ENCODE4 v1.8.0 GRCh38

{
    "documents": [
        "/documents/b33347a7-dd05-4452-80db-9c7a0090c4fb/"
    ],
    "date_created": "2021-09-17T19:58:23.235642+00:00",
    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
    "lab": "/labs/encode-processing-pipeline/",
    "award": "/awards/U24HG009397/",
    "aliases": [
        "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e"
    ],
    "accession": "ENCAN316CWM",
    "schema_version": "1",
    "files": [
        {
            "accession": "ENCFF144GGG",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-align-shard-0-glob-3bcbe4e7489c90f75e0523ac6f3a9385-ENCFF783HVV.merged.crop_76-2bp.srt.bam"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:13.032056+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bam",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-align/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783HVV.merged.crop_76-2bp.srt.bam",
            "md5sum": "29e60a630027a07c14d9c2eed135b7ed",
            "content_md5sum": "9afa514970c389db5ffb56457285ec8b",
            "fastq_signature": [],
            "file_size": 4041363185,
            "cropped_read_length": 76,
            "cropped_read_length_tolerance": 2,
            "mapped_read_length": 76,
            "mapped_run_type": "single-ended",
            "flowcell_details": [],
            "output_type": "unfiltered alignments",
            "derived_from": [
                "/files/ENCFF926DGL/",
                "/files/ENCFF871OPU/",
                "/files/ENCFF381YLD/",
                "/files/ENCFF914VWV/",
                "/files/ENCFF110MCL/",
                "/files/ENCFF765WGZ/",
                "/files/ENCFF332GSA/",
                "/files/ENCFF111PCX/",
                "/files/ENCFF783HVV/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
            "@id": "/files/ENCFF144GGG/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "b98e3a37-0baf-4e7f-ae47-1b137692146f",
            "title": "ENCFF144GGG",
            "href": "/files/ENCFF144GGG/@@download/ENCFF144GGG.bam",
            "read_length_units": "nt",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/chip-seq-alignment-step-v-2-0/",
            "output_category": "alignment",
            "quality_metrics": [
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:21.947669+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "1",
                    "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                    "quality_metric_of": [
                        "/files/ENCFF144GGG/"
                    ],
                    "processing_stage": "unfiltered",
                    "total_reads": 78189756,
                    "total_reads_qc_failed": 0,
                    "duplicate_reads": 0,
                    "duplicate_reads_qc_failed": 0,
                    "mapped_reads": 77051975,
                    "mapped_reads_qc_failed": 0,
                    "pct_mapped_reads": 98.5,
                    "paired_reads": 0,
                    "paired_reads_qc_failed": 0,
                    "read1": 0,
                    "read1_qc_failed": 0,
                    "read2": 0,
                    "read2_qc_failed": 0,
                    "properly_paired_reads": 0,
                    "properly_paired_reads_qc_failed": 0,
                    "pct_properly_paired_reads": 0,
                    "with_itself": 0,
                    "with_itself_qc_failed": 0,
                    "singletons": 0,
                    "singletons_qc_failed": 0,
                    "pct_singletons": 0,
                    "diff_chroms": 0,
                    "diff_chroms_qc_failed": 0,
                    "@id": "/chip-alignment-quality-metrics/9dd9b892-0a71-4fa2-bf93-8629e13969fa/",
                    "@type": [
                        "ChipAlignmentQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "9dd9b892-0a71-4fa2-bf93-8629e13969fa",
                    "assay_term_id": "OBI:0000716"
                }
            ],
            "file_type": "bam",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/b98e3a37-0baf-4e7f-ae47-1b137692146f/ENCFF144GGG.bam",
                "md5sum_base64": "KeYKYwAnoHwU2cLu0TW37Q==",
                "file_size": 4041363185
            },
            "s3_uri": "s3://encode-public/2021/09/17/b98e3a37-0baf-4e7f-ae47-1b137692146f/ENCFF144GGG.bam",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/b98e3a37-0baf-4e7f-ae47-1b137692146f/ENCFF144GGG.bam?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        },
        {
            "accession": "ENCFF384REK",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-filter-shard-0-glob-3bcbe4e7489c90f75e0523ac6f3a9385-ENCFF783HVV.merged.crop_76-2bp.srt.nodup.bam"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:14.988707+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bam",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-filter/shard-0/glob-3bcbe4e7489c90f75e0523ac6f3a9385/ENCFF783HVV.merged.crop_76-2bp.srt.nodup.bam",
