.75244 2649.24277 -1.53 44.22 5250 5250 MS2 31/84 Linfeng_091311_rIgG_4.raw High ALLAVIGADSVTLK Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 107 3.31 0.00 0 27 25 2 685.91827 1370.82927 2.81 38.66 4020 4020 MS2 21/26 Linfeng_122411_rIgG_4.raw High ELEIESQTEEQPTTK Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 243 3.07 0.00 0 9 25 2 881.41992 1761.83257 -3.62 25.76 2848 2848 MS2 18/28 Linfeng_091311_rIgG_4.raw High SLQESRPFSVDFFR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 406 2.77 0.00 0 43 25 3 572.29156 1714.86014 3.10 36.96 3806 3806 MS2 22/52 Linfeng_122411_rIgG_4.raw High YLDWAYR Unambiguous 1 1 IPI00020128.2 CID 1.0000 0.0000 1 1 164 2.14 0.00 0 8 25 2 493.73904 986.47081 -2.28 33.71 3913 3913 MS2 11/12 Linfeng_091311_rIgG_4.raw IPI00942512.1 "keratin, type II cytoskeletal 3" 14.17 3 1 13 114 80.30 9.08 6 37 67.52 9.08 8 25 148.04 5.73 6 52 628 64.4 6.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High SLDLDSIIAEVR Unambiguous 2 1 IPI00942512.1 CID 1.0000 0.0000 1 1 475 3.66 0.00 0 24 25 2 665.86633 1330.72539 3.04 44.33 4374 4374 MS2 19/22 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 608 3.27 0.00 0 15 100 2 611.81952 1222.63176 0.25 31.36 3075 3075 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.19 0.00 0 3 19 2 570.27551 1139.54375 3.13 33.00 3259 3259 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LLRDYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M9(Oxidation) CID 1.0000 0.0000 1 1 551 3.03 0.00 1 28 100 2 769.40784 1537.80840 2.63 34.67 3638 3638 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 605 2.96 0.00 0 21 100 2 611.81952 1222.63176 0.25 31.41 3086 3086 MS2 15/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.74 0.00 0 18 100 2 611.81934 1222.63140 -0.05 31.85 3186 3186 MS2 16/20 Linfeng_20120130_CHD1_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 315 2.73 0.00 0 9 100 2 570.27649 1139.54570 4.84 32.48 2988 2988 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.65 0.00 0 13 100 2 570.27454 1139.54180 1.42 32.83 2406 2406 MS2 13/16 Linfeng_20120130_CHD1_7.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.64 0.00 0 9 100 2 570.27655 1139.54582 4.95 32.41 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.61 0.00 0 0 100 2 570.27588 1139.54448 3.77 32.93 3428 3428 MS2 13/16 Linfeng_20120130_CHD1_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.60 0.00 0 9 64 2 570.27197 1139.53667 -3.08 32.82 3422 3422 MS2 13/16 Linfeng_20120130_CHD1_5.raw High TAAENEFVTLKK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 430 2.56 0.00 1 6 100 2 675.86902 1350.73076 3.21 24.80 2031 2031 MS2 12/22 Linfeng_20120130_CHD1_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.56 0.00 0 0 93 2 570.27167 1139.53606 -3.62 32.73 3395 3395 MS2 14/16 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 328 2.56 0.00 0 16 100 2 570.27472 1139.54216 1.74 32.90 2444 2444 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.56 0.00 0 16 100 2 570.27594 1139.54460 3.88 32.55 2676 2676 MS2 14/16 Linfeng_20120130_CHD1_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.55 0.00 0 23 99 2 570.27155 1139.53581 -3.83 32.66 3376 3376 MS2 13/16 Linfeng_20120130_CHD1_5.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High AEAEALYQTK Unambiguous 11 3 IPI00061200.5;IPI00477227.3;IPI00942512.1 CID 1.0000 0.0000 1 1 291 2.51 0.00 0 14 25 2 562.28351 1123.55974 -2.92 22.68 2392 2392 MS2 16/18 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 12 100 2 570.27448 1139.54167 1.31 33.07 3355 3355 MS2 12/16 Linfeng_20120130_CHD1_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 300 2.45 0.00 0 30 100 2 570.27319 1139.53911 -0.94 33.08 3490 3490 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 590 2.40 0.00 0 33 100 2 611.82208 1222.63689 4.45 31.46 2783 2783 MS2 13/20 Linfeng_20120130_CHD1_1.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 585 2.37 0.00 0 40 100 2 611.82159 1222.63591 3.65 31.65 2523 2523 MS2 12/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 603 2.32 0.00 0 13 100 2 611.81995 1222.63262 0.95 31.99 3217 3217 MS2 14/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 388 2.29 0.00 0 21 25 2 611.81769 1222.62810 -2.74 30.06 3405 3405 MS2 14/20 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 34 100 2 570.27490 1139.54253 2.06 32.60 2546 2546 MS2 12/16 Linfeng_20120130_CHD1_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 363 2.28 0.00 2 15 25 2 597.80859 1194.60991 -1.22 16.06 1491 1491 MS2 14/16 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 15 100 2 570.27161 1139.53594 -3.73 32.49 3330 3330 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.22 0.00 0 17 100 2 570.27533 1139.54338 2.81 32.52 3224 3224 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 25 100 2 570.27618 1139.54509 4.31 32.40 3311 3311 MS2 12/16 Linfeng_20120130_CHD1_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 593 2.16 0.00 0 29 100 2 611.82196 1222.63664 4.25 31.51 2793 2793 MS2 14/20 Linfeng_20120130_CHD1_1.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High KYEDEINKR Unambiguous 4 3 IPI00008359.1;IPI00021304.1;IPI00942512.1 CID 1.0000 0.0000 1 1 386 2.12 0.00 2 18 25 2 597.80750 1194.60771 -3.06 16.17 1545 1545 MS2 14/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 591 2.10 0.00 0 41 100 2 611.82184 1222.63640 4.05 31.33 2898 2898 MS2 13/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High DYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M6(Oxidation) CID 1.0000 0.0000 1 1 289 2.07 0.00 0 12 100 2 578.27277 1155.53826 2.73 24.08 1615 1615 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 579 2.02 0.00 0 44 100 2 611.82172 1222.63616 3.85 32.20 2610 2610 MS2 12/20 Linfeng_20120130_CHD1_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High TAAENEFVTLK Unambiguous 9 3 IPI00942512.1;IPI00909059.5;IPI00956313.1 CID 1.0000 0.0000 1 1 377 2.00 0.00 0 38 25 2 611.81696 1222.62663 -3.94 30.00 3161 3161 MS2 14/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00293078.1 Probable ATP-dependent RNA helicase DDX27 14.07 1 12 12 17 17.71 7.79 7 7 10.34 5.40 4 4 14.46 5.78 4 6 796 89.8 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EGDREAIVAALLTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 372 3.17 0.00 1 6 25 3 505.28394 1513.83725 2.56 36.79 3643 3643 MS2 22/52 Linfeng_122411_rIgG_3.raw High EAIVAALLTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 240 3.03 0.00 0 30 25 2 528.82306 1056.63884 -2.26 39.05 4605 4605 MS2 17/18 Linfeng_091311_rIgG_3.raw High DIcAcAATGTGK Unambiguous 1 1 IPI00293078.1 C3(Carbamidomethyl); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 75 2.88 0.00 0 32 25 2 612.76965 1224.53203 -2.26 20.58 2140 2140 MS2 18/22 Linfeng_091311_rIgG_3.raw High TAAFALPVLER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 420 2.87 0.00 0 14 25 2 594.34302 1187.67876 0.34 37.92 3788 3788 MS2 17/20 Linfeng_122411_rIgG_3.raw High ALQEFDLALR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 548 2.76 0.00 0 21 100 2 588.32733 1175.64739 4.61 45.91 5111 5111 MS2 15/18 Linfeng_20120130_CHD1_3.raw High TAAFALPVLER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 384 2.71 0.00 0 10 25 2 594.34155 1187.67583 -2.12 39.05 4606 4606 MS2 19/20 Linfeng_091311_rIgG_3.raw High GKEAVVQEPER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 334 2.71 0.00 1 25 25 3 414.55350 1241.64594 -2.07 16.64 1584 1584 MS2 16/40 Linfeng_091311_rIgG_3.raw High ALQEFDLALR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 548 2.61 0.00 0 34 100 2 588.32739 1175.64751 4.72 45.82 5091 5091 MS2 14/18 Linfeng_20120130_CHD1_3.raw High TVINFTmPNTIK Unambiguous 1 1 IPI00293078.1 M7(Oxidation) CID 1.0000 0.0000 1 1 539 2.46 0.00 0 27 100 2 697.87372 1394.74016 3.79 37.18 3439 3439 MS2 17/22 Linfeng_20120130_CHD1_3.raw High AAPDILIATPGR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 251 2.25 0.00 0 42 100 2 597.84790 1194.68852 3.64 36.58 3325 3325 MS2 14/22 Linfeng_20120130_CHD1_3.raw High VLVLVPTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 16 2.20 0.00 0 39 25 2 448.79910 896.59093 -2.10 31.41 3620 3620 MS2 11/14 Linfeng_091311_rIgG_3.raw High SVFDEELTNTSK Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 371 2.20 0.00 0 57 100 2 685.32996 1369.65264 3.22 32.95 2608 2608 MS2 15/22 Linfeng_20120130_CHD1_3.raw High SVFDEELTNTSK Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 380 2.18 0.00 0 19 100 2 685.32965 1369.65203 2.78 32.68 2562 2562 MS2 16/22 Linfeng_20120130_CHD1_3.raw High AcIPVGLLGK Unambiguous 1 1 IPI00293078.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 267 2.16 0.00 0 17 25 2 514.30060 1027.59392 -2.92 33.97 3955 3955 MS2 13/18 Linfeng_091311_rIgG_3.raw High AcIPVGLLGK Unambiguous 1 1 IPI00293078.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 2.16 0.00 0 26 25 2 514.30328 1027.59929 2.30 32.71 3124 3124 MS2 11/18 Linfeng_122411_rIgG_3.raw High VLVLVPTR Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 13 2.14 0.00 0 41 25 2 448.80066 896.59404 1.37 29.64 2723 2723 MS2 11/14 Linfeng_122411_rIgG_3.raw High EAVVQEPER Unambiguous 1 1 IPI00293078.1 CID 1.0000 0.0000 1 1 259 2.02 0.00 0 10 25 2 528.76843 1056.52959 -2.35 19.12 1934 1934 MS2 12/16 Linfeng_091311_rIgG_3.raw IPI00736859.1 Isoform 4 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 14.02 4 7 7 10 19.41 11.38 5 6 12.61 10.05 4 4 756 84.7 8.78 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NYILDQTNVYGSAQR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 249 4.44 0.00 0 4 25 2 871.42700 1741.84673 -2.13 31.88 3685 3685 MS2 25/28 Linfeng_091311_rIgG_3.raw High IGWSLDScSTQLGEEPFSYGYGGTGK Unambiguous 3 1 IPI00736859.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 90 4.09 0.00 0 27 25 3 932.75641 2796.25467 3.15 41.14 4203 4203 MS2 33/100 Linfeng_122411_rIgG_3.raw High IGWSLDScSTQLGEEPFSYGYGGTGK Unambiguous 3 1 IPI00736859.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 72 4.09 0.00 0 24 25 3 932.75073 2796.23764 -2.94 41.91 4965 4965 MS2 38/100 Linfeng_091311_rIgG_3.raw High QNQFYDTQVIKQENESGYER Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 154 3.74 0.00 1 6 25 3 826.05298 2476.14438 2.74 26.70 2335 2335 MS2 23/76 Linfeng_122411_rIgG_3.raw High SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 300 3.46 0.00 0 56 25 2 1038.01575 2075.02422 0.42 50.79 6073 6073 MS2 23/36 Linfeng_091311_rIgG_3.raw High KAIVIcPTDEDLKDR Unambiguous 4 1 IPI00736859.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 408 2.78 0.00 2 17 25 3 591.64392 1772.91721 -2.25 25.16 2775 2775 MS2 19/56 Linfeng_091311_rIgG_3.raw High SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 352 2.55 0.00 0 22 25 3 692.34528 2075.02127 -1.00 50.78 6071 6071 MS2 25/72 Linfeng_091311_rIgG_3.raw Medium SSGYPLTIEGFAYLWSGAR Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 383 2.46 0.00 0 44 25 3 692.34912 2075.03281 4.56 49.57 5288 5288 MS2 21/72 Linfeng_122411_rIgG_3.raw High NcAVEFNFGQR Unambiguous 4 1 IPI00736859.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 112 2.32 0.00 0 39 25 2 671.30463 1341.60198 1.10 31.35 2948 2948 MS2 16/20 Linfeng_122411_rIgG_3.raw High QNQFYDTQVIK Unambiguous 4 1 IPI00736859.1 CID 1.0000 0.0000 1 1 346 2.09 0.00 0 51 25 2 692.34802 1383.68877 -1.14 29.38 3350 3350 MS2 14/20 Linfeng_091311_rIgG_3.raw IPI00743629.2 "Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B" 14.01 4 4 4 4 10.27 14.01 4 4 357 43.1 5.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LAEFLSEHPNVTLTISAAR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 372 2.97 0.00 0 26 25 3 690.36981 2069.09488 -3.76 37.44 4364 4364 MS2 24/72 Linfeng_091311_rIgG_7.raw High FDENYAFLHR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 174 2.76 0.00 0 9 25 3 437.87378 1311.60678 -3.75 31.37 3582 3582 MS2 20/36 Linfeng_091311_rIgG_7.raw High SNLLWDTGVFR Unambiguous 4 1 IPI00743629.2 CID 1.0000 0.0000 1 1 304 2.47 0.00 0 6 25 2 654.33990 1307.67253 -1.37 41.82 4915 4915 MS2 17/20 Linfeng_091311_rIgG_7.raw High QTYLcYEVER Unambiguous 3 1 IPI00743629.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 129 2.08 0.00 0 45 25 2 680.81226 1360.61724 -2.18 30.00 3398 3398 MS2 10/18 Linfeng_091311_rIgG_7.raw IPI00302238.3 Protein AATF 13.93 1 6 6 9 16.04 9.46 3 5 10.27 7.68 4 4 560 63.1 4.94 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 193 3.70 0.00 0 23 25 2 1021.56860 2042.12993 -1.10 46.60 5552 5552 MS2 18/34 Linfeng_091311_rIgG_3.raw High SLVGLQEELLFQYPDTR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 373 3.49 0.00 0 15 25 2 1004.52032 2008.03337 -2.63 44.91 5337 5337 MS2 17/32 Linfeng_091311_rIgG_4.raw High DLDEEIFDDDDFYHQLLR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 95 3.39 0.00 0 21 25 3 766.67749 2298.01792 -0.82 46.40 5527 5527 MS2 33/68 Linfeng_091311_rIgG_3.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 168 3.34 0.00 0 14 25 2 1021.57355 2042.13982 3.74 45.18 4840 4840 MS2 17/34 Linfeng_122411_rIgG_4.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 235 2.93 0.00 0 19 25 3 681.38141 2042.12967 -1.23 46.58 5549 5549 MS2 26/68 Linfeng_091311_rIgG_3.raw High GGPEFSSALK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 422 2.54 0.00 0 38 25 2 496.75708 992.50688 2.11 21.30 1787 1787 MS2 13/18 Linfeng_122411_rIgG_4.raw High ALLTTNQLPQPDVFPLFK Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 268 2.53 0.00 0 15 25 3 681.37872 2042.12162 -5.17 46.63 5553 5553 MS2 29/68 Linfeng_091311_rIgG_4.raw High FADFTVYR Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 372 2.28 0.00 0 27 25 2 509.75439 1018.50151 2.18 31.79 3149 3149 MS2 13/14 Linfeng_122411_rIgG_4.raw High GFGAFER Unambiguous 1 1 IPI00302238.3 CID 1.0000 0.0000 1 1 175 2.10 0.00 0 47 25 2 392.19370 783.38011 2.11 24.45 2177 2177 MS2 10/12 Linfeng_122411_rIgG_4.raw IPI00550451.1 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 13.64 3 3 3 5 17.58 13.64 3 5 0.00 330 37.5 6.33 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EIFLSQPILLELEAPLK Unambiguous 3 1 IPI00550451.1 CID 1.0000 0.0000 1 1 95 4.89 0.00 0 57 25 2 977.07092 1953.13457 1.93 51.29 6072 6072 MS2 23/32 Linfeng_091311_rIgG_7.raw High EIFLSQPILLELEAPLK Unambiguous 3 1 IPI00550451.1 CID 1.0000 0.0000 1 1 112 4.20 0.00 0 67 25 3 651.71570 1953.13254 0.90 51.20 6071 6071 MS2 31/64 Linfeng_091311_rIgG_6.raw High TFTDcFNcLPIAAIVDEK Unambiguous 3 1 IPI00550451.1 C5(Carbamidomethyl); C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 202 3.39 0.00 0 23 25 3 705.33649 2113.99491 0.72 47.12 5579 5579 MS2 26/68 Linfeng_091311_rIgG_7.raw High EIFLSQPILLELEAPLK Unambiguous 3 1 IPI00550451.1 CID 1.0000 0.0000 1 1 112 3.05 0.00 0 42 25 3 651.71594 1953.13327 1.27 51.21 6063 6063 MS2 29/64 Linfeng_091311_rIgG_7.raw High NVQLTENEIR Unambiguous 3 1 IPI00550451.1 CID 1.0000 0.0000 1 1 451 2.04 0.00 0 27 25 2 608.31683 1215.62639 -5.31 26.04 2856 2856 MS2 14/18 Linfeng_091311_rIgG_7.raw IPI00220833.1 Isoform UBF2 of Nucleolar transcription factor 1 13.34 3 7 7 9 25.92 13.34 7 9 0.00 727 84.9 5.55 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RAEEIWQQSVIGDYLAR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 377 3.43 0.00 1 9 25 3 678.68341 2034.03568 -2.32 39.45 4656 4656 MS2 33/64 Linfeng_091311_rIgG_3.raw High FLESLPEEEQQR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 313 3.42 0.00 0 19 25 3 502.24634 1504.72446 -2.27 30.28 3472 3472 MS2 23/44 Linfeng_091311_rIgG_3.raw High FREDHPDLIQNAK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 301 3.30 0.00 1 7 25 3 528.26746 1582.78781 -5.99 22.79 2442 2442 MS2 28/48 Linfeng_091311_rIgG_3.raw High FSQELLSNGELNHLPLK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 353 3.05 0.00 0 19 25 3 647.01282 1939.02390 -2.34 35.90 4206 4206 MS2 23/64 Linfeng_091311_rIgG_3.raw High HPELNISEEGITK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 405 3.01 0.00 0 21 25 3 489.58615 1466.74390 -3.21 27.10 3040 3040 MS2 28/48 Linfeng_091311_rIgG_3.raw High QLQEERPELSESELTR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 337 2.85 0.00 0 8 25 3 648.65894 1943.96225 -2.42 27.32 3071 3071 MS2 27/60 Linfeng_091311_rIgG_3.raw High FLESLPEEEQQR Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 284 2.41 0.00 0 9 25 2 752.86407 1504.72087 -4.66 30.20 3462 3462 MS2 18/22 Linfeng_091311_rIgG_3.raw High WVEISNEVR Unambiguous 2 1 IPI00220833.1 CID 1.0000 0.0000 1 1 380 2.23 0.00 0 12 25 2 566.29187 1131.57646 -2.55 29.80 3407 3407 MS2 16/16 Linfeng_091311_rIgG_3.raw High HPELNISEEGITK Unambiguous 3 1 IPI00220833.1 CID 1.0000 0.0000 1 1 319 2.22 0.00 0 7 25 2 733.87640 1466.74553 -2.10 27.11 3042 3042 MS2 18/24 Linfeng_091311_rIgG_3.raw IPI00288941.1 Nuclear receptor coactivator 5 13.30 1 4 4 4 12.75 13.30 4 4 579 65.5 9.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FDAERPVDcSVIVVNK Unambiguous 1 1 IPI00288941.1 C9(Carbamidomethyl) CID 1.0000 0.0000 1 1 343 3.53 0.00 0 21 25 3 616.64398 1847.91739 -7.96 30.29 3466 3466 MS2 31/60 Linfeng_091311_rIgG_4.raw High TQPSSQPLQSGQVLPSATPTPSAPPTSQQELQAK Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 229 3.48 0.00 0 0 25 4 872.44659 3486.76455 -1.91 31.64 3642 3642 MS2 44/198 Linfeng_091311_rIgG_4.raw High GGHPPAIQSLINLLADNR Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 333 3.08 0.00 0 11 25 3 629.34595 1886.02329 -0.57 45.30 5386 5386 MS2 25/68 Linfeng_091311_rIgG_4.raw High RKDDSYFDR Unambiguous 1 1 IPI00288941.1 CID 1.0000 0.0000 1 1 163 2.66 0.00 2 34 25 3 401.19019 1201.55600 -3.05 18.71 1864 1864 MS2 20/32 Linfeng_091311_rIgG_4.raw IPI00023126.1 WD repeat-containing protein 46 13.28 7 5 5 8 8.32 7.05 3 3 19.11 11.80 4 5 610 68.0 9.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SELLLAEEPGFLEGEDGEDTAK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 144 4.96 0.00 0 1 25 2 1175.05603 2349.10478 2.83 39.98 4185 4185 MS2 23/42 Linfeng_122411_rIgG_4.raw High SELLLAEEPGFLEGEDGEDTAK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 208 3.84 0.00 0 24 25 3 783.70648 2349.10489 2.87 39.93 4179 4179 MS2 29/84 Linfeng_122411_rIgG_4.raw High SRLEVAEAEEEETSIK Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 379 3.73 0.00 1 29 25 3 607.30371 1819.89658 2.48 26.27 2421 2421 MS2 29/60 Linfeng_122411_rIgG_4.raw High FLHSEALLAVAQNR Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 360 3.41 0.00 0 15 25 3 523.62408 1568.85770 2.09 32.42 3231 3231 MS2 27/52 Linfeng_122411_rIgG_4.raw High RYWEEETVPTTAGASPGPPR Unambiguous 4 1 IPI00023126.1 CID 1.0000 0.0000 1 1 314 3.16 0.00 1 3 25 3 734.36133 2201.06943 3.25 27.01 2519 2519 MS2 30/76 Linfeng_122411_rIgG_4.raw High FLHSEALLAVAQNR Unambiguous 7 1 IPI00023126.1 CID 1.0000 0.0000 1 1 387 3.10 0.00 0 8 25 3 523.62189 1568.85111 -2.11 33.34 3865 3865 MS2 25/52 Linfeng_091311_rIgG_4.raw High RYWEEETVPTTAGASPGPPR Unambiguous 4 1 IPI00023126.1 CID 1.0000 0.0000 1 1 278 2.82 0.00 1 5 25 3 734.35712 2201.05680 -2.49 28.48 3223 3223 MS2 24/76 Linfeng_091311_rIgG_4.raw High GTYQPLSTR Unambiguous 3 1 IPI00023126.1 CID 1.0000 0.0000 1 1 362 2.40 0.00 0 17 25 2 511.76578 1022.52428 -2.23 22.26 2362 2362 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00241841.10 "Keratin, type II cytoskeletal 79" 13.27 2 2 11 152 125.92 8.97 5 53 119.47 11.40 9 43 166.70 6.73 5 56 535 57.8 7.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 401 4.03 0.00 1 8 18 3 507.94232 1521.81241 1.95 32.00 3063 3063 MS2 28/44 Linfeng_122411_rIgG_2.raw High LLRDYQELMNVK Unambiguous 5 4 IPI00008359.1;IPI00021304.1;IPI00241841.10;IPI00942512.1 CID 1.0000 0.0000 1 1 386 4.02 0.00 1 8 25 3 507.94196 1521.81131 1.23 31.98 3029 3029 MS2 27/44 Linfeng_122411_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 416 3.99 0.00 0 21 59 2 632.35321 1263.69914 3.77 44.99 5705 5705 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 543 3.86 0.00 0 11 52 2 665.36957 1329.73186 4.34 1.80 339 339 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 421 3.86 0.00 0 24 55 2 632.35333 1263.69939 3.96 45.30 5459 5459 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.72 0.00 0 7 12 2 665.36871 1329.73015 3.05 46.87 6385 6385 MS2 19/22 Linfeng_20120130_CHD1_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 422 3.72 0.00 0 24 91 2 632.35333 1263.69939 3.96 45.14 5760 5760 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.62 0.00 0 26 100 2 632.35364 1263.70000 4.45 45.44 5007 5007 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 420 3.53 0.00 0 22 86 2 632.35352 1263.69975 4.25 45.54 5514 5514 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 558 3.51 0.00 0 11 100 2 665.36694 1329.72661 0.39 2.15 155 155 MS2 19/22 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 385 3.51 0.00 0 9 54 2 632.35333 1263.69939 3.96 46.18 5992 5992 MS2 18/20 Linfeng_20120130_CHD1_4.raw High AEAEAWYQTK Unambiguous 3 1 IPI00241841.10 CID 1.0000 0.0000 1 1 169 3.48 0.00 0 6 7 2 598.78217 1196.55705 -1.02 3.71 358 358 MS2 16/18 Linfeng_122411_rIgG_9.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 429 3.41 0.00 0 12 11 2 632.35046 1263.69365 -0.58 48.47 6533 6533 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 425 3.36 0.00 0 27 100 2 632.35303 1263.69878 3.48 44.62 5619 5619 MS2 18/20 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 437 3.31 0.00 0 31 100 2 632.35376 1263.70024 4.64 45.42 5973 5973 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.29 0.00 0 25 100 2 632.35321 1263.69914 3.77 46.91 6147 6147 MS2 18/20 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 496 3.28 0.00 0 24 25 3 443.91425 1329.72818 1.57 43.75 4705 4705 MS2 29/44 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 501 3.28 0.00 0 4 7 3 443.91373 1329.72663 0.40 43.79 4554 4554 MS2 31/44 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 298 3.26 0.00 0 29 15 2 632.35034 1263.69341 -0.77 36.00 3569 3569 MS2 18/20 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.24 0.00 0 4 10 3 443.91364 1329.72635 0.20 43.65 4902 4902 MS2 30/44 Linfeng_122411_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 559 3.23 0.00 0 26 100 2 665.36993 1329.73259 4.89 1.56 246 246 MS2 19/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 500 3.22 0.00 0 31 100 2 632.35321 1263.69914 3.77 46.09 5647 5647 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 451 3.21 0.00 0 29 100 2 632.35352 1263.69975 4.25 45.51 5995 5995 MS2 18/20 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 3.21 0.00 0 43 39 2 632.34961 1263.69194 -1.93 44.97 6304 6304 MS2 18/20 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 354 3.19 0.00 0 3 19 2 570.27551 1139.54375 3.13 33.00 3259 3259 MS2 13/16 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 523 3.15 0.00 0 21 100 2 665.36926 1329.73125 3.88 1.74 314 314 MS2 18/22 Linfeng_20120130_CHD1_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 434 3.10 0.00 0 36 100 2 632.35352 1263.69975 4.25 45.87 5594 5594 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 540 3.09 0.00 0 9 100 2 665.36859 1329.72991 2.87 1.14 181 181 MS2 18/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 430 3.07 0.00 0 4 4 2 665.36487 1329.72246 -2.73 44.52 5112 5112 MS2 20/22 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 415 3.06 0.00 0 24 62 2 632.35315 1263.69902 3.67 45.08 5727 5727 MS2 18/20 Linfeng_20120130_CHD1_1.raw High SRAEAEAWYQTK Unambiguous 1 1 IPI00241841.10 CID 1.0000 0.0000 1 1 317 3.06 0.00 1 29 25 3 480.57010 1439.69574 3.00 22.78 1699 1699 MS2 24/44 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 3.05 0.00 0 13 25 2 665.36792 1329.72856 1.86 43.73 4703 4703 MS2 19/22 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 570 3.03 0.00 0 26 100 2 665.36786 1329.72844 1.77 1.35 221 221 MS2 17/22 Linfeng_20120130_CHD1_7.