Experiment summary for ENCSR604WXQ

doi:10.17989/ENCSR604WXQ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
MSX2
Biosample summary
Homo sapiens MCF-7 genetically modified (insertion) using CRISPR targeting H. sapiens MSX2
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-MSX2 ChIP-seq on human MCF-7
Nucleic acid type
DNA
Size range
250-450
Fragmentation methods
sonication (Bioruptor Pico)

Attribution

ENCODE4 project
Lab
Michael Snyder, Stanford
Award
UM1HG009442 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:pCS-181, michael-snyder:pCS-eGFP-MSX2 MCF-7 ChIP
Date submitted
January 17, 2019
Date released
July 16, 2020
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag RegulomeDB_2_1

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens MCF-7 cell line genetically modified (insertion) using CRISPR targeting H. sapiens MSX2ENCBS970SPNENCGM388GHOENCAB728YTOENCLB185NBE
21Homo sapiens MCF-7 cell line genetically modified (insertion) using CRISPR targeting H. sapiens MSX2ENCBS400CEGENCGM388GHOENCAB728YTOENCLB014RGN