            "md5sum": "af8e0631ac140f4cc7ae02d17e3494a0",
            "content_md5sum": "f553289eefacdde8cc95be90cb406cca",
            "fastq_signature": [],
            "file_size": 3274138276,
            "cropped_read_length": 76,
            "cropped_read_length_tolerance": 2,
            "mapped_read_length": 76,
            "mapped_run_type": "single-ended",
            "flowcell_details": [],
            "output_type": "alignments",
            "derived_from": [
                "/files/ENCFF926DGL/",
                "/files/ENCFF871OPU/",
                "/files/ENCFF381YLD/",
                "/files/ENCFF914VWV/",
                "/files/ENCFF110MCL/",
                "/files/ENCFF765WGZ/",
                "/files/ENCFF332GSA/",
                "/files/ENCFF111PCX/",
                "/files/ENCFF783HVV/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
            "@id": "/files/ENCFF384REK/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "509123c2-c1f0-45bd-98d1-a7a1e26ce824",
            "title": "ENCFF384REK",
            "href": "/files/ENCFF384REK/@@download/ENCFF384REK.bam",
            "read_length_units": "nt",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/chip-seq-alignment-step-v-2-0/",
            "output_category": "alignment",
            "quality_metrics": [
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:22.037147+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "1",
                    "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                    "quality_metric_of": [
                        "/files/ENCFF384REK/"
                    ],
                    "processing_stage": "filtered",
                    "total_reads": 62016908,
                    "total_reads_qc_failed": 0,
                    "duplicate_reads": 0,
                    "duplicate_reads_qc_failed": 0,
                    "mapped_reads": 62016908,
                    "mapped_reads_qc_failed": 0,
                    "pct_mapped_reads": 100,
                    "paired_reads": 0,
                    "paired_reads_qc_failed": 0,
                    "read1": 0,
                    "read1_qc_failed": 0,
                    "read2": 0,
                    "read2_qc_failed": 0,
                    "properly_paired_reads": 0,
                    "properly_paired_reads_qc_failed": 0,
                    "pct_properly_paired_reads": 0,
                    "with_itself": 0,
                    "with_itself_qc_failed": 0,
                    "singletons": 0,
                    "singletons_qc_failed": 0,
                    "pct_singletons": 0,
                    "diff_chroms": 0,
                    "diff_chroms_qc_failed": 0,
                    "@id": "/chip-alignment-quality-metrics/c8e72345-c962-4632-be48-28e3eb6ea5ac/",
                    "@type": [
                        "ChipAlignmentQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "c8e72345-c962-4632-be48-28e3eb6ea5ac",
                    "assay_term_id": "OBI:0000716",
                    "usable_fragments": 62016908
                },
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:22.194732+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "1",
                    "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                    "quality_metric_of": [
                        "/files/ENCFF384REK/"
                    ],
                    "subsampled_reads": 15000000,
                    "estimated_fragment_len": 205,
                    "corr_estimated_fragment_len": 0.175032526649119,
                    "phantom_peak": 50,
                    "corr_phantom_peak": 0.1757415,
                    "argmin_corr": 1500,
                    "min_corr": 0.1730759,
                    "NSC": 1.011305,
                    "RSC": 0.7340231,
                    "cross_correlation_plot": {
                        "download": "ENCFF783HVV.merged.trim_50bp.srt.filt.no_chrM.15M.cc.plot.pdf",
                        "href": "@@download/cross_correlation_plot/ENCFF783HVV.merged.trim_50bp.srt.filt.no_chrM.15M.cc.plot.pdf",
                        "type": "application/pdf",
                        "md5sum": "2fb388c272d6f60309377af24ee2fc53"
                    },
                    "auc": 0.2759257654696832,
                    "syn_auc": 0.49486746604360016,
                    "x_intercept": 0.0979312909488231,
                    "syn_x_intercept": 0,
                    "elbow_pt": 0.6159442746122795,
                    "syn_elbow_pt": 0.49597740710216875,