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 426 3.03 0.00 0 32 100 2 632.35352 1263.69975 4.25 45.77 5079 5079 MS2 18/20 Linfeng_20120130_CHD1_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 439 3.03 0.00 0 7 3 2 665.36719 1329.72710 0.76 43.63 4900 4900 MS2 20/22 Linfeng_122411_rIgG_5.raw High LLRDYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M9(Oxidation) CID 1.0000 0.0000 1 1 551 3.03 0.00 1 28 100 2 769.40784 1537.80840 2.63 34.67 3638 3638 MS2 13/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 270 3.02 0.00 1 27 100 2 696.40076 1391.79424 3.51 41.65 5000 5000 MS2 16/22 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 309 3.00 0.00 0 6 25 2 632.35242 1263.69756 2.51 36.06 3331 3331 MS2 18/20 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 539 3.00 0.00 0 21 100 2 665.36890 1329.73052 3.33 2.23 308 308 MS2 17/22 Linfeng_20120130_CHD1_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 519 2.99 0.00 0 18 25 3 443.91455 1329.72910 2.26 43.55 4634 4634 MS2 29/44 Linfeng_122411_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.98 0.00 0 24 99 2 632.35321 1263.69914 3.77 45.63 5537 5537 MS2 18/20 Linfeng_20120130_CHD1_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.97 0.00 0 13 100 2 665.36920 1329.73113 3.79 1.73 287 287 MS2 19/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 504 2.97 0.00 0 3 7 3 443.91357 1329.72617 0.06 43.68 4533 4533 MS2 28/44 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.96 0.00 0 7 25 3 443.91208 1329.72168 -3.31 44.85 5329 5329 MS2 27/44 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 477 2.92 0.00 0 40 100 2 632.35358 1263.69988 4.35 45.74 6049 6049 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 467 2.91 0.00 0 9 25 3 443.91211 1329.72177 -3.25 44.91 5310 5310 MS2 28/44 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 457 2.91 0.00 0 38 100 2 632.35358 1263.69988 4.35 45.65 6026 6026 MS2 18/20 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 437 2.91 0.00 0 23 7 2 665.36499 1329.72270 -2.55 43.86 4155 4155 MS2 19/22 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 530 2.90 0.00 0 30 3 2 665.36566 1329.72405 -1.54 43.78 4552 4552 MS2 19/22 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 548 2.90 0.00 0 18 100 2 665.36896 1329.73064 3.42 1.85 315 315 MS2 18/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 475 2.90 0.00 0 37 100 2 632.35315 1263.69902 3.67 46.32 5700 5700 MS2 18/20 Linfeng_20120130_CHD1_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 313 2.90 0.00 0 6 25 2 632.35193 1263.69658 1.74 35.94 3536 3536 MS2 18/20 Linfeng_122411_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 515 2.89 0.00 0 23 100 2 665.37018 1329.73308 5.26 1.39 215 215 MS2 17/22 Linfeng_20120130_CHD1_10.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.89 0.00 0 12 25 2 632.35144 1263.69560 0.97 36.02 3687 3687 MS2 18/20 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 456 2.89 0.00 0 11 25 3 443.91254 1329.72306 -2.28 44.64 5373 5373 MS2 25/44 Linfeng_091311_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 468 2.88 0.00 0 23 25 2 665.36810 1329.72893 2.13 43.80 4306 4306 MS2 19/22 Linfeng_122411_rIgG_9.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 486 2.88 0.00 0 7 25 3 443.91388 1329.72708 0.75 43.77 4144 4144 MS2 28/44 Linfeng_122411_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 449 2.87 0.00 0 8 21 2 665.36780 1329.72832 1.68 43.91 4481 4481 MS2 20/22 Linfeng_122411_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 447 2.86 0.00 0 28 18 2 665.36761 1329.72795 1.40 43.54 4632 4632 MS2 19/22 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 469 2.85 0.00 0 8 23 3 443.91223 1329.72214 -2.97 44.54 5115 5115 MS2 28/44 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 365 2.85 0.00 0 18 25 2 632.35168 1263.69609 1.35 36.31 3774 3774 MS2 18/20 Linfeng_122411_rIgG_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 546 2.82 0.00 0 26 100 2 665.36877 1329.73027 3.14 0.77 90 90 MS2 18/22 Linfeng_20120130_CHD1_6.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 455 2.82 0.00 0 17 11 2 665.36688 1329.72649 0.30 43.80 4425 4425 MS2 20/22 Linfeng_122411_rIgG_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.82 0.00 0 18 7 2 665.36566 1329.72405 -1.54 44.63 5372 5372 MS2 19/22 Linfeng_091311_rIgG_2.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 488 2.81 0.00 0 7 25 3 443.91409 1329.72773 1.23 43.81 4427 4427 MS2 29/44 Linfeng_122411_rIgG_10.raw High LALDVEIATYRK Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 276 2.81 0.00 1 30 100 2 696.40100 1391.79473 3.86 41.81 5033 5033 MS2 13/22 Linfeng_20120130_CHD1_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.80 0.00 0 5 25 3 443.91241 1329.72269 -2.56 44.75 5321 5321 MS2 25/44 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 443 2.80 0.00 0 37 100 2 632.35364 1263.70000 4.45 45.83 5094 5094 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 291 2.78 0.00 0 28 19 2 632.34991 1263.69255 -1.45 35.93 3850 3850 MS2 18/20 Linfeng_122411_rIgG_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 411 2.76 0.00 0 14 16 2 665.36517 1329.72307 -2.27 44.65 5308 5308 MS2 20/22 Linfeng_091311_rIgG_3.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 512 2.74 0.00 0 9 25 2 665.36597 1329.72466 -1.08 44.87 5461 5461 MS2 20/22 Linfeng_091311_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 315 2.73 0.00 0 9 100 2 570.27649 1139.54570 4.84 32.48 2988 2988 MS2 13/16 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 426 2.73 0.00 0 16 21 2 665.36505 1329.72283 -2.46 44.98 5313 5313 MS2 20/22 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 422 2.72 0.00 0 10 11 2 665.36487 1329.72246 -2.73 44.89 5308 5308 MS2 20/22 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 450 2.72 0.00 0 31 100 2 632.35242 1263.69756 2.51 46.02 5951 5951 MS2 18/20 Linfeng_20120130_CHD1_1.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 474 2.71 0.00 0 28 25 3 443.91199 1329.72141 -3.52 45.00 5315 5315 MS2 23/44 Linfeng_091311_rIgG_7.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 414 2.71 0.00 0 22 10 2 665.36511 1329.72295 -2.36 44.74 5315 5315 MS2 19/22 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 508 2.70 0.00 0 21 72 2 665.37073 1329.73418 6.08 46.86 6306 6306 MS2 16/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 419 2.69 0.00 0 9 8 2 665.36462 1329.72197 -3.10 44.91 5298 5298 MS2 20/22 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 550 2.68 0.00 0 29 100 2 665.36908 1329.73088 3.60 11.49 1041 1041 MS2 16/22 Linfeng_20120130_CHD1_10.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 473 2.67 0.00 0 35 25 3 443.91238 1329.72260 -2.63 45.03 5420 5420 MS2 23/44 Linfeng_091311_rIgG_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 415 2.66 0.00 0 14 16 2 665.36536 1329.72344 -2.00 44.99 5414 5414 MS2 20/22 Linfeng_091311_rIgG_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.65 0.00 0 13 100 2 570.27454 1139.54180 1.42 32.83 2406 2406 MS2 13/16 Linfeng_20120130_CHD1_7.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.64 0.00 0 9 100 2 570.27655 1139.54582 4.95 32.41 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.62 0.00 0 31 25 2 632.35101 1263.69475 0.29 36.17 3448 3448 MS2 18/20 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.61 0.00 0 0 100 2 570.27588 1139.54448 3.77 32.93 3428 3428 MS2 13/16 Linfeng_20120130_CHD1_10.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.61 0.00 1 38 25 3 384.85489 1152.55011 -2.66 18.45 1828 1828 MS2 23/32 Linfeng_091311_rIgG_4.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 487 2.60 0.00 0 7 25 3 443.91418 1329.72800 1.44 43.93 4484 4484 MS2 26/44 Linfeng_122411_rIgG_8.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.60 0.00 0 9 64 2 570.27197 1139.53667 -3.08 32.82 3422 3422 MS2 13/16 Linfeng_20120130_CHD1_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 520 2.57 0.00 0 9 18 2 665.36566 1329.72405 -1.54 44.92 5306 5306 MS2 20/22 Linfeng_091311_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 324 2.56 0.00 0 0 93 2 570.27167 1139.53606 -3.62 32.73 3395 3395 MS2 14/16 Linfeng_20120130_CHD1_5.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 328 2.56 0.00 0 16 100 2 570.27472 1139.54216 1.74 32.90 2444 2444 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 359 2.56 0.00 0 16 100 2 570.27594 1139.54460 3.88 32.55 2676 2676 MS2 14/16 Linfeng_20120130_CHD1_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.55 0.00 0 23 99 2 570.27155 1139.53581 -3.83 32.66 3376 3376 MS2 13/16 Linfeng_20120130_CHD1_5.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 339 2.48 0.00 0 12 100 2 570.27448 1139.54167 1.31 33.07 3355 3355 MS2 12/16 Linfeng_20120130_CHD1_8.raw Medium NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 465 2.47 0.00 0 6 25 3 443.91205 1329.72159 -3.38 44.94 5302 5302 MS2 25/44 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 471 2.46 0.00 0 39 25 2 665.36816 1329.72905 2.23 45.03 4869 4869 MS2 17/22 Linfeng_122411_rIgG_6.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 300 2.45 0.00 0 30 100 2 570.27319 1139.53911 -0.94 33.08 3490 3490 MS2 13/16 Linfeng_20120130_CHD1_5.raw Medium NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 228 2.45 0.00 1 23 25 3 384.85492 1152.55021 -2.58 18.72 1882 1882 MS2 21/32 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 346 2.44 0.00 0 19 25 2 632.35059 1263.69390 -0.38 50.41 6032 6032 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 355 2.41 0.00 0 30 25 2 632.34906 1263.69084 -2.80 37.14 4364 4364 MS2 18/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.37 0.00 0 25 25 2 632.35071 1263.69414 -0.19 49.36 5899 5899 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.37 0.00 0 52 25 2 632.34937 1263.69145 -2.32 61.43 7200 7200 MS2 12/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 352 2.35 0.00 0 26 25 2 632.34937 1263.69145 -2.32 37.25 4370 4370 MS2 18/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.32 0.00 0 14 25 2 632.35022 1263.69316 -0.96 53.73 6396 6396 MS2 16/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 370 2.30 0.00 0 15 25 2 632.35150 1263.69573 1.06 48.33 5770 5770 MS2 17/20 Linfeng_091311_rIgG_3.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 341 2.29 0.00 0 34 100 2 570.27490 1139.54253 2.06 32.60 2546 2546 MS2 12/16 Linfeng_20120130_CHD1_3.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 317 2.26 0.00 0 36 25 2 632.35034 1263.69341 -0.77 57.97 6755 6755 MS2 17/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 321 2.23 0.00 0 15 100 2 570.27161 1139.53594 -3.73 32.49 3330 3330 MS2 13/16 Linfeng_20120130_CHD1_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.23 0.00 0 13 25 2 632.34973 1263.69219 -1.74 59.18 6850 6850 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 331 2.23 0.00 0 75 25 2 632.35059 1263.69390 -0.38 56.94 6676 6676 MS2 18/20 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 368 2.22 0.00 0 17 100 2 570.27533 1139.54338 2.81 32.52 3224 3224 MS2 13/16 Linfeng_20120130_CHD1_8.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 446 2.22 0.00 0 56 25 2 665.36871 1329.73015 3.05 45.04 4715 4715 MS2 17/22 Linfeng_122411_rIgG_2.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 342 2.21 0.00 0 25 100 2 570.27618 1139.54509 4.31 32.40 3311 3311 MS2 12/16 Linfeng_20120130_CHD1_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 333 2.21 0.00 0 50 25 2 632.34784 1263.68840 -4.73 37.22 4424 4424 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 343 2.21 0.00 0 20 25 2 632.34906 1263.69084 -2.80 37.48 4382 4382 MS2 18/20 Linfeng_091311_rIgG_6.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 216 2.17 0.00 0 5 25 2 570.27484 1139.54241 1.95 30.30 2841 2841 MS2 13/16 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 335 2.13 0.00 0 50 25 2 632.34906 1263.69084 -2.80 39.01 4594 4594 MS2 18/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 357 2.12 0.00 0 64 25 2 632.35022 1263.69316 -0.96 53.45 6357 6357 MS2 16/20 Linfeng_091311_rIgG_5.raw High NLDLDSIIAEVK Unambiguous 14 6 IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00021304.1 CID 1.0000 0.0000 1 1 434 2.11 0.00 0 40 25 2 665.36755 1329.72783 1.31 37.04 3866 3866 MS2 17/22 Linfeng_122411_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 338 2.11 0.00 0 66 25 2 632.35144 1263.69560 0.97 56.73 6779 6779 MS2 17/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 295 2.11 0.00 0 12 19 2 632.34888 1263.69048 -3.09 37.40 4163 4163 MS2 18/20 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 322 2.09 0.00 0 38 25 2 632.35284 1263.69841 3.19 53.99 6395 6395 MS2 16/20 Linfeng_091311_rIgG_3.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 350 2.09 0.00 0 45 25 2 632.35132 1263.69536 0.77 53.84 6234 6234 MS2 18/20 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 293 2.09 0.00 0 23 25 2 632.34833 1263.68938 -3.96 60.27 6953 6953 MS2 15/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 349 2.08 0.00 0 0 25 2 632.35132 1263.69536 0.77 57.74 6859 6859 MS2 18/20 Linfeng_091311_rIgG_2.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 345 2.07 0.00 0 45 25 2 632.35071 1263.69414 -0.19 51.20 6203 6203 MS2 17/20 Linfeng_091311_rIgG_2.raw High DYQELmNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 M6(Oxidation) CID 1.0000 0.0000 1 1 289 2.07 0.00 0 12 100 2 578.27277 1155.53826 2.73 24.08 1615 1615 MS2 13/16 Linfeng_20120130_CHD1_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 348 2.07 0.00 0 47 25 2 632.34949 1263.69170 -2.12 45.55 5418 5418 MS2 17/20 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 336 2.07 0.00 0 28 25 2 632.34912 1263.69097 -2.70 58.75 6943 6943 MS2 18/20 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 188 2.04 0.00 0 44 25 2 570.27173 1139.53618 -3.51 31.65 3643 3643 MS2 13/16 Linfeng_091311_rIgG_4.raw High DYQELMNVK Unambiguous 5 4 IPI00942512.1;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 225 2.03 0.00 0 43 25 2 570.27466 1139.54204 1.63 29.67 2598 2598 MS2 13/16 Linfeng_122411_rIgG_10.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 334 2.03 0.00 0 66 25 2 632.35022 1263.69316 -0.96 58.63 6763 6763 MS2 18/20 Linfeng_091311_rIgG_3.raw High NKYEDEINK Unambiguous 15 6 IPI00009867.3;IPI00220327.4;IPI00241841.10;IPI00956313.1;IPI00909059.5;IPI00554648.3 CID 1.0000 0.0000 1 1 197 2.02 0.00 1 7 25 2 576.77856 1152.54985 -2.89 18.50 1873 1873 MS2 13/16 Linfeng_091311_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High LALDVEIATYR Unambiguous 17 8 IPI00942512.1;IPI00009867.3;IPI00909059.5;IPI00956313.1;IPI00005859.5;IPI00241841.10;IPI00008359.1;IPI00021304.1 CID 1.0000 0.0000 1 1 330 2.01 0.00 0 0 25 2 632.35028 1263.69328 -0.87 51.45 6158 6158 MS2 17/20 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00300371.5 Isoform 1 of Splicing factor 3B subunit 3 13.23 2 13 13 30 20.41 5.92 6 8 31.14 7.89 8 11 36.48 4.60 4 11 1217 135.5 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High HIANYISGIQTIGHR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 377 4.22 0.00 0 9 25 3 560.63806 1679.89963 1.17 28.54 2578 2578 MS2 37/56 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 338 4.07 0.00 0 5 25 3 603.63330 1808.88535 2.17 38.99 3926 3926 MS2 28/56 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 243 3.72 0.00 0 15 25 2 904.94208 1808.87688 -2.51 39.86 4768 4768 MS2 22/28 Linfeng_091311_rIgG_2.raw High ITLETDEDmVTEIR Unambiguous 1 1 IPI00300371.5 M9(Oxidation) CID 1.0000 0.0000 1 1 396 3.60 0.00 0 10 100 2 840.90765 1680.80803 4.93 35.28 3064 3064 MS2 19/26 Linfeng_20120130_CHD1_3.raw High TPVEEVPAAIAPFQGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 399 3.55 0.00 0 25 100 2 841.45288 1681.89849 4.52 42.56 4405 4405 MS2 18/30 Linfeng_20120130_CHD1_3.raw High FLAVGLVDNTVR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 367 3.52 0.00 0 4 100 2 652.37439 1303.74150 3.51 47.56 5483 5483 MS2 20/22 Linfeng_20120130_CHD1_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 508 3.51 0.00 0 31 100 2 744.88263 1488.75798 2.61 35.98 3214 3214 MS2 20/26 Linfeng_20120130_CHD1_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 594 3.48 0.00 0 35 100 2 744.88330 1488.75932 3.51 36.10 3370 3370 MS2 19/26 Linfeng_20120130_CHD1_2.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 290 3.27 0.00 0 15 25 2 904.94604 1808.88481 1.88 39.01 3929 3929 MS2 19/28 Linfeng_122411_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 523 3.20 0.00 0 24 100 2 744.88312 1488.75896 3.26 36.19 3251 3251 MS2 18/26 Linfeng_20120130_CHD1_3.raw High FLAVGLVDNTVR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 348 3.18 0.00 0 39 100 2 652.37396 1303.74065 2.85 47.28 5419 5419 MS2 20/22 Linfeng_20120130_CHD1_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 535 3.18 0.00 0 33 100 2 744.88287 1488.75847 2.93 35.86 3189 3189 MS2 17/26 Linfeng_20120130_CHD1_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 507 3.18 0.00 0 53 100 2 744.88159 1488.75591 1.21 35.90 3197 3197 MS2 17/26 Linfeng_20120130_CHD1_3.raw High LGAVFNQVAFPLQYTPR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 353 3.12 0.00 0 15 25 3 641.01453 1921.02903 -2.13 42.89 5088 5088 MS2 31/64 Linfeng_091311_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 548 3.08 0.00 0 39 100 2 744.88251 1488.75774 2.44 36.03 3354 3354 MS2 20/26 Linfeng_20120130_CHD1_2.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 583 2.99 0.00 0 56 100 2 744.88257 1488.75786 2.52 35.92 3328 3328 MS2 18/26 Linfeng_20120130_CHD1_2.raw High FLAVGLVDNTVR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 311 2.86 0.00 0 10 25 2 652.37274 1303.73821 0.98 35.63 3496 3496 MS2 20/22 Linfeng_122411_rIgG_3.raw High NENQLIIFADDTYPR Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 308 2.84 0.00 0 22 25 3 603.63000 1808.87546 -3.29 39.88 4770 4770 MS2 26/56 Linfeng_091311_rIgG_2.raw High SVAGGFVYTYK Unambiguous 2 1 IPI00300371.5 CID 1.0000 0.0000 1 1 445 2.73 0.00 0 29 25 2 596.30762 1191.60796 2.92 29.22 2668 2668 MS2 17/20 Linfeng_122411_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 371 2.67 0.00 0 7 25 2 744.88165 1488.75603 1.29 31.34 2946 2946 MS2 22/26 Linfeng_122411_rIgG_3.raw High IVILEYQPSK Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 237 2.52 0.00 0 19 25 2 595.34576 1189.68425 1.27 30.93 2893 2893 MS2 15/18 Linfeng_122411_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 351 2.43 0.00 0 28 25 2 744.87811 1488.74895 -3.46 32.76 3840 3840 MS2 22/26 Linfeng_091311_rIgG_2.raw High DYIVVGSDSGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 239 2.34 0.00 0 17 25 2 584.28754 1167.56780 3.17 21.08 1660 1660 MS2 17/20 Linfeng_122411_rIgG_3.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 401 2.19 0.00 0 29 25 2 744.88275 1488.75823 2.77 31.45 2991 2991 MS2 21/26 Linfeng_122411_rIgG_2.raw High TVLDPVTGDLSDTR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 357 2.19 0.00 0 41 25 2 744.87848 1488.74968 -2.97 32.68 3790 3790 MS2 22/26 Linfeng_091311_rIgG_3.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 362 2.17 0.00 0 35 25 2 482.75635 964.50542 2.15 25.63 2193 2193 MS2 13/14 Linfeng_122411_rIgG_3.raw High DYIVVGSDSGR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 240 2.10 0.00 0 13 25 2 584.28748 1167.56767 3.07 20.07 1565 1565 MS2 14/20 Linfeng_122411_rIgG_3.raw High NFGDQPDIR Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 193 2.06 0.00 0 28 25 2 531.25287 1061.49846 -2.49 25.03 2791 2791 MS2 13/16 Linfeng_091311_rIgG_2.raw High FGNIcVVR Unambiguous 2 1 IPI00300371.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.03 0.00 0 13 25 2 482.75354 964.49980 -3.67 28.52 3271 3271 MS2 13/14 Linfeng_091311_rIgG_2.raw High RNDLDDPER Unambiguous 1 1 IPI00300371.5 CID 1.0000 0.0000 1 1 122 2.03 0.00 1 15 25 2 565.26459 1129.52190 -1.24 16.64 1610 1610 MS2 12/16 Linfeng_091311_rIgG_2.raw IPI00937477.1 WD repeat-containing protein 43 13.15 1 7 7 9 14.47 9.90 5 5 10.40 6.79 4 4 0.00 677 74.8 5.57 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SGGNEVSIEER Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 189 3.23 0.00 0 5 25 2 588.77704 1176.54680 -2.02 20.79 2159 2159 MS2 17/20 Linfeng_091311_rIgG_4.raw High LILLITQVTASEK Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 44 3.04 0.00 0 14 25 2 714.93964 1428.87200 3.31 39.04 4068 4068 MS2 21/24 Linfeng_122411_rIgG_4.raw High MSLLLVYGSWFQPTIER Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 392 3.03 0.00 0 23 25 3 680.69202 2040.06150 -0.43 51.25 6133 6133 MS2 23/64 Linfeng_091311_rIgG_4.raw High GDNSSVSSLcISPDGK Unambiguous 1 1 IPI00937477.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 114 2.94 0.00 0 33 25 2 811.86829 1622.72930 -2.11 28.50 3225 3225 MS2 19/30 Linfeng_091311_rIgG_4.raw High MPLHTIIPLLQELTK Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 125 2.79 0.00 0 22 25 3 583.01050 1747.01694 -1.02 46.37 5520 5520 MS2 25/56 Linfeng_091311_rIgG_4.raw High GDNSSVSSLcISPDGK Unambiguous 1 1 IPI00937477.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 116 2.67 0.00 0 4 25 2 811.87183 1622.73638 2.26 26.29 2424 2424 MS2 19/30 Linfeng_122411_rIgG_4.raw High LLNVWQVR Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 318 2.59 0.00 0 5 25 2 514.30731 1027.60735 2.51 34.43 3490 3490 MS2 13/14 Linfeng_122411_rIgG_4.raw High LLNVWQVR Unambiguous 1 1 IPI00937477.1 CID 1.0000 0.0000 1 1 209 2.47 0.00 0 7 25 2 514.30438 1027.60149 -3.20 35.74 4178 4178 MS2 13/14 Linfeng_091311_rIgG_4.raw High DISNcWAPK Unambiguous 1 1 IPI00937477.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 162 2.10 0.00 0 13 25 2 545.75385 1090.50041 1.61 27.07 2527 2527 MS2 13/16 Linfeng_122411_rIgG_4.raw IPI00954192.1 Isoform 2 of Chromodomain-helicase-DNA-binding protein 1 13.11 2 12 16 53 217.46 13.11 16 53 1709 196.5 7.14 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 474 6.15 0.00 0 18 100 3 1013.15607 3037.45365 1.68 37.47 4528 4528 MS2 37/112 Linfeng_20120130_CHD1_5.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 480 5.98 0.00 0 7 100 3 1013.15942 3037.46372 4.99 38.24 3191 3191 MS2 37/112 Linfeng_20120130_CHD1_6.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 496 5.77 0.00 0 4 100 3 1013.15894 3037.46225 4.51 37.80 3735 3735 MS2 41/112 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 484 5.74 0.00 0 6 100 3 1013.15930 3037.46335 4.87 37.74 4133 4133 MS2 46/112 Linfeng_20120130_CHD1_1.raw High GATGATTTIYAVEADGDPNAGFEK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 340 5.70 0.00 0 0 100 2 1178.55627 2356.10527 4.77 38.19 3815 3815 MS2 23/46 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 491 5.66 0.00 0 9 100 3 1013.15869 3037.46152 4.27 37.67 3708 3708 MS2 39/112 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 493 5.63 0.00 0 27 100 3 1013.15924 3037.46317 4.81 37.86 4259 4259 MS2 39/112 Linfeng_20120130_CHD1_4.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 483 5.61 0.00 0 11 100 3 1013.15833 3037.46042 3.91 37.95 4277 4277 MS2 40/112 Linfeng_20120130_CHD1_4.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 491 5.51 0.00 0 15 100 3 1013.15918 3037.46299 4.75 37.98 3157 3157 MS2 36/112 Linfeng_20120130_CHD1_6.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 482 5.47 0.00 0 7 100 3 1013.15759 3037.45823 3.18 38.02 4288 4288 MS2 37/112 Linfeng_20120130_CHD1_4.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 484 5.44 0.00 0 13 100 3 1013.15833 3037.46042 3.91 37.90 4267 4267 MS2 37/112 Linfeng_20120130_CHD1_4.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 510 5.34 0.00 0 4 100 3 1013.16003 3037.46555 5.60 37.62 4108 4108 MS2 42/112 Linfeng_20120130_CHD1_1.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 485 5.31 0.00 0 17 100 3 1013.15729 3037.45731 2.88 37.82 3137 3137 MS2 35/112 Linfeng_20120130_CHD1_6.raw High KGATGATTTIYAVEADGDPNAGFEK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 476 5.20 0.00 1 11 100 3 828.73724 2484.19718 3.29 36.19 3390 3390 MS2 39/96 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 487 5.13 0.00 0 3 100 3 1013.15900 3037.46244 4.57 38.22 3820 3820 MS2 37/112 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 486 5.12 0.00 0 33 100 3 1013.15839 3037.46061 3.97 37.89 4164 4164 MS2 40/112 Linfeng_20120130_CHD1_1.raw High GATGATTTIYAVEADGDPNAGFEK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 408 5.04 0.00 0 4 100 3 786.03998 2356.10538 4.81 38.09 3795 3795 MS2 30/92 Linfeng_20120130_CHD1_2.raw High KGATGATTTIYAVEADGDPNAGFEK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 500 5.02 0.00 1 12 100 3 828.73798 2484.19937 4.17 36.06 3362 3362 MS2 34/96 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 477 4.99 0.00 0 23 100 3 1013.15814 3037.45987 3.73 37.79 3133 3133 MS2 33/112 Linfeng_20120130_CHD1_6.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 483 4.86 0.00 0 16 100 3 1013.15741 3037.45768 3.00 37.86 3141 3141 MS2 33/112 Linfeng_20120130_CHD1_6.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 493 4.85 0.00 0 6 100 3 1013.15961 3037.46427 5.17 37.91 3588 3588 MS2 39/112 Linfeng_20120130_CHD1_3.