Experiment summary for ENCSR604WXQ
doi:10.17989/ENCSR604WXQ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- MSX2
- Biosample summary
- Homo sapiens MCF-7 genetically modified (insertion) using CRISPR targeting H. sapiens MSX2
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-MSX2 ChIP-seq on human MCF-7
- Nucleic acid type
- DNA
- Size range
- 250-450
- Fragmentation methods
- sonication (Bioruptor Pico)
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:pCS-181, michael-snyder:pCS-eGFP-MSX2 MCF-7 ChIP
- Date submitted
- January 17, 2019
- Date released
- July 16, 2020
- Annotation (gkmsvm-model)
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
1 | 1 | Homo sapiens MCF-7 cell line genetically modified (insertion) using CRISPR targeting H. sapiens MSX2 | ENCBS970SPN | ENCGM388GHO | ENCAB728YTO | ENCLB185NBE |
2 | 1 | Homo sapiens MCF-7 cell line genetically modified (insertion) using CRISPR targeting H. sapiens MSX2 | ENCBS400CEG | ENCGM388GHO | ENCAB728YTO | ENCLB014RGN |