                    "jsd": 0.16552777583565545,
                    "syn_jsd": 0.28771782335544444,
                    "pct_genome_enrich": 31.5368666865267,
                    "diff_enrich": 27.273761350053285,
                    "ch_div": 0.23318857000995252,
                    "jsd_plot": {
                        "download": "ENCFF783HVV.merged.crop_76-2bp.srt.nodup.jsd_plot.png",
                        "href": "@@download/jsd_plot/ENCFF783HVV.merged.crop_76-2bp.srt.nodup.jsd_plot.png",
                        "type": "image/png",
                        "md5sum": "840dcb5af495228f2ad124f15f7585a8",
                        "width": 640,
                        "height": 480
                    },
                    "gc_bias_plot": {
                        "download": "ENCFF783HVV.merged.crop_76-2bp.srt.nodup.gc_plot.png",
                        "href": "@@download/gc_bias_plot/ENCFF783HVV.merged.crop_76-2bp.srt.nodup.gc_plot.png",
                        "type": "image/png",
                        "md5sum": "3d60746bcd7d558b782f05d8d6f4c4c5",
                        "width": 640,
                        "height": 480
                    },
                    "@id": "/chip-alignment-enrichment-quality-metrics/8bc54846-513e-4890-b65c-6a19dcc1980b/",
                    "@type": [
                        "ChipAlignmentEnrichmentQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "8bc54846-513e-4890-b65c-6a19dcc1980b",
                    "assay_term_id": "OBI:0000716"
                },
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:22.567352+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "1",
                    "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                    "quality_metric_of": [
                        "/files/ENCFF384REK/"
                    ],
                    "unpaired_reads": 67765428,
                    "paired_reads": 0,
                    "unmapped_reads": 0,
                    "unpaired_duplicate_reads": 5748520,
                    "paired_duplicate_reads": 0,
                    "paired_optical_duplicate_reads": 0,
                    "pct_duplicate_reads": 8.483,
                    "total_fragments": 67674321,
                    "distinct_fragments": 62018649,
                    "positions_with_one_read": 4822348,
                    "NRF": 0.916428,
                    "PBC1": 0.915895,
                    "PBC2": 11.779024,
                    "@id": "/chip-library-quality-metrics/e7e7f432-6e31-495c-9bc9-86a327eb4c86/",
                    "@type": [
                        "ChipLibraryQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "e7e7f432-6e31-495c-9bc9-86a327eb4c86",
                    "assay_term_id": "OBI:0000716"
                }
            ],
            "file_type": "bam",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/509123c2-c1f0-45bd-98d1-a7a1e26ce824/ENCFF384REK.bam",
                "md5sum_base64": "r44GMawUD0zHrgLRfjSUoA==",
                "file_size": 3274138276
            },
            "s3_uri": "s3://encode-public/2021/09/17/509123c2-c1f0-45bd-98d1-a7a1e26ce824/ENCFF384REK.bam",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/509123c2-c1f0-45bd-98d1-a7a1e26ce824/ENCFF384REK.bam?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        },
        {
            "accession": "ENCFF598QJH",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-macs2_signal_track-shard-0-glob-7ab0340dfeb10ca109917cbdcc568548-ENCFF783HVV.merged.crop_76-2bp.srt.nodup_x_ENCFF045AJB.merged.crop_76-2bp.srt.nodup.pval.signal.bigwig"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:17.469743+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bigWig",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/ENCFF783HVV.merged.crop_76-2bp.srt.nodup_x_ENCFF045AJB.merged.crop_76-2bp.srt.nodup.pval.signal.bigwig",
            "md5sum": "27fa38c727b6377a4fa20812627be932",
            "fastq_signature": [],
            "file_size": 1140428441,
            "flowcell_details": [],
            "output_type": "signal p-value",
            "derived_from": [
                "/files/ENCFF384REK/",
                "/files/ENCFF959PUV/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/b4dbc4b0-c9ca-4523-b4c4-725ea9ed1e08/",
            "preferred_default": true,
            "@id": "/files/ENCFF598QJH/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "1eccb5ad-17cf-4a6c-84b3-a475a36f14c0",
            "title": "ENCFF598QJH",
            "href": "/files/ENCFF598QJH/@@download/ENCFF598QJH.bigWig",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/histone-chip-signal-generation-step-v-1-0/",
            "output_category": "signal",
            "quality_metrics": [],