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 494 4.59 0.00 0 3 100 3 1013.15869 3037.46152 4.27 38.10 4306 4306 MS2 41/112 Linfeng_20120130_CHD1_4.raw High NKEPGEIQYLIK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 463 4.59 0.00 1 13 100 3 477.93469 1431.78952 3.68 37.21 3607 3607 MS2 31/44 Linfeng_20120130_CHD1_2.raw High VANFSNmDEDDIELEPER Unambiguous 2 1 IPI00954192.1 M7(Oxidation) CID 1.0000 0.0000 1 1 126 4.49 0.00 0 0 100 2 1069.96594 2138.92461 2.91 35.11 3151 3151 MS2 22/34 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 476 4.43 0.00 0 76 100 3 1013.15790 3037.45914 3.49 38.16 4318 4318 MS2 35/112 Linfeng_20120130_CHD1_4.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 490 4.42 0.00 0 3 100 3 1013.15900 3037.46244 4.57 37.86 4160 4160 MS2 34/112 Linfeng_20120130_CHD1_1.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 483 4.35 0.00 0 11 100 3 1013.15741 3037.45768 3.00 37.64 3702 3702 MS2 30/112 Linfeng_20120130_CHD1_2.raw High SSVSDAPVHITASGEPVPISEESEELDQK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 493 4.26 0.00 0 20 100 3 1013.15887 3037.46207 4.45 37.93 3151 3151 MS2 35/112 Linfeng_20120130_CHD1_6.raw High VANFSNmDEDDIELEPER Unambiguous 2 1 IPI00954192.1 M7(Oxidation) CID 1.0000 0.0000 1 1 145 4.26 0.00 0 0 100 2 1069.96753 2138.92778 4.39 35.58 3251 3251 MS2 19/34 Linfeng_20120130_CHD1_2.raw High VANFSNMDEDDIELEPER Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 160 4.01 0.00 0 10 100 2 1061.96887 2122.93047 3.30 40.60 4330 4330 MS2 20/34 Linfeng_20120130_CHD1_2.raw High GNScILADEmGLGK Unambiguous 2 1 IPI00954192.1 C4(Carbamidomethyl); M10(Oxidation) CID 1.0000 0.0000 1 1 298 3.78 0.00 0 23 100 2 740.84503 1480.68279 3.82 29.69 2206 2206 MS2 18/26 Linfeng_20120130_CHD1_2.raw High GNScILADEMGLGK Unambiguous 2 1 IPI00954192.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 333 3.51 0.00 0 45 100 2 732.84778 1464.68828 4.14 41.32 4501 4501 MS2 20/26 Linfeng_20120130_CHD1_2.raw High NKEPGEIQYLIK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 442 3.40 0.00 1 19 100 2 716.39838 1431.78948 3.64 36.90 3540 3540 MS2 16/22 Linfeng_20120130_CHD1_2.raw High LVISHEEELIPLHK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 299 3.26 0.00 0 35 100 3 552.98444 1656.93875 4.08 41.48 4538 4538 MS2 22/52 Linfeng_20120130_CHD1_2.raw High GATGATTTIYAVEADGDPNAGFEK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 405 3.22 0.00 0 14 100 3 786.03949 2356.10392 4.19 38.49 3879 3879 MS2 30/92 Linfeng_20120130_CHD1_2.raw High ELEEIYmLPR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 588 3.07 0.00 0 3 100 2 654.83118 1308.65508 3.52 41.03 4430 4430 MS2 15/18 Linfeng_20120130_CHD1_2.raw High NKEPGEIQYLIK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 420 3.06 0.00 1 21 100 2 716.39850 1431.78972 3.81 37.20 3604 3604 MS2 16/22 Linfeng_20120130_CHD1_2.raw High GNScILADEmGLGK Unambiguous 2 1 IPI00954192.1 C4(Carbamidomethyl); M10(Oxidation) CID 1.0000 0.0000 1 1 284 3.04 0.00 0 32 100 2 740.84467 1480.68205 3.33 29.80 2221 2221 MS2 17/26 Linfeng_20120130_CHD1_2.raw High mVLDHLVIQR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M1(Oxidation) CID 1.0000 0.0000 1 1 346 2.91 0.00 0 32 100 2 620.35040 1239.69353 4.57 36.41 3434 3434 MS2 14/18 Linfeng_20120130_CHD1_2.raw High NWEEIIPEDQR Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 372 2.87 0.00 0 7 100 2 714.84430 1428.68132 4.11 40.68 4348 4348 MS2 15/20 Linfeng_20120130_CHD1_2.raw High LLITGTPLQNSLK Unambiguous 4 2 IPI00954192.1;IPI00023109.2 CID 1.0000 0.0000 1 1 131 2.79 0.00 0 8 100 2 699.42444 1397.84160 3.79 44.81 5342 5342 MS2 16/24 Linfeng_20120130_CHD1_2.raw High mVLDHLVIQR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M1(Oxidation) CID 1.0000 0.0000 1 1 368 2.79 0.00 0 10 100 2 620.34991 1239.69255 3.78 36.30 3410 3410 MS2 16/18 Linfeng_20120130_CHD1_2.raw High NASPEDVEYYNcQQELTDDLHK Unambiguous 2 1 IPI00954192.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 138 2.71 0.00 0 14 100 3 890.05768 2668.15848 4.36 36.96 3551 3551 MS2 21/84 Linfeng_20120130_CHD1_2.raw High ELEEIYmLPR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 594 2.67 0.00 0 30 100 2 654.83136 1308.65544 3.80 40.73 4359 4359 MS2 13/18 Linfeng_20120130_CHD1_2.raw High LVISHEEELIPLHK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 312 2.58 0.00 0 9 100 3 552.98425 1656.93821 3.74 41.84 5039 5039 MS2 21/52 Linfeng_20120130_CHD1_4.raw High GNScILADEMGLGK Unambiguous 2 1 IPI00954192.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 329 2.56 0.00 0 34 100 2 732.84796 1464.68865 4.39 41.47 4535 4535 MS2 16/26 Linfeng_20120130_CHD1_2.raw High FSSWEDFEEEHGK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 63 2.55 0.00 0 23 100 3 542.89697 1626.67636 3.44 37.84 3744 3744 MS2 20/48 Linfeng_20120130_CHD1_2.raw High GNScILADEMGLGK Unambiguous 2 1 IPI00954192.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 326 2.52 0.00 0 42 100 2 732.84857 1464.68987 5.22 41.39 4516 4516 MS2 16/26 Linfeng_20120130_CHD1_2.raw Medium FSSWEDFEEEHGK Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 66 2.46 0.00 0 25 100 3 542.89716 1626.67691 3.78 37.89 3754 3754 MS2 17/48 Linfeng_20120130_CHD1_2.raw High GSTSGFLNImmELK Unambiguous 2 1 IPI00954192.1 M10(Oxidation); M11(Oxidation) CID 1.0000 0.0000 1 1 454 2.30 0.00 0 100 2 780.37628 1559.74529 0.52 44.86 5355 5355 MS2 14/26 Linfeng_20120130_CHD1_2.raw High VLIFSQmVR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 352 2.27 0.00 0 54 100 2 554.81519 1108.62309 4.25 39.04 3992 3992 MS2 12/16 Linfeng_20120130_CHD1_2.raw High GSVEEDILER Unambiguous 2 1 IPI00954192.1 CID 1.0000 0.0000 1 1 523 2.22 0.00 0 31 100 2 573.78729 1146.56731 3.08 33.60 2875 2875 MS2 15/18 Linfeng_20120130_CHD1_2.raw High VLIFSQmVR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 350 2.01 0.00 0 54 100 2 554.81519 1108.62309 4.25 38.11 3799 3799 MS2 10/16 Linfeng_20120130_CHD1_2.raw IPI00397904.6 Nuclear pore complex protein Nup93 13.06 2 9 9 9 24.90 13.06 9 9 819 93.4 5.72 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LESLSAATTFEPLEPVKDTDIQGFLK Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 270 4.11 0.00 1 7 25 3 950.49829 2849.48032 -0.60 43.49 5162 5162 MS2 33/100 Linfeng_091311_rIgG_3.raw High LNQVcFDDDGTSSPQDR Unambiguous 2 1 IPI00397904.6 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 4.01 0.00 0 5 25 2 977.41364 1953.81999 -2.25 27.29 3066 3066 MS2 22/32 Linfeng_091311_rIgG_3.raw High NLQEIQQAGER Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 314 3.20 0.00 0 38 25 2 643.32678 1285.64629 -2.55 23.58 2554 2554 MS2 17/20 Linfeng_091311_rIgG_3.raw High EALQYFYFLR Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 457 2.78 0.00 0 7 25 2 675.34668 1349.68608 -2.07 44.16 5246 5246 MS2 16/18 Linfeng_091311_rIgG_3.raw High TSQETADVK Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 280 2.38 0.00 0 20 25 2 489.73981 978.47234 -1.57 2.98 282 282 MS2 13/16 Linfeng_091311_rIgG_3.raw High AFDIIER Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 358 2.23 0.00 0 22 25 2 432.23392 863.46056 -1.89 30.78 3538 3538 MS2 11/12 Linfeng_091311_rIgG_3.raw High AVYcIIGR Unambiguous 2 1 IPI00397904.6 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 297 2.08 0.00 0 19 25 2 476.25647 951.50566 -2.55 29.14 3318 3318 MS2 13/14 Linfeng_091311_rIgG_3.raw High ASVLLGSR Unambiguous 1 1 IPI00397904.6 CID 1.0000 0.0000 1 1 626 2.08 0.00 0 14 25 2 401.74130 802.47533 -3.54 24.02 2614 2614 MS2 12/14 Linfeng_091311_rIgG_3.raw High QALAYLEQSYK Unambiguous 2 1 IPI00397904.6 CID 1.0000 0.0000 1 1 270 2.02 0.00 0 20 25 2 657.33893 1313.67058 -2.32 31.59 3646 3646 MS2 13/20 Linfeng_091311_rIgG_3.raw IPI00031554.1 ATP-dependent RNA helicase DDX50 13.03 1 5 7 11 20.14 10.99 6 7 13.29 6.51 3 4 0.00 737 82.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 350 4.85 0.00 0 17 25 3 704.36774 2111.08866 0.26 49.56 5925 5925 MS2 43/84 Linfeng_091311_rIgG_3.raw High GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 330 4.67 0.00 0 11 25 3 704.36993 2111.09525 3.38 48.44 5145 5145 MS2 36/84 Linfeng_122411_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 255 3.55 0.00 0 5 25 2 834.90900 1668.81072 -0.54 36.17 3565 3565 MS2 20/28 Linfeng_122411_rIgG_3.raw High QNAQcLHGDIAQSQR Unambiguous 1 1 IPI00031554.1 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 184 3.04 0.00 0 29 25 3 575.93933 1725.80344 -2.99 19.07 1927 1927 MS2 21/56 Linfeng_091311_rIgG_3.raw Medium GAVDALAAALAHISGASSFEPR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 374 2.93 0.00 0 25 25 4 528.52649 2111.08413 -1.89 49.58 5928 5928 MS2 36/126 Linfeng_091311_rIgG_3.raw High EGAFSNFPISEETIK Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 290 2.73 0.00 0 29 25 2 834.91187 1668.81645 2.90 36.25 3717 3717 MS2 17/28 Linfeng_122411_rIgG_4.raw High NGIDILVGTPGR Unambiguous 3 2 IPI00015953.3;IPI00031554.1 CID 1.0000 0.0000 1 1 311 2.47 0.00 0 22 25 2 606.33905 1211.67082 -2.89 34.77 4058 4058 MS2 17/22 Linfeng_091311_rIgG_3.raw High TFSFAIPLIER Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 326 2.41 0.00 0 3 25 2 647.36249 1293.71770 -1.94 44.67 5310 5310 MS2 16/20 Linfeng_091311_rIgG_3.raw High TFSFAIPLIER Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 271 2.34 0.00 0 16 25 2 647.36572 1293.72417 3.06 43.27 4598 4598 MS2 15/20 Linfeng_122411_rIgG_4.raw High SRYEQVDLVGK Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 425 2.32 0.00 1 26 25 2 647.34033 1293.67339 -4.95 24.09 2625 2625 MS2 16/20 Linfeng_091311_rIgG_3.raw High VLVATNVAAR Unambiguous 1 1 IPI00031554.1 CID 1.0000 0.0000 1 1 266 2.13 0.00 0 36 25 2 507.30719 1013.60710 -3.12 24.17 2636 2636 MS2 17/18 Linfeng_091311_rIgG_3.raw IPI00215637.5 ATP-dependent RNA helicase DDX3X 12.54 3 6 6 9 15.39 10.73 5 5 10.56 4.98 3 4 662 73.2 7.18 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TAAFLLPILSQIYSDGPGEALR Unambiguous 2 1 IPI00215637.5 CID 1.0000 0.0000 1 1 270 5.35 0.00 0 40 25 3 778.09113 2332.25882 1.71 54.40 6455 6455 MS2 38/84 Linfeng_091311_rIgG_4.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 284 3.21 0.00 0 11 25 2 646.36401 1291.72075 -3.82 48.40 5779 5779 MS2 19/22 Linfeng_091311_rIgG_4.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 266 3.11 0.00 0 12 25 2 646.36853 1291.72978 3.17 47.35 4760 4760 MS2 18/22 Linfeng_122411_rIgG_9.raw High SFLLDLLNATGK Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 256 2.88 0.00 0 20 25 2 646.36810 1291.72893 2.51 47.21 5096 5096 MS2 16/22 Linfeng_122411_rIgG_4.raw High VRPcVVYGGADIGQQIR Unambiguous 3 1 IPI00215637.5 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 406 2.63 0.00 0 31 25 3 629.99890 1887.98215 -1.97 29.32 3336 3336 MS2 29/64 Linfeng_091311_rIgG_4.raw High YLVLDEADR Unambiguous 3 1 IPI00215637.5 CID 1.0000 0.0000 1 1 393 2.55 0.00 0 30 25 2 547.28094 1093.55461 1.97 28.52 2720 2720 MS2 15/16 Linfeng_122411_rIgG_4.raw High VGSTSENITQK Unambiguous 2 1 IPI00215637.5 CID 1.0000 0.0000 1 1 367 2.19 0.00 0 26 25 2 582.29749 1163.58769 -2.24 16.76 1590 1590 MS2 14/20 Linfeng_091311_rIgG_4.raw High YLVLDEADR Unambiguous 3 1 IPI00215637.5 CID 1.0000 0.0000 1 1 344 2.02 0.00 0 22 25 2 547.27808 1093.54888 -3.28 30.35 3474 3474 MS2 14/16 Linfeng_091311_rIgG_4.raw High SPILVATAVAAR Unambiguous 1 1 IPI00215637.5 CID 1.0000 0.0000 1 1 142 2.02 0.00 0 47 25 2 584.85724 1168.70720 1.97 30.36 2962 2962 MS2 18/22 Linfeng_122411_rIgG_4.raw IPI00641229.4 Ig alpha-2 chain C region 12.35 7 1 3 4 10.39 12.35 3 4 340 36.5 6.10 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QEPSQGTTTFAVTSILR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 414 3.28 0.00 0 21 25 3 612.65283 1835.94394 -3.21 38.10 4602 4602 MS2 25/64 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 304 2.50 0.00 0 17 25 2 607.31860 1213.62993 -2.08 29.17 3419 3419 MS2 18/18 Linfeng_091311_rIgG_10.raw High WLQGSQELPR Unambiguous 16 2 IPI00644497.4;IPI00641229.4 CID 1.0000 0.0000 1 1 301 2.49 0.00 0 5 25 2 607.31842 1213.62956 -2.38 29.37 3312 3312 MS2 17/18 Linfeng_091311_rIgG_9.raw High DASGATFTWTPSSGK Unambiguous 7 1 IPI00641229.4 CID 1.0000 0.0000 1 1 150 2.12 0.00 0 15 25 2 756.84961 1512.69194 -3.07 32.68 3894 3894 MS2 16/28 Linfeng_091311_rIgG_10.raw IPI00217862.5 U3 small nucleolar RNA-interacting protein 2 12.21 1 3 3 3 10.69 12.21 3 3 475 51.8 7.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VWNVAENSYVETLFGHQDAVAALDALSR Unambiguous 1 1 IPI00217862.5 CID 1.0000 0.0000 1 1 271 4.34 0.00 0 17 25 3 1025.84277 3075.51377 -1.11 48.80 5790 5790 MS2 31/108 Linfeng_091311_rIgG_5.raw High QLDLLcDIPLVGFINSLK Unambiguous 1 1 IPI00217862.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 253 3.80 0.00 0 15 25 3 686.71771 2058.13858 3.94 54.92 6512 6512 MS2 35/68 Linfeng_091311_rIgG_5.raw High GTHQLYSTSHDR Unambiguous 1 1 IPI00217862.5 CID 1.0000 0.0000 1 1 151 2.55 0.00 0 45 25 3 467.88834 1401.65046 -0.10 14.85 1291 1291 MS2 20/44 Linfeng_091311_rIgG_5.raw IPI00025753.2 Desmoglein-1 12.20 1 10 10 37 0.00 114.07 12.20 10 37 1049 113.7 5.03 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 492 4.40 0.00 0 11 100 2 875.92767 1750.84807 2.93 40.40 4053 4053 MS2 25/30 Linfeng_20120130_CHD1_3.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 444 4.35 0.00 0 48 100 2 875.92834 1750.84941 3.69 40.25 5165 5165 MS2 23/30 Linfeng_20120130_CHD1_5.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 444 4.30 0.00 0 9 100 2 875.92706 1750.84685 2.23 40.53 4943 4943 MS2 21/30 Linfeng_20120130_CHD1_10.raw High YVMGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 481 4.29 0.00 0 0 100 2 867.93158 1734.85588 4.53 45.62 5866 5866 MS2 23/30 Linfeng_20120130_CHD1_4.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 438 4.18 0.00 0 7 100 2 875.92908 1750.85088 4.53 40.21 4730 4730 MS2 23/30 Linfeng_20120130_CHD1_4.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 476 4.11 0.00 0 10 100 2 875.92810 1750.84892 3.41 40.37 3447 3447 MS2 23/30 Linfeng_20120130_CHD1_6.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 439 4.07 0.00 0 18 100 2 875.92761 1750.84795 2.86 40.49 3908 3908 MS2 20/30 Linfeng_20120130_CHD1_9.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 459 3.98 0.00 0 9 100 2 875.92987 1750.85246 5.44 40.17 4605 4605 MS2 22/30 Linfeng_20120130_CHD1_1.raw High TmNNFLDREQYGQYALAVR Unambiguous 1 1 IPI00025753.2 M2(Oxidation) CID 1.0000 0.0000 1 1 474 3.60 0.00 1 26 100 3 769.04199 2305.11142 3.62 43.11 3849 3849 MS2 23/72 Linfeng_20120130_CHD1_6.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 435 3.57 0.00 0 17 100 2 875.92920 1750.85112 4.67 40.43 4293 4293 MS2 22/30 Linfeng_20120130_CHD1_2.raw High YVmGNNPADLLAVDSR Unambiguous 1 1 IPI00025753.2 M3(Oxidation) CID 1.0000 0.0000 1 1 469 3.48 0.00 0 13 100 2 875.92865 1750.85002 4.04 40.54 4317 4317 MS2 19/30 Linfeng_20120130_CHD1_2.raw High YQGTILSIDDNLQR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 620 3.28 0.00 0 40 100 2 818.42401 1635.84075 4.29 42.74 5215 5215 MS2 19/26 Linfeng_20120130_CHD1_4.raw High VGDFVATDLDTGR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 511 3.27 0.00 0 11 100 2 683.33856 1365.66985 3.87 35.05 3720 3720 MS2 19/24 Linfeng_20120130_CHD1_4.raw High YQGTILSIDDNLQR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 629 3.24 0.00 0 9 100 2 818.42444 1635.84160 4.81 42.12 5092 5092 MS2 17/26 Linfeng_20120130_CHD1_4.raw High TmNNFLDREQYGQYALAVR Unambiguous 1 1 IPI00025753.2 M2(Oxidation) CID 1.0000 0.0000 1 1 449 3.07 0.00 1 42 100 3 769.04083 2305.10794 2.11 43.00 3834 3834 MS2 24/72 Linfeng_20120130_CHD1_6.raw High TmNNFLDREQYGQYALAVR Unambiguous 1 1 IPI00025753.2 M2(Oxidation) CID 1.0000 0.0000 1 1 477 3.05 0.00 1 45 100 3 769.04315 2305.11490 5.13 42.27 5038 5038 MS2 22/72 Linfeng_20120130_CHD1_1.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 430 2.94 0.00 0 5 100 2 775.37299 1549.73870 4.58 33.75 2567 2567 MS2 14/24 Linfeng_20120130_CHD1_6.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 568 2.89 0.00 1 5 100 3 619.99017 1857.95597 3.84 36.79 4066 4066 MS2 20/60 Linfeng_20120130_CHD1_4.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 549 2.86 0.00 1 7 100 3 619.99042 1857.95670 4.24 36.71 4049 4049 MS2 21/60 Linfeng_20120130_CHD1_4.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 568 2.81 0.00 1 0 100 3 619.98914 1857.95285 2.17 36.63 2990 2990 MS2 20/60 Linfeng_20120130_CHD1_6.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 417 2.79 0.00 0 6 100 2 775.37189 1549.73650 3.16 34.08 2613 2613 MS2 16/24 Linfeng_20120130_CHD1_6.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 537 2.77 0.00 1 11 100 3 619.98981 1857.95487 3.25 36.41 3989 3989 MS2 21/60 Linfeng_20120130_CHD1_4.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 549 2.72 0.00 1 9 100 3 619.99054 1857.95707 4.43 36.37 3826 3826 MS2 18/60 Linfeng_20120130_CHD1_1.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 424 2.71 0.00 0 34 100 2 775.37201 1549.73674 3.32 34.08 3506 3506 MS2 12/24 Linfeng_20120130_CHD1_4.raw High ALNSmGQDLERPLELR Unambiguous 1 1 IPI00025753.2 M5(Oxidation) CID 1.0000 0.0000 1 1 574 2.64 0.00 1 12 100 3 619.98932 1857.95340 2.46 37.32 4164 4164 MS2 19/60 Linfeng_20120130_CHD1_4.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 465 2.61 0.00 0 2 100 2 775.37274 1549.73821 4.27 33.85 2582 2582 MS2 16/24 Linfeng_20120130_CHD1_6.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 465 2.61 0.00 0 3 100 2 775.37305 1549.73882 4.66 34.03 2606 2606 MS2 15/24 Linfeng_20120130_CHD1_6.raw High VVGPISGADLHGmLEmPDLR Unambiguous 1 1 IPI00025753.2 M13(Oxidation); M16(Oxidation) CID 1.0000 0.0000 1 1 571 2.60 0.00 0 5 100 3 713.69330 2139.06534 3.70 39.78 4646 4646 MS2 22/76 Linfeng_20120130_CHD1_4.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 464 2.52 0.00 0 6 100 2 775.37286 1549.73845 4.42 33.58 2545 2545 MS2 14/24 Linfeng_20120130_CHD1_6.raw High EQYGQYALAVR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 479 2.48 0.00 0 7 100 2 649.33215 1297.65703 2.67 31.26 2252 2252 MS2 11/20 Linfeng_20120130_CHD1_6.raw High MTGFELTEGVK Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 448 2.46 0.00 0 37 100 2 606.30450 1211.60173 3.31 38.33 4349 4349 MS2 13/20 Linfeng_20120130_CHD1_4.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 424 2.44 0.00 0 9 100 2 775.37146 1549.73564 2.61 34.18 2628 2628 MS2 13/24 Linfeng_20120130_CHD1_6.raw High EQYGQYALAVR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 506 2.29 0.00 0 6 100 2 649.33228 1297.65727 2.86 31.16 2865 2865 MS2 11/20 Linfeng_20120130_CHD1_4.raw High MTGFELTEGVK Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 436 2.26 0.00 0 53 100 2 606.30518 1211.60307 4.42 38.50 4379 4379 MS2 13/20 Linfeng_20120130_CHD1_4.raw High VGDFVATDLDTGRPSTTVR Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 520 2.25 0.00 1 0 100 2 1004.01477 2007.02226 3.99 35.65 3840 3840 MS2 11/36 Linfeng_20120130_CHD1_4.raw High QEPSDSPmFIINR Unambiguous 1 1 IPI00025753.2 M8(Oxidation) CID 1.0000 0.0000 1 1 393 2.11 0.00 0 33 100 2 775.37219 1549.73711 3.56 33.99 3484 3484 MS2 12/24 Linfeng_20120130_CHD1_4.raw High MTGFELTEGVK Unambiguous 1 1 IPI00025753.2 CID 1.0000 0.0000 1 1 442 2.05 0.00 0 47 100 2 606.30450 1211.60173 3.31 38.39 4357 4357 MS2 13/20 Linfeng_20120130_CHD1_4.raw IPI00216695.1 Isoform 2 of Tyrosine-protein kinase BAZ1B 12.10 2 14 14 22 27.08 6.22 7 8 26.78 6.96 9 9 21.14 3.04 3 5 1479 170.3 8.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KSDGAcDSPSSDKENSSQIAQDHQK Unambiguous 2 1 IPI00216695.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 65 5.51 0.00 2 3 25 4 680.55219 2719.18691 0.29 15.28 1419 1419 MS2 47/144 Linfeng_091311_rIgG_2.raw High GGLGYVEETSEFEAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 311 4.70 0.00 0 23 100 2 822.38409 1643.76091 3.70 38.44 3870 3870 MS2 21/28 Linfeng_20120130_CHD1_2.raw High GGLGYVEETSEFEAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 304 4.45 0.00 0 26 100 2 822.38422 1643.76116 3.85 38.69 3919 3919 MS2 21/28 Linfeng_20120130_CHD1_2.raw High FEPQVDTEAEDmISAVK Unambiguous 2 1 IPI00216695.1 M12(Oxidation) CID 1.0000 0.0000 1 1 290 4.41 0.00 0 5 100 2 962.94916 1924.89104 3.37 35.53 3239 3239 MS2 22/32 Linfeng_20120130_CHD1_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 332 4.31 0.00 0 30 25 2 921.96948 1842.93169 0.19 50.12 6068 6068 MS2 22/28 Linfeng_091311_rIgG_2.raw High FEPQVDTEAEDmISAVK Unambiguous 2 1 IPI00216695.1 M12(Oxidation) CID 1.0000 0.0000 1 1 290 4.28 0.00 0 0 100 2 962.94794 1924.88860 2.10 35.17 3163 3163 MS2 20/32 Linfeng_20120130_CHD1_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 343 3.73 0.00 0 66 25 2 921.96893 1842.93059 -0.41 50.19 6004 6004 MS2 22/28 Linfeng_091311_rIgG_3.raw High GGLGYVEETSEFEAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 157 3.65 0.00 0 3 25 2 822.38306 1643.75884 2.44 32.24 3094 3094 MS2 22/28 Linfeng_122411_rIgG_2.raw High YQDIIHSIHLAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 411 3.49 0.00 0 12 25 4 367.20377 1465.79323 1.48 30.45 2860 2860 MS2 37/66 Linfeng_122411_rIgG_2.raw High YQDIIHSIHLAR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 468 3.33 0.00 0 10 25 4 367.20203 1465.78628 -3.26 31.63 3690 3690 MS2 32/66 Linfeng_091311_rIgG_2.raw High LQNEDKIISNVPADSLIR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 271 3.31 0.00 1 23 25 3 675.70569 2025.10251 2.43 32.43 3118 3118 MS2 25/68 Linfeng_122411_rIgG_2.raw High YAVGEEcDFEVGK Unambiguous 2 1 IPI00216695.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 130 3.29 0.00 0 21 100 2 751.82953 1502.65178 3.28 31.99 2576 2576 MS2 16/24 Linfeng_20120130_CHD1_2.raw High YWLFSDEVPGLFIEK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 350 3.08 0.00 0 26 25 2 921.97290 1842.93852 3.90 49.04 5223 5223 MS2 22/28 Linfeng_122411_rIgG_2.raw High ScDGNQELLNFLR Unambiguous 2 1 IPI00216695.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 232 3.01 0.00 0 16 25 2 783.37421 1565.74114 2.17 40.24 4105 4105 MS2 20/24 Linfeng_122411_rIgG_2.raw High FSDFLLDPYK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 320 2.97 0.00 0 22 25 2 622.81171 1244.61614 -2.95 40.50 4849 4849 MS2 16/18 Linfeng_091311_rIgG_2.raw High TEQcLVALLHK Unambiguous 2 1 IPI00216695.1 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 2.80 0.00 0 11 25 3 437.90836 1311.71051 1.17 30.95 2926 2926 MS2 24/40 Linfeng_122411_rIgG_2.raw High TDNSSLSSPLNPK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 331 2.76 0.00 0 8 25 2 680.33734 1359.66741 -5.66 25.76 2893 2893 MS2 18/24 Linfeng_091311_rIgG_2.raw High SDLIEVATR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 607 2.72 0.00 0 20 25 2 502.27536 1003.54344 1.54 27.09 2414 2414 MS2 15/16 Linfeng_122411_rIgG_2.raw High FSDFLLDPYK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 357 2.60 0.00 0 31 25 2 622.81488 1244.62248 2.15 39.53 4015 4015 MS2 15/18 Linfeng_122411_rIgG_2.raw High AFQEGIAK Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 393 2.24 0.00 0 22 25 2 432.23325 863.45922 -3.45 21.14 2243 2243 MS2 13/14 Linfeng_091311_rIgG_2.raw High SDLIEVATR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 566 2.23 0.00 0 25 25 2 502.27304 1003.53880 -3.09 29.42 3393 3393 MS2 15/16 Linfeng_091311_rIgG_2.raw High IISNVPADSLIR Unambiguous 2 1 IPI00216695.1 CID 1.0000 0.0000 1 1 264 2.12 0.00 0 29 25 2 649.37878 1297.75029 2.16 30.85 2914 2914 MS2 16/22 Linfeng_122411_rIgG_2.raw IPI00478410.2 "Isoform Liver of ATP synthase subunit gamma, mitochondrial" 12.08 1 3 3 3 7.26 12.08 3 3 298 33.0 9.22 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IYGLGSLALYEK Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 358 2.66 0.00 0 9 25 2 663.86774 1326.72820 -1.68 39.23 4589 4589 MS2 19/22 Linfeng_091311_rIgG_7.raw Medium THSDQFLVAFK Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 424 2.48 0.00 0 37 25 3 431.55817 1292.65995 -2.68 32.45 3725 3725 MS2 19/40 Linfeng_091311_rIgG_7.raw High ELIEIISGAAALD Unambiguous 1 1 IPI00478410.2 CID 1.0000 0.0000 1 1 444 2.13 0.00 0 23 25 2 657.86090 1314.71453 -0.51 47.32 5605 5605 MS2 15/24 Linfeng_091311_rIgG_7.raw IPI00003881.5 Heterogeneous nuclear ribonucleoprotein F 12.05 1 2 3 5 16.90 12.05 3 5 0.00 415 45.6 5.58 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 297 4.22 0.00 0 29 25 2 998.99023 1996.97319 -1.60 46.37 5483 5483 MS2 21/32 Linfeng_091311_rIgG_5.