Summary for ENCSR284DRW
doi:10.17989/ENCSR284DRW
Summary
- Status
- released
- Description
- Reference epigenome for human esophagus squamous epithelium (37 year old male)
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, DNase-seq, small RNA-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, POLR2A, H3K4me3, CTCF
- Biosample summary
- Homo sapiens esophagus squamous epithelium tissue male adult (37 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR284DRW
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR079NLY | ChIP-seq | H3K36me3 | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR143XNJ | ChIP-seq | H3K27ac | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR153AXQ | ChIP-seq | H3K9me3 | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR156UQO | ChIP-seq | POLR2A | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR289GGY | small RNA-seq | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR354QPN | RNA-seq | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR706KWR | ChIP-seq | H3K4me1 | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR731QXN | ChIP-seq | H3K4me3 | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR783OCW | DNase-seq | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR838RUX | ChIP-seq | CTCF | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR952BJX | ChIP-seq | H3K27me3 | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR156WTZ | input library | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR253FAH | input library | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR783XDX | input library | Homo sapiens esophagus squamous epithelium tissue male adult (37 years) | Michael Snyder, Stanford | released |