            "file_type": "bigWig",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/1eccb5ad-17cf-4a6c-84b3-a475a36f14c0/ENCFF598QJH.bigWig",
                "md5sum_base64": "J/o4xye2N3pPoggSYnvpMg==",
                "file_size": 1140428441
            },
            "s3_uri": "s3://encode-public/2021/09/17/1eccb5ad-17cf-4a6c-84b3-a475a36f14c0/ENCFF598QJH.bigWig",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/1eccb5ad-17cf-4a6c-84b3-a475a36f14c0/ENCFF598QJH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        },
        {
            "accession": "ENCFF355UFV",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-macs2_signal_track-shard-0-glob-8876d8ced974dc46a0c7a4fac20a3a95-ENCFF783HVV.merged.crop_76-2bp.srt.nodup_x_ENCFF045AJB.merged.crop_76-2bp.srt.nodup.fc.signal.bigwig"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:18.037630+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bigWig",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/ENCFF783HVV.merged.crop_76-2bp.srt.nodup_x_ENCFF045AJB.merged.crop_76-2bp.srt.nodup.fc.signal.bigwig",
            "md5sum": "a7cea92381d19793e5401b0eec585248",
            "fastq_signature": [],
            "file_size": 1456498237,
            "flowcell_details": [],
            "output_type": "fold change over control",
            "derived_from": [
                "/files/ENCFF384REK/",
                "/files/ENCFF959PUV/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/b4dbc4b0-c9ca-4523-b4c4-725ea9ed1e08/",
            "@id": "/files/ENCFF355UFV/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "009d2ab5-a57e-472c-99d0-ea4686512108",
            "title": "ENCFF355UFV",
            "href": "/files/ENCFF355UFV/@@download/ENCFF355UFV.bigWig",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/histone-chip-signal-generation-step-v-1-0/",
            "output_category": "signal",
            "quality_metrics": [],
            "file_type": "bigWig",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/009d2ab5-a57e-472c-99d0-ea4686512108/ENCFF355UFV.bigWig",
                "md5sum_base64": "p86pI4HRl5PlQBsO7FhSSA==",
                "file_size": 1456498237
            },
            "s3_uri": "s3://encode-public/2021/09/17/009d2ab5-a57e-472c-99d0-ea4686512108/ENCFF355UFV.bigWig",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/009d2ab5-a57e-472c-99d0-ea4686512108/ENCFF355UFV.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        },
        {
            "accession": "ENCFF927GDX",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-overlap_pr-shard-0-glob-2e6c87fc90e45fa5dbda88934d454cd3-rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:19.756468+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bed",
            "file_format_type": "narrowPeak",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-overlap_pr/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.gz",
            "md5sum": "560cbb31dae0131af0f2c275210c9f7d",
            "content_md5sum": "ebc561fca0b6766850a6cc03303fadef",
            "fastq_signature": [],
            "file_size": 1277061,
            "flowcell_details": [],
            "output_type": "pseudoreplicated peaks",
            "derived_from": [
                "/files/ENCFF384REK/",
                "/files/ENCFF959PUV/",
                "/files/ENCFF356LFX/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/d4ae0d22-a828-4c86-9ef0-c788165e1393/",
            "preferred_default": true,
            "@id": "/files/ENCFF927GDX/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "ec7b1682-0db7-4d60-a7ab-af241f9e5a0d",
            "title": "ENCFF927GDX",
            "href": "/files/ENCFF927GDX/@@download/ENCFF927GDX.bed.gz",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/histone-chip-seq-pseudoreplicated-overlap-step-v-1-0/",
            "output_category": "annotation",
            "quality_metrics": [
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:22.749736+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "2",
                    "step_run": "/analysis-step-runs/d4ae0d22-a828-4c86-9ef0-c788165e1393/",
                    "quality_metric_of": [
                        "/files/ENCFF927GDX/"
                    ],
                    "frip": 0.14020400694597673,
                    "min_size": 205,
                    "25_pct": 539,
                    "50_pct": 820,
                    "75_pct": 1407,
                    "max_size": 86385,
                    "mean": 1373.6225479286554,
                    "@id": "/chip-peak-enrichment-quality-metrics/d98ed24d-03b5-457e-bbbc-11a766d1dad7/",
                    "@type": [
                        "ChipPeakEnrichmentQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "d98ed24d-03b5-457e-bbbc-11a766d1dad7",
                    "assay_term_id": "OBI:0000716"