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 345 3.65 0.00 0 18 25 3 666.32959 1996.97422 -1.09 46.30 5486 5486 MS2 27/64 Linfeng_091311_rIgG_6.raw High ATENDIYNFFSPLNPVR Unambiguous 4 2 IPI00013881.6;IPI00003881.5 CID 1.0000 0.0000 1 1 328 3.26 0.00 0 13 25 3 666.32922 1996.97312 -1.64 46.36 5481 5481 MS2 29/64 Linfeng_091311_rIgG_5.raw High ITGEAFVQFASQELAEK Unambiguous 1 1 IPI00003881.5 CID 1.0000 0.0000 1 1 341 2.97 0.00 0 28 25 3 623.31757 1867.93814 -2.98 44.50 5247 5247 MS2 29/64 Linfeng_091311_rIgG_5.raw High HSGPNSADSANDGFVR Unambiguous 1 1 IPI00003881.5 CID 1.0000 0.0000 1 1 80 2.81 0.00 0 35 25 3 544.24408 1630.71769 -1.73 20.22 2044 2044 MS2 24/60 Linfeng_091311_rIgG_5.raw IPI00783271.1 "Leucine-rich PPR motif-containing protein, mitochondrial" 11.84 4 12 12 15 0.00 46.90 11.84 12 15 1394 157.8 6.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YAGEPVPFIEPPESFEFYAQQLR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 277 5.17 0.00 0 10 25 3 905.44641 2714.32468 4.01 46.96 4957 4957 MS2 32/88 Linfeng_122411_rIgG_3.raw High DAGIEPGPDTYLALLNAYAEK Unambiguous 4 1 IPI00783271.1 CID 1.0000 0.0000 1 1 364 4.66 0.00 0 14 25 3 741.04205 2221.11161 4.14 48.24 5120 5120 MS2 33/80 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 343 3.79 0.00 0 14 25 2 862.95001 1724.89275 4.22 49.14 5235 5235 MS2 20/30 Linfeng_122411_rIgG_2.raw High LIASYcNVGDIEGASK Unambiguous 4 1 IPI00783271.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 276 3.63 0.00 0 8 25 2 848.91693 1696.82659 3.21 30.09 2784 2784 MS2 24/30 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 407 3.19 0.00 0 24 25 3 575.63440 1724.88864 1.85 48.99 5215 5215 MS2 28/60 Linfeng_122411_rIgG_3.raw High SEAANGNLDFVLSFLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 373 3.09 0.00 0 15 25 2 862.94916 1724.89104 3.23 48.93 5207 5207 MS2 21/30 Linfeng_122411_rIgG_3.raw High VIEEQLEPAVEK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 318 3.01 0.00 0 20 25 2 692.37195 1383.73662 -0.03 4.60 519 519 MS2 19/22 Linfeng_122411_rIgG_3.raw High DYLKEAVTTLK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 240 2.97 0.00 1 27 25 3 427.57556 1280.71213 1.91 31.14 2920 2920 MS2 21/40 Linfeng_122411_rIgG_3.raw High SGGLGGSHALLLLR Unambiguous 4 1 IPI00783271.1 CID 1.0000 0.0000 1 1 155 2.80 0.00 0 13 25 3 450.93420 1350.78806 2.06 32.13 3048 3048 MS2 34/52 Linfeng_122411_rIgG_3.raw High GFTLNDAANSR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 270 2.77 0.00 0 15 25 2 583.28418 1165.56108 1.20 4.73 538 538 MS2 17/20 Linfeng_122411_rIgG_3.raw High GFTLNDAANSR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 266 2.54 0.00 0 22 25 2 583.28436 1165.56145 1.52 4.76 540 540 MS2 17/20 Linfeng_122411_rIgG_2.raw High NVQGIIEILK Unambiguous 3 1 IPI00783271.1 CID 1.0000 0.0000 1 1 197 2.49 0.00 0 10 25 2 563.84650 1126.68572 2.33 37.98 3796 3796 MS2 16/18 Linfeng_122411_rIgG_3.raw High SNTLPISLQSIR Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 426 2.33 0.00 0 16 25 2 664.88141 1328.75554 1.69 34.62 3368 3368 MS2 17/22 Linfeng_122411_rIgG_3.raw High GAYDIFLNAK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 332 2.29 0.00 0 27 25 2 556.29388 1111.58049 1.99 35.39 3465 3465 MS2 14/18 Linfeng_122411_rIgG_3.raw High LQDAINILK Unambiguous 1 1 IPI00783271.1 CID 1.0000 0.0000 1 1 331 2.18 0.00 0 13 25 2 514.31158 1027.61589 1.19 31.35 2947 2947 MS2 14/16 Linfeng_122411_rIgG_3.raw IPI00645339.2 39 kDa protein 11.63 6 4 4 4 9.63 11.63 4 4 0.00 344 38.5 9.44 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SGASVVAIR Unambiguous 6 1 IPI00645339.2 CID 1.0000 0.0000 1 1 885 2.93 0.00 0 34 25 2 430.25189 859.49651 -3.65 22.80 2438 2438 MS2 15/16 Linfeng_091311_rIgG_4.raw High GASGSFVVVQK Unambiguous 5 1 IPI00645339.2 CID 1.0000 0.0000 1 1 397 2.58 0.00 0 38 25 2 539.79639 1078.58550 -3.43 25.22 2778 2778 MS2 15/20 Linfeng_091311_rIgG_4.raw High GQLEQITGK Unambiguous 5 1 IPI00645339.2 CID 1.0000 0.0000 1 1 508 2.10 0.00 0 15 25 2 487.26755 973.52782 -3.61 23.65 2557 2557 MS2 14/16 Linfeng_091311_rIgG_4.raw High SSAVDPEPQVK Unambiguous 6 1 IPI00645339.2 CID 1.0000 0.0000 1 1 287 2.02 0.00 0 7 25 2 578.79492 1156.58257 -1.67 20.12 2065 2065 MS2 14/20 Linfeng_091311_rIgG_4.raw IPI00025491.1 Eukaryotic initiation factor 4A-I 11.58 1 3 4 4 9.96 11.58 4 4 406 46.1 5.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GIYAYGFEKPSAIQQR Unambiguous 1 2 IPI00025491.1;IPI00009328.4 CID 1.0000 0.0000 1 1 388 2.68 0.00 0 18 6 3 609.98376 1827.93674 -1.17 28.77 2865 2865 MS2 26/60 Linfeng_122411_rIgG_5.raw High ATQALVLAPTR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 212 2.47 0.00 0 53 25 2 570.84167 1140.67607 2.18 19.98 1717 1717 MS2 16/20 Linfeng_122411_rIgG_5.raw Medium KEELTLEGIR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 469 2.47 0.00 1 48 25 3 396.56006 1187.66562 2.13 21.67 1919 1919 MS2 19/36 Linfeng_122411_rIgG_5.raw High VLITTDLLAR Unambiguous 1 1 IPI00025491.1 CID 1.0000 0.0000 1 1 184 2.34 0.00 0 19 25 2 557.84576 1114.68425 1.04 35.66 3280 3280 MS2 15/18 Linfeng_122411_rIgG_9.raw IPI00793641.1 "cDNA FLJ50908, highly similar to Homo sapiens keratin protein K6irs (K6IRS2), mRNA" 11.56 4 1 6 42 51.00 9.05 4 18 64.89 7.29 4 24 0.00 398 44.7 5.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.86 0.00 0 22 25 2 738.88586 1476.76445 -3.31 28.46 3190 3190 MS2 20/22 Linfeng_091311_rIgG_9.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.73 0.00 0 41 25 2 738.88519 1476.76311 -4.22 28.32 3190 3190 MS2 20/22 Linfeng_091311_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.71 0.00 0 24 25 2 738.88623 1476.76518 -2.81 28.18 3182 3182 MS2 20/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.64 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.21 3229 3229 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 409 3.52 0.00 0 28 25 2 738.88556 1476.76384 -3.72 28.30 2931 2931 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 3.50 0.00 0 35 25 2 738.88617 1476.76506 -2.90 28.43 3152 3152 MS2 20/22 Linfeng_091311_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 412 3.49 0.00 0 30 25 2 738.88593 1476.76457 -3.23 28.38 3177 3177 MS2 20/22 Linfeng_091311_rIgG_7.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 443 3.37 0.00 0 34 25 2 738.88947 1476.77165 1.57 24.07 2225 2225 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 455 3.32 0.00 0 7 25 2 738.88947 1476.77165 1.57 23.02 2088 2088 MS2 18/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 445 3.25 0.00 0 13 25 2 738.88959 1476.77190 1.73 27.08 2585 2585 MS2 20/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.18 0.00 0 14 25 2 738.89020 1476.77312 2.56 25.27 2170 2170 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 429 3.15 0.00 0 18 25 2 738.89014 1476.77300 2.48 25.89 2370 2370 MS2 19/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 414 3.14 0.00 0 23 25 2 738.89056 1476.77385 3.05 24.49 2041 2041 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 444 3.08 0.00 0 14 25 2 738.88922 1476.77117 1.24 26.28 2306 2306 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 3.04 0.00 0 52 25 2 738.88947 1476.77165 1.57 24.24 2038 2038 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 417 3.02 0.00 0 3 25 2 738.88605 1476.76482 -3.06 29.62 3110 3110 MS2 20/22 Linfeng_091311_rIgG_1.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.99 0.00 0 9 25 2 738.89032 1476.77336 2.72 25.89 2226 2226 MS2 20/22 Linfeng_122411_rIgG_3.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 439 2.92 0.00 0 7 25 2 738.88977 1476.77226 1.98 27.13 2535 2535 MS2 17/22 Linfeng_122411_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 411 2.86 0.00 0 39 25 2 738.88611 1476.76494 -2.98 29.46 3399 3399 MS2 20/22 Linfeng_091311_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 472 2.85 0.00 0 15 25 2 738.88654 1476.76579 -2.40 29.49 3358 3358 MS2 19/22 Linfeng_091311_rIgG_4.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 420 2.84 0.00 0 17 25 2 738.89008 1476.77287 2.39 27.61 2484 2484 MS2 20/22 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 471 2.78 0.00 0 32 25 2 738.88861 1476.76995 0.41 26.06 2493 2493 MS2 20/22 Linfeng_122411_rIgG_5.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 478 2.65 0.00 0 44 25 3 492.92874 1476.77167 1.58 24.37 2055 2055 MS2 21/44 Linfeng_122411_rIgG_2.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 554 2.55 0.00 1 10 25 2 501.27451 1001.54173 4.25 2.98 287 287 MS2 13/14 Linfeng_122411_rIgG_4.raw High AQEREQIK Unambiguous 13 5 IPI00008359.1;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00942512.1 CID 1.0000 0.0000 1 1 562 2.54 0.00 1 29 25 2 501.27399 1001.54070 3.21 2.84 250 250 MS2 13/14 Linfeng_122411_rIgG_2.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 422 2.47 0.00 0 15 25 2 738.89001 1476.77275 2.31 28.54 2780 2780 MS2 16/22 Linfeng_122411_rIgG_6.raw High FLEQQNQVLETK Unambiguous 9 2 IPI00061200.5;IPI00793641.1 CID 1.0000 0.0000 1 1 448 2.34 0.00 0 10 25 2 738.88995 1476.77263 2.23 27.68 2464 2464 MS2 18/22 Linfeng_122411_rIgG_3.raw High LLESEEcR Unambiguous 5 2 IPI00061200.5;IPI00793641.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 159 2.33 0.00 0 37 25 2 518.23932 1035.47136 -6.01 19.84 1993 1993 MS2 12/14 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High AQYEEIALK Unambiguous 4 1 IPI00793641.1 CID 1.0000 0.0000 1 1 264 2.19 0.00 0 28 25 2 532.78320 1064.55913 -2.97 27.86 3108 3108 MS2 13/16 Linfeng_091311_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 186 2.12 0.00 0 6 25 2 414.21732 827.42735 -2.98 29.71 3422 3422 MS2 12/12 Linfeng_091311_rIgG_8.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 163 2.09 0.00 0 6 15 2 414.21744 827.42760 -2.69 29.77 3383 3383 MS2 12/12 Linfeng_091311_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 183 2.06 0.00 0 3 18 2 414.21753 827.42778 -2.46 29.64 3314 3314 MS2 12/12 Linfeng_091311_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 160 2.03 0.00 0 6 4 2 414.21762 827.42797 -2.24 29.54 3364 3364 MS2 12/12 Linfeng_091311_rIgG_4.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 214 2.02 0.00 0 5 3 2 414.21722 827.42717 -3.20 29.54 3099 3099 MS2 12/12 Linfeng_091311_rIgG_1.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 161 2.00 0.00 0 5 11 2 414.21756 827.42784 -2.39 29.41 3354 3354 MS2 12/12 Linfeng_091311_rIgG_3.raw IPI00455315.4 Isoform 1 of Annexin A2 11.50 2 3 3 3 0.00 0.00 8.37 11.50 3 3 339 38.6 7.75 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AEDGSVIDYELIDQDAR Unambiguous 2 1 IPI00455315.4 CID 1.0000 0.0000 1 1 330 3.26 0.00 0 17 100 2 954.94940 1908.89153 4.87 42.44 5154 5154 MS2 20/32 Linfeng_20120130_CHD1_4.raw High DALNIETAIK Unambiguous 2 1 IPI00455315.4 CID 1.0000 0.0000 1 1 810 2.77 0.00 0 36 100 2 544.30530 1087.60332 3.58 36.68 4042 4042 MS2 14/18 Linfeng_20120130_CHD1_4.raw High SYSPYDmLESIR Unambiguous 2 1 IPI00455315.4 M7(Oxidation) CID 1.0000 0.0000 1 1 234 2.34 0.00 0 27 100 2 738.83960 1476.67192 2.95 39.49 4588 4588 MS2 11/22 Linfeng_20120130_CHD1_4.raw IPI00166729.4 Zinc-alpha-2-glycoprotein 11.41 1 3 3 3 0.00 7.61 11.41 3 3 298 34.2 6.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYLEEEcPATLR Unambiguous 1 1 IPI00166729.4 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 214 2.81 0.00 0 17 25 2 726.34760 1451.68791 3.00 26.55 2342 2342 MS2 17/22 Linfeng_122411_rIgG_2.raw High QKWEAEPVYVQR Unambiguous 1 1 IPI00166729.4 CID 1.0000 0.0000 1 1 465 2.64 0.00 1 28 25 3 511.60059 1532.78720 1.01 24.97 2303 2303 MS2 20/44 Linfeng_122411_rIgG_6.raw High AGEVQEPELR Unambiguous 1 1 IPI00166729.4 CID 1.0000 0.0000 1 1 274 2.16 0.00 0 33 25 2 564.28809 1127.56890 -0.26 4.90 556 556 MS2 15/18 Linfeng_122411_rIgG_6.raw IPI00099996.2 Mitochondrial ribonuclease P protein 1 11.41 1 3 3 5 13.98 11.41 3 5 403 47.3 9.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SSVQEEcVSTISSSKDEDPLAATR Unambiguous 1 1 IPI00099996.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 364 3.54 0.00 1 10 100 3 866.07538 2596.21158 2.77 32.31 2359 2359 MS2 26/92 Linfeng_20120130_CHD1_6.raw High SSVQEEcVSTISSSKDEDPLAATR Unambiguous 1 1 IPI00099996.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 3.19 0.00 1 14 100 3 866.07550 2596.21195 2.91 32.42 2373 2373 MS2 21/92 Linfeng_20120130_CHD1_6.raw High LNLATEcLPLDK Unambiguous 1 1 IPI00099996.2 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 560 2.83 0.00 0 17 100 2 693.87048 1386.73369 2.81 41.15 3555 3555 MS2 16/22 Linfeng_20120130_CHD1_6.raw High VYVIGSFVDK Unambiguous 1 1 IPI00099996.2 CID 1.0000 0.0000 1 1 398 2.30 0.00 0 52 100 2 563.81305 1126.61882 3.99 42.74 3786 3786 MS2 12/18 Linfeng_20120130_CHD1_6.raw High VYVIGSFVDK Unambiguous 1 1 IPI00099996.2 CID 1.0000 0.0000 1 1 400 2.13 0.00 0 61 100 2 563.81238 1126.61748 2.79 43.05 3839 3839 MS2 12/18 Linfeng_20120130_CHD1_6.raw IPI00305068.5 Pre-mRNA-processing factor 6 11.37 2 9 9 9 15.49 7.65 6 6 8.55 3.72 3 3 941 106.9 8.25 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LSQVSDSVSGQTVVDPK Unambiguous 1 1 IPI00305068.5 CID 1.0000 0.0000 1 1 618 4.23 0.00 0 15 100 2 873.45282 1745.89836 3.84 25.00 1599 1599 MS2 22/32 Linfeng_20120130_CHD1_3.raw High FELQHGTEEQQEEVR Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 179 3.85 0.00 0 12 25 3 620.28870 1858.85154 -2.76 23.80 2585 2585 MS2 29/56 Linfeng_091311_rIgG_3.raw High IDSDLGDAWAFFYK Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 237 2.62 0.00 0 45 25 2 824.38800 1647.76872 -0.18 47.50 5664 5664 MS2 19/26 Linfeng_091311_rIgG_3.raw High AAQDLcEEALR Unambiguous 2 1 IPI00305068.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 189 2.45 0.00 0 44 25 2 638.29950 1275.59172 -6.37 26.54 2964 2964 MS2 16/20 Linfeng_091311_rIgG_3.raw High AAVELEEPEDAR Unambiguous 1 1 IPI00305068.5 CID 1.0000 0.0000 1 1 186 2.31 0.00 0 8 25 2 664.81738 1328.62749 -4.10 25.78 2859 2859 MS2 17/22 Linfeng_091311_rIgG_3.raw High LESENDEYER Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 45 2.22 0.00 0 11 25 2 642.27167 1283.53606 -2.03 18.70 1874 1874 MS2 14/18 Linfeng_091311_rIgG_3.raw High ESLEALLQR Unambiguous 1 1 IPI00305068.5 CID 1.0000 0.0000 1 1 731 2.20 0.00 0 39 100 2 529.79669 1058.58611 1.89 44.89 4890 4890 MS2 12/16 Linfeng_20120130_CHD1_3.raw High LEWVQDNIR Unambiguous 1 1 IPI00305068.5 CID 1.0000 0.0000 1 1 528 2.12 0.00 0 17 100 2 586.80884 1172.61040 3.84 36.96 3399 3399 MS2 15/16 Linfeng_20120130_CHD1_3.raw High WLAGDVPAAR Unambiguous 2 1 IPI00305068.5 CID 1.0000 0.0000 1 1 289 2.03 0.00 0 34 25 2 528.28418 1055.56108 -2.12 29.26 3334 3334 MS2 12/18 Linfeng_091311_rIgG_3.raw IPI00300052.1 "Keratin, type II cuticular Hb4" 11.17 2 3 7 20 53.25 11.17 7 20 600 64.9 7.74 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 381 3.57 0.00 0 6 25 2 650.36353 1299.71977 3.26 43.51 4269 4269 MS2 19/22 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 373 3.36 0.00 0 20 25 2 650.36353 1299.71977 3.26 42.13 4094 4094 MS2 19/22 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 368 3.27 0.00 0 27 25 2 650.36328 1299.71929 2.89 37.69 3536 3536 MS2 19/22 Linfeng_122411_rIgG_9.raw High LcEGVGPVNISVSSSR Unambiguous 1 1 IPI00300052.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 354 3.26 0.00 0 10 25 2 830.92236 1660.83745 3.06 29.53 2492 2492 MS2 20/30 Linfeng_122411_rIgG_9.raw High LcEGVGPVNISVSSSR Unambiguous 1 1 IPI00300052.1 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 436 3.03 0.00 0 8 25 3 554.28326 1660.83524 1.72 29.59 2501 2501 MS2 24/60 Linfeng_122411_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 343 2.82 0.00 1 12 25 3 466.58621 1397.74408 1.20 30.70 3064 3064 MS2 22/44 Linfeng_122411_rIgG_6.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 349 2.81 0.00 1 15 25 3 466.58636 1397.74454 1.53 30.47 2863 2863 MS2 26/44 Linfeng_122411_rIgG_2.raw High LGLDIEIATYR Unambiguous 6 2 IPI00922826.1;IPI00300052.1 CID 1.0000 0.0000 1 1 318 2.80 0.00 0 32 25 2 632.35175 1263.69621 1.45 38.44 3630 3630 MS2 17/20 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 437 2.80 0.00 0 18 25 3 433.91092 1299.71820 2.06 37.82 3552 3552 MS2 27/44 Linfeng_122411_rIgG_9.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 350 2.78 0.00 1 12 25 3 466.58646 1397.74482 1.73 30.44 2973 2973 MS2 23/44 Linfeng_122411_rIgG_4.raw High VAPATGDLLSTGTR Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 515 2.67 0.00 0 36 25 2 679.86865 1358.73003 1.87 26.63 2469 2469 MS2 19/26 Linfeng_122411_rIgG_4.raw High TLNNKFASFIDK Unambiguous 25 10 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5 CID 1.0000 0.0000 1 1 346 2.53 0.00 1 13 25 3 466.58612 1397.74381 1.01 29.87 2537 2537 MS2 24/44 Linfeng_122411_rIgG_9.raw High DLNLDGIIAEVK Unambiguous 1 1 IPI00300052.1 CID 1.0000 0.0000 1 1 377 2.29 0.00 0 19 25 2 650.36304 1299.71880 2.51 38.99 3697 3697 MS2 15/22 Linfeng_122411_rIgG_9.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 330 2.28 0.00 1 6 16 2 541.80365 1082.60002 0.61 27.85 2516 2516 MS2 15/16 Linfeng_122411_rIgG_2.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 258 2.21 0.00 0 11 25 2 414.21930 827.43132 1.81 26.98 2400 2400 MS2 12/12 Linfeng_122411_rIgG_2.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 326 2.20 0.00 1 8 25 2 541.80426 1082.60124 1.74 28.59 2786 2786 MS2 15/16 Linfeng_122411_rIgG_6.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 238 2.19 0.00 0 7 25 2 414.21954 827.43181 2.40 23.55 1767 1767 MS2 12/12 Linfeng_122411_rIgG_9.raw High FASFIDK Unambiguous 37 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00554648.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4 CID 1.0000 0.0000 1 1 246 2.19 0.00 0 10 25 2 414.21960 827.43193 2.55 23.93 1857 1857 MS2 12/12 Linfeng_122411_rIgG_10.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 329 2.15 0.00 1 18 25 2 541.80353 1082.59978 0.39 27.27 2656 2656 MS2 15/16 Linfeng_122411_rIgG_5.raw High FASFIDKVR Unambiguous 33 13 IPI00005859.5;IPI00008359.1;IPI00009867.3;IPI00021304.1;IPI00061200.5;IPI00793641.1;IPI00241841.10;IPI00942512.1;IPI00956313.1;IPI00300052.1;IPI00909059.5;IPI00376379.4;IPI00554648.3 CID 1.0000 0.0000 1 1 327 2.05 0.00 1 8 25 2 541.80377 1082.60027 0.84 4.75 510 510 MS2 14/16 Linfeng_122411_rIgG_9.raw IPI00012149.1 U3 small nucleolar ribonucleoprotein protein MPP10 10.72 2 5 5 5 17.39 10.72 5 5 681 78.8 4.86 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RPENSLLEETLHFDHAVR Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 349 4.34 0.00 0 24 25 4 541.52740 2163.08779 -2.98 33.59 3906 3906 MS2 36/102 Linfeng_091311_rIgG_3.raw High KPWQLQGEVTAQK Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 425 3.51 0.00 0 22 25 3 504.94144 1512.80976 -4.77 25.77 2857 2857 MS2 28/48 Linfeng_091311_rIgG_3.raw High IRDQAWDDVVR Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 353 3.35 0.00 1 48 25 3 458.23575 1372.69269 -3.04 28.13 3180 3180 MS2 24/40 Linfeng_091311_rIgG_3.raw High ATGRPEcFLTIQEGLASK Unambiguous 1 1 IPI00012149.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 3.21 0.00 0 8 25 3 660.00507 1978.00064 -2.88 33.48 3892 3892 MS2 31/68 Linfeng_091311_rIgG_3.raw High LSLAEIYEQEYIK Unambiguous 2 1 IPI00012149.1 CID 1.0000 0.0000 1 1 322 2.98 0.00 0 9 25 2 799.91724 1598.82720 -2.54 40.93 4841 4841 MS2 19/24 Linfeng_091311_rIgG_3.raw IPI00791325.1 Pumilio domain-containing protein KIAA0020 10.67 1 5 5 7 11.04 9.50 4 4 9.53 5.70 3 3 684 77.2 9.69 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAIILSSLLQScDLEVANK Unambiguous 1 1 IPI00791325.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 389 4.47 0.00 0 15 25 3 677.69958 2031.08420 2.48 42.96 4559 4559 MS2 33/72 Linfeng_122411_rIgG_4.raw High GAIILSSLLQScDLEVANK Unambiguous 1 1 IPI00791325.1 C12(Carbamidomethyl) CID 1.0000 0.0000 1 1 375 3.21 0.00 0 25 25 3 677.69690 2031.07614 -1.49 44.30 5259 5259 MS2 30/72 Linfeng_091311_rIgG_4.raw High VFLDFFTYAPPK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 396 3.02 0.00 0 8 25 2 722.87860 1444.74993 -0.86 45.98 5472 5472 MS2 19/22 Linfeng_091311_rIgG_4.raw High VFLDFFTYAPPK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 424 2.99 0.00 0 24 25 2 722.88220 1444.75713 4.12 44.62 4771 4771 MS2 18/22 Linfeng_122411_rIgG_4.raw High ELLESISPALLSYLQEHAQEVVLDK Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 221 2.56 0.00 0 21 25 3 942.16998 2824.49540 -0.92 50.01 5981 5981 MS2 26/96 Linfeng_091311_rIgG_4.raw High VLLYLLSPR Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 75 2.25 0.00 0 49 25 2 537.33820 1073.66911 -2.48 40.52 4785 4785 MS2 14/16 Linfeng_091311_rIgG_4.raw High TNYDIVVR Unambiguous 1 1 IPI00791325.1 CID 1.0000 0.0000 1 1 393 2.07 0.00 0 50 25 2 490.26495 979.52263 1.92 23.30 2022 2022 MS2 11/14 Linfeng_122411_rIgG_4.raw IPI00413173.3 Isoform Short of Antigen KI-67 10.64 2 21 21 34 20.03 4.21 8 8 31.67 7.11 13 13 34.75 3.49 5 13 2896 319.2 9.51 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High KKPNPVEEEPSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 344 3.45 0.00 1 39 25 3 470.58331 1409.73539 -2.13 14.21 1268 1268 MS2 22/44 Linfeng_091311_rIgG_2.raw High AAVGEEKDINTFVGTPVEK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 394 3.25 0.00 1 33 25 3 668.68304 2004.03458 3.02 28.48 2602 2602 MS2 29/72 Linfeng_122411_rIgG_2.raw High DINTFVGTPVEK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 656 3.24 0.00 0 29 100 2 660.34888 1319.69048 4.74 33.98 3294 3294 MS2 16/22 Linfeng_20120130_CHD1_1.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 640 3.04 0.00 0 18 100 2 595.81921 1190.63115 4.02 32.84 3064 3064 MS2 14/20 Linfeng_20120130_CHD1_1.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 675 2.96 0.00 0 23 100 2 595.81946 1190.63164 4.43 32.96 3090 3090 MS2 15/20 Linfeng_20120130_CHD1_1.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 657 2.93 0.00 0 17 100 2 595.81934 1190.63140 4.23 32.93 3082 3082 MS2 16/20 Linfeng_20120130_CHD1_1.raw Medium LTQTSGQSTHTHKEPASGDEGIK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 281 2.83 0.00 1 14 25 4 603.04700 2409.16616 0.83 14.74 1315 1315 MS2 31/132 Linfeng_091311_rIgG_3.raw High VEVKEELLAVGK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 266 2.76 0.00 1 15 25 3 438.59497 1313.77036 2.12 27.69 2495 2495 MS2 23/44 Linfeng_122411_rIgG_2.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 629 2.75 0.00 0 15 100 2 595.81946 1190.63164 4.43 32.74 3042 3042 MS2 14/20 Linfeng_20120130_CHD1_1.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 638 2.71 0.00 0 28 100 2 595.81891 1190.63054 3.51 33.18 2799 2799 MS2 14/20 Linfeng_20120130_CHD1_2.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 437 2.70 0.00 0 9 25 2 595.81714 1190.62700 0.54 29.83 2780 2780 MS2 18/20 Linfeng_122411_rIgG_2.