Experiment summary for ENCSR146NLL

doi:10.17989/ENCSR146NLL

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
REPIN1
Biosample summary
Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-REPIN1 ChIP-seq on human HEK293 cells.
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:HEK_eGFP-REPIN1_FRT_ChIP
Date submitted
December 5, 2014
Date released
March 7, 2017
Annotation (gkmsvm-model)
Submitter comment
The archived libraries sequenced on HiSeq 2000 did not meet ENCODE read depth requirements. We have therefore provided more deeply sequenced data.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1ENCBS440JWNENCGM057AJSENCAB976SGGENCLB196JIW
21Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1ENCBS313ZXJENCGM057AJSENCAB976SGGENCLB731NAM
31Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1ENCBS430QMHENCGM057AJSENCAB976SGGENCLB650WFT