                },
                {
                    "assay_term_name": "ChIP-seq",
                    "status": "released",
                    "lab": "/labs/encode-processing-pipeline/",
                    "award": "/awards/U24HG009397/",
                    "aliases": [],
                    "date_created": "2021-09-17T19:58:22.655968+00:00",
                    "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                    "schema_version": "2",
                    "step_run": "/analysis-step-runs/d4ae0d22-a828-4c86-9ef0-c788165e1393/",
                    "quality_metric_of": [
                        "/files/ENCFF927GDX/"
                    ],
                    "reproducible_peaks": 62906,
                    "rescue_ratio": 0,
                    "self_consistency_ratio": 1,
                    "reproducibility": "pass",
                    "@id": "/chip-replication-quality-metrics/18c491ac-ec55-40de-86da-956047b0b5fa/",
                    "@type": [
                        "ChipReplicationQualityMetric",
                        "QualityMetric",
                        "Item"
                    ],
                    "uuid": "18c491ac-ec55-40de-86da-956047b0b5fa",
                    "assay_term_id": "OBI:0000716"
                }
            ],
            "file_type": "bed narrowPeak",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/ec7b1682-0db7-4d60-a7ab-af241f9e5a0d/ENCFF927GDX.bed.gz",
                "md5sum_base64": "Vgy7MdrgExrw8sJ1IQyffQ==",
                "file_size": 1277061
            },
            "s3_uri": "s3://encode-public/2021/09/17/ec7b1682-0db7-4d60-a7ab-af241f9e5a0d/ENCFF927GDX.bed.gz",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/ec7b1682-0db7-4d60-a7ab-af241f9e5a0d/ENCFF927GDX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        },
        {
            "accession": "ENCFF445WXG",
            "aliases": [
                "encode-processing-pipeline:088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-encode-processing-caper_out_v04_05-chip-088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e-call-overlap_pr-shard-0-glob-155eada107f68a2195912a39f5dee4bc-rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb"
            ],
            "schema_version": "31",
            "lab": "/labs/encode-processing-pipeline/",
            "award": "/awards/U24HG009397/",
            "date_created": "2021-09-17T19:58:21.347111+00:00",
            "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
            "alternate_accessions": [],
            "file_format": "bigBed",
            "file_format_type": "narrowPeak",
            "no_file_available": false,
            "submitted_file_name": "gs://encode-processing/caper_out_v04_05/chip/088ce34e-2b98-46f8-91a8-a6d5ef6d9f2e/call-overlap_pr/shard-0/glob-155eada107f68a2195912a39f5dee4bc/rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb",
            "md5sum": "3c5442b7e7da86013e09387fc39545a7",
            "fastq_signature": [],
            "file_size": 2630214,
            "flowcell_details": [],
            "output_type": "pseudoreplicated peaks",
            "derived_from": [
                "/files/ENCFF927GDX/"
            ],
            "dataset": "/experiments/ENCSR707VZS/",
            "assembly": "GRCh38",
            "status": "released",
            "dbxrefs": [],
            "step_run": "/analysis-step-runs/3e281b52-dcc3-4ce4-9d92-4c61c259bada/",
            "preferred_default": true,
            "@id": "/files/ENCFF445WXG/",
            "@type": [
                "File",
                "Item"
            ],
            "uuid": "09f04882-ff9d-4185-95fe-fb02ef1a0206",
            "title": "ENCFF445WXG",
            "href": "/files/ENCFF445WXG/@@download/ENCFF445WXG.bigBed",
            "biological_replicates": [
                1
            ],
            "technical_replicates": [
                "1_1",
                "1_2"
            ],
            "biological_replicates_formatted": "Rep 1",
            "donors": [
                "/human-donors/ENCDO907YUG/"
            ],
            "analysis_step_version": "/analysis-step-versions/histone-chip-seq-pseudoreplicated-overlap-stable-peaks-file-format-conversion-step-v-1-0/",
            "output_category": "annotation",
            "quality_metrics": [],
            "file_type": "bigBed narrowPeak",
            "superseded_by": [],
            "cloud_metadata": {
                "url": "https://encode-public.s3.amazonaws.com/2021/09/17/09f04882-ff9d-4185-95fe-fb02ef1a0206/ENCFF445WXG.bigBed",
                "md5sum_base64": "PFRCt+fahgE+CTh/w5VFpw==",
                "file_size": 2630214
            },
            "s3_uri": "s3://encode-public/2021/09/17/09f04882-ff9d-4185-95fe-fb02ef1a0206/ENCFF445WXG.bigBed",