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 554 2.67 0.00 0 19 100 2 595.81952 1190.63176 4.54 33.06 3110 3110 MS2 16/20 Linfeng_20120130_CHD1_1.raw High VLNNFISNQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 425 2.61 0.00 0 31 25 2 588.82428 1176.64128 3.48 23.64 1966 1966 MS2 15/18 Linfeng_122411_rIgG_2.raw High SPQPDPVGTPTIFKPQSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 379 2.56 0.00 0 23 25 3 642.01196 1924.02134 1.97 27.59 2482 2482 MS2 27/68 Linfeng_122411_rIgG_2.raw High LDLTENLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 648 2.56 0.00 0 28 100 2 595.81854 1190.62981 2.90 33.10 2785 2785 MS2 13/20 Linfeng_20120130_CHD1_2.raw High SPPPELTDTATSTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 270 2.53 0.00 0 28 25 2 722.86047 1444.71367 -2.06 23.28 2544 2544 MS2 17/26 Linfeng_091311_rIgG_2.raw High DIVEELSALK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 498 2.49 0.00 0 19 25 2 558.81250 1116.61772 2.67 40.81 4177 4177 MS2 15/18 Linfeng_122411_rIgG_2.raw High AQALEDLAGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 675 2.48 0.00 0 11 100 2 581.81110 1162.61492 3.94 40.94 4408 4408 MS2 13/20 Linfeng_20120130_CHD1_2.raw High SSPELEDTATSSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 145 2.44 0.00 0 24 25 2 676.31317 1351.61907 -2.47 20.05 2091 2091 MS2 18/24 Linfeng_091311_rIgG_2.raw High AQALEDLAGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 575 2.44 0.00 0 21 100 2 581.81183 1162.61638 5.20 40.67 4696 4696 MS2 14/20 Linfeng_20120130_CHD1_1.raw High SPQSDPADTPTNTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 127 2.41 0.00 0 30 25 2 729.83734 1458.66741 -2.29 16.30 1563 1563 MS2 18/26 Linfeng_091311_rIgG_2.raw High NIYAFmGTPVQK Unambiguous 2 1 IPI00413173.3 M6(Oxidation) CID 1.0000 0.0000 1 1 513 2.39 0.00 0 23 100 2 692.85327 1384.69927 4.52 32.25 2938 2938 MS2 15/22 Linfeng_20120130_CHD1_1.raw High AQALEDLAGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 596 2.38 0.00 0 7 100 2 581.81091 1162.61455 3.63 41.02 4428 4428 MS2 13/20 Linfeng_20120130_CHD1_2.raw High LDLLGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 267 2.36 0.00 0 11 25 2 563.82788 1126.64849 1.57 36.23 3598 3598 MS2 17/20 Linfeng_122411_rIgG_2.raw High QILDSAASLTGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 381 2.33 0.00 0 19 25 2 645.85059 1290.69390 2.99 28.44 2596 2596 MS2 15/24 Linfeng_122411_rIgG_2.raw High LDLLGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 354 2.21 0.00 0 57 100 2 563.82898 1126.65068 3.52 45.50 5505 5505 MS2 13/20 Linfeng_20120130_CHD1_2.raw High SPQPDPVDTPASTK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 278 2.20 0.00 0 12 25 2 720.35248 1439.69768 -2.54 20.92 2212 2212 MS2 15/26 Linfeng_091311_rIgG_2.raw High QILDPAASVTGSR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 421 2.14 0.00 0 36 25 2 657.85602 1314.70476 2.65 27.72 2499 2499 MS2 16/24 Linfeng_122411_rIgG_2.raw High AQALEELTGFR Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 492 2.13 0.00 0 20 25 2 617.82520 1234.64311 0.34 34.61 3393 3393 MS2 16/20 Linfeng_122411_rIgG_2.raw High LDLPGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 302 2.13 0.00 0 16 25 2 555.81201 1110.61675 1.20 30.56 2875 2875 MS2 15/20 Linfeng_122411_rIgG_2.raw High DINTFLGTPVQK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 464 2.12 0.00 0 40 25 2 666.86273 1332.71819 1.75 34.82 3421 3421 MS2 15/22 Linfeng_122411_rIgG_2.raw High LDLLGNLPGSK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 279 2.12 0.00 0 23 25 2 563.82422 1126.64116 -4.93 37.40 4447 4447 MS2 16/20 Linfeng_091311_rIgG_2.raw High AQALEDLAGFK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 326 2.08 0.00 0 48 25 2 581.81000 1162.61272 2.05 33.19 3214 3214 MS2 16/20 Linfeng_122411_rIgG_2.raw High DIVEELSALK Unambiguous 2 1 IPI00413173.3 CID 1.0000 0.0000 1 1 429 2.05 0.00 0 10 25 2 558.80969 1116.61211 -2.36 41.78 4755 4755 MS2 14/18 Linfeng_091311_rIgG_1.raw IPI00922826.1 "cDNA FLJ51392, highly similar to Keratin, type II cuticular Hb5" 10.51 5 2 3 3 8.19 10.51 3 3 295 32.4 5.48 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLNMDcIIAEIK Unambiguous 5 1 IPI00922826.1 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 289 3.07 0.00 0 29 25 2 717.85431 1434.70134 3.17 43.91 4681 4681 MS2 18/22 Linfeng_122411_rIgG_4.raw High LGLDIEIATYR Unambiguous 6 2 IPI00922826.1;IPI00300052.1 CID 1.0000 0.0000 1 1 318 2.80 0.00 0 32 25 2 632.35175 1263.69621 1.45 38.44 3630 3630 MS2 17/20 Linfeng_122411_rIgG_9.raw High AEAESWYR Unambiguous 5 1 IPI00922826.1 CID 1.0000 0.0000 1 1 83 2.32 0.00 0 31 25 2 506.22931 1011.45134 -1.71 4.58 536 536 MS2 13/14 Linfeng_122411_rIgG_4.raw IPI00221106.5 Splicing factor 3B subunit 2 10.50 2 8 8 8 21.52 10.50 8 8 0.00 0.00 895 100.2 5.67 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GIEKPPFELPDFIK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 452 3.13 0.00 0 14 25 3 543.96643 1629.88474 -2.47 40.78 4885 4885 MS2 24/52 Linfeng_091311_rIgG_2.raw Medium QQGDHSLKEHELLEQQK Unambiguous 1 1 IPI00221106.5 CID 1.0000 0.0000 1 1 347 2.92 0.00 1 15 25 4 512.50916 2047.01479 -2.73 20.02 2086 2086 MS2 24/96 Linfeng_091311_rIgG_2.raw High VGEPVALSEEER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 254 2.88 0.00 0 16 25 2 657.82690 1314.64653 -5.42 25.91 2914 2914 MS2 19/22 Linfeng_091311_rIgG_2.raw High KPGDLSDELR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 402 2.81 0.00 0 24 25 3 377.19864 1129.58136 -3.08 23.89 2630 2630 MS2 24/36 Linfeng_091311_rIgG_2.raw High LTIHGDLYYEGK Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 335 2.63 0.00 0 42 25 3 470.23944 1408.70377 -4.95 28.43 3258 3258 MS2 23/44 Linfeng_091311_rIgG_2.raw High LAEIGAPIQGNR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 285 2.56 0.00 0 45 25 2 619.84393 1238.68059 -3.75 27.35 3112 3112 MS2 17/22 Linfeng_091311_rIgG_2.raw High TEEEEIDR Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 74 2.39 0.00 0 19 25 2 510.72617 1020.44505 -2.95 17.33 1706 1706 MS2 13/14 Linfeng_091311_rIgG_2.raw High AAVLLEQER Unambiguous 2 1 IPI00221106.5 CID 1.0000 0.0000 1 1 474 2.20 0.00 0 3 16 2 514.78650 1028.56572 -7.60 25.33 2835 2835 MS2 14/16 Linfeng_091311_rIgG_2.raw IPI00910934.2 Isoform 5 of Putative oxidoreductase GLYR1 10.38 5 4 4 5 14.68 10.38 4 5 472 51.5 8.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TAEKcDLFIQEGAR Unambiguous 3 1 IPI00910934.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 315 4.06 0.00 1 28 25 3 546.60468 1637.79947 2.57 22.15 1883 1883 MS2 28/52 Linfeng_122411_rIgG_4.raw High TSFFLGEVGNAAK Unambiguous 5 1 IPI00910934.2 CID 1.0000 0.0000 1 1 351 3.37 0.00 0 27 25 2 670.84692 1340.68657 1.50 34.70 3523 3523 MS2 19/24 Linfeng_122411_rIgG_4.raw High TAEKcDLFIQEGAR Unambiguous 3 1 IPI00910934.2 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 313 2.80 0.00 1 33 25 3 546.60437 1637.79856 2.01 23.17 2004 2004 MS2 25/52 Linfeng_122411_rIgG_4.raw High ALDQSDNDMSAVYR Unambiguous 5 1 IPI00910934.2 CID 1.0000 0.0000 1 1 96 2.29 0.00 0 11 25 2 792.85425 1584.70122 3.34 25.80 2358 2358 MS2 18/26 Linfeng_122411_rIgG_4.raw High LGDLVWGK Unambiguous 4 1 IPI00910934.2 CID 1.0000 0.0000 1 1 780 2.16 0.00 0 23 25 2 444.25397 887.50066 2.34 31.92 3165 3165 MS2 13/14 Linfeng_122411_rIgG_4.raw IPI00552978.1 Cohesin subunit SA-2 10.15 2 8 8 11 13.11 6.26 4 4 26.19 8.04 6 7 1231 141.2 5.43 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLEDFLQEGEEPDEDDAYQVLSTLKR Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 195 5.42 0.00 1 9 25 3 1018.16272 3052.47361 3.32 44.52 4643 4643 MS2 34/100 Linfeng_122411_rIgG_3.raw High ELQENQDEIENMMNAIFK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 141 4.52 0.00 0 19 25 3 732.67273 2196.00364 4.00 49.45 5274 5274 MS2 35/68 Linfeng_122411_rIgG_3.raw High EPNPQGESHPPLNLAFLDILSEFSSK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 256 4.36 0.00 0 39 25 3 956.14545 2866.42179 -1.43 52.18 6326 6326 MS2 23/100 Linfeng_091311_rIgG_2.raw High ITELFAVALPQLLAK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 55 4.05 0.00 0 28 25 2 813.99829 1626.98931 3.88 47.56 5034 5034 MS2 21/28 Linfeng_122411_rIgG_3.raw High LLEDFLQEGEEPDEDDAYQVLSTLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 197 3.82 0.00 0 31 25 3 966.12689 2896.36612 1.30 48.61 5805 5805 MS2 30/96 Linfeng_091311_rIgG_3.raw High VFcQIcQHYLTNVNTTVK Unambiguous 2 1 IPI00552978.1 C3(Carbamidomethyl); C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 294 3.54 0.00 0 4 25 3 742.36774 2225.08866 1.99 30.72 2864 2864 MS2 27/68 Linfeng_122411_rIgG_3.raw High ANERLELLLQK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 222 3.23 0.00 1 30 25 3 442.93033 1326.77643 1.80 29.91 2760 2760 MS2 24/40 Linfeng_122411_rIgG_3.raw High ITELFAVALPQLLAK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 78 2.86 0.00 0 11 25 3 542.99860 1626.98124 -1.08 48.96 5921 5921 MS2 26/56 Linfeng_091311_rIgG_2.raw Medium LLEDFLQEGEEPDEDDAYQVLSTLKR Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 198 2.77 0.00 1 10 25 4 763.87421 3052.47500 3.78 44.54 4645 4645 MS2 41/150 Linfeng_122411_rIgG_3.raw High FALTFGLDQLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 262 2.66 0.00 0 13 25 2 626.85162 1252.69597 1.84 42.01 4316 4316 MS2 17/20 Linfeng_122411_rIgG_3.raw High FALTFGLDQLK Unambiguous 2 1 IPI00552978.1 CID 1.0000 0.0000 1 1 276 2.07 0.00 0 5 25 2 626.84869 1252.69011 -2.83 43.10 5179 5179 MS2 17/20 Linfeng_091311_rIgG_2.raw IPI00784295.2 Isoform 1 of Heat shock protein HSP 90-alpha 10.11 4 4 7 9 22.11 10.11 7 9 0.00 0.00 732 84.6 5.02 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ADLINNLGTIAK Unambiguous 5 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 373 2.90 0.00 0 12 21 2 621.85437 1242.70146 -3.08 34.74 4055 4055 MS2 18/22 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 68 2.68 0.00 0 8 25 2 656.28705 1311.56682 -2.40 25.33 2765 2765 MS2 14/18 Linfeng_091311_rIgG_7.raw High DQVANSAFVER Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 302 2.63 0.00 0 46 25 2 618.30029 1235.59331 -6.67 25.47 2817 2817 MS2 16/20 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 67 2.62 0.00 0 9 25 2 656.28754 1311.56780 -1.65 24.93 2742 2742 MS2 16/18 Linfeng_091311_rIgG_3.raw High LGIHEDSQNR Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 292 2.53 0.00 0 21 25 3 390.19437 1168.56855 -1.73 16.82 1610 1610 MS2 20/36 Linfeng_091311_rIgG_3.raw High EDQTEYLEER Unambiguous 4 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 64 2.38 0.00 0 15 25 2 656.28754 1311.56780 -1.65 25.30 2759 2759 MS2 14/18 Linfeng_091311_rIgG_9.raw High ELISNSSDALDK Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 323 2.17 0.00 0 67 25 2 646.31921 1291.63115 -5.04 25.97 2885 2885 MS2 16/22 Linfeng_091311_rIgG_3.raw High YIDQEELNK Unambiguous 6 2 IPI00784295.2;IPI00414676.6 CID 1.0000 0.0000 1 1 238 2.12 0.00 0 40 25 2 576.28137 1151.55547 -2.14 22.64 2421 2421 MS2 14/16 Linfeng_091311_rIgG_3.raw High HIYYITGETK Unambiguous 3 1 IPI00784295.2 CID 1.0000 0.0000 1 1 334 2.07 0.00 0 4 25 2 612.81433 1224.62139 -3.71 23.99 2611 2611 MS2 15/18 Linfeng_091311_rIgG_3.raw IPI00797471.3 42 kDa protein 10.11 4 2 3 8 26.98 10.11 3 8 366 41.6 5.53 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 421 4.20 0.00 0 2 1 2 639.35785 1277.70842 -1.26 48.55 6564 6564 MS2 18/20 Linfeng_20120130_CHD1_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 380 3.89 0.00 0 2 2 2 639.35907 1277.71086 0.65 48.55 5741 5741 MS2 18/20 Linfeng_20120130_CHD1_3.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 383 3.76 0.00 0 0 1 2 639.35828 1277.70928 -0.59 48.53 7240 7240 MS2 18/20 Linfeng_20120130_CHD1_5.raw High TAEEQGELAFQDAK Unambiguous 4 1 IPI00797471.3 CID 1.0000 0.0000 1 1 339 3.76 0.00 0 46 100 2 768.86548 1536.72368 3.88 26.62 1975 1975 MS2 19/26 Linfeng_20120130_CHD1_4.raw High TAEEQGELAFQDAK Unambiguous 4 1 IPI00797471.3 CID 1.0000 0.0000 1 1 304 3.64 0.00 0 42 100 2 768.86517 1536.72307 3.48 27.13 2075 2075 MS2 19/26 Linfeng_20120130_CHD1_4.raw High LAQLEAALQQAK Unambiguous 4 1 IPI00797471.3 CID 1.0000 0.0000 1 1 287 2.98 0.00 0 28 100 2 642.37122 1283.73516 2.58 37.65 4221 4221 MS2 17/22 Linfeng_20120130_CHD1_4.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 463 2.48 0.00 0 1 2 2 639.35834 1277.70940 -0.50 48.56 6618 6618 MS2 14/20 Linfeng_20120130_CHD1_1.raw High LALDIEIATYR Unambiguous 12 3 IPI00220327.4;IPI00797471.3;IPI00554648.3 CID 1.0000 0.0000 1 2 436 2.26 0.00 0 0 1 2 639.35822 1277.70915 -0.69 48.57 6280 6280 MS2 14/20 Linfeng_20120130_CHD1_2.raw IPI00007928.4 Pre-mRNA-processing-splicing factor 8 9.98 1 18 18 28 30.01 3.51 6 10 55.16 9.51 17 18 0.00 2335 273.4 8.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TNHIYVSSDDIKETGYTYILPK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 327 4.60 0.00 1 46 25 4 640.07642 2557.28383 0.67 32.78 3162 3162 MS2 41/126 Linfeng_122411_rIgG_2.raw High SQEPLPDDDEEFELPEFVEPFLK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 205 4.47 0.00 0 2 25 3 917.10138 2749.28958 4.64 50.10 5354 5354 MS2 28/88 Linfeng_122411_rIgG_2.raw High YIQPWESEFIDSQR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 226 4.12 0.00 0 13 25 3 599.95441 1797.84867 2.43 38.03 3826 3826 MS2 30/52 Linfeng_122411_rIgG_2.raw High SQEPLPDDDEEFELPEFVEPFLK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 199 3.97 0.00 0 52 25 3 917.09790 2749.27915 0.84 51.29 6214 6214 MS2 32/88 Linfeng_091311_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 257 3.95 0.00 0 25 25 3 561.99091 1683.95816 3.18 48.19 5115 5115 MS2 26/56 Linfeng_122411_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 281 3.85 0.00 0 10 25 2 842.48285 1683.95842 3.33 48.14 5109 5109 MS2 22/28 Linfeng_122411_rIgG_2.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 222 3.67 0.00 0 66 25 2 880.91840 1760.82952 -1.38 48.11 5815 5815 MS2 21/26 Linfeng_091311_rIgG_2.raw High TAEEVAALIR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 571 3.62 0.00 0 16 25 2 536.80408 1072.60088 1.04 30.52 2870 2870 MS2 17/18 Linfeng_122411_rIgG_2.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 218 3.57 0.00 0 43 25 2 880.91833 1760.82939 -1.45 47.87 5539 5539 MS2 20/26 Linfeng_091311_rIgG_1.raw High GTYFPTWEGLFWEK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 229 3.32 0.00 0 5 25 2 880.92303 1760.83879 3.89 47.11 4978 4978 MS2 19/26 Linfeng_122411_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 287 3.19 0.00 0 38 25 2 842.47937 1683.95146 -0.80 49.37 5972 5972 MS2 20/28 Linfeng_091311_rIgG_2.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 312 3.12 0.00 0 33 25 3 561.98859 1683.95121 -0.95 49.16 5704 5704 MS2 26/56 Linfeng_091311_rIgG_1.raw High EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 281 2.95 0.00 0 65 25 2 842.47980 1683.95232 -0.29 49.12 5699 5699 MS2 19/28 Linfeng_091311_rIgG_1.raw High LTLEDLEDSWDR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 242 2.90 0.00 0 23 25 2 746.35443 1491.70159 3.58 43.05 4460 4460 MS2 19/22 Linfeng_122411_rIgG_2.raw High TDMIQALGGVEGILEHTLFK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 342 2.78 0.00 0 17 25 3 724.72070 2172.14756 4.85 55.00 5918 5918 MS2 28/76 Linfeng_122411_rIgG_2.raw High HGDEIITSTTSNYETQTFSSK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 159 2.72 0.00 0 4 25 3 782.69775 2346.07871 2.33 27.99 2536 2536 MS2 28/80 Linfeng_122411_rIgG_2.raw High LLILALER Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 49 2.61 0.00 0 15 25 2 470.81314 940.61901 -0.03 37.47 3755 3755 MS2 13/14 Linfeng_122411_rIgG_2.raw High TAEEVAALIR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 541 2.55 0.00 0 21 25 2 536.80151 1072.59575 -3.74 32.16 3448 3448 MS2 17/18 Linfeng_091311_rIgG_1.raw High VESHFDLELR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 463 2.55 0.00 0 19 25 3 415.54807 1244.62964 2.10 29.23 2701 2701 MS2 20/36 Linfeng_122411_rIgG_2.raw High EQSQLTATQTR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 398 2.50 0.00 0 20 25 2 631.81921 1262.63115 -1.91 17.71 1734 1734 MS2 12/20 Linfeng_091311_rIgG_3.raw High IDLTLLNR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 294 2.48 0.00 0 34 25 2 479.29071 957.57414 1.40 34.78 3416 3416 MS2 13/14 Linfeng_122411_rIgG_2.raw Medium EAVVNTQELLDLLVK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 304 2.47 0.00 0 34 25 3 561.98816 1683.94992 -1.71 49.42 5979 5979 MS2 24/56 Linfeng_091311_rIgG_2.raw High ISLIQIFR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 78 2.40 0.00 0 3 25 2 495.31213 989.61699 2.75 41.45 4258 4258 MS2 13/14 Linfeng_122411_rIgG_2.raw High ANPALYVLR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 495 2.35 0.00 0 17 25 2 508.79892 1016.59056 1.75 31.01 2934 2934 MS2 14/16 Linfeng_122411_rIgG_2.raw High FIcISDLR Unambiguous 1 1 IPI00007928.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 387 2.32 0.00 0 30 25 2 512.26892 1023.53057 1.31 33.55 3259 3259 MS2 13/14 Linfeng_122411_rIgG_2.raw High YYVLNALK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 303 2.06 0.00 0 14 25 2 492.28238 983.55748 1.44 31.83 3040 3040 MS2 12/14 Linfeng_122411_rIgG_2.raw High FSPIPFPPLSYK Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 382 2.05 0.00 0 25 25 2 696.88330 1392.75932 2.21 41.43 4255 4255 MS2 14/22 Linfeng_122411_rIgG_2.raw High ANPALYVLR Unambiguous 1 1 IPI00007928.4 CID 1.0000 0.0000 1 1 602 2.02 0.00 0 10 25 2 508.79517 1016.58306 -5.63 32.73 3524 3524 MS2 11/16 Linfeng_091311_rIgG_1.raw IPI00013683.2 Tubulin beta-3 chain 9.78 1 3 3 9 0.00 31.93 9.78 3 9 450 50.4 4.93 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EIVHIQAGQcGNQIGAK Unambiguous 1 1 IPI00013683.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 559 4.50 0.00 0 38 100 3 608.31372 1822.92661 2.02 25.18 1839 1839 MS2 31/64 Linfeng_20120130_CHD1_5.raw High EIVHIQAGQcGNQIGAK Unambiguous 1 1 IPI00013683.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 552 4.46 0.00 0 41 100 3 608.31403 1822.92752 2.52 25.23 1848 1848 MS2 31/64 Linfeng_20120130_CHD1_5.raw High AILVDLEPGTmDSVR Unambiguous 1 1 IPI00013683.2 M11(Oxidation) CID 1.0000 0.0000 1 1 561 3.67 0.00 0 22 100 2 816.42163 1631.83599 3.06 41.91 5552 5552 MS2 17/28 Linfeng_20120130_CHD1_5.raw High ImNTFSVVPSPK Unambiguous 1 1 IPI00013683.2 M2(Oxidation) CID 1.0000 0.0000 1 1 552 3.50 0.00 0 38 100 2 668.35236 1335.69744 -0.25 33.18 3517 3517 MS2 16/22 Linfeng_20120130_CHD1_5.raw High IMNTFSVVPSPK Unambiguous 1 1 IPI00013683.2 CID 1.0000 0.0000 1 1 524 3.48 0.00 0 27 100 2 660.35675 1319.70622 2.56 38.64 4796 4796 MS2 16/22 Linfeng_20120130_CHD1_5.raw High EIVHIQAGQcGNQIGAK Unambiguous 1 1 IPI00013683.2 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 554 3.48 0.00 0 32 100 3 608.31451 1822.92899 3.33 25.01 1813 1813 MS2 29/64 Linfeng_20120130_CHD1_5.raw High ImNTFSVVPSPK Unambiguous 1 1 IPI00013683.2 M2(Oxidation) CID 1.0000 0.0000 1 1 537 3.08 0.00 0 44 100 2 668.35284 1335.69841 0.48 33.35 3558 3558 MS2 16/22 Linfeng_20120130_CHD1_5.raw High ImNTFSVVPSPK Unambiguous 1 1 IPI00013683.2 M2(Oxidation) CID 1.0000 0.0000 1 1 568 2.98 0.00 0 39 100 2 668.35327 1335.69927 1.12 33.49 3591 3591 MS2 17/22 Linfeng_20120130_CHD1_5.raw High AILVDLEPGTmDSVR Unambiguous 1 1 IPI00013683.2 M11(Oxidation) CID 1.0000 0.0000 1 1 587 2.77 0.00 0 39 100 2 816.42169 1631.83611 3.13 41.61 5482 5482 MS2 14/28 Linfeng_20120130_CHD1_5.raw IPI00373877.3 Isoform 1 of Zinc finger protein 326 9.62 1 5 5 5 12.59 9.62 5 5 0.00 582 65.6 5.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DYGHGSYGGQR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 58 2.93 0.00 0 24 25 3 399.50662 1196.50531 -2.20 16.49 1552 1552 MS2 18/40 Linfeng_091311_rIgG_4.raw High SGYGFNEPEQSR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 62 2.76 0.00 0 42 25 2 685.80042 1370.59355 -2.65 24.78 2715 2715 MS2 15/22 Linfeng_091311_rIgG_4.raw High ESVLTATSILNNPIVK Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 251 2.74 0.00 0 33 25 3 566.99133 1698.95945 -2.50 40.65 4802 4802 MS2 26/60 Linfeng_091311_rIgG_4.raw High FGGSYGGR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 90 2.10 0.00 0 14 25 2 400.68680 800.36632 -2.86 18.87 1887 1887 MS2 12/14 Linfeng_091311_rIgG_4.raw High NSLDSFGGR Unambiguous 1 1 IPI00373877.3 CID 1.0000 0.0000 1 1 147 2.07 0.00 0 18 25 2 476.72665 952.44603 -2.41 24.96 2740 2740 MS2 14/16 Linfeng_091311_rIgG_4.raw IPI00954159.1 Isoform 1 of Protein ELYS 9.62 4 13 13 13 0.00 42.50 9.62 13 13 2266 252.3 6.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AILLPDLSEPNNEPLFSPASEVPR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 328 5.55 0.00 0 13 25 3 869.12421 2605.35807 2.73 43.95 4575 4575 MS2 40/92 Linfeng_122411_rIgG_2.raw High SSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 193 4.74 0.00 2 1 25 4 907.94202 3628.74624 3.10 31.66 3018 3018 MS2 41/198 Linfeng_122411_rIgG_2.raw High WITEEQPNSATNLR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 317 3.45 0.00 0 18 25 2 829.91174 1658.81621 1.73 27.22 2432 2432 MS2 20/26 Linfeng_122411_rIgG_2.raw High TDTPIESFPTVFAISWGQVK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 371 3.39 0.00 0 26 25 3 741.71936 2223.14353 4.60 48.59 5165 5165 MS2 31/76 Linfeng_122411_rIgG_2.raw High VAIAENLLDVIK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 154 3.37 0.00 0 13 25 2 649.39178 1297.77629 2.81 41.67 4286 4286 MS2 18/22 Linfeng_122411_rIgG_2.raw High EISEASENIYSDVR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 186 3.25 0.00 0 10 25 2 806.37982 1611.75237 1.64 27.90 2523 2523 MS2 21/26 Linfeng_122411_rIgG_2.raw High IEEPSPIVYSLPAPELPEAFFGTPISK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 223 3.14 0.00 0 5 25 3 976.85077 2928.53775 3.25 49.08 5228 5228 MS2 28/104 Linfeng_122411_rIgG_2.raw High NTEKESAWSPPPIEIR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 397 3.13 0.00 1 17 25 3 618.65247 1853.94284 1.92 31.17 2955 2955 MS2 27/60 Linfeng_122411_rIgG_2.raw High SGPSLNELIPDGYNR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 290 3.00 0.00 0 53 25 2 816.40570 1631.80412 1.03 36.70 3657 3657 MS2 16/28 Linfeng_122411_rIgG_2.raw High LPFTDTEQEcLVK Unambiguous 4 1 IPI00954159.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 288 2.87 0.00 0 4 25 2 790.38879 1579.77031 1.90 32.28 3099 3099 MS2 20/24 Linfeng_122411_rIgG_2.raw High SPLYLVSR Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 229 2.32 0.00 0 4 25 2 467.77203 934.53679 1.20 28.06 2544 2544 MS2 13/14 Linfeng_122411_rIgG_2.raw High LNIEELLK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 472 2.20 0.00 0 2 25 2 486.29324 971.57921 2.05 38.88 3933 3933 MS2 13/14 Linfeng_122411_rIgG_2.raw High LISPLASPADGVK Unambiguous 4 1 IPI00954159.1 CID 1.0000 0.0000 1 1 209 2.09 0.00 0 44 25 2 634.36804 1267.72881 2.45 29.38 2719 2719 MS2 19/24 Linfeng_122411_rIgG_2.raw IPI00002902.5 Nucleolar protein 9 9.54 1 3 3 3 10.66 9.54 3 3 702 79.3 9.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALLLLPVEQGFTFSGIcR Unambiguous 1 1 IPI00002902.5 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 311 4.18 0.00 0 16 25 3 674.36774 2021.08866 -0.14 48.75 5822 5822 MS2 30/68 Linfeng_091311_rIgG_4.raw High LAAFADALEFADEEKESPVEFTGHK Unambiguous 1 1 IPI00002902.5 CID 1.0000 0.0000 1 1 219 3.31 0.00 1 7 25 4 688.58167 2751.30483 -3.68 40.29 4756 4756 MS2 39/144 Linfeng_091311_rIgG_4.raw High ITHSDVAPTHILYAVNASWVGLcK Unambiguous 1 1 IPI00002902.5 C23(Carbamidomethyl) CID 1.0000 0.0000 1 1 285 3.17 0.00 0 17 25 4 663.84418 2652.35488 -2.07 39.73 4685 4685 MS2 39/138 Linfeng_091311_rIgG_4.raw IPI00004273.6 Isoform 1 of RNA-binding protein 25 9.49 2 7 7 7 19.40 9.49 7 7 843 100.1 6.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IIEYIGEEEATLVDFVcSK Unambiguous 2 1 IPI00004273.6 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 3.81 0.00 0 25 25 3 739.03229 2215.08231 -0.75 48.37 5848 5848 MS2 27/72 Linfeng_091311_rIgG_2.raw High DREEDEEDAYER Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 10 2.99 0.00 1 45 25 3 519.20807 1555.60965 -3.03 19.58 2025 2025 MS2 19/44 Linfeng_091311_rIgG_2.raw High LLHDLQIGEK Unambiguous 1 1 IPI00004273.6 CID 1.0000 0.0000 1 1 298 2.91 0.00 0 26 25 3 389.22256 1165.65314 -3.83 27.09 3076 3076 MS2 22/36 Linfeng_091311_rIgG_2.raw High DREEDEEDAYERR Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 51 2.78 0.00 2 23 25 3 571.24158 1711.71018 -3.10 19.08 1955 1955 MS2 18/48 Linfeng_091311_rIgG_2.raw High LLAEGHPDPDAELQR Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 356 2.52 0.00 0 25 25 3 554.27795 1660.81931 -5.84 25.86 2906 2906 MS2 22/56 Linfeng_091311_rIgG_2.raw High LGASNSPGQPNSVK Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 326 2.21 0.00 0 11 25 2 678.34753 1355.68779 -2.68 18.19 1829 1829 MS2 15/26 Linfeng_091311_rIgG_2.raw High LLIYETEAK Unambiguous 2 1 IPI00004273.6 CID 1.0000 0.0000 1 1 196 2.18 0.00 0 53 25 2 540.30127 1079.59526 -2.85 29.35 3384 3384 MS2 12/16 Linfeng_091311_rIgG_2.raw IPI00893580.1 HLA-B associated transcript 1 9.45 6 3 3 5 11.61 9.45 3 5 328 38.2 7.20 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLAITFVSDENDAK Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 349 2.79 0.00 0 43 25 2 740.36957 1479.73186 -0.53 33.46 3506 3506 MS2 21/26 Linfeng_122411_rIgG_5.raw High ILVATNLFGR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 177 2.25 0.00 0 24 15 2 552.33197 1103.65666 -0.50 36.47 3922 3922 MS2 16/18 Linfeng_122411_rIgG_5.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 378 2.22 0.00 0 6 25 2 453.73749 906.46770 -0.33 29.55 2971 2971 MS2 10/12 Linfeng_122411_rIgG_5.