Experiment summary for ENCSR000EOQ

doi:10.17989/ENCSR000EOQ

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens endothelial cell of umbilical vein newborn
Biosample Type
primary cell
Replication type
isogenic
Description
DNase-seq and DGF on human endothelial cell of umbilical vein
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
May 4, 2011
Date released
May 4, 2011
Reference Epigenome
ENCSR194DQD 
Annotation (gkmsvm-model)
Submitter comment
As of August 2022, the donors associated with the biosamples in this dataset were changed from ENCDO000AAS to ENCDO466MPW and ENCDO560UMK. See PMID:32728101.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens newborn endothelial of umbilical vein primary cellENCBS112ENCENCLB533ZZZ
21Homo sapiens newborn endothelial of umbilical vein primary cellENCBS124GGKENCLB534ZZZ