            "azure_uri": "https://datasetencode.blob.core.windows.net/dataset/2021/09/17/09f04882-ff9d-4185-95fe-fb02ef1a0206/ENCFF445WXG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D",
            "assay_title": "Histone ChIP-seq",
            "assay_term_name": "ChIP-seq",
            "biosample_ontology": "/biosample-types/tissue_UBERON_0002080/",
            "simple_biosample_summary": "female adult (56 years)",
            "target": "/targets/H3K27me3-human/",
            "analyses": [
                "/analyses/ENCAN316CWM/"
            ],
            "processed": true
        }
    ],
    "pipeline_version": "1.8.0",
    "status": "released",
    "quality_standard": "/quality-standards/encode4-histone-chip/",
    "@id": "/analyses/ENCAN316CWM/",
    "@type": [
        "Analysis",
        "Item"
    ],
    "uuid": "6b039089-b5ae-42a7-94c7-9942039cd922",
    "datasets": [
        "/experiments/ENCSR707VZS/"
    ],
    "assembly": "GRCh38",
    "pipelines": [
        "/pipelines/ENCPL367MAS/",
        "/pipelines/ENCPL481MLO/",
        "/pipelines/ENCPL612HIG/",
        "/pipelines/ENCPL809GEM/"
    ],
    "pipeline_award_rfas": [
        "ENCODE4"
    ],
    "pipeline_labs": [
        {
            "fax": "",
            "institute_label": "",
            "address1": "",
            "state": "",
            "institute_name": "",
            "awards": [
                "/awards/U41HG007000/",
                "/awards/U41HG006992/"
            ],
            "title": "ENCODE Processing Pipeline",
            "phone1": "",
            "phone2": "",
            "schema_version": "5",
            "pi": "/users/8b1f8780-b5d6-4fb7-a5a2-ddcec9054288/",
            "postal_code": "",
            "name": "encode-processing-pipeline",
            "city": "",
            "country": "USA",
            "status": "current",
            "@id": "/labs/encode-processing-pipeline/",
            "@type": [
                "Lab",
                "Item"
            ],
            "uuid": "a558111b-4c50-4b2e-9de8-73fd8fd3a67d"
        }
    ],
    "superseded_by": [],
    "quality_metrics": [
        {
            "files": [
                "/files/ENCFF144GGG/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:21.947669+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "1",
                "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                "quality_metric_of": [
                    "/files/ENCFF144GGG/"
                ],
                "processing_stage": "unfiltered",
                "total_reads": 78189756,
                "total_reads_qc_failed": 0,
                "duplicate_reads": 0,
                "duplicate_reads_qc_failed": 0,
                "mapped_reads": 77051975,
                "mapped_reads_qc_failed": 0,
                "pct_mapped_reads": 98.5,
                "paired_reads": 0,
                "paired_reads_qc_failed": 0,
                "read1": 0,
                "read1_qc_failed": 0,
                "read2": 0,
                "read2_qc_failed": 0,
                "properly_paired_reads": 0,
                "properly_paired_reads_qc_failed": 0,
                "pct_properly_paired_reads": 0,
                "with_itself": 0,
                "with_itself_qc_failed": 0,
                "singletons": 0,
                "singletons_qc_failed": 0,
                "pct_singletons": 0,
                "diff_chroms": 0,
                "diff_chroms_qc_failed": 0,
                "@id": "/chip-alignment-quality-metrics/9dd9b892-0a71-4fa2-bf93-8629e13969fa/",
                "@type": [
                    "ChipAlignmentQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "9dd9b892-0a71-4fa2-bf93-8629e13969fa",
                "assay_term_id": "OBI:0000716"
            }
        },
        {
            "files": [
                "/files/ENCFF384REK/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:22.037147+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "1",
                "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                "quality_metric_of": [
                    "/files/ENCFF384REK/"
                ],
                "processing_stage": "filtered",
                "total_reads": 62016908,
                "total_reads_qc_failed": 0,
                "duplicate_reads": 0,
                "duplicate_reads_qc_failed": 0,
                "mapped_reads": 62016908,
                "mapped_reads_qc_failed": 0,
                "pct_mapped_reads": 100,
                "paired_reads": 0,
                "paired_reads_qc_failed": 0,
                "read1": 0,
                "read1_qc_failed": 0,
                "read2": 0,
                "read2_qc_failed": 0,
                "properly_paired_reads": 0,