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 360 2.22 0.00 0 21 25 2 453.73868 906.47008 2.29 28.86 2404 2404 MS2 11/12 Linfeng_122411_rIgG_9.raw High DVQEIFR Unambiguous 6 1 IPI00893580.1 CID 1.0000 0.0000 1 1 340 2.12 0.00 0 12 25 2 453.73837 906.46947 1.62 30.32 3015 3015 MS2 11/12 Linfeng_122411_rIgG_6.raw IPI00006900.1 Something about silencing protein 10 9.39 1 4 4 4 12.87 9.39 4 4 479 54.5 5.62 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High QSQQEAEEEEREEEEEAQIIQR Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 76 4.61 0.00 1 19 25 3 906.40869 2717.21152 -0.69 29.41 3347 3347 MS2 31/84 Linfeng_091311_rIgG_4.raw High ESPELLELIEDLK Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 371 3.07 0.00 0 21 25 2 764.41113 1527.81499 -0.21 49.97 5976 5976 MS2 18/24 Linfeng_091311_rIgG_4.raw High KESPELLELIEDLK Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 353 2.92 0.00 1 17 25 3 552.64081 1655.90787 -1.46 44.72 5312 5312 MS2 22/52 Linfeng_091311_rIgG_4.raw High YSGELSGIR Unambiguous 1 1 IPI00006900.1 CID 1.0000 0.0000 1 1 341 2.27 0.00 0 27 25 2 491.25244 981.49761 -2.46 24.96 2739 2739 MS2 13/16 Linfeng_091311_rIgG_4.raw IPI00911038.2 apoptotic chromatin condensation inducer in the nucleus isoform 3 8.99 5 7 7 12 0.00 44.41 8.99 7 12 1301 147.3 6.73 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLKTEEEEEEEEEEEEDDEEEEGDDEGQK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 1 6.54 0.00 1 4 25 4 875.58752 3499.32827 3.51 24.06 2014 2014 MS2 46/168 Linfeng_122411_rIgG_2.raw High NLKTEEEEEEEEEEEEDDEEEEGDDEGQKSR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 6 6.50 0.00 2 0 25 4 936.37146 3742.46401 3.98 23.04 1896 1896 MS2 51/180 Linfeng_122411_rIgG_2.raw High NLKTEEEEEEEEEEEEDDEEEEGDDEGQKSR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 6 5.26 0.00 2 1 25 5 749.29858 3742.46381 3.92 23.06 1899 1899 MS2 53/240 Linfeng_122411_rIgG_2.raw High AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 395 4.40 0.00 0 7 25 3 701.70508 2103.10068 2.98 43.30 4493 4493 MS2 35/68 Linfeng_122411_rIgG_2.raw High ASLVALPEQTASEEETPPPLLTK Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 351 3.88 0.00 0 5 25 3 807.76495 2421.28031 1.77 37.14 3713 3713 MS2 29/88 Linfeng_122411_rIgG_2.raw High TGTLVEEAFWIDKIK Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 365 2.69 0.00 1 18 25 3 583.98615 1749.94388 0.93 40.25 4088 4088 MS2 21/56 Linfeng_122411_rIgG_3.raw High AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 396 2.68 0.00 0 12 25 3 701.70557 2103.10215 3.68 43.18 4587 4587 MS2 23/68 Linfeng_122411_rIgG_4.raw High STLADYSAQKDLEPESDR Unambiguous 3 1 IPI00911038.2 CID 1.0000 0.0000 1 1 201 2.68 0.00 1 13 25 3 675.65265 2024.94339 1.28 4.52 506 506 MS2 22/68 Linfeng_122411_rIgG_2.raw Medium AAPcIYWLPLTDSQIVQK Unambiguous 5 1 IPI00911038.2 C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 407 2.47 0.00 0 24 25 3 701.70465 2103.09940 2.37 43.36 4492 4492 MS2 24/68 Linfeng_122411_rIgG_3.raw High SGVSITIDDPVR Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 528 2.47 0.00 0 10 25 2 629.83612 1258.66496 0.91 30.50 2867 2867 MS2 17/22 Linfeng_122411_rIgG_2.raw Medium TGTLVEEAFWIDKIK Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 329 2.46 0.00 1 19 25 3 583.98694 1749.94626 2.29 40.13 4091 4091 MS2 27/56 Linfeng_122411_rIgG_2.raw High SGVSITIDDPVR Unambiguous 5 1 IPI00911038.2 CID 1.0000 0.0000 1 1 517 2.38 0.00 0 18 25 2 629.83649 1258.66570 1.49 30.63 2853 2853 MS2 16/22 Linfeng_122411_rIgG_3.raw IPI00293464.5 DNA damage-binding protein 1 8.95 2 7 7 8 15.76 7.11 5 5 10.21 4.47 3 3 1140 126.9 5.26 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High IEVQDTSGGTTALRPSASTQALSSSVSSSK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 483 5.62 0.00 1 6 100 3 984.83325 2952.48520 3.20 31.69 2395 2395 MS2 36/116 Linfeng_20120130_CHD1_3.raw High IEVQDTSGGTTALRPSASTQALSSSVSSSK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 279 5.44 0.00 0 0 25 3 984.83411 2952.48777 4.07 27.38 2427 2427 MS2 41/116 Linfeng_122411_rIgG_3.raw High IGRPSETGIIGIIDPEcR Unambiguous 1 1 IPI00293464.5 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 370 3.10 0.00 0 24 25 3 661.68390 1983.03714 2.14 36.61 3620 3620 MS2 33/68 Linfeng_122411_rIgG_3.raw High EATADDLIKVVEELTR Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 401 2.81 0.00 1 11 25 3 601.32495 1801.96030 3.34 50.13 5360 5360 MS2 24/60 Linfeng_122411_rIgG_3.raw High VTLGTQPTVLR Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 329 2.50 0.00 0 48 100 2 592.85547 1184.70366 3.26 30.21 2177 2177 MS2 13/20 Linfeng_20120130_CHD1_3.raw High DLLFILTAK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 125 2.26 0.00 0 36 25 2 517.31982 1033.63237 3.01 45.49 4768 4768 MS2 13/16 Linfeng_122411_rIgG_3.raw High LYEWTTEK Unambiguous 2 1 IPI00293464.5 CID 1.0000 0.0000 1 1 221 2.15 0.00 0 45 25 2 535.26477 1069.52226 2.04 26.09 2253 2253 MS2 12/14 Linfeng_122411_rIgG_3.raw High EmLGGEIIPR Unambiguous 2 1 IPI00293464.5 M2(Oxidation) CID 1.0000 0.0000 1 1 588 2.09 0.00 0 50 100 2 565.79901 1130.59075 2.87 32.34 2506 2506 MS2 13/18 Linfeng_20120130_CHD1_3.raw IPI00217240.1 WD repeat-containing protein 75 8.67 1 5 5 8 8.14 4.94 3 3 14.97 6.99 4 5 830 94.4 5.96 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DVPESFTSEAYQWLNR Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 197 3.54 0.00 0 22 25 3 647.97290 1941.90415 3.27 44.65 4774 4774 MS2 29/60 Linfeng_122411_rIgG_4.raw High QLLAEESLPTTPFYFILGK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 172 3.41 0.00 0 8 25 2 1084.09167 2167.17607 3.44 49.98 5341 5341 MS2 19/36 Linfeng_122411_rIgG_3.raw High ELSFVLDYINQSPK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 391 3.32 0.00 0 19 25 2 826.92920 1652.85112 -1.18 43.41 5153 5153 MS2 22/26 Linfeng_091311_rIgG_3.raw High LWDYIDGILIK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 290 2.80 0.00 0 34 25 2 674.88080 1348.75432 2.33 43.83 4670 4670 MS2 17/20 Linfeng_122411_rIgG_4.raw High QLLAEESLPTTPFYFILGK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 251 2.64 0.00 0 33 25 3 723.06348 2167.17588 3.35 49.88 5328 5328 MS2 19/72 Linfeng_122411_rIgG_3.raw High DVPESFTSEAYQWLNR Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 171 2.64 0.00 0 41 25 3 647.97040 1941.89664 -0.60 45.79 5448 5448 MS2 21/60 Linfeng_091311_rIgG_4.raw High EKPDIFQLVSVK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 291 2.58 0.00 0 17 25 3 468.27094 1402.79825 2.95 36.18 3708 3708 MS2 21/44 Linfeng_122411_rIgG_4.raw High LWDYIDGILIK Unambiguous 1 1 IPI00217240.1 CID 1.0000 0.0000 1 1 315 2.18 0.00 0 37 25 2 674.87854 1348.74980 -1.01 44.98 5349 5349 MS2 18/20 Linfeng_091311_rIgG_3.raw IPI00908873.1 Isoform 3 of Nucleolar and coiled-body phosphoprotein 1 8.57 1 1 4 5 15.49 8.57 4 5 0.00 700 73.7 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATGATQQDANASSLLDIYSFWLNR Unambiguous 1 1 IPI00908873.1 CID 1.0000 0.0000 1 1 281 5.27 0.00 0 23 25 3 881.43353 2642.28604 0.54 51.84 6191 6191 MS2 35/92 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 124 2.87 0.00 0 5 25 3 563.33221 1687.98209 2.29 54.30 6422 6422 MS2 27/56 Linfeng_091311_rIgG_3.raw High VREEEIEVDSR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 312 2.86 0.00 1 8 25 3 454.22696 1360.66632 -2.97 20.98 2193 2193 MS2 22/40 Linfeng_091311_rIgG_3.raw High DNQLSEVANK Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 286 2.37 0.00 0 18 25 2 559.27484 1117.54241 -5.40 22.13 2351 2351 MS2 13/18 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 96 2.12 0.00 0 66 25 2 844.49548 1687.98369 3.23 54.35 6428 6428 MS2 19/28 Linfeng_091311_rIgG_3.raw IPI00004968.1 Pre-mRNA-processing factor 19 8.53 1 3 3 3 7.51 8.53 3 3 0.00 504 55.1 6.61 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ALQDEWDAVMLHSFTLR Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 344 2.63 0.00 0 31 25 3 678.00330 2031.99533 -0.21 45.57 5152 5152 MS2 28/64 Linfeng_122411_rIgG_5.raw Medium ILTGGADKNVVVFDK Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 331 2.48 0.00 1 41 25 3 525.96307 1575.87467 0.32 26.33 2529 2529 MS2 23/56 Linfeng_122411_rIgG_5.raw High TLQLDNNFEVK Unambiguous 1 1 IPI00004968.1 CID 1.0000 0.0000 1 1 386 2.40 0.00 0 50 25 2 660.84210 1320.67693 -1.92 31.13 3191 3191 MS2 15/20 Linfeng_122411_rIgG_5.raw IPI00328103.4 "Keratin, type I cytoskeletal 27" 8.50 1 2 4 56 29.28 8.50 4 13 0.00 109.73 5.88 3 43 459 49.8 5.05 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 196 3.32 0.00 0 3 20 2 555.25049 1109.49370 3.45 34.01 3488 3488 MS2 13/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 193 3.07 0.00 0 7 67 2 555.25031 1109.49333 3.12 34.27 3722 3722 MS2 13/16 Linfeng_20120130_CHD1_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 165 3.03 0.00 0 3 55 2 555.24945 1109.49162 1.58 35.00 3959 3959 MS2 13/16 Linfeng_20120130_CHD1_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 193 2.97 0.00 0 4 93 2 555.25055 1109.49382 3.56 35.09 3146 3146 MS2 13/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 197 2.96 0.00 0 2 51 2 555.25079 1109.49431 4.00 34.81 2972 2972 MS2 13/16 Linfeng_20120130_CHD1_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 205 2.90 0.00 0 3 15 2 555.25043 1109.49358 3.34 35.04 3716 3716 MS2 13/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 210 2.90 0.00 0 1 77 2 555.25043 1109.49358 3.34 34.44 2944 2944 MS2 13/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 197 2.86 0.00 0 2 30 2 555.25067 1109.49407 3.78 34.33 3372 3372 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 171 2.76 0.00 0 3 100 2 555.25024 1109.49321 3.01 34.42 3662 3662 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 166 2.75 0.00 0 3 100 2 555.25024 1109.49321 3.01 34.05 2584 2584 MS2 13/16 Linfeng_20120130_CHD1_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 209 2.73 0.00 0 45 100 2 555.25031 1109.49333 3.12 36.71 3351 3351 MS2 12/16 Linfeng_20120130_CHD1_3.raw High LASYLENVR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 507 2.72 0.00 0 22 100 2 532.79205 1064.57683 3.11 29.57 2188 2188 MS2 13/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 212 2.70 0.00 0 18 100 2 555.25116 1109.49504 4.66 33.80 2782 2782 MS2 14/16 Linfeng_20120130_CHD1_3.raw High LASYLENVR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 510 2.65 0.00 0 44 100 2 532.79230 1064.57732 3.57 29.81 2223 2223 MS2 15/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 179 2.64 0.00 0 10 20 2 555.24902 1109.49077 0.81 33.96 3706 3706 MS2 13/16 Linfeng_20120130_CHD1_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 202 2.60 0.00 0 26 100 2 555.25055 1109.49382 3.56 36.48 3848 3848 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 219 2.59 0.00 0 14 100 2 555.25037 1109.49346 3.23 34.98 2746 2746 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.59 0.00 0 20 100 2 555.25104 1109.49480 4.44 33.32 3163 3163 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.58 0.00 0 24 100 2 555.25079 1109.49431 4.00 35.65 3144 3144 MS2 13/16 Linfeng_20120130_CHD1_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.57 0.00 0 23 100 2 555.24982 1109.49236 2.24 35.33 3968 3968 MS2 13/16 Linfeng_20120130_CHD1_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 212 2.56 0.00 0 32 100 2 555.25049 1109.49370 3.45 38.24 4334 4334 MS2 12/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 215 2.55 0.00 0 49 100 2 555.25073 1109.49419 3.89 36.56 4017 4017 MS2 13/16 Linfeng_20120130_CHD1_4.raw High ALEEANADLEQK Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 266 2.52 0.00 0 11 25 2 665.82623 1330.64519 -2.54 23.53 2514 2514 MS2 17/22 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 90 2.51 0.00 0 12 25 2 555.24683 1109.48638 -3.15 33.12 3823 3823 MS2 13/16 Linfeng_091311_rIgG_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 204 2.51 0.00 0 33 100 2 555.25085 1109.49443 4.11 36.72 3498 3498 MS2 12/16 Linfeng_20120130_CHD1_2.raw High LASYLENVR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 508 2.47 0.00 0 29 100 2 532.79218 1064.57707 3.34 29.48 2176 2176 MS2 14/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 208 2.45 0.00 0 16 100 2 555.25037 1109.49346 3.23 33.96 2597 2597 MS2 13/16 Linfeng_20120130_CHD1_6.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 211 2.45 0.00 0 46 100 2 555.25049 1109.49370 3.45 32.99 3256 3256 MS2 12/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.43 0.00 0 16 100 2 555.24994 1109.49260 2.46 33.44 2781 2781 MS2 12/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 85 2.43 0.00 0 13 5 2 555.24652 1109.48577 -3.70 32.96 3554 3554 MS2 13/16 Linfeng_091311_rIgG_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 84 2.42 0.00 0 10 5 2 555.24640 1109.48552 -3.92 32.90 3858 3858 MS2 13/16 Linfeng_091311_rIgG_2.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 502 2.42 0.00 0 12 100 2 545.77045 1090.53362 2.38 20.76 1347 1347 MS2 14/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 211 2.42 0.00 0 1 100 2 555.25098 1109.49468 4.33 34.08 2959 2959 MS2 13/16 Linfeng_20120130_CHD1_2.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.40 0.00 0 4 100 2 555.24994 1109.49260 2.46 35.07 2713 2713 MS2 14/16 Linfeng_20120130_CHD1_7.raw High LASYLENVR Unambiguous 1 1 IPI00328103.4 CID 1.0000 0.0000 1 1 381 2.38 0.00 0 21 25 2 532.78894 1064.57060 -2.74 28.91 3250 3250 MS2 15/16 Linfeng_091311_rIgG_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.36 0.00 0 16 21 2 555.24707 1109.48686 -2.71 32.81 3807 3807 MS2 13/16 Linfeng_091311_rIgG_3.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 225 2.36 0.00 0 29 100 2 555.25037 1109.49346 3.23 35.16 3828 3828 MS2 13/16 Linfeng_20120130_CHD1_8.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 407 2.33 0.00 0 31 100 2 553.76770 1106.52812 1.98 13.15 884 884 MS2 14/16 Linfeng_20120130_CHD1_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.32 0.00 0 39 100 2 555.25116 1109.49504 4.66 33.11 3121 3121 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VTmQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 M3(Oxidation) CID 1.0000 0.0000 1 1 445 2.31 0.00 0 13 100 2 553.76831 1106.52934 3.08 13.00 858 858 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 224 2.30 0.00 0 45 100 2 555.25043 1109.49358 3.34 33.28 3508 3508 MS2 13/16 Linfeng_20120130_CHD1_10.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 223 2.27 0.00 0 23 100 2 555.25037 1109.49346 3.23 35.39 3602 3602 MS2 13/16 Linfeng_20120130_CHD1_1.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 506 2.25 0.00 0 11 100 2 545.77045 1090.53362 2.38 18.30 1178 1178 MS2 15/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 206 2.21 0.00 0 46 100 2 555.25085 1109.49443 4.11 36.78 3916 3916 MS2 11/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 181 2.21 0.00 0 55 100 2 555.24982 1109.49236 2.24 38.84 4445 4445 MS2 12/16 Linfeng_20120130_CHD1_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 213 2.20 0.00 0 27 100 2 555.25098 1109.49468 4.33 33.25 3149 3149 MS2 13/16 Linfeng_20120130_CHD1_1.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 180 2.16 0.00 0 29 100 2 555.24963 1109.49199 1.91 35.42 3113 3113 MS2 13/16 Linfeng_20120130_CHD1_9.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 87 2.16 0.00 0 6 19 2 555.24683 1109.48638 -3.15 33.03 3764 3764 MS2 13/16 Linfeng_091311_rIgG_5.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 173 2.15 0.00 0 27 100 2 555.24976 1109.49224 2.13 33.42 3433 3433 MS2 13/16 Linfeng_20120130_CHD1_8.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 90 2.14 0.00 0 24 25 2 555.24707 1109.48686 -2.71 33.08 3807 3807 MS2 13/16 Linfeng_091311_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 83 2.13 0.00 0 40 25 2 555.24725 1109.48723 -2.38 32.91 3811 3811 MS2 14/16 Linfeng_091311_rIgG_4.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 181 2.11 0.00 0 34 100 2 555.25024 1109.49321 3.01 35.69 3276 3276 MS2 13/16 Linfeng_20120130_CHD1_2.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 334 2.09 0.00 0 13 25 2 545.76752 1090.52776 -2.99 22.53 2372 2372 MS2 15/16 Linfeng_091311_rIgG_9.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 356 2.08 0.00 0 10 13 2 545.76782 1090.52837 -2.43 22.66 2395 2395 MS2 15/16 Linfeng_091311_rIgG_7.raw High DAEAWFNEK Unambiguous 3 2 IPI00009865.4;IPI00328103.4 CID 1.0000 0.0000 1 1 88 2.04 0.00 0 14 25 2 555.24677 1109.48625 -3.26 33.14 3878 3878 MS2 13/16 Linfeng_091311_rIgG_8.raw High VTMQNLNDR Unambiguous 6 4 IPI00009865.4;IPI00384444.6;IPI00217963.3;IPI00328103.4 CID 1.0000 0.0000 1 1 352 2.01 0.00 0 23 14 2 545.76825 1090.52922 -1.65 22.42 2385 2385 MS2 15/16 Linfeng_091311_rIgG_4.raw IPI00915274.1 h/ACA ribonucleoprotein complex subunit 4 isoform 2 8.45 4 3 3 4 10.39 8.45 3 4 509 57.0 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LDTSQWPLLLK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 284 2.87 0.00 0 53 25 2 657.37817 1313.74907 2.02 41.99 4681 4681 MS2 15/20 Linfeng_122411_rIgG_5.raw High ALETLTGALFQRPPLIAAVK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 39 2.61 0.00 0 12 25 3 703.75476 2109.24973 3.12 41.84 4419 4419 MS2 24/76 Linfeng_122411_rIgG_4.raw High DSAVNAIcYGAK Unambiguous 4 1 IPI00915274.1 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 174 2.61 0.00 0 53 25 2 634.80182 1268.59636 1.85 22.24 1894 1894 MS2 18/22 Linfeng_122411_rIgG_4.raw High LDTSQWPLLLK Unambiguous 4 1 IPI00915274.1 CID 1.0000 0.0000 1 1 285 2.30 0.00 0 37 25 2 657.37878 1313.75029 2.95 41.98 4436 4436 MS2 13/20 Linfeng_122411_rIgG_4.raw IPI00292387.6 Isoform Alpha of Nucleolar and coiled-body phosphoprotein 1 8.44 2 1 4 5 15.10 8.44 4 5 0.00 699 73.6 9.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ATGATQQDANASSLLDIYSFWLK Unambiguous 2 1 IPI00292387.6 CID 1.0000 0.0000 1 1 300 4.88 0.00 0 47 25 3 834.08435 2500.23850 1.18 51.93 6202 6202 MS2 39/88 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 124 2.87 0.00 0 5 25 3 563.33221 1687.98209 2.29 54.30 6422 6422 MS2 27/56 Linfeng_091311_rIgG_3.raw High VREEEIEVDSR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 312 2.86 0.00 1 8 25 3 454.22696 1360.66632 -2.97 20.98 2193 2193 MS2 22/40 Linfeng_091311_rIgG_3.raw High DNQLSEVANK Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 286 2.37 0.00 0 18 25 2 559.27484 1117.54241 -5.40 22.13 2351 2351 MS2 13/18 Linfeng_091311_rIgG_3.raw High VVPSDLYPLVLGFLR Unambiguous 3 2 IPI00292387.6;IPI00908873.1 CID 1.0000 0.0000 1 1 96 2.12 0.00 0 66 25 2 844.49548 1687.98369 3.23 54.35 6428 6428 MS2 19/28 Linfeng_091311_rIgG_3.raw IPI00910597.1 "cDNA FLJ56823, highly similar to Protein-glutamine gamma-glutamyltransferase E" 8.26 2 3 3 3 9.71 8.26 3 3 533 58.8 7.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLSVDVYYDPmGNPLDK Unambiguous 2 1 IPI00910597.1 M11(Oxidation) CID 1.0000 0.0000 1 1 347 4.37 0.00 0 0 100 2 978.46130 1955.91533 4.98 42.88 5245 5245 MS2 20/32 Linfeng_20120130_CHD1_4.raw High LEFIVSTGPYPSESAmTK Unambiguous 2 1 IPI00910597.1 M16(Oxidation) CID 1.0000 0.0000 1 1 510 3.34 0.00 0 19 100 2 986.98694 1972.96660 4.71 43.04 5282 5282 MS2 16/34 Linfeng_20120130_CHD1_4.raw High FSSQELILR Unambiguous 2 1 IPI00910597.1 CID 1.0000 0.0000 1 1 508 2.01 0.00 0 55 100 2 546.80798 1092.60869 3.53 38.44 4368 4368 MS2 13/16 Linfeng_20120130_CHD1_4.raw IPI00033583.3 Serpin B12 8.15 2 3 3 3 6.55 8.15 3 3 405 46.2 5.53 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TQTILFYGR Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 256 2.40 0.00 0 29 25 2 549.80200 1098.59673 2.25 31.56 3006 3006 MS2 13/16 Linfeng_122411_rIgG_2.raw High IGFIEEVK Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 264 2.11 0.00 0 13 25 2 467.76669 934.52611 1.76 30.34 2846 2846 MS2 13/14 Linfeng_122411_rIgG_2.raw High ADLTGISPSPNLYLSK Unambiguous 2 1 IPI00033583.3 CID 1.0000 0.0000 1 1 353 2.03 0.00 0 31 25 2 838.45245 1675.89763 4.44 31.61 2616 2616 MS2 12/30 Linfeng_122411_rIgG_7.raw IPI00013933.2 Isoform DPI of Desmoplakin 8.12 3 17 17 30 0.00 35.69 5.09 10 12 48.75 4.98 11 18 2871 331.6 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ITNLTQQLEQASIVK Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 315 4.60 0.00 0 3 100 2 843.47833 1685.94939 3.62 45.06 5743 5743 MS2 21/28 Linfeng_20120130_CHD1_4.raw High TLELQGLINDLQR Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 321 4.13 0.00 0 30 25 3 504.95221 1512.84208 2.63 42.80 4429 4429 MS2 26/48 Linfeng_122411_rIgG_2.raw High AQQIHSQTSQQYPLYDLDLGK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 348 3.81 0.00 0 13 25 3 811.74170 2433.21054 2.47 33.09 3201 3201 MS2 30/80 Linfeng_122411_rIgG_2.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 178 3.79 0.00 0 28 100 2 769.94592 1538.88457 3.67 42.91 5251 5251 MS2 22/28 Linfeng_20120130_CHD1_4.raw High SAIYQLEEEYENLLK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 369 3.71 0.00 0 23 25 3 614.64557 1841.92215 2.91 45.98 4835 4835 MS2 27/56 Linfeng_122411_rIgG_2.raw High GFFDPNTEENLTYLQLK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 315 3.52 0.00 0 21 25 3 677.00403 2028.99753 3.04 42.34 4371 4371 MS2 23/64 Linfeng_122411_rIgG_2.raw High TmIQSPSGVILQEAADVHAR Unambiguous 3 1 IPI00013933.2 M2(Oxidation) CID 1.0000 0.0000 1 1 587 3.39 0.00 0 20 100 3 713.70343 2139.09574 4.37 44.39 5595 5595 MS2 26/76 Linfeng_20120130_CHD1_4.raw High LNDSILQATEQR Unambiguous 2 1 IPI00013933.2 CID 1.0000 0.0000 1 1 572 3.23 0.00 0 18 100 2 694.36475 1387.72222 3.30 33.54 3565 3565 MS2 18/22 Linfeng_20120130_CHD1_10.raw High TmIQSPSGVILQEAADVHAR Unambiguous 3 1 IPI00013933.2 M2(Oxidation) CID 1.0000 0.0000 1 1 582 3.23 0.00 0 18 100 3 713.70361 2139.09629 4.63 44.64 5651 5651 MS2 26/76 Linfeng_20120130_CHD1_4.raw High LLEAQIASGGVVDPVNSVFLPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 166 3.21 0.00 0 18 25 3 751.75684 2253.25595 3.07 42.56 4148 4148 MS2 33/84 Linfeng_122411_rIgG_9.raw High AQQIHSQTSQQYPLYDLDLGK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 604 2.85 0.00 0 28 100 3 811.74310 2433.21476 4.20 42.79 5225 5225 MS2 24/80 Linfeng_20120130_CHD1_4.raw High LLEAQIATGGIIDPK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 175 2.72 0.00 0 16 25 2 769.94409 1538.88091 1.29 34.73 3409 3409 MS2 20/28 Linfeng_122411_rIgG_2.raw High SVEEVASEIQPFLR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 409 2.67 0.00 0 42 25 2 802.42450 1603.84172 5.63 41.17 3972 3972 MS2 17/26 Linfeng_122411_rIgG_9.raw High QLQNIIQATSR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 463 2.64 0.00 0 10 25 2 636.35828 1271.70928 2.05 27.19 2428 2428 MS2 17/20 Linfeng_122411_rIgG_2.raw High TLELQGLINDLQR Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 309 2.62 0.00 0 38 25 2 756.92419 1512.84111 1.99 42.77 4018 4018 MS2 17/24 Linfeng_122411_rIgG_7.raw High LLQLQEQMR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 570 2.57 0.00 0 7 100 2 579.82104 1158.63481 4.14 32.16 3071 3071 MS2 13/16 Linfeng_20120130_CHD1_4.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 707 2.48 0.00 0 27 100 2 565.31085 1129.61443 3.93 38.22 4236 4236 MS2 14/16 Linfeng_20120130_CHD1_1.raw High ALLQAILQTEDMLK Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 462 2.46 0.00 0 24 100 2 793.94342 1586.87956 -1.72 55.18 7348 7348 MS2 20/26 Linfeng_20120130_CHD1_4.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 674 2.45 0.00 0 43 100 2 565.31049 1129.61370 3.28 38.22 4329 4329 MS2 13/16 Linfeng_20120130_CHD1_4.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 684 2.39 0.00 0 42 100 2 565.31110 1129.61492 4.36 38.16 4222 4222 MS2 14/16 Linfeng_20120130_CHD1_1.raw High YIELLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 401 2.36 0.00 0 29 100 2 454.26770 907.52812 3.69 36.32 3969 3969 MS2 11/12 Linfeng_20120130_CHD1_4.raw High LQSLTENLTK Unambiguous 1 1 IPI00013933.2 CID 1.0000 0.0000 1 1 534 2.30 0.00 0 10 100 2 573.82324 1146.63921 2.34 25.95 1869 1869 MS2 11/18 Linfeng_20120130_CHD1_4.raw High QLQNIIQATSR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 469 2.28 0.00 0 17 25 2 636.35785 1271.70842 1.38 28.13 2726 2726 MS2 15/20 Linfeng_122411_rIgG_6.raw High YIELLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 412 2.24 0.00 0 23 100 2 454.26730 907.52733 2.82 36.40 3985 3985 MS2 10/12 Linfeng_20120130_CHD1_4.raw High YGDGIQLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 286 2.21 0.00 0 26 25 2 511.76721 1022.52715 0.56 25.10 2321 2321 MS2 15/16 Linfeng_122411_rIgG_6.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 527 2.17 0.00 0 64 100 2 565.30847 1129.60967 -0.29 38.53 4599 4599 MS2 13/16 Linfeng_20120130_CHD1_10.raw High IEVLEEELR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 519 2.15 0.00 0 19 25 2 565.31006 1129.61284 2.52 31.36 2730 2730 MS2 15/16 Linfeng_122411_rIgG_9.raw High QLQNIIQATSR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 547 2.12 0.00 0 56 100 2 636.35980 1271.71233 4.45 31.21 2734 2734 MS2 13/20 Linfeng_20120130_CHD1_1.raw High YIELLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 413 2.09 0.00 0 49 100 2 454.26770 907.52812 3.69 35.99 3905 3905 MS2 10/12 Linfeng_20120130_CHD1_4.raw High YIELLTR Unambiguous 3 1 IPI00013933.2 CID 1.0000 0.0000 1 1 419 2.03 0.00 0 33 100 2 454.26746 907.52764 3.16 36.13 3931 3931 MS2 10/12 Linfeng_20120130_CHD1_4.raw IPI00922068.1 Isoform 5 of Insulin-like growth factor 2 mRNA-binding protein 2 8.11 6 1 3 3 8.56 8.11 3 3 493 54.7 7.