Summary for ENCSR850UFY
doi:10.17989/ENCSR850UFY
Summary
- Status
- released
- Description
- Reference epigenome for human tibial nerve (54 year old male)
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, DNase-seq, whole-genome shotgun bisulfite sequencing
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens tibial nerve tissue male adult (54 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
- Tags
Experiments in ENCSR850UFY
Experiments
10 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR091KXI | ChIP-seq | H3K27ac | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR464TRM | ChIP-seq | H3K4me3 | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR590NNJ | ChIP-seq | H3K4me1 | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR648OSR | RNA-seq | Homo sapiens tibial nerve tissue male adult (54 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR658MZU | whole-genome shotgun bisulfite sequencing | Homo sapiens tibial nerve tissue male adult (54 years) | Richard Myers, HAIB | released | ||
| ENCSR662ASZ | ChIP-seq | H3K27me3 | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR689VEF | ChIP-seq | CTCF | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR726EEM | ChIP-seq | H3K9me3 | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR925FSB | ChIP-seq | H3K36me3 | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
| ENCSR508FVM | DNase-seq | Homo sapiens tibial nerve tissue male adult (54 years) | John Stamatoyannopoulos, UW | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR152HLZ | input library | Homo sapiens tibial nerve tissue male adult (54 years) | Bradley Bernstein, Broad | released |