                "properly_paired_reads_qc_failed": 0,
                "pct_properly_paired_reads": 0,
                "with_itself": 0,
                "with_itself_qc_failed": 0,
                "singletons": 0,
                "singletons_qc_failed": 0,
                "pct_singletons": 0,
                "diff_chroms": 0,
                "diff_chroms_qc_failed": 0,
                "@id": "/chip-alignment-quality-metrics/c8e72345-c962-4632-be48-28e3eb6ea5ac/",
                "@type": [
                    "ChipAlignmentQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "c8e72345-c962-4632-be48-28e3eb6ea5ac",
                "assay_term_id": "OBI:0000716",
                "usable_fragments": 62016908
            }
        },
        {
            "files": [
                "/files/ENCFF384REK/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:22.194732+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "1",
                "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                "quality_metric_of": [
                    "/files/ENCFF384REK/"
                ],
                "subsampled_reads": 15000000,
                "estimated_fragment_len": 205,
                "corr_estimated_fragment_len": 0.175032526649119,
                "phantom_peak": 50,
                "corr_phantom_peak": 0.1757415,
                "argmin_corr": 1500,
                "min_corr": 0.1730759,
                "NSC": 1.011305,
                "RSC": 0.7340231,
                "cross_correlation_plot": {
                    "download": "ENCFF783HVV.merged.trim_50bp.srt.filt.no_chrM.15M.cc.plot.pdf",
                    "href": "@@download/cross_correlation_plot/ENCFF783HVV.merged.trim_50bp.srt.filt.no_chrM.15M.cc.plot.pdf",
                    "type": "application/pdf",
                    "md5sum": "2fb388c272d6f60309377af24ee2fc53"
                },
                "auc": 0.2759257654696832,
                "syn_auc": 0.49486746604360016,
                "x_intercept": 0.0979312909488231,
                "syn_x_intercept": 0,
                "elbow_pt": 0.6159442746122795,
                "syn_elbow_pt": 0.49597740710216875,
                "jsd": 0.16552777583565545,
                "syn_jsd": 0.28771782335544444,
                "pct_genome_enrich": 31.5368666865267,
                "diff_enrich": 27.273761350053285,
                "ch_div": 0.23318857000995252,
                "jsd_plot": {
                    "download": "ENCFF783HVV.merged.crop_76-2bp.srt.nodup.jsd_plot.png",
                    "href": "@@download/jsd_plot/ENCFF783HVV.merged.crop_76-2bp.srt.nodup.jsd_plot.png",
                    "type": "image/png",
                    "md5sum": "840dcb5af495228f2ad124f15f7585a8",
                    "width": 640,
                    "height": 480
                },
                "gc_bias_plot": {
                    "download": "ENCFF783HVV.merged.crop_76-2bp.srt.nodup.gc_plot.png",
                    "href": "@@download/gc_bias_plot/ENCFF783HVV.merged.crop_76-2bp.srt.nodup.gc_plot.png",
                    "type": "image/png",
                    "md5sum": "3d60746bcd7d558b782f05d8d6f4c4c5",
                    "width": 640,
                    "height": 480
                },
                "@id": "/chip-alignment-enrichment-quality-metrics/8bc54846-513e-4890-b65c-6a19dcc1980b/",
                "@type": [
                    "ChipAlignmentEnrichmentQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "8bc54846-513e-4890-b65c-6a19dcc1980b",
                "assay_term_id": "OBI:0000716"
            }
        },
        {
            "files": [
                "/files/ENCFF384REK/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:22.567352+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "1",
                "step_run": "/analysis-step-runs/807126b9-40b4-454e-9db4-0df05fdfcab6/",
                "quality_metric_of": [
                    "/files/ENCFF384REK/"
                ],
                "unpaired_reads": 67765428,
                "paired_reads": 0,
                "unmapped_reads": 0,
                "unpaired_duplicate_reads": 5748520,
                "paired_duplicate_reads": 0,
                "paired_optical_duplicate_reads": 0,
                "pct_duplicate_reads": 8.483,
                "total_fragments": 67674321,
                "distinct_fragments": 62018649,
                "positions_with_one_read": 4822348,
                "NRF": 0.916428,
                "PBC1": 0.915895,
                "PBC2": 11.779024,
                "@id": "/chip-library-quality-metrics/e7e7f432-6e31-495c-9bc9-86a327eb4c86/",
                "@type": [
                    "ChipLibraryQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "e7e7f432-6e31-495c-9bc9-86a327eb4c86",