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ILVPTQFVGAIIGK Unambiguous 8 2 IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 2 48 3.54 0.00 0 9 25 3 485.97083 1455.89792 3.08 45.22 4845 4845 MS2 29/52 Linfeng_122411_rIgG_4.raw High IIGHFFASQTAQR Unambiguous 6 1 IPI00922068.1 CID 1.0000 0.0000 1 1 470 2.86 0.00 0 66 25 3 492.59729 1475.77732 1.28 26.30 2426 2426 MS2 22/48 Linfeng_122411_rIgG_4.raw High MVIITGPPEAQFK Unambiguous 10 3 IPI00008557.6;IPI00922068.1;IPI00658000.3 CID 1.0000 0.0000 1 1 506 2.17 0.00 0 17 25 2 715.88971 1430.77214 0.60 33.81 3409 3409 MS2 14/24 Linfeng_122411_rIgG_4.raw IPI00789041.2 Isoform 1 of Pinin 7.81 2 5 5 5 12.05 7.81 5 5 717 81.6 7.14 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VESVEPSENEASK Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 162 2.57 0.00 0 24 25 2 702.82684 1404.64641 -1.82 18.33 1822 1822 MS2 14/24 Linfeng_091311_rIgG_3.raw Medium TKPHLFYIPGR Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 434 2.48 0.00 0 16 25 3 443.58621 1328.74408 -2.50 28.16 3185 3185 MS2 25/40 Linfeng_091311_rIgG_3.raw High GFSDSGGGPPAK Unambiguous 1 1 IPI00789041.2 CID 1.0000 0.0000 1 1 166 2.46 0.00 0 23 25 2 538.75269 1076.49809 -2.50 18.31 1820 1820 MS2 16/22 Linfeng_091311_rIgG_3.raw High LEVQAEEER Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 235 2.30 0.00 0 17 25 2 551.77106 1102.53484 -2.46 20.74 2162 2162 MS2 15/16 Linfeng_091311_rIgG_3.raw High FKQESTVATER Unambiguous 2 1 IPI00789041.2 CID 1.0000 0.0000 1 1 288 2.25 0.00 1 18 25 2 648.33215 1295.65703 -1.57 16.66 1587 1587 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00291755.6 Isoform 1 of Nuclear pore membrane glycoprotein 210 7.63 2 11 11 13 42.19 7.63 11 13 1887 205.0 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFGAPEVLENLEVK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 458 4.77 0.00 0 6 25 3 515.28516 1543.84092 2.72 40.65 4158 4158 MS2 37/52 Linfeng_122411_rIgG_2.raw High LQLLNPEIEAEQILMSPNSYIK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 287 4.74 0.00 0 7 25 3 848.45630 2543.35434 4.59 48.99 5217 5217 MS2 35/84 Linfeng_122411_rIgG_2.raw High LTSIIFAEDITTGQVLR Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 212 4.04 0.00 0 14 25 2 939.02533 1877.04338 2.90 42.72 4419 4419 MS2 22/32 Linfeng_122411_rIgG_2.raw High AVDPTSGQLYGLAR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 467 3.68 0.00 0 27 25 3 483.25677 1447.75577 1.20 30.67 2890 2890 MS2 29/52 Linfeng_122411_rIgG_2.raw High GVAIGQTSLTASVTNK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 326 3.42 0.00 0 6 25 2 773.92651 1546.84575 1.40 27.89 2522 2522 MS2 24/30 Linfeng_122411_rIgG_2.raw High AVDPTSGQLYGLAR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 412 3.31 0.00 0 8 25 2 724.38165 1447.75603 1.38 30.61 2882 2882 MS2 22/26 Linfeng_122411_rIgG_2.raw High ELYLEDSPLELK Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 395 3.25 0.00 0 10 25 2 724.88135 1448.75542 2.39 37.85 3804 3804 MS2 19/22 Linfeng_122411_rIgG_2.raw High VFGAPEVLENLEVK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 443 3.19 0.00 0 12 25 2 772.42407 1543.84087 2.69 40.63 4155 4155 MS2 23/26 Linfeng_122411_rIgG_2.raw High VGQALELPLR Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 157 2.94 0.00 0 14 25 2 548.33130 1095.65532 2.91 32.40 3114 3114 MS2 17/18 Linfeng_122411_rIgG_2.raw High DDFVQIGK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 300 2.61 0.00 0 43 25 2 461.23816 921.46904 1.49 26.23 2299 2299 MS2 13/14 Linfeng_122411_rIgG_2.raw High ITIAAYLPLK Unambiguous 2 1 IPI00291755.6 CID 1.0000 0.0000 1 1 55 2.15 0.00 0 4 25 2 551.84814 1102.68901 1.73 39.00 3949 3949 MS2 16/18 Linfeng_122411_rIgG_2.raw High TVSVGLTLLR Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 124 2.06 0.00 0 2 25 2 529.83313 1058.65898 1.99 34.97 3440 3440 MS2 17/18 Linfeng_122411_rIgG_2.raw High SGSPAVLAFAK Unambiguous 1 1 IPI00291755.6 CID 1.0000 0.0000 1 1 337 2.05 0.00 0 27 25 2 524.29462 1047.58196 -1.36 30.00 2802 2802 MS2 13/20 Linfeng_122411_rIgG_2.raw IPI00396485.3 Elongation factor 1-alpha 1 7.58 2 3 3 15 0.00 38.61 7.58 3 15 0.00 462 50.1 9.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EHALLAYTLGVK Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 451 3.58 0.00 0 6 16 3 438.91837 1314.74054 -0.85 31.79 3279 3279 MS2 26/44 Linfeng_122411_rIgG_5.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 438 2.89 0.00 0 7 25 3 468.91263 1404.72333 -2.66 28.02 2762 2762 MS2 25/44 Linfeng_122411_rIgG_5.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 491 2.71 0.00 0 11 25 3 468.91437 1404.72855 1.06 29.41 2896 2896 MS2 18/44 Linfeng_122411_rIgG_6.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 128 2.70 0.00 0 15 25 2 513.30890 1025.61052 0.24 26.55 2515 2515 MS2 16/20 Linfeng_122411_rIgG_6.raw High YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 477 2.69 0.00 0 35 25 3 468.91455 1404.72910 1.45 28.01 2453 2453 MS2 25/44 Linfeng_122411_rIgG_8.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 174 2.68 0.00 0 10 25 2 513.30969 1025.61211 1.79 19.56 1669 1669 MS2 17/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 183 2.53 0.00 0 14 25 2 513.30957 1025.61186 1.55 21.62 1912 1912 MS2 16/20 Linfeng_122411_rIgG_5.raw Medium YYVTIIDAPGHR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 438 2.47 0.00 0 49 25 3 468.91507 1404.73066 2.56 26.58 2104 2104 MS2 23/44 Linfeng_122411_rIgG_9.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 175 2.44 0.00 0 34 25 2 513.30957 1025.61186 1.55 25.31 2292 2292 MS2 16/20 Linfeng_122411_rIgG_4.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 183 2.41 0.00 0 12 25 2 513.30969 1025.61211 1.79 20.59 1789 1789 MS2 16/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 188 2.41 0.00 0 25 25 2 513.30994 1025.61260 2.27 18.55 1559 1559 MS2 15/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 169 2.40 0.00 0 16 25 2 513.31030 1025.61333 2.98 16.53 1362 1362 MS2 14/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 157 2.33 0.00 0 14 14 2 513.30817 1025.60906 -1.18 4.70 569 569 MS2 16/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 175 2.31 0.00 0 19 25 2 513.31024 1025.61321 2.86 17.53 1455 1455 MS2 14/20 Linfeng_122411_rIgG_5.raw High IGGIGTVPVGR Unambiguous 2 1 IPI00396485.3 CID 1.0000 0.0000 1 1 185 2.07 0.00 0 49 25 2 513.31018 1025.61308 2.74 15.51 1278 1278 MS2 15/20 Linfeng_122411_rIgG_5.raw IPI00304885.2 Centromere protein C 1 7.53 3 4 4 4 0.00 13.61 7.53 4 4 943 106.8 9.39 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DINTEQGQNVLEILQDcFEEK Unambiguous 2 1 IPI00304885.2 C17(Carbamidomethyl) CID 1.0000 0.0000 1 1 208 5.63 0.00 0 5 25 3 841.39832 2522.18039 3.47 50.00 5343 5343 MS2 36/80 Linfeng_122411_rIgG_3.raw High TVLDTSYALIGETVNNYR Unambiguous 3 1 IPI00304885.2 CID 1.0000 0.0000 1 1 387 3.22 0.00 0 15 25 3 677.01160 2029.02024 -1.72 43.74 4541 4541 MS2 29/68 Linfeng_122411_rIgG_3.raw Medium FLNAEGSGGIVGHDEISR Unambiguous 2 1 IPI00304885.2 CID 1.0000 0.0000 1 1 327 2.46 0.00 0 19 25 3 619.97607 1857.91367 2.48 27.35 2423 2423 MS2 22/68 Linfeng_122411_rIgG_3.raw High TISPAESTALLQGR Unambiguous 3 1 IPI00304885.2 CID 1.0000 0.0000 1 1 413 2.29 0.00 0 15 25 2 722.39532 1443.78337 2.16 30.43 2827 2827 MS2 18/26 Linfeng_122411_rIgG_3.raw IPI00016494.2 Isoform 2 of Nucleolar protein 10 7.52 2 3 3 3 0.00 9.92 7.52 3 3 638 74.5 8.38 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DLENLGLTHLIGSPFLR Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 259 3.82 0.00 0 11 25 3 632.35278 1895.04380 2.74 45.00 4819 4819 MS2 24/64 Linfeng_122411_rIgG_4.raw High LKEDQQTVLKPQFYEIK Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 260 3.11 0.00 1 7 25 4 527.54248 2107.14809 2.20 29.34 2830 2830 MS2 33/96 Linfeng_122411_rIgG_4.raw High DGQYILATGTYKPR Unambiguous 2 1 IPI00016494.2 CID 1.0000 0.0000 1 1 349 2.99 0.00 0 13 25 3 528.28009 1582.82572 2.08 27.08 2529 2529 MS2 25/52 Linfeng_122411_rIgG_4.raw IPI00011875.2 Protein Red 7.36 3 3 3 3 8.29 7.36 3 3 557 65.6 6.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYERNELFLPGR Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 451 3.17 0.00 1 27 25 3 488.92538 1464.76160 1.47 28.39 2702 2702 MS2 25/44 Linfeng_122411_rIgG_4.raw High DGVNKDYEETELISTTANYR Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 189 2.93 0.00 1 8 25 3 773.36584 2318.08298 2.00 32.24 3208 3208 MS2 25/76 Linfeng_122411_rIgG_4.raw High GLDFALLQK Unambiguous 3 1 IPI00011875.2 CID 1.0000 0.0000 1 1 323 2.19 0.00 0 9 25 2 502.79367 1004.58006 2.49 36.83 3790 3790 MS2 12/16 Linfeng_122411_rIgG_4.raw IPI00909093.1 "cDNA FLJ51295, highly similar to Cell division cycle 5-like protein" 7.35 2 4 4 4 11.57 7.35 4 4 0.00 0.00 775 89.2 8.54 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LVLPAPQISDAELQEVVK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 197 3.51 0.00 0 14 25 3 650.36865 1949.09140 -2.09 41.34 4894 4894 MS2 39/68 Linfeng_091311_rIgG_3.raw High QLNDLWDQIEQAHLELR Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 364 3.07 0.00 0 8 25 3 707.69446 2121.06882 -1.70 44.17 5247 5247 MS2 23/64 Linfeng_091311_rIgG_3.raw High LGLLGLPAPK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 24 2.53 0.00 0 12 25 2 489.81949 978.63170 -3.06 37.13 4363 4363 MS2 17/18 Linfeng_091311_rIgG_3.raw High GVDYNAEIPFEK Unambiguous 2 1 IPI00909093.1 CID 1.0000 0.0000 1 1 216 2.46 0.00 0 15 25 2 691.33344 1381.65959 -2.81 33.30 3869 3869 MS2 17/22 Linfeng_091311_rIgG_3.raw IPI00020127.1 Replication protein A 70 kDa DNA-binding subunit 6.82 1 3 3 3 7.83 6.82 3 3 0.00 616 68.1 7.21 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GWFDAEGQALDGVSISDLK Unambiguous 1 1 IPI00020127.1 CID 1.0000 0.0000 1 1 256 3.17 0.00 0 23 25 2 1004.48486 2007.96245 -1.73 44.60 5298 5298 MS2 21/36 Linfeng_091311_rIgG_4.raw High DSLVDIIGIcK Unambiguous 1 1 IPI00020127.1 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 518 2.51 0.00 0 20 25 2 616.83020 1232.65312 -1.98 41.83 4950 4950 MS2 17/20 Linfeng_091311_rIgG_4.raw High SGGVGGSNTNWK Unambiguous 1 1 IPI00020127.1 CID 1.0000 0.0000 1 1 194 2.15 0.00 0 16 25 2 582.27454 1163.54180 -1.92 20.11 2063 2063 MS2 15/22 Linfeng_091311_rIgG_4.raw IPI00013830.1 SNW domain-containing protein 1 6.72 2 3 3 3 6.48 6.72 3 3 0.00 536 61.5 9.52 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High YTPSQQGVAFNSGAK Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 257 2.38 0.00 0 6 25 2 777.87921 1554.75115 -2.32 24.50 2676 2676 MS2 22/28 Linfeng_091311_rIgG_4.raw High YTDLVPK Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 277 2.08 0.00 0 30 25 2 418.22974 835.45220 -4.58 24.71 2705 2705 MS2 10/12 Linfeng_091311_rIgG_4.raw High DISEVIALGVPNPR Unambiguous 2 1 IPI00013830.1 CID 1.0000 0.0000 1 1 338 2.02 0.00 0 17 25 2 740.41028 1479.81328 -2.28 41.61 4922 4922 MS2 17/26 Linfeng_091311_rIgG_4.raw IPI00878536.1 Putative uncharacterized protein PES1 6.65 3 4 4 4 9.39 6.65 4 4 0.00 571 66.0 7.50 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LEGQAQAEAK Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 293 2.73 0.00 0 24 25 2 522.76947 1044.53166 -0.39 14.11 1215 1215 MS2 15/18 Linfeng_091311_rIgG_4.raw High LQLSLADFR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 294 2.29 0.00 0 6 25 2 531.79919 1062.59111 -2.97 38.95 4586 4586 MS2 14/16 Linfeng_091311_rIgG_4.raw High GSATNYITR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 314 2.22 0.00 0 22 25 2 491.75012 982.49297 -2.33 21.38 2240 2240 MS2 13/16 Linfeng_091311_rIgG_4.raw High LAALSASLAR Unambiguous 3 1 IPI00878536.1 CID 1.0000 0.0000 1 1 513 2.15 0.00 0 33 25 2 486.79446 972.58165 -2.12 28.93 3283 3283 MS2 16/18 Linfeng_091311_rIgG_4.raw IPI00032374.4 Isoform 2 of Ribosomal RNA processing protein 1 homolog B 6.22 2 3 3 3 0.00 8.46 6.22 3 3 740 82.1 9.80 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VFcVEEEDSESSLQK Unambiguous 2 1 IPI00032374.4 C3(Carbamidomethyl) CID 1.0000 0.0000 1 1 105 3.39 0.00 0 6 25 2 893.39880 1785.79033 3.09 26.42 2298 2298 MS2 19/28 Linfeng_122411_rIgG_3.raw High VGDGDLSAEEIPENEVSLRR Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 353 3.07 0.00 1 3 25 3 729.03052 2185.07700 1.72 30.02 2775 2775 MS2 27/76 Linfeng_122411_rIgG_3.raw High SILVSPTGPSR Unambiguous 2 1 IPI00032374.4 CID 1.0000 0.0000 1 1 335 2.00 0.00 0 14 15 2 557.31561 1113.62395 -2.11 4.34 479 479 MS2 11/20 Linfeng_122411_rIgG_3.raw IPI00292135.1 Lamin-B receptor 6.18 1 3 3 10 28.86 6.18 3 10 615 70.7 9.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 208 5.00 0.00 0 5 25 2 1015.48395 2029.96062 -0.42 44.88 5062 5062 MS2 26/36 Linfeng_122411_rIgG_5.raw High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 230 4.50 0.00 0 5 25 2 1015.48846 2029.96965 4.03 44.97 4861 4861 MS2 24/36 Linfeng_122411_rIgG_6.raw High NDLSPASSGNAVYDFFIGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 249 3.89 0.00 0 5 25 3 677.32745 2029.96781 3.12 44.94 4858 4858 MS2 33/72 Linfeng_122411_rIgG_6.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 275 2.40 0.00 0 35 25 2 578.32330 1155.63933 2.12 19.78 1692 1692 MS2 15/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 269 2.39 0.00 0 29 25 2 578.32330 1155.63933 2.12 20.78 1812 1812 MS2 15/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 320 2.30 0.00 0 54 25 2 578.32397 1155.64067 3.28 17.74 1478 1478 MS2 14/20 Linfeng_122411_rIgG_5.raw High TFEVTPIR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 347 2.18 0.00 0 21 25 2 481.76883 962.53038 -0.23 26.46 2547 2547 MS2 11/14 Linfeng_122411_rIgG_5.raw High TFEVTPIR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 361 2.11 0.00 0 10 25 2 481.76962 962.53197 1.42 28.02 2711 2711 MS2 10/14 Linfeng_122411_rIgG_6.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 262 2.07 0.00 0 39 25 2 578.32367 1155.64006 2.75 18.76 1583 1583 MS2 12/20 Linfeng_122411_rIgG_5.raw High VVEGTPLIDGR Unambiguous 1 1 IPI00292135.1 CID 1.0000 0.0000 1 1 286 2.02 0.00 0 67 25 2 578.32324 1155.63921 2.01 21.83 1939 1939 MS2 13/20 Linfeng_122411_rIgG_5.raw IPI00031627.4 DNA-directed RNA polymerase II subunit RPB1 6.04 1 8 8 8 23.80 6.04 8 8 1970 217.0 7.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TVITPDPNLSIDQVGVPR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 309 3.79 0.00 0 32 25 3 641.01953 1921.04404 2.62 35.59 3517 3517 MS2 29/68 Linfeng_122411_rIgG_2.raw High INISQVIAVVGQQNVEGK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 216 3.52 0.00 0 19 25 3 632.69135 1896.05948 2.37 42.40 4379 4379 MS2 34/68 Linfeng_122411_rIgG_2.raw High TTSNDIVEIFTVLGIEAVR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 300 3.49 0.00 0 46 25 3 693.04755 2077.12809 5.02 55.06 5926 5926 MS2 23/72 Linfeng_122411_rIgG_2.raw High ELYHVISFDGSYVNYR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 267 2.90 0.00 0 8 25 3 654.65161 1961.94028 0.53 35.86 3550 3550 MS2 25/60 Linfeng_122411_rIgG_2.raw High TPSLTVFLLGQSAR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 253 2.90 0.00 0 13 25 3 497.28525 1489.84119 2.56 41.94 4320 4320 MS2 23/52 Linfeng_122411_rIgG_2.raw High NSINQVVQLR Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 337 2.80 0.00 0 15 25 2 585.83423 1170.66118 1.87 27.18 2426 2426 MS2 15/18 Linfeng_122411_rIgG_2.raw High IIITEDGEFK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 384 2.29 0.00 0 49 25 2 582.81207 1164.61687 1.83 29.60 2748 2748 MS2 16/18 Linfeng_122411_rIgG_2.raw High FGVEQPEGDEDLTK Unambiguous 1 1 IPI00031627.4 CID 1.0000 0.0000 1 1 179 2.11 0.00 0 32 25 2 782.36383 1563.72038 1.91 25.94 2260 2260 MS2 15/26 Linfeng_122411_rIgG_2.raw IPI00940901.1 Isoform 2 of RRP12-like protein 6.02 3 4 4 5 16.66 6.02 4 5 0.00 1197 132.6 8.68 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NFLPILFNLYGQPVAAGDTPAPR Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 271 4.29 0.00 0 13 25 3 824.44067 2471.30747 -0.32 49.50 5989 5989 MS2 37/88 Linfeng_091311_rIgG_2.raw High NFLPILFNLYGQPVAAGDTPAPR Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 271 4.15 0.00 0 33 25 3 824.44281 2471.31388 2.27 49.60 5930 5930 MS2 28/88 Linfeng_091311_rIgG_3.raw High LSVLDLVVALAPcADEAAISK Unambiguous 3 1 IPI00940901.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 252 2.85 0.00 0 6 25 3 719.06293 2155.17423 2.89 54.73 6593 6593 MS2 33/80 Linfeng_091311_rIgG_2.raw High APAHHPAAISTAK Unambiguous 3 1 IPI00940901.1 CID 1.0000 0.0000 1 1 408 2.77 0.00 0 0 25 3 424.56503 1271.68055 -3.94 12.55 1038 1038 MS2 24/48 Linfeng_091311_rIgG_2.raw High EFITALIPEVILcTK Unambiguous 3 1 IPI00940901.1 C13(Carbamidomethyl) CID 1.0000 0.0000 1 1 288 2.60 0.00 0 10 25 3 582.99597 1746.97336 1.29 51.07 6186 6186 MS2 24/56 Linfeng_091311_rIgG_2.raw IPI00306723.3 CCAAT/enhancer-binding protein zeta 5.88 1 4 4 4 12.49 5.88 4 4 1054 120.9 5.94 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GAIDDLQQGELEAFIQNLNLAK Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 351 5.00 0.00 0 28 25 3 800.75238 2400.24259 0.81 51.89 6288 6288 MS2 37/84 Linfeng_091311_rIgG_2.raw High ELLITDLLPDNR Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 323 2.75 0.00 0 61 25 2 706.39209 1411.77690 -1.62 44.62 5304 5304 MS2 16/22 Linfeng_091311_rIgG_3.raw High ALTVAHELLcNKPEEEK Unambiguous 1 1 IPI00306723.3 C10(Carbamidomethyl) CID 1.0000 0.0000 1 1 402 2.53 0.00 0 20 25 3 661.00519 1981.00101 -2.52 27.59 3144 3144 MS2 23/64 Linfeng_091311_rIgG_2.raw High AIVSSGTLGDR Unambiguous 1 1 IPI00306723.3 CID 1.0000 0.0000 1 1 631 2.20 0.00 0 34 25 2 538.28912 1075.57097 -3.07 23.98 2642 2642 MS2 18/20 Linfeng_091311_rIgG_2.raw IPI00005024.3 Isoform 1 of Myb-binding protein 1A 5.87 3 6 6 7 18.97 5.87 6 7 1328 148.8 9.28 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High EFLDFFWDIAKPEQETR Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 268 3.22 0.00 0 22 25 3 724.35315 2171.04489 0.18 49.48 5987 5987 MS2 20/64 Linfeng_091311_rIgG_2.raw High VLDLVEVLVTK Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 159 3.10 0.00 0 41 25 2 614.38000 1227.75273 -2.60 45.09 5430 5430 MS2 17/20 Linfeng_091311_rIgG_2.raw High FLSPPALQGYVAWLR Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 358 2.79 0.00 0 0 25 3 573.31696 1717.93631 -3.61 47.53 5743 5743 MS2 30/56 Linfeng_091311_rIgG_2.raw High ALVDILSEVSK Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 394 2.77 0.00 0 14 25 2 587.33820 1173.66911 -2.96 42.12 5056 5056 MS2 18/20 Linfeng_091311_rIgG_2.raw High HPFSFPLENQAR Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 310 2.57 0.00 0 18 25 3 481.57553 1442.71204 -3.84 31.77 3709 3709 MS2 21/44 Linfeng_091311_rIgG_2.raw High ATLQEILPEVLK Unambiguous 3 1 IPI00005024.3 CID 1.0000 0.0000 1 1 201 2.36 0.00 0 33 25 2 677.40222 1353.79717 -1.25 43.30 5204 5204 MS2 17/22 Linfeng_091311_rIgG_2.raw High VLDLVEVLVTK Unambiguous 2 1 IPI00005024.3 CID 1.0000 0.0000 1 1 170 2.16 0.00 0 34 25 2 614.38068 1227.75408 -1.51 45.32 5388 5388 MS2 16/20 Linfeng_091311_rIgG_4.raw IPI00236554.1 Isoform H14 of Myeloperoxidase 5.85 3 3 3 4 10.87 5.85 3 4 650 73.8 9.11 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FPTDQLTPDQER Unambiguous 3 1 IPI00236554.1 CID 1.0000 0.0000 1 1 233 3.06 0.00 0 7 25 2 723.84503 1446.68279 -2.23 28.44 3318 3318 MS2 18/22 Linfeng_091311_rIgG_10.raw High VGPLLAcIIGTQFR Unambiguous 3 1 IPI00236554.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 381 2.97 0.00 0 55 25 3 515.62311 1544.85477 -4.57 45.75 5573 5573 MS2 26/52 Linfeng_091311_rIgG_10.raw High VGPLLAcIIGTQFR Unambiguous 3 1 IPI00236554.1 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 275 2.57 0.00 0 33 25 2 772.93170 1544.85613 -3.69 45.78 5577 5577 MS2 19/26 Linfeng_091311_rIgG_10.raw High VVLEGGIDPILR Unambiguous 3 1 IPI00236554.1 CID 1.0000 0.0000 1 1 160 2.26 0.00 0 7 25 2 640.87994 1280.75261 -3.69 36.90 4446 4446 MS2 17/22 Linfeng_091311_rIgG_10.raw IPI00031522.2 "Trifunctional enzyme subunit alpha, mitochondrial" 5.77 1 3 3 4 11.98 5.77 3 4 763 82.9 9.04 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TLQEVTQLSQEAQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 502 3.76 0.00 0 31 25 3 544.28510 1630.84073 0.72 29.06 2792 2792 MS2 32/52 Linfeng_122411_rIgG_4.raw High TLQEVTQLSQEAQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 504 3.61 0.00 0 16 25 2 815.92535 1630.84343 2.38 29.09 2796 2796 MS2 21/26 Linfeng_122411_rIgG_4.raw High TVLGTPEVLLGALPGAGGTQR Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 186 2.55 0.00 0 20 25 3 669.71490 2007.13016 3.35 41.91 4427 4427 MS2 32/80 Linfeng_122411_rIgG_4.raw High FVDLYGAQK Unambiguous 1 1 IPI00031522.2 CID 1.0000 0.0000 1 1 333 2.06 0.00 0 25 25 2 520.77545 1040.54363 2.37 26.99 2516 2516 MS2 13/16 Linfeng_122411_rIgG_4.raw IPI00170548.1 Isoform 1 of ATPase family AAA domain-containing protein 2 5.61 1 4 6 8 12.01 4.75 5 5 8.24 2.81 3 3 1390 158.5 6.32 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AVLQALEVLPVAPPPEPR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 112 3.57 0.00 0 37 25 3 632.70502 1896.10050 2.68 41.01 4202 4202 MS2 32/68 Linfeng_122411_rIgG_2.raw High AVLQALEVLPVAPPPEPR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 117 3.03 0.00 0 31 25 3 632.70221 1896.09208 -1.76 42.22 5068 5068 MS2 31/68 Linfeng_091311_rIgG_2.raw High SQVEQQQLITVEK Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 464 2.78 0.00 0 23 25 2 765.41052 1529.81377 -2.13 27.30 3105 3105 MS2 20/24 Linfeng_091311_rIgG_2.raw High GcLFYGPPGTGK Unambiguous 3 2 IPI00170548.1;IPI00456004.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 2.43 0.00 0 28 25 2 627.30408 1253.60088 2.00 29.07 2680 2680 MS2 17/22 Linfeng_122411_rIgG_2.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 365 2.24 0.00 0 66 25 2 500.27814 999.54900 2.01 25.76 2236 2236 MS2 13/16 Linfeng_122411_rIgG_2.raw High LEEQEEDTFR Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 115 2.11 0.00 0 38 25 2 648.28979 1295.57231 -2.12 23.91 2633 2633 MS2 16/18 Linfeng_091311_rIgG_2.raw High KISQAKDDSQNAIDHK Unambiguous 1 1 IPI00170548.1 CID 1.0000 0.0000 1 1 317 2.07 0.00 2 19 25 2 899.46381 1797.92034 6.28 32.00 3629 3629 MS2 8/30 Linfeng_091311_rIgG_5.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 312 2.03 0.00 0 25 25 2 500.27542 999.54357 -3.43 28.78 3307 3307 MS2 14/16 Linfeng_091311_rIgG_2.raw IPI00879819.1 Lamin-B2 5.33 2 2 3 3 7.94 5.33 3 3 600 67.6 5.35 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GLESDVAELR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 392 3.07 0.00 0 25 25 2 544.78131 1088.55535 -2.71 31.13 3576 3576 MS2 16/18 Linfeng_091311_rIgG_4.raw High ATSSSSGSLSATGR Unambiguous 2 1 IPI00879819.1 CID 1.0000 0.0000 1 1 229 2.64 0.00 0 9 25 2 634.80615 1268.60503 -2.15 16.07 1493 1493 MS2 19/26 Linfeng_091311_rIgG_4.raw High LLEGEEER Unambiguous 15 3 IPI00879819.1;IPI00021405.3;IPI00217975.4 CID 1.0000 0.0000 1 1 246 2.23 0.00 0 9 17 2 487.74222 974.47716 -1.86 19.80 2019 2019 MS2 13/14 Linfeng_091311_rIgG_4.raw IPI00419273.5 Isoform 1 of Cullin-4A 5.27 2 3 3 3 7.81 5.27 3 3 759 87.6 8.13 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LKHEcGAAFTSK Unambiguous 2 1 IPI00419273.5 C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 363 2.89 0.00 1 22 25 3 450.22699 1348.66642 -1.07 15.16 1374 1374 MS2 24/44 Linfeng_091311_rIgG_3.raw High YNLEELYQAVENLcSHK Unambiguous 2 1 IPI00419273.5 C14(Carbamidomethyl) CID 1.0000 0.0000 1 1 223 2.52 0.00 0 14 25 3 704.00183 2109.99094 -0.05 46.81 5579 5579 MS2 23/64 Linfeng_091311_rIgG_3.raw High TIDGILLLIER Unambiguous 2 1 IPI00419273.5 CID 1.0000 0.0000 1 1 197 2.39 0.00 0 17 25 2 628.38464 1255.76201 -0.06 47.66 5685 5685 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00642510.3 testis-expressed sequence 10 protein isoform 2 5.15 2 3 3 3 10.59 5.15 3 3 0.00 913 103.8 9.36 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NPELSTQLIDIIHTAAAR Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 314 3.75 0.00 0 18 25 3 655.02448 1963.05887 -0.98 43.86 5209 5209 MS2 31/68 Linfeng_091311_rIgG_3.raw High VLDILLEQYPALITGR Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 148 3.63 0.00 0 24 25 3 605.35181 1814.04087 -0.79 47.00 5602 5602 MS2 33/60 Linfeng_091311_rIgG_3.raw High LAAVQLLQFLAPK Unambiguous 2 1 IPI00642510.3 CID 1.0000 0.0000 1 1 84 3.20 0.00 0 14 25 2 706.43695 1411.86662 -0.42 49.63 5934 5934 MS2 17/24 Linfeng_091311_rIgG_3.raw IPI00005675.3 NF-kappa-B-repressing factor 5.07 2 3 3 3 7.97 5.07 3 3 690 77.6 8.79 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High SESHTDLTFSR Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 143 3.14 0.00 0 11 25 3 427.20056 1279.58713 -3.31 22.82 2446 2446 MS2 23/40 Linfeng_091311_rIgG_3.raw High DASGQPIFNASAK Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 280 2.47 0.00 0 10 25 2 653.32233 1305.63738 -4.63 26.62 2975 2975 MS2 17/24 Linfeng_091311_rIgG_3.raw High TNPEYIYAPLK Unambiguous 2 1 IPI00005675.3 CID 1.0000 0.0000 1 1 350 2.36 0.00 0 60 25 2 654.84344 1308.67961 -2.94 31.76 3669 3669 MS2 17/20 Linfeng_091311_rIgG_3.raw IPI00894141.2 DNA-directed RNA polymerase 5.06 3 3 3 4 0.00 11.49 5.06 3 4 1167 133.0 7.15 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GEIGDATPFNDAVNVQK Unambiguous 3 1 IPI00894141.2 CID 1.0000 0.0000 1 1 481 3.53 0.00 0 44 100 2 887.93658 1774.86589 2.92 35.81 3303 3303 MS2 16/32 Linfeng_20120130_CHD1_2.raw High TVTLPENEDELESTNR Unambiguous 3 1 IPI00894141.2 CID 1.0000 0.0000 1 1 373 2.82 0.00 0 15 100 2 923.94061 1846.87395 3.99 30.87 2390 2390 MS2 15/30 Linfeng_20120130_CHD1_2.raw High IVEDAPPIDLQAEAQHASGEVEEPPR Unambiguous 3 1 IPI00894141.2 CID 1.0000 0.0000 1 1 571 2.62 0.00 0 15 100 3 933.13135 2797.37949 5.52 39.91 4181 4181 MS2 27/100 Linfeng_20120130_CHD1_2.raw High IVEDAPPIDLQAEAQHASGEVEEPPR Unambiguous 3 1 IPI00894141.2 CID 1.0000 0.0000 1 1 575 2.53 0.00 0 8 100 3 933.13013 2797.37583 4.21 39.81 4163 4163 MS2 24/100 Linfeng_20120130_CHD1_2.raw IPI00019912.3 Peroxisomal multifunctional enzyme type 2 5.03 1 3 3 3 7.80 5.03 3 3 736 79.6 8.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AYALAFAER Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 354 2.76 0.00 0 30 25 2 506.26740 1011.52751 1.64 30.36 2963 2963 MS2 15/16 Linfeng_122411_rIgG_4.raw High VVLVTGAGAGLGR Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 179 2.57 0.00 0 43 25 2 585.35437 1169.70146 1.11 28.02 2653 2653 MS2 20/24 Linfeng_122411_rIgG_4.raw High LGLLGLANSLAIEGR Unambiguous 1 1 IPI00019912.3 CID 1.0000 0.0000 1 1 128 2.47 0.00 0 28 25 2 748.94556 1496.88384 2.84 43.58 4638 4638 MS2 19/28 Linfeng_122411_rIgG_4.raw IPI00186290.6 Elongation factor 2 5.01 1 3 3 3 7.68 5.01 3 3 858 95.3 6.83 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High STAISLFYELSENDLNFIK Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 361 2.98 0.00 0 21 25 3 735.37781 2204.11887 3.02 51.12 5482 5482 MS2 26/72 Linfeng_122411_rIgG_3.raw High EGIPALDNFLDKL Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 446 2.36 0.00 1 23 25 2 722.89081 1444.77434 4.18 49.53 5030 5030 MS2 13/24 Linfeng_122411_rIgG_9.raw High VFSGLVSTGLK Unambiguous 1 1 IPI00186290.6 CID 1.0000 0.0000 1 1 254 2.34 0.00 0 16 25 2 554.32495 1107.64263 1.57 30.97 2679 2679 MS2 18/20 Linfeng_122411_rIgG_9.raw IPI00102815.1 Nucleolar complex protein 3 homolog 5.00 2 3 3 3 8.35 5.00 3 3 0.00 800 92.5 9.17 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FLQGDSFLNEDLNQLIK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 361 3.95 0.00 0 27 25 3 665.34613 1994.02384 0.41 45.71 5441 5441 MS2 31/64 Linfeng_091311_rIgG_3.raw High LGQASLGVIK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 215 2.37 0.00 0 46 25 2 493.30417 985.60106 -3.10 28.03 3167 3167 MS2 15/18 Linfeng_091311_rIgG_3.raw High SPLLPAVLEGLAK Unambiguous 2 1 IPI00102815.1 CID 1.0000 0.0000 1 1 98 2.04 0.00 0 36 25 2 654.39972 1307.79216 -0.94 44.20 5251 5251 MS2 17/24 Linfeng_091311_rIgG_3.raw IPI00291916.5 PH-interacting protein 5.00 1 6 6 6 15.63 5.00 6 6 1821 206.5 8.85 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LGPLLEQEIPQSVPGVQTLLGAGR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 80 3.31 0.00 0 5 25 3 824.80182 2472.39090 3.53 45.32 4751 4751 MS2 29/92 Linfeng_122411_rIgG_2.raw High YHDMPDVIDFLVLR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 429 2.91 0.00 0 28 25 3 578.29761 1732.87827 3.17 46.42 4891 4891 MS2 23/52 Linfeng_122411_rIgG_2.raw Medium SLIYKPLDGEWGTNPRDEEcER Unambiguous 1 1 IPI00291916.5 C20(Carbamidomethyl) CID 1.0000 0.0000 1 1 167 2.83 0.00 1 14 25 4 666.81573 2664.24111 1.93 31.14 2951 2951 MS2 29/126 Linfeng_122411_rIgG_2.raw High VYFFGSGQPEK Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 269 2.34 0.00 0 47 25 2 629.81061 1258.61394 2.88 30.73 2897 2897 MS2 16/20 Linfeng_122411_rIgG_2.raw High IFTGSDDcLVK Unambiguous 1 1 IPI00291916.5 C8(Carbamidomethyl) CID 1.0000 0.0000 1 1 228 2.20 0.00 0 40 25 2 627.80634 1254.60539 1.49 26.96 2397 2397 MS2 17/20 Linfeng_122411_rIgG_2.raw High SELYFLIAR Unambiguous 1 1 IPI00291916.5 CID 1.0000 0.0000 1 1 308 2.05 0.00 0 15 25 2 556.31256 1111.61785 2.86 39.24 3979 3979 MS2 14/16 Linfeng_122411_rIgG_2.raw IPI00556218.1 Isoform 4 of Nucleolar protein 6 4.99 3 4 4 4 10.98 4.99 4 4 0.00 1143 127.2 7.64 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GQSPAGDGSPEPPTPR Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 196 3.19 0.00 0 6 25 2 775.36407 1549.72087 -2.15 20.88 2207 2207 MS2 20/30 Linfeng_091311_rIgG_2.raw High TVFRPPLDIYDVLIR Unambiguous 2 1 IPI00556218.1 CID 1.0000 0.0000 1 1 172 3.01 0.00 0 5 25 3 606.34760 1817.02823 -2.11 45.15 5439 5439 MS2 37/56 Linfeng_091311_rIgG_2.raw High ETSSTGEEALVAAVR Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 381 2.47 0.00 0 4 25 2 760.38147 1519.75566 -2.80 31.37 3656 3656 MS2 20/28 Linfeng_091311_rIgG_2.raw High FLFLVSTFDWK Unambiguous 3 1 IPI00556218.1 CID 1.0000 0.0000 1 1 448 2.32 0.00 0 33 25 2 701.87360 1402.73992 -0.50 50.07 6061 6061 MS2 16/20 Linfeng_091311_rIgG_2.raw IPI00889723.2 C4A protein 4.83 11 7 7 25 46.04 4.83 7 16 30.81 2.89 3 9 0.00 1698 187.6 7.12 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 395 4.36 0.00 0 14 25 2 771.41083 1541.81438 -1.73 27.67 3118 3118 MS2 22/28 Linfeng_091311_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 187 4.27 0.00 0 7 25 3 695.72949 2085.17392 1.71 42.78 4417 4417 MS2 33/84 Linfeng_122411_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 175 4.07 0.00 0 6 25 3 695.73053 2085.17704 3.20 42.54 4506 4506 MS2 31/84 Linfeng_122411_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 377 4.05 0.00 0 11 25 2 771.41071 1541.81413 -1.89 27.77 3125 3125 MS2 22/28 Linfeng_091311_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 386 4.02 0.00 0 2 25 2 771.41437 1541.82146 2.87 22.80 1841 1841 MS2 21/28 Linfeng_122411_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 407 3.98 0.00 0 31 25 2 771.41388 1541.82048 2.23 25.02 2254 2254 MS2 22/28 Linfeng_122411_rIgG_4.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 196 3.55 0.00 0 29 25 3 695.72699 2085.16642 -1.89 43.40 5151 5151 MS2 33/84 Linfeng_091311_rIgG_3.raw High ASAGLLGAHAAAITAYALTLTK Unambiguous 9 1 IPI00889723.2 CID 1.0000 0.0000 1 1 196 3.51 0.00 0 10 25 3 695.72705 2085.16660 -1.80 43.51 5162 5162 MS2 34/84 Linfeng_091311_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 347 3.42 0.00 0 6 25 2 771.40967 1541.81206 -3.23 28.09 3159 3159 MS2 22/28 Linfeng_091311_rIgG_6.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 404 3.40 0.00 0 21 25 2 771.41455 1541.82182 3.10 21.79 1730 1730 MS2 19/28 Linfeng_122411_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 403 3.27 0.00 0 19 25 3 514.60913 1541.81284 -2.73 27.78 3133 3133 MS2 26/56 Linfeng_091311_rIgG_3.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 347 3.21 0.00 0 14 25 2 771.41003 1541.81279 -2.76 28.05 3102 3102 MS2 19/28 Linfeng_091311_rIgG_5.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 407 3.00 0.00 0 35 25 3 514.61145 1541.81980 1.79 25.00 2250 2250 MS2 29/56 Linfeng_122411_rIgG_4.raw High YLDKTEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 313 2.75 0.00 1 7 25 3 645.99335 1935.96549 -2.28 29.46 3361 3361 MS2 30/60 Linfeng_091311_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 372 2.71 0.00 0 15 25 2 684.36658 1367.72588 3.86 47.11 4976 4976 MS2 18/22 Linfeng_122411_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 329 2.70 0.00 0 16 25 2 684.36560 1367.72392 2.43 47.04 5075 5075 MS2 18/22 Linfeng_122411_rIgG_4.raw High VLSLAQEQVGGSPEK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 430 2.65 0.00 0 22 25 3 514.61182 1541.82090 2.50 22.30 1788 1788 MS2 16/56 Linfeng_122411_rIgG_3.raw High TEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 321 2.52 0.00 0 20 25 2 708.85205 1416.69682 -2.66 28.44 3218 3218 MS2 17/22 Linfeng_091311_rIgG_4.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 369 2.47 0.00 0 21 25 2 684.36334 1367.71941 -0.87 48.40 5779 5779 MS2 17/22 Linfeng_091311_rIgG_3.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 371 2.40 0.00 0 21 25 2 684.36371 1367.72014 -0.34 48.50 5791 5791 MS2 18/22 Linfeng_091311_rIgG_4.raw High TEQWSTLPPETK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 333 2.17 0.00 0 20 25 2 708.85266 1416.69805 -1.80 28.51 3233 3233 MS2 15/22 Linfeng_091311_rIgG_3.raw High DHAVDLIQK Unambiguous 11 1 IPI00889723.2 CID 1.0000 0.0000 1 1 330 2.14 0.00 0 11 25 2 519.78156 1038.55583 -1.97 23.08 2477 2477 MS2 14/16 Linfeng_091311_rIgG_4.raw High DSSTWLTAFVLK Unambiguous 8 1 IPI00889723.2 CID 1.0000 0.0000 1 1 353 2.12 0.00 0 47 25 2 684.36487 1367.72246 1.36 50.09 5991 5991 MS2 16/22 Linfeng_091311_rIgG_3.raw High ANSFLGEK Unambiguous 7 1 IPI00889723.2 CID 1.0000 0.0000 1 1 343 2.07 0.00 0 46 25 2 433.22275 865.43822 -3.73 23.52 2545 2545 MS2 11/14 Linfeng_091311_rIgG_3.raw High ANSFLGEK Unambiguous 7 1 IPI00889723.2 CID 1.0000 0.0000 1 1 317 2.02 0.00 0 23 25 2 433.22278 865.43828 -3.66 23.65 2558 2558 MS2 11/14 Linfeng_091311_rIgG_4.raw IPI00018213.5 Leucine-rich repeat-containing protein 8D 4.55 1 3 3 3 9.29 4.55 3 3 858 98.1 7.72 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FTDVAEIPAWVYLLK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 241 3.39 0.00 0 33 25 2 882.98639 1764.96550 4.73 49.29 5253 5253 MS2 18/28 Linfeng_122411_rIgG_3.raw High VEHFVSILGK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 478 3.11 0.00 0 14 25 3 376.88629 1128.64432 2.75 29.26 2673 2673 MS2 20/36 Linfeng_122411_rIgG_3.raw High VPSNITDVAPHLTK Unambiguous 1 1 IPI00018213.5 CID 1.0000 0.0000 1 1 387 2.79 0.00 0 26 25 3 497.94461 1491.81928 1.77 27.15 2396 2396 MS2 26/52 Linfeng_122411_rIgG_3.raw IPI00790135.1 79 kDa protein 4.32 4 3 3 3 6.54 4.32 3 3 695 79.2 6.89 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FEEQGDFESEK Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 23 2.37 0.00 0 7 25 2 672.78113 1344.55498 -3.05 24.21 2641 2641 MS2 17/20 Linfeng_091311_rIgG_3.raw High YVLEEAQR Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 346 2.15 0.00 0 41 25 2 504.25931 1007.51134 -4.30 23.36 2522 2522 MS2 11/14 Linfeng_091311_rIgG_3.raw High VVLPTFILEPR Unambiguous 4 1 IPI00790135.1 CID 1.0000 0.0000 1 1 182 2.03 0.00 0 45 25 2 642.38861 1283.76995 -1.80 43.07 5110 5110 MS2 16/20 Linfeng_091311_rIgG_3.raw IPI00399316.1 Isoform 2 of PR domain zinc finger protein 10 4.20 6 3 3 4 11.55 4.20 3 4 1023 116.4 7.27 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AVTSGHYVLSESQSELEEK Unambiguous 6 1 IPI00399316.1 CID 1.0000 0.0000 1 1 538 3.87 0.00 0 18 100 3 698.34161 2093.01029 3.30 33.31 2824 2824 MS2 26/72 Linfeng_20120130_CHD1_2.raw High ITSTDYDSFTFK Unambiguous 6 1 IPI00399316.1 CID 1.0000 0.0000 1 1 324 2.84 0.00 0 5 100 2 712.83551 1424.66374 4.00 38.94 3971 3971 MS2 13/22 Linfeng_20120130_CHD1_2.raw High ITSTDYDSFTFK Unambiguous 6 1 IPI00399316.1 CID 1.0000 0.0000 1 1 340 2.65 0.00 0 7 100 2 712.83600 1424.66472 4.69 38.84 3949 3949 MS2 14/22 Linfeng_20120130_CHD1_2.raw High TQFGPVEGPLVR Unambiguous 6 1 IPI00399316.1 CID 1.0000 0.0000 1 1 463 2.19 0.00 0 11 100 2 650.35864 1299.71001 3.37 38.69 3920 3920 MS2 13/22 Linfeng_20120130_CHD1_2.raw IPI00759472.1 Isoform 2 of Inner centromere protein 3.94 2 3 3 4 0.00 10.55 3.94 3 4 914 104.9 9.45 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High VLAPILPDNFSTPTGSR Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 372 3.17 0.00 0 9 25 3 595.65729 1784.95731 1.74 37.28 3706 3706 MS2 26/64 Linfeng_122411_rIgG_3.raw High LLNVEVPQK Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 170 2.58 0.00 0 36 25 2 520.31219 1039.61711 2.35 25.84 2220 2220 MS2 14/16 Linfeng_122411_rIgG_3.raw High VPSSLAYSLK Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 341 2.40 0.00 0 15 25 2 532.80402 1064.60076 1.96 27.07 2385 2385 MS2 14/18 Linfeng_122411_rIgG_3.raw High VLAPILPDNFSTPTGSR Unambiguous 2 1 IPI00759472.1 CID 1.0000 0.0000 1 1 321 2.40 0.00 0 11 25 2 892.98260 1784.95793 2.09 37.33 3711 3711 MS2 18/32 Linfeng_122411_rIgG_3.raw IPI00178047.6 Putative uncharacterized protein PELP1 3.85 4 3 3 3 7.97 3.85 3 3 1038 109.8 4.30 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High LLLLESVSGLLQPR Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 66 3.39 0.00 0 19 25 3 513.31421 1537.92807 -2.09 48.65 5883 5883 MS2 32/52 Linfeng_091311_rIgG_2.raw High LPSLGAGFSQGLK Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 402 2.32 0.00 0 70 25 2 637.85577 1274.70427 -4.79 35.24 4165 4165 MS2 18/24 Linfeng_091311_rIgG_2.raw High LLPQVLNSWSIGR Unambiguous 4 1 IPI00178047.6 CID 1.0000 0.0000 1 1 224 2.26 0.00 0 34 25 2 741.92377 1482.84026 -1.71 41.71 5003 5003 MS2 20/24 Linfeng_091311_rIgG_2.raw IPI00759742.2 Isoform 1 of Bromodomain adjacent to zinc finger domain protein 2A 3.83 3 4 4 4 12.68 3.83 4 4 1878 208.3 6.60 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High GQDSEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHK Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 183 4.61 0.00 0 1 25 4 974.99823 3896.97109 1.83 31.36 2979 2979 MS2 41/204 Linfeng_122411_rIgG_2.raw High DGEVDATASSIPELER Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 220 3.22 0.00 0 3 25 2 844.90405 1688.80083 2.01 31.85 3044 3044 MS2 22/30 Linfeng_122411_rIgG_2.raw High SGYSLNFSEGDGR Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 73 2.77 0.00 0 16 25 2 694.80945 1388.61162 2.79 29.35 2716 2716 MS2 18/24 Linfeng_122411_rIgG_2.raw High DNVSEILR Unambiguous 3 1 IPI00759742.2 CID 1.0000 0.0000 1 1 446 2.08 0.00 0 28 25 2 473.25397 945.50066 0.66 27.21 2431 2431 MS2 13/14 Linfeng_122411_rIgG_2.raw IPI00456004.5 Isoform 2 of ATPase family AAA domain-containing protein 2B 3.65 2 3 5 5 11.96 3.65 5 5 1453 164.2 6.92 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TPEEScAQIFR Unambiguous 2 1 IPI00456004.5 C6(Carbamidomethyl) CID 1.0000 0.0000 1 1 170 2.63 0.00 0 31 25 2 669.31311 1337.61894 2.59 24.19 2031 2031 MS2 16/20 Linfeng_122411_rIgG_2.raw High AEDLASGILR Unambiguous 2 1 IPI00456004.5 CID 1.0000 0.0000 1 1 622 2.55 0.00 0 25 25 2 522.78894 1044.57060 2.05 30.34 2847 2847 MS2 17/18 Linfeng_122411_rIgG_2.raw High GcLFYGPPGTGK Unambiguous 3 2 IPI00170548.1;IPI00456004.5 C2(Carbamidomethyl) CID 1.0000 0.0000 1 1 260 2.43 0.00 0 28 25 2 627.30408 1253.60088 2.00 29.07 2680 2680 MS2 17/22 Linfeng_122411_rIgG_2.raw High LDSIDPALR Unambiguous 3 2 IPI00170548.1;IPI00456004.5 CID 1.0000 0.0000 1 1 365 2.24 0.00 0 66 25 2 500.27814 999.54900 2.01 25.76 2236 2236 MS2 13/16 Linfeng_122411_rIgG_2.raw High SFNNILAVLQK Unambiguous 2 1 IPI00456004.5 CID 1.0000 0.0000 1 1 216 2.11 0.00 0 24 25 2 623.86328 1246.71929 3.08 40.91 4189 4189 MS2 15/20 Linfeng_122411_rIgG_2.raw IPI00479823.3 Putative uncharacterized protein RSF1 3.64 3 4 4 4 12.72 3.64 4 4 1400 159.2 5.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High RGEGEDEVEEESTALQK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 149 3.80 0.00 1 9 25 3 635.96240 1905.87265 2.80 24.06 2015 2015 MS2 26/64 Linfeng_122411_rIgG_2.raw High YLcEcQFDDNLK Unambiguous 3 1 IPI00479823.3 C3(Carbamidomethyl); C5(Carbamidomethyl) CID 1.0000 0.0000 1 1 26 3.52 0.00 0 6 25 2 802.84174 1604.67620 2.61 29.56 2743 2743 MS2 20/22 Linfeng_122411_rIgG_2.raw High NRNELAETLALLK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 378 3.27 0.00 1 8 25 3 495.61951 1484.84397 0.52 37.59 3770 3770 MS2 30/48 Linfeng_122411_rIgG_2.raw High AQIDPVLLK Unambiguous 3 1 IPI00479823.3 CID 1.0000 0.0000 1 1 113 2.13 0.00 0 9 25 2 498.80893 996.61058 1.73 29.43 2726 2726 MS2 13/16 Linfeng_122411_rIgG_2.raw IPI00383565.5 Isoform 2 of Bromodomain adjacent to zinc finger domain protein 1A 3.48 2 4 4 4 12.05 3.48 4 4 1524 175.3 6.81 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High DFIEDYVDILR Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 326 3.36 0.00 0 25 25 2 699.35291 1397.69853 2.68 47.65 5048 5048 MS2 17/20 Linfeng_122411_rIgG_2.raw High LGLHVTPSNVDQVSTPPAAK Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 381 3.17 0.00 0 27 25 3 677.70190 2031.09116 2.04 26.39 2321 2321 MS2 28/76 Linfeng_122411_rIgG_2.raw High SLDLDScTLSEILR Unambiguous 2 1 IPI00383565.5 C7(Carbamidomethyl) CID 1.0000 0.0000 1 1 366 3.04 0.00 0 9 25 2 811.41119 1621.81511 3.01 42.70 4416 4416 MS2 21/26 Linfeng_122411_rIgG_2.raw High LLTLVSTR Unambiguous 2 1 IPI00383565.5 CID 1.0000 0.0000 1 1 91 2.48 0.00 0 28 25 2 451.78751 902.56774 0.84 28.31 2578 2578 MS2 12/14 Linfeng_122411_rIgG_2.raw IPI00465022.9 Isoform 2 of Structural maintenance of chromosomes flexible hinge domain-containing protein 1 3.44 3 5 5 6 0.00 16.71 3.44 5 6 1917 215.6 7.01 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High AcVcQTLGISPEEK Unambiguous 2 1 IPI00465022.9 C2(Carbamidomethyl); C4(Carbamidomethyl) CID 1.0000 0.0000 1 1 209 3.17 0.00 0 22 25 2 796.37787 1591.74846 1.84 26.35 2315 2315 MS2 19/26 Linfeng_122411_rIgG_2.raw High GSNEEDTDTPLFIGK Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 177 3.15 0.00 0 4 25 2 811.88251 1622.75774 1.99 31.12 2949 2949 MS2 20/28 Linfeng_122411_rIgG_2.raw High FSFGLLDLPFR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 362 3.02 0.00 0 21 25 2 656.36047 1311.71367 3.06 49.46 5275 5275 MS2 17/20 Linfeng_122411_rIgG_2.raw High SLFEASQQLLNEMK Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 359 2.94 0.00 0 41 25 2 819.41614 1637.82500 2.80 43.63 4532 4532 MS2 19/26 Linfeng_122411_rIgG_2.raw High DSTEYFIVFEPR Unambiguous 3 1 IPI00465022.9 CID 1.0000 0.0000 1 1 235 2.39 0.00 0 30 25 2 751.86420 1502.72112 3.24 42.31 4367 4367 MS2 16/22 Linfeng_122411_rIgG_2.raw High FSFGLLDLPFR Unambiguous 2 1 IPI00465022.9 CID 1.0000 0.0000 1 1 334 2.04 0.00 0 45 25 2 656.36047 1311.71367 3.06 49.40 5267 5267 MS2 15/20 Linfeng_122411_rIgG_3.raw IPI00023109.2 Isoform 2 of Chromodomain-helicase-DNA-binding protein 2 3.39 2 1 5 8 20.53 3.39 5 8 1739 200.4 7.84 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High ELEEIYmLPR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 588 3.07 0.00 0 3 100 2 654.83118 1308.65508 3.52 41.03 4430 4430 MS2 15/18 Linfeng_20120130_CHD1_2.raw High mVLDHLVIQR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M1(Oxidation) CID 1.0000 0.0000 1 1 346 2.91 0.00 0 32 100 2 620.35040 1239.69353 4.57 36.41 3434 3434 MS2 14/18 Linfeng_20120130_CHD1_2.raw High LLITGTPLQNSLK Unambiguous 4 2 IPI00954192.1;IPI00023109.2 CID 1.0000 0.0000 1 1 131 2.79 0.00 0 8 100 2 699.42444 1397.84160 3.79 44.81 5342 5342 MS2 16/24 Linfeng_20120130_CHD1_2.raw High mVLDHLVIQR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M1(Oxidation) CID 1.0000 0.0000 1 1 368 2.79 0.00 0 10 100 2 620.34991 1239.69255 3.78 36.30 3410 3410 MS2 16/18 Linfeng_20120130_CHD1_2.raw High ELEEIYmLPR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 594 2.67 0.00 0 30 100 2 654.83136 1308.65544 3.80 40.73 4359 4359 MS2 13/18 Linfeng_20120130_CHD1_2.raw High VLIFSQmVR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 352 2.27 0.00 0 54 100 2 554.81519 1108.62309 4.25 39.04 3992 3992 MS2 12/16 Linfeng_20120130_CHD1_2.raw High FNIKEEASSGSESGSPK Unambiguous 2 1 IPI00023109.2 CID 1.0000 0.0000 1 1 369 2.03 0.00 1 16 100 2 877.42340 1753.83953 8.86 38.18 3223 3223 MS2 11/32 Linfeng_20120130_CHD1_7.raw High VLIFSQmVR Unambiguous 4 2 IPI00954192.1;IPI00023109.2 M7(Oxidation) CID 1.0000 0.0000 1 1 350 2.01 0.00 0 54 100 2 554.81519 1108.62309 4.25 38.11 3799 3799 MS2 10/16 Linfeng_20120130_CHD1_2.raw IPI00297572.5 Intron-binding protein aquarius 3.16 1 3 3 3 0.00 9.08 3.16 3 3 1486 171.3 6.37 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High TDVAVQIISNIYHNFPEQR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 409 4.01 0.00 0 11 25 3 748.72009 2244.14573 2.18 46.27 4872 4872 MS2 35/72 Linfeng_122411_rIgG_2.raw High LNLQFLTLHDYLLR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 194 2.58 0.00 0 39 25 3 587.00330 1758.99533 2.94 43.47 4513 4513 MS2 24/52 Linfeng_122411_rIgG_2.raw Medium NTIQFTHTQIEAIR Unambiguous 1 1 IPI00297572.5 CID 1.0000 0.0000 1 1 446 2.49 0.00 0 21 25 3 557.96558 1671.88218 0.49 28.76 2638 2638 MS2 21/52 Linfeng_122411_rIgG_2.raw IPI00783781.2 Nuclear pore complex protein Nup205 3.03 1 3 3 3 9.12 3.03 3 3 2012 227.8 6.19 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High cQDVSAGSLQELALLTGIISK Unambiguous 1 1 IPI00783781.2 C1(Carbamidomethyl) CID 1.0000 0.0000 1 1 321 3.92 0.00 0 13 25 3 735.06293 2203.17423 4.66 49.34 5260 5260 MS2 32/80 Linfeng_122411_rIgG_2.raw Medium SGLAIVSQHDLDQLQADAINAFGESLQKK Unambiguous 1 1 IPI00783781.2 CID 1.0000 0.0000 1 1 225 2.79 0.00 1 24 25 4 774.90710 3096.60659 3.37 46.13 4854 4854 MS2 37/168 Linfeng_122411_rIgG_2.raw High VLVDSLVEDDR Unambiguous 1 1 IPI00783781.2 CID 1.0000 0.0000 1 1 449 2.42 0.00 0 17 25 2 630.32892 1259.65056 2.16 31.25 2965 2965 MS2 16/20 Linfeng_122411_rIgG_2.raw IPI00786995.1 "similar to protein kinase, DNA-activated, catalytic polypeptide" 2.93 3 9 9 12 10.13 1.27 4 4 21.02 2.22 7 8 4096 465.2 7.23 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High NLDLAVLELMQSSVDNTK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 396 3.92 0.00 0 18 25 3 664.01208 1990.02170 2.75 47.62 5043 5043 MS2 34/68 Linfeng_122411_rIgG_2.raw High ATQQQHDFTLTQTADGR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 204 3.06 0.00 0 7 25 3 639.97125 1917.89920 -3.03 24.35 2397 2397 MS2 28/64 Linfeng_091311_rIgG_1.raw High NLLIFENLIDLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 163 2.84 0.00 0 37 25 2 722.92633 1444.84538 2.99 49.03 5221 5221 MS2 18/22 Linfeng_122411_rIgG_2.raw High TVGALQVLGTEAQSSLLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 183 2.74 0.00 0 6 25 2 908.01703 1815.02678 2.47 40.57 4147 4147 MS2 17/34 Linfeng_122411_rIgG_2.raw High NLLIFENLIDLK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 164 2.49 0.00 0 62 25 2 722.92444 1444.84160 0.37 50.03 5816 5816 MS2 18/22 Linfeng_091311_rIgG_1.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 513 2.41 0.00 0 48 25 2 588.31445 1175.62163 -4.31 27.58 2833 2833 MS2 18/20 Linfeng_091311_rIgG_1.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 526 2.39 0.00 0 58 25 2 588.31714 1175.62700 0.25 19.37 1533 1533 MS2 16/20 Linfeng_122411_rIgG_2.raw High LLALNSLYSPK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 234 2.34 0.00 0 24 25 2 609.85870 1218.71013 0.69 35.31 3482 3482 MS2 16/20 Linfeng_122411_rIgG_2.raw High VTELALTASDR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 543 2.28 0.00 0 49 25 2 588.31702 1175.62676 0.05 18.26 1438 1438 MS2 14/20 Linfeng_122411_rIgG_2.raw High NELEIPGQYDGR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 251 2.27 0.00 0 28 25 2 695.83508 1390.66289 2.23 29.13 2657 2657 MS2 14/22 Linfeng_122411_rIgG_3.raw High DFGLLVFVR Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 290 2.24 0.00 0 47 25 2 533.30933 1065.61138 2.04 46.70 4926 4926 MS2 15/16 Linfeng_122411_rIgG_2.raw High QLFSSLFSGILK Unambiguous 3 1 IPI00786995.1 CID 1.0000 0.0000 1 1 262 2.17 0.00 0 26 25 2 670.38409 1339.76091 -0.87 47.93 5793 5793 MS2 14/22 Linfeng_091311_rIgG_2.raw IPI00297241.4 Nucleolar pre-ribosomal-associated protein 1 2.77 1 4 4 4 11.94 2.77 4 4 2271 254.2 6.47 A2 B2 C2 Sequence PSM Ambiguity # Proteins # Protein Groups Protein Group Accessions Modifications Activation Type ?Score ?Cn Rank Search Engine Rank Peptides Matched XCorr Probability # Missed Cleavages Isolation Interference [%] Ion Inject Time [ms] Charge m/z [Da] MH+ [Da] ?M [ppm] RT [min] First Scan Last Scan MS Order Ions Matched Spectrum File High FQEQSQLLYLLDVVR Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 287 3.42 0.00 0 30 25 3 617.67358 1851.00620 2.73 47.61 5042 5042 MS2 25/56 Linfeng_122411_rIgG_2.raw High DPVLAPAVGADLLDYcLAR Unambiguous 1 1 IPI00297241.4 C16(Carbamidomethyl) CID 1.0000 0.0000 1 1 388 3.14 0.00 0 24 25 3 677.02100 2029.04844 2.98 45.53 4778 4778 MS2 31/72 Linfeng_122411_rIgG_2.raw High TAADDDLVADLVVNILK Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 352 2.92 0.00 0 31 25 3 595.66162 1784.97031 3.47 55.42 5966 5966 MS2 28/64 Linfeng_122411_rIgG_2.raw High ISTINILLSTLK Unambiguous 1 1 IPI00297241.4 CID 1.0000 0.0000 1 1 31 2.45 0.00 0 41 25 2 658.41553 1315.82378 3.19 44.96 4705 4705 MS2 19/22 Linfeng_122411_rIgG_2.raw