                "assay_term_id": "OBI:0000716"
            }
        },
        {
            "files": [
                "/files/ENCFF927GDX/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:22.749736+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "2",
                "step_run": "/analysis-step-runs/d4ae0d22-a828-4c86-9ef0-c788165e1393/",
                "quality_metric_of": [
                    "/files/ENCFF927GDX/"
                ],
                "frip": 0.14020400694597673,
                "min_size": 205,
                "25_pct": 539,
                "50_pct": 820,
                "75_pct": 1407,
                "max_size": 86385,
                "mean": 1373.6225479286554,
                "@id": "/chip-peak-enrichment-quality-metrics/d98ed24d-03b5-457e-bbbc-11a766d1dad7/",
                "@type": [
                    "ChipPeakEnrichmentQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "d98ed24d-03b5-457e-bbbc-11a766d1dad7",
                "assay_term_id": "OBI:0000716"
            }
        },
        {
            "files": [
                "/files/ENCFF927GDX/"
            ],
            "biological_replicates": [
                1
            ],
            "quality_metric": {
                "assay_term_name": "ChIP-seq",
                "status": "released",
                "lab": "/labs/encode-processing-pipeline/",
                "award": "/awards/U24HG009397/",
                "aliases": [],
                "date_created": "2021-09-17T19:58:22.655968+00:00",
                "submitted_by": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
                "schema_version": "2",
                "step_run": "/analysis-step-runs/d4ae0d22-a828-4c86-9ef0-c788165e1393/",
                "quality_metric_of": [
                    "/files/ENCFF927GDX/"
                ],
                "reproducible_peaks": 62906,
                "rescue_ratio": 0,
                "self_consistency_ratio": 1,
                "reproducibility": "pass",
                "@id": "/chip-replication-quality-metrics/18c491ac-ec55-40de-86da-956047b0b5fa/",
                "@type": [
                    "ChipReplicationQualityMetric",
                    "QualityMetric",
                    "Item"
                ],
                "uuid": "18c491ac-ec55-40de-86da-956047b0b5fa",
                "assay_term_id": "OBI:0000716"
            }
        }
    ],
    "quality_metrics_report": {
        "Read depth": [
            {
                "metric": 62016908,
                "biological_replicates": [
                    1
                ],
                "quality": "pass"
            }
        ],
        "NRF": [
            {
                "metric": 0.916428,
                "biological_replicates": [
                    1
                ],
                "quality": "pass"
            }
        ],
        "NSC": [
            {
                "metric": 1.011305,
                "biological_replicates": [
                    1
                ],
                "quality": "not_compliant"
            }
        ],
        "PBC1": [
            {
                "metric": 0.915895,
                "biological_replicates": [
                    1
                ],
                "quality": "pass"
            }
        ],
        "PBC2": [
            {
                "metric": 11.779024,
                "biological_replicates": [
                    1
                ],
                "quality": "pass"
            }
        ],
        "IDR": [
            {
                "metric": "pass",
                "biological_replicates": [
                    1
                ],
                "quality": "pass"
            }
        ],
        "Rescue ratio": [
            {
                "metric": 0,
                "biological_replicates": [
                    1
                ]
            }
        ],
        "Self-consistency ratio": [
            {
                "metric": 1,
                "biological_replicates": [
                    1
                ]
            }
        ],
        "Peak count": [
            {
                "metric": 62906,
                "biological_replicates": [
                    1
                ]
            }
        ],
        "FRiP": [
            {
                "metric": 0.14020400694597673,
                "biological_replicates": [
                    1
                ]
            }
        ]
    },
    "title": "ENCODE4 v1.8.0 GRCh38",
    "@context": "/terms/",
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released analysis {ENCAN316CWM|/analyses/ENCAN316CWM/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "path": "/analyses/ENCAN316CWM/",
                "name": "audit_item_status"
            }
        